BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012044
(472 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225463572|ref|XP_002270172.1| PREDICTED: F-box/LRR-repeat protein 14 [Vitis vinifera]
gi|297743556|emb|CBI36423.3| unnamed protein product [Vitis vinifera]
Length = 578
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/503 (75%), Positives = 429/503 (85%), Gaps = 31/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
MLPRDISQQIFNELV+S+CLT+VSL+AF+DCALQD+ LG+YPGV+D WMDVI+SQG SLL
Sbjct: 76 MLPRDISQQIFNELVFSQCLTDVSLKAFQDCALQDIYLGEYPGVSDSWMDVISSQGVSLL 135
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVDLSGS++T+SGLIHLKDC+NLQ+L+ N+C QISD GL+H+ GLSNLT+LSFRRNNAIT
Sbjct: 136 SVDLSGSEITNSGLIHLKDCTNLQALNLNYCDQISDHGLKHISGLSNLTTLSFRRNNAIT 195
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
AQGM AF+ L+NLVKLDLERC IHGGL++LKGL KLESLNI C+CITD+D+KPLSGLT
Sbjct: 196 AQGMSAFSSLVNLVKLDLERCPGIHGGLIHLKGLTKLESLNINMCHCITDADLKPLSGLT 255
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NLK L+IS SKVTD G+AYLKGL KL LLN+EGCPVTAACL+SLS L SL LNLNR L
Sbjct: 256 NLKGLEISRSKVTDDGVAYLKGLHKLALLNMEGCPVTAACLESLSDLPSLLSLNLNRSML 315
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
SDDGCE F++ +L+VLNLGFN++TD CLVHLKGLTNLESLNLDSC I DEGL NLTGL
Sbjct: 316 SDDGCENFARQENLRVLNLGFNDLTDACLVHLKGLTNLESLNLDSCRICDEGLANLTGLR 375
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
+LKCLELSDT+VGS+GLRHLSGL NLESINLSFT ++D LRKL+ LSSLKSLNLDARQI
Sbjct: 376 HLKCLELSDTEVGSNGLRHLSGLANLESINLSFTAVTDSGLRKLSALSSLKSLNLDARQI 435
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------- 411
TD GLAALTSLTGLTHLDLFGARITDSG +YLRNFKNL+SLEICGGGLTDA
Sbjct: 436 TDAGLAALTSLTGLTHLDLFGARITDSGTSYLRNFKNLQSLEICGGGLTDAGVKNIKDLT 495
Query: 412 ----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
GLT LVSL+VSNSRIT+AGL+HLK LKNL+SLTL+SCK
Sbjct: 496 CLTVLNLSQNCNLTDKSLELISGLTALVSLSVSNSRITNAGLQHLKQLKNLKSLTLDSCK 555
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
VT NDIK+LQS+DLPNLVSFRPE
Sbjct: 556 VTVNDIKKLQSKDLPNLVSFRPE 578
>gi|449436168|ref|XP_004135866.1| PREDICTED: F-box/LRR-repeat protein 14-like [Cucumis sativus]
gi|449509305|ref|XP_004163550.1| PREDICTED: F-box/LRR-repeat protein 14-like [Cucumis sativus]
Length = 578
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/503 (73%), Positives = 422/503 (83%), Gaps = 31/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
MLPRD+SQ I NELVYS+ LT++S++AFRDCALQDL G+ PGVND W+DVI+SQGSS+L
Sbjct: 76 MLPRDLSQLILNELVYSQLLTDISIQAFRDCALQDLHFGECPGVNDAWIDVISSQGSSVL 135
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVDLSGS+VTDSGL++L++CSNLQSL+ NFC ISD GL H+ G S LTSLSFR+N+ IT
Sbjct: 136 SVDLSGSEVTDSGLMNLRNCSNLQSLNLNFCEHISDRGLAHIGGFSRLTSLSFRKNSEIT 195
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
AQGM FA L+NL++LDLE+C IHGGLV+L+GL KLESLNIKWCNCITDSD+KPLSGLT
Sbjct: 196 AQGMSVFAHLVNLIRLDLEKCPGIHGGLVHLQGLRKLESLNIKWCNCITDSDIKPLSGLT 255
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NLK LQISCSKVTD+GIAYLKGL KL+LLNLEGCPVTAACL +LSALG+L YLNL+RC +
Sbjct: 256 NLKGLQISCSKVTDAGIAYLKGLHKLSLLNLEGCPVTAACLYTLSALGALQYLNLSRCHI 315
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
+DDG E+FS +G+LK+LNLGFN+ITDECLVHLKGLTNLESLNLDSC I D+GLVNL L
Sbjct: 316 TDDGSEQFSGLGALKILNLGFNDITDECLVHLKGLTNLESLNLDSCRIEDDGLVNLKALH 375
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
LKCLELSDT VGS+GLRHLSGL NLE +NLSFT ++D L+KL+GLSSLKSLNLD RQI
Sbjct: 376 RLKCLELSDTDVGSNGLRHLSGLFNLEKLNLSFTVVTDIGLKKLSGLSSLKSLNLDTRQI 435
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------- 411
TD GLA+LT L GLTHLDLFGARITDSG YLRNFKNL+SLEICGGGLTDA
Sbjct: 436 TDIGLASLTGLVGLTHLDLFGARITDSGTNYLRNFKNLQSLEICGGGLTDAGVKNIKDLS 495
Query: 412 ----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
GLTGLVSLN+SNSRITSAGLRHLK LKNL+ LTLE+C+
Sbjct: 496 SLMVLNLSQNGNLTDKSLELISGLTGLVSLNISNSRITSAGLRHLKTLKNLKQLTLEACR 555
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
V+A+DIK+LQS DLPNLVSFRPE
Sbjct: 556 VSASDIKKLQSTDLPNLVSFRPE 578
>gi|359484681|ref|XP_002262830.2| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Vitis vinifera]
gi|296084545|emb|CBI25566.3| unnamed protein product [Vitis vinifera]
Length = 578
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/503 (70%), Positives = 412/503 (81%), Gaps = 31/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
MLPRDISQQIF+ V S CLT SLEAFRDCA+QD+ LG+YP VND WMD+I+SQG SLL
Sbjct: 76 MLPRDISQQIFDNFVDSHCLTSASLEAFRDCAIQDVNLGEYPEVNDSWMDIISSQGLSLL 135
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVDLSGS VTD GL LKDCSN+Q L FN+C QIS+ GL+++ GLSNLTSLSF+++N +T
Sbjct: 136 SVDLSGSSVTDDGLSLLKDCSNIQVLSFNYCDQISEPGLKNISGLSNLTSLSFKKSNTVT 195
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
A+GM+AF+ L+NL KLDLERC+RIHGGL++LKGL KLESLNI++C CITDSD+K LSGLT
Sbjct: 196 AEGMRAFSSLVNLAKLDLERCSRIHGGLIHLKGLTKLESLNIRYCKCITDSDLKALSGLT 255
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
+LK LQ+SCS +TD GI+YLKGL KL LL++EGC VT +CLDSLSAL +L YLNLNRC L
Sbjct: 256 SLKELQMSCSNITDIGISYLKGLCKLMLLDVEGCHVTTSCLDSLSALVALSYLNLNRCGL 315
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
SD GCEKFS + +LKVLN+GFN ITD CLVHLKGLTNLESLNLDSC I DEGL NLTGL
Sbjct: 316 SDVGCEKFSGLKNLKVLNMGFNNITDACLVHLKGLTNLESLNLDSCSIEDEGLANLTGLS 375
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
LKCLELSDT+VGS+GL HLSGLT LES+NLSFT ++D L+KL GL+SLKSLNLDARQI
Sbjct: 376 LLKCLELSDTKVGSNGLCHLSGLTKLESLNLSFTLVTDSGLKKLCGLTSLKSLNLDARQI 435
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------- 411
TD GLAA+TSLTGLTHLDLFGARI+D+G LR+FKNL++LEICGGGLTDA
Sbjct: 436 TDAGLAAITSLTGLTHLDLFGARISDAGTNCLRHFKNLQTLEICGGGLTDAGVKNIKGLA 495
Query: 412 ----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
GLT LVSLNVSNSRIT+ GL+HLKPLKNL SL+LESCK
Sbjct: 496 SLTLLNLSQNCNLTDKTLEMISGLTALVSLNVSNSRITNNGLQHLKPLKNLLSLSLESCK 555
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
VTA++I++LQS LPNLVSFRPE
Sbjct: 556 VTASEIRKLQSTALPNLVSFRPE 578
>gi|356519276|ref|XP_003528299.1| PREDICTED: F-box/LRR-repeat protein 14-like isoform 1 [Glycine max]
Length = 577
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/502 (74%), Positives = 411/502 (81%), Gaps = 31/502 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
MLPRDISQ IFN LVYSR LT SLEAFRDCALQDL LG+Y GVND WM VI+SQGSSLL
Sbjct: 75 MLPRDISQLIFNNLVYSRRLTSASLEAFRDCALQDLYLGEYDGVNDNWMGVISSQGSSLL 134
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVDLSGSDVTD GL +LKDC +L SL+ N+C QISD GLE + GLSNLTSLSFRRN++I+
Sbjct: 135 SVDLSGSDVTDFGLTYLKDCESLISLNLNYCDQISDRGLECISGLSNLTSLSFRRNDSIS 194
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
AQGM AF+GL+NLVKLDLERC IHGGLV+L+GL KLESLN+KWCNCITD DMKPLS L
Sbjct: 195 AQGMSAFSGLVNLVKLDLERCPGIHGGLVHLRGLTKLESLNLKWCNCITDYDMKPLSELA 254
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
+LKSL+IS SKVTD GI++LKGLQKL LLNLEGC VTAACLDSL+ L +L LNLNRC L
Sbjct: 255 SLKSLEISSSKVTDFGISFLKGLQKLALLNLEGCLVTAACLDSLAELPALSNLNLNRCNL 314
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
SD+GC+K S++ +LKVLNLGFN ITD CLVHLKGLT LESLNLDSC IGDEGLVNL GL
Sbjct: 315 SDNGCKKISRLENLKVLNLGFNVITDACLVHLKGLTKLESLNLDSCKIGDEGLVNLAGLE 374
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
L CLELSDT+VGS+GL HLSGL++L+ INLSFT ISD SLRKL+GLSSLKSLNLDA QI
Sbjct: 375 QLNCLELSDTEVGSNGLHHLSGLSSLQKINLSFTMISDSSLRKLSGLSSLKSLNLDAYQI 434
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------- 411
TD GLA LTSLTGLT LDLFGARITD G YL+ FKNLRSLEICGG LTDA
Sbjct: 435 TDAGLANLTSLTGLTDLDLFGARITDFGTNYLKKFKNLRSLEICGGVLTDAGVKNIKELS 494
Query: 412 ----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
GLTGLVSLNVSNSRIT+AGL+HLK LKNLRSLTLESCK
Sbjct: 495 SLVCLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRITNAGLQHLKTLKNLRSLTLESCK 554
Query: 450 VTANDIKRLQSRDLPNLVSFRP 471
VTANDIK+L+S LPNLVSFRP
Sbjct: 555 VTANDIKKLKSIYLPNLVSFRP 576
>gi|297844484|ref|XP_002890123.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335965|gb|EFH66382.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 578
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/503 (71%), Positives = 421/503 (83%), Gaps = 32/503 (6%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLS 61
LPRDISQQIF+ELVYS+ LT SLEAFRDCA+QDLCLG+YPGVND WMDVI+SQ +SLLS
Sbjct: 76 LPRDISQQIFDELVYSQRLTLKSLEAFRDCAIQDLCLGEYPGVNDDWMDVISSQSTSLLS 135
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
VD SGSD+TDSGL+ LK C+NL+SL+FNFC QIS+ GLEHL GLSNLTSLSFRRN AITA
Sbjct: 136 VDFSGSDITDSGLVSLKGCTNLESLNFNFCDQISNRGLEHLSGLSNLTSLSFRRNAAITA 195
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
QGM+A + L+N+ KLDLE+C IHGGLV+L+GL KLESLNIKWCNCITD+DM+PLS LTN
Sbjct: 196 QGMRALSNLVNMKKLDLEKCPGIHGGLVHLRGLTKLESLNIKWCNCITDADMEPLSELTN 255
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQL 240
L+SLQI CS++TD GI+YLKGL KL LLNLEGC VTAACLD+L+AL L +LNLNRC
Sbjct: 256 LRSLQICCSRITDIGISYLKGLNKLNLLNLEGCRHVTAACLDTLTALTGLMFLNLNRCNF 315
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
SD GCEKFS + +LK+LNLG N IT+ CLVHL+GLT LESLNLDSC IGDEGLV+L+G+
Sbjct: 316 SDSGCEKFSDLINLKILNLGMNSITNSCLVHLRGLTKLESLNLDSCRIGDEGLVHLSGML 375
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
LK LELSDT+VGS+GLRHLSGL+NLESINLSFT ++D LRKL+GL+SL++LNLDAR +
Sbjct: 376 ELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHV 435
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD---------- 410
TD GL+ALTSLTGLTHLDLFGARITDSG +LRN K L+SLEICGGGLTD
Sbjct: 436 TDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIKDLS 495
Query: 411 ---------------------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
+GLTGLVSLNVSNSR++S+GLRHLKPLKNLRSLTLESCK
Sbjct: 496 SLTLLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNLRSLTLESCK 555
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
++ANDI++LQ+ DLPNLV+FRPE
Sbjct: 556 LSANDIRKLQATDLPNLVNFRPE 578
>gi|357458869|ref|XP_003599715.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355488763|gb|AES69966.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 585
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/511 (70%), Positives = 401/511 (78%), Gaps = 39/511 (7%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
MLPRDISQQI N LVYSR LT SLEAFRDCALQDL LG+Y GV+D WMDVI+SQGSSLL
Sbjct: 75 MLPRDISQQILNNLVYSRRLTGDSLEAFRDCALQDLYLGEYAGVDDSWMDVISSQGSSLL 134
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVDLS SDVTD GL +L+DC +L SL+ N+C QISD GLE + GLSNLTSLSFRRN++I+
Sbjct: 135 SVDLSASDVTDFGLTYLQDCRSLISLNLNYCDQISDHGLECISGLSNLTSLSFRRNDSIS 194
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
AQGM AF+ L+NLVKLDLERC IHGG V+L+GL KLESLN+KWCNCITDSD+KPLS L
Sbjct: 195 AQGMSAFSRLVNLVKLDLERCPGIHGGTVHLQGLTKLESLNMKWCNCITDSDIKPLSELA 254
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA--------LGSLFY 232
+L SL+ISCSKVTD GI++L+GLQKL LLNLEGC VT+ACLDSLS L +L
Sbjct: 255 SLTSLEISCSKVTDFGISFLRGLQKLALLNLEGCLVTSACLDSLSGCHEHTIPKLPALSN 314
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
LNLNRC +SD GCE+FS++ LKVLNLGFN+I D CL H+KGLT LESLNLDSC IGDEG
Sbjct: 315 LNLNRCNISDRGCERFSRLEKLKVLNLGFNDIGDRCLAHMKGLTKLESLNLDSCKIGDEG 374
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
L NL G L CLELSDT+VG+ GL HLSGL++LE INLSFT +SD LRKL GLSSLKS
Sbjct: 375 LENLAGHKQLICLELSDTEVGNHGLEHLSGLSSLEKINLSFTVVSDSGLRKLCGLSSLKS 434
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD-- 410
LNLDA QITD GLA LTSLTGLT LDLFGARITD G YL+ FKNLRSLEIC GGLTD
Sbjct: 435 LNLDAYQITDAGLATLTSLTGLTDLDLFGARITDVGTNYLKKFKNLRSLEICSGGLTDAG 494
Query: 411 -----------------------------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLR 441
AGLT LVSLN+SN+RITSAGL+HLK LKNLR
Sbjct: 495 VKNIKELSSLMCLNLSQNSNLTDKTVELIAGLTALVSLNLSNTRITSAGLQHLKTLKNLR 554
Query: 442 SLTLESCKVTANDIKRLQSRDLPNLVSFRPE 472
SLTLESCKVTANDIK+ + LPNLVSFRPE
Sbjct: 555 SLTLESCKVTANDIKKFKLIHLPNLVSFRPE 585
>gi|30684506|ref|NP_563980.2| leucine-rich repeat-containing protein [Arabidopsis thaliana]
gi|23297087|gb|AAN13089.1| unknown protein [Arabidopsis thaliana]
gi|332191234|gb|AEE29355.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
Length = 585
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/503 (71%), Positives = 417/503 (82%), Gaps = 32/503 (6%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLS 61
LPRDISQQIF+ELVYS+ LT SLEAFRDCA+QDL LG+YPGVND WMDVI+SQ +SLLS
Sbjct: 83 LPRDISQQIFDELVYSQRLTLKSLEAFRDCAIQDLYLGEYPGVNDDWMDVISSQSTSLLS 142
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
VD SGSD+TDSGL+ LK C+NL+SL+FNFC QIS+ GL HL GLSNLTSLSFRRN AITA
Sbjct: 143 VDFSGSDITDSGLVSLKGCTNLESLNFNFCDQISNRGLVHLSGLSNLTSLSFRRNAAITA 202
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
QGM+A + L+NL KLDLE+C I GGLV+L+ L KLESLNIKWCNCITD+DM+PLS LTN
Sbjct: 203 QGMRALSNLVNLKKLDLEKCPGIDGGLVHLRALTKLESLNIKWCNCITDADMEPLSVLTN 262
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQL 240
L+SLQI CSK+TD GI+YLKGL KL LLNLEGC VTAACLD+L+AL L YLNLNRC
Sbjct: 263 LRSLQICCSKITDIGISYLKGLNKLNLLNLEGCRHVTAACLDTLTALAGLMYLNLNRCNF 322
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
SD GCEKFS + +LK+LNLG N IT+ CLVHLKGLT LESLNLDSC IGDEGLV+L+G+
Sbjct: 323 SDSGCEKFSDLINLKILNLGMNNITNSCLVHLKGLTKLESLNLDSCRIGDEGLVHLSGML 382
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
LK LELSDT+VGS+GLRHLSGL+NLESINLSFT ++D LRKL+GL+SL++LNLDAR +
Sbjct: 383 ELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHV 442
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD---------- 410
TD GL+ALTSLTGLTHLDLFGARITDSG +LRN K L+SLEICGGGLTD
Sbjct: 443 TDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIKDLS 502
Query: 411 ---------------------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
+GLTGLVSLNVSNSR++S+GLRHLKPLKNLRSLTLESCK
Sbjct: 503 SLTLLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNLRSLTLESCK 562
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
++ANDI++LQ+ DLPNLV+FRPE
Sbjct: 563 LSANDIRKLQATDLPNLVNFRPE 585
>gi|388500850|gb|AFK38491.1| unknown [Medicago truncatula]
Length = 577
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/503 (70%), Positives = 396/503 (78%), Gaps = 31/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
MLPRDISQQI N LVYSR LT SLEAFRDCALQDL LG+Y GV+D WMDVI+SQGSSLL
Sbjct: 75 MLPRDISQQILNNLVYSRRLTGDSLEAFRDCALQDLYLGEYAGVDDSWMDVISSQGSSLL 134
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVDLS SDVTD GL +L+DC +L SL+ N+C QISD GLE + GLSNLTSLSFRRN++I+
Sbjct: 135 SVDLSASDVTDFGLTYLQDCRSLISLNLNYCDQISDHGLECISGLSNLTSLSFRRNDSIS 194
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
AQGM AF+ L+NLVKLDLERC IHGG V+L+GL KLESLN+KWCNCITDSD+KPLS L
Sbjct: 195 AQGMSAFSRLVNLVKLDLERCPGIHGGTVHLQGLTKLESLNMKWCNCITDSDIKPLSELA 254
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
+L SL+ISCSKVTD GI++L+GLQKL LLNLEGC VT+ACLDSLS L +L LNLNRC +
Sbjct: 255 SLTSLEISCSKVTDFGISFLRGLQKLALLNLEGCLVTSACLDSLSELPALSNLNLNRCNI 314
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
S GCE+FS++ LKVLNLGFN+I D CL H+KGLT LESLNLDSC IGDEGL NL G
Sbjct: 315 SGRGCERFSRLEKLKVLNLGFNDIGDRCLAHMKGLTKLESLNLDSCKIGDEGLENLAGHK 374
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
L CLELSDT+VG+ GL HLSGL++LE INLSFT +SD LRKL GLSSLKSLNLDA QI
Sbjct: 375 QLICLELSDTEVGNHGLEHLSGLSSLEKINLSFTVVSDSGLRKLCGLSSLKSLNLDAYQI 434
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD---------- 410
TD GLA LTSLTGLT LDLFGARITD G YL+ FKNLR LEIC GGLTD
Sbjct: 435 TDAGLATLTSLTGLTDLDLFGARITDVGTNYLKKFKNLRPLEICSGGLTDAGVKNIKELS 494
Query: 411 ---------------------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
AGLT LVSLN+SN+RIT AGL+HLK LKNLR LTLESCK
Sbjct: 495 SLMCLNLSQNSNLTDKTVELIAGLTALVSLNLSNTRITFAGLQHLKTLKNLRFLTLESCK 554
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
VT NDIK+ + LPNLVSFRPE
Sbjct: 555 VTVNDIKKFKLIHLPNLVSFRPE 577
>gi|224120462|ref|XP_002331054.1| predicted protein [Populus trichocarpa]
gi|222872984|gb|EEF10115.1| predicted protein [Populus trichocarpa]
Length = 576
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/503 (68%), Positives = 405/503 (80%), Gaps = 32/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
MLPRD+SQQIFNELV S LT SLEAFRDCALQD+ LG+YPGV D WMDVI+SQGSSLL
Sbjct: 75 MLPRDLSQQIFNELVISHSLTAASLEAFRDCALQDVLLGEYPGVMDSWMDVISSQGSSLL 134
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVDLS SDVTD+GL LKDCSNLQ++ N+C ISD GL+HL GL+N+TSLS +++ ++T
Sbjct: 135 SVDLSDSDVTDAGLGLLKDCSNLQAIALNYCNNISDNGLKHLSGLTNITSLSLKKSCSVT 194
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
A+GM+AF+ L+NL LD+ERC+ IHGGLV+LKGL KLESLNI+ C CITD DMK +SGLT
Sbjct: 195 AEGMRAFSTLLNLENLDMERCSGIHGGLVHLKGLKKLESLNIRCCKCITDMDMKAISGLT 254
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NLK LQIS + VTD G++YL+GLQKL +LNLEGC +T ACLDS+SAL +L YLNLNRC L
Sbjct: 255 NLKELQISNTNVTDVGVSYLRGLQKLIMLNLEGCNITTACLDSISALATLAYLNLNRCHL 314
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
DDGC+KFS + +LKVL+L FN++TD CLVHLKGL NLESLNLDSC IGDEG+ NL GL
Sbjct: 315 PDDGCDKFSGLKNLKVLSLAFNDVTDACLVHLKGLKNLESLNLDSCRIGDEGIANLAGL- 373
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
LK LELSDT VGSSGLRHLSG+ +LE++NLSFT ++DG LRKL+GL+SL+SLNLDARQI
Sbjct: 374 PLKSLELSDTIVGSSGLRHLSGIPHLENLNLSFTLVTDGGLRKLSGLTSLRSLNLDARQI 433
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------- 411
TD GL ALTSLTGLT LDLFGARITDSG L+ FKNL+SLEICGGGLTDA
Sbjct: 434 TDAGLTALTSLTGLTRLDLFGARITDSGTNCLKYFKNLKSLEICGGGLTDAGVKNIKDLV 493
Query: 412 ----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
GLT LVSLNVSNS IT+ GLR+LKPLKNLR+LTLESCK
Sbjct: 494 HLTVLNLSQNTNLTDKTLELISGLTELVSLNVSNSLITNEGLRYLKPLKNLRALTLESCK 553
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
VTA++IK+LQS +LPNL S RPE
Sbjct: 554 VTASEIKKLQSTELPNLASVRPE 576
>gi|182407840|gb|ACB87911.1| F-box-containing protein 1 [Malus x domestica]
Length = 580
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/503 (69%), Positives = 418/503 (83%), Gaps = 31/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
MLPRD+SQQIFNELV S LT+VSLEAFRDCAL+D+ LG+YP V D WM VI+SQGSSLL
Sbjct: 78 MLPRDVSQQIFNELVCSNSLTDVSLEAFRDCALEDIGLGEYPDVKDSWMGVISSQGSSLL 137
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVDLSGS+VTDSGL LK CSNLQ+L +N+C +S+ GL+H+ GLSNLTSLSF+R++AI+
Sbjct: 138 SVDLSGSEVTDSGLALLKGCSNLQALAYNYCDHVSEQGLKHISGLSNLTSLSFKRSDAIS 197
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
A+GM+AF+GL+NL KLDLERC+ IHGG V+LKGL KL+SLN++ C CITDSD+K +SGL
Sbjct: 198 AEGMRAFSGLLNLEKLDLERCSAIHGGFVHLKGLKKLKSLNVRCCRCITDSDLKTISGLI 257
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
+L LQ+S +TDSGI+YLKGL KL +LNLEGC VTA+CL S+SAL +L YLNLNRC L
Sbjct: 258 DLNELQLSNCNITDSGISYLKGLHKLRMLNLEGCNVTASCLQSISALVALAYLNLNRCSL 317
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
SD+GC+KFS + +LKVL+LGFNEITD CL++LKGLT+LESLNLDSC IGDEGL NL GL
Sbjct: 318 SDEGCDKFSGLTNLKVLSLGFNEITDACLMYLKGLTSLESLNLDSCKIGDEGLANLAGLT 377
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
+LK LELSDT+VGS+GLRHLSGL NLES+NLSFT ++D SL++L+GL+SLKSLNLDARQI
Sbjct: 378 HLKNLELSDTEVGSNGLRHLSGLKNLESLNLSFTLVTDSSLKRLSGLTSLKSLNLDARQI 437
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------- 411
TD GLAA+TSLTGLTHLDLFGARI+DSGA +L+ FKNL+SLEICGGGLTDA
Sbjct: 438 TDAGLAAITSLTGLTHLDLFGARISDSGANHLKYFKNLQSLEICGGGLTDAGVKNIKDLV 497
Query: 412 ----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
GLT LVSLNVSNSRIT+ GL+HLKPLKNLRSLTLESCK
Sbjct: 498 CLTWLNISQNCNLTNKSLELISGLTALVSLNVSNSRITNEGLQHLKPLKNLRSLTLESCK 557
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
VTA++I++LQS LPNLVSFRPE
Sbjct: 558 VTASEIRKLQSDALPNLVSFRPE 580
>gi|13507547|gb|AAK28636.1|AF360339_1 unknown protein [Arabidopsis thaliana]
Length = 585
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/503 (71%), Positives = 416/503 (82%), Gaps = 32/503 (6%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLS 61
LPRDISQQIF+ELVYS+ LT SLEAFRDCA+QDL LG+YPGVND WMDVI+SQ +SLLS
Sbjct: 83 LPRDISQQIFDELVYSQRLTLKSLEAFRDCAIQDLYLGEYPGVNDDWMDVISSQSTSLLS 142
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
VD SGSD+TDSGL+ LK C+NL+SL+FNFC QIS+ GL HL GLSNLTSLSFRRN AITA
Sbjct: 143 VDFSGSDITDSGLVSLKGCTNLESLNFNFCDQISNRGLVHLSGLSNLTSLSFRRNAAITA 202
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
QGM+A + L+NL KLDLE+C I GGLV+L+ L KLESLNIKWCNCITD+DM+PLS LTN
Sbjct: 203 QGMRALSNLVNLKKLDLEKCPGIDGGLVHLRALTKLESLNIKWCNCITDADMEPLSVLTN 262
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQL 240
L+ LQI CSK+TD GI+YLKGL KL LLNLEGC VTAACLD+L+AL L YLNLNRC
Sbjct: 263 LRRLQICCSKITDIGISYLKGLNKLNLLNLEGCRHVTAACLDTLTALAGLMYLNLNRCNF 322
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
SD GCEKFS + +LK+LNLG N IT+ CLVHLKGLT LESLNLDSC IGDEGLV+L+G+
Sbjct: 323 SDSGCEKFSDLINLKILNLGMNNITNSCLVHLKGLTKLESLNLDSCRIGDEGLVHLSGML 382
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
LK LELSDT+VGS+GLRHLSGL+NLESINLSFT ++D LRKL+GL+SL++LNLDAR +
Sbjct: 383 ELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHV 442
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD---------- 410
TD GL+ALTSLTGLTHLDLFGARITDSG +LRN K L+SLEICGGGLTD
Sbjct: 443 TDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIKDLS 502
Query: 411 ---------------------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
+GLTGLVSLNVSNSR++S+GLRHLKPLKNLRSLTLESCK
Sbjct: 503 SLTLLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNLRSLTLESCK 562
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
++ANDI++LQ+ DLPNLV+FRPE
Sbjct: 563 LSANDIRKLQATDLPNLVNFRPE 585
>gi|357468127|ref|XP_003604348.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355505403|gb|AES86545.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 573
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/505 (70%), Positives = 395/505 (78%), Gaps = 39/505 (7%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
MLPRDISQQI N LVYSR LT SLEAFRDCALQDL LG+Y GV+D WMDVI+SQGSSLL
Sbjct: 75 MLPRDISQQILNNLVYSRRLTGDSLEAFRDCALQDLYLGEYAGVDDSWMDVISSQGSSLL 134
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC--IQISDGGLEHLRGLSNLTSLSFRRNNA 118
SVDLS SDVTD GL +L+DC +L SL+ N+C QI D L SNLTSLSFRRN++
Sbjct: 135 SVDLSASDVTDFGLTYLQDCRSLISLNLNYCDKFQIMDWSL------SNLTSLSFRRNDS 188
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
I+AQGM AF+ L+NLVKLDLERC IHGG V+L+GL KLESLN+KWCNCITDSD+KPLS
Sbjct: 189 ISAQGMSAFSRLVNLVKLDLERCPGIHGGTVHLQGLTKLESLNMKWCNCITDSDIKPLSE 248
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
L +L SL+ISCSKVTD GI++L+GLQKL LLNLEGC VT+ACLDSLS L +L LNLNRC
Sbjct: 249 LASLTSLEISCSKVTDFGISFLRGLQKLALLNLEGCLVTSACLDSLSELPALSNLNLNRC 308
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
+SD GCE+FS++ LKVLNLGFN+I D CL H+KGLT LESLNLDSC IGDEGL NL G
Sbjct: 309 NISDRGCERFSRLEKLKVLNLGFNDIGDRCLAHMKGLTKLESLNLDSCKIGDEGLENLAG 368
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L CLELSDT+VG+ GL HLSGL++LE INLSFT +SD LRKL GLSSLKSLNLDA
Sbjct: 369 HKQLICLELSDTEVGNHGLEHLSGLSSLEKINLSFTVVSDSGLRKLCGLSSLKSLNLDAY 428
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD-------- 410
QITD GLA LTSLTGLT LDLFGARITD G YL+ FKNLRSLEIC GGLTD
Sbjct: 429 QITDAGLATLTSLTGLTDLDLFGARITDVGTNYLKKFKNLRSLEICSGGLTDAGVKNIKE 488
Query: 411 -----------------------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 447
AGLT LVSLN+SN+RITSAGL+HLK LKNLRSLTLES
Sbjct: 489 LSSLMCLNLSQNSNLTDKTVELIAGLTALVSLNLSNTRITSAGLQHLKTLKNLRSLTLES 548
Query: 448 CKVTANDIKRLQSRDLPNLVSFRPE 472
CKVTANDIK+ + LPNLVSFRPE
Sbjct: 549 CKVTANDIKKFKLIHLPNLVSFRPE 573
>gi|356550632|ref|XP_003543689.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
Length = 565
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 342/512 (66%), Positives = 391/512 (76%), Gaps = 41/512 (8%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPG----------VNDKWMDV 51
LP D+SQ+IFN +VYS LT SL+ FRD ALQD+CLG+Y V+D WMDV
Sbjct: 54 LPPDLSQRIFNNMVYSSYLTPASLQPFRDSALQDICLGEYEYANGGGAAAAIVDDAWMDV 113
Query: 52 IASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSL 111
I+SQGSSLL +DLS SDVTD GL L C+N+ SL+ N C QISD GLE + GLSNL SL
Sbjct: 114 ISSQGSSLLHLDLSASDVTDHGLTFLGHCTNIISLNLNHCHQISDHGLECISGLSNLASL 173
Query: 112 SFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDS 171
SFRRN AI+AQG+ F+GLINLVKLDLERC IHG LV+++GL LESLN+ WCNC+ D
Sbjct: 174 SFRRNYAISAQGLNTFSGLINLVKLDLERCPGIHGSLVHIQGLTMLESLNLNWCNCLVDV 233
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
DMKPLS LTNLKSL+IS +KVTD GI++LKGLQKL LLNLEGC VT ACLDSL L +L
Sbjct: 234 DMKPLSVLTNLKSLEISFNKVTDFGISFLKGLQKLNLLNLEGCQVTTACLDSLEELPALS 293
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
LNL+RC LS+DGCEKFS++ +LKVLNLGFN+ITD CL HLKGLT L+SLNLDSC I DE
Sbjct: 294 NLNLSRCNLSNDGCEKFSRLENLKVLNLGFNDITDACLAHLKGLTKLKSLNLDSCRIEDE 353
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
GLV+L G L CLELSDT +GS+GL HLSGL+NLE INLSFT ++D L KL GLSSLK
Sbjct: 354 GLVHLAGHQQLNCLELSDTGIGSNGLHHLSGLSNLEKINLSFTFVNDSGLSKLCGLSSLK 413
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD- 410
SLNLDARQ+TDTGLA+LTSLTGLT LDLFGARITD G YL+ FKNLR LEICGG LTD
Sbjct: 414 SLNLDARQVTDTGLASLTSLTGLTELDLFGARITDFGTNYLKCFKNLRLLEICGGELTDD 473
Query: 411 ------------------------------AGLTGLVSLNVSNSRITSAGLRHLKPLKNL 440
+GLT L+SLNVSNS IT+AGL+HLK LKNL
Sbjct: 474 GVKNIKELSSLKSLNLSQNCNLTDTTLELISGLTDLISLNVSNSGITNAGLQHLKTLKNL 533
Query: 441 RSLTLESCKVTANDIKRLQSRDLPNLVSFRPE 472
RSL+LESCKVTAN IK+LQS DLPNLVSFRP+
Sbjct: 534 RSLSLESCKVTANGIKKLQSTDLPNLVSFRPQ 565
>gi|356562920|ref|XP_003549716.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
Length = 580
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 331/503 (65%), Positives = 389/503 (77%), Gaps = 31/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
+LPRDISQQIFNELV S CLT++SLEAFRDCALQD+ LG+Y GV+D WMDVI+SQG SLL
Sbjct: 78 ILPRDISQQIFNELVDSHCLTQLSLEAFRDCALQDIDLGEYVGVSDDWMDVISSQGLSLL 137
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVD+SGS VTD+GL LKDCSNLQ+L NFC Q S+ GL+H+ GLSNLTSLS R+++ +
Sbjct: 138 SVDVSGSQVTDNGLRFLKDCSNLQALTLNFCDQFSEYGLKHISGLSNLTSLSIRKSSTVK 197
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
GM+AF+ L NL KLDLERC+ IHGG V+LKGL KLE LNI C C+ DSDMK +S L
Sbjct: 198 PDGMRAFSNLFNLEKLDLERCSDIHGGFVHLKGLKKLEYLNIGCCKCVMDSDMKSISELI 257
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NLK LQIS S +TD GI YL+GL+ LT LN+EGC +TAACL+ + AL SL LNLNRC L
Sbjct: 258 NLKELQISNSSITDIGITYLRGLKMLTTLNVEGCNITAACLEFIHALASLACLNLNRCGL 317
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
SDDG EK S + +LK L+L FN ITD CLVHLKGLTNLE LNLD C IGD+GL NLTGL
Sbjct: 318 SDDGFEKISGLKNLKRLSLAFNRITDACLVHLKGLTNLEYLNLDYCRIGDDGLANLTGLT 377
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
LK L LSDT +G+SGLRH+SGL LE +NLSFT ++D L++L+GL+ LKSLNLDARQI
Sbjct: 378 LLKSLVLSDTDIGNSGLRHISGLKKLEDLNLSFTTVTDHGLKRLSGLTQLKSLNLDARQI 437
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------- 411
TD GLA LTSL+GL LDLFGARI+D+G +LR+FK L+SLEICGGGLTDA
Sbjct: 438 TDAGLANLTSLSGLIALDLFGARISDNGTTFLRSFKILQSLEICGGGLTDAGVKNIREIV 497
Query: 412 ----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
G+T L SLNVSNSRIT+ GLR+LKPLKNLR+LTLESCK
Sbjct: 498 SLTQLNLSQNCNLTDKTLELISGMTALRSLNVSNSRITNEGLRYLKPLKNLRTLTLESCK 557
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
VTA++IK+LQS DLPNL+SFRPE
Sbjct: 558 VTASEIKKLQSTDLPNLISFRPE 580
>gi|255583092|ref|XP_002532313.1| protein binding protein, putative [Ricinus communis]
gi|223527982|gb|EEF30065.1| protein binding protein, putative [Ricinus communis]
Length = 597
Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust.
Identities = 342/497 (68%), Positives = 397/497 (79%), Gaps = 32/497 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
MLPRD+SQQIFNELV S CLT+ +LEAFRDCALQD+ LG+YPGV D WMD+++SQGSSLL
Sbjct: 75 MLPRDLSQQIFNELVISHCLTDATLEAFRDCALQDILLGEYPGVKDSWMDIVSSQGSSLL 134
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVDLS SDVTD+GL L+ CS+LQ++ N C IS+ GL+H+ GL NLTSLSF+R NA+T
Sbjct: 135 SVDLSDSDVTDTGLALLQACSSLQTMILNRCDCISECGLKHISGLKNLTSLSFKRCNAVT 194
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
A+GM+ F+ L+NL KLDLERC +IHGGL +LKGL+KLESLNI+ C CI D DMK LS +T
Sbjct: 195 AEGMRGFSSLVNLEKLDLERCPQIHGGLAHLKGLLKLESLNIRCCKCIEDMDMKALSDIT 254
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NLK LQIS S VTD G++YLKGLQKL +LNLEGC VT ACLDS+SAL +L YLNLNRC L
Sbjct: 255 NLKELQISNSNVTDLGVSYLKGLQKLIMLNLEGCNVTTACLDSISALVALTYLNLNRCNL 314
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
SDDGC KFS + +LKVL+LGFN ITD CLVHLKGL NLE+LNLDSC IGDEGL NLTGL
Sbjct: 315 SDDGCSKFSGLKNLKVLSLGFNNITDACLVHLKGLMNLENLNLDSCNIGDEGLANLTGL- 373
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
LK LELSDT+VGS+GLRHLSGLT LE++NLSFT ++D LR+L+GL SL+SLNLDARQI
Sbjct: 374 PLKSLELSDTEVGSNGLRHLSGLTLLENLNLSFTLVTDSGLRRLSGLLSLRSLNLDARQI 433
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD---------- 410
TD GLAALT LTGL HLDLFGARI+DSG YL+ FKNL+SLEICGGGLTD
Sbjct: 434 TDAGLAALTRLTGLIHLDLFGARISDSGTKYLQYFKNLQSLEICGGGLTDDGVKNIKDLV 493
Query: 411 ---------------------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
+GLT LVSLNVSNS IT+ GL +LKPLKNLRSL+LESCK
Sbjct: 494 HLTVLNLSQNSNLTDKTLELISGLTELVSLNVSNSLITNEGLHYLKPLKNLRSLSLESCK 553
Query: 450 VTANDIKRLQSRDLPNL 466
VTA++I +LQS LPNL
Sbjct: 554 VTASEISKLQSTALPNL 570
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 122/267 (45%), Gaps = 61/267 (22%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
+++TD+ L+HLK NL++L+ + C I D GL +L GL L SL + + + G++
Sbjct: 336 NNITDACLVHLKGLMNLENLNLDSC-NIGDEGLANLTGLP-LKSLELS-DTEVGSNGLRH 392
Query: 127 FAGL-----INL---------------------VKLDLERCTRIH-GGLVNLKGLMKLES 159
+GL +NL + LD + T L L GL+ L+
Sbjct: 393 LSGLTLLENLNLSFTLVTDSGLRRLSGLLSLRSLNLDARQITDAGLAALTRLTGLIHLDL 452
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL-EGCPVTA 218
+ I+DS K L NL+SL+I +TD G+ +K L LT+LNL + +T
Sbjct: 453 FGAR----ISDSGTKYLQYFKNLQSLEICGGGLTDDGVKNIKDLVHLTVLNLSQNSNLTD 508
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
L+ +S L L LN++ + IT+E L +LK L NL
Sbjct: 509 KTLELISGLTELVSLNVSN------------------------SLITNEGLHYLKPLKNL 544
Query: 279 ESLNLDSCGIGDEGLVNL--TGLCNLK 303
SL+L+SC + + L T L NLK
Sbjct: 545 RSLSLESCKVTASEISKLQSTALPNLK 571
>gi|356548547|ref|XP_003542662.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
Length = 578
Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust.
Identities = 331/503 (65%), Positives = 390/503 (77%), Gaps = 31/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
+LPRDISQQIFNELV S CLTEVSLEAFRDCALQD+ LG+Y GVND WMDVI+SQG SLL
Sbjct: 76 ILPRDISQQIFNELVDSHCLTEVSLEAFRDCALQDIDLGEYVGVNDDWMDVISSQGLSLL 135
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVD++GS VTD GL LKDCS+LQ+L ++C Q S+ GL+H+ GLSNLTSLS R+++++
Sbjct: 136 SVDVAGSQVTDDGLRLLKDCSSLQALTLSYCDQFSEYGLKHISGLSNLTSLSIRKSSSVK 195
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
GM+AF+ L NL KLDLERC+ IHGG V+LKGL KLE LNI C C+TDSD+K +S L
Sbjct: 196 PDGMRAFSNLFNLEKLDLERCSEIHGGFVHLKGLKKLEYLNIGCCKCVTDSDIKSISELI 255
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NLK LQIS S +TD GI YL+GL+KLT LN+EGC +TAACL+ + AL SL LNLNRC L
Sbjct: 256 NLKELQISNSSITDIGITYLRGLEKLTTLNVEGCNITAACLEFIHALTSLACLNLNRCGL 315
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
SDDG EK S + +LK L+L FN ITD CLVHLK LTNLE LNLDSC IGD GL NLTGL
Sbjct: 316 SDDGFEKISGLKNLKRLSLAFNRITDACLVHLKDLTNLEYLNLDSCRIGDGGLANLTGLT 375
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
LK L LSDT +G+SGLR++SGL LE +N+SFT ++D L++L+GL+ LKSLNLDARQI
Sbjct: 376 LLKSLVLSDTDIGNSGLRYISGLKKLEDLNVSFTTVTDNGLKRLSGLTQLKSLNLDARQI 435
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------- 411
TD GLA LTSL+GL LDLFGARI+D+G +LR+FKNL+SLEICGGGLTDA
Sbjct: 436 TDAGLANLTSLSGLITLDLFGARISDNGTTFLRSFKNLQSLEICGGGLTDAGVKNIREIV 495
Query: 412 ----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
G+T L SLNVSNSRIT+ GLRHLKPLKNLR+LTLESCK
Sbjct: 496 SLTQLNLSQNCNLTDKTLELISGMTALRSLNVSNSRITNEGLRHLKPLKNLRTLTLESCK 555
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
VTA+ IK+LQS DLPNL+SFRPE
Sbjct: 556 VTASGIKKLQSTDLPNLISFRPE 578
>gi|357164542|ref|XP_003580088.1| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Brachypodium distachyon]
Length = 580
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 332/503 (66%), Positives = 394/503 (78%), Gaps = 31/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
MLPRD+SQQIFNELV LTE SLEAFRDCALQD+CL +YPGV D WM+V+ASQG SLL
Sbjct: 78 MLPRDLSQQIFNELVEWSYLTEESLEAFRDCALQDICLEEYPGVKDAWMEVVASQGQSLL 137
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVD+S SDVTDSGL LKDCSN+QSL N+C QIS+ GL+ L GLSNLTSLS ++ A+T
Sbjct: 138 SVDISCSDVTDSGLDVLKDCSNMQSLACNYCDQISEHGLKTLSGLSNLTSLSLKKCAAVT 197
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
A+G KAFA L+NLV LDLERC +IHGGLV+LKGL KLE+LN+++CNCITDSDMK LS LT
Sbjct: 198 AEGAKAFADLVNLVNLDLERCPKIHGGLVHLKGLRKLETLNMRYCNCITDSDMKYLSDLT 257
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NL+ LQ+SC K++D G++YLKGL KL LNLEGC VTAACL+++S L SL LNLNRC +
Sbjct: 258 NLRELQLSCCKISDIGVSYLKGLSKLAHLNLEGCAVTAACLEAISGLASLILLNLNRCGI 317
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D+GCE + LKVLNLGFN ITD CLVHLK L +LE LNLDSC IGDEGL++L GL
Sbjct: 318 YDEGCENLEGLVKLKVLNLGFNHITDACLVHLKELVSLECLNLDSCKIGDEGLLHLKGLL 377
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
L+ LELSDT+VGS+GLRHLSGL NL+S+NLSFT ++D L+K+AGL+SLKSLNLD RQI
Sbjct: 378 QLRSLELSDTEVGSNGLRHLSGLRNLQSMNLSFTLVTDIGLKKVAGLNSLKSLNLDNRQI 437
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------- 411
TD GLAAL LTGLTHLDLFGARITDSG LR FK L+SLE+CGG +TDA
Sbjct: 438 TDNGLAALAGLTGLTHLDLFGARITDSGTNCLRYFKELQSLELCGGLITDAGVKNIKDLK 497
Query: 412 ----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
GLT LVSLN+SN+R+++AGL HLK L+NLRSL+L+SCK
Sbjct: 498 ALTLLNLSQNGNLTDRTLELISGLTALVSLNLSNTRVSNAGLHHLKLLQNLRSLSLDSCK 557
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
VTA++IK++Q LPNL+S RPE
Sbjct: 558 VTASEIKKIQLASLPNLISVRPE 580
>gi|116310796|emb|CAH67587.1| OSIGBa0112M24.4 [Oryza sativa Indica Group]
gi|218195159|gb|EEC77586.1| hypothetical protein OsI_16540 [Oryza sativa Indica Group]
Length = 581
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 327/503 (65%), Positives = 387/503 (76%), Gaps = 31/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
+LPRD+SQQ+FNELV LTE L AFRDCALQD+CL YPGV D WM+V ASQG SLL
Sbjct: 79 LLPRDLSQQVFNELVEWNILTEELLGAFRDCALQDICLADYPGVRDAWMEVAASQGQSLL 138
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVD+S SDVTD GL LKDC NLQSL N+C QIS+ GL+ L GLSN+TSLSF++ +A+T
Sbjct: 139 SVDISCSDVTDGGLNQLKDCINLQSLSCNYCDQISEHGLKTLSGLSNVTSLSFKKCSAVT 198
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
A+G KAFA ++NL LDLERC +IHGGLV+LKGL KLE LN+++CN ITDSDMK LS LT
Sbjct: 199 AEGAKAFANMVNLGSLDLERCPKIHGGLVHLKGLRKLEKLNLRYCNGITDSDMKHLSDLT 258
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NL+ LQ+SC K++D G++YL+GL KL LNLEGC VTAACL+ +S L SL LNL+RC +
Sbjct: 259 NLRELQLSCCKISDLGVSYLRGLSKLAHLNLEGCAVTAACLEVISGLASLVLLNLSRCGV 318
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D+GCE + LKVLNLGFN ITD CLVHLK L NLE LNLDSC IGDEGL +L GL
Sbjct: 319 YDEGCEHLEGLVKLKVLNLGFNYITDACLVHLKELINLECLNLDSCKIGDEGLAHLKGLL 378
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
L+ LELSDT+VGS+GLRHLSGL NL+SINLSFT ++D L+K++GL+SL+SLNLD RQI
Sbjct: 379 KLRSLELSDTEVGSNGLRHLSGLRNLQSINLSFTLVTDIGLKKISGLNSLRSLNLDNRQI 438
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------- 411
TD GLAALT LTGLTHLDLFGARITD+G L+ FKNL+SLE+CGG +TDA
Sbjct: 439 TDNGLAALTCLTGLTHLDLFGARITDAGTNCLKYFKNLQSLEVCGGLITDAGVKNIKDLK 498
Query: 412 ----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
GLT LVSLNVSNSR++++GL HLKPL+NLRSL+LESCK
Sbjct: 499 ALTLLNLSQNGNLTDKSLELISGLTALVSLNVSNSRVSNSGLHHLKPLQNLRSLSLESCK 558
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
VTA +IK+LQ LPNLVS RPE
Sbjct: 559 VTAIEIKKLQLAALPNLVSVRPE 581
>gi|357478391|ref|XP_003609481.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355510536|gb|AES91678.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 576
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 335/503 (66%), Positives = 390/503 (77%), Gaps = 31/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
+LPRDISQ IFNELV S CLTE SL AFRDCALQD+ LG+Y GVND WMDVIASQG SLL
Sbjct: 74 ILPRDISQLIFNELVESHCLTETSLNAFRDCALQDVYLGEYLGVNDGWMDVIASQGPSLL 133
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
+VD+SGS+VTD GL LKDC NLQ+L N+C Q S+ GL+HL GLSNLTSLS R++ A+T
Sbjct: 134 AVDVSGSNVTDHGLRLLKDCLNLQALTLNYCDQFSEHGLKHLSGLSNLTSLSIRKSCAVT 193
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
GM+AF+ L+NL KLDLERC+ IHGG V+ KGL KLESLNI C C+TDSDMK +SG
Sbjct: 194 PDGMRAFSNLVNLEKLDLERCSDIHGGFVHFKGLKKLESLNIGCCKCVTDSDMKAISGFI 253
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NLK LQIS S +TD GI+YL+GLQKL+ LN+EGC +TAAC + +SAL +L LNLNRC L
Sbjct: 254 NLKELQISNSSITDLGISYLRGLQKLSTLNVEGCSITAACFEYISALAALACLNLNRCGL 313
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
SDDG EKFS + LK L+L FN+ITD CLVHLKGLT LE LNLDSC IGDEGLVNLTGL
Sbjct: 314 SDDGFEKFSGLTGLKRLSLAFNKITDACLVHLKGLTKLEYLNLDSCQIGDEGLVNLTGLT 373
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
LK L LSDT+VG+SG+R++SGL LE +NLSFT ++D L++L GL++LKSLNLDARQI
Sbjct: 374 LLKSLVLSDTEVGNSGIRYISGLNKLEDLNLSFTSVTDNGLKRLLGLTNLKSLNLDARQI 433
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------- 411
TD GLA LTSL+GL LDLFGARITDSG YLR+FKNL+SLEICGG LTDA
Sbjct: 434 TDAGLANLTSLSGLITLDLFGARITDSGTTYLRSFKNLQSLEICGGLLTDAGVKNIREIV 493
Query: 412 ----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
G+T L SLNVSNSR+T+ GLR+LKPLKNLR+L+LESCK
Sbjct: 494 SLTQLNLSQNCKLTDKTLELISGMTALRSLNVSNSRVTNEGLRYLKPLKNLRTLSLESCK 553
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
V A DIK+L S DLPNL+SFRPE
Sbjct: 554 VNAADIKKLHSTDLPNLISFRPE 576
>gi|115459280|ref|NP_001053240.1| Os04g0503500 [Oryza sativa Japonica Group]
gi|113564811|dbj|BAF15154.1| Os04g0503500 [Oryza sativa Japonica Group]
gi|215678755|dbj|BAG95192.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708842|dbj|BAG94111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629150|gb|EEE61282.1| hypothetical protein OsJ_15365 [Oryza sativa Japonica Group]
Length = 581
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 327/503 (65%), Positives = 387/503 (76%), Gaps = 31/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
+LPRD+SQQ+FNELV LTE L AFRDCALQD+CL YPGV D WM+V ASQG SLL
Sbjct: 79 LLPRDLSQQVFNELVEWNILTEELLGAFRDCALQDICLADYPGVRDAWMEVAASQGQSLL 138
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVD+S SDVTD GL LKDC NLQSL N+C QIS+ GL+ L GLSN+TSLSF++ +A+T
Sbjct: 139 SVDISCSDVTDGGLNQLKDCINLQSLSCNYCDQISEHGLKTLSGLSNVTSLSFKKCSAVT 198
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
A+G KAFA ++NL LDLERC +IHGGLV+LKGL KLE LN+++CN ITDSDMK LS LT
Sbjct: 199 AEGAKAFANMVNLGSLDLERCPKIHGGLVHLKGLRKLEKLNLRYCNGITDSDMKHLSDLT 258
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NL+ LQ+SC K++D G++YL+GL KL LNLEGC VTAACL+ +S L SL LNL+RC +
Sbjct: 259 NLRELQLSCCKISDLGVSYLRGLSKLAHLNLEGCAVTAACLEVISGLASLVLLNLSRCGV 318
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D+GCE + LKVLNLGFN ITD CLVHLK L NLE LNLDSC IGDEGL +L GL
Sbjct: 319 YDEGCEHLEGLVKLKVLNLGFNYITDACLVHLKELINLECLNLDSCKIGDEGLAHLKGLL 378
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
L+ LELSDT+VGS+GLRHLSGL NL+SINLSFT ++D L+K++GL+SL+SLNLD RQI
Sbjct: 379 KLRSLELSDTEVGSNGLRHLSGLRNLQSINLSFTLVTDIGLKKISGLNSLRSLNLDNRQI 438
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG-------- 412
TD GLAALT LTGLTHLDLFGARITD+G L+ FKNL+SLE+CGG +TDAG
Sbjct: 439 TDNGLAALTCLTGLTHLDLFGARITDAGTNCLKYFKNLQSLEVCGGLITDAGVKNIKDLK 498
Query: 413 -----------------------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
LT LVSLNVSNSR++++GL HLKPL+NLRSL+LESCK
Sbjct: 499 ALTLLNLSQNGNLTDKSLELISRLTALVSLNVSNSRVSNSGLHHLKPLQNLRSLSLESCK 558
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
VTA +IK+LQ LPNLVS RPE
Sbjct: 559 VTAIEIKKLQLAALPNLVSVRPE 581
>gi|8927653|gb|AAF82144.1|AC034256_8 Contains similarity to F-box protein FBL2 from Homo sapiens
gb|AF176518 and contains multiple Leucine Rich PF|00560
repeats. ESTs gb|Z34572, gb|Z34571, gb|AI100681,
gb|AI100675, gb|AA395320, gb|AI100674, gb|AA651378,
gb|AA007067, gb|T46145, gb|T22090, gb|AI995016,
gb|H36884, gb|AI995066, gb|H37061, gb|T43537 come from
this gene [Arabidopsis thaliana]
Length = 568
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 343/510 (67%), Positives = 395/510 (77%), Gaps = 63/510 (12%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLS 61
LPRDISQQIF+ELVYS+ LT SLEAFRDCA+QDL LG+YPGVND WMDVI+SQ +SLLS
Sbjct: 83 LPRDISQQIFDELVYSQRLTLKSLEAFRDCAIQDLYLGEYPGVNDDWMDVISSQSTSLLS 142
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
VD SGSD+TDSGL+ LK C+NL+SL+FNFC QIS+ GL HL GLSNLTSLSFRRN AITA
Sbjct: 143 VDFSGSDITDSGLVSLKGCTNLESLNFNFCDQISNRGLVHLSGLSNLTSLSFRRNAAITA 202
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
QGM+A + L+NL KLDLE+C I GGLV+L+ L KLESLNIKWCNCITD+DM+P
Sbjct: 203 QGMRALSNLVNLKKLDLEKCPGIDGGLVHLRALTKLESLNIKWCNCITDADMEP------ 256
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLS-------ALGSLFYL 233
L GL KL LLNLEGC VTAACLD+L+ AL L YL
Sbjct: 257 ------------------LSGLNKLNLLNLEGCRHVTAACLDTLTGLYRHPHALAGLMYL 298
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
NLNRC SD GCEKFS + +LK+LNLG N IT+ CLVHLKGLT LESLNLDSC IGDEGL
Sbjct: 299 NLNRCNFSDSGCEKFSDLINLKILNLGMNNITNSCLVHLKGLTKLESLNLDSCRIGDEGL 358
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
V+L+G+ LK LELSDT+VGS+GLRHLSGL+NLESINLSFT ++D LRKL+GL+SL++L
Sbjct: 359 VHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTVVTDSGLRKLSGLTSLRTL 418
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD--- 410
NLDAR +TD GL+ALTSLTGLTHLDLFGARITDSG +LRN K L+SLEICGGGLTD
Sbjct: 419 NLDARHVTDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGV 478
Query: 411 ----------------------------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRS 442
+GLTGLVSLNVSNSR++S+GLRHLKPLKNLRS
Sbjct: 479 KNIKDLSSLTLLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNLRS 538
Query: 443 LTLESCKVTANDIKRLQSRDLPNLVSFRPE 472
LTLESCK++ANDI++LQ+ DLPNLV+FRPE
Sbjct: 539 LTLESCKLSANDIRKLQATDLPNLVNFRPE 568
>gi|115447277|ref|NP_001047418.1| Os02g0613200 [Oryza sativa Japonica Group]
gi|47497632|dbj|BAD19701.1| leucine-rich repeat-like protein [Oryza sativa Japonica Group]
gi|113536949|dbj|BAF09332.1| Os02g0613200 [Oryza sativa Japonica Group]
gi|125582867|gb|EAZ23798.1| hypothetical protein OsJ_07510 [Oryza sativa Japonica Group]
gi|215704406|dbj|BAG93840.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 582
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 322/503 (64%), Positives = 392/503 (77%), Gaps = 31/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
+LPRD+SQQIFNELV S LTE LE FRDCALQD+ LG+YPGVND WM+V+ASQ SLL
Sbjct: 80 VLPRDLSQQIFNELVASNRLTETLLETFRDCALQDIDLGEYPGVNDAWMEVVASQRHSLL 139
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVD+S S++TDSGL L+DC N+QSL N+C IS+ GL L GLSNLTSLSF+ ++ IT
Sbjct: 140 SVDISCSEITDSGLYLLRDCPNMQSLACNYCDMISEHGLGILSGLSNLTSLSFKSSDGIT 199
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
A+ M+AFA L+NLV LDLERC +IHGGLV+LKGL LESLN+++CN I DSD+K LS LT
Sbjct: 200 AEAMEAFANLVNLVNLDLERCLKIHGGLVHLKGLRNLESLNMRYCNNIADSDIKYLSDLT 259
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NLK LQ++C ++TD G++YL+GL KLT LNLEGCPVTAACL+++S L SL LNL+RC +
Sbjct: 260 NLKELQLACCRITDLGVSYLRGLSKLTQLNLEGCPVTAACLEAISGLASLVVLNLSRCGI 319
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
+GCE F + LKVLNLGFN ITD+CL HLK L NLESLNLDSC +GDEGL++L GL
Sbjct: 320 YGEGCENFQGLKKLKVLNLGFNNITDDCLAHLKELINLESLNLDSCKVGDEGLLHLRGLM 379
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
LK LELSDT+VGSSGL+HLSGL NLESINLSFT ++D ++K++ L+SLKS+NLD RQI
Sbjct: 380 LLKSLELSDTEVGSSGLQHLSGLRNLESINLSFTLVTDTGMKKISALNSLKSVNLDNRQI 439
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------- 411
TD GLAALTSLTGLTHLDLFGARITD G + R FKNL SLE+CGG +TDA
Sbjct: 440 TDVGLAALTSLTGLTHLDLFGARITDYGTSCFRFFKNLESLEVCGGLITDAGVKNIKDLK 499
Query: 412 ----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
GLT LVSLNVSN+R+++AGLRHLK L+NLRSL+L+SC+
Sbjct: 500 ALKQLNLSQNVNLTDKTLELISGLTALVSLNVSNTRVSNAGLRHLKDLQNLRSLSLDSCR 559
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
VT +++K+LQ+ LPNL+S RPE
Sbjct: 560 VTTSEVKKLQATVLPNLISVRPE 582
>gi|125540271|gb|EAY86666.1| hypothetical protein OsI_08050 [Oryza sativa Indica Group]
Length = 582
Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust.
Identities = 322/503 (64%), Positives = 391/503 (77%), Gaps = 31/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
+LPRD+SQQIFNELV S LTE LE F DCALQD+ LG+YPGVND WM+V+ASQ SLL
Sbjct: 80 VLPRDLSQQIFNELVASNRLTETLLETFWDCALQDIDLGEYPGVNDAWMEVVASQRHSLL 139
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVD+S S++TDSGL L+DC N+QSL N+C IS+ GL L GLSNLTSLSF+ ++ IT
Sbjct: 140 SVDISCSEITDSGLYLLRDCPNMQSLACNYCDMISEHGLGILSGLSNLTSLSFKSSDGIT 199
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
A+ M+AFA L+NLV LDLERC +IHGGLV+LKGL LESLN+++CN I DSD+K LS LT
Sbjct: 200 AEAMEAFANLVNLVNLDLERCLKIHGGLVHLKGLRNLESLNMRYCNNIADSDIKYLSDLT 259
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NLK LQ++C ++TD G++YL+GL KLT LNLEGCPVTAACL+++S L SL LNL+RC +
Sbjct: 260 NLKELQLACCRITDLGVSYLRGLSKLTQLNLEGCPVTAACLEAISGLASLVVLNLSRCGI 319
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
+GCE F + LKVLNLGFN ITD+CL HLK L NLESLNLDSC +GDEGL++L GL
Sbjct: 320 YGEGCENFQGLKKLKVLNLGFNNITDDCLAHLKELINLESLNLDSCKVGDEGLLHLRGLM 379
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
LK LELSDT+VGSSGL+HLSGL NLESINLSFT ++D ++K++ L+SLKS+NLD RQI
Sbjct: 380 LLKSLELSDTEVGSSGLQHLSGLRNLESINLSFTLVTDTGMKKISALNSLKSVNLDNRQI 439
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------- 411
TD GLAALTSLTGLTHLDLFGARITD G + R FKNL SLE+CGG +TDA
Sbjct: 440 TDVGLAALTSLTGLTHLDLFGARITDYGTSCFRFFKNLESLEVCGGLITDAGVKNIKDLK 499
Query: 412 ----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
GLT LVSLNVSN+RI++AGLRHLK L+NLRSL+L+SC+
Sbjct: 500 ALKQLNLSQNVNLTDKTLELISGLTALVSLNVSNTRISNAGLRHLKDLQNLRSLSLDSCR 559
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
VT +++K+LQ+ LPNL+S RPE
Sbjct: 560 VTTSEVKKLQATVLPNLISVRPE 582
>gi|357150116|ref|XP_003575347.1| PREDICTED: F-box/LRR-repeat protein 14-like [Brachypodium
distachyon]
Length = 582
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 319/503 (63%), Positives = 388/503 (77%), Gaps = 31/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
+LP D+SQQ+FN+LV S CL E SLE FRDCAL D+CLG++PGV D WM+V+ASQ SLL
Sbjct: 80 VLPSDLSQQVFNQLVDSNCLKEASLETFRDCALHDICLGEFPGVKDAWMEVVASQRQSLL 139
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVD+S S+VTDSGL L+DCSN+QSL N+C QIS+ GL L G SNLTSLSF+R++ +T
Sbjct: 140 SVDISCSEVTDSGLNLLRDCSNMQSLVCNYCDQISEHGLGVLSGFSNLTSLSFKRSDGVT 199
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
A+GM+ FA L+NLV LDLERC +IHGGLV+LKGL KLES+N+++CN ITDSD+K LS LT
Sbjct: 200 AEGMRVFANLVNLVNLDLERCLKIHGGLVHLKGLRKLESINMRYCNNITDSDIKYLSDLT 259
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NLK LQ+S ++TD G++YL+GL KL LNLE CPVTAACL +S L SL LNLNRC +
Sbjct: 260 NLKELQLSSCRITDLGVSYLRGLSKLIRLNLESCPVTAACLVDISGLASLMLLNLNRCGI 319
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D+GCE F + LKVLNLGFN ITD CLVHLK L NLE LNLDSC +GD GL++L GL
Sbjct: 320 YDEGCESFKDLKKLKVLNLGFNYITDACLVHLKELINLEFLNLDSCKVGDAGLLHLKGLV 379
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
LK LELSDT+VGS+GLRHLSGL L+ I+LSFT ++D ++K++ LSSLKS+NLD+R I
Sbjct: 380 LLKSLELSDTEVGSNGLRHLSGLRTLQRIDLSFTLVTDTGMKKISALSSLKSVNLDSRLI 439
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD---------- 410
TD GLAALT LTGLTHLDLFGARITD+GA+ R FKNL SLE CGG +TD
Sbjct: 440 TDVGLAALTGLTGLTHLDLFGARITDNGASCFRYFKNLESLEACGGSITDVGVKNIKELK 499
Query: 411 ---------------------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
+GLT LVSLNVSNSR+++AGLRHL L+NLRSLTL+SC+
Sbjct: 500 ALTLLNLSQNANLTDKTLELISGLTALVSLNVSNSRVSNAGLRHLNALQNLRSLTLDSCR 559
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
VTAN+I++LQ+ LPNL+SFRPE
Sbjct: 560 VTANEIRKLQATALPNLISFRPE 582
>gi|326497793|dbj|BAJ98524.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 583
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 318/503 (63%), Positives = 386/503 (76%), Gaps = 31/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
MLP DISQQIF+ELV S LTE SLE FRDCAL D+CLG+YPGV D WM+V+ASQ SLL
Sbjct: 81 MLPSDISQQIFDELVGSNRLTEESLETFRDCALHDICLGEYPGVTDAWMEVVASQRQSLL 140
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVD+S S+VTD GL L DCS++QSL N+C ++S+ G+ L G SNLTSLSF+R++ +T
Sbjct: 141 SVDISCSEVTDGGLNFLSDCSSMQSLSCNYCDRVSEHGIGVLSGFSNLTSLSFKRSDGVT 200
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
A+GM FA L+NLV LDLE C +IHGGLV++KGL KLESLN+++CN ITDSD+K LS LT
Sbjct: 201 AEGMSVFADLVNLVNLDLECCLKIHGGLVHMKGLRKLESLNMRYCNYITDSDIKYLSDLT 260
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NLK LQ+S ++TD G++YL GL KLT LNLE CPVTAACL+++S L SL LNLNRC +
Sbjct: 261 NLKELQLSSCRITDLGVSYLTGLSKLTHLNLESCPVTAACLEAISGLASLMLLNLNRCGI 320
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D+GCE F + LKVLNLGFN ITD CLVHLKGL NLESLNLDSC IGDEGL++L GL
Sbjct: 321 YDEGCESFEDLKKLKVLNLGFNHITDACLVHLKGLINLESLNLDSCKIGDEGLLHLKGLV 380
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
LK LELSDT +GS+GL+HLSGL NL SINLSFT ++D ++K++ L+SLKS+NLD R I
Sbjct: 381 LLKSLELSDTAIGSNGLQHLSGLRNLHSINLSFTLVTDTGMKKISTLNSLKSVNLDNRLI 440
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------- 411
TD GLAAL LTGLTHLDLFGAR+TD G ++LR FKNL SLE+CGG +TDA
Sbjct: 441 TDVGLAALIGLTGLTHLDLFGARVTDHGTSFLRYFKNLESLEVCGGSITDAGVKNIKDLK 500
Query: 412 ----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
GLT LVSLNVSNSR+++AG RHLK L+NLRSLTL+SC+
Sbjct: 501 ALTLLNLSQNAKLTDKTLELISGLTALVSLNVSNSRVSNAGFRHLKALQNLRSLTLDSCR 560
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
VT N++K+L++ LPNL+S RPE
Sbjct: 561 VTVNEMKKLRATALPNLISVRPE 583
>gi|242076388|ref|XP_002448130.1| hypothetical protein SORBIDRAFT_06g021780 [Sorghum bicolor]
gi|241939313|gb|EES12458.1| hypothetical protein SORBIDRAFT_06g021780 [Sorghum bicolor]
Length = 581
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 325/503 (64%), Positives = 388/503 (77%), Gaps = 31/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
+LPRD+SQQIFNELV CLTE SL AFRDCALQD+CLG YPGV D WM+V+ASQG SLL
Sbjct: 79 LLPRDLSQQIFNELVECGCLTEASLGAFRDCALQDVCLGDYPGVTDAWMEVVASQGQSLL 138
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVDLS SDVTDSG LKDCS++QSL ++C +IS+ GL+ L G SNLTSLS ++ A+T
Sbjct: 139 SVDLSCSDVTDSGFNLLKDCSSMQSLACDYCDKISEHGLKTLSGFSNLTSLSIKKCAAVT 198
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
A+G KAFA L+NLV LDLERC +IHGGL++LKGL KLE LN+++CNCITDSDMK LS LT
Sbjct: 199 AEGAKAFANLVNLVNLDLERCPKIHGGLIHLKGLKKLEKLNMRYCNCITDSDMKYLSDLT 258
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NL+ LQ+S K++D G++YL+GL KL LNLEGC VTAACL+ +S L SL LNL+RC +
Sbjct: 259 NLRELQLSSCKISDFGVSYLRGLHKLGHLNLEGCSVTAACLEVISELASLVLLNLSRCGI 318
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D+GCE + LK LNLGFN IT CL+HLK L +LE LNLDSC IGDEGL +L GL
Sbjct: 319 CDEGCENLEGLTKLKALNLGFNHITGACLIHLKDLISLECLNLDSCKIGDEGLFHLKGLI 378
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
LK LELSDT+VGS+GLRHLSGL NL+SINLSFT ++D L+K++GLSSLKSLNLD RQI
Sbjct: 379 QLKSLELSDTEVGSNGLRHLSGLRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNRQI 438
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------- 411
TDTGLA+LT+LTGLTHLDLFGARITDSG R FKNL+SLE+CGG +TDA
Sbjct: 439 TDTGLASLTNLTGLTHLDLFGARITDSGMNCFRFFKNLQSLEVCGGLITDAGVKNIKDLK 498
Query: 412 ----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
GLT LVSLNVSNSR++++GL HLKPL NLRSL+LESC+
Sbjct: 499 ALTLLNLSQNGNLTDKTLELISGLTALVSLNVSNSRVSNSGLHHLKPLLNLRSLSLESCR 558
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
VTA++I +L+ LPNL+S RPE
Sbjct: 559 VTASEIDKLRLVALPNLISVRPE 581
>gi|226501144|ref|NP_001141453.1| uncharacterized protein LOC100273563 [Zea mays]
gi|194704638|gb|ACF86403.1| unknown [Zea mays]
gi|414586493|tpg|DAA37064.1| TPA: regulatory subunit [Zea mays]
Length = 581
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 320/503 (63%), Positives = 387/503 (76%), Gaps = 31/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
+LPRD+SQQIFNELV CLTE SL AFRDC LQD+CLG YPGV D WM+V+ASQG SLL
Sbjct: 79 LLPRDLSQQIFNELVECGCLTEASLGAFRDCDLQDICLGDYPGVTDAWMEVVASQGQSLL 138
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVDLS SDVTDSG LKDCS++QSL ++C QIS+ GL+ L G SNLTSLS ++ A+T
Sbjct: 139 SVDLSCSDVTDSGFNLLKDCSSMQSLACDYCDQISEHGLKTLSGFSNLTSLSIKKCAAVT 198
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
A+G KAFA L+NLV LDLERC +I+GGL++LKGL KLE LN+++CN ITDSDMK LS LT
Sbjct: 199 AEGAKAFANLVNLVNLDLERCPKINGGLIHLKGLKKLEKLNLRYCNGITDSDMKYLSDLT 258
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NL+ LQ+S K++ G++YL+GL KL LNLEGC VTA CL+ +S L SL LNL+RC +
Sbjct: 259 NLRELQLSSCKISAFGVSYLRGLHKLGHLNLEGCAVTAVCLEVISELASLVLLNLSRCGI 318
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D+GCE + LK L+LGFN+ITD CL+HLK L NLE LNLDSC IGDEGL +L GL
Sbjct: 319 CDEGCENLKGLTKLKALSLGFNQITDACLIHLKDLVNLECLNLDSCKIGDEGLFHLKGLI 378
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
LK LELSDT+VGS+GLRHLSGL NL+SINLSFT ++D L+K++GLSSLKSLNLD RQI
Sbjct: 379 QLKNLELSDTEVGSNGLRHLSGLRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNRQI 438
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------- 411
TDTGLA+LT LTGLTHLDLFGARITDSG + R FKN++SLE+CGG +TDA
Sbjct: 439 TDTGLASLTGLTGLTHLDLFGARITDSGMSCFRFFKNIQSLEVCGGLITDAGVKNIKDLK 498
Query: 412 ----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
GLT LVSLNVSNSR++++GL HLKPL+NLRSL+LESC+
Sbjct: 499 ALTLLNLSQNGKLTDKTLELISGLTALVSLNVSNSRVSNSGLHHLKPLQNLRSLSLESCR 558
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
VTA+++ +L+ LPNL+S RPE
Sbjct: 559 VTASEMDKLRLVALPNLISVRPE 581
>gi|356519278|ref|XP_003528300.1| PREDICTED: F-box/LRR-repeat protein 14-like isoform 2 [Glycine max]
Length = 529
Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust.
Identities = 323/472 (68%), Positives = 371/472 (78%), Gaps = 19/472 (4%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
MLPRDISQ IFN LVYSR LT SLEAFRDCALQDL LG+Y GVND WM VI+SQGSSLL
Sbjct: 75 MLPRDISQLIFNNLVYSRRLTSASLEAFRDCALQDLYLGEYDGVNDNWMGVISSQGSSLL 134
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVDLSGSDVTD GL +LKDC +L SL+ N+C QISD GLE + GLSNLTSLSFRRN++I+
Sbjct: 135 SVDLSGSDVTDFGLTYLKDCESLISLNLNYCDQISDRGLECISGLSNLTSLSFRRNDSIS 194
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
AQGM AF+GL+NLVKLDLERC IHGGLV+L+GL KLESLN+KWCNCITD DMKPLS L
Sbjct: 195 AQGMSAFSGLVNLVKLDLERCPGIHGGLVHLRGLTKLESLNLKWCNCITDYDMKPLSELA 254
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
+LKSL+IS SKVTD GI++LKGLQKL LLNLEGC VTAACLDSL+ L +L LNLNRC L
Sbjct: 255 SLKSLEISSSKVTDFGISFLKGLQKLALLNLEGCLVTAACLDSLAELPALSNLNLNRCNL 314
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
SD+GC+K S++ +LKVLNLGFN ITD CLVHLKGLT LESLNLDSC IGDEGLVNL GL
Sbjct: 315 SDNGCKKISRLENLKVLNLGFNVITDACLVHLKGLTKLESLNLDSCKIGDEGLVNLAGLE 374
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
L CLELSDT+VGS+GL HLSGLT L ++L I+D L +L+SL + +
Sbjct: 375 QLNCLELSDTEVGSNGLHHLSGLTGLTDLDLFGARITDFGTNYLKKFKNLRSLEICGGVL 434
Query: 361 TDTGLAALTSLTGLTHLDLF-GARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSL 419
TD G+ + L+ L L+L + +TD ++LE+ G LTGLVSL
Sbjct: 435 TDAGVKNIKELSSLVCLNLSQNSNLTD------------KTLELISG------LTGLVSL 476
Query: 420 NVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFRP 471
NVSNSRIT+AGL+HLK LKNLRSLTLESCKVTANDIK+L+S LPNLVSFRP
Sbjct: 477 NVSNSRITNAGLQHLKTLKNLRSLTLESCKVTANDIKKLKSIYLPNLVSFRP 528
>gi|195647464|gb|ACG43200.1| regulatory subunit [Zea mays]
Length = 581
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 318/503 (63%), Positives = 385/503 (76%), Gaps = 31/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
+LPRD+SQQIFNELV CLTE SL AFRDC LQD+CLG YPGV D WM+V+ASQG SLL
Sbjct: 79 LLPRDLSQQIFNELVECGCLTEASLGAFRDCDLQDICLGDYPGVTDAWMEVVASQGQSLL 138
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVDLS SDV DSG LKDCS++Q+L ++C QIS+ GL+ L G SNLTSLS ++ A+T
Sbjct: 139 SVDLSCSDVIDSGFNLLKDCSSMQNLACDYCDQISEHGLKTLSGFSNLTSLSIKKCAAVT 198
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
A+G KAFA L+NLV LDLERC +I+GGL++LKGL KLE LN+++CN ITDSDMK LS LT
Sbjct: 199 AEGAKAFANLVNLVNLDLERCPKINGGLIHLKGLKKLEKLNLRYCNGITDSDMKYLSDLT 258
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NL+ LQ+S K++ G++YL+GL KL LNLEGC VTA CL+ +S L SL LNL+RC +
Sbjct: 259 NLRELQLSSCKISAFGVSYLRGLHKLGHLNLEGCAVTAVCLEVISELASLVLLNLSRCGI 318
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D+GCE + LK L+LGFN+ITD CL+HLK L NLE LNLDSC IGDEGL +L GL
Sbjct: 319 CDEGCENLKGLTKLKALSLGFNQITDACLIHLKDLVNLECLNLDSCKIGDEGLFHLKGLI 378
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
LK LELSDT+VGS+GLRHLSGL NL+SINLSFT ++D L+K++GLSSLKSLNLD RQI
Sbjct: 379 QLKNLELSDTEVGSNGLRHLSGLRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNRQI 438
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------- 411
TDTGLA+LT LTGLTHLDLFGARITDSG + R FKN++SLE+CGG +TDA
Sbjct: 439 TDTGLASLTGLTGLTHLDLFGARITDSGMSCFRFFKNIQSLEVCGGLITDAGVKNIKDLK 498
Query: 412 ----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
GLT LVSLNVSNSR+++ GL HLKPL+NLRSL+LESC+
Sbjct: 499 ALTLLNLSQNGKLTDKTLELISGLTALVSLNVSNSRVSNLGLHHLKPLQNLRSLSLESCR 558
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
VTA+++ +L+ LPNL+S RPE
Sbjct: 559 VTASEMDKLRLVALPNLISVRPE 581
>gi|255553315|ref|XP_002517700.1| F-box/LRR-repeat protein, putative [Ricinus communis]
gi|223543332|gb|EEF44864.1| F-box/LRR-repeat protein, putative [Ricinus communis]
Length = 529
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 345/503 (68%), Positives = 377/503 (74%), Gaps = 80/503 (15%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
MLPRDISQQIFNELVYS+ L + ++EAFRDCALQDL LG+ PGVND WMDVI+SQG SLL
Sbjct: 76 MLPRDISQQIFNELVYSQRLNDATIEAFRDCALQDLHLGECPGVNDSWMDVISSQGISLL 135
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVDLSGSDVTDS GL +L+ +NL +L+F + I+
Sbjct: 136 SVDLSGSDVTDS-------------------------GLAYLKDCTNLQALNFNYCDQIS 170
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
G L N+ L+KLESLNIKWCNCITD+DMK LSGL
Sbjct: 171 DPG------------------------LSNISDLLKLESLNIKWCNCITDADMKYLSGLV 206
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
LK LQISCSKVTD GI+YLKGL KL LLNLEGCPVT ACLDSLSAL +L YLNLNRC L
Sbjct: 207 KLKGLQISCSKVTDVGISYLKGLHKLNLLNLEGCPVTVACLDSLSALAALLYLNLNRCHL 266
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
SDDGCE FSK+G LKVLNLGFN+I+D CLVHLKGLTNLESLNLDSC I DEGL NLTGL
Sbjct: 267 SDDGCEAFSKLGRLKVLNLGFNDISDACLVHLKGLTNLESLNLDSCRIDDEGLANLTGLR 326
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
+LKCL LSDT+VGSSGLRHLSGLTNLESINLSFT I+DG +RKL+GLSSLKSLNLDARQI
Sbjct: 327 HLKCLVLSDTEVGSSGLRHLSGLTNLESINLSFTMITDGGIRKLSGLSSLKSLNLDARQI 386
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------- 411
TD+GLAALT+LTGLTHLDLFGARITDSG YLRNFKNL+SLEICGGGLTDA
Sbjct: 387 TDSGLAALTNLTGLTHLDLFGARITDSGTHYLRNFKNLQSLEICGGGLTDAGIRNIKDLS 446
Query: 412 ----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
GLTGLVSLNVSNSRITSAGL+HLKPLKNL+SLTLESCK
Sbjct: 447 SLSLLNLSQNCNLTDKSLELISGLTGLVSLNVSNSRITSAGLQHLKPLKNLKSLTLESCK 506
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
VTA DIK+LQS DLP LVSFRPE
Sbjct: 507 VTATDIKKLQSTDLPQLVSFRPE 529
>gi|226505324|ref|NP_001147302.1| regulatory subunit [Zea mays]
gi|195609698|gb|ACG26679.1| regulatory subunit [Zea mays]
gi|413937767|gb|AFW72318.1| regulatory subunit isoform 1 [Zea mays]
gi|413937768|gb|AFW72319.1| regulatory subunit isoform 2 [Zea mays]
Length = 582
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 313/503 (62%), Positives = 390/503 (77%), Gaps = 31/503 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
MLPRD+SQQIFNELV S LTE SL+ FRDCALQD+ LG+YPGV D WM+V+ASQ SLL
Sbjct: 80 MLPRDLSQQIFNELVNSNRLTEASLQVFRDCALQDIGLGEYPGVKDAWMEVVASQKQSLL 139
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVD+S S+V DSG+ L+DCS++QSL N+C QIS+ GL L GLSNL+SLSF+R+NA+T
Sbjct: 140 SVDISCSEVADSGIDLLRDCSSMQSLACNYCDQISESGLGVLSGLSNLSSLSFKRSNAVT 199
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
A+GM+AFA L+NL+ LDLE C +IHGGL++LK L KLESLN+++CN I DSD+K L+ LT
Sbjct: 200 AEGMRAFANLVNLLNLDLEGCLKIHGGLIHLKDLTKLESLNMRYCNYIADSDIKYLTDLT 259
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NLK LQ+SC K+TD G++Y++GLQKLT LNLEGCPVTAACL+++S L SL LNLNRC +
Sbjct: 260 NLKDLQLSCCKITDLGVSYIRGLQKLTHLNLEGCPVTAACLEAISGLSSLVLLNLNRCGI 319
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
DDGCE F + LKVLNLGFN ITD CLVHLK L +LESLNLDSC IGD+GL +L GL
Sbjct: 320 YDDGCENFEGLKRLKVLNLGFNYITDACLVHLKELISLESLNLDSCKIGDDGLSHLKGLV 379
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
L+ LELSDT+VG++GL+HLSGL NL+SINLSFT ++D ++K++ L+SLKS+NLD RQI
Sbjct: 380 LLQSLELSDTEVGNNGLQHLSGLRNLQSINLSFTLVTDIGVKKISVLNSLKSVNLDNRQI 439
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------- 411
TD GLAAL SLT LTHLDLFGA ITD+G R FKNL SLE+CGG +TDA
Sbjct: 440 TDVGLAALISLTRLTHLDLFGACITDNGTNCFRYFKNLVSLEVCGGFVTDAGVKNIKDLK 499
Query: 412 ----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
GLT L++LNVSNSR+++AGL+HL L NLRSL+L+S +
Sbjct: 500 ALTLLNLSQNANLTDKTLELISGLTALINLNVSNSRVSNAGLKHLNDLHNLRSLSLDSTR 559
Query: 450 VTANDIKRLQSRDLPNLVSFRPE 472
VTAN++++L++ L NL+S RPE
Sbjct: 560 VTANEMRKLRATVLHNLISMRPE 582
>gi|302796665|ref|XP_002980094.1| hypothetical protein SELMODRAFT_419616 [Selaginella moellendorffii]
gi|302822036|ref|XP_002992678.1| hypothetical protein SELMODRAFT_162512 [Selaginella moellendorffii]
gi|300139524|gb|EFJ06263.1| hypothetical protein SELMODRAFT_162512 [Selaginella moellendorffii]
gi|300152321|gb|EFJ18964.1| hypothetical protein SELMODRAFT_419616 [Selaginella moellendorffii]
Length = 578
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 276/500 (55%), Positives = 348/500 (69%), Gaps = 31/500 (6%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLS 61
LPRD++Q+I NELV ++ L+ +AF DCA+QD+ LG YPGV+D WM+VI SQ LL+
Sbjct: 77 LPRDLTQKILNELVQTQALSRELFQAFEDCAIQDIYLGYYPGVDDSWMEVIGSQKFCLLA 136
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
VD SGS VTD G+ L+ C N++ + N C ISD L + G +NLTSLSF++N IT
Sbjct: 137 VDFSGSMVTDEGVQCLQICENVEIICMNECKYISDISLSYFTGFTNLTSLSFQKNKLITP 196
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
GM+ AGL NL LDLERC +IH GLV +KGL KLE LN+ WCNCI SDMK LSGLTN
Sbjct: 197 AGMRHLAGLPNLKHLDLERCPKIHDGLVYIKGLTKLEKLNLGWCNCIRSSDMKQLSGLTN 256
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
L LQIS SKV D GI +LK L+KL +LN+EGCPVT AC+D+++ L SL LNL C +S
Sbjct: 257 LLELQISRSKVKDFGITFLKDLKKLEVLNMEGCPVTFACMDTIAGLTSLTTLNLKSCYIS 316
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
D GC K +G+LK LNL + ++D +V+LK L +L+ LNLDSC IGD+G+ N L N
Sbjct: 317 DFGCRKLEGLGNLKNLNLSYTNVSDAGMVYLKNLKSLQFLNLDSCKIGDQGVQNFKNLVN 376
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
LK L+LSD+ +G+ L L+GL+ LES+N+S T ++D L K++GL+SLKSLN+D+RQIT
Sbjct: 377 LKSLDLSDSLIGNHALNFLTGLSKLESLNISSTMVTDMGLHKISGLTSLKSLNIDSRQIT 436
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----------- 410
DTGL ALTSLT LTHLDLF ARITD G LR+FK L+SLE+CGGG+TD
Sbjct: 437 DTGLMALTSLTNLTHLDLFSARITDYGIGSLRHFKKLQSLEVCGGGITDVGVKSLKDLTD 496
Query: 411 --------------------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
+GLT LVSLNV NS +T+AGL+HL PLKNL SL L+SCKV
Sbjct: 497 LTYLNLSQNGQLTDQALEALSGLTKLVSLNVGNSSVTNAGLQHLLPLKNLTSLALQSCKV 556
Query: 451 TANDIKRLQSRDLPNLVSFR 470
T I++LQ+ LPNLV R
Sbjct: 557 TLWAIQKLQASSLPNLVIVR 576
>gi|168057635|ref|XP_001780819.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667754|gb|EDQ54376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 564
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 268/497 (53%), Positives = 351/497 (70%), Gaps = 32/497 (6%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLS 61
+PRD+ QQ+ N+LV + L+ V+LE F DCALQD+ L YPGV D W+D+I SQG SLL+
Sbjct: 62 VPRDLIQQVLNDLVRKQLLSPVTLELFSDCALQDVLLADYPGVEDFWLDIIGSQGESLLA 121
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
+D+SGS VTD GL L+ C+NLQ+L N C ISD GL L GLSNLT+LS R +N ITA
Sbjct: 122 LDISGSPVTDDGLACLQSCTNLQTLSLNSCDHISDEGLSVLSGLSNLTTLSLRSSNLITA 181
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
GM+ F L++L LDLERC IHGG V L+GL LE LN+ WC + ++D+ L+G+ N
Sbjct: 182 AGMRNFTNLVSLKNLDLERCPLIHGGFVYLRGLTTLEKLNVGWCIGVRNADITHLAGIVN 241
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
LK LQIS SKV DSG+A LKG+ L L++EGCP+TA + +++ L +L +LN+N C L
Sbjct: 242 LKELQISRSKVNDSGVASLKGMTNLRSLSMEGCPITAQSMKTIAGLTTLCHLNINSCYLP 301
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
D GC+K + +L+ LNLG+NE+TD +V LKGLTNLE LNLDSC +GDEG+ ++ GL N
Sbjct: 302 DSGCQKLEGLINLRTLNLGYNELTDSGMVFLKGLTNLERLNLDSCKVGDEGIKHVKGLLN 361
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFT-GISDGSLRKLAGLSSLKSLNLDARQI 360
L+ L+LSD++VG+ GLR LSGL LE +NLSFT G++D L +A ++SL SLNLD++QI
Sbjct: 362 LRMLDLSDSEVGNVGLRFLSGLKKLEILNLSFTGGVTDIGLSTIATITSLTSLNLDSKQI 421
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG----- 415
TDTGLAALT LTGL +LDLFGA+ITD G A LR+FKNL+SLE+CGGG+TD G++
Sbjct: 422 TDTGLAALTGLTGLKNLDLFGAKITDYGMARLRHFKNLQSLELCGGGITDVGVSSIKDLT 481
Query: 416 --------------------------LVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
LVSLNV+NS++T+AGL+HL+PL L SL L+ CK
Sbjct: 482 LLTSLNLSHNLRLTDRSLQYLSGMENLVSLNVANSKVTNAGLQHLRPLTKLTSLALQGCK 541
Query: 450 VTANDIKRLQSRDLPNL 466
VT + L++ LPNL
Sbjct: 542 VTRTAVDHLKATSLPNL 558
>gi|70663921|emb|CAE02935.3| OSJNBa0014K14.7 [Oryza sativa Japonica Group]
Length = 557
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 282/505 (55%), Positives = 345/505 (68%), Gaps = 59/505 (11%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
+LPRD+SQQ+FNELV LTE L AFRDCALQD+CL YPGV D WM+V ASQG SLL
Sbjct: 79 LLPRDLSQQVFNELVEWNILTEELLGAFRDCALQDICLADYPGVRDAWMEVAASQGQSLL 138
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVD+S SDVTD GL LKDC NLQSL N+C QIS+ GL+ L GLSN+TSLSF++ +A+T
Sbjct: 139 SVDISCSDVTDGGLNQLKDCINLQSLSCNYCDQISEHGLKTLSGLSNVTSLSFKKCSAVT 198
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
A+G KAFA ++NL LDLERC +IHGGLV+LKGL KLE LN+++CN ITDSDMK LS LT
Sbjct: 199 AEGAKAFANMVNLGSLDLERCPKIHGGLVHLKGLRKLEKLNLRYCNGITDSDMKHLSDLT 258
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NL+ LQ+SC K++D G++YL+GL KL LNLEGC VTAACL+ +S L SL LNL+RC +
Sbjct: 259 NLRELQLSCCKISDLGVSYLRGLSKLAHLNLEGCAVTAACLEVISGLASLVLLNLSRCGV 318
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D+GCE + LKVLNLGFN ITD CLVHLK L NLE LNLDSC IGDEGL +L
Sbjct: 319 YDEGCEHLEGLVKLKVLNLGFNYITDACLVHLKELINLECLNLDSCKIGDEGLAHLK--- 375
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
+ H L++ N + + + +KL + + + +
Sbjct: 376 ----------------VFH----KTLKAENHTISLMQTSETKKLG---TFRHRSWEQWTS 412
Query: 361 TDTGLAALTS--LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------ 412
+ + L+S LTGLTHLDLFGARITD+G L+ FKNL+SLE+CGG +TDAG
Sbjct: 413 SSLWMVFLSSQGLTGLTHLDLFGARITDAGTNCLKYFKNLQSLEVCGGLITDAGVKNIKD 472
Query: 413 -------------------------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 447
LT LVSLNVSNSR++++GL HLKPL+NLRSL+LES
Sbjct: 473 LKALTLLNLSQNGNLTDKSLELISRLTALVSLNVSNSRVSNSGLHHLKPLQNLRSLSLES 532
Query: 448 CKVTANDIKRLQSRDLPNLVSFRPE 472
CKVTA +IK+LQ LPNLVS RPE
Sbjct: 533 CKVTAIEIKKLQLAALPNLVSVRPE 557
>gi|168012567|ref|XP_001758973.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689672|gb|EDQ76042.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 584
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 270/502 (53%), Positives = 348/502 (69%), Gaps = 33/502 (6%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLS 61
+PRD+ Q + +ELV + L+ +LE F DC+LQD+ L YPGV D W+ VI SQG SLL+
Sbjct: 81 VPRDLIQLVLDELVRRQLLSPTTLELFSDCSLQDVLLPDYPGVEDSWLQVIGSQGESLLA 140
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
+D+S S VTD GL L+ C+NLQSL N C I+D GL L GLSNLT+LS R NN ITA
Sbjct: 141 LDISSSTVTDEGLSFLESCTNLQSLILNACESIADEGLTSLSGLSNLTTLSLRSNNMITA 200
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
GM+ F L++L LDL+RC I GG V LKGL LE LN+ WC + +SD+K LSGL N
Sbjct: 201 AGMQNFTHLVSLKNLDLQRCPSIQGGFVYLKGLTTLEKLNVGWCIGVRNSDIKHLSGLVN 260
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQL 240
LK LQIS SKV+DSG+A L GL KL L++EGC VT+ ++S+ L +++LN+N C L
Sbjct: 261 LKELQISRSKVSDSGLASLTGLTKLRSLSMEGCQAVTSKGMESIGGLTGVWHLNVNSCFL 320
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D G +K + +L+ LN+G+N +++ + LKGLTNLE LNLDSC IGD G+ N+ GL
Sbjct: 321 HDSGFQKLEGLINLRTLNMGYNNVSNSGMGFLKGLTNLERLNLDSCKIGDHGIENVKGLV 380
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT-GISDGSLRKLAGLSSLKSLNLDARQ 359
NLK L+LSDT++ S+GLR L+GL NLES+NLSFT GI+D LR +A ++SL SLNLD++Q
Sbjct: 381 NLKMLDLSDTEIESAGLRFLTGLKNLESLNLSFTGGIADSGLRTIATITSLTSLNLDSKQ 440
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA-------- 411
ITDTGLAALT LTGL LDLFGARITD G A LR+FK L++LE+CGGG+TDA
Sbjct: 441 ITDTGLAALTGLTGLKTLDLFGARITDYGMACLRHFKKLQTLELCGGGITDAGVRSIKDL 500
Query: 412 -----------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
G+ LVSLN++NSR+T+AGL+HL+PL NL SL L+ C
Sbjct: 501 TSLTSLNLSQNMRLTDNSLQYLSGMKNLVSLNLANSRVTNAGLQHLRPLTNLTSLALQDC 560
Query: 449 KVTANDIKRLQSRDLPNLVSFR 470
KVT ++RLQ+ LP+L R
Sbjct: 561 KVTLPAVERLQATYLPSLTVIR 582
>gi|14423508|gb|AAK62436.1|AF386991_1 Unknown protein [Arabidopsis thaliana]
gi|20148357|gb|AAM10069.1| unknown protein [Arabidopsis thaliana]
Length = 332
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/332 (69%), Positives = 268/332 (80%), Gaps = 32/332 (9%)
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLF 231
M+PLS LTNL+SLQI CSK+TD GI+YLKGL KL LLNLEGC VTAACLD+L+AL L
Sbjct: 1 MEPLSVLTNLRSLQICCSKITDIGISYLKGLNKLNLLNLEGCRHVTAACLDTLTALAGLM 60
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
YLNLNRC SD GCEKFS + +LK+LNLG N IT+ CLVHLKGLT LESLNLDSC IGDE
Sbjct: 61 YLNLNRCNFSDSGCEKFSDLINLKILNLGMNNITNSCLVHLKGLTKLESLNLDSCRIGDE 120
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
GLV+L+G+ LK LELSDT+VGS+GLRHLSGL+NLESINLSFT ++D LRKL+GL+SL+
Sbjct: 121 GLVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTVVTDSGLRKLSGLTSLR 180
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD- 410
+LNLDAR +TD GL+ALTSLTGLTHLDLFGARITDSG +LRN K L+SLEICGGGLTD
Sbjct: 181 TLNLDARHVTDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSLEICGGGLTDT 240
Query: 411 ------------------------------AGLTGLVSLNVSNSRITSAGLRHLKPLKNL 440
+GLTGLVSLNVSNSR++S+GLRHLKPLKNL
Sbjct: 241 GVKNIKDLSSLTLLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNL 300
Query: 441 RSLTLESCKVTANDIKRLQSRDLPNLVSFRPE 472
RSLTLESCK++ANDI++LQ+ DLPNLV+FRPE
Sbjct: 301 RSLTLESCKLSANDIRKLQATDLPNLVNFRPE 332
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 160/313 (51%), Gaps = 27/313 (8%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L S+ + S +TD G+ +LK + L L+ C ++ L+ L L+ L L+ R
Sbjct: 8 TNLRSLQICCSKITDIGISYLKGLNKLNLLNLEGCRHVTAACLDTLTALAGLMYLNLNRC 67
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N + G + F+ LINL L+L + LV+LKGL KLESLN+ C I D + L
Sbjct: 68 N-FSDSGCEKFSDLINLKILNLGMNNITNSCLVHLKGLTKLESLNLDSCR-IGDEGLVHL 125
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
SG+ LKSL++S ++V +G+ +L GL L +NL VT + L LS L SL LNL+
Sbjct: 126 SGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLD 185
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN- 295
++D G + + L L+L ITD HL+ L L+SL + G+ D G+ N
Sbjct: 186 ARHVTDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNI 245
Query: 296 ------------------------LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
++GL L L +S+++V SSGLRHL L NL S+ L
Sbjct: 246 KDLSSLTLLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNLRSLTL 305
Query: 332 SFTGISDGSLRKL 344
+S +RKL
Sbjct: 306 ESCKLSANDIRKL 318
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 101/192 (52%), Gaps = 26/192 (13%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L S++LS ++V +GL HL SNL+S++ +F + ++D GL L GL++L +L+ +
Sbjct: 131 LKSLELSDTEVGSNGLRHLSGLSNLESINLSFTV-VTDSGLRKLSGLTSLRTLNLDARH- 188
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL-------------NIK-- 163
+T G+ A L L LDL G +L+ L KL+SL NIK
Sbjct: 189 VTDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIKDL 248
Query: 164 ---------WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC 214
+ +TD ++ +SGLT L SL +S S+V+ SG+ +LK L+ L L LE C
Sbjct: 249 SSLTLLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNLRSLTLESC 308
Query: 215 PVTAACLDSLSA 226
++A + L A
Sbjct: 309 KLSANDIRKLQA 320
>gi|414586494|tpg|DAA37065.1| TPA: hypothetical protein ZEAMMB73_067914 [Zea mays]
Length = 400
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/322 (66%), Positives = 255/322 (79%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
+LPRD+SQQIFNELV CLTE SL AFRDC LQD+CLG YPGV D WM+V+ASQG SLL
Sbjct: 79 LLPRDLSQQIFNELVECGCLTEASLGAFRDCDLQDICLGDYPGVTDAWMEVVASQGQSLL 138
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVDLS SDVTDSG LKDCS++QSL ++C QIS+ GL+ L G SNLTSLS ++ A+T
Sbjct: 139 SVDLSCSDVTDSGFNLLKDCSSMQSLACDYCDQISEHGLKTLSGFSNLTSLSIKKCAAVT 198
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
A+G KAFA L+NLV LDLERC +I+GGL++LKGL KLE LN+++CN ITDSDMK LS LT
Sbjct: 199 AEGAKAFANLVNLVNLDLERCPKINGGLIHLKGLKKLEKLNLRYCNGITDSDMKYLSDLT 258
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NL+ LQ+S K++ G++YL+GL KL LNLEGC VTA CL+ +S L SL LNL+RC +
Sbjct: 259 NLRELQLSSCKISAFGVSYLRGLHKLGHLNLEGCAVTAVCLEVISELASLVLLNLSRCGI 318
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D+GCE + LK L+LGFN+ITD CL+HLK L NLE LNLDSC IGDEGL +L GL
Sbjct: 319 CDEGCENLKGLTKLKALSLGFNQITDACLIHLKDLVNLECLNLDSCKIGDEGLFHLKGLI 378
Query: 301 NLKCLELSDTQVGSSGLRHLSG 322
LK LELSDT+VGS+GLRHLSG
Sbjct: 379 QLKNLELSDTEVGSNGLRHLSG 400
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 134/304 (44%), Gaps = 42/304 (13%)
Query: 132 NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CS 190
+L+ +DL G LK ++SL +C+ I++ +K LSG +NL SL I C+
Sbjct: 136 SLLSVDLSCSDVTDSGFNLLKDCSSMQSLACDYCDQISEHGLKTLSGFSNLTSLSIKKCA 195
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
VT G L L L+LE CP L L L L LNL C
Sbjct: 196 AVTAEGAKAFANLVNLVNLDLERCPKINGGLIHLKGLKKLEKLNLRYC------------ 243
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
N ITD + +L LTNL L L SC I G+ L GL L L L
Sbjct: 244 -----------NGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRGLHKLGHLNLEGC 292
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
V + L +S L +L +NLS GI D L GL+ LK+L+L QITD L L
Sbjct: 293 AVTAVCLEVISELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQITDACLIHLKD 352
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAG 430
L L L+L +I D G +L+ L++LE+ S++ + S G
Sbjct: 353 LVNLECLNLDSCKIGDEGLFHLKGLIQLKNLEL------------------SDTEVGSNG 394
Query: 431 LRHL 434
LRHL
Sbjct: 395 LRHL 398
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 143/276 (51%), Gaps = 14/276 (5%)
Query: 187 ISCSKVTDSGIAYLKG--LQKLTLLNLEGCPVTAACLDSLSALG-SLFYLNLNRCQLSDD 243
+ C +T++ + + LQ + L + G VT A ++ +++ G SL ++L+ ++D
Sbjct: 93 VECGCLTEASLGAFRDCDLQDICLGDYPG--VTDAWMEVVASQGQSLLSVDLSCSDVTDS 150
Query: 244 GCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCN 301
G S++ L + ++I++ L L G +NL SL++ C + EG L N
Sbjct: 151 GFNLLKDCSSMQSLACDYCDQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVN 210
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDARQI 360
L L+L + GL HL GL LE +NL + GI+D ++ L+ L++L+ L L + +I
Sbjct: 211 LVNLDLERCPKINGGLIHLKGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKI 270
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LT 414
+ G++ L L L HL+L G +T + +L L + G+ D G LT
Sbjct: 271 SAFGVSYLRGLHKLGHLNLEGCAVTAVCLEVISELASLVLLNLSRCGICDEGCENLKGLT 330
Query: 415 GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
L +L++ ++IT A L HLK L NL L L+SCK+
Sbjct: 331 KLKALSLGFNQITDACLIHLKDLVNLECLNLDSCKI 366
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 33/161 (20%)
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLTGLTHLDLFG-A 382
+L S++LS + ++D L SS++SL D QI++ GL L+ + LT L + A
Sbjct: 136 SLLSVDLSCSDVTDSGFNLLKDCSSMQSLACDYCDQISEHGLKTLSGFSNLTSLSIKKCA 195
Query: 383 RITDSGAAYLRNFKNL------RSLEICGG-------------------GLTDAG----- 412
+T GA N NL R +I GG G+TD+
Sbjct: 196 AVTAEGAKAFANLVNLVNLDLERCPKINGGLIHLKGLKKLEKLNLRYCNGITDSDMKYLS 255
Query: 413 -LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
LT L L +S+ +I++ G+ +L+ L L L LE C VTA
Sbjct: 256 DLTNLRELQLSSCKISAFGVSYLRGLHKLGHLNLEGCAVTA 296
>gi|413937766|gb|AFW72317.1| hypothetical protein ZEAMMB73_434085 [Zea mays]
Length = 403
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/324 (67%), Positives = 268/324 (82%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
MLPRD+SQQIFNELV S LTE SL+ FRDCALQD+ LG+YPGV D WM+V+ASQ SLL
Sbjct: 80 MLPRDLSQQIFNELVNSNRLTEASLQVFRDCALQDIGLGEYPGVKDAWMEVVASQKQSLL 139
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVD+S S+V DSG+ L+DCS++QSL N+C QIS+ GL L GLSNL+SLSF+R+NA+T
Sbjct: 140 SVDISCSEVADSGIDLLRDCSSMQSLACNYCDQISESGLGVLSGLSNLSSLSFKRSNAVT 199
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
A+GM+AFA L+NL+ LDLE C +IHGGL++LK L KLESLN+++CN I DSD+K L+ LT
Sbjct: 200 AEGMRAFANLVNLLNLDLEGCLKIHGGLIHLKDLTKLESLNMRYCNYIADSDIKYLTDLT 259
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NLK LQ+SC K+TD G++Y++GLQKLT LNLEGCPVTAACL+++S L SL LNLNRC +
Sbjct: 260 NLKDLQLSCCKITDLGVSYIRGLQKLTHLNLEGCPVTAACLEAISGLSSLVLLNLNRCGI 319
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
DDGCE F + LKVLNLGFN ITD CLVHLK L +LESLNLDSC IGD+GL +L GL
Sbjct: 320 YDDGCENFEGLKRLKVLNLGFNYITDACLVHLKELISLESLNLDSCKIGDDGLSHLKGLV 379
Query: 301 NLKCLELSDTQVGSSGLRHLSGLT 324
L+ LELSDT+VG++GL+HLSGL+
Sbjct: 380 LLQSLELSDTEVGNNGLQHLSGLS 403
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 124/284 (43%), Gaps = 45/284 (15%)
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC-------------------------- 214
+L S+ ISCS+V DSGI L+ + L C
Sbjct: 137 SLLSVDISCSEVADSGIDLLRDCSSMQSLACNYCDQISESGLGVLSGLSNLSSLSFKRSN 196
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLK 273
VTA + + + L +L L+L C G + L+ LN+ + N I D + +L
Sbjct: 197 AVTAEGMRAFANLVNLLNLDLEGCLKIHGGLIHLKDLTKLESLNMRYCNYIADSDIKYLT 256
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
LTNL+ L L C I D G+ + GL L L L V ++ L +SGL++L +NL+
Sbjct: 257 DLTNLKDLQLSCCKITDLGVSYIRGLQKLTHLNLEGCPVTAACLEAISGLSSLVLLNLNR 316
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
GI D GL LK LNL ITD L L L L L+L +I D G ++L+
Sbjct: 317 CGIYDDGCENFEGLKRLKVLNLGFNYITDACLVHLKELISLESLNLDSCKIGDDGLSHLK 376
Query: 394 NFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPL 437
GL L SL +S++ + + GL+HL L
Sbjct: 377 ------------------GLVLLQSLELSDTEVGNNGLQHLSGL 402
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 82/151 (54%), Gaps = 7/151 (4%)
Query: 316 GLRHLSGLTNLESINLSFTG-ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 374
GL HL LT LES+N+ + I+D ++ L L++LK L L +ITD G++ + L L
Sbjct: 226 GLIHLKDLTKLESLNMRYCNYIADSDIKYLTDLTNLKDLQLSCCKITDLGVSYIRGLQKL 285
Query: 375 THLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITS 428
THL+L G +T + + +L L + G+ D GL L LN+ + IT
Sbjct: 286 THLNLEGCPVTAACLEAISGLSSLVLLNLNRCGIYDDGCENFEGLKRLKVLNLGFNYITD 345
Query: 429 AGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
A L HLK L +L SL L+SCK+ + + L+
Sbjct: 346 ACLVHLKELISLESLNLDSCKIGDDGLSHLK 376
>gi|217074604|gb|ACJ85662.1| unknown [Medicago truncatula]
Length = 331
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/331 (64%), Positives = 250/331 (75%), Gaps = 31/331 (9%)
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
MK +SG NLK LQIS S +TD GI+YL+GLQKL+ LN+EGC +TAAC + +SAL +L
Sbjct: 1 MKAISGFINLKELQISNSSITDLGISYLRGLQKLSTLNVEGCSITAACFEYISALAALAC 60
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
LNLNRC LSDDG EKFS + LK L+L FN+ITD CLVHLKGLT LE LNLDSC IGDEG
Sbjct: 61 LNLNRCGLSDDGFEKFSGLTGLKRLSLAFNKITDACLVHLKGLTKLEYLNLDSCQIGDEG 120
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
LVNLTGL LK L LSDT+VG+SG+R++SGL LE +NLSFT ++D L++L GL++LKS
Sbjct: 121 LVNLTGLTLLKSLVLSDTEVGNSGIRYISGLNKLEDLNLSFTSVTDNGLKRLLGLTNLKS 180
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA- 411
LNLDARQITD GLA LTSL+GL LDLFGARITDSG YLR+FKNL+SLEICGG LTDA
Sbjct: 181 LNLDARQITDAGLANLTSLSGLITLDLFGARITDSGTTYLRSFKNLQSLEICGGLLTDAG 240
Query: 412 ------------------------------GLTGLVSLNVSNSRITSAGLRHLKPLKNLR 441
G+T L SLNVSNSR+T+ GLR+LKPLKNLR
Sbjct: 241 VKNIREIVSLTQLNLSQNCKLTDKTLELISGMTALRSLNVSNSRVTNEGLRYLKPLKNLR 300
Query: 442 SLTLESCKVTANDIKRLQSRDLPNLVSFRPE 472
+L+LESCKV A DIK+L S DLPNL+SFRPE
Sbjct: 301 TLSLESCKVNAADIKKLHSTDLPNLISFRPE 331
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 165/326 (50%), Gaps = 38/326 (11%)
Query: 72 SGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA---------- 121
SG I+LK+ S I+D G+ +LRGL L++L+ +ITA
Sbjct: 5 SGFINLKELQISNS-------SITDLGISYLRGLQKLSTLNV-EGCSITAACFEYISALA 56
Query: 122 --------------QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNC 167
G + F+GL L +L L LV+LKGL KLE LN+ C
Sbjct: 57 ALACLNLNRCGLSDDGFEKFSGLTGLKRLSLAFNKITDACLVHLKGLTKLEYLNLDSCQ- 115
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
I D + L+GLT LKSL +S ++V +SGI Y+ GL KL LNL VT L L L
Sbjct: 116 IGDEGLVNLTGLTLLKSLVLSDTEVGNSGIRYISGLNKLEDLNLSFTSVTDNGLKRLLGL 175
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
+L LNL+ Q++D G + + L L+L ITD +L+ NL+SL + CG
Sbjct: 176 TNLKSLNLDARQITDAGLANLTSLSGLITLDLFGARITDSGTTYLRSFKNLQSLEI--CG 233
Query: 288 --IGDEGLVNLTGLCNLKCLELSDT-QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
+ D G+ N+ + +L L LS ++ L +SG+T L S+N+S + +++ LR L
Sbjct: 234 GLLTDAGVKNIREIVSLTQLNLSQNCKLTDKTLELISGMTALRSLNVSNSRVTNEGLRYL 293
Query: 345 AGLSSLKSLNLDARQITDTGLAALTS 370
L +L++L+L++ ++ + L S
Sbjct: 294 KPLKNLRTLSLESCKVNAADIKKLHS 319
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 133/228 (58%), Gaps = 4/228 (1%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
+ L+ + +TD+ L+HLK + L+ L+ + C QI D GL +L GL+ L SL + +
Sbjct: 85 LSLAFNKITDACLVHLKGLTKLEYLNLDSC-QIGDEGLVNLTGLTLLKSLVL-SDTEVGN 142
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
G++ +GL L L+L + GL L GL L+SLN+ ITD+ + L+ L+
Sbjct: 143 SGIRYISGLNKLEDLNLSFTSVTDNGLKRLLGLTNLKSLNLD-ARQITDAGLANLTSLSG 201
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR-CQL 240
L +L + +++TDSG YL+ + L L + G +T A + ++ + SL LNL++ C+L
Sbjct: 202 LITLDLFGARITDSGTTYLRSFKNLQSLEICGGLLTDAGVKNIREIVSLTQLNLSQNCKL 261
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
+D E S + +L+ LN+ + +T+E L +LK L NL +L+L+SC +
Sbjct: 262 TDKTLELISGMTALRSLNVSNSRVTNEGLRYLKPLKNLRTLSLESCKV 309
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 78/132 (59%), Gaps = 4/132 (3%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
S L+++DL G+ +TDSG +L+ NLQSL+ + ++D G++++R + +LT L+ +N
Sbjct: 200 SGLITLDLFGARITDSGTTYLRSFKNLQSLEICGGL-LTDAGVKNIREIVSLTQLNLSQN 258
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+T + ++ +G+ L L++ + GL LK L L +L+++ C + +D+K L
Sbjct: 259 CKLTDKTLELISGMTALRSLNVSNSRVTNEGLRYLKPLKNLRTLSLESCK-VNAADIKKL 317
Query: 177 --SGLTNLKSLQ 186
+ L NL S +
Sbjct: 318 HSTDLPNLISFR 329
>gi|414586492|tpg|DAA37063.1| TPA: hypothetical protein ZEAMMB73_067914 [Zea mays]
Length = 356
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/273 (64%), Positives = 215/273 (78%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
+LPRD+SQQIFNELV CLTE SL AFRDC LQD+CLG YPGV D WM+V+ASQG SLL
Sbjct: 79 LLPRDLSQQIFNELVECGCLTEASLGAFRDCDLQDICLGDYPGVTDAWMEVVASQGQSLL 138
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVDLS SDVTDSG LKDCS++QSL ++C QIS+ GL+ L G SNLTSLS ++ A+T
Sbjct: 139 SVDLSCSDVTDSGFNLLKDCSSMQSLACDYCDQISEHGLKTLSGFSNLTSLSIKKCAAVT 198
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
A+G KAFA L+NLV LDLERC +I+GGL++LKGL KLE LN+++CN ITDSDMK LS LT
Sbjct: 199 AEGAKAFANLVNLVNLDLERCPKINGGLIHLKGLKKLEKLNLRYCNGITDSDMKYLSDLT 258
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NL+ LQ+S K++ G++YL+GL KL LNLEGC VTA CL+ +S L SL LNL+RC +
Sbjct: 259 NLRELQLSSCKISAFGVSYLRGLHKLGHLNLEGCAVTAVCLEVISELASLVLLNLSRCGI 318
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
D+GCE + LK L+LGFN+ITD CL+HLK
Sbjct: 319 CDEGCENLKGLTKLKALSLGFNQITDACLIHLK 351
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 106/238 (44%), Gaps = 24/238 (10%)
Query: 132 NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CS 190
+L+ +DL G LK ++SL +C+ I++ +K LSG +NL SL I C+
Sbjct: 136 SLLSVDLSCSDVTDSGFNLLKDCSSMQSLACDYCDQISEHGLKTLSGFSNLTSLSIKKCA 195
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
VT G L L L+LE CP L L L L LNL C
Sbjct: 196 AVTAEGAKAFANLVNLVNLDLERCPKINGGLIHLKGLKKLEKLNLRYC------------ 243
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
N ITD + +L LTNL L L SC I G+ L GL L L L
Sbjct: 244 -----------NGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRGLHKLGHLNLEGC 292
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
V + L +S L +L +NLS GI D L GL+ LK+L+L QITD L L
Sbjct: 293 AVTAVCLEVISELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQITDACLIHL 350
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 123/230 (53%), Gaps = 4/230 (1%)
Query: 168 ITDSDMKPLSGL-TNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLS 225
+TD+ M+ ++ +L S+ +SCS VTDSG LK + L + C ++ L +LS
Sbjct: 122 VTDAWMEVVASQGQSLLSVDLSCSDVTDSGFNLLKDCSSMQSLACDYCDQISEHGLKTLS 181
Query: 226 ALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
+L L++ +C ++ +G + F+ + +L L+L + L+HLKGL LE LNL
Sbjct: 182 GFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCPKINGGLIHLKGLKKLEKLNLR 241
Query: 285 SC-GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
C GI D + L+ L NL+ L+LS ++ + G+ +L GL L +NL ++ L
Sbjct: 242 YCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRGLHKLGHLNLEGCAVTAVCLEV 301
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
++ L+SL LNL I D G L LT L L L +ITD+ +L+
Sbjct: 302 ISELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQITDACLIHLK 351
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 134/263 (50%), Gaps = 14/263 (5%)
Query: 187 ISCSKVTDSGIAYLKG--LQKLTLLNLEGCPVTAACLDSLSALG-SLFYLNLNRCQLSDD 243
+ C +T++ + + LQ + L + G VT A ++ +++ G SL ++L+ ++D
Sbjct: 93 VECGCLTEASLGAFRDCDLQDICLGDYPG--VTDAWMEVVASQGQSLLSVDLSCSDVTDS 150
Query: 244 GCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCN 301
G S++ L + ++I++ L L G +NL SL++ C + EG L N
Sbjct: 151 GFNLLKDCSSMQSLACDYCDQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVN 210
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDARQI 360
L L+L + GL HL GL LE +NL + GI+D ++ L+ L++L+ L L + +I
Sbjct: 211 LVNLDLERCPKINGGLIHLKGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKI 270
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLT 414
+ G++ L L L HL+L G +T + +L L + G+ D GLT
Sbjct: 271 SAFGVSYLRGLHKLGHLNLEGCAVTAVCLEVISELASLVLLNLSRCGICDEGCENLKGLT 330
Query: 415 GLVSLNVSNSRITSAGLRHLKPL 437
L +L++ ++IT A L HLK +
Sbjct: 331 KLKALSLGFNQITDACLIHLKVM 353
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 33/161 (20%)
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLTGLTHLDLFG-A 382
+L S++LS + ++D L SS++SL D QI++ GL L+ + LT L + A
Sbjct: 136 SLLSVDLSCSDVTDSGFNLLKDCSSMQSLACDYCDQISEHGLKTLSGFSNLTSLSIKKCA 195
Query: 383 RITDSGAAYLRNFKNL------RSLEICGG-------------------GLTDAG----- 412
+T GA N NL R +I GG G+TD+
Sbjct: 196 AVTAEGAKAFANLVNLVNLDLERCPKINGGLIHLKGLKKLEKLNLRYCNGITDSDMKYLS 255
Query: 413 -LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
LT L L +S+ +I++ G+ +L+ L L L LE C VTA
Sbjct: 256 DLTNLRELQLSSCKISAFGVSYLRGLHKLGHLNLEGCAVTA 296
>gi|255088361|ref|XP_002506103.1| predicted protein [Micromonas sp. RCC299]
gi|226521374|gb|ACO67361.1| predicted protein [Micromonas sp. RCC299]
Length = 610
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 184/495 (37%), Positives = 276/495 (55%), Gaps = 34/495 (6%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
+LP D+SQ++F +LV +R LT F C L + L YPG+ D W+ V+A+ +L
Sbjct: 100 VLPSDLSQRVFEDLVQTRRLTARVTGDFIGCHLTEANLRSYPGLTDDWLAVLATSAPNLS 159
Query: 61 SVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAI 119
S++LSG + +T G L C L+SLD + C ++D L + +S L L+ + I
Sbjct: 160 SINLSGCAALTPDGFNALAACVELESLDVSECPGVNDNALAAVASMSRLRRLACAGCDGI 219
Query: 120 TAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGL 179
T G++ +G L ++LERC + GLV L GL +LE L+ WCN + +D+ L L
Sbjct: 220 TGAGLRYVSGATKLRCVNLERCNGLTNGLVYLSGLTELERLDAGWCNHVDSNDVTSLRSL 279
Query: 180 TNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ 239
LK L ++ +KV D G+A + L L LNL GC +T L L +L L+L C+
Sbjct: 280 KKLKHLNLARTKVDDQGVATIGSLSALETLNLAGCRITDGACFLLGGLTALKELSLEWCR 339
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
+ D G + + + L+VLNLG++ +TDE + HL L L ++LDSC +GD+ L
Sbjct: 340 VGDGGVRRLASLAKLEVLNLGYSSVTDEGVQHLAPLVKLREIDLDSCQVGDDACKALAEW 399
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 359
NL+ + LSDT VG+ GL+ +S LT L +NLS++ +SD + L +S++SL+LD R
Sbjct: 400 PNLEDVNLSDTAVGNLGLKRISKLTRLRRVNLSYSNVSDDGVMYLENAASIRSLSLDTRM 459
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------- 412
+TD GL L L + LDLFGARITD GA +LR+ L++LE+CGGG+TDAG
Sbjct: 460 VTDEGLGYLAKLKDIEELDLFGARITDEGAKHLRHMPRLKTLELCGGGITDAGVKHIGDA 519
Query: 413 -------------------------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 447
L L SLN+ SRI++ G+ L L NL +L L+
Sbjct: 520 CRELTLLNLGQNFRISDAAVPFLLQLHKLGSLNLQYSRISNEGVTQLSQLSNLTTLALKG 579
Query: 448 C-KVTANDIKRLQSR 461
C +V+ ++ L+++
Sbjct: 580 CNRVSQAAVEELRAK 594
>gi|24461848|gb|AAN62335.1|AF506028_2 CTV.1 [Citrus trifoliata]
Length = 205
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 163/261 (62%), Positives = 165/261 (63%), Gaps = 86/261 (32%)
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC 286
LGSLFYLNLNRCQLSDDGCEKFS NLGFNEITDECLV+ +LDSC
Sbjct: 1 LGSLFYLNLNRCQLSDDGCEKFS--------NLGFNEITDECLVY----------HLDSC 42
Query: 287 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAG 346
GIGDEGLVN LSFTGISDGSLRKLAG
Sbjct: 43 GIGDEGLVNY----------------------------------LSFTGISDGSLRKLAG 68
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG 406
LSSLKSLNLDARQITDTGLAALTS HLDLFGARITDSGAAYLRNFKNLRSLEICGG
Sbjct: 69 LSSLKSLNLDARQITDTGLAALTS----AHLDLFGARITDSGAAYLRNFKNLRSLEICGG 124
Query: 407 GLTDAG--------------------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
GLTDAG LT VSNSRITSAGLRH LE
Sbjct: 125 GLTDAGVKHIKDLSSLALLNLSQNCNLTDKTLEYVSNSRITSAGLRH----------PLE 174
Query: 447 SCKVTANDIKRLQSRDLPNLV 467
SCKVTANDIKRLQSRDLPNL
Sbjct: 175 SCKVTANDIKRLQSRDLPNLF 195
>gi|384254255|gb|EIE27729.1| RNI-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 515
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 178/480 (37%), Positives = 264/480 (55%), Gaps = 27/480 (5%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLS 61
LP D++Q + +EL+Y+ L + L F + +L LG+ GV D W+ +A QG+ +
Sbjct: 24 LPADLAQLVLDELIYTASLDQEGLALFSRQHIYNLKLGECAGVEDDWLRHLAPQGTGMHG 83
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
+ ++ SG L +NL+ L C +S L L LS +TSL+ + + I+
Sbjct: 84 LFIT----KHSGAAGL---TNLRDLSLQGCEGLSS--LSALTDLSKVTSLNLKGCSGIS- 133
Query: 122 QGMKAFAGLINLVKLD--LERC-TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
G++ +G + L + C + G G+ +LE+L++ WC+ ITD+D+K L+
Sbjct: 134 -GLRHLSGALFCASLGSVAQMCGSEYWSG--AWAGMKQLENLDLSWCSGITDADVKALAA 190
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNR 237
LT + LQ+S + V DSGI L+ + +L L L GC ++ + S+SAL SL LNL
Sbjct: 191 LTAITGLQLSRTLVADSGIFALRSMSRLRCLGLAGCSGISNGAVGSVSALTSLEELNLEW 250
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
C +S G S + L+ LN+ + D L LTNL +LNLDSC + D GL +++
Sbjct: 251 CTVSVKGLSHLSTLTELRSLNVAYTTAGDNALAAWTSLTNLRTLNLDSCPVSDRGLHHIS 310
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT-GISDGSLRKLAGLSSLKSLNLD 356
L NL+ + LSDT + G+ + L ++ +NLS+T G+ D L +A L++L L+LD
Sbjct: 311 ELTNLEDVNLSDTAITDQGMIAFAPLKGMQRLNLSYTAGVGDLGLAAVARLTALTELHLD 370
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG---- 412
R TD GL + LT L LDLFGARITD+G +LR F+ L LEICGGG++D G
Sbjct: 371 GRSFTDVGLRTIAPLTQLQTLDLFGARITDAGCVHLRPFRRLERLEICGGGISDEGVKEL 430
Query: 413 --LTGLVSLNVS-NSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSF 469
LTGL L+++ N+RIT L L LR L L ++T N I L R L NL S
Sbjct: 431 IWLTGLQHLSLAQNARITDRASLFLSGLSQLRGLNLTGTQLTGNGI--LPLRSLTNLESL 488
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 170/348 (48%), Gaps = 9/348 (2%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI 92
L++L L G+ D + +A+ +++ + LS + V DSG+ L+ S L+ L C
Sbjct: 169 LENLDLSWCSGITDADVKALAAL-TAITGLQLSRTLVADSGIFALRSMSRLRCLGLAGCS 227
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
IS+G + + L++L L+ ++ +G+ + L L L++ T L
Sbjct: 228 GISNGAVGSVSALTSLEELNLEWCT-VSVKGLSHLSTLTELRSLNVAYTTAGDNALAAWT 286
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGI---AYLKGLQKLTLL 209
L L +LN+ C ++D + +S LTNL+ + +S + +TD G+ A LKG+Q+L L
Sbjct: 287 SLTNLRTLNLDSCP-VSDRGLHHISELTNLEDVNLSDTAITDQGMIAFAPLKGMQRLNLS 345
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
G V L +++ L +L L+L+ +D G + + L+ L+L ITD
Sbjct: 346 YTAG--VGDLGLAAVARLTALTELHLDGRSFTDVGLRTIAPLTQLQTLDLFGARITDAGC 403
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS-DTQVGSSGLRHLSGLTNLES 328
VHL+ LE L + GI DEG+ L L L+ L L+ + ++ LSGL+ L
Sbjct: 404 VHLRPFRRLERLEICGGGISDEGVKELIWLTGLQHLSLAQNARITDRASLFLSGLSQLRG 463
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
+NL+ T ++ + L L++L+SL L ++ L L H
Sbjct: 464 LNLTGTQLTGNGILPLRSLTNLESLCLKRTRVKQAAADRLQPLLPRIH 511
>gi|452822896|gb|EME29911.1| leucine-rich repeat family protein [Galdieria sulphuraria]
Length = 588
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 168/458 (36%), Positives = 257/458 (56%), Gaps = 11/458 (2%)
Query: 3 PRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSV 62
PR++ Q++ LV SR L LE + + L V + W+ + + S+L +
Sbjct: 80 PRELIQRLVEYLVESRRLNCEFLETLQQHCVYRLRFTSQLQVTNDWLFYLQNL-STLSRL 138
Query: 63 DLSGSD-VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
+L ++D GL +L + +L LD C+QI+ GL+HL GL L L + IT+
Sbjct: 139 ELKDCKFISDEGLSNLAEIVSLTYLDLAGCVQITSEGLQHLAGLKYLKVLVLKSCKQITS 198
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLV-NLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
+G+ A L NL +LD+E+C+ + + +L L KLE N WC ++D + LS
Sbjct: 199 EGLSYLANLHNLTRLDIEQCSEVSDSFLQSLNRLTKLEDFNCAWCFRLSDEGLTILSNFH 258
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
++ L IS ++V+ + +L G+ +L +L + G + L L SL L++ C +
Sbjct: 259 RMRYLNISKTRVSQNFGRFLPGMPRLRVLKVAGTGFSDRDAQYLRGLYSLRELDVEGCSV 318
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
D + ++ LNLG+ +I++ + ++L + L+ LNLDSC IGD + +L+ L
Sbjct: 319 GDPFLATIYALPRIRKLNLGYTKISERGVSLYLGNMLKLQYLNLDSCLIGDFAVEHLSRL 378
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 359
LKCL+L+DT V SSGL L+ LT+LE++ L++T +S+ L L L+ L+SL+LD R
Sbjct: 379 EQLKCLDLTDTTVSSSGLSGLANLTSLETLILAYTSVSNSGLEHLKNLTKLESLSLDTRG 438
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT----- 414
I+D GLA L L L HLDLFGA++TD+G ++ L SLE+C GG+TDAGL
Sbjct: 439 ISDDGLAYLKKLKHLKHLDLFGAKVTDNGLRHISEISTLESLEVCAGGVTDAGLESIGKL 498
Query: 415 -GLVSLNVS-NSRITSAGLRHLKPLKNLRSLTLESCKV 450
L +LN+S N RIT AGL HL L +L SL L V
Sbjct: 499 RALRTLNLSQNHRITDAGLIHLSCLSHLTSLNLSYTNV 536
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 189/377 (50%), Gaps = 22/377 (5%)
Query: 86 LDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIH 145
L F +Q+++ L +L+ LS L+ L + I+ +G+ A +++L LDL C +I
Sbjct: 113 LRFTSQLQVTNDWLFYLQNLSTLSRLELKDCKFISDEGLSNLAEIVSLTYLDLAGCVQIT 172
Query: 146 G-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGL 203
GL +L GL L+ L +K C IT + L+ L NL L I CS+V+DS + L L
Sbjct: 173 SEGLQHLAGLKYLKVLVLKSCKQITSEGLSYLANLHNLTRLDIEQCSEVSDSFLQSLNRL 232
Query: 204 QKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
KL N C ++ L LS + YLN+++ ++S + + L+VL +
Sbjct: 233 TKLEDFNCAWCFRLSDEGLTILSNFHRMRYLNISKTRVSQNFGRFLPGMPRLRVLKVAGT 292
Query: 263 EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR-HLS 321
+D +L+GL +L L+++ C +GD L + L ++ L L T++ G+ +L
Sbjct: 293 GFSDRDAQYLRGLYSLRELDVEGCSVGDPFLATIYALPRIRKLNLGYTKISERGVSLYLG 352
Query: 322 GLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG 381
+ L+ +NL I D ++ L+ L LK L+L ++ +GL+ L +LT L L L
Sbjct: 353 NMLKLQYLNLDSCLIGDFAVEHLSRLEQLKCLDLTDTTVSSSGLSGLANLTSLETLILAY 412
Query: 382 ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLR 441
+++SG +L+N L SL + G++D GL +LK LK+L+
Sbjct: 413 TSVSNSGLEHLKNLTKLESLSLDTRGISDDGLA------------------YLKKLKHLK 454
Query: 442 SLTLESCKVTANDIKRL 458
L L KVT N ++ +
Sbjct: 455 HLDLFGAKVTDNGLRHI 471
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 132/257 (51%), Gaps = 10/257 (3%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGL-IHLKDCSNLQSLDFNFCIQISDGGLEHL 102
V D ++ I + + ++L + +++ G+ ++L + LQ L+ + C+ I D +EHL
Sbjct: 318 VGDPFLATIYAL-PRIRKLNLGYTKISERGVSLYLGNMLKLQYLNLDSCL-IGDFAVEHL 375
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
L L L + +++ G+ A L +L L L + + GL +LK L KLESL++
Sbjct: 376 SRLEQLKCLDLT-DTTVSSSGLSGLANLTSLETLILAYTSVSNSGLEHLKNLTKLESLSL 434
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP--VTAAC 220
I+D + L L +LK L + +KVTD+G+ ++ + TL +LE C VT A
Sbjct: 435 D-TRGISDDGLAYLKKLKHLKHLDLFGAKVTDNGLRHISEIS--TLESLEVCAGGVTDAG 491
Query: 221 LDSLSALGSLFYLNLNR-CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
L+S+ L +L LNL++ +++D G S + L LNL + + D ++ +L
Sbjct: 492 LESIGKLRALRTLNLSQNHRITDAGLIHLSCLSHLTSLNLSYTNVGDGICSLVQKCPSLR 551
Query: 280 SLNLDSCGIGDEGLVNL 296
+ ++ CG+ + L
Sbjct: 552 MIGIERCGLSIAAKIRL 568
>gi|59802533|gb|AAX07510.1| putative regulatory subunit [Gemmata sp. Wa1-1]
Length = 550
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 241/422 (57%), Gaps = 13/422 (3%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L S++L + VTD+GL LK + L SLD +++D GL+ L+GL++LT L R
Sbjct: 90 TNLTSLNLGSTGVTDAGLQDLKGLNKLASLDLR-GTEVTDVGLQELKGLNSLTELRLRAT 148
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+T G++ GL NL LDL R TR+ GL LKGL L SL+++ +TD+ +K
Sbjct: 149 E-VTNVGLQELKGLNNLASLDL-RDTRVTDVGLQELKGLNNLASLDLRDTK-VTDTGLKE 205
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L GLTNL +L + ++VTD G+ L GL KL L+L VT L L + L L+L
Sbjct: 206 LKGLTNLTALDLFSTQVTDVGLKELNGLTKLASLDLSRTGVTGTGLIELKSFTKLALLDL 265
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
+ +++D G + + SL L+LG +TD L LKGLT+L SL+L D GL
Sbjct: 266 SGTRVTDAGLHQLKGLTSLTSLHLGGTRVTDVGLKELKGLTSLTSLHLSGTRTTDAGLQE 325
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L GL NL L LSDT+V GL+ L T L S++L TG++D L++L GL++L +L+L
Sbjct: 326 LNGLTNLTSLHLSDTRVTDVGLKELKSFTKLTSLHLGGTGVTDTGLKELKGLTNLTALDL 385
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA---- 411
+ Q+TD GL L LT LT L L A ITD+G L+ L L++ G +TDA
Sbjct: 386 FSTQVTDVGLQELNGLTKLTSLYLSAAAITDTGLKELKELTQLALLDLSGTRVTDAGLQE 445
Query: 412 --GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSF 469
GLT L L + +R+T AGL+ LK L +L SL L +VT ++ L L NL +
Sbjct: 446 LSGLTKLAFLRLGGTRVTDAGLKELKGLTSLTSLHLSGTRVTDAGLQELSG--LTNLTTT 503
Query: 470 RP 471
P
Sbjct: 504 GP 505
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 156/409 (38%), Positives = 234/409 (57%), Gaps = 9/409 (2%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L S+ LS + VT+ GL LK+ +NL +LD F ++D GL+ L+GL+NLTSL+
Sbjct: 18 ANLTSLGLSATKVTNEGLKELKELTNLTALDL-FSTGVTDTGLQELKGLTNLTSLNLGVT 76
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+T G++ GL NL L+L GL +LKGL KL SL+++ +TD ++ L
Sbjct: 77 Q-VTGAGLQELKGLTNLTSLNLGSTGVTDAGLQDLKGLNKLASLDLRGTE-VTDVGLQEL 134
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
GL +L L++ ++VT+ G+ LKGL L L+L VT L L L +L L+L
Sbjct: 135 KGLNSLTELRLRATEVTNVGLQELKGLNNLASLDLRDTRVTDVGLQELKGLNNLASLDLR 194
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
+++D G ++ + +L L+L ++TD L L GLT L SL+L G+ GL+ L
Sbjct: 195 DTKVTDTGLKELKGLTNLTALDLFSTQVTDVGLKELNGLTKLASLDLSRTGVTGTGLIEL 254
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
L L+LS T+V +GL L GLT+L S++L T ++D L++L GL+SL SL+L
Sbjct: 255 KSFTKLALLDLSGTRVTDAGLHQLKGLTSLTSLHLGGTRVTDVGLKELKGLTSLTSLHLS 314
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA----- 411
+ TD GL L LT LT L L R+TD G L++F L SL + G G+TD
Sbjct: 315 GTRTTDAGLQELNGLTNLTSLHLSDTRVTDVGLKELKSFTKLTSLHLGGTGVTDTGLKEL 374
Query: 412 -GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
GLT L +L++ ++++T GL+ L L L SL L + +T +K L+
Sbjct: 375 KGLTNLTALDLFSTQVTDVGLQELNGLTKLTSLYLSAAAITDTGLKELK 423
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 206/377 (54%), Gaps = 32/377 (8%)
Query: 90 FCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLV 149
F Q++D GL+ L+GL+NLTSL +T +G+K L NL LDL
Sbjct: 2 FSTQVTDAGLQELKGLANLTSLGLSATK-VTNEGLKELKELTNLTALDL----------- 49
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
+ +TD+ ++ L GLTNL SL + ++VT +G+ LKGL LT L
Sbjct: 50 --------------FSTGVTDTGLQELKGLTNLTSLNLGVTQVTGAGLQELKGLTNLTSL 95
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
NL VT A L L L L L+L +++D G ++ + SL L L E+T+ L
Sbjct: 96 NLGSTGVTDAGLQDLKGLNKLASLDLRGTEVTDVGLQELKGLNSLTELRLRATEVTNVGL 155
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
LKGL NL SL+L + D GL L GL NL L+L DT+V +GL+ L GLTNL ++
Sbjct: 156 QELKGLNNLASLDLRDTRVTDVGLQELKGLNNLASLDLRDTKVTDTGLKELKGLTNLTAL 215
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGA 389
+L T ++D L++L GL+ L SL+L +T TGL L S T L LDL G R+TD+G
Sbjct: 216 DLFSTQVTDVGLKELNGLTKLASLDLSRTGVTGTGLIELKSFTKLALLDLSGTRVTDAGL 275
Query: 390 AYLRNFKNLRSLEICGGGLTDA------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSL 443
L+ +L SL + G +TD GLT L SL++S +R T AGL+ L L NL SL
Sbjct: 276 HQLKGLTSLTSLHLGGTRVTDVGLKELKGLTSLTSLHLSGTRTTDAGLQELNGLTNLTSL 335
Query: 444 TLESCKVTANDIKRLQS 460
L +VT +K L+S
Sbjct: 336 HLSDTRVTDVGLKELKS 352
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 220/398 (55%), Gaps = 9/398 (2%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
+ VTD+GL LK +NL SL + ++++ GL+ L+ L+NLT+L + +T G++
Sbjct: 4 TQVTDAGLQELKGLANLTSLGLS-ATKVTNEGLKELKELTNLTALDLF-STGVTDTGLQE 61
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
GL NL L+L GL LKGL L SLN+ +TD+ ++ L GL L SL
Sbjct: 62 LKGLTNLTSLNLGVTQVTGAGLQELKGLTNLTSLNL-GSTGVTDAGLQDLKGLNKLASLD 120
Query: 187 ISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCE 246
+ ++VTD G+ LKGL LT L L VT L L L +L L+L +++D G +
Sbjct: 121 LRGTEVTDVGLQELKGLNSLTELRLRATEVTNVGLQELKGLNNLASLDLRDTRVTDVGLQ 180
Query: 247 KFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE 306
+ + +L L+L ++TD L LKGLTNL +L+L S + D GL L GL L L+
Sbjct: 181 ELKGLNNLASLDLRDTKVTDTGLKELKGLTNLTALDLFSTQVTDVGLKELNGLTKLASLD 240
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA 366
LS T V +GL L T L ++LS T ++D L +L GL+SL SL+L ++TD GL
Sbjct: 241 LSRTGVTGTGLIELKSFTKLALLDLSGTRVTDAGLHQLKGLTSLTSLHLGGTRVTDVGLK 300
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL------TGLVSLN 420
L LT LT L L G R TD+G L NL SL + +TD GL T L SL+
Sbjct: 301 ELKGLTSLTSLHLSGTRTTDAGLQELNGLTNLTSLHLSDTRVTDVGLKELKSFTKLTSLH 360
Query: 421 VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
+ + +T GL+ LK L NL +L L S +VT ++ L
Sbjct: 361 LGGTGVTDTGLKELKGLTNLTALDLFSTQVTDVGLQEL 398
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 108/191 (56%), Gaps = 8/191 (4%)
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
S + D GL L GL NL L LS T+V + GL+ L LTNL +++L TG++D L++L
Sbjct: 3 STQVTDAGLQELKGLANLTSLGLSATKVTNEGLKELKELTNLTALDLFSTGVTDTGLQEL 62
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
GL++L SLNL Q+T GL L LT LT L+L +TD+G L+ L SL++
Sbjct: 63 KGLTNLTSLNLGVTQVTGAGLQELKGLTNLTSLNLGSTGVTDAGLQDLKGLNKLASLDLR 122
Query: 405 GGGLTDAGLTGLVSLN------VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
G +TD GL L LN + + +T+ GL+ LK L NL SL L +VT D+
Sbjct: 123 GTEVTDVGLQELKGLNSLTELRLRATEVTNVGLQELKGLNNLASLDLRDTRVT--DVGLQ 180
Query: 459 QSRDLPNLVSF 469
+ + L NL S
Sbjct: 181 ELKGLNNLASL 191
>gi|147821391|emb|CAN67937.1| hypothetical protein VITISV_014237 [Vitis vinifera]
Length = 216
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 114/178 (64%), Positives = 138/178 (77%), Gaps = 17/178 (9%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
MLPRDISQQIF+ V S CLT SLEAFRDCA+QD+ LG+YP VND WMD+I+SQG SLL
Sbjct: 47 MLPRDISQQIFDNFVDSHCLTSASLEAFRDCAIQDVNLGEYPEVNDSWMDIISSQGLSLL 106
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
SVDLSGS VTD GL LKDCSN+Q L FN+C QIS+ GL+++ GLSNLTSLSF+++N +T
Sbjct: 107 SVDLSGSSVTDDGLSLLKDCSNIQVLSFNYCDQISEPGLKNISGLSNLTSLSFKKSNTVT 166
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
A+GM+AF+ L+NL KLDLERC+RIHGGL++LK DSD+K LSG
Sbjct: 167 AEGMRAFSSLVNLAKLDLERCSRIHGGLIHLK-----------------DSDLKALSG 207
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 10/128 (7%)
Query: 349 SLKSLNL-DARQITDTGLAALTSL-TGLTHLDLFGARITDSGAAYLRNFKNLRSL----- 401
+++ +NL + ++ D+ + ++S L +DL G+ +TD G + L++ N++ L
Sbjct: 78 AIQDVNLGEYPEVNDSWMDIISSQGLSLLSVDLSGSSVTDDGLSLLKDCSNIQVLSFNYC 137
Query: 402 -EICGGGLTD-AGLTGLVSLNVSNSR-ITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
+I GL + +GL+ L SL+ S +T+ G+R L NL L LE C + L
Sbjct: 138 DQISEPGLKNISGLSNLTSLSFKKSNTVTAEGMRAFSSLVNLAKLDLERCSRIHGGLIHL 197
Query: 459 QSRDLPNL 466
+ DL L
Sbjct: 198 KDSDLKAL 205
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+ I++QG+ +L+ +DL + GL LK ++ L+ +C+ I++ +K +
Sbjct: 96 DIISSQGL-------SLLSVDLSGSSVTDDGLSLLKDCSNIQVLSFNYCDQISEPGLKNI 148
Query: 177 SGLTNLKSLQISCSK-VTDSGIAYLKGLQKLTLLNLEGC 214
SGL+NL SL S VT G+ L L L+LE C
Sbjct: 149 SGLSNLTSLSFKKSNTVTAEGMRAFSSLVNLAKLDLERC 187
>gi|303286333|ref|XP_003062456.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455973|gb|EEH53275.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 519
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 161/495 (32%), Positives = 257/495 (51%), Gaps = 33/495 (6%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLS 61
LP D++Q++F+ L + LT +L F C L D V D ++ + +SL
Sbjct: 1 LPPDLAQRVFDVLARANELTVDALGRFEGCFLSDASGLDANVVTDAFLAALRDVATSLSR 60
Query: 62 VDLSGSDVTDSGLI--HLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAI 119
+DL+G D SG + + C+ + ++ + C + D L + ++L S N+A+
Sbjct: 61 IDLTGCDALTSGGLRSNFPCCARMTIVNVSECAGVDDDALAAMASATHLKSFFCEGNDAV 120
Query: 120 TAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM------ 173
T G++ A L +L +L ERC R+ G+ +L GL L SLN+ WC ++ +
Sbjct: 121 TGSGVRHLASLTSLRELSFERCARLREGMCHLAGLRNLRSLNLGWCGKLSAKETSRALTP 180
Query: 174 -------KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA 226
P S L + + T + L G +L LN+ GC + L L
Sbjct: 181 FFPASASAPRSTPIELSLARTGANADTARALGQLAG--RLVALNVSGCAMNDDALHFLGG 238
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC 286
L +L L+L RC++SD G + + L+ LNLG+ +T++ ++ L LT L +NLDS
Sbjct: 239 LINLRSLSLERCRVSDVGVRQLCGLRDLRELNLGYTRVTNDGVLALAPLTELRVVNLDSL 298
Query: 287 G-IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
G +GD G+ L+ L +SDT VG G+R L L +NL +T ++D L L
Sbjct: 299 GDVGDAGMEVARRWEKLESLCVSDTGVGDGGVRKLKSCARLRDLNLGYTNVTDDGLEHLE 358
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK---NLRSLE 402
++SL++LNLD+R ITD G+ L +L LT +DLFGA+I+D GA+ L FK L LE
Sbjct: 359 DMTSLRNLNLDSRLITDDGVRHLANLGALTAIDLFGAKISDEGASRL--FKCTPKLERLE 416
Query: 403 ICGGGLTDAGL-------TGLVSLNVS-NSRITSAGLRHLKPLKNLRSLTLESCKVTAND 454
+CGG LT+ G+ G+ +LN+ N++IT + + ++ L SL L K+T++
Sbjct: 417 LCGGSLTNVGVKRIAEHCKGMKTLNIGRNAKITDDCVDDVVTMRELTSLNLAFSKITSDG 476
Query: 455 IKRLQSRDLPNLVSF 469
+++L + LP L S
Sbjct: 477 VRKLAA--LPCLTSL 489
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 31/198 (15%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
V D M+V A + L S+ +S + V D G+ LK C+ L+ L+ + ++D GLEHL
Sbjct: 301 VGDAGMEV-ARRWEKLESLCVSDTGVGDGGVRKLKSCARLRDLNLGY-TNVTDDGLEHLE 358
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL--------------------ERCTR 143
+++L +L+ + IT G++ A L L +DL ER
Sbjct: 359 DMTSLRNLNLD-SRLITDDGVRHLANLGALTAIDLFGAKISDEGASRLFKCTPKLERLEL 417
Query: 144 IHGGLVNLKGLMK-------LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG 196
G L N+ G+ + +++LNI ITD + + + L SL ++ SK+T G
Sbjct: 418 CGGSLTNV-GVKRIAEHCKGMKTLNIGRNAKITDDCVDDVVTMRELTSLNLAFSKITSDG 476
Query: 197 IAYLKGLQKLTLLNLEGC 214
+ L L LT L ++GC
Sbjct: 477 VRKLAALPCLTSLAIKGC 494
>gi|307107435|gb|EFN55678.1| hypothetical protein CHLNCDRAFT_133919 [Chlorella variabilis]
Length = 553
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 169/463 (36%), Positives = 250/463 (53%), Gaps = 52/463 (11%)
Query: 20 LTEVSLEAFRDCALQDLCLGQYPG-VNDKWMDVIASQGSSLLSVDLSGSDVT--DSGLIH 76
L+ + L FR L LG YP V W+ +++ SL + DLS ++ + D L
Sbjct: 65 LSGLGLHFFR------LPLGAYPERVQPSWLRCLST--PSLEAADLSKTEASGMDEVLAS 116
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
L +L L ++C+ ++DGGL L+G+++L LS +TA GM GL L +L
Sbjct: 117 LGPTPHLAQLCLDYCVDLTDGGLALLQGMTSLEELSLAGCELLTAVGMGHLRGLTRLRRL 176
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG 196
L+ C +I L L L +LE L++ WC+ + DSD ++VTD G
Sbjct: 177 SLQTCHQI--SLAPLAQLRQLEQLDVGWCSSLDDSD-----------------AQVTDHG 217
Query: 197 IAYLKGLQKLTLLNLEGCPVTAACLDSL-SALGSLFYLNLNRC-QLSDDGCEKFSKIG-S 253
+A L L +L LNL G V+ L +L L L LNL RC Q D S+
Sbjct: 218 LACLHSLGQLRALNLAGVRVSDEALAALLRHLPHLRALNLERCLQAGDASLAAVSQRALQ 277
Query: 254 LKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVG 313
L+ L+LG+ ++D L+ L GLT L L+L++C +GD GL L+ L ++ L+LSDT
Sbjct: 278 LRELHLGYTAVSDRGLLLLGGLTQLHVLSLENCSVGDGGLAVLSHLTQMRQLDLSDTSAS 337
Query: 314 SSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 373
+ + ++ + LE +NLSFTG++D L++L LSSL+ LNLD+R TD G+ ++ L G
Sbjct: 338 NETMSTVAAMRQLECLNLSFTGVNDLGLKRLRRLSSLRCLNLDSRHFTDAGMVSVAQLAG 397
Query: 374 LTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSL-------------- 419
L LDLFGARI D+G A L KNLR LE+CGGG+TDAG+ LV+L
Sbjct: 398 LECLDLFGARIGDAGCASLSKLKNLRRLEVCGGGVTDAGVAHLVALTRLQHLSLAQASAC 457
Query: 420 ----NVSNSRITSAGLRHLKPLKNLRSLTL-ESCKVTANDIKR 457
+ N R++++ + HL L L +L L ++C T ++ R
Sbjct: 458 WGSCTLPNYRVSNSCILHLIKLNELMALNLSQACACTTQNLHR 500
>gi|219122964|ref|XP_002181805.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407081|gb|EEC47019.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 486
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 155/492 (31%), Positives = 242/492 (49%), Gaps = 51/492 (10%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLS 61
LP+D+ I L+ L +L R+C L L L GV D+W++ ++++ S
Sbjct: 1 LPQDVVDDILQSLIRHSALNATTLRILRNCELGVLSLSGCRGVTDEWLEALSAESSD--- 57
Query: 62 VDLSGSDVTDSGLIHLKDCS----NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
S + + + H S N LD +++D GL L L L +
Sbjct: 58 ---SPPHLRTALMWHPCAASSALTNTTLLDLRGSQRLTDRGLMQLHDLGRLEVAKLDNCH 114
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
++ +G+ + L L L C R+ +VN+ L L++L++ C CITD + L
Sbjct: 115 SVVGRGLVVLSSSPRLHTLSLTNCRRLTDEAIVNISHLQSLQALSLDGCRCITDFSLAAL 174
Query: 177 SGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSAL----GSL 230
+ + NL+ L +S C +T+ G+ L+ LQ+L ++L C V+ A + +L+A +L
Sbjct: 175 ADMYNLRKLGLSQCDLITNEGLKALEHLQRLQEISLGWCRQVSDAGIQTLTAQPGRSSNL 234
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L L RC ++D+G + KI ++K L L ++ + D L L L LE LNLDSC IGD
Sbjct: 235 QILRLARCPITDEGVQYLGKIRNVKTLELCYSAVKDIHLTKLVNLPMLEELNLDSCPIGD 294
Query: 291 ---EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
+ N L NL L+L+D+ + G+ ++ T L+ ++L + IS+ LR L+ L
Sbjct: 295 LAIQHFANHNVLPNLVSLDLADSDISDLGMVQIAKFTKLKRLSLFYCSISNRGLRHLSIL 354
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGG 407
+ L+ LNLD+R I+D GL L L L LD+F R+TD G YL K L SLE+CGGG
Sbjct: 355 TELRVLNLDSRDISDDGLRHLQHLKQLKSLDIFSGRVTDLGCTYLSKIKTLESLELCGGG 414
Query: 408 LTDAGLTGLVSL-------------------------------NVSNSRITSAGLRHLKP 436
+ DAG L L N+S++R+ ++ LR+
Sbjct: 415 VRDAGCASLAKLENLTSLNLSQNERITNRGAAALAALSKLKALNLSHTRVNASALRYFSG 474
Query: 437 LKNLRSLTLESC 448
L NL+SL L C
Sbjct: 475 LMNLQSLALYGC 486
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 177/394 (44%), Gaps = 55/394 (13%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
L++C L L + C ++D LE L S+ + R A+ A + L N L
Sbjct: 27 LRNC-ELGVLSLSGCRGVTDEWLEALSAESSDSPPHLR--TALMWHPCAASSALTNTTLL 83
Query: 137 DLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTD 194
DL R+ GL+ L L +LE + C+ + + LS L +L ++ C ++TD
Sbjct: 84 DLRGSQRLTDRGLMQLHDLGRLEVAKLDNCHSVVGRGLVVLSSSPRLHTLSLTNCRRLTD 143
Query: 195 SGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGS 253
I + LQ L L+L+GC +T L +L+ + +L L L++C L
Sbjct: 144 EAIVNISHLQSLQALSLDGCRCITDFSLAALADMYNLRKLGLSQCDL------------- 190
Query: 254 LKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGL----CNLKCLELS 308
IT+E L L+ L L+ ++L C + D G+ LT NL+ L L+
Sbjct: 191 ----------ITNEGLKALEHLQRLQEISLGWCRQVSDAGIQTLTAQPGRSSNLQILRLA 240
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
+ G+++L + N++++ L ++ + D L KL L L+ LNLD+ I D +
Sbjct: 241 RCPITDEGVQYLGKIRNVKTLELCYSAVKDIHLTKLVNLPMLEELNLDSCPIGDLAIQHF 300
Query: 369 TS---LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSR 425
+ L L LDL + I+D G + F L+ L L ++SN
Sbjct: 301 ANHNVLPNLVSLDLADSDISDLGMVQIAKFTKLKRL-------------SLFYCSISNR- 346
Query: 426 ITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
GLRHL L LR L L+S ++ + ++ LQ
Sbjct: 347 ----GLRHLSILTELRVLNLDSRDISDDGLRHLQ 376
>gi|147832652|emb|CAN74892.1| hypothetical protein VITISV_002002 [Vitis vinifera]
Length = 300
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 122/181 (67%), Positives = 136/181 (75%), Gaps = 31/181 (17%)
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
+ GL NLESINLSFT ++D LRK + LSSLKSLNLDA QITD GLAALTSLTGLTHLDL
Sbjct: 113 MEGLANLESINLSFTAVTDSGLRKSSALSSLKSLNLDAHQITDAGLAALTSLTGLTHLDL 172
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTDA---------------------------- 411
FGARITDSG +YLRNFKNL+SLEICGGGLTDA
Sbjct: 173 FGARITDSGTSYLRNFKNLQSLEICGGGLTDAGVKNIKDLTCLTVLNLSQNCNLTDKSLE 232
Query: 412 ---GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVS 468
GLT LVSL+VSNSRIT+AGL+HLK LKNL+SLTL+SCKVT NDIK+LQS+DLPNL +
Sbjct: 233 LISGLTALVSLSVSNSRITNAGLQHLKQLKNLKSLTLDSCKVTVNDIKKLQSKDLPNLPA 292
Query: 469 F 469
F
Sbjct: 293 F 293
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 24/165 (14%)
Query: 148 LVNLKGLMKLESLNIKW-----------------------CNCITDSDMKPLSGLTNLKS 184
VN++GL LES+N+ + + ITD+ + L+ LT L
Sbjct: 110 FVNMEGLANLESINLSFTAVTDSGLRKSSALSSLKSLNLDAHQITDAGLAALTSLTGLTH 169
Query: 185 LQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR-CQLSDD 243
L + +++TDSG +YL+ + L L + G +T A + ++ L L LNL++ C L+D
Sbjct: 170 LDLFGARITDSGTSYLRNFKNLQSLEICGGGLTDAGVKNIKDLTCLTVLNLSQNCNLTDK 229
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
E S + +L L++ + IT+ L HLK L NL+SL LDSC +
Sbjct: 230 SLELISGLTALVSLSVSNSRITNAGLQHLKQLKNLKSLTLDSCKV 274
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 90/163 (55%), Gaps = 4/163 (2%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L S++LS + VTDSGL S+L+SL+ + QI+D GL L L+ LT L
Sbjct: 117 ANLESINLSFTAVTDSGLRKSSALSSLKSLNLD-AHQITDAGLAALTSLTGLTHLDLF-G 174
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNC-ITDSDMKP 175
IT G NL L++ G+ N+K L L LN+ NC +TD ++
Sbjct: 175 ARITDSGTSYLRNFKNLQSLEICGGGLTDAGVKNIKDLTCLTVLNLSQ-NCNLTDKSLEL 233
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
+SGLT L SL +S S++T++G+ +LK L+ L L L+ C VT
Sbjct: 234 ISGLTALVSLSVSNSRITNAGLQHLKQLKNLKSLTLDSCKVTV 276
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 121/253 (47%), Gaps = 24/253 (9%)
Query: 152 KGLMKLESLNIKWCNCI---TDSDMKPLSGLTNLKSLQ---------ISCSKVTDSGIAY 199
+G + LE NI W + D+ + GL +++ + I K+T S I +
Sbjct: 45 EGSLDLEKANI-WLGTLLLERSEDIYRMKGLLSVQGMDERFVFQDYLILFYKITTSLIPF 103
Query: 200 ---------LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
++GL L +NL VT + L SAL SL LNL+ Q++D G +
Sbjct: 104 FYTILLFVNMEGLANLESINLSFTAVTDSGLRKSSALSSLKSLNLDAHQITDAGLAALTS 163
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
+ L L+L ITD +L+ NL+SL + G+ D G+ N+ L L L LS
Sbjct: 164 LTGLTHLDLFGARITDSGTSYLRNFKNLQSLEICGGGLTDAGVKNIKDLTCLTVLNLSQN 223
Query: 311 -QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALT 369
+ L +SGLT L S+++S + I++ L+ L L +LKSL LD+ ++T + L
Sbjct: 224 CNLTDKSLELISGLTALVSLSVSNSRITNAGLQHLKQLKNLKSLTLDSCKVTVNDIKKLQ 283
Query: 370 SLTGLTHLDLFGA 382
S L +L F A
Sbjct: 284 S-KDLPNLPAFAA 295
>gi|46446666|ref|YP_008031.1| hypothetical protein pc1032 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400307|emb|CAF23756.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 734
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 153/403 (37%), Positives = 221/403 (54%), Gaps = 17/403 (4%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
VTD+GL HL + LQ LD + C +++D GL HL L+ L L +++T G+
Sbjct: 262 VTDAGLAHLTPLTTLQYLDLSDCEKLTDDGLAHLTPLTGLQHLDLSWCSSLTDAGLAHLT 321
Query: 129 GLINLVKLDLERCTRIH-GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L L L+L RC + GL +L L L+ LN+ C +TD+ + L LT L+ L +
Sbjct: 322 PLTALQHLNLNRCEYLKDAGLAHLTPLTGLQHLNLNRCKDLTDAGLSHLKPLTALQHLNL 381
Query: 188 S-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQ-LSDDG 244
S C K+TD+G+A+L L L L+L C +T A L L+ L +L +L+L+ CQ +D G
Sbjct: 382 SECWKLTDAGLAHLTPLTALQHLDLSRCNSLTDAGLAHLTPLTALQHLDLSDCQNFTDAG 441
Query: 245 CEKFSKIGSLKVLNLG-FNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNL 302
+ + L+ LNL + +TD L HL LT L+ LNL +C D GL +LT L L
Sbjct: 442 LAHLTSLTGLQYLNLSEYKNLTDAGLAHLTPLTALQHLNLCNCRKFTDNGLAHLTPLTAL 501
Query: 303 KCLELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDARQI 360
+ L+LS + + GL HL+ LT L+ + LS+ ++D L L L++L+ L+L +I
Sbjct: 502 QHLDLSHCKNLTDDGLAHLAPLTGLQRLVLSWCDKLTDAGLAHLTPLTALQYLDLSCCEI 561
Query: 361 TDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGLVS 418
TD GLA LT LTGL HL L + ++TD+G A+L L+ L + LTDAGL L
Sbjct: 562 TDAGLAHLTPLTGLQHLVLVYCWQLTDAGLAHLTPLTTLQYLYLGSCNRLTDAGLAHLAP 621
Query: 419 LNVSNS-------RITSAGLRHLKPLKNLRSLTLESCKVTAND 454
L ++T GL HL PL L+ LTL C+ +D
Sbjct: 622 LTALQHLALNDCRKLTDTGLAHLTPLTALQHLTLNRCEKLTDD 664
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 163/451 (36%), Positives = 240/451 (53%), Gaps = 20/451 (4%)
Query: 20 LTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD-VTDSGLIHL 77
LT+ L ++C L+ L + GV D + + + ++L +DLS + +TD GL HL
Sbjct: 237 LTDAHLLTLKNCKNLKILHFKKCWGVTDAGLAHL-TPLTTLQYLDLSDCEKLTDDGLAHL 295
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLD 137
+ LQ LD ++C ++D GL HL L+ L L+ R + G+ L L L+
Sbjct: 296 TPLTGLQHLDLSWCSSLTDAGLAHLTPLTALQHLNLNRCEYLKDAGLAHLTPLTGLQHLN 355
Query: 138 LERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDS 195
L RC + GL +LK L L+ LN+ C +TD+ + L+ LT L+ L +S C+ +TD+
Sbjct: 356 LNRCKDLTDAGLSHLKPLTALQHLNLSECWKLTDAGLAHLTPLTALQHLDLSRCNSLTDA 415
Query: 196 GIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGS 253
G+A+L L L L+L C T A L L++L L YLNL+ + L+D G + + +
Sbjct: 416 GLAHLTPLTALQHLDLSDCQNFTDAGLAHLTSLTGLQYLNLSEYKNLTDAGLAHLTPLTA 475
Query: 254 LKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-T 310
L+ LNL + TD L HL LT L+ L+L C + D+GL +L L L+ L LS
Sbjct: 476 LQHLNLCNCRKFTDNGLAHLTPLTALQHLDLSHCKNLTDDGLAHLAPLTGLQRLVLSWCD 535
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALT 369
++ +GL HL+ LT L+ ++LS I+D L L L+ L+ L L Q+TD GLA LT
Sbjct: 536 KLTDAGLAHLTPLTALQYLDLSCCEITDAGLAHLTPLTGLQHLVLVYCWQLTDAGLAHLT 595
Query: 370 SLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGLVSLNVSN---- 423
LT L +L L R+TD+G A+L L+ L + LTD GL L L
Sbjct: 596 PLTTLQYLYLGSCNRLTDAGLAHLAPLTALQHLALNDCRKLTDTGLAHLTPLTALQHLTL 655
Query: 424 ---SRITSAGLRHLKPLKNLRSLTLESCKVT 451
++T GL HLKPL L+ L L C++T
Sbjct: 656 NRCEKLTDDGLAHLKPLAALQYLDLSYCEIT 686
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 153/422 (36%), Positives = 229/422 (54%), Gaps = 19/422 (4%)
Query: 57 SSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
+ L +DLS S +TD+GL HL + LQ L+ N C + D GL HL L+ L L+ R
Sbjct: 299 TGLQHLDLSWCSSLTDAGLAHLTPLTALQHLNLNRCEYLKDAGLAHLTPLTGLQHLNLNR 358
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
+T G+ L L L+L C ++ GL +L L L+ L++ CN +TD+ +
Sbjct: 359 CKDLTDAGLSHLKPLTALQHLNLSECWKLTDAGLAHLTPLTALQHLDLSRCNSLTDAGLA 418
Query: 175 PLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNL-EGCPVTAACLDSLSALGSLFY 232
L+ LT L+ L +S C TD+G+A+L L L LNL E +T A L L+ L +L +
Sbjct: 419 HLTPLTALQHLDLSDCQNFTDAGLAHLTSLTGLQYLNLSEYKNLTDAGLAHLTPLTALQH 478
Query: 233 LNLNRC-QLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCG-IG 289
LNL C + +D+G + + +L+ L+L +TD+ L HL LT L+ L L C +
Sbjct: 479 LNLCNCRKFTDNGLAHLTPLTALQHLDLSHCKNLTDDGLAHLAPLTGLQRLVLSWCDKLT 538
Query: 290 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLS 348
D GL +LT L L+ L+LS ++ +GL HL+ LT L+ + L + ++D L L L+
Sbjct: 539 DAGLAHLTPLTALQYLDLSCCEITDAGLAHLTPLTGLQHLVLVYCWQLTDAGLAHLTPLT 598
Query: 349 SLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEI--C 404
+L+ L L + ++TD GLA L LT L HL L R +TD+G A+L L+ L + C
Sbjct: 599 TLQYLYLGSCNRLTDAGLAHLAPLTALQHLALNDCRKLTDTGLAHLTPLTALQHLTLNRC 658
Query: 405 GGGLTDAGLT------GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
LTD GL L L++S IT AGL HL L L+ L L ++T + ++R
Sbjct: 659 EK-LTDDGLAHLKPLAALQYLDLSYCEITDAGLAHLTHLMALQRLDLYGREITDDGLERF 717
Query: 459 QS 460
++
Sbjct: 718 ET 719
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 175/359 (48%), Gaps = 66/359 (18%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
K+E+LN +TD+ + L NLK L C VTD+G+A+L L L L+L C
Sbjct: 225 KIETLNFSENARLTDAHLLTLKNCKNLKILHFKKCWGVTDAGLAHLTPLTTLQYLDLSDC 284
Query: 215 ------------PVTA--------------ACLDSLSALGSLFYLNLNRCQ-LSDDGCEK 247
P+T A L L+ L +L +LNLNRC+ L D G
Sbjct: 285 EKLTDDGLAHLTPLTGLQHLDLSWCSSLTDAGLAHLTPLTALQHLNLNRCEYLKDAGLAH 344
Query: 248 FSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-------------------- 286
+ + L+ LNL ++TD L HLK LT L+ LNL C
Sbjct: 345 LTPLTGLQHLNLNRCKDLTDAGLSHLKPLTALQHLNLSECWKLTDAGLAHLTPLTALQHL 404
Query: 287 ------GIGDEGLVNLTGLCNLKCLELSDTQ-VGSSGLRHLSGLTNLESINLS-FTGISD 338
+ D GL +LT L L+ L+LSD Q +GL HL+ LT L+ +NLS + ++D
Sbjct: 405 DLSRCNSLTDAGLAHLTPLTALQHLDLSDCQNFTDAGLAHLTSLTGLQYLNLSEYKNLTD 464
Query: 339 GSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGAR-ITDSGAAYLRNFK 396
L L L++L+ LNL + R+ TD GLA LT LT L HLDL + +TD G A+L
Sbjct: 465 AGLAHLTPLTALQHLNLCNCRKFTDNGLAHLTPLTALQHLDLSHCKNLTDDGLAHLAPLT 524
Query: 397 NLRSLEICG-GGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
L+ L + LTDAG LT L L++S IT AGL HL PL L+ L L C
Sbjct: 525 GLQRLVLSWCDKLTDAGLAHLTPLTALQYLDLSCCEITDAGLAHLTPLTGLQHLVLVYC 583
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 105/214 (49%), Gaps = 32/214 (14%)
Query: 48 WMDVIASQG-------SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLE 100
W D + G ++L +DLS ++TD+GL HL + LQ L +C Q++D GL
Sbjct: 533 WCDKLTDAGLAHLTPLTALQYLDLSCCEITDAGLAHLTPLTGLQHLVLVYCWQLTDAGLA 592
Query: 101 HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL 160
HL L+ L L N +T GL +L L L+ L
Sbjct: 593 HLTPLTTLQYLYLGSCNRLTD------------------------AGLAHLAPLTALQHL 628
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
+ C +TD+ + L+ LT L+ L ++ C K+TD G+A+LK L L L+L C +T A
Sbjct: 629 ALNDCRKLTDTGLAHLTPLTALQHLTLNRCEKLTDDGLAHLKPLAALQYLDLSYCEITDA 688
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGS 253
L L+ L +L L+L +++DDG E+F + +
Sbjct: 689 GLAHLTHLMALQRLDLYGREITDDGLERFETLAA 722
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD+GL HL + LQ L N C +++D GL HL L+ L L+ R +T G+
Sbjct: 611 LTDAGLAHLAPLTALQHLALNDCRKLTDTGLAHLTPLTALQHLTLNRCEKLTDDGLAHLK 670
Query: 129 GLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L L LDL C GL +L LM L+ L++ + ITD ++ L +L+I
Sbjct: 671 PLAALQYLDLSYCEITDAGLAHLTHLMALQRLDL-YGREITDDGLERFETLAASFNLEI 728
>gi|302853080|ref|XP_002958057.1| hypothetical protein VOLCADRAFT_99233 [Volvox carteri f.
nagariensis]
gi|300256635|gb|EFJ40897.1| hypothetical protein VOLCADRAFT_99233 [Volvox carteri f.
nagariensis]
Length = 581
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 182/530 (34%), Positives = 267/530 (50%), Gaps = 73/530 (13%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCL-GQYPGVNDKWMDVIASQGSSLL 60
LP D+ Q++F+EL+ + + L FR+ L + L G+ ND+ + + S L
Sbjct: 41 LPADLVQRVFDELLAAGRFSLSDLTRFRELDLDTVVLVGRADVRNDRLRSL--EKCSRLR 98
Query: 61 SVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAI 119
S+DL+G V+D G+ L+ LQ L + C+ ++D L H+RGL+ L L R I
Sbjct: 99 SLDLTGCVQVSDVGVASLRRHGGLQRLRLSHCVTLTDAALNHVRGLTGLQELELRECELI 158
Query: 120 TAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGL 179
T +G+ +GL L LDL++C RI GGL +L L L +L + WC + DS++ L L
Sbjct: 159 TGEGLMQLSGLTQLKTLDLDQCRRIKGGLQHLTSLRHLATLRLGWCPLLGDSEVTWLREL 218
Query: 180 TNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC 238
L+ L+++ ++VTD G+++L L LT L+L GC +T A L L +L L+L
Sbjct: 219 GQLRELRLAYTQVTDVGVSHLAALTALTHLDLGGCTRLTDAAAAPLQRLTALQVLSLY-- 276
Query: 239 QLSDDGCEKFSKIGSLKVLNLG----------FNEITDECLVHLKGLTNLESLNLDSCGI 288
GC +F G ++ + + +T L L L+ L L+LDSC +
Sbjct: 277 -----GCGQFGNAGLAMLIAVPLLSLNSLTLSYTAVTTPGLTALSSLSRLTLLSLDSCAV 331
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS---GLTNLESINLSFTG---------- 335
GD L L L L+LS+T VG GL L+ T+L + L++T
Sbjct: 332 GDAVCRVLRRLPRLANLDLSETSVGDGGLDALTVSGPPTSLTHLKLTYTKVNELGMPGKC 391
Query: 336 --ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGA---- 389
I+D L KL+ L L+ L+LD+ +TD L +T L+ LT LDLF RITD+GA
Sbjct: 392 VFITDEGLSKLSLLVGLQQLDLDSGTLTDACLRHVTGLSALTGLDLFSCRITDAGARLLG 451
Query: 390 AYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVS-NSR----------------- 425
NLRSLE CGG LTDAG LT L LN+S N+R
Sbjct: 452 GSGHLGGNLRSLECCGGLLTDAGAVHLARLTSLTCLNLSQNARLGDAGAQSLAASLSDLQ 511
Query: 426 --------ITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLV 467
ITSA LR + L LR L++ + +VT + +L+SR P+L+
Sbjct: 512 ELSLNHTNITSACLRDVAALPWLRYLSVSNTRVTDAAVAKLRSRAHPDLI 561
>gi|46447560|ref|YP_008925.1| hypothetical protein pc1926 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401201|emb|CAF24650.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 761
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 172/491 (35%), Positives = 269/491 (54%), Gaps = 49/491 (9%)
Query: 4 RDISQQIFNELVYSRCLTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSV 62
+ I + F+ VY LT L A +DC L+ L L + D ++ + + ++L +
Sbjct: 194 KKIERLNFSNQVY---LTNAHLLALKDCKNLKALHLEACQALTDDGLEHL-TLLTALQHL 249
Query: 63 DLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
+LS ++TD+GL HL + LQ LD + C + +D GL +L L+ L L R + IT
Sbjct: 250 NLSRCKNLTDAGLAHLTPLTGLQYLDLSHCNKFTDAGLAYLEILTALQHLDLRGCDKITD 309
Query: 122 QGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
G+ L+ L L L +C + GL++LK L L+ LN+ CN +TD+ ++ L+ LT
Sbjct: 310 AGLSHLTPLVALQYLSLSQCWNLTDAGLIHLKPLTALQYLNLSRCNKLTDAGLEHLALLT 369
Query: 181 NLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC------------PVTA--------- 218
+L+ L + SC K+TD+G+A+L L L L+L C P+TA
Sbjct: 370 SLQHLNLSSCKKLTDAGLAHLTPLMALQHLDLSICNKLTDRGLTHLNPLTALQYLNLSQC 429
Query: 219 -----ACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGF-NEITDECLVH 271
A L+ L L +L YLNL++C+ L+D G E + + +L+ L+L + ++TD H
Sbjct: 430 DNITNAGLEHLIPLTALQYLNLSQCEKLTDAGLEHLTPLTALQQLDLSWCYKLTDAGFAH 489
Query: 272 LKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESI 329
L LT L+ L+L C + D GL +LT L L+ L+LS+ ++ GL HL+ L L+ +
Sbjct: 490 LTPLTGLQYLDLSHCNKLTDAGLAHLTPLTALQYLDLSNCIKLTDDGLAHLTPLMALQHL 549
Query: 330 NLSF-TGISDGSLRKLAGLSSLKSLNLDARQ-ITDTGLAALTSLTGLTHLDL-FGARITD 386
NLS ++D L+ L++L+ L+L Q +TD LA LT LT L LDL + +TD
Sbjct: 550 NLSSCYKLTDAGFAHLSPLTALQRLDLSYCQNLTDAELAHLTPLTALQRLDLRYCENLTD 609
Query: 387 SGAAYLRNFKNLRSLEICG-GGLTDAG------LTGLVSLNVSN-SRITSAGLRHLKPLK 438
+G +L+ +L+ L + G G LTDAG L+GL L++S+ ++T AGL HLK L
Sbjct: 610 AGLVHLKLLTDLQYLNLRGCGYLTDAGLAHLTTLSGLQHLDLSSCEKLTDAGLVHLKLLT 669
Query: 439 NLRSLTLESCK 449
+L+ L L C+
Sbjct: 670 DLQYLNLSRCE 680
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 146/399 (36%), Positives = 222/399 (55%), Gaps = 18/399 (4%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
++TD+GLIHLK + LQ L+ + C +++D GLEHL L++L L+ +T G+
Sbjct: 331 NLTDAGLIHLKPLTALQYLNLSRCNKLTDAGLEHLALLTSLQHLNLSSCKKLTDAGLAHL 390
Query: 128 AGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
L+ L LDL C ++ GL +L L L+ LN+ C+ IT++ ++ L LT L+ L
Sbjct: 391 TPLMALQHLDLSICNKLTDRGLTHLNPLTALQYLNLSQCDNITNAGLEHLIPLTALQYLN 450
Query: 187 IS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDD 243
+S C K+TD+G+ +L L L L+L C +T A L+ L L YL+L+ C +L+D
Sbjct: 451 LSQCEKLTDAGLEHLTPLTALQQLDLSWCYKLTDAGFAHLTPLTGLQYLDLSHCNKLTDA 510
Query: 244 GCEKFSKIGSLKVLNLG-FNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCN 301
G + + +L+ L+L ++TD+ L HL L L+ LNL SC + D G +L+ L
Sbjct: 511 GLAHLTPLTALQYLDLSNCIKLTDDGLAHLTPLMALQHLNLSSCYKLTDAGFAHLSPLTA 570
Query: 302 LKCLELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-R 358
L+ L+LS Q + + L HL+ LT L+ ++L + ++D L L L+ L+ LNL
Sbjct: 571 LQRLDLSYCQNLTDAELAHLTPLTALQRLDLRYCENLTDAGLVHLKLLTDLQYLNLRGCG 630
Query: 359 QITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGL 416
+TD GLA LT+L+GL HLDL ++TD+G +L+ +L+ L + LTD GL L
Sbjct: 631 YLTDAGLAHLTTLSGLQHLDLSSCEKLTDAGLVHLKLLTDLQYLNLSRCENLTDEGLALL 690
Query: 417 VSLNVSNS-------RITSAGLRHLKPLKNLRSLTLESC 448
L +T AGL HL PL L+ L L C
Sbjct: 691 TPLTALQHLKLRYCINLTDAGLAHLTPLTGLQRLDLSQC 729
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 158/465 (33%), Positives = 241/465 (51%), Gaps = 69/465 (14%)
Query: 57 SSLLSVDLSGSD-VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
++L +DL G D +TD+GL HL LQ L + C ++D GL HL+ L+ L L+ R
Sbjct: 294 TALQHLDLRGCDKITDAGLSHLTPLVALQYLSLSQCWNLTDAGLIHLKPLTALQYLNLSR 353
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N +T G++ A L +L L+L C ++ GL +L LM L+ L++ CN +TD +
Sbjct: 354 CNKLTDAGLEHLALLTSLQHLNLSSCKKLTDAGLAHLTPLMALQHLDLSICNKLTDRGLT 413
Query: 175 PLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFY 232
L+ LT L+ L +S C +T++G+ +L L L LNL C +T A L+ L+ L +L
Sbjct: 414 HLNPLTALQYLNLSQCDNITNAGLEHLIPLTALQYLNLSQCEKLTDAGLEHLTPLTALQQ 473
Query: 233 LNLNRC-QLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIG 289
L+L+ C +L+D G + + L+ L+L N++TD L HL LT L+ L+L +C +
Sbjct: 474 LDLSWCYKLTDAGFAHLTPLTGLQYLDLSHCNKLTDAGLAHLTPLTALQYLDLSNCIKLT 533
Query: 290 DEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGL 347
D+GL +LT L L+ L LS ++ +G HLS LT L+ ++LS+ ++D L L L
Sbjct: 534 DDGLAHLTPLMALQHLNLSSCYKLTDAGFAHLSPLTALQRLDLSYCQNLTDAELAHLTPL 593
Query: 348 SSLKSLNL-------DAR-------------------QITDTGLAALTSLTGLTHLDLFG 381
++L+ L+L DA +TD GLA LT+L+GL HLDL
Sbjct: 594 TALQRLDLRYCENLTDAGLVHLKLLTDLQYLNLRGCGYLTDAGLAHLTTLSGLQHLDLSS 653
Query: 382 -ARITDSGAAYLRNFKNLRSLEI--CGG------------------------GLTDAGL- 413
++TD+G +L+ +L+ L + C LTDAGL
Sbjct: 654 CEKLTDAGLVHLKLLTDLQYLNLSRCENLTDEGLALLTPLTALQHLKLRYCINLTDAGLA 713
Query: 414 -----TGLVSLNVSN-SRITSAGLRHLKPLKNLRSLTLESCKVTA 452
TGL L++S +T AGL HLK L L+ L L ++
Sbjct: 714 HLTPLTGLQRLDLSQCWNLTDAGLIHLKLLTALQHLNLSDTNISP 758
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 137/360 (38%), Positives = 201/360 (55%), Gaps = 30/360 (8%)
Query: 111 LSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCIT 169
L+F +T + A NL L LE C + GL +L L L+ LN+ C +T
Sbjct: 199 LNFSNQVYLTNAHLLALKDCKNLKALHLEACQALTDDGLEHLTLLTALQHLNLSRCKNLT 258
Query: 170 DSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSAL 227
D+ + L+ LT L+ L +S C+K TD+G+AYL+ L L L+L GC +T A L L+ L
Sbjct: 259 DAGLAHLTPLTGLQYLDLSHCNKFTDAGLAYLEILTALQHLDLRGCDKITDAGLSHLTPL 318
Query: 228 GSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDS 285
+L YL+L++C L+D G + +L+ LNL N++TD L HL LT+L+ LNL S
Sbjct: 319 VALQYLSLSQCWNLTDAGLIHLKPLTALQYLNLSRCNKLTDAGLEHLALLTSLQHLNLSS 378
Query: 286 CG-IGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLR 342
C + D GL +LT L L+ L+LS ++ GL HL+ LT L+ +NLS I++ L
Sbjct: 379 CKKLTDAGLAHLTPLMALQHLDLSICNKLTDRGLTHLNPLTALQYLNLSQCDNITNAGLE 438
Query: 343 KLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRS 400
L L++L+ LNL ++TD GL LT LT L LDL + ++TD+G A+L
Sbjct: 439 HLIPLTALQYLNLSQCEKLTDAGLEHLTPLTALQQLDLSWCYKLTDAGFAHL-------- 490
Query: 401 LEICGGGLTDAGLTGLVSLNVSN-SRITSAGLRHLKPLKNLRSLTLESC-KVTANDIKRL 458
LTGL L++S+ +++T AGL HL PL L+ L L +C K+T + + L
Sbjct: 491 ----------TPLTGLQYLDLSHCNKLTDAGLAHLTPLTALQYLDLSNCIKLTDDGLAHL 540
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/339 (35%), Positives = 171/339 (50%), Gaps = 34/339 (10%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD-VTDSGLIHLKDCSNLQSLDFNF 90
ALQ L L Q + + ++ + ++L ++LS + +TD+GL HL + LQ LD ++
Sbjct: 420 ALQYLNLSQCDNITNAGLEHLIPL-TALQYLNLSQCEKLTDAGLEHLTPLTALQQLDLSW 478
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLV 149
C +++D G HL L+ L L N +T G+ L L LDL C ++ GL
Sbjct: 479 CYKLTDAGFAHLTPLTGLQYLDLSHCNKLTDAGLAHLTPLTALQYLDLSNCIKLTDDGLA 538
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTL 208
+L LM L+ LN+ C +TD+ LS LT L+ L +S C +TD+ +A+L L L
Sbjct: 539 HLTPLMALQHLNLSSCYKLTDAGFAHLSPLTALQRLDLSYCQNLTDAELAHLTPLTALQR 598
Query: 209 LNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNE-IT 265
L+L C +T A L L L L YLNL C L+D G + + L+ L+L E +T
Sbjct: 599 LDLRYCENLTDAGLVHLKLLTDLQYLNLRGCGYLTDAGLAHLTTLSGLQHLDLSSCEKLT 658
Query: 266 DECLVHLKGLTNLESLNLDSC--------------------------GIGDEGLVNLTGL 299
D LVHLK LT+L+ LNL C + D GL +LT L
Sbjct: 659 DAGLVHLKLLTDLQYLNLSRCENLTDEGLALLTPLTALQHLKLRYCINLTDAGLAHLTPL 718
Query: 300 CNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFTGIS 337
L+ L+LS + +GL HL LT L+ +NLS T IS
Sbjct: 719 TGLQRLDLSQCWNLTDAGLIHLKLLTALQHLNLSDTNIS 757
>gi|46446831|ref|YP_008196.1| hypothetical protein pc1197 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400472|emb|CAF23921.1| hypothetical protein pc1197 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 666
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 150/396 (37%), Positives = 216/396 (54%), Gaps = 16/396 (4%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD+GL HL LQ LD + C +++D GL HL L+ L L +T G+
Sbjct: 247 ITDAGLAHLTTLKALQHLDLSQCSKLTDDGLAHLTPLTALQHLGLNYCENLTDAGLAHLT 306
Query: 129 GLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L L LDL C + GL +L LM L+ L++ WC +TD+ + L+ LT L+ L +
Sbjct: 307 LLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLDLSWCLKLTDAGLAHLTSLTGLQHLDL 366
Query: 188 S-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQLSDDGC 245
S C +TD+G+A+L L L LNL C +T A L L+ L +L +LNL+R L+ G
Sbjct: 367 SNCKNLTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLTPLTALQHLNLSRYNLTYAGL 426
Query: 246 EKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLK 303
+ + L+ L+L G ++ D L HL+ L L+ LNL C + D GL +L+ L L+
Sbjct: 427 AHLTSLTGLQHLDLSGSRKLIDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLSPLKALQ 486
Query: 304 CLELSDTQ-VGSSGLRHLSGLTNLESINLS-FTGISDGSLRKLAGLSSLKSLNLDA-RQI 360
L LS Q + +GL HL L L+ ++LS ++D L L L +L+ LNL ++
Sbjct: 487 TLGLSWCQNLTGAGLAHLKPLVALQYLDLSNCNNLTDAGLAHLRPLVALQHLNLTGCWKL 546
Query: 361 TDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLT---- 414
TD GLA LTSL L HL+L + ++TD+G A+L+ L+ L++ LTD GLT
Sbjct: 547 TDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLKPLVALQHLDLSNCNNLTDEGLTHLRP 606
Query: 415 --GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
L LN+S +T GL HL PL L+ L L SC
Sbjct: 607 LVALQHLNLSRYNLTDDGLAHLTPLTTLQYLDLSSC 642
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 222/397 (55%), Gaps = 17/397 (4%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD+ L+ LK+C NL+ L F C I+D GL HL L++L L+ + IT G+
Sbjct: 197 LTDAHLLALKNCKNLKILHFKNCRVITDAGLAHLTPLTSLQRLNLSKLWCITDAGLAHLT 256
Query: 129 GLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L L LDL +C+++ GL +L L L+ L + +C +TD+ + L+ LT L+ L +
Sbjct: 257 TLKALQHLDLSQCSKLTDDGLAHLTPLTALQHLGLNYCENLTDAGLAHLTLLTGLQHLDL 316
Query: 188 S-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQ-LSDDG 244
S C +TD+G+A+L L L L+L C +T A L L++L L +L+L+ C+ L+D G
Sbjct: 317 SNCKNLTDAGLAHLTSLMALQHLDLSWCLKLTDAGLAHLTSLTGLQHLDLSNCKNLTDAG 376
Query: 245 CEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
+ + +L+ LNL + ++TD L HL LT L+ LNL + GL +LT L L+
Sbjct: 377 LAHLTSLMALQHLNLSWCLKLTDAGLAHLTPLTALQHLNLSRYNLTYAGLAHLTSLTGLQ 436
Query: 304 CLELSDT-QVGSSGLRHLSGLTNLESINLS-FTGISDGSLRKLAGLSSLKSLNLDARQ-I 360
L+LS + ++ +GL HL L L+ +NL+ ++D L L+ L +L++L L Q +
Sbjct: 437 HLDLSGSRKLIDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLSPLKALQTLGLSWCQNL 496
Query: 361 TDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGLVS 418
T GLA L L L +LDL +TD+G A+LR L+ L + G LTDAGL L S
Sbjct: 497 TGAGLAHLKPLVALQYLDLSNCNNLTDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLTS 556
Query: 419 LNVSNS-------RITSAGLRHLKPLKNLRSLTLESC 448
L ++T AGL HLKPL L+ L L +C
Sbjct: 557 LMALQHLNLSWCLKLTDAGLAHLKPLVALQHLDLSNC 593
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 129/380 (33%), Positives = 185/380 (48%), Gaps = 72/380 (18%)
Query: 76 HLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
HL D +++LDF I ++D L L+ NL L F+ IT
Sbjct: 181 HLSD--EIEALDFFNNIYLTDAHLLALKNCKNLKILHFKNCRVITD-------------- 224
Query: 136 LDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTD 194
GL +L L L+ LN+ CITD+ + L+ L L+ L +S CSK+TD
Sbjct: 225 ----------AGLAHLTPLTSLQRLNLSKLWCITDAGLAHLTTLKALQHLDLSQCSKLTD 274
Query: 195 SGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGS 253
G+A+L L L L L C +T A L L+ L L +L+L+ C+
Sbjct: 275 DGLAHLTPLTALQHLGLNYCENLTDAGLAHLTLLTGLQHLDLSNCK-------------- 320
Query: 254 LKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQ- 311
+TD L HL L L+ L+L C + D GL +LT L L+ L+LS+ +
Sbjct: 321 ---------NLTDAGLAHLTSLMALQHLDLSWCLKLTDAGLAHLTSLTGLQHLDLSNCKN 371
Query: 312 VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
+ +GL HL+ L L+ +NLS+ ++D L L L++L+ LNL +T GLA LTS
Sbjct: 372 LTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLTPLTALQHLNLSRYNLTYAGLAHLTS 431
Query: 371 LTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSA 429
LTGL HLDL G+R + D+G A+LR L+ L + G ++T A
Sbjct: 432 LTGLQHLDLSGSRKLIDAGLAHLRPLVALQHLNLTGCW-----------------KLTDA 474
Query: 430 GLRHLKPLKNLRSLTLESCK 449
GL HL PLK L++L L C+
Sbjct: 475 GLAHLSPLKALQTLGLSWCQ 494
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 169/324 (52%), Gaps = 8/324 (2%)
Query: 58 SLLSVDLSGS-DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+L +DLS +TD+GL HL + LQ LD + C ++D GL HL L L L+
Sbjct: 335 ALQHLDLSWCLKLTDAGLAHLTSLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLNLSWC 394
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+T G+ L L L+L R + GL +L L L+ L++ + D+ + L
Sbjct: 395 LKLTDAGLAHLTPLTALQHLNLSRYNLTYAGLAHLTSLTGLQHLDLSGSRKLIDAGLAHL 454
Query: 177 SGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLN 234
L L+ L ++ C K+TD+G+A+L L+ L L L C +T A L L L +L YL+
Sbjct: 455 RPLVALQHLNLTGCWKLTDAGLAHLSPLKALQTLGLSWCQNLTGAGLAHLKPLVALQYLD 514
Query: 235 LNRC-QLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDE 291
L+ C L+D G + +L+ LNL G ++TD L HL L L+ LNL C + D
Sbjct: 515 LSNCNNLTDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLTSLMALQHLNLSWCLKLTDA 574
Query: 292 GLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
GL +L L L+ L+LS+ + GL HL L L+ +NLS ++D L L L++L
Sbjct: 575 GLAHLKPLVALQHLDLSNCNNLTDEGLTHLRPLVALQHLNLSRYNLTDDGLAHLTPLTTL 634
Query: 351 KSLNLDA-RQITDTGLAALTSLTG 373
+ L+L + +TD GLA ++
Sbjct: 635 QYLDLSSCYNLTDAGLAHFKTVAA 658
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 127/240 (52%), Gaps = 14/240 (5%)
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCG-IGDEG 292
N L+D +LK+L+ ITD L HL LT+L+ LNL I D G
Sbjct: 192 FNNIYLTDAHLLALKNCKNLKILHFKNCRVITDAGLAHLTPLTSLQRLNLSKLWCITDAG 251
Query: 293 LVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSL 350
L +LT L L+ L+LS +++ GL HL+ LT L+ + L++ ++D L L L+ L
Sbjct: 252 LAHLTTLKALQHLDLSQCSKLTDDGLAHLTPLTALQHLGLNYCENLTDAGLAHLTLLTGL 311
Query: 351 KSLNL-DARQITDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG-GG 407
+ L+L + + +TD GLA LTSL L HLDL + ++TD+G A+L + L+ L++
Sbjct: 312 QHLDLSNCKNLTDAGLAHLTSLMALQHLDLSWCLKLTDAGLAHLTSLTGLQHLDLSNCKN 371
Query: 408 LTDAGLTGLVSLNVSNS-------RITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
LTDAGL L SL ++T AGL HL PL L+ L L +T + L S
Sbjct: 372 LTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLTPLTALQHLNLSRYNLTYAGLAHLTS 431
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD+GL HL LQ L+ ++C++++D GL HL+ L L L N +T +G+
Sbjct: 546 LTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLKPLVALQHLDLSNCNNLTDEGLTHLR 605
Query: 129 GLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
L+ L L+L R GL +L L L+ L++ C +TD +GL + K++ S
Sbjct: 606 PLVALQHLNLSRYNLTDDGLAHLTPLTTLQYLDLSSCYNLTD------AGLAHFKTVAAS 659
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 377 LDLFG-ARITDSGAAYLRNFKNLRSLEICG-GGLTDAGL------TGLVSLNVSNSR-IT 427
LD F +TD+ L+N KNL+ L +TDAGL T L LN+S IT
Sbjct: 189 LDFFNNIYLTDAHLLALKNCKNLKILHFKNCRVITDAGLAHLTPLTSLQRLNLSKLWCIT 248
Query: 428 SAGLRHLKPLKNLRSLTLESCKVTAND 454
AGL HL LK L+ L L C +D
Sbjct: 249 DAGLAHLTTLKALQHLDLSQCSKLTDD 275
>gi|428173313|gb|EKX42216.1| hypothetical protein GUITHDRAFT_74106 [Guillardia theta CCMP2712]
Length = 527
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 171/481 (35%), Positives = 255/481 (53%), Gaps = 40/481 (8%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAF-RDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
+P ++ Q +F+ L YSR L + L R C D L YP + D W++V+ +L
Sbjct: 42 IPNEMVQALFDSLAYSRRLEKSHLPLLSRIC---DASLFAYPLIADDWLEVLGESFHALT 98
Query: 61 SVDLSGS-DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAI 119
+D+S VTD G+ L+ +L+S+ C+++ D LE + LS+L+ LS +
Sbjct: 99 RLDMSNCIHVTDEGISRLRSLQSLRSIKLENCLRLGDATLEVIGELSSLSHLSVSACTRM 158
Query: 120 TAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
+ G+ + L+ + L+LER TR+ G+ +L+ L L LN+ W N DS + L
Sbjct: 159 ASSGVSCLSQLVRMTDLNLERLTRLDSEGIESLEKLTNLRILNLGWTNADDDS-FESLRS 217
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA-ACLDSLSALGSLFYLNLNR 237
L LK L + T+ G+ L L +L L + C V A + L LS+LG L L+L++
Sbjct: 218 LPRLKRLNVCACPFTEDGLQALCSLTQLESLRMCSCKVGATSALVELSSLGKLKLLDLSQ 277
Query: 238 CQ-LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
C+ + D E + LK+L L +TD L +L L +L++LNLD C + + GL +
Sbjct: 278 CEHVGDQTLEALRGLSDLKILLLAHTRVTDIGLGYLSSLWDLKTLNLDCCHVTNGGLQTI 337
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
L NL+ L+LSD V SSGL L+GLT L+S+NL TG+SD + + GL++L LNLD
Sbjct: 338 ANLTNLENLDLSDNVVTSSGLALLTGLTTLKSLNLFSTGVSDAGVIHVTGLTNLVRLNLD 397
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG- 415
+R ITD+GLA ++ LT L LDLFGA++T G Y+ +L SLE+CGGGLTD +
Sbjct: 398 SRLITDSGLACISGLTNLQELDLFGAKVTHHGTIYIGLLTSLTSLELCGGGLTDEAMREL 457
Query: 416 ------------------------------LVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
L SLN++ + +S G RHL +L SL L
Sbjct: 458 KRLTRMRNLNVSQNESLSNGSFIPMSRMSLLTSLNIAGTNFSSDGARHLTIFTDLTSLCL 517
Query: 446 E 446
Sbjct: 518 R 518
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 28/231 (12%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
L+ + VTD GL +L +L++L+ + C +++GGL+ + L+NL +L +N +T+ G
Sbjct: 300 LAHTRVTDIGLGYLSSLWDLKTLNLD-CCHVTNGGLQTIANLTNLENLDLS-DNVVTSSG 357
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+ GL L L+L G++++ GL L LN+ ITDS + +SGLTNL+
Sbjct: 358 LALLTGLTTLKSLNLFSTGVSDAGVIHVTGLTNLVRLNLD-SRLITDSGLACISGLTNLQ 416
Query: 184 SLQISCSKVTDSGIAY------------------------LKGLQKLTLLNL-EGCPVTA 218
L + +KVT G Y LK L ++ LN+ + ++
Sbjct: 417 ELDLFGAKVTHHGTIYIGLLTSLTSLELCGGGLTDEAMRELKRLTRMRNLNVSQNESLSN 476
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
+S + L LN+ S DG + L L L F+ ++ CL
Sbjct: 477 GSFIPMSRMSLLTSLNIAGTNFSSDGARHLTIFTDLTSLCLRFDCLSRTCL 527
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 26/189 (13%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++DLS + VT SGL L + L+SL+ F +SD G+ H+ GL+NL L+ +
Sbjct: 341 TNLENLDLSDNVVTSSGLALLTGLTTLKSLNL-FSTGVSDAGVIHVTGLTNLVRLNLD-S 398
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLV------------------------NLK 152
IT G+ +GL NL +LDL H G + LK
Sbjct: 399 RLITDSGLACISGLTNLQELDLFGAKVTHHGTIYIGLLTSLTSLELCGGGLTDEAMRELK 458
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
L ++ +LN+ +++ P+S ++ L SL I+ + + G +L LT L L
Sbjct: 459 RLTRMRNLNVSQNESLSNGSFIPMSRMSLLTSLNIAGTNFSSDGARHLTIFTDLTSLCLR 518
Query: 213 GCPVTAACL 221
++ CL
Sbjct: 519 FDCLSRTCL 527
>gi|406836026|ref|ZP_11095620.1| leucine-rich repeat-containing protein [Schlesneria paludicola DSM
18645]
Length = 586
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 158/469 (33%), Positives = 241/469 (51%), Gaps = 29/469 (6%)
Query: 6 ISQQIFNELVYSRCLTEVSLE--AFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVD 63
IS ++L+ R LT + L A D AL+ L + + +L +++
Sbjct: 135 ISDAGLDKLLALRNLTAIDLSETAITDSALKPLSVLE-----------------NLSTIN 177
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
LS + + SGL L NL++L + I++ L + L NLT+L N I+A G
Sbjct: 178 LSTTKIDGSGLADLSGLKNLKTLVLSHS-PITNEALAGVAALRNLTTLELW-NTPISADG 235
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+K+ L +L KL+L + GL L L L++LN+ +TD+ + LS + NL
Sbjct: 236 LKSLGTLTDLTKLNLGFTSLDDTGLAELATLTNLKALNLMQTG-VTDTGLSSLSQIKNLT 294
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
+L ++ +++TD+G+ + + L L+LEG +T L +L LG L L + + ++D
Sbjct: 295 NLNLNDTQITDAGMVAIARHKDLNELHLEGTRLTDVGLRALKTLGELDVLQIGKTAVTDA 354
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
G E+ + LK+L LG +++DE L L GL +L+SL L GI D G L L L
Sbjct: 355 GVEELAGFKHLKILRLGSTKVSDEGLKSLLGLEHLQSLGLGGTGITDVGAKQLASLTTLT 414
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
L+L T V G+R L GL+NLE ++L T ISD + L LK L L QI+D
Sbjct: 415 GLDLDATAVTDEGVRELGGLSNLEYLSLISTKISDDGVSGLGAFKKLKMLFLHNNQISDE 474
Query: 364 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG---LTGLVSLN 420
GL L L+ LT L L ++TD G L+N K+L+ L +C +TDAG LTGL LN
Sbjct: 475 GLKGLNDLSQLTTLYLSMTQVTDVGMKELKNLKHLKDLVLCDTQITDAGLKELTGLSELN 534
Query: 421 V---SNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
V N +T A L HL KNL L ++ + + + ++ +PN+
Sbjct: 535 VLVIRNVAVTDACLEHLTSFKNLTHLCIDVHRFSEAGLNAFKTS-MPNV 582
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 211/420 (50%), Gaps = 34/420 (8%)
Query: 45 NDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRG 104
ND+++ +I+ G L S+DLS + +TD GL L+ + L SL+ + ISD GL L
Sbjct: 64 NDRYVHLISPLGR-LESLDLSNTQITDLGLKELRKLNALTSLNLRYT-AISDVGLSELSE 121
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW 164
+S L +L+ I+ G+ L NL +DL
Sbjct: 122 MSKLDTLNLSATQ-ISDAGLDKLLALRNLTAIDLSET----------------------- 157
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
ITDS +KPLS L NL ++ +S +K+ SG+A L GL+ L L L P+T L +
Sbjct: 158 --AITDSALKPLSVLENLSTINLSTTKIDGSGLADLSGLKNLKTLVLSHSPITNEALAGV 215
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
+AL +L L L +S DG + + L LNLGF + D L L LTNL++LNL
Sbjct: 216 AALRNLTTLELWNTPISADGLKSLGTLTDLTKLNLGFTSLDDTGLAELATLTNLKALNLM 275
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
G+ D GL +L+ + NL L L+DTQ+ +G+ ++ +L ++L T ++D LR L
Sbjct: 276 QTGVTDTGLSSLSQIKNLTNLNLNDTQITDAGMVAIARHKDLNELHLEGTRLTDVGLRAL 335
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
L L L + +TD G+ L L L L +++D G L ++L+SL +
Sbjct: 336 KTLGELDVLQIGKTAVTDAGVEELAGFKHLKILRLGSTKVSDEGLKSLLGLEHLQSLGLG 395
Query: 405 GGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
G G+TD G LT L L++ + +T G+R L L NL L+L S K++ + + L
Sbjct: 396 GTGITDVGAKQLASLTTLTGLDLDATAVTDEGVRELGGLSNLEYLSLISTKISDDGVSGL 455
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 151/285 (52%), Gaps = 18/285 (6%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
+S L L+SL +S +++TD G+ L+ L LT LNL ++ L LS + L LNL
Sbjct: 71 ISPLGRLESLDLSNTQITDLGLKELRKLNALTSLNLRYTAISDVGLSELSEMSKLDTLNL 130
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
+ Q+SD G +K + +L ++L ITD L L L NL ++NL + I GL +
Sbjct: 131 SATQISDAGLDKLLALRNLTAIDLSETAITDSALKPLSVLENLSTINLSTTKIDGSGLAD 190
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L+GL NLK L LS + + + L ++ L NL ++ L T IS L+ L L+ L LNL
Sbjct: 191 LSGLKNLKTLVLSHSPITNEALAGVAALRNLTTLELWNTPISADGLKSLGTLTDLTKLNL 250
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG 415
+ DTGLA L +LT L L+L +TD+G + L KNL
Sbjct: 251 GFTSLDDTGLAELATLTNLKALNLMQTGVTDTGLSSLSQIKNL----------------- 293
Query: 416 LVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
+LN+++++IT AG+ + K+L L LE ++T ++ L++
Sbjct: 294 -TNLNLNDTQITDAGMVAIARHKDLNELHLEGTRLTDVGLRALKT 337
>gi|46447144|ref|YP_008509.1| hypothetical protein pc1510 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400785|emb|CAF24234.1| hypothetical protein pc1510 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 670
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 155/397 (39%), Positives = 213/397 (53%), Gaps = 18/397 (4%)
Query: 65 SGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+ +TD+ L+ LK C NL+ L C ++D GL HL L L L + + +T G+
Sbjct: 275 ENAHLTDAHLLALKTCKNLKVLYLKKCCNLTDAGLPHLTPLVALQYLDLSKCHNLTDAGL 334
Query: 125 KAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
L L L L C + GL +LK L+ L+ LN+ CN TD+ + L+ L LK
Sbjct: 335 THLTFLDALNYLGLGECYNLTDTGLAHLKSLINLQHLNLNNCN-FTDAGLAHLTPLVTLK 393
Query: 184 SLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQLS 241
L +S C +TD+G+A+L L L LNL C +T L LS L +L +LNLN C+L
Sbjct: 394 YLNLSQCYNLTDAGLAHLTPLVNLQQLNLSDCTNLTDTGLAYLSPLVTLQHLNLNVCKLI 453
Query: 242 DDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGL 299
D G + + +L+ LNL + +TD L HL L L+ L+LD C + D GL +LT L
Sbjct: 454 DAGLAHLTPLVNLQQLNLSYCTNLTDAGLAHLSTLVTLQHLDLDGCYKLTDIGLAHLTPL 513
Query: 300 CNLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSFTG-ISDGSLRKLAGLSSLKSLNL-D 356
LK L LS + +GL HL+ L L+ ++LS+ G + D L L L +LK L+L +
Sbjct: 514 VTLKYLNLSCCHNLTGAGLAHLTPLVALKHLDLSWNGDLEDAGLAHLTPLVALKYLDLSE 573
Query: 357 ARQITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLT 414
+TD GLA L SL L HLDL G ++TD+G A+L L+ L++ G LTDAGL
Sbjct: 574 CYHLTDAGLAHLRSLVALKHLDLRGCYQLTDAGIAHLTPLVALKYLDLKGCPNLTDAGLA 633
Query: 415 GLVS------LNVSN-SRITSAGLRHLKPLKNLRSLT 444
L S L + N RIT AGL HL LR T
Sbjct: 634 HLTSLIALQDLELPNCQRITDAGLAHLASSMTLRIWT 670
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 197/379 (51%), Gaps = 23/379 (6%)
Query: 110 SLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCI 168
+L+F N +T + A NL L L++C + GL +L L+ L+ L++ C+ +
Sbjct: 270 ALNFSENAHLTDAHLLALKTCKNLKVLYLKKCCNLTDAGLPHLTPLVALQYLDLSKCHNL 329
Query: 169 TDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
TD+ + L+ L L L + C +TD+G+A+LK L L LNL C T A L L+ L
Sbjct: 330 TDAGLTHLTFLDALNYLGLGECYNLTDTGLAHLKSLINLQHLNLNNCNFTDAGLAHLTPL 389
Query: 228 GSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLG-FNEITDECLVHLKGLTNLESLNLDS 285
+L YLNL++C L+D G + + +L+ LNL +TD L +L L L+ LNL+
Sbjct: 390 VTLKYLNLSQCYNLTDAGLAHLTPLVNLQQLNLSDCTNLTDTGLAYLSPLVTLQHLNLNV 449
Query: 286 CGIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLS-FTGISDGSLRK 343
C + D GL +LT L NL+ L LS T + +GL HLS L L+ ++L ++D L
Sbjct: 450 CKLIDAGLAHLTPLVNLQQLNLSYCTNLTDAGLAHLSTLVTLQHLDLDGCYKLTDIGLAH 509
Query: 344 LAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSL 401
L L +LK LNL +T GLA LT L L HLDL + + D+G A+L L+ L
Sbjct: 510 LTPLVTLKYLNLSCCHNLTGAGLAHLTPLVALKHLDLSWNGDLEDAGLAHLTPLVALKYL 569
Query: 402 EICG-GGLTDAGLTGLVSLNVSNS-------RITSAGLRHLKPLKNLRSLTLESCK---- 449
++ LTDAGL L SL ++T AG+ HL PL L+ L L+ C
Sbjct: 570 DLSECYHLTDAGLAHLRSLVALKHLDLRGCYQLTDAGIAHLTPLVALKYLDLKGCPNLTD 629
Query: 450 ---VTANDIKRLQSRDLPN 465
+ LQ +LPN
Sbjct: 630 AGLAHLTSLIALQDLELPN 648
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 160/301 (53%), Gaps = 7/301 (2%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
+L ++L+ + TD+GL HL L+ L+ + C ++D GL HL L NL L+
Sbjct: 367 NLQHLNLNNCNFTDAGLAHLTPLVTLKYLNLSQCYNLTDAGLAHLTPLVNLQQLNLSDCT 426
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS 177
+T G+ + L+ L L+L C I GL +L L+ L+ LN+ +C +TD+ + LS
Sbjct: 427 NLTDTGLAYLSPLVTLQHLNLNVCKLIDAGLAHLTPLVNLQQLNLSYCTNLTDAGLAHLS 486
Query: 178 GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNL 235
L L+ L + C K+TD G+A+L L L LNL C +T A L L+ L +L +L+L
Sbjct: 487 TLVTLQHLDLDGCYKLTDIGLAHLTPLVTLKYLNLSCCHNLTGAGLAHLTPLVALKHLDL 546
Query: 236 N-RCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEG 292
+ L D G + + +LK L+L +TD L HL+ L L+ L+L C + D G
Sbjct: 547 SWNGDLEDAGLAHLTPLVALKYLDLSECYHLTDAGLAHLRSLVALKHLDLRGCYQLTDAG 606
Query: 293 LVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAGLSSL 350
+ +LT L LK L+L + +GL HL+ L L+ + L + I+D L LA +L
Sbjct: 607 IAHLTPLVALKYLDLKGCPNLTDAGLAHLTSLIALQDLELPNCQRITDAGLAHLASSMTL 666
Query: 351 K 351
+
Sbjct: 667 R 667
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 111/217 (51%), Gaps = 14/217 (6%)
Query: 246 EKFSKIGSLKVLNLGFNE---ITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCN 301
EK S +V L F+E +TD L+ LK NL+ L L C + D GL +LT L
Sbjct: 258 EKILNYFSNEVEALNFSENAHLTDAHLLALKTCKNLKVLYLKKCCNLTDAGLPHLTPLVA 317
Query: 302 LKCLELSDTQ-VGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNLDARQ 359
L+ L+LS + +GL HL+ L L + L ++D L L L +L+ LNL+
Sbjct: 318 LQYLDLSKCHNLTDAGLTHLTFLDALNYLGLGECYNLTDTGLAHLKSLINLQHLNLNNCN 377
Query: 360 ITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICG-GGLTDAGL---- 413
TD GLA LT L L +L+L +TD+G A+L NL+ L + LTD GL
Sbjct: 378 FTDAGLAHLTPLVTLKYLNLSQCYNLTDAGLAHLTPLVNLQQLNLSDCTNLTDTGLAYLS 437
Query: 414 --TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
L LN++ ++ AGL HL PL NL+ L L C
Sbjct: 438 PLVTLQHLNLNVCKLIDAGLAHLTPLVNLQQLNLSYC 474
>gi|46447653|ref|YP_009018.1| hypothetical protein pc2019 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401294|emb|CAF24743.1| hypothetical protein pc2019 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 959
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 151/405 (37%), Positives = 219/405 (54%), Gaps = 18/405 (4%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
++TD+GL HL LQ+LD +FC +++D GL HL+ L L L+ + +T G+
Sbjct: 479 NITDAGLAHLTPLVALQNLDLSFCYKLTDDGLAHLKPLVALKQLNLWACSNLTGAGLAHL 538
Query: 128 AGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
LI L LDL C + GL +LK L+ L+ L++ C +TD+ + L+ L L+ L
Sbjct: 539 TPLIALKHLDLGFCYGLTDDGLAHLKPLVALQYLSLSGCKKLTDAGLAHLTSLITLQQLN 598
Query: 187 I-SCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDD 243
I SC+ +TD G+A+LK L L LNL C +T L L++L +L +L+L+ C L+D
Sbjct: 599 ISSCANLTDDGLAHLKPLIALQQLNLSSCKKLTGVGLAHLTSLVNLTHLSLSECGNLTDA 658
Query: 244 GCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCN 301
G + + +L+ L+L F +TD L HL L L+ L L +CG + D GL +LT L
Sbjct: 659 GLAHLAPLVALQQLDLNFCYNLTDAGLAHLITLVALQQLYLSACGNLTDAGLAHLTPLVA 718
Query: 302 LKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL-DAR 358
L+ L LS ++ GL HL+ L L ++LS ++D L L L +L LNL D
Sbjct: 719 LQQLNLSGCKKLTGVGLAHLTSLATLTHLSLSACANLTDDGLAHLTTLVALTYLNLSDCN 778
Query: 359 QITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGL 416
T GL L L L +L L G ++TD+G AYL+ L+ L + G +TDAGLT L
Sbjct: 779 NFTGAGLTHLKPLVALQYLSLSGCKKLTDAGLAYLKPLVALQQLNLRGCKKITDAGLTHL 838
Query: 417 VSLNVSN-------SRITSAGLRHLKPLKNLRSLTLESCKVTAND 454
+SL ++T GL HLKPL L L+L C +D
Sbjct: 839 MSLVALQCLSLSGCKKLTDDGLAHLKPLVALTHLSLGECVKLTDD 883
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 219/401 (54%), Gaps = 19/401 (4%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
++TD+GL +L+ LQ L+ N C +++D GL HL+ L LT L+ + + +T G+
Sbjct: 403 NITDNGLAYLRPLIALQGLNLNGCKKLTDAGLVHLKSLVTLTYLNLSQCDDLTDAGLAHL 462
Query: 128 AGLINLVKLDLERCTR--IHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
L+ L LDL C GL +L L+ L++L++ +C +TD + L L LK L
Sbjct: 463 TPLVALQHLDLSFCCYNITDAGLAHLTPLVALQNLDLSFCYKLTDDGLAHLKPLVALKQL 522
Query: 186 QI-SCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QLSD 242
+ +CS +T +G+A+L L L L+L C +T L L L +L YL+L+ C +L+D
Sbjct: 523 NLWACSNLTGAGLAHLTPLIALKHLDLGFCYGLTDDGLAHLKPLVALQYLSLSGCKKLTD 582
Query: 243 DGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLC 300
G + + +L+ LN+ +TD+ L HLK L L+ LNL SC + GL +LT L
Sbjct: 583 AGLAHLTSLITLQQLNISSCANLTDDGLAHLKPLIALQQLNLSSCKKLTGVGLAHLTSLV 642
Query: 301 NLKCLELSDT-QVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA- 357
NL L LS+ + +GL HL+ L L+ ++L+F ++D L L L +L+ L L A
Sbjct: 643 NLTHLSLSECGNLTDAGLAHLAPLVALQQLDLNFCYNLTDAGLAHLITLVALQQLYLSAC 702
Query: 358 RQITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICG-GGLTDAG--- 412
+TD GLA LT L L L+L G ++T G A+L + L L + LTD G
Sbjct: 703 GNLTDAGLAHLTPLVALQQLNLSGCKKLTGVGLAHLTSLATLTHLSLSACANLTDDGLAH 762
Query: 413 LTGLVSLNVSN----SRITSAGLRHLKPLKNLRSLTLESCK 449
LT LV+L N + T AGL HLKPL L+ L+L CK
Sbjct: 763 LTTLVALTYLNLSDCNNFTGAGLTHLKPLVALQYLSLSGCK 803
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 216/403 (53%), Gaps = 21/403 (5%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
+ +TD+ L+ LKDC L+ L C ++D GL +LR L L L+ T G+
Sbjct: 327 ASLTDAHLLALKDCKKLKVLYLQECNNLTDVGLAYLRPLITLQGLNLNSCKKFTDAGLAH 386
Query: 127 FAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
LI+L +L L +C I GL L+ L+ L+ LN+ C +TD+ + L L L L
Sbjct: 387 LDSLIDLTQLGLAKCHNITDNGLAYLRPLIALQGLNLNGCKKLTDAGLVHLKSLVTLTYL 446
Query: 186 QIS-CSKVTDSGIAYLKGLQKLTLLNLEGC--PVTAACLDSLSALGSLFYLNLNRC-QLS 241
+S C +TD+G+A+L L L L+L C +T A L L+ L +L L+L+ C +L+
Sbjct: 447 NLSQCDDLTDAGLAHLTPLVALQHLDLSFCCYNITDAGLAHLTPLVALQNLDLSFCYKLT 506
Query: 242 DDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGL 299
DDG + +LK LNL + +T L HL L L+ L+L C G+ D+GL +L L
Sbjct: 507 DDGLAHLKPLVALKQLNLWACSNLTGAGLAHLTPLIALKHLDLGFCYGLTDDGLAHLKPL 566
Query: 300 CNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA 357
L+ L LS ++ +GL HL+ L L+ +N+S ++D L L L +L+ LNL +
Sbjct: 567 VALQYLSLSGCKKLTDAGLAHLTSLITLQQLNISSCANLTDDGLAHLKPLIALQQLNLSS 626
Query: 358 -RQITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEI--CGGGLTDAGL 413
+++T GLA LTSL LTHL L +TD+G A+L L+ L++ C LTDAGL
Sbjct: 627 CKKLTGVGLAHLTSLVNLTHLSLSECGNLTDAGLAHLAPLVALQQLDLNFC-YNLTDAGL 685
Query: 414 TGLVSLNVSNS-------RITSAGLRHLKPLKNLRSLTLESCK 449
L++L +T AGL HL PL L+ L L CK
Sbjct: 686 AHLITLVALQQLYLSACGNLTDAGLAHLTPLVALQQLNLSGCK 728
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 173/324 (53%), Gaps = 9/324 (2%)
Query: 65 SGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
S +++TD GL HLK LQ L+ + C +++ GL HL L NLT LS +T G+
Sbjct: 601 SCANLTDDGLAHLKPLIALQQLNLSSCKKLTGVGLAHLTSLVNLTHLSLSECGNLTDAGL 660
Query: 125 KAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
A L+ L +LDL C + GL +L L+ L+ L + C +TD+ + L+ L L+
Sbjct: 661 AHLAPLVALQQLDLNFCYNLTDAGLAHLITLVALQQLYLSACGNLTDAGLAHLTPLVALQ 720
Query: 184 SLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QL 240
L +S C K+T G+A+L L LT L+L C +T L L+ L +L YLNL+ C
Sbjct: 721 QLNLSGCKKLTGVGLAHLTSLATLTHLSLSACANLTDDGLAHLTTLVALTYLNLSDCNNF 780
Query: 241 SDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTG 298
+ G + +L+ L+L G ++TD L +LK L L+ LNL C I D GL +L
Sbjct: 781 TGAGLTHLKPLVALQYLSLSGCKKLTDAGLAYLKPLVALQQLNLRGCKKITDAGLTHLMS 840
Query: 299 LCNLKCLELSD-TQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNL- 355
L L+CL LS ++ GL HL L L ++L ++D L L L +L LNL
Sbjct: 841 LVALQCLSLSGCKKLTDDGLAHLKPLVALTHLSLGECVKLTDDGLAHLTPLLALTHLNLS 900
Query: 356 DARQITDTGLAALTSLTGLTHLDL 379
D +T GLA LT L LT++DL
Sbjct: 901 DCNNLTVAGLAHLTPLENLTYVDL 924
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Query: 336 ISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGAR-ITDSGAAYLR 393
++D L L L +L+ LNL++ ++ TD GLA L SL LT L L ITD+G AYLR
Sbjct: 354 LTDVGLAYLRPLITLQGLNLNSCKKFTDAGLAHLDSLIDLTQLGLAKCHNITDNGLAYLR 413
Query: 394 NFKNLRSLEICG-GGLTDAGLTGLVSL------NVSN-SRITSAGLRHLKPLKNLRSLTL 445
L+ L + G LTDAGL L SL N+S +T AGL HL PL L+ L L
Sbjct: 414 PLIALQGLNLNGCKKLTDAGLVHLKSLVTLTYLNLSQCDDLTDAGLAHLTPLVALQHLDL 473
Query: 446 ESCKVTAND 454
C D
Sbjct: 474 SFCCYNITD 482
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD+GL HL LQ L + C +++D GL HL+ L LT LS +T G+
Sbjct: 830 ITDAGLTHLMSLVALQCLSLSGCKKLTDDGLAHLKPLVALTHLSLGECVKLTDDGLAHLT 889
Query: 129 GLINLVKLDLERCTRIH-GGLVNLKGLMKLESLNIKWCNCITD 170
L+ L L+L C + GL +L L L +++ CN TD
Sbjct: 890 PLLALTHLNLSDCNNLTVAGLAHLTPLENLTYVDLNNCNNFTD 932
>gi|46446659|ref|YP_008024.1| hypothetical protein pc1025 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400300|emb|CAF23749.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 695
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 219/398 (55%), Gaps = 17/398 (4%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD GL HL + LQ L+ + ++D GL HL L+ L L+ R N +T G+
Sbjct: 263 LTDDGLAHLTPLTALQYLNLSASYNLTDAGLVHLAPLTALQKLNLGRYNQLTDAGLAHLK 322
Query: 129 GLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L L +LDL C + GL +L+ L L+ L++++C +TD + L LT L+ L +
Sbjct: 323 PLTALQRLDLSFCEDLTDDGLAHLRPLTALQRLDLRYCEKLTDDGLVHLRPLTALQRLNL 382
Query: 188 SCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDGC 245
S T +G+++L L L LNL C +T A L L L L +LNL+ C +L+D G
Sbjct: 383 SNCWHTGAGLSHLSPLTGLQHLNLYECINLTDAGLVHLKLLTGLQHLNLSYCDELTDAGL 442
Query: 246 EKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLK 303
+ L+ LNL N +TD LVHLK LT L+ LNL C + D GLV+L L L+
Sbjct: 443 VHLKLLTGLQHLNLSNCNNLTDAGLVHLKFLTGLQHLNLSYCDELTDAGLVHLKLLTGLQ 502
Query: 304 CLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL-DARQI 360
L LS+ + +GL HL+ LT L+ ++LS+ + ++D L L L++L+ LNL + R +
Sbjct: 503 HLNLSNCNNLTDAGLAHLTPLTGLQHLDLSYCSKLTDDGLAHLKPLTALQCLNLSNCRNL 562
Query: 361 TDTGLAALTSLTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEICG-GGLTDAG------ 412
TD GL L LTGL HL+L + +TD G +L LR LE+ G LTDAG
Sbjct: 563 TDAGLVHLKLLTGLQHLNLSDYKNLTDDGLIHLMPLMALRHLELLGCENLTDAGLVHLTP 622
Query: 413 LTGLVSLNVSN-SRITSAGLRHLKPLKNLRSLTLESCK 449
LT L LN+S+ +T AGL HL L L+ L L C+
Sbjct: 623 LTALQHLNLSHCDDLTDAGLAHLTSLTGLQHLELLGCE 660
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 144/368 (39%), Positives = 204/368 (55%), Gaps = 12/368 (3%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
+ +TD+GL HLK + LQ LD +FC ++D GL HLR L+ L L R +T G+
Sbjct: 311 NQLTDAGLAHLKPLTALQRLDLSFCEDLTDDGLAHLRPLTALQRLDLRYCEKLTDDGLVH 370
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
L L +L+L C GL +L L L+ LN+ C +TD+ + L LT L+ L
Sbjct: 371 LRPLTALQRLNLSNCWHTGAGLSHLSPLTGLQHLNLYECINLTDAGLVHLKLLTGLQHLN 430
Query: 187 IS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDD 243
+S C ++TD+G+ +LK L L LNL C +T A L L L L +LNL+ C +L+D
Sbjct: 431 LSYCDELTDAGLVHLKLLTGLQHLNLSNCNNLTDAGLVHLKFLTGLQHLNLSYCDELTDA 490
Query: 244 GCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCN 301
G + L+ LNL N +TD L HL LT L+ L+L C + D+GL +L L
Sbjct: 491 GLVHLKLLTGLQHLNLSNCNNLTDAGLAHLTPLTGLQHLDLSYCSKLTDDGLAHLKPLTA 550
Query: 302 LKCLELSDTQ-VGSSGLRHLSGLTNLESINLS-FTGISDGSLRKLAGLSSLKSLN-LDAR 358
L+CL LS+ + + +GL HL LT L+ +NLS + ++D L L L +L+ L L
Sbjct: 551 LQCLNLSNCRNLTDAGLVHLKLLTGLQHLNLSDYKNLTDDGLIHLMPLMALRHLELLGCE 610
Query: 359 QITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGL 416
+TD GL LT LT L HL+L +TD+G A+L + L+ LE+ G LTDAGL
Sbjct: 611 NLTDAGLVHLTPLTALQHLNLSHCDDLTDAGLAHLTSLTGLQHLELLGCENLTDAGLARF 670
Query: 417 VSLNVSNS 424
+ V+NS
Sbjct: 671 KT--VANS 676
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 165/461 (35%), Positives = 242/461 (52%), Gaps = 28/461 (6%)
Query: 17 SRCLTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGS-DVTDSGL 74
+R LT+ L ++C L+ L L + + D + + ++L ++LS S ++TD+GL
Sbjct: 235 NRYLTDAHLLILKNCKNLKVLHLEKCRALTDDGLAHLTPL-TALQYLNLSASYNLTDAGL 293
Query: 75 IHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLV 134
+HL + LQ L+ Q++D GL HL+ L+ L L +T G+ L L
Sbjct: 294 VHLAPLTALQKLNLGRYNQLTDAGLAHLKPLTALQRLDLSFCEDLTDDGLAHLRPLTALQ 353
Query: 135 KLDLERCTRI-HGGLVNLKGLMKLESLNIK--WCNCITDSDMKPLSGLTNLKSLQISCSK 191
+LDL C ++ GLV+L+ L L+ LN+ W S + PL+GL +L + C
Sbjct: 354 RLDLRYCEKLTDDGLVHLRPLTALQRLNLSNCWHTGAGLSHLSPLTGLQHLNLYE--CIN 411
Query: 192 VTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFS 249
+TD+G+ +LK L L LNL C +T A L L L L +LNL+ C L+D G
Sbjct: 412 LTDAGLVHLKLLTGLQHLNLSYCDELTDAGLVHLKLLTGLQHLNLSNCNNLTDAGLVHLK 471
Query: 250 KIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLEL 307
+ L+ LNL + +E+TD LVHLK LT L+ LNL +C + D GL +LT L L+ L+L
Sbjct: 472 FLTGLQHLNLSYCDELTDAGLVHLKLLTGLQHLNLSNCNNLTDAGLAHLTPLTGLQHLDL 531
Query: 308 SD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL-DARQITDTG 364
S +++ GL HL LT L+ +NLS ++D L L L+ L+ LNL D + +TD G
Sbjct: 532 SYCSKLTDDGLAHLKPLTALQCLNLSNCRNLTDAGLVHLKLLTGLQHLNLSDYKNLTDDG 591
Query: 365 LAALTSLTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGLVSLNVS 422
L L L L HL+L G +TD+G +L L+ L + LTDAGL L SL
Sbjct: 592 LIHLMPLMALRHLELLGCENLTDAGLVHLTPLTALQHLNLSHCDDLTDAGLAHLTSL--- 648
Query: 423 NSRITSAGLRHLKPL--KNLRSLTLESCKVTANDIKRLQSR 461
GL+HL+ L +NL L K AN + + R
Sbjct: 649 ------TGLQHLELLGCENLTDAGLARFKTVANSLYLIIKR 683
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 171/315 (54%), Gaps = 16/315 (5%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGC 214
K+E LN +TD+ + L NLK L + C +TD G+A+L L L LNL
Sbjct: 226 KIEGLNFSNNRYLTDAHLLILKNCKNLKVLHLEKCRALTDDGLAHLTPLTALQYLNLSAS 285
Query: 215 P-VTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNE-ITDECLVH 271
+T A L L+ L +L LNL R QL+D G + +L+ L+L F E +TD+ L H
Sbjct: 286 YNLTDAGLVHLAPLTALQKLNLGRYNQLTDAGLAHLKPLTALQRLDLSFCEDLTDDGLAH 345
Query: 272 LKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
L+ LT L+ L+L C + D+GLV+L L L+ L LS+ +GL HLS LT L+ +N
Sbjct: 346 LRPLTALQRLDLRYCEKLTDDGLVHLRPLTALQRLNLSNCWHTGAGLSHLSPLTGLQHLN 405
Query: 331 L-SFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGA-RITDS 387
L ++D L L L+ L+ LNL ++TD GL L LTGL HL+L +TD+
Sbjct: 406 LYECINLTDAGLVHLKLLTGLQHLNLSYCDELTDAGLVHLKLLTGLQHLNLSNCNNLTDA 465
Query: 388 GAAYLRNFKNLRSLEICG-GGLTDAG------LTGLVSLNVSN-SRITSAGLRHLKPLKN 439
G +L+ L+ L + LTDAG LTGL LN+SN + +T AGL HL PL
Sbjct: 466 GLVHLKFLTGLQHLNLSYCDELTDAGLVHLKLLTGLQHLNLSNCNNLTDAGLAHLTPLTG 525
Query: 440 LRSLTLESCKVTAND 454
L+ L L C +D
Sbjct: 526 LQHLDLSYCSKLTDD 540
>gi|46446522|ref|YP_007887.1| hypothetical protein pc0888 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400163|emb|CAF23612.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 653
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 153/399 (38%), Positives = 225/399 (56%), Gaps = 19/399 (4%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD+ L+ LKDC NL+ L C I+D GL HL L+ L L +T G+
Sbjct: 236 LTDAHLLALKDCKNLKVLHLEKCQVITDDGLAHLTPLTALQHLELSDCRKLTDAGLAHLT 295
Query: 129 GLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNC-ITDSDMKPLSGLTNLKSLQ 186
L L L+L C ++ GL +L L L+ LN+ C +TD+ + L+ LT L+ L
Sbjct: 296 PLTALQHLNLSFCDKLTDAGLAHLTPLTALQHLNLSRCYYKLTDAGLAHLTPLTALQHLN 355
Query: 187 IS-CSKVTDSGIAYLKGLQKLTLLNL-EGCPVTAACLDSLSALGSLFYLNLNRC-QLSDD 243
+S C K+TD+G+ +LK L L L+L E +T A L L+ L +L +L+L+ C +L+D
Sbjct: 356 LSFCDKLTDAGLVHLKLLTGLQHLDLREFWELTGAGLAHLTTLTALQHLDLSGCDKLTDV 415
Query: 244 GCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCN 301
G + + +L+ L+L +T+ LVHLK LT L+ LNL C + D GL +LT L
Sbjct: 416 GLAHLTPLTTLQHLDLKRCRNLTNAGLVHLKLLTGLQHLNLSECYHLTDAGLAHLTPLTA 475
Query: 302 LKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL-DAR 358
L+ L+LS +++ GL HL+ LT L+ ++LS + ++D L L L++L+ L L R
Sbjct: 476 LQHLDLSQCSKLTDDGLAHLTPLTALQHLDLSQCSKLTDDGLAHLTPLTALQHLVLARCR 535
Query: 359 QITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICG-GGLTDAG---L 413
+TD GLA LT L L HL+L G ++T +G A+LR L+ L++ GLTDAG L
Sbjct: 536 NLTDAGLAHLTPLETLQHLNLSGGYKLTGAGLAHLRPLVALQHLDLSYCNGLTDAGLAHL 595
Query: 414 TGLVSLNVSN----SRITSAGLRHLKPLKNLRSLTLESC 448
T LV+L + +T AGL HL+PL L+ L L C
Sbjct: 596 TPLVALQHLDLSYCDGLTDAGLTHLRPLVALQHLDLSYC 634
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 181/334 (54%), Gaps = 33/334 (9%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD+GL HL + LQ L+ +FC +++D GL HL+ L+ L L R +T G+
Sbjct: 337 LTDAGLAHLTPLTALQHLNLSFCDKLTDAGLVHLKLLTGLQHLDLREFWELTGAGLAHLT 396
Query: 129 GLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L L LDL C ++ GL +L L L+ L++K C +T++ + L LT L+ L +
Sbjct: 397 TLTALQHLDLSGCDKLTDVGLAHLTPLTTLQHLDLKRCRNLTNAGLVHLKLLTGLQHLNL 456
Query: 188 S-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC-QLSDDGC 245
S C +TD+G+A+L P+TA L +L+L++C +L+DDG
Sbjct: 457 SECYHLTDAGLAHLT-------------PLTA-----------LQHLDLSQCSKLTDDGL 492
Query: 246 EKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLK 303
+ + +L+ L+L +++TD+ L HL LT L+ L L C + D GL +LT L L+
Sbjct: 493 AHLTPLTALQHLDLSQCSKLTDDGLAHLTPLTALQHLVLARCRNLTDAGLAHLTPLETLQ 552
Query: 304 CLELS-DTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQI 360
L LS ++ +GL HL L L+ ++LS+ G++D L L L +L+ L+L +
Sbjct: 553 HLNLSGGYKLTGAGLAHLRPLVALQHLDLSYCNGLTDAGLAHLTPLVALQHLDLSYCDGL 612
Query: 361 TDTGLAALTSLTGLTHLDL-FGARITDSGAAYLR 393
TD GL L L L HLDL + +TD+G A+ +
Sbjct: 613 TDAGLTHLRPLVALQHLDLSYCDGLTDAGLAHFK 646
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 157/291 (53%), Gaps = 33/291 (11%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
++T +GL HL + LQ LD + C +++D GL HL L+ L
Sbjct: 386 ELTGAGLAHLTTLTALQHLDLSGCDKLTDVGLAHLTPLTTLQ------------------ 427
Query: 128 AGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
LDL+RC + + GLV+LK L L+ LN+ C +TD+ + L+ LT L+ L
Sbjct: 428 -------HLDLKRCRNLTNAGLVHLKLLTGLQHLNLSECYHLTDAGLAHLTPLTALQHLD 480
Query: 187 IS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQ-LSDD 243
+S CSK+TD G+A+L L L L+L C +T L L+ L +L +L L RC+ L+D
Sbjct: 481 LSQCSKLTDDGLAHLTPLTALQHLDLSQCSKLTDDGLAHLTPLTALQHLVLARCRNLTDA 540
Query: 244 GCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCN 301
G + + +L+ LNL G ++T L HL+ L L+ L+L C G+ D GL +LT L
Sbjct: 541 GLAHLTPLETLQHLNLSGGYKLTGAGLAHLRPLVALQHLDLSYCNGLTDAGLAHLTPLVA 600
Query: 302 LKCLELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSL 350
L+ L+LS + +GL HL L L+ ++LS+ G++D L L+++
Sbjct: 601 LQHLDLSYCDGLTDAGLTHLRPLVALQHLDLSYCDGLTDAGLAHFKFLAAI 651
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 144/256 (56%), Gaps = 18/256 (7%)
Query: 216 VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLG-FNEITDECLVHLK 273
+T A L +L +L L+L +CQ ++DDG + + +L+ L L ++TD L HL
Sbjct: 236 LTDAHLLALKDCKNLKVLHLEKCQVITDDGLAHLTPLTALQHLELSDCRKLTDAGLAHLT 295
Query: 274 GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD--TQVGSSGLRHLSGLTNLESIN 330
LT L+ LNL C + D GL +LT L L+ L LS ++ +GL HL+ LT L+ +N
Sbjct: 296 PLTALQHLNLSFCDKLTDAGLAHLTPLTALQHLNLSRCYYKLTDAGLAHLTPLTALQHLN 355
Query: 331 LSF-TGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGA-RITDS 387
LSF ++D L L L+ L+ L+L + ++T GLA LT+LT L HLDL G ++TD
Sbjct: 356 LSFCDKLTDAGLVHLKLLTGLQHLDLREFWELTGAGLAHLTTLTALQHLDLSGCDKLTDV 415
Query: 388 GAAYLRNFKNLRSLEI--CGGGLTDAGL------TGLVSLNVSN-SRITSAGLRHLKPLK 438
G A+L L+ L++ C LT+AGL TGL LN+S +T AGL HL PL
Sbjct: 416 GLAHLTPLTTLQHLDLKRCRN-LTNAGLVHLKLLTGLQHLNLSECYHLTDAGLAHLTPLT 474
Query: 439 NLRSLTLESCKVTAND 454
L+ L L C +D
Sbjct: 475 ALQHLDLSQCSKLTDD 490
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNF 90
ALQ L L Q + D + + + ++L +DLS S +TD GL HL + LQ L
Sbjct: 475 ALQHLDLSQCSKLTDDGLAHL-TPLTALQHLDLSQCSKLTDDGLAHLTPLTALQHLVLAR 533
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLV 149
C ++D GL HL L L L+ +T G+ L+ L LDL C + GL
Sbjct: 534 CRNLTDAGLAHLTPLETLQHLNLSGGYKLTGAGLAHLRPLVALQHLDLSYCNGLTDAGLA 593
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGL 203
+L L+ L+ L++ +C+ +TD+ + L L L+ L +S C +TD+G+A+ K L
Sbjct: 594 HLTPLVALQHLDLSYCDGLTDAGLTHLRPLVALQHLDLSYCDGLTDAGLAHFKFL 648
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 58 SLLSVDLSGSD-VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+L +DLS + +TD+GL HL LQ LD ++C ++D GL HLR L L L
Sbjct: 575 ALQHLDLSYCNGLTDAGLAHLTPLVALQHLDLSYCDGLTDAGLTHLRPLVALQHLDLSYC 634
Query: 117 NAITAQGMKAFAGLINLVK 135
+ +T G+ F L ++
Sbjct: 635 DGLTDAGLAHFKFLAAIIH 653
>gi|46447549|ref|YP_008914.1| hypothetical protein pc1915 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401190|emb|CAF24639.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 683
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 157/438 (35%), Positives = 230/438 (52%), Gaps = 44/438 (10%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
+ +TD+ L+ LK+C NL+ L C ++D GL HL L+ L L+ +T G+
Sbjct: 235 AHLTDAHLLVLKNCKNLKVLYLQGCRNLTDAGLAHLTPLTGLQHLNLSWCRNLTDAGLAH 294
Query: 127 FAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
A L L LDL C + GL +L L L+ L+++ C ITD+ + L+ LT L++L
Sbjct: 295 LAPLTALQYLDLSHCRNLTDTGLAHLTPLTALQHLDLRVCKNITDAGLAHLAPLTALQNL 354
Query: 186 QIS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSD 242
+S C +TD+G+AYL L L LNL C +T A L L L +L L L++C L+D
Sbjct: 355 DLSDCGHLTDAGLAYLTPLTALQHLNLYFCFNLTDAGLVHLRPLTALQTLGLSQCWNLTD 414
Query: 243 DGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLC 300
G + + +L+ LNL ++TD L HL LT L+ LNL C + D+GL +L L
Sbjct: 415 TGLAHLTPLTALQHLNLSRCYKLTDAGLAHLTPLTALQHLNLSYCENLTDDGLAHLAPLT 474
Query: 301 NLKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA- 357
L+ L LS ++ +GL HL+ LT L+ +NLS ++D L +L L++L+ L+L
Sbjct: 475 ALQYLRLSQCWKLTDAGLAHLTPLTALQHLNLSRCYKLTDAGLARLTPLTALQHLDLKYC 534
Query: 358 RQITDTGLAALTSLTGLTHLDLFGAR--------------------------ITDSGAAY 391
+TD GLA LT L+GL HL L + +TD G A+
Sbjct: 535 INLTDAGLARLTPLSGLQHLALTNCKYLTDAGLAHLTLLTALQYLALANCKNLTDVGLAH 594
Query: 392 LRNFKNLRSLEICG-GGLTDAG------LTGLVSLNVSNSR-ITSAGLRHLKPLKNLRSL 443
L L+ L++ LTDAG LTGL LN+S R +T AGL HL PL L+ L
Sbjct: 595 LTPLTALQHLDLSECRHLTDAGLAHLTPLTGLQHLNLSWCRNLTDAGLAHLSPLSVLQHL 654
Query: 444 TLESC-KVTANDIKRLQS 460
L C ++T + + R ++
Sbjct: 655 ALSQCSRLTDDGLDRFKT 672
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 57 SSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
++L +DLS +TD+GL HL + LQ L+ ++C ++D GL HL LS L L+ +
Sbjct: 599 TALQHLDLSECRHLTDAGLAHLTPLTGLQHLNLSWCRNLTDAGLAHLSPLSVLQHLALSQ 658
Query: 116 NNAITAQGMKAFAGLINLVKLDLER 140
+ +T G+ F L + L++ R
Sbjct: 659 CSRLTDDGLDRFKTLATSLNLEIVR 683
>gi|46446910|ref|YP_008275.1| hypothetical protein pc1276 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400551|emb|CAF24000.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 667
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 150/419 (35%), Positives = 231/419 (55%), Gaps = 21/419 (5%)
Query: 66 GSDVTDSGLIHLKDCSN-LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
S VT+ I LK SN ++ L+F+ I ++D L L+ NL +L + + +T G+
Sbjct: 243 ASHVTEFEKI-LKHFSNEIERLNFSKNIFLTDAHLLALKNCKNLKALHLQECDKLTDAGL 301
Query: 125 KAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
A L+ L L+L C + GL +L LM L+ LN+ C+ ITD+ + L+ L L+
Sbjct: 302 AHLASLMALQHLNLNGCWELTDAGLAHLASLMALQHLNLAKCHKITDAGLAHLTSLVALQ 361
Query: 184 SLQISCSK-VTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQ-L 240
L +SC + +TD+G+ +L+ L LT LNL C +T A L L++L +L +L+L+ C+ L
Sbjct: 362 HLDLSCCRNLTDAGLTHLRPLVALTHLNLAKCHKITDAGLAHLTSLVALQHLDLSYCEKL 421
Query: 241 SDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTG 298
+D G + + +L+ L+L + + T+ L HL L L+ LNL+SC D GL +LT
Sbjct: 422 TDAGLAHLTPLVALQHLDLSYSHHFTNAGLAHLTSLVALQHLNLNSCYKFTDAGLAHLTS 481
Query: 299 LCNLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSFT-GISDGSLRKLAGLSSLKSLNLD 356
L L+ L+LS + + +GL HL+ L L+ ++LS++ ++ L L L +L+ L+L
Sbjct: 482 LVALQHLDLSCCRNLTDAGLAHLAPLVALQHLDLSYSHHFTNAGLAHLTSLVALQHLDLS 541
Query: 357 -ARQITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICG-GGLTDAGL 413
R +TD GLA LTSL L HLDL ++TD+G +L L+ L++ LTDAGL
Sbjct: 542 CCRNLTDAGLAHLTSLVALQHLDLSSCKKLTDAGLEHLTPLVALQHLDLSSCKKLTDAGL 601
Query: 414 TGLVSLNV-------SNSRITSAGLRHLKPLKNLRSLTLESC-KVTANDIKRLQSRDLP 464
L L S ++T AGL HL PL L+ L L C K+T + +S P
Sbjct: 602 AHLAPLVALQHLDLSSCKKLTDAGLAHLAPLVALQHLNLNWCDKLTDAGVAHFKSSVAP 660
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 131/387 (33%), Positives = 217/387 (56%), Gaps = 13/387 (3%)
Query: 20 LTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHL 77
LT+ L A ++C L+ L L + + D + +AS + L ++L+G ++TD+GL HL
Sbjct: 271 LTDAHLLALKNCKNLKALHLQECDKLTDAGLAHLASLMA-LQHLNLNGCWELTDAGLAHL 329
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLD 137
LQ L+ C +I+D GL HL L L L +T G+ L+ L L+
Sbjct: 330 ASLMALQHLNLAKCHKITDAGLAHLTSLVALQHLDLSCCRNLTDAGLTHLRPLVALTHLN 389
Query: 138 LERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCS-KVTDS 195
L +C +I GL +L L+ L+ L++ +C +TD+ + L+ L L+ L +S S T++
Sbjct: 390 LAKCHKITDAGLAHLTSLVALQHLDLSYCEKLTDAGLAHLTPLVALQHLDLSYSHHFTNA 449
Query: 196 GIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGS 253
G+A+L L L LNL C T A L L++L +L +L+L+ C+ L+D G + + +
Sbjct: 450 GLAHLTSLVALQHLNLNSCYKFTDAGLAHLTSLVALQHLDLSCCRNLTDAGLAHLAPLVA 509
Query: 254 LKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-T 310
L+ L+L + + T+ L HL L L+ L+L C + D GL +LT L L+ L+LS
Sbjct: 510 LQHLDLSYSHHFTNAGLAHLTSLVALQHLDLSCCRNLTDAGLAHLTSLVALQHLDLSSCK 569
Query: 311 QVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAAL 368
++ +GL HL+ L L+ ++LS ++D L LA L +L+ L+L + +++TD GLA L
Sbjct: 570 KLTDAGLEHLTPLVALQHLDLSSCKKLTDAGLAHLAPLVALQHLDLSSCKKLTDAGLAHL 629
Query: 369 TSLTGLTHLDL-FGARITDSGAAYLRN 394
L L HL+L + ++TD+G A+ ++
Sbjct: 630 APLVALQHLNLNWCDKLTDAGVAHFKS 656
>gi|149174278|ref|ZP_01852905.1| serine/threonine protein kinase [Planctomyces maris DSM 8797]
gi|148846823|gb|EDL61159.1| serine/threonine protein kinase [Planctomyces maris DSM 8797]
Length = 1815
Score = 179 bits (454), Expect = 3e-42, Method: Composition-based stats.
Identities = 147/453 (32%), Positives = 222/453 (49%), Gaps = 43/453 (9%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S SL ++ + + +++SG+ LKD L+ L F QI GL HL+ L NL L
Sbjct: 1328 SNMPSLTTLYVGSTAISNSGVEQLKDMKQLEKLSFT-NTQIDGVGLGHLKDLKNLKILGL 1386
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
+ +I+ ++ GL L+ L L C GL LK L L+ L++ ITD +
Sbjct: 1387 E-STSISDVDLQHLHGLKILIVLGLSNCKIADSGLAYLKDLKNLKVLSLD-STPITDEGL 1444
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYL-KGLQKLTLL-NLEGCPVTAA------------ 219
K LSGL L++L++ +KVT GIA L K L ++ + E P+ +
Sbjct: 1445 KHLSGLKMLQTLELQKTKVTPQGIASLQKALPNCKIVSDFETKPIMTSDSPMTDREIAEW 1504
Query: 220 CLDSLSALGSLFYLN-----------------LNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
+ +G F LN L D ++ +K+ +LK L L
Sbjct: 1505 VIGMGGGIGIGFKLNYKIEELPTEPVIFNSVSLKNASFEDHDLQRLAKLKTLKYLFLEST 1564
Query: 263 EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG 322
I+D L +L+ + NLE + LD I DEGL++L GL NL+ L LS T++ GL HL
Sbjct: 1565 SISDTGLQYLRQMQNLEEIFLDYTNITDEGLLHLRGLQNLRVLRLSKTKITGEGLGHLKD 1624
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLTGLTHL-DLF 380
L L +I+++ I++ ++ + L L SLN+ Q+ DTGL + LT L L
Sbjct: 1625 LPRLHTIDVNRAAITNSGMKAMGDLKQLTSLNISFNSQVDDTGLGYIEGLTKLEKLFAHL 1684
Query: 381 GARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLV------SLNVSNSRITSAGLRHL 434
+ITD G +L+ K L SL + G+T GL L L+++N +IT +GL HL
Sbjct: 1685 VPKITDEGLKHLQGMKQLESLTLSSTGITTTGLEQLTKHESLSKLDLTNCKITDSGLEHL 1744
Query: 435 KPLKNLRSLTLESCKVTANDIKRLQS-RDLPNL 466
+ LKNLR L L+ V+ ++ L S + L NL
Sbjct: 1745 QDLKNLRDLRLDLTPVSDAGLQHLYSLKKLENL 1777
Score = 123 bits (308), Expect = 2e-25, Method: Composition-based stats.
Identities = 81/248 (32%), Positives = 135/248 (54%), Gaps = 4/248 (1%)
Query: 150 NLKGLMKLESLNIKW--CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
+L+ L KL++L + I+D+ ++ L + NL+ + + + +TD G+ +L+GLQ L
Sbjct: 1546 DLQRLAKLKTLKYLFLESTSISDTGLQYLRQMQNLEEIFLDYTNITDEGLLHLRGLQNLR 1605
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN-EITD 266
+L L +T L L L L +++NR +++ G + + L LN+ FN ++ D
Sbjct: 1606 VLRLSKTKITGEGLGHLKDLPRLHTIDVNRAAITNSGMKAMGDLKQLTSLNISFNSQVDD 1665
Query: 267 ECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
L +++GLT LE L I DEGL +L G+ L+ L LS T + ++GL L+ +
Sbjct: 1666 TGLGYIEGLTKLEKLFAHLVPKITDEGLKHLQGMKQLESLTLSSTGITTTGLEQLTKHES 1725
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L ++L+ I+D L L L +L+ L LD ++D GL L SL L +LDL ++T
Sbjct: 1726 LSKLDLTNCKITDSGLEHLQDLKNLRDLRLDLTPVSDAGLQHLYSLKKLENLDLRETKVT 1785
Query: 386 DSGAAYLR 393
G A L+
Sbjct: 1786 SQGIADLQ 1793
Score = 122 bits (306), Expect = 4e-25, Method: Composition-based stats.
Identities = 85/256 (33%), Positives = 135/256 (52%), Gaps = 3/256 (1%)
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
+N + ++ A L L L LE + GL L+ + LE + + + N ITD +
Sbjct: 1538 KNASFEDHDLQRLAKLKTLKYLFLESTSISDTGLQYLRQMQNLEEIFLDYTN-ITDEGLL 1596
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L GL NL+ L++S +K+T G+ +LK L +L +++ +T + + ++ L L LN
Sbjct: 1597 HLRGLQNLRVLRLSKTKITGEGLGHLKDLPRLHTIDVNRAAITNSGMKAMGDLKQLTSLN 1656
Query: 235 LN-RCQLSDDGCEKFSKIGSL-KVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
++ Q+ D G + L K+ +ITDE L HL+G+ LESL L S GI G
Sbjct: 1657 ISFNSQVDDTGLGYIEGLTKLEKLFAHLVPKITDEGLKHLQGMKQLESLTLSSTGITTTG 1716
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
L LT +L L+L++ ++ SGL HL L NL + L T +SD L+ L L L++
Sbjct: 1717 LEQLTKHESLSKLDLTNCKITDSGLEHLQDLKNLRDLRLDLTPVSDAGLQHLYSLKKLEN 1776
Query: 353 LNLDARQITDTGLAAL 368
L+L ++T G+A L
Sbjct: 1777 LDLRETKVTSQGIADL 1792
Score = 105 bits (263), Expect = 4e-20, Method: Composition-based stats.
Identities = 101/368 (27%), Positives = 156/368 (42%), Gaps = 41/368 (11%)
Query: 136 LDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDS 195
LDL+ + L L GL L LN++ ++D+ ++ L + L + + +++TD
Sbjct: 1265 LDLKGTSVKDDDLKRLAGLKTLPKLNLE-NTLVSDTGLQYLKDIP-LNYISLIGTQITDK 1322
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 255
G YL + LT L + ++ + ++ L + L L+ Q+ G + +LK
Sbjct: 1323 GFGYLSNMPSLTTLYVGSTAISNSGVEQLKDMKQLEKLSFTNTQIDGVGLGHLKDLKNLK 1382
Query: 256 VLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSS 315
+L L I+D L HL GL L L L +C I D GL L L NLK L L T +
Sbjct: 1383 ILGLESTSISDVDLQHLHGLKILIVLGLSNCKIADSGLAYLKDLKNLKVLSLDSTPITDE 1442
Query: 316 GLRHLSGLTNLESINLSFTGISD---GSLR------KLAGLSSLKSLNLDARQITDTGLA 366
GL+HLSGL L+++ L T ++ SL+ K+ K + +TD +A
Sbjct: 1443 GLKHLSGLKMLQTLELQKTKVTPQGIASLQKALPNCKIVSDFETKPIMTSDSPMTDREIA 1502
Query: 367 AL----------------------TSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
T + L A D L K L+ L +
Sbjct: 1503 EWVIGMGGGIGIGFKLNYKIEELPTEPVIFNSVSLKNASFEDHDLQRLAKLKTLKYLFLE 1562
Query: 405 GGGLTDAGLTGLVSLN------VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
++D GL L + + + IT GL HL+ L+NLR L L K+T + L
Sbjct: 1563 STSISDTGLQYLRQMQNLEEIFLDYTNITDEGLLHLRGLQNLRVLRLSKTKITGEGLGHL 1622
Query: 459 QSRDLPNL 466
+DLP L
Sbjct: 1623 --KDLPRL 1628
Score = 99.8 bits (247), Expect = 3e-18, Method: Composition-based stats.
Identities = 74/234 (31%), Positives = 117/234 (50%), Gaps = 20/234 (8%)
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
+L+L + DD ++ + + +L LNL ++D L +LK + L ++L I D+
Sbjct: 1264 FLDLKGTSVKDDDLKRLAGLKTLPKLNLENTLVSDTGLQYLKDIP-LNYISLIGTQITDK 1322
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
G L+ + +L L + T + +SG+ L + LE ++ + T I L L L +LK
Sbjct: 1323 GFGYLSNMPSLTTLYVGSTAISNSGVEQLKDMKQLEKLSFTNTQIDGVGLGHLKDLKNLK 1382
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
L L++ I+D L L L L L L +I DSG AYL++ KNL+
Sbjct: 1383 ILGLESTSISDVDLQHLHGLKILIVLGLSNCKIADSGLAYLKDLKNLK------------ 1430
Query: 412 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 465
L++ ++ IT GL+HL LK L++L L+ KVT I LQ + LPN
Sbjct: 1431 ------VLSLDSTPITDEGLKHLSGLKMLQTLELQKTKVTPQGIASLQ-KALPN 1477
Score = 99.8 bits (247), Expect = 3e-18, Method: Composition-based stats.
Identities = 74/243 (30%), Positives = 119/243 (48%), Gaps = 27/243 (11%)
Query: 55 QGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
Q +L + L +++TD GL+HL+ NL+ L + +I+ GL HL+ L L ++
Sbjct: 1576 QMQNLEEIFLDYTNITDEGLLHLRGLQNLRVLRLS-KTKITGEGLGHLKDLPRLHTIDVN 1634
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDM 173
R AIT GMKA L L L++ +++ GL ++GL KLE L ITD +
Sbjct: 1635 RA-AITNSGMKAMGDLKQLTSLNISFNSQVDDTGLGYIEGLTKLEKLFAHLVPKITDEGL 1693
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K L G+ L+SL +S + +T +G L+ L+ SL L
Sbjct: 1694 KHLQGMKQLESLTLSSTGITTTG------------------------LEQLTKHESLSKL 1729
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+L C+++D G E + +L+ L L ++D L HL L LE+L+L + +G+
Sbjct: 1730 DLTNCKITDSGLEHLQDLKNLRDLRLDLTPVSDAGLQHLYSLKKLENLDLRETKVTSQGI 1789
Query: 294 VNL 296
+L
Sbjct: 1790 ADL 1792
Score = 99.4 bits (246), Expect = 3e-18, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 106/211 (50%), Gaps = 1/211 (0%)
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
+ L+L+G V L L+ L +L LNL +SD G + I L ++L +IT
Sbjct: 1262 INFLDLKGTSVKDDDLKRLAGLKTLPKLNLENTLVSDTGLQYLKDI-PLNYISLIGTQIT 1320
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
D+ +L + +L +L + S I + G+ L + L+ L ++TQ+ GL HL L N
Sbjct: 1321 DKGFGYLSNMPSLTTLYVGSTAISNSGVEQLKDMKQLEKLSFTNTQIDGVGLGHLKDLKN 1380
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L+ + L T ISD L+ L GL L L L +I D+GLA L L L L L IT
Sbjct: 1381 LKILGLESTSISDVDLQHLHGLKILIVLGLSNCKIADSGLAYLKDLKNLKVLSLDSTPIT 1440
Query: 386 DSGAAYLRNFKNLRSLEICGGGLTDAGLTGL 416
D G +L K L++LE+ +T G+ L
Sbjct: 1441 DEGLKHLSGLKMLQTLELQKTKVTPQGIASL 1471
>gi|46446377|ref|YP_007742.1| hypothetical protein pc0743 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400018|emb|CAF23467.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 765
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 161/456 (35%), Positives = 243/456 (53%), Gaps = 21/456 (4%)
Query: 13 ELVYSR--CLTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDV 69
EL +S+ LT+ L A ++C L+ L L + D + + ++L +DLSG ++
Sbjct: 262 ELNFSKNAHLTDAHLLALKNCENLKVLNLQACHNLTDAGLAHLTPL-AALKHLDLSGCEL 320
Query: 70 TDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAG 129
TD GL+HL + LQ LD + C +D GL HL+ L L L+ +T G+
Sbjct: 321 TDDGLVHLTPLAALQHLDLSHCRNFTDAGLAHLKLLVALQHLNLSHCGKLTDAGLAHLKL 380
Query: 130 LINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
L+ L LDL C GL +LK L+ L+ LN+ +C +TD+ + L+ L L+ L ++
Sbjct: 381 LVALQHLDLSHCRNFTDAGLAHLKLLVALQHLNLSYCGNLTDAGLAHLTPLMALQHLDLN 440
Query: 189 -CSKVTDSGIAYLKGLQKLTLLNLE-GCPVTAACLDSLSALGSLFYLNLNRC-QLSDDGC 245
C +TD+G+ +L L L LNL T A L L+ L +L +LNL+ C +D G
Sbjct: 441 GCHNLTDAGLTHLTSLVVLQYLNLSWNYNFTDAGLAHLTPLMALQHLNLSYCGNFTDAGL 500
Query: 246 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKC 304
+ + +LK L+L E+TD+ L HLK L L+ LNL CG + D+GL +L L L+
Sbjct: 501 AHLTSLAALKHLDLIGCELTDDGLAHLKLLVALQHLNLSYCGKLTDDGLAHLKLLVALQH 560
Query: 305 LELSD-TQVGSSGLRHLSGLTNLESINLSFTG-ISDGSLRKLAGLSSLKSLNLDA-RQIT 361
L+LS ++ +GL HL L L+ +NLS G ++D L L L++L+ L+L ++T
Sbjct: 561 LDLSGCDKLTGAGLAHLKFLVALQHLNLSHCGKLTDDGLVNLTPLAALRHLDLSHCGKLT 620
Query: 362 DTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLT----- 414
GLA L L L HL+L ++TD+G L L+ L++ G LTDAGL
Sbjct: 621 GAGLAHLKFLVALQHLNLSHCGKLTDAGLVNLSPLMALQHLDLSHCGNLTDAGLVNLSPL 680
Query: 415 -GLVSLNVSN-SRITSAGLRHLKPLKNLRSLTLESC 448
L L++S+ +T GL +LK L L+ L L C
Sbjct: 681 MALQHLDLSHCGNLTDDGLVNLKFLVALQHLDLSHC 716
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 181/332 (54%), Gaps = 10/332 (3%)
Query: 58 SLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+L +DL+G ++TD+GL HL LQ L+ ++ +D GL HL L L L+
Sbjct: 433 ALQHLDLNGCHNLTDAGLTHLTSLVVLQYLNLSWNYNFTDAGLAHLTPLMALQHLNLSYC 492
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
T G+ L L LDL C GL +LK L+ L+ LN+ +C +TD + L
Sbjct: 493 GNFTDAGLAHLTSLAALKHLDLIGCELTDDGLAHLKLLVALQHLNLSYCGKLTDDGLAHL 552
Query: 177 SGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLN 234
L L+ L +S C K+T +G+A+LK L L LNL C +T L +L+ L +L +L+
Sbjct: 553 KLLVALQHLDLSGCDKLTGAGLAHLKFLVALQHLNLSHCGKLTDDGLVNLTPLAALRHLD 612
Query: 235 LNRC-QLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCG-IGDE 291
L+ C +L+ G + +L+ LNL ++TD LV+L L L+ L+L CG + D
Sbjct: 613 LSHCGKLTGAGLAHLKFLVALQHLNLSHCGKLTDAGLVNLSPLMALQHLDLSHCGNLTDA 672
Query: 292 GLVNLTGLCNLKCLELSDT-QVGSSGLRHLSGLTNLESINLSFTG-ISDGSLRKLAGLSS 349
GLVNL+ L L+ L+LS + GL +L L L+ ++LS G ++D L L+ L +
Sbjct: 673 GLVNLSPLMALQHLDLSHCGNLTDDGLVNLKFLVALQHLDLSHCGNLTDDGLAHLSPLIA 732
Query: 350 LKSLNLDAR-QITD-TGLAALTSLTGLTHLDL 379
L+ L+ +TD +GLA LTSL L HLDL
Sbjct: 733 LQHLDRSKYNNLTDGSGLAHLTSLVDLQHLDL 764
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 156/273 (57%), Gaps = 9/273 (3%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+ TD+GL HL + L+ LD C +++D GL HL+ L L L+ +T G+
Sbjct: 494 NFTDAGLAHLTSLAALKHLDLIGC-ELTDDGLAHLKLLVALQHLNLSYCGKLTDDGLAHL 552
Query: 128 AGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
L+ L LDL C ++ G GL +LK L+ L+ LN+ C +TD + L+ L L+ L
Sbjct: 553 KLLVALQHLDLSGCDKLTGAGLAHLKFLVALQHLNLSHCGKLTDDGLVNLTPLAALRHLD 612
Query: 187 IS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDD 243
+S C K+T +G+A+LK L L LNL C +T A L +LS L +L +L+L+ C L+D
Sbjct: 613 LSHCGKLTGAGLAHLKFLVALQHLNLSHCGKLTDAGLVNLSPLMALQHLDLSHCGNLTDA 672
Query: 244 GCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCN 301
G S + +L+ L+L +TD+ LV+LK L L+ L+L CG + D+GL +L+ L
Sbjct: 673 GLVNLSPLMALQHLDLSHCGNLTDDGLVNLKFLVALQHLDLSHCGNLTDDGLAHLSPLIA 732
Query: 302 LKCLELSDTQ--VGSSGLRHLSGLTNLESINLS 332
L+ L+ S SGL HL+ L +L+ ++LS
Sbjct: 733 LQHLDRSKYNNLTDGSGLAHLTSLVDLQHLDLS 765
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 146/277 (52%), Gaps = 24/277 (8%)
Query: 190 SKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
+ +TD+ + LK + L +LNL+ C +T A L L+ L +L +L+L+ C+L+DDG
Sbjct: 269 AHLTDAHLLALKNCENLKVLNLQACHNLTDAGLAHLTPLAALKHLDLSGCELTDDGLVHL 328
Query: 249 SKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLE 306
+ + +L+ L+L TD L HLK L L+ LNL CG + D GL +L L L+ L+
Sbjct: 329 TPLAALQHLDLSHCRNFTDAGLAHLKLLVALQHLNLSHCGKLTDAGLAHLKLLVALQHLD 388
Query: 307 LSDTQ-VGSSGLRHLSGLTNLESINLSFTG-ISDGSLRKLAGLSSLKSLNLDA-RQITDT 363
LS + +GL HL L L+ +NLS+ G ++D L L L +L+ L+L+ +TD
Sbjct: 389 LSHCRNFTDAGLAHLKLLVALQHLNLSYCGNLTDAGLAHLTPLMALQHLDLNGCHNLTDA 448
Query: 364 GLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVS 422
GL LTSL L +L+L + TD+G A+L L+ L + G
Sbjct: 449 GLTHLTSLVVLQYLNLSWNYNFTDAGLAHLTPLMALQHLNLSYCG--------------- 493
Query: 423 NSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
T AGL HL L L+ L L C++T + + L+
Sbjct: 494 --NFTDAGLAHLTSLAALKHLDLIGCELTDDGLAHLK 528
>gi|46447096|ref|YP_008461.1| hypothetical protein pc1462 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400737|emb|CAF24186.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 870
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 169/469 (36%), Positives = 244/469 (52%), Gaps = 53/469 (11%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNF 90
ALQ+L L + + D + ++S ++L +DLSG D+TD+GL HL +LQ LD +
Sbjct: 385 ALQNLDLSECYLLKDTGLAHLSSL-TALQYLDLSGCDDLTDAGLAHLTPLVSLQHLDLSK 443
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLV 149
C ++ GL HL L L L +T G+ L L LDL C + GLV
Sbjct: 444 CENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLTALKHLDLSECKNLTDDGLV 503
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-----SCSKVTDSGIAYLKGLQ 204
+L L+ L+ L++K C +TD+ + L+ LT L+ L + C +TD G+A+L L
Sbjct: 504 HLSSLVALQYLSLKLCENLTDAGLAHLTSLTALEHLDLGLDFGYCQNLTDDGLAHLSSLT 563
Query: 205 KLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGFN 262
L L+L +T A L L++L +L +L+L+ C+ L+D+G + + +L+ L+L +
Sbjct: 564 ALKHLDLSWRENLTDAGLAHLTSLTALKHLDLSWCENLTDEGLAYLTPLVALQYLSLKGS 623
Query: 263 EITDECLVHLKGLTNLESLNLDSCG--IGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRH 319
+ITDE L HL L+ L L+L+ C GL +LT L NL+ L+LS + S L
Sbjct: 624 DITDEGLEHLAHLSALRHLSLNDCRRIYHGYGLAHLTTLVNLEHLDLSGCYSLSSFKLIF 683
Query: 320 LSGLTNLESINLS--FTGISDGSLRKLAGLSSLKSLNLDA-------------------- 357
LS L NL+ +NLS F DG L L L +L+ L+L +
Sbjct: 684 LSSLVNLQHLNLSGCFGLYHDG-LEDLTPLMNLQYLDLSSCINLTDKGLAYLTSLVGLGL 742
Query: 358 --------RQITDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG-GG 407
++ITDTGLA LTSL GL +LDL + +TD G AYL +F L+ L + G
Sbjct: 743 QHLDLSGCKEITDTGLAHLTSLVGLEYLDLSWCENLTDKGLAYLTSFAGLKYLNLKGCKK 802
Query: 408 LTDAGLTGLVSL------NVSN-SRITSAGLRHLKPLKNLRSLTLESCK 449
+TDAGL L SL N+S +T GL HL L NL+ L L CK
Sbjct: 803 ITDAGLAHLTSLVTLQRLNLSECVNLTDTGLAHLVSLVNLQDLELRECK 851
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 159/453 (35%), Positives = 219/453 (48%), Gaps = 76/453 (16%)
Query: 71 DSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGL 130
D+GL HL + LQ+LD + C + D GL HL L+ L L + +T G+ L
Sbjct: 374 DTGLAHLTSLTALQNLDLSECYLLKDTGLAHLSSLTALQYLDLSGCDDLTDAGLAHLTPL 433
Query: 131 INLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS- 188
++L LDL +C + G GL +L L+ L L + C +TD+ + L+ LT LK L +S
Sbjct: 434 VSLQHLDLSKCENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLTALKHLDLSE 493
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNL----NRCQ-LSD 242
C +TD G+ +L L L L+L+ C +T A L L++L +L +L+L CQ L+D
Sbjct: 494 CKNLTDDGLVHLSSLVALQYLSLKLCENLTDAGLAHLTSLTALEHLDLGLDFGYCQNLTD 553
Query: 243 DGCEKFSKIGSLKVLNLGFNE-ITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLC 300
DG S + +LK L+L + E +TD L HL LT L+ L+L C + DEGL LT L
Sbjct: 554 DGLAHLSSLTALKHLDLSWRENLTDAGLAHLTSLTALKHLDLSWCENLTDEGLAYLTPLV 613
Query: 301 NLKCLELSDTQVGSSGLRH----------------------------------------- 319
L+ L L + + GL H
Sbjct: 614 ALQYLSLKGSDITDEGLEHLAHLSALRHLSLNDCRRIYHGYGLAHLTTLVNLEHLDLSGC 673
Query: 320 ----------LSGLTNLESINLS--FTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLA 366
LS L NL+ +NLS F DG L L L +L+ L+L + +TD GLA
Sbjct: 674 YSLSSFKLIFLSSLVNLQHLNLSGCFGLYHDG-LEDLTPLMNLQYLDLSSCINLTDKGLA 732
Query: 367 ALTSLT--GLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEICG-GGLTDAGL------TGL 416
LTSL GL HLDL G + ITD+G A+L + L L++ LTD GL GL
Sbjct: 733 YLTSLVGLGLQHLDLSGCKEITDTGLAHLTSLVGLEYLDLSWCENLTDKGLAYLTSFAGL 792
Query: 417 VSLNVSN-SRITSAGLRHLKPLKNLRSLTLESC 448
LN+ +IT AGL HL L L+ L L C
Sbjct: 793 KYLNLKGCKKITDAGLAHLTSLVTLQRLNLSEC 825
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 156/310 (50%), Gaps = 11/310 (3%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
++TD GL HL + L+ LD ++ ++D GL HL L+ L L +T +G+
Sbjct: 550 NLTDDGLAHLSSLTALKHLDLSWRENLTDAGLAHLTSLTALKHLDLSWCENLTDEGLAYL 609
Query: 128 AGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITD-SDMKPLSGLTNLKSLQ 186
L+ L L L+ GL +L L L L++ C I + L+ L NL+ L
Sbjct: 610 TPLVALQYLSLKGSDITDEGLEHLAHLSALRHLSLNDCRRIYHGYGLAHLTTLVNLEHLD 669
Query: 187 IS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDD 243
+S C ++ + +L L L LNL GC + L+ L+ L +L YL+L+ C L+D
Sbjct: 670 LSGCYSLSSFKLIFLSSLVNLQHLNLSGCFGLYHDGLEDLTPLMNLQYLDLSSCINLTDK 729
Query: 244 GCEKFSKIGSLKVLNL---GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGL 299
G + + L + +L G EITD L HL L LE L+L C + D+GL LT
Sbjct: 730 GLAYLTSLVGLGLQHLDLSGCKEITDTGLAHLTSLVGLEYLDLSWCENLTDKGLAYLTSF 789
Query: 300 CNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL-D 356
LK L L ++ +GL HL+ L L+ +NLS ++D L L L +L+ L L +
Sbjct: 790 AGLKYLNLKGCKKITDAGLAHLTSLVTLQRLNLSECVNLTDTGLAHLVSLVNLQDLELRE 849
Query: 357 ARQITDTGLA 366
+ ITDTGLA
Sbjct: 850 CKSITDTGLA 859
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 3/142 (2%)
Query: 33 LQDLCLGQYPGVNDKWMDVIAS-QGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNF 90
LQ L L + DK + + S G L +DLSG ++TD+GL HL L+ LD ++
Sbjct: 715 LQYLDLSSCINLTDKGLAYLTSLVGLGLQHLDLSGCKEITDTGLAHLTSLVGLEYLDLSW 774
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLV 149
C ++D GL +L + L L+ + IT G+ L+ L +L+L C + GL
Sbjct: 775 CENLTDKGLAYLTSFAGLKYLNLKGCKKITDAGLAHLTSLVTLQRLNLSECVNLTDTGLA 834
Query: 150 NLKGLMKLESLNIKWCNCITDS 171
+L L+ L+ L ++ C ITD+
Sbjct: 835 HLVSLVNLQDLELRECKSITDT 856
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 91/185 (49%), Gaps = 24/185 (12%)
Query: 276 TNLESLNLDSCGIGDEG-LVNLTGLCNLK--CLELSDTQVGSSGLRHLSGLTNLESINLS 332
T++E LNL E + L NLK CL++ T + +GL HL+ LT L++++LS
Sbjct: 334 TDIEELNLSGKDFFTEAHFLALKNCKNLKVLCLKIFYTPI-DTGLAHLTSLTALQNLDLS 392
Query: 333 FTGI-SDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGAR-ITDSGA 389
+ D L L+ L++L+ L+L +TD GLA LT L L HLDL +T G
Sbjct: 393 ECYLLKDTGLAHLSSLTALQYLDLSGCDDLTDAGLAHLTPLVSLQHLDLSKCENLTGDGL 452
Query: 390 AYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
A+L LR L GL+D +T AGL HL PL L+ L L CK
Sbjct: 453 AHLTPLVALRHL-----GLSDC------------RNLTDAGLAHLTPLTALKHLDLSECK 495
Query: 450 VTAND 454
+D
Sbjct: 496 NLTDD 500
>gi|298709085|emb|CBJ31033.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
Length = 573
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 168/520 (32%), Positives = 241/520 (46%), Gaps = 68/520 (13%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQ---GSS 58
LPR++ + L R L+ +L AFRDC + L LG+ GV + W+ + G
Sbjct: 22 LPREVVDALLGSLTQHRALSSYALRAFRDCEVTSLALGECRGVRNGWVRELLQATPCGRC 81
Query: 59 LLSVDLSG-SDVTDSGL-----------IHLKDCSNL--------------QSLDFNFCI 92
++++DLS + +TD+GL L+ CS L ++L C
Sbjct: 82 IVTLDLSSCTGLTDTGLSDLPALKSLESASLRRCSGLGTEATLCLSNSPGLETLSLAHCP 141
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN-L 151
+ D + +L GLS L SL I+ +G++ L +L L+ RC HG V+ L
Sbjct: 142 LLDDAAVGNLAGLSRLRSLELEGCENISDEGLRLACRLPSLTCLNASRC---HGLTVDGL 198
Query: 152 KGLMK----LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIA--------- 198
GL + L+ LN+ WC + + G +
Sbjct: 199 AGLEQAAGGLKRLNLGWCAGLVRGSAAAGGRGGEESDDEDDEDDEDGGGDSDDEGLGGGR 258
Query: 199 --------YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC---QLSDDGCEK 247
L L KL + L + L LSA GS +L+ C +L++ G
Sbjct: 259 RRRRRGRWVLPVLPKLERVCLARSGIGNEGLSRLSA-GSPLLRDLDLCGCVRLTESGAHT 317
Query: 248 FSKIGSLKVLNLGFNEITDECLVHL-KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE 306
S + L+ L+L N C+ L + L L +LNLD C +GD G+ L+ L L+ L
Sbjct: 318 LSALQDLETLDLS-NCRVYSCVEELAQKLPGLTALNLDRCNVGDTGVRALSSLTKLERLN 376
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA 366
L+DT + +G+ HL+ LT L +NL F I+D L LA LS+L LNLD R + D G+
Sbjct: 377 LADTSITDAGMTHLAPLTRLRDLNLFFCHITDAGLGPLAALSNLVRLNLDTRDVGDAGMV 436
Query: 367 ALTSLTGLTHLDLFGARITDSGAAY-LRNFKNLRSLEICGGGLTDAGL------TGLVSL 419
LT L L LD+F A ITD G A+ L L +LE+C G LTD GL L L
Sbjct: 437 QLTRLRLLESLDVFSASITDFGVAHGLCRLPCLTTLEVCSGRLTDRGLYHLSRVKSLTRL 496
Query: 420 NVS-NSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
NVS N IT+AG+RH+ L LRSL L SC +T + + L
Sbjct: 497 NVSQNFGITAAGVRHVGTLTRLRSLNLSSCNITPSSLNSL 536
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 140/286 (48%), Gaps = 25/286 (8%)
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
C ++T+SG L LQ L L+L C V + + L L LNL+RC + D G
Sbjct: 307 CVRLTESGAHTLSALQDLETLDLSNCRVYSCVEELAQKLPGLTALNLDRCNVGDTGVRAL 366
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
S + L+ LNL ITD + HL LT L LNL C I D GL L L NL L L
Sbjct: 367 SSLTKLERLNLADTSITDAGMTHLAPLTRLRDLNLFFCHITDAGLGPLAALSNLVRLNLD 426
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISD-GSLRKLAGLSSLKSLNLDARQITDTGLAA 367
VG +G+ L+ L LES+++ I+D G L L L +L + + ++TD GL
Sbjct: 427 TRDVGDAGMVQLTRLRLLESLDVFSASITDFGVAHGLCRLPCLTTLEVCSGRLTDRGLYH 486
Query: 368 LTSLTGLTHLDL---FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNS 424
L+ + LT L++ FG IT +G ++ LR SLN+S+
Sbjct: 487 LSRVKSLTRLNVSQNFG--ITAAGVRHVGTLTRLR------------------SLNLSSC 526
Query: 425 RITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFR 470
IT + L L L NL SL++ C++ D++ L+ + LPNL R
Sbjct: 527 NITPSSLNSLTGLVNLESLSVFGCRLEMTDLELLREK-LPNLRVVR 571
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 144/296 (48%), Gaps = 35/296 (11%)
Query: 138 LERCTRIHGGLVNLKGLMKLES-----LNIKWCNCI--TDSDMKPLSGLTNLKSLQISCS 190
LER G+ N +GL +L + ++ C C+ T+S LS L +L++L +S
Sbjct: 274 LERVCLARSGIGN-EGLSRLSAGSPLLRDLDLCGCVRLTESGAHTLSALQDLETLDLSNC 332
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
+V + L LT LNL+ C V + +LS+L L LNL ++D G +
Sbjct: 333 RVYSCVEELAQKLPGLTALNLDRCNVGDTGVRALSSLTKLERLNLADTSITDAGMTHLAP 392
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT------------- 297
+ L+ LNL F ITD L L L+NL LNLD+ +GD G+V LT
Sbjct: 393 LTRLRDLNLFFCHITDAGLGPLAALSNLVRLNLDTRDVGDAGMVQLTRLRLLESLDVFSA 452
Query: 298 ---------GLCNLKC---LELSDTQVGSSGLRHLSGLTNLESINLSFT-GISDGSLRKL 344
GLC L C LE+ ++ GL HLS + +L +N+S GI+ +R +
Sbjct: 453 SITDFGVAHGLCRLPCLTTLEVCSGRLTDRGLYHLSRVKSLTRLNVSQNFGITAAGVRHV 512
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN-FKNLR 399
L+ L+SLNL + IT + L +LT L L L +FG R+ + LR NLR
Sbjct: 513 GTLTRLRSLNLSSCNITPSSLNSLTGLVNLESLSVFGCRLEMTDLELLREKLPNLR 568
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 115/240 (47%), Gaps = 29/240 (12%)
Query: 49 MDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNL 108
++ +A + L +++L +V D+G+ L + L+ L+ I+D G+ HL L+ L
Sbjct: 338 VEELAQKLPGLTALNLDRCNVGDTGVRALSSLTKLERLNLAD-TSITDAGMTHLAPLTRL 396
Query: 109 TSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCI 168
L+ + IT G+ A L NLV+L+L+ G+V L L LESL++ + I
Sbjct: 397 RDLNLFFCH-ITDAGLGPLAALSNLVRLNLDTRDVGDAGMVQLTRLRLLESLDV-FSASI 454
Query: 169 TDSDMKP-LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL-EGCPVTAACLDSLSA 226
TD + L L L +L++ ++TD G+ +L ++ LT LN+ + +TAA + +
Sbjct: 455 TDFGVAHGLCRLPCLTTLEVCSGRLTDRGLYHLSRVKSLTRLNVSQNFGITAAGVRHVGT 514
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC 286
L L LNL+ C IT L L GL NLESL++ C
Sbjct: 515 LTRLRSLNLSSCN------------------------ITPSSLNSLTGLVNLESLSVFGC 550
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 24/134 (17%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLD-FNFCI----------------------- 92
S+L+ ++L DV D+G++ L L+SLD F+ I
Sbjct: 418 SNLVRLNLDTRDVGDAGMVQLTRLRLLESLDVFSASITDFGVAHGLCRLPCLTTLEVCSG 477
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
+++D GL HL + +LT L+ +N ITA G++ L L L+L C L +L
Sbjct: 478 RLTDRGLYHLSRVKSLTRLNVSQNFGITAAGVRHVGTLTRLRSLNLSSCNITPSSLNSLT 537
Query: 153 GLMKLESLNIKWCN 166
GL+ LESL++ C
Sbjct: 538 GLVNLESLSVFGCR 551
>gi|168698161|ref|ZP_02730438.1| hypothetical protein GobsU_01477 [Gemmata obscuriglobus UQM 2246]
Length = 417
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 127/351 (36%), Positives = 191/351 (54%), Gaps = 9/351 (2%)
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
G+K AGL L L+L G+ L G L +LN+ + +TD +K L+G
Sbjct: 64 AGVKELAGLKALTTLNLGATKVTDVGVKELAGFKALTTLNLSFTT-LTDVGVKELAGFKA 122
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ-L 240
L +L+++ + VTD+G+ L GL+ LT L L G VT A + L++L L L L + +
Sbjct: 123 LTTLELNYTDVTDAGVKELAGLKALTTLGLGGTKVTDAGVKELASLKELSVLGLFAAKAV 182
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
+D G ++ + + +L L LG ++TD + L GL L +L+L G+ D G+ L GL
Sbjct: 183 TDAGVKELAGLKALTTLELGLTKVTDAGVKELAGLKALTTLDLHYTGVTDAGVKELAGLK 242
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
L L+L +T V +G++ L+GL L ++NL ++D +++LAGL +L +LNL ++
Sbjct: 243 ALSVLDLGNTGVTDAGVKELAGLKALTTLNLGGAKVTDAGVKELAGLKALSTLNLGGTKV 302
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LT 414
TDTGL L LT LDL +TD+G L L L++ G LTDAG LT
Sbjct: 303 TDTGLKELAGFKALTTLDLSFTTLTDAGVKELAGLTALTLLDLSGTTLTDAGVKELAPLT 362
Query: 415 GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 465
L L + + +T AGL+ L LKNL +L L + KVT +K L + LP
Sbjct: 363 NLTMLYLGETGVTDAGLKELAGLKNLTALFLFNTKVTDAGVKELTAA-LPK 412
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 198/370 (53%), Gaps = 16/370 (4%)
Query: 88 FNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGG 147
F + +SD G++ L GL LT+L+ +T G+K AG L L+L T G
Sbjct: 55 FLYACPLSDAGVKELAGLKALTTLNLGATK-VTDVGVKELAGFKALTTLNLSFTTLTDVG 113
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
+ L G L +L + + + +TD+ +K L+GL L +L + +KVTD+G+ L L++L+
Sbjct: 114 VKELAGFKALTTLELNYTD-VTDAGVKELAGLKALTTLGLGGTKVTDAGVKELASLKELS 172
Query: 208 LLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
+L L VT A + L+ L +L L L +++D G ++ + + +L L+L + +TD
Sbjct: 173 VLGLFAAKAVTDAGVKELAGLKALTTLELGLTKVTDAGVKELAGLKALTTLDLHYTGVTD 232
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
+ L GL L L+L + G+ D G+ L GL L L L +V +G++ L+GL L
Sbjct: 233 AGVKELAGLKALSVLDLGNTGVTDAGVKELAGLKALTTLNLGGAKVTDAGVKELAGLKAL 292
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
++NL T ++D L++LAG +L +L+L +TD G+ L LT LT LDL G +TD
Sbjct: 293 STLNLGGTKVTDTGLKELAGFKALTTLDLSFTTLTDAGVKELAGLTALTLLDLSGTTLTD 352
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLN------VSNSRITSAGLRHLKPLKNL 440
+G L NL L + G+TDAGL L L + N+++T AG++ L
Sbjct: 353 AGVKELAPLTNLTMLYLGETGVTDAGLKELAGLKNLTALFLFNTKVTDAGVKEL------ 406
Query: 441 RSLTLESCKV 450
+ L CK+
Sbjct: 407 -TAALPKCKI 415
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 182/344 (52%), Gaps = 10/344 (2%)
Query: 133 LVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKV 192
+V + L C G+ L GL L +LN+ +TD +K L+G L +L +S + +
Sbjct: 51 VVSVFLYACPLSDAGVKELAGLKALTTLNL-GATKVTDVGVKELAGFKALTTLNLSFTTL 109
Query: 193 TDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIG 252
TD G+ L G + LT L L VT A + L+ L +L L L +++D G ++ + +
Sbjct: 110 TDVGVKELAGFKALTTLELNYTDVTDAGVKELAGLKALTTLGLGGTKVTDAGVKELASLK 169
Query: 253 SLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ 311
L VL L +TD + L GL L +L L + D G+ L GL L L+L T
Sbjct: 170 ELSVLGLFAAKAVTDAGVKELAGLKALTTLELGLTKVTDAGVKELAGLKALTTLDLHYTG 229
Query: 312 VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 371
V +G++ L+GL L ++L TG++D +++LAGL +L +LNL ++TD G+ L L
Sbjct: 230 VTDAGVKELAGLKALSVLDLGNTGVTDAGVKELAGLKALTTLNLGGAKVTDAGVKELAGL 289
Query: 372 TGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL------TGLVSLNVSNSR 425
L+ L+L G ++TD+G L FK L +L++ LTDAG+ T L L++S +
Sbjct: 290 KALSTLNLGGTKVTDTGLKELAGFKALTTLDLSFTTLTDAGVKELAGLTALTLLDLSGTT 349
Query: 426 ITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSF 469
+T AG++ L PL NL L L VT +K L L NL +
Sbjct: 350 LTDAGVKELAPLTNLTMLYLGETGVTDAGLKELAG--LKNLTAL 391
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 183/335 (54%), Gaps = 2/335 (0%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
+L +++L + VTD G+ L L +L+ +F ++D G++ L G LT+L +
Sbjct: 74 ALTTLNLGATKVTDVGVKELAGFKALTTLNLSFT-TLTDVGVKELAGFKALTTLELNYTD 132
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS 177
+T G+K AGL L L L G+ L L +L L + +TD+ +K L+
Sbjct: 133 -VTDAGVKELAGLKALTTLGLGGTKVTDAGVKELASLKELSVLGLFAAKAVTDAGVKELA 191
Query: 178 GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
GL L +L++ +KVTD+G+ L GL+ LT L+L VT A + L+ L +L L+L
Sbjct: 192 GLKALTTLELGLTKVTDAGVKELAGLKALTTLDLHYTGVTDAGVKELAGLKALSVLDLGN 251
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
++D G ++ + + +L LNLG ++TD + L GL L +LNL + D GL L
Sbjct: 252 TGVTDAGVKELAGLKALTTLNLGGAKVTDAGVKELAGLKALSTLNLGGTKVTDTGLKELA 311
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA 357
G L L+LS T + +G++ L+GLT L ++LS T ++D +++LA L++L L L
Sbjct: 312 GFKALTTLDLSFTTLTDAGVKELAGLTALTLLDLSGTTLTDAGVKELAPLTNLTMLYLGE 371
Query: 358 RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
+TD GL L L LT L LF ++TD+G L
Sbjct: 372 TGVTDAGLKELAGLKNLTALFLFNTKVTDAGVKEL 406
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 193/360 (53%), Gaps = 4/360 (1%)
Query: 55 QGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
G ++SV L ++D+G+ L L +L+ +++D G++ L G LT+L+
Sbjct: 47 SGKPVVSVFLYACPLSDAGVKELAGLKALTTLNLG-ATKVTDVGVKELAGFKALTTLNLS 105
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
+T G+K AG L L+L G+ L GL L +L + +TD+ +K
Sbjct: 106 FTT-LTDVGVKELAGFKALTTLELNYTDVTDAGVKELAGLKALTTLGLGGTK-VTDAGVK 163
Query: 175 PLSGLTNLKSLQISCSK-VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
L+ L L L + +K VTD+G+ L GL+ LT L L VT A + L+ L +L L
Sbjct: 164 ELASLKELSVLGLFAAKAVTDAGVKELAGLKALTTLELGLTKVTDAGVKELAGLKALTTL 223
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+L+ ++D G ++ + + +L VL+LG +TD + L GL L +LNL + D G+
Sbjct: 224 DLHYTGVTDAGVKELAGLKALSVLDLGNTGVTDAGVKELAGLKALTTLNLGGAKVTDAGV 283
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
L GL L L L T+V +GL+ L+G L +++LSFT ++D +++LAGL++L L
Sbjct: 284 KELAGLKALSTLNLGGTKVTDTGLKELAGFKALTTLDLSFTTLTDAGVKELAGLTALTLL 343
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL 413
+L +TD G+ L LT LT L L +TD+G L KNL +L + +TDAG+
Sbjct: 344 DLSGTTLTDAGVKELAPLTNLTMLYLGETGVTDAGLKELAGLKNLTALFLFNTKVTDAGV 403
>gi|46447590|ref|YP_008955.1| hypothetical protein pc1956 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401231|emb|CAF24680.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 659
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 150/406 (36%), Positives = 218/406 (53%), Gaps = 19/406 (4%)
Query: 65 SGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+ +TD+ L+ LK+C NL+ L C ++D GL HL L L L+ + +T G+
Sbjct: 234 ENAHLTDAHLLALKNCKNLKELHLQECRNLTDAGLVHLAPLVALKHLNLNFCDKLTNTGL 293
Query: 125 KAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
L L L+L C + GL +L L L+ LN+ +C+ +TD+ + LS LT L+
Sbjct: 294 AHLRPLTALQHLNLGNCRNLTDAGLAHLTPLTALQHLNLNFCDKLTDTGLVRLSPLTALQ 353
Query: 184 SLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QL 240
L +S C +TD+G+ +LK L L LNL C +T A L L L +L +L+L+ C L
Sbjct: 354 HLDLSDCENLTDAGLVHLKPLVALQHLNLSCCENLTDAGLVHLKLLVALQHLDLSDCNNL 413
Query: 241 SDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTG 298
+D G + + +L+ L+L + N +TD LVHLK LT L+ L+L C + D+GL +LT
Sbjct: 414 TDAGLAHLTPLTALQYLDLSYCNNLTDAGLVHLKFLTALQHLDLRGCDKVADDGLAHLTP 473
Query: 299 LCNLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLD 356
L L+ L LS + + +GL HL LT L+ + LS ++D L L L +L+ L+L
Sbjct: 474 LTALQALSLSQCRNLTDAGLGHLKLLTALQYLRLSQCWNLTDAGLIHLRPLVALQHLDLS 533
Query: 357 A-RQITDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG-GGLTDAG- 412
+TD GL LT L L HLDL + +T G A+LR+ L+ L + LTDAG
Sbjct: 534 YCGNLTDVGLVHLTPLMALQHLDLNYCENLTGDGLAHLRSLTTLQHLSLNQCWNLTDAGL 593
Query: 413 -----LTGLVSLNVSN-SRITSAGLRHLKPLKNLRSLTLESC-KVT 451
LT L L++S T GL HL L L+ L L C +VT
Sbjct: 594 VHLEPLTALQHLDLSYCGNFTDVGLVHLTSLMALQHLNLRGCDRVT 639
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/359 (35%), Positives = 193/359 (53%), Gaps = 18/359 (5%)
Query: 108 LTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCN 166
+ +L+F N +T + A NL +L L+ C + GLV+L L+ L+ LN+ +C+
Sbjct: 227 IEALNFSENAHLTDAHLLALKNCKNLKELHLQECRNLTDAGLVHLAPLVALKHLNLNFCD 286
Query: 167 CITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSL 224
+T++ + L LT L+ L + +C +TD+G+A+L L L LNL C +T L L
Sbjct: 287 KLTNTGLAHLRPLTALQHLNLGNCRNLTDAGLAHLTPLTALQHLNLNFCDKLTDTGLVRL 346
Query: 225 SALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGFNE-ITDECLVHLKGLTNLESLN 282
S L +L +L+L+ C+ L+D G + +L+ LNL E +TD LVHLK L L+ L+
Sbjct: 347 SPLTALQHLDLSDCENLTDAGLVHLKPLVALQHLNLSCCENLTDAGLVHLKLLVALQHLD 406
Query: 283 LDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLS-FTGISDG 339
L C + D GL +LT L L+ L+LS + +GL HL LT L+ ++L ++D
Sbjct: 407 LSDCNNLTDAGLAHLTPLTALQYLDLSYCNNLTDAGLVHLKFLTALQHLDLRGCDKVADD 466
Query: 340 SLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKN 397
L L L++L++L+L R +TD GL L LT L +L L +TD+G +LR
Sbjct: 467 GLAHLTPLTALQALSLSQCRNLTDAGLGHLKLLTALQYLRLSQCWNLTDAGLIHLRPLVA 526
Query: 398 LRSLEICG-GGLTDAGLTGLVSLNVSN-------SRITSAGLRHLKPLKNLRSLTLESC 448
L+ L++ G LTD GL L L +T GL HL+ L L+ L+L C
Sbjct: 527 LQHLDLSYCGNLTDVGLVHLTPLMALQHLDLNYCENLTGDGLAHLRSLTTLQHLSLNQC 585
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/368 (33%), Positives = 182/368 (49%), Gaps = 56/368 (15%)
Query: 46 DKWMD---VIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEH 101
DK D V S ++L +DLS ++TD+GL+HLK LQ L+ + C ++D GL H
Sbjct: 336 DKLTDTGLVRLSPLTALQHLDLSDCENLTDAGLVHLKPLVALQHLNLSCCENLTDAGLVH 395
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESL 160
L+ L L L N +T G+ L L LDL C + GLV+LK L L+ L
Sbjct: 396 LKLLVALQHLDLSDCNNLTDAGLAHLTPLTALQYLDLSYCNNLTDAGLVHLKFLTALQHL 455
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTA 218
+++ C+ + D + L+ LT L++L +S C +TD+G+ +LK L L L L C +T
Sbjct: 456 DLRGCDKVADDGLAHLTPLTALQALSLSQCRNLTDAGLGHLKLLTALQYLRLSQCWNLTD 515
Query: 219 ACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNE-ITDECLVHLKGLT 276
A L L L +L +L+L+ C L+D G + + +L+ L+L + E +T + L HL+ LT
Sbjct: 516 AGLIHLRPLVALQHLDLSYCGNLTDVGLVHLTPLMALQHLDLNYCENLTGDGLAHLRSLT 575
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
L+ L+L+ C NLT +GL HL LT L+ ++LS+ G
Sbjct: 576 TLQHLSLNQCW-------NLT----------------DAGLVHLEPLTALQHLDLSYCG- 611
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNF 395
TD GL LTSL L HL+L G R+TD G A + F
Sbjct: 612 ----------------------NFTDVGLVHLTSLMALQHLNLRGCDRVTDVGLALFKIF 649
Query: 396 KNLRSLEI 403
L+I
Sbjct: 650 ATSLHLKI 657
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 130/256 (50%), Gaps = 36/256 (14%)
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGF-NEITDECL 269
E +T A L +L +L L+L C+ L+D G + + +LK LNL F +++T+ L
Sbjct: 234 ENAHLTDAHLLALKNCKNLKELHLQECRNLTDAGLVHLAPLVALKHLNLNFCDKLTNTGL 293
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
HL+ LT L+ LNL +C NLT +GL HL+ LT L+ +
Sbjct: 294 AHLRPLTALQHLNLGNCR-------NLT----------------DAGLAHLTPLTALQHL 330
Query: 330 NLSF-TGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGAR-ITD 386
NL+F ++D L +L+ L++L+ L+L D +TD GL L L L HL+L +TD
Sbjct: 331 NLNFCDKLTDTGLVRLSPLTALQHLDLSDCENLTDAGLVHLKPLVALQHLNLSCCENLTD 390
Query: 387 SGAAYLRNFKNLRSLEICG-GGLTDAGLTGLVSLNVSN-------SRITSAGLRHLKPLK 438
+G +L+ L+ L++ LTDAGL L L + +T AGL HLK L
Sbjct: 391 AGLVHLKLLVALQHLDLSDCNNLTDAGLAHLTPLTALQYLDLSYCNNLTDAGLVHLKFLT 450
Query: 439 NLRSLTLESCKVTAND 454
L+ L L C A+D
Sbjct: 451 ALQHLDLRGCDKVADD 466
>gi|149174587|ref|ZP_01853213.1| hypothetical protein PM8797T_09949 [Planctomyces maris DSM 8797]
gi|148846697|gb|EDL61034.1| hypothetical protein PM8797T_09949 [Planctomyces maris DSM 8797]
Length = 540
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 142/409 (34%), Positives = 220/409 (53%), Gaps = 16/409 (3%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
L G+ +TDS L ++ NLQ L+ N ISD GL HLRGLS L L + G
Sbjct: 140 LRGTTITDSDLKYVGALKNLQKLNLN-NTAISDAGLAHLRGLSELRVLELE-GTQLDGTG 197
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+ L +L +LDL+ N G ES N + I D+ +K + L +LK
Sbjct: 198 LVYLKHLNHLEELDLDNYNN------NFVGWNDGESEN-EPRPQIRDAGLKHIGKLKHLK 250
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
L + ++++D G+A+L+ L+KL L ++ + L L +L L L+ ++SD
Sbjct: 251 KLSLFGAEISDVGLAHLQDLKKLESLEFARENISDKGVAHLKGLLNLTSLRLDGSRVSDA 310
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
G +K+ L+ L+LG I+D L+HL+ LT+L+SL+L + D+GL++L+ L NL+
Sbjct: 311 GLVHLAKLQKLQSLDLGNTSISDTGLIHLQELTSLKSLDLSDTAVSDDGLIHLSRLQNLE 370
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
L L T + GL L L+ L+ +++ ++ ++D L +A L SL SL L A ITD
Sbjct: 371 SLYLRSTNLSGVGLSSLKNLSMLQYLDMGYSKMNDQGLIAVAELGSLDSLGLFATPITDQ 430
Query: 364 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLN--- 420
GL L+ LT L LDL I+D+G +L + L+ L++ G +TDAGL L LN
Sbjct: 431 GLVHLSGLTNLKKLDLQETSISDAGLVHLSHLAGLKVLDLEGTRITDAGLIHLQGLNELE 490
Query: 421 ---VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
+ + ++ AGL+HLK L L+ L E ++T I L+ + LP+L
Sbjct: 491 QLELDKTAVSDAGLKHLKGLTKLQFLQYEETQITEAGINDLR-QSLPDL 538
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 138/423 (32%), Positives = 207/423 (48%), Gaps = 25/423 (5%)
Query: 60 LSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAI 119
+ +D ++++ I + NL+S+ I +GG +H+ GL NL LS R I
Sbjct: 88 VELDFEFGELSEEDFIAISQLKNLKSIHL-LITTIEEGGRKHITGLQNLELLSLR-GTTI 145
Query: 120 TAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI-------------KWCN 166
T +K L NL KL+L GL +L+GL +L L + K N
Sbjct: 146 TDSDLKYVGALKNLQKLNLNNTAISDAGLAHLRGLSELRVLELEGTQLDGTGLVYLKHLN 205
Query: 167 CITDSDMKPLS----GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
+ + D+ + G + +S ++ D+G+ ++ L+ L L+L G ++ L
Sbjct: 206 HLEELDLDNYNNNFVGWNDGESENEPRPQIRDAGLKHIGKLKHLKKLSLFGAEISDVGLA 265
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
L L L L R +SD G + +L L L + ++D LVHL L L+SL+
Sbjct: 266 HLQDLKKLESLEFARENISDKGVAHLKGLLNLTSLRLDGSRVSDAGLVHLAKLQKLQSLD 325
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
L + I D GL++L L +LK L+LSDT V GL HLS L NLES+ L T +S L
Sbjct: 326 LGNTSISDTGLIHLQELTSLKSLDLSDTAVSDDGLIHLSRLQNLESLYLRSTNLSGVGLS 385
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
L LS L+ L++ ++ D GL A+ L L L LF ITD G +L NL+ L+
Sbjct: 386 SLKNLSMLQYLDMGYSKMNDQGLIAVAELGSLDSLGLFATPITDQGLVHLSGLTNLKKLD 445
Query: 403 ICGGGLTDAGLT------GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIK 456
+ ++DAGL GL L++ +RIT AGL HL+ L L L L+ V+ +K
Sbjct: 446 LQETSISDAGLVHLSHLAGLKVLDLEGTRITDAGLIHLQGLNELEQLELDKTAVSDAGLK 505
Query: 457 RLQ 459
L+
Sbjct: 506 HLK 508
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 200/410 (48%), Gaps = 50/410 (12%)
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
G E G L F ++ + A + L NL + L T GG ++ GL L
Sbjct: 77 GEEKFLGFMTAVELDFEFGE-LSEEDFIAISQLKNLKSIHLLITTIEEGGRKHITGLQNL 135
Query: 158 ESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
E L+++ ITDSD+K + L NL+ L ++ + ++D+G+A+L+GL +L +L LEG +
Sbjct: 136 ELLSLR-GTTITDSDLKYVGALKNLQKLNLNNTAISDAGLAHLRGLSELRVLELEGTQLD 194
Query: 218 AACLDSLSALGSLFYLNLNR---------------------------------------- 237
L L L L L+L+
Sbjct: 195 GTGLVYLKHLNHLEELDLDNYNNNFVGWNDGESENEPRPQIRDAGLKHIGKLKHLKKLSL 254
Query: 238 --CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
++SD G + L+ L I+D+ + HLKGL NL SL LD + D GLV+
Sbjct: 255 FGAEISDVGLAHLQDLKKLESLEFARENISDKGVAHLKGLLNLTSLRLDGSRVSDAGLVH 314
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L L L+ L+L +T + +GL HL LT+L+S++LS T +SD L L+ L +L+SL L
Sbjct: 315 LAKLQKLQSLDLGNTSISDTGLIHLQELTSLKSLDLSDTAVSDDGLIHLSRLQNLESLYL 374
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----- 410
+ ++ GL++L +L+ L +LD+ +++ D G + +L SL + +TD
Sbjct: 375 RSTNLSGVGLSSLKNLSMLQYLDMGYSKMNDQGLIAVAELGSLDSLGLFATPITDQGLVH 434
Query: 411 -AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
+GLT L L++ + I+ AGL HL L L+ L LE ++T + LQ
Sbjct: 435 LSGLTNLKKLDLQETSISDAGLVHLSHLAGLKVLDLEGTRITDAGLIHLQ 484
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 124/265 (46%), Gaps = 48/265 (18%)
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
G EKF + L+ F E+++E + + L NL+S++L I + G ++TGL NL+
Sbjct: 77 GEEKFLGFMTAVELDFEFGELSEEDFIAISQLKNLKSIHLLITTIEEGGRKHITGLQNLE 136
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
L L T + S L+++ L NL+ +NL+ T ISD L L GLS L+ L L+ Q+ T
Sbjct: 137 LLSLRGTTITDSDLKYVGALKNLQKLNLNNTAISDAGLAHLRGLSELRVLELEGTQLDGT 196
Query: 364 GLAALTSLTGLTHLDL------------------------------------------FG 381
GL L L L LDL FG
Sbjct: 197 GLVYLKHLNHLEELDLDNYNNNFVGWNDGESENEPRPQIRDAGLKHIGKLKHLKKLSLFG 256
Query: 382 ARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLK 435
A I+D G A+L++ K L SLE ++D GL L SL + SR++ AGL HL
Sbjct: 257 AEISDVGLAHLQDLKKLESLEFARENISDKGVAHLKGLLNLTSLRLDGSRVSDAGLVHLA 316
Query: 436 PLKNLRSLTLESCKVTANDIKRLQS 460
L+ L+SL L + ++ + LQ
Sbjct: 317 KLQKLQSLDLGNTSISDTGLIHLQE 341
>gi|149176715|ref|ZP_01855326.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148844356|gb|EDL58708.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 1266
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 149/461 (32%), Positives = 219/461 (47%), Gaps = 53/461 (11%)
Query: 42 PGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEH 101
P ++DK + + S L S+ L+ + V+D GL L + L SL I+D L H
Sbjct: 272 PHIDDKSLACLKGL-SGLKSLTLNQTSVSDQGLQILNELKGLTSLTI-MQSPITDAALPH 329
Query: 102 LRGLSNLTSLSFRR-----------------------NNAITAQGMKAFAGLINLVKLDL 138
L GLS LTSL+ R + +T+ GM + K++
Sbjct: 330 LTGLSRLTSLNLARTAVTDAGMEHIIKLKQLKKLNLISTGVTSAGMARVHAALPKCKIET 389
Query: 139 ERCT--------------------RIHGGLVNLKGLMKLESL-NIKWC-NCITDSDMKPL 176
+ T I V G + E +I++ N I D+ +K L
Sbjct: 390 GKATAPGDSTQAQAAIAALKAQGAHIQNQRVFKNGKLTSEYFTSIRFFGNQIVDAQVKHL 449
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+ LKS+ + +TD +L GL +L L L G +T L +L+ L SL L+L+
Sbjct: 450 KHVPRLKSVSFISTSITDDCTRHLSGLSELETLQLPGTAITDKGLATLNDLKSLENLDLS 509
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
R ++D G K LK LNLG +TD L HLK L LESL L + + GL L
Sbjct: 510 RSGITDAGLVSLKKFPQLKTLNLGSTRVTDAGLTHLKALPKLESLKLYNTSVTGTGLSEL 569
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
L LK L+LS T + +GL+ +S L +L+S++L+ T I+ ++ L L+ L +L LD
Sbjct: 570 VTLPKLKTLDLSLTPLTETGLQTVSKLIHLQSLSLTKTKINSAGVKHLVPLTELTTLKLD 629
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL 416
QI DT LA++ LT L L+L ITD+G +L N K L+ L + +++AGL L
Sbjct: 630 YTQIDDTALASIAKLTKLRSLNLRKTEITDTGMVHLENLKPLKVLSLDETRVSNAGLKSL 689
Query: 417 VSLN------VSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
SL + + I AGL+ L + NL+SL L KVT
Sbjct: 690 QSLQQLYRLGLRETDIDDAGLKTLSSIFNLKSLDLYGTKVT 730
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 179/370 (48%), Gaps = 29/370 (7%)
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
S+ G+ + D+ + HLK L+S+ F I+D HL GLS L +L AIT
Sbjct: 433 SIRFFGNQIVDAQVKHLKHVPRLKSVSF-ISTSITDDCTRHLSGLSELETLQLP-GTAIT 490
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
+G+ L +L LDL R GLV+LK +L++LN+
Sbjct: 491 DKGLATLNDLKSLENLDLSRSGITDAGLVSLKKFPQLKTLNL------------------ 532
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
++VTD+G+ +LK L KL L L VT L L L L L+L+ L
Sbjct: 533 -------GSTRVTDAGLTHLKALPKLESLKLYNTSVTGTGLSELVTLPKLKTLDLSLTPL 585
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
++ G + SK+ L+ L+L +I + HL LT L +L LD I D L ++ L
Sbjct: 586 TETGLQTVSKLIHLQSLSLTKTKINSAGVKHLVPLTELTTLKLDYTQIDDTALASIAKLT 645
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
L+ L L T++ +G+ HL L L+ ++L T +S+ L+ L L L L L I
Sbjct: 646 KLRSLNLRKTEITDTGMVHLENLKPLKVLSLDETRVSNAGLKSLQSLQQLYRLGLRETDI 705
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN-FKNLRSLEICGGGLTDAGLTGLVSL 419
D GL L+S+ L LDL+G ++TD+G AY + L + G G+T+AG+ ++
Sbjct: 706 DDAGLKTLSSIFNLKSLDLYGTKVTDTGMAYFHDKLIKPTDLNLHGTGVTEAGV-AMLKQ 764
Query: 420 NVSNSRITSA 429
N RI ++
Sbjct: 765 QCPNCRIQAS 774
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 208/453 (45%), Gaps = 57/453 (12%)
Query: 41 YPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLE 100
Y ++D + IA + + L S++L +++TD+G++HL++ L+ L + ++S+ GL+
Sbjct: 630 YTQIDDTALASIA-KLTKLRSLNLRKTEITDTGMVHLENLKPLKVLSLDET-RVSNAGLK 687
Query: 101 HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK-GLMKLES 159
L+ L L L R + I G+K + + NL LDL G+ L+K
Sbjct: 688 SLQSLQQLYRLGLRETD-IDDAGLKTLSSIFNLKSLDLYGTKVTDTGMAYFHDKLIKPTD 746
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSL----QISCSKVTDSGI-AYLKGLQK--------- 205
LN+ +G+ LK +I S DSGI + L L+K
Sbjct: 747 LNLHGTGVTE-------AGVAMLKQQCPNCRIQASPPLDSGIQSILAKLKKSGGFYTRRR 799
Query: 206 ---------LTLLNLEGCPVTAACLDS----LSALGSLFYLNLNRCQLSDDGCEKFSKIG 252
+ L G + LD L+ L +L+ L++ L+D G + +
Sbjct: 800 LPENAEQLVVRFYPLPGREKKLSPLDERLSLLNGLKTLYELDVAGADLTDAGLKHLKHVP 859
Query: 253 SLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQV 312
L+VL L T+E L L L LE L +++ GI ++ L+ L + LK L Q+
Sbjct: 860 ELRVLKLNGGNFTEEGLKQLTQLKKLEVLQIENAGITNDQLIQLKEMTQLKIFILPQNQI 919
Query: 313 GSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT 372
GL+HLSGLTNL+ +NLS I + LA L +L+SL L+ ++ D GL L L
Sbjct: 920 TEHGLKHLSGLTNLKVLNLSQNRIYSDGMVHLASLENLRSLALEHTRVADQGLEDLLRLP 979
Query: 373 GLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLR 432
L L L G ITD G LR +L G++SLN ++ IT GL+
Sbjct: 980 RLNTLILDGTTITDGGTPLLRKMTSL----------------GMLSLN--STYITDRGLK 1021
Query: 433 HLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 465
L+ L+ L L L KV+ + +K Q R P
Sbjct: 1022 DLETLRGLYRLDLNDTKVSEDGVKNFQ-RSQPK 1053
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 215/478 (44%), Gaps = 52/478 (10%)
Query: 28 FRDCALQDLC---LGQYPGVNDKWMDVIASQGSSLLSVD---------LSGSDVTDSGLI 75
F++C L+D L Q+P + ++ + L+ + L + ++DSGL
Sbjct: 111 FQNCPLEDDAFQHLKQFPALTHLFVRHVPLTDQCLVHLKDLTQLEVLWLFATQISDSGLE 170
Query: 76 HLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
HL + L SL+ + +IS+ GL HL L L L +T+ G+ I K
Sbjct: 171 HLNNLKELNSLNL-YQTKISNAGLTHLSELKKLKQLEVNETK-VTSAGVAELQEAIPECK 228
Query: 136 -----------LDLERCTRIHGGLVNLKGLMK---LESLNIKWCNCITDSDMKPLSGLTN 181
L + R + GG V + L + L S+++ + I D + L GL+
Sbjct: 229 ILFDRPVLPAHLKVARQVKSLGGFVRYQDLDQHRLLSSISLSRPH-IDDKSLACLKGLSG 287
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
LKSL ++ + V+D G+ L L+ LT L + P+T A L L+ L L LNL R ++
Sbjct: 288 LKSLTLNQTSVSDQGLQILNELKGLTSLTIMQSPITDAALPHLTGLSRLTSLNLARTAVT 347
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
D G E K+ LK LNL +T + + L C I + G G
Sbjct: 348 DAGMEHIIKLKQLKKLNLISTGVTSAGMARVHA-------ALPKCKI-ETGKATAPGDST 399
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS-------DGSLRKLAGLSSLKSLN 354
++ + + +++ N + + FT I D ++ L + LKS++
Sbjct: 400 QAQAAIAALKAQGAHIQNQRVFKNGKLTSEYFTSIRFFGNQIVDAQVKHLKHVPRLKSVS 459
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT 414
+ ITD L+ L+ L L L G ITD G A L + K+L +L++ G+TDAGL
Sbjct: 460 FISTSITDDCTRHLSGLSELETLQLPGTAITDKGLATLNDLKSLENLDLSRSGITDAGLV 519
Query: 415 G------LVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
L +LN+ ++R+T AGL HLK L L SL L + VT + L + LP L
Sbjct: 520 SLKKFPQLKTLNLGSTRVTDAGLTHLKALPKLESLKLYNTSVTGTGLSELVT--LPKL 575
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 205/459 (44%), Gaps = 94/459 (20%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFN------------------FCIQISDGGL 99
+L +D++G+D+TD+GL HLK L+ L N +QI + G+
Sbjct: 836 TLYELDVAGADLTDAGLKHLKHVPELRVLKLNGGNFTEEGLKQLTQLKKLEVLQIENAGI 895
Query: 100 --EHLRGLSNLTSLSFR--RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLM 155
+ L L +T L N IT G+K +GL NL L+L + G+V+L L
Sbjct: 896 TNDQLIQLKEMTQLKIFILPQNQITEHGLKHLSGLTNLKVLNLSQNRIYSDGMVHLASLE 955
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 215
L SL ++ + D ++ L L L +L + + +TD G L+ + L +L+L
Sbjct: 956 NLRSLALEHTR-VADQGLEDLLRLPRLNTLILDGTTITDGGTPLLRKMTSLGMLSLNSTY 1014
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK--------------------IGSLK 255
+T L L L L+ L+LN ++S+DG + F + I LK
Sbjct: 1015 ITDRGLKDLETLRGLYRLDLNDTKVSEDGVKNFQRSQPKCNIEYAAPLASSLQYVIQELK 1074
Query: 256 -------VLNLGFNEITD--ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE 306
V+N G + + + E HL+G+ + + + + D L ++ + +LK L
Sbjct: 1075 EAGANVNVINQGHHYVIESVEFPNHLQGIFAIHN-RAEKAKVFDSCLKRISEMKDLKRLS 1133
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA 366
+ + ++ L ++ LT L ++LS + I D ++ L GL +L+ L L+ QITD G+A
Sbjct: 1134 MHWAEFDNTKLEYIKNLTYLSELDLSGSRIPDQGIKDLKGLVNLQKLKLEHTQITDAGVA 1193
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRI 426
L L L L SL++ +S+
Sbjct: 1194 QLAQLQ----------------------------------------LNRLYSLDLDHSKT 1213
Query: 427 TSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 465
T+A L LK ++ LR L+L+ +++A D+++ + + LP+
Sbjct: 1214 TAACLESLKDMQRLRFLSLQHLELSAADLEKFK-QALPS 1251
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 148/324 (45%), Gaps = 44/324 (13%)
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
+ S+ + +K+TD+ I ++ L+ + L ++ + L SL+ L L L C L
Sbjct: 57 KIDSVSFTNNKITDTQIKFINHLKDIRKLGFYNVKISGSGLQSLTNLKHLQNLEFQNCPL 116
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
DD + + +L L + +TD+CLVHLK LT LE L L + I D GL +L L
Sbjct: 117 EDDAFQHLKQFPALTHLFVRHVPLTDQCLVHLKDLTQLEVLWLFATQISDSGLEHLNNLK 176
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG--------------------- 339
L L L T++ ++GL HLS L L+ + ++ T ++
Sbjct: 177 ELNSLNLYQTKISNAGLTHLSELKKLKQLEVNETKVTSAGVAELQEAIPECKILFDRPVL 236
Query: 340 --------SLRKLAGLSS---------LKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
++ L G L S++L I D LA L L+GL L L
Sbjct: 237 PAHLKVARQVKSLGGFVRYQDLDQHRLLSSISLSRPHIDDKSLACLKGLSGLKSLTLNQT 296
Query: 383 RITDSGAAYLRNFKNLRSLEICGGGLTDA------GLTGLVSLNVSNSRITSAGLRHLKP 436
++D G L K L SL I +TDA GL+ L SLN++ + +T AG+ H+
Sbjct: 297 SVSDQGLQILNELKGLTSLTIMQSPITDAALPHLTGLSRLTSLNLARTAVTDAGMEHIIK 356
Query: 437 LKNLRSLTLESCKVTANDIKRLQS 460
LK L+ L L S VT+ + R+ +
Sbjct: 357 LKQLKKLNLISTGVTSAGMARVHA 380
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 131/286 (45%), Gaps = 38/286 (13%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N ITD+ +K ++ L +++ L K++ SG+ L L+ L L + CP+ L
Sbjct: 66 NKITDTQIKFINHLKDIRKLGFYNVKISGSGLQSLTNLKHLQNLEFQNCPLEDDAFQHLK 125
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
+L +L + L+D + L+VL L +I+D L HL L L SLNL
Sbjct: 126 QFPALTHLFVRHVPLTDQCLVHLKDLTQLEVLWLFATQISDSGLEHLNNLKELNSLNLYQ 185
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSG----------------------------- 316
I + GL +L+ L LK LE+++T+V S+G
Sbjct: 186 TKISNAGLTHLSELKKLKQLEVNETKVTSAGVAELQEAIPECKILFDRPVLPAHLKVARQ 245
Query: 317 LRHLSGLTN---------LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAA 367
++ L G L SI+LS I D SL L GLS LKSL L+ ++D GL
Sbjct: 246 VKSLGGFVRYQDLDQHRLLSSISLSRPHIDDKSLACLKGLSGLKSLTLNQTSVSDQGLQI 305
Query: 368 LTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL 413
L L GLT L + + ITD+ +L L SL + +TDAG+
Sbjct: 306 LNELKGLTSLTIMQSPITDAALPHLTGLSRLTSLNLARTAVTDAGM 351
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 131/484 (27%), Positives = 209/484 (43%), Gaps = 102/484 (21%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
++ SGL L + +LQ+L+F C + D +HL+ LT L F R+ +T Q +
Sbjct: 92 ISGSGLQSLTNLKHLQNLEFQNC-PLEDDAFQHLKQFPALTHL-FVRHVPLTDQCLVHLK 149
Query: 129 GLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
L L L L GL +L L +L SLN+ + I+++ + LS L LK L+++
Sbjct: 150 DLTQLEVLWLFATQISDSGLEHLNNLKELNSLNL-YQTKISNAGLTHLSELKKLKQLEVN 208
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS--LSALGSLFYLNLNRCQLSDDGCE 246
+KVT +G+A L+ E P D L A +L + R S G
Sbjct: 209 ETKVTSAGVAELQ----------EAIPECKILFDRPVLPA-----HLKVARQVKSLGGFV 253
Query: 247 KFSKIGSLKVL---NLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
++ + ++L +L I D+ L LKGL+ L+SL L+ + D+GL L L L
Sbjct: 254 RYQDLDQHRLLSSISLSRPHIDDKSLACLKGLSGLKSLTLNQTSVSDQGLQILNELKGLT 313
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
L + + + + L HL+GL+ L S+NL+ T ++D + + L LK LNL + +T
Sbjct: 314 SLTIMQSPITDAALPHLTGLSRLTSLNLARTAVTDAGMEHIIKLKQLKKLNLISTGVTSA 373
Query: 364 GLAALTSL-------TG----------------------------------------LTH 376
G+A + + TG T
Sbjct: 374 GMARVHAALPKCKIETGKATAPGDSTQAQAAIAALKAQGAHIQNQRVFKNGKLTSEYFTS 433
Query: 377 LDLFGARITDSGAAYLRNFKNLRS------------------------LEICGGGLTDAG 412
+ FG +I D+ +L++ L+S L++ G +TD G
Sbjct: 434 IRFFGNQIVDAQVKHLKHVPRLKSVSFISTSITDDCTRHLSGLSELETLQLPGTAITDKG 493
Query: 413 LT------GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
L L +L++S S IT AGL LK L++L L S +VT + L++ LP L
Sbjct: 494 LATLNDLKSLENLDLSRSGITDAGLVSLKKFPQLKTLNLGSTRVTDAGLTHLKA--LPKL 551
Query: 467 VSFR 470
S +
Sbjct: 552 ESLK 555
>gi|46446667|ref|YP_008032.1| hypothetical protein pc1033 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400308|emb|CAF23757.1| hypothetical protein pc1033 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 662
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 151/397 (38%), Positives = 218/397 (54%), Gaps = 22/397 (5%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD+GL HL + LQ L C ++++ GL HL L+ L L+ +T G+
Sbjct: 262 LTDAGLAHLTPLTALQHLGLGQCWRLTNAGLAHLTPLTALQYLNLSEYKNLTDAGLAHLT 321
Query: 129 GLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L L L L C + GL +L LM L+ L++ C +TD+ + L+ LT L+ L +
Sbjct: 322 PLTALQHLGLSGCQNLTDAGLAHLTPLMGLQHLDLSGCQNLTDAGLAHLTPLTGLQHLNL 381
Query: 188 S-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQ-LSDDG 244
S C+K+TD+G+A+L L L L+L GC +T A L L+ L L +L+L+ CQ L+D G
Sbjct: 382 SRCNKLTDAGLAHLTPLTGLQHLDLSGCQNLTDAGLAHLTPLTGLQHLDLSGCQNLTDAG 441
Query: 245 CEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNL 302
+ + L+ LNL + TD L HL L+ L+ LNL C + D GL +LT L L
Sbjct: 442 LAHLTPLTGLQHLNLCNCRKFTDNGLAHLTPLSVLQHLNLSRCNKLTDVGLAHLTPLTAL 501
Query: 303 KCLELSD-TQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNL-DARQ 359
+ L+LS + GL HL+ LT+L+ + L S ++D L L L+ L+ LNL + +
Sbjct: 502 QHLDLSSCYNLTDVGLAHLTPLTSLQHLGLISCDKLTDAGLVHLKLLTGLQHLNLSNCKN 561
Query: 360 ITDTGLAALTSLTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEI--CGGGLTDAG---- 412
+TD GLA LT LT L +L L R +TD+G A+L + L+ L++ C LTDAG
Sbjct: 562 LTDAGLAHLTPLTALQYLYLNWCRKLTDAGLAHLTSLTALQHLDLRYC-QNLTDAGLAHL 620
Query: 413 --LTGLVSLNVSN-SRITSAGLRHLKPLKNLRSLTLE 446
LTGL L++S R+T AGL K L SL LE
Sbjct: 621 TPLTGLRHLDLSQCWRLTKAGLARFKTLA--ASLNLE 655
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 213/422 (50%), Gaps = 64/422 (15%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
++D++ +I + + ++L + ++ + LK C NL+ L F C ++D GL HL
Sbjct: 212 LSDEFGRIINHFSNEIKILNLPNKILNNACFLALKSCENLKVLHFKECRHLTDAGLAHLT 271
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNI 162
L+ L L L +C R+ + GL +L L L+ LN+
Sbjct: 272 PLTALQHLG-------------------------LGQCWRLTNAGLAHLTPLTALQYLNL 306
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAAC 220
+TD+ + L+ LT L+ L +S C +TD+G+A+L L L L+L GC +T A
Sbjct: 307 SEYKNLTDAGLAHLTPLTALQHLGLSGCQNLTDAGLAHLTPLMGLQHLDLSGCQNLTDAG 366
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
L L+ L L +LNL+RC N++TD L HL LT L+
Sbjct: 367 LAHLTPLTGLQHLNLSRC-----------------------NKLTDAGLAHLTPLTGLQH 403
Query: 281 LNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQ-VGSSGLRHLSGLTNLESINL-SFTGIS 337
L+L C + D GL +LT L L+ L+LS Q + +GL HL+ LT L+ +NL + +
Sbjct: 404 LDLSGCQNLTDAGLAHLTPLTGLQHLDLSGCQNLTDAGLAHLTPLTGLQHLNLCNCRKFT 463
Query: 338 DGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNF 395
D L L LS L+ LNL ++TD GLA LT LT L HLDL +TD G A+L
Sbjct: 464 DNGLAHLTPLSVLQHLNLSRCNKLTDVGLAHLTPLTALQHLDLSSCYNLTDVGLAHLTPL 523
Query: 396 KNLRSLE-ICGGGLTDAGL------TGLVSLNVSNSR-ITSAGLRHLKPLKNLRSLTLES 447
+L+ L I LTDAGL TGL LN+SN + +T AGL HL PL L+ L L
Sbjct: 524 TSLQHLGLISCDKLTDAGLVHLKLLTGLQHLNLSNCKNLTDAGLAHLTPLTALQYLYLNW 583
Query: 448 CK 449
C+
Sbjct: 584 CR 585
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 135/381 (35%), Positives = 200/381 (52%), Gaps = 33/381 (8%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNF 90
ALQ L L +Y + D + + ++L + LSG ++TD+GL HL LQ LD +
Sbjct: 300 ALQYLNLSEYKNLTDAGLAHLTPL-TALQHLGLSGCQNLTDAGLAHLTPLMGLQHLDLSG 358
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLV 149
C ++D GL HL L+ L L+ R N +T G+ L L LDL C + GL
Sbjct: 359 CQNLTDAGLAHLTPLTGLQHLNLSRCNKLTDAGLAHLTPLTGLQHLDLSGCQNLTDAGLA 418
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTL 208
+L L L+ L++ C +TD+ + L+ LT L+ L + +C K TD+G+A+L L L
Sbjct: 419 HLTPLTGLQHLDLSGCQNLTDAGLAHLTPLTGLQHLNLCNCRKFTDNGLAHLTPLSVLQH 478
Query: 209 LNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNL-GFNEIT 265
LNL C +T L L+ L +L +L+L+ C L+D G + + SL+ L L +++T
Sbjct: 479 LNLSRCNKLTDVGLAHLTPLTALQHLDLSSCYNLTDVGLAHLTPLTSLQHLGLISCDKLT 538
Query: 266 DECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGL 323
D LVHLK LT L+ LNL +C + D GL +LT L L+ L L+ ++ +GL HL+ L
Sbjct: 539 DAGLVHLKLLTGLQHLNLSNCKNLTDAGLAHLTPLTALQYLYLNWCRKLTDAGLAHLTSL 598
Query: 324 TNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA- 382
T L+ ++L + + +TD GLA LT LTGL HLDL
Sbjct: 599 TALQHLDLRY-----------------------CQNLTDAGLAHLTPLTGLRHLDLSQCW 635
Query: 383 RITDSGAAYLRNFKNLRSLEI 403
R+T +G A + +LEI
Sbjct: 636 RLTKAGLARFKTLAASLNLEI 656
>gi|283780172|ref|YP_003370927.1| hypothetical protein Psta_2397 [Pirellula staleyi DSM 6068]
gi|283438625|gb|ADB17067.1| leucine-rich repeat cysteine-containing subtype [Pirellula staleyi
DSM 6068]
Length = 443
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/336 (34%), Positives = 185/336 (55%), Gaps = 26/336 (7%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
VTD+GL +L L+ L ++D G+EHL L L + +R + +T++G ++ A
Sbjct: 107 VTDAGLANLDGHPTLRILVLELS-SVTDAGMEHLTKLPALEDIQLKRCD-LTSKGYESLA 164
Query: 129 GLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
+ L ++ + L +K + +LE L+++ CN +T++ + PL+G+T LKSL+I
Sbjct: 165 KIKTLRRIRAPQTNFNDDCLAAIKDMSQLELLDLQDCNQVTEAGLAPLAGMTKLKSLRIY 224
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
+TD+ + Y+K + L L+LE +A +D + +G L
Sbjct: 225 GPTITDTVMGYIKDCKNLASLSLEQ---SAVGVDGMKVIGGL------------------ 263
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
SK+ LK+ G + +TD+ L + GL +LE L L S +G+V+L G+ LK L+LS
Sbjct: 264 SKLKELKLY--GASNVTDDALAQIAGLKDLEILELRSTTTTSKGMVHLAGMSKLKLLDLS 321
Query: 309 DT-QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAA 367
+T + ++GL L+ LTNLE INL +T + D L LAG++ LK LNLD Q+TD GL
Sbjct: 322 ETANIDNAGLAALAPLTNLEEINLWYTFVDDAGLAPLAGMTKLKRLNLDKCQVTDAGLVH 381
Query: 368 LTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
L L+ L L + R+TD+G A L KNL+ L I
Sbjct: 382 LKGLSNLEFLHIGSTRVTDTGLAELEGLKNLKHLVI 417
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 125/228 (54%), Gaps = 6/228 (2%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+ L S+ + G +TD+ + ++KDC NL SL DG ++ + GLS L L
Sbjct: 216 TKLKSLRIYGPTITDTVMGYIKDCKNLASLSLEQSAVGVDG-MKVIGGLSKLKELKLYGA 274
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+ +T + AGL +L L+L T G+V+L G+ KL+ L++ I ++ + L
Sbjct: 275 SNVTDDALAQIAGLKDLEILELRSTTTTSKGMVHLAGMSKLKLLDLSETANIDNAGLAAL 334
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+ LTNL+ + + + V D+G+A L G+ KL LNL+ C VT A L L L +L +L++
Sbjct: 335 APLTNLEEINLWYTFVDDAGLAPLAGMTKLKRLNLDKCQVTDAGLVHLKGLSNLEFLHIG 394
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLK----GLTNLE 279
+++D G + + +LK L + F N+I+D+ + L+ GLT +E
Sbjct: 395 STRVTDTGLAELEGLKNLKHLVITFCNDISDDGVAKLQAALPGLTKIE 442
>gi|46447588|ref|YP_008953.1| hypothetical protein pc1954 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401229|emb|CAF24678.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 704
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 147/423 (34%), Positives = 227/423 (53%), Gaps = 19/423 (4%)
Query: 51 VIASQGSSLLSVDLSGSD-VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLT 109
+I + +++ S +D +TD+ L+ L++C NL+ L N C I+D GL HL L+ L
Sbjct: 188 IIIPFSKEIEALNFSNNDYLTDAHLLTLRNCENLKVLHLNACQAITDDGLAHLTPLTGLQ 247
Query: 110 SLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCI 168
L R +T G+ L L L+L C + GL +L L L+ L+++ C +
Sbjct: 248 HLDIRVCEYLTDDGLAYLTSLTGLQHLNLSGCYHLTDTGLAHLTPLTGLQHLDLRICEYL 307
Query: 169 TDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTA-ACLDSLSA 226
T + + L L L+ L +S C +T+ G+++L L L L+L C A A L L+
Sbjct: 308 TATGLAHLKPLKALQHLDLSYCKNLTNVGLSHLAPLTALQHLDLSYCWQLADAGLVYLTP 367
Query: 227 LGSLFYLNLN-RCQLSDDGCEKFSKIGSLKVLNLGFNE-ITDECLVHLKGLTNLESLNLD 284
L L +L+L+ +L+D G + + +L+ L+L + E +TD L HL L L+ LNL
Sbjct: 368 LTGLQHLDLSGYHKLTDAGLAHLTPLTALQCLDLSYCENLTDVGLAHLMPLKALQHLNLR 427
Query: 285 SC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSL 341
+C + D+GL +L L L+ L+LS Q+ +GL HL+ LT L+ ++LS+ ++D L
Sbjct: 428 NCRNLTDDGLAHLAPLTALQHLDLSYCWQLTDAGLAHLTPLTGLQRLDLSYCENLTDVGL 487
Query: 342 RKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLR 399
L L +L+ LNL + R +TD GL L LT L HLDL +TD+G A+L L+
Sbjct: 488 AHLIPLKALQHLNLRNCRNLTDDGLVHLAPLTALQHLDLSDCNNLTDAGLAHLTPLTALQ 547
Query: 400 SLE------ICGGGLTD-AGLTGLVSLNVSNSR-ITSAGLRHLKPLKNLRSLTLESCKVT 451
L+ + G GL A LTGL L++S + + AGL HLK L L+ L L C+
Sbjct: 548 HLDLKYCINLTGAGLAHLAFLTGLQYLDLSWCKNLIDAGLVHLKLLTALQYLGLSYCENL 607
Query: 452 AND 454
+D
Sbjct: 608 TDD 610
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 139/404 (34%), Positives = 213/404 (52%), Gaps = 28/404 (6%)
Query: 57 SSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
+ L ++LSG +TD+GL HL + LQ LD C ++ GL HL+ L L L
Sbjct: 269 TGLQHLNLSGCYHLTDTGLAHLTPLTGLQHLDLRICEYLTATGLAHLKPLKALQHLDLSY 328
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
+T G+ A L L LDL C ++ GLV L L L+ L++ + +TD+ +
Sbjct: 329 CKNLTNVGLSHLAPLTALQHLDLSYCWQLADAGLVYLTPLTGLQHLDLSGYHKLTDAGLA 388
Query: 175 PLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFY 232
L+ LT L+ L +S C +TD G+A+L L+ L LNL C +T L L+ L +L +
Sbjct: 389 HLTPLTALQCLDLSYCENLTDVGLAHLMPLKALQHLNLRNCRNLTDDGLAHLAPLTALQH 448
Query: 233 LNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNE-ITDECLVHLKGLTNLESLNLDSC-GIG 289
L+L+ C QL+D G + + L+ L+L + E +TD L HL L L+ LNL +C +
Sbjct: 449 LDLSYCWQLTDAGLAHLTPLTGLQRLDLSYCENLTDVGLAHLIPLKALQHLNLRNCRNLT 508
Query: 290 DEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGL 347
D+GLV+L L L+ L+LSD + +GL HL+ LT L+ ++L + ++ L LA L
Sbjct: 509 DDGLVHLAPLTALQHLDLSDCNNLTDAGLAHLTPLTALQHLDLKYCINLTGAGLAHLAFL 568
Query: 348 SSLKSLNLD-ARQITDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG 405
+ L+ L+L + + D GL L LT L +L L + +TD G A+LR+ L+ L +
Sbjct: 569 TGLQYLDLSWCKNLIDAGLVHLKLLTALQYLGLSYCENLTDDGLAHLRSLTALQHLAL-- 626
Query: 406 GGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
+ +T AGL HL+ L +L+ L L C+
Sbjct: 627 ---------------IHYKNLTDAGLVHLRSLTSLQHLDLRYCQ 655
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 139/382 (36%), Positives = 206/382 (53%), Gaps = 13/382 (3%)
Query: 58 SLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+L +DLS ++T+ GL HL + LQ LD ++C Q++D GL +L L+ L L
Sbjct: 320 ALQHLDLSYCKNLTNVGLSHLAPLTALQHLDLSYCWQLADAGLVYLTPLTGLQHLDLSGY 379
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+ +T G+ L L LDL C + GL +L L L+ LN++ C +TD +
Sbjct: 380 HKLTDAGLAHLTPLTALQCLDLSYCENLTDVGLAHLMPLKALQHLNLRNCRNLTDDGLAH 439
Query: 176 LSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYL 233
L+ LT L+ L +S C ++TD+G+A+L L L L+L C +T L L L +L +L
Sbjct: 440 LAPLTALQHLDLSYCWQLTDAGLAHLTPLTGLQRLDLSYCENLTDVGLAHLIPLKALQHL 499
Query: 234 NLNRCQ-LSDDGCEKFSKIGSLKVLNLG-FNEITDECLVHLKGLTNLESLNLDSC-GIGD 290
NL C+ L+DDG + + +L+ L+L N +TD L HL LT L+ L+L C +
Sbjct: 500 NLRNCRNLTDDGLVHLAPLTALQHLDLSDCNNLTDAGLAHLTPLTALQHLDLKYCINLTG 559
Query: 291 EGLVNLTGLCNLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLS 348
GL +L L L+ L+LS + + +GL HL LT L+ + LS+ ++D L L L+
Sbjct: 560 AGLAHLAFLTGLQYLDLSWCKNLIDAGLVHLKLLTALQYLGLSYCENLTDDGLAHLRSLT 619
Query: 349 SLKSLNL-DARQITDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG- 405
+L+ L L + +TD GL L SLT L HLDL + +T G A+LR L+ L +
Sbjct: 620 ALQHLALIHYKNLTDAGLVHLRSLTSLQHLDLRYCQNLTGDGLAHLRTLTALQYLALTQY 679
Query: 406 GGLTDAGLTGLVSLNVS-NSRI 426
LTD GL +L S N RI
Sbjct: 680 KNLTDDGLARFKTLASSTNLRI 701
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 126/376 (33%), Positives = 193/376 (51%), Gaps = 12/376 (3%)
Query: 13 ELVYSRCLTEVSLEAFRD-CALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVT 70
+L Y + LT V L ALQ L L + D + V + + L +DLSG +T
Sbjct: 325 DLSYCKNLTNVGLSHLAPLTALQHLDLSYCWQLADAGL-VYLTPLTGLQHLDLSGYHKLT 383
Query: 71 DSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGL 130
D+GL HL + LQ LD ++C ++D GL HL L L L+ R +T G+ A L
Sbjct: 384 DAGLAHLTPLTALQCLDLSYCENLTDVGLAHLMPLKALQHLNLRNCRNLTDDGLAHLAPL 443
Query: 131 INLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-S 188
L LDL C ++ GL +L L L+ L++ +C +TD + L L L+ L + +
Sbjct: 444 TALQHLDLSYCWQLTDAGLAHLTPLTGLQRLDLSYCENLTDVGLAHLIPLKALQHLNLRN 503
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCE 246
C +TD G+ +L L L L+L C +T A L L+ L +L +L+L C L+ G
Sbjct: 504 CRNLTDDGLVHLAPLTALQHLDLSDCNNLTDAGLAHLTPLTALQHLDLKYCINLTGAGLA 563
Query: 247 KFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKC 304
+ + L+ L+L + + D LVHLK LT L+ L L C + D+GL +L L L+
Sbjct: 564 HLAFLTGLQYLDLSWCKNLIDAGLVHLKLLTALQYLGLSYCENLTDDGLAHLRSLTALQH 623
Query: 305 LELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL-DARQIT 361
L L + + +GL HL LT+L+ ++L + ++ L L L++L+ L L + +T
Sbjct: 624 LALIHYKNLTDAGLVHLRSLTSLQHLDLRYCQNLTGDGLAHLRTLTALQYLALTQYKNLT 683
Query: 362 DTGLAALTSLTGLTHL 377
D GLA +L T+L
Sbjct: 684 DDGLARFKTLASSTNL 699
>gi|46447250|ref|YP_008615.1| hypothetical protein pc1616 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400891|emb|CAF24340.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 813
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 158/426 (37%), Positives = 229/426 (53%), Gaps = 25/426 (5%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGS-DVTDSGLIHLKDCSNLQSLDFNF 90
ALQ L L + + D + ++S ++L +DLS S + TD+GL HL +LQ LD +
Sbjct: 379 ALQHLDLSECYLLKDTGLAHLSSL-TALQYLDLSDSGNFTDAGLAHLTPLVSLQHLDLSK 437
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLV 149
++ GL HL L L L +T G+ L+ L LDL C + GLV
Sbjct: 438 SENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLVALRHLDLSECKNLTDDGLV 497
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-----CSKVTDSGIAYLKGLQ 204
+L L+ L+ L++K C +TD+ + L+ LT L+ L + C +TD G+A+L L
Sbjct: 498 HLSSLVALQYLSLKLCENLTDAGLAHLTPLTTLEHLDLGLDLGCCHNLTDDGLAHLSSLT 557
Query: 205 KLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGFN 262
L L+L +T A L L+ L +L +L+L+ C+ L+D+G + + +L+ L+L +
Sbjct: 558 ALKHLDLSWRENLTDAGLAHLTPLTALRHLDLSWCENLTDEGLAYLTPLVALQYLSLKGS 617
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHL 320
+ITDE L HL L+ L L+L+ C I GL +LT L NL+ L+LS + S L +L
Sbjct: 618 DITDEGLEHLAHLSALRHLSLNDCRRINGYGLAHLTSLVNLEHLDLSGCYHLPSFQLIYL 677
Query: 321 SGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTG--LTH 376
S L NL+ +NLS G+ L L L +L+ L+L +TD GLA LTSL G L H
Sbjct: 678 SSLVNLQHLNLSECFGLCHDGLEDLTPLMNLQYLDLSGCINLTDQGLAYLTSLVGLDLQH 737
Query: 377 LDLFG-ARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGLVSL-NVSN------SRIT 427
LDL G +ITD+G A+L + L+ L + LTD GL LVSL N+ IT
Sbjct: 738 LDLSGCKKITDTGLAHLTSLVTLQHLNLSECVNLTDTGLAHLVSLVNLQYLELRECKNIT 797
Query: 428 SAGLRH 433
AGL H
Sbjct: 798 DAGLAH 803
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 148/427 (34%), Positives = 210/427 (49%), Gaps = 48/427 (11%)
Query: 71 DSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGL 130
D+GL HL + LQ LD + C + D GL HL L+ L L + T G+ L
Sbjct: 368 DTGLAHLTSLTALQHLDLSECYLLKDTGLAHLSSLTALQYLDLSDSGNFTDAGLAHLTPL 427
Query: 131 INLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS- 188
++L LDL + + G GL +L L+ L L + C +TD+ + L+ L L+ L +S
Sbjct: 428 VSLQHLDLSKSENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLVALRHLDLSE 487
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNR----CQ-LSD 242
C +TD G+ +L L L L+L+ C +T A L L+ L +L +L+L C L+D
Sbjct: 488 CKNLTDDGLVHLSSLVALQYLSLKLCENLTDAGLAHLTPLTTLEHLDLGLDLGCCHNLTD 547
Query: 243 DGCEKFSKIGSLKVLNLGFNE-ITDECLVHLKGLTNLESLNLDSC--------------- 286
DG S + +LK L+L + E +TD L HL LT L L+L C
Sbjct: 548 DGLAHLSSLTALKHLDLSWRENLTDAGLAHLTPLTALRHLDLSWCENLTDEGLAYLTPLV 607
Query: 287 ----------GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLS-FT 334
I DEGL +L L L+ L L+D ++ GL HL+ L NLE ++LS
Sbjct: 608 ALQYLSLKGSDITDEGLEHLAHLSALRHLSLNDCRRINGYGLAHLTSLVNLEHLDLSGCY 667
Query: 335 GISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYL 392
+ L L+ L +L+ LNL + + GL LT L L +LDL G +TD G AYL
Sbjct: 668 HLPSFQLIYLSSLVNLQHLNLSECFGLCHDGLEDLTPLMNLQYLDLSGCINLTDQGLAYL 727
Query: 393 RNFK--NLRSLEICG-GGLTDAGLTGLVS------LNVSN-SRITSAGLRHLKPLKNLRS 442
+ +L+ L++ G +TD GL L S LN+S +T GL HL L NL+
Sbjct: 728 TSLVGLDLQHLDLSGCKKITDTGLAHLTSLVTLQHLNLSECVNLTDTGLAHLVSLVNLQY 787
Query: 443 LTLESCK 449
L L CK
Sbjct: 788 LELRECK 794
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 188/343 (54%), Gaps = 16/343 (4%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
++TD+GL HL L+ LD + C ++D GL HL L L LS + +T G+
Sbjct: 465 NLTDAGLAHLTPLVALRHLDLSECKNLTDDGLVHLSSLVALQYLSLKLCENLTDAGLAHL 524
Query: 128 AGLINLVKLDLER----CTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNL 182
L L LDL C + GL +L L L+ L++ W +TD+ + L+ LT L
Sbjct: 525 TPLTTLEHLDLGLDLGCCHNLTDDGLAHLSSLTALKHLDLSWRENLTDAGLAHLTPLTAL 584
Query: 183 KSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC-QL 240
+ L +S C +TD G+AYL L L L+L+G +T L+ L+ L +L +L+LN C ++
Sbjct: 585 RHLDLSWCENLTDEGLAYLTPLVALQYLSLKGSDITDEGLEHLAHLSALRHLSLNDCRRI 644
Query: 241 SDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTG 298
+ G + + +L+ L+L G + L++L L NL+ LNL C G+ +GL +LT
Sbjct: 645 NGYGLAHLTSLVNLEHLDLSGCYHLPSFQLIYLSSLVNLQHLNLSECFGLCHDGLEDLTP 704
Query: 299 LCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFTG---ISDGSLRKLAGLSSLKSLN 354
L NL+ L+LS + GL +L+ L L+ +L +G I+D L L L +L+ LN
Sbjct: 705 LMNLQYLDLSGCINLTDQGLAYLTSLVGLDLQHLDLSGCKKITDTGLAHLTSLVTLQHLN 764
Query: 355 L-DARQITDTGLAALTSLTGLTHLDLFGAR-ITDSG-AAYLRN 394
L + +TDTGLA L SL L +L+L + ITD+G A Y++N
Sbjct: 765 LSECVNLTDTGLAHLVSLVNLQYLELRECKNITDAGLAHYIQN 807
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 90/183 (49%), Gaps = 24/183 (13%)
Query: 278 LESLNLDSCGIGDEG-LVNLTGLCNLK--CLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
+E LNL E + L NLK CL++ T + +GL HL+ LT L+ ++LS
Sbjct: 330 IEGLNLSGKDFFTEAHFLALKNCKNLKVLCLKIFYTPI-DTGLAHLTSLTALQHLDLSEC 388
Query: 335 GI-SDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGAR-ITDSGAAY 391
+ D L L+ L++L+ L+L D+ TD GLA LT L L HLDL + +T G A+
Sbjct: 389 YLLKDTGLAHLSSLTALQYLDLSDSGNFTDAGLAHLTPLVSLQHLDLSKSENLTGDGLAH 448
Query: 392 LRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
L LR L GL+D +T AGL HL PL LR L L CK
Sbjct: 449 LTPLVALRHL-----GLSDC------------RNLTDAGLAHLTPLVALRHLDLSECKNL 491
Query: 452 AND 454
+D
Sbjct: 492 TDD 494
>gi|348682865|gb|EGZ22681.1| hypothetical protein PHYSODRAFT_491927 [Phytophthora sojae]
Length = 648
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 149/516 (28%), Positives = 235/516 (45%), Gaps = 58/516 (11%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMD-VIASQGSSLL 60
LP +++ + L L + +A L + L GV D W D V + L
Sbjct: 142 LPPELAASVLQWLKRHYVLDKPQFQALAPFLLLEWSLADLQGVEDSWFDGVPQTTLQQLK 201
Query: 61 SVDLSGSDVTDSGLIHLKDC-----------SNLQSLDFNFCIQISDGGLEHLRGLSNLT 109
S+D+SG IHL L + F C ++ +E LR + L
Sbjct: 202 SIDVSGC-------IHLHQLGAEWGYATTKLPELLAASFQGCTGLTKESIEMLRFSTKLA 254
Query: 110 SLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCI 168
+L+ + + +KA + L L L L C ++ G+ L + KLE L I C +
Sbjct: 255 ALNLSGCVNVDDKSLKALSELEQLTSLQLVGCRKLTDKGVKYLAKMAKLEKLRIARCRKL 314
Query: 169 TDSDMKPLSGL-TNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSA 226
TD+ ++ + + L+ L ++ ++++ + Y+ ++ L +L + GC + + SLS
Sbjct: 315 TDAALEDFAMMFPKLRELDVANCRLSEKALQYIGQIKSLEVLVIRGCQDICDDGMSSLSG 374
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC 286
L +L Y + C ++++ L+VL LG+ + L+ LTNL L L C
Sbjct: 375 LANLKYFDARHCSKIHSIPTEWTQ---LEVLLLGYTAFAESDAAVLQYLTNLHELELRKC 431
Query: 287 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL-SGLTNLESINLSFTGISDGSLRKLA 345
I G ++ L +L+ LEL +T + SGL + + +L+++N+S T ISD LA
Sbjct: 432 RIMKRGFQFISRLTHLERLELGETALTDSGLLEICNSAKSLKALNISNTEISDNGAAGLA 491
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
L L+ L LD IT+ LA L+ L L LDLFGA ITD+G +L L+ L ICG
Sbjct: 492 KLKELRILRLDTPGITNRALANLSFLARLERLDLFGANITDNGLMHLVPLHKLQELSICG 551
Query: 406 GGLTDAG-------------------------------LTGLVSLNVSNSRITSAGLRHL 434
G + D G LTGL LN+SN+ I++ LRHL
Sbjct: 552 GNIGDRGVGLISKLTSLTSLNLSQNRNIRTKSLFYLRALTGLRCLNLSNTGISALSLRHL 611
Query: 435 KPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFR 470
LK L+SL++ C ++ I L+ LP L R
Sbjct: 612 SSLKELQSLSVYGCSLSQGHIDVLRE-ILPELKCLR 646
>gi|168701673|ref|ZP_02733950.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 367
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/300 (37%), Positives = 171/300 (57%), Gaps = 3/300 (1%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
+++D GL+ L GL NLT L+ + +T G+K AGL L LDL + G+ L
Sbjct: 60 RVTDKGLKELAGLKNLTHLNL-FSTWVTDAGVKELAGLKGLTTLDLNSTSVTDAGMKELA 118
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
L L +L + +TD+ +K L+ L L +L +S +KVTD+G+ L L+ LT + L
Sbjct: 119 ALNNLTTLRLSG-KGVTDAGLKELAALKKLANLDLSHTKVTDAGLKELAALKGLTTIRLN 177
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
VT A L L+AL L L+L++ +++D G ++ + + L L L ++TD L L
Sbjct: 178 NTEVTDAGLKELAALKKLADLDLSQTKVTDAGLKELAALKGLTCLGLLGTKVTDAGLKEL 237
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
GL NL L+L + D GL L L NL L L T+V GL+ LSGL L ++ L+
Sbjct: 238 AGL-NLTDLHLAGTPVTDAGLKELAALKNLTHLYLFGTKVTGVGLKELSGLKGLTTLYLN 296
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
T ++D +++L+GL L +L+L ++TD G+ AL L GLT+L+L+G ++TD+G L
Sbjct: 297 NTKVTDAGVKELSGLKGLTTLDLSYTEMTDAGVKALAGLKGLTNLELYGTKVTDAGVKEL 356
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 168/304 (55%), Gaps = 8/304 (2%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
+TD +K L+GL NL L + + VTD+G+ L GL+ LT L+L VT A + L+AL
Sbjct: 61 VTDKGLKELAGLKNLTHLNLFSTWVTDAGVKELAGLKGLTTLDLNSTSVTDAGMKELAAL 120
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
+L L L+ ++D G ++ + + L L+L ++TD L L L L ++ L++
Sbjct: 121 NNLTTLRLSGKGVTDAGLKELAALKKLANLDLSHTKVTDAGLKELAALKGLTTIRLNNTE 180
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
+ D GL L L L L+LS T+V +GL+ L+ L L + L T ++D L++LAGL
Sbjct: 181 VTDAGLKELAALKKLADLDLSQTKVTDAGLKELAALKGLTCLGLLGTKVTDAGLKELAGL 240
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGG 407
+L L+L +TD GL L +L LTHL LFG ++T G L K L +L +
Sbjct: 241 -NLTDLHLAGTPVTDAGLKELAALKNLTHLYLFGTKVTGVGLKELSGLKGLTTLYLNNTK 299
Query: 408 LTDA------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSR 461
+TDA GL GL +L++S + +T AG++ L LK L +L L KVT +K L S
Sbjct: 300 VTDAGVKELSGLKGLTTLDLSYTEMTDAGVKALAGLKGLTNLELYGTKVTDAGVKELNSA 359
Query: 462 DLPN 465
LP
Sbjct: 360 -LPK 362
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 167/303 (55%), Gaps = 5/303 (1%)
Query: 111 LSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITD 170
LSF R +T +G+K AGL NL L+L G+ L GL L +L++ +TD
Sbjct: 56 LSFTR---VTDKGLKELAGLKNLTHLNLFSTWVTDAGVKELAGLKGLTTLDLN-STSVTD 111
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
+ MK L+ L NL +L++S VTD+G+ L L+KL L+L VT A L L+AL L
Sbjct: 112 AGMKELAALNNLTTLRLSGKGVTDAGLKELAALKKLANLDLSHTKVTDAGLKELAALKGL 171
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
+ LN +++D G ++ + + L L+L ++TD L L L L L L + D
Sbjct: 172 TTIRLNNTEVTDAGLKELAALKKLADLDLSQTKVTDAGLKELAALKGLTCLGLLGTKVTD 231
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
GL L GL NL L L+ T V +GL+ L+ L NL + L T ++ L++L+GL L
Sbjct: 232 AGLKELAGL-NLTDLHLAGTPVTDAGLKELAALKNLTHLYLFGTKVTGVGLKELSGLKGL 290
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
+L L+ ++TD G+ L+ L GLT LDL +TD+G L K L +LE+ G +TD
Sbjct: 291 TTLYLNNTKVTDAGVKELSGLKGLTTLDLSYTEMTDAGVKALAGLKGLTNLELYGTKVTD 350
Query: 411 AGL 413
AG+
Sbjct: 351 AGV 353
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 8/289 (2%)
Query: 185 LQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
+ +S ++VTD G+ L GL+ LT LNL VT A + L+ L L L+LN ++D G
Sbjct: 54 VYLSFTRVTDKGLKELAGLKNLTHLNLFSTWVTDAGVKELAGLKGLTTLDLNSTSVTDAG 113
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
++ + + +L L L +TD L L L L +L+L + D GL L L L
Sbjct: 114 MKELAALNNLTTLRLSGKGVTDAGLKELAALKKLANLDLSHTKVTDAGLKELAALKGLTT 173
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 364
+ L++T+V +GL+ L+ L L ++LS T ++D L++LA L L L L ++TD G
Sbjct: 174 IRLNNTEVTDAGLKELAALKKLADLDLSQTKVTDAGLKELAALKGLTCLGLLGTKVTDAG 233
Query: 365 LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL-----EICGGGLTD-AGLTGLVS 418
L L L LT L L G +TD+G L KNL L ++ G GL + +GL GL +
Sbjct: 234 LKELAGLN-LTDLHLAGTPVTDAGLKELAALKNLTHLYLFGTKVTGVGLKELSGLKGLTT 292
Query: 419 LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS-RDLPNL 466
L ++N+++T AG++ L LK L +L L ++T +K L + L NL
Sbjct: 293 LYLNNTKVTDAGVKELSGLKGLTTLDLSYTEMTDAGVKALAGLKGLTNL 341
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 162/330 (49%), Gaps = 29/330 (8%)
Query: 41 YPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLE 100
+ V DK + +A +L ++L + VTD+G+ L L +LD N ++D G++
Sbjct: 58 FTRVTDKGLKELAGL-KNLTHLNLFSTWVTDAGVKELAGLKGLTTLDLN-STSVTDAGMK 115
Query: 101 HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL 160
L L+NLT+L +T G+K A L L LDL GL L L L ++
Sbjct: 116 ELAALNNLTTLRL-SGKGVTDAGLKELAALKKLANLDLSHTKVTDAGLKELAALKGLTTI 174
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC 220
+ +TD+ +K L+ L L L +S +KVTD+G+ L L+ LT L L G VT A
Sbjct: 175 RLNNTE-VTDAGLKELAALKKLADLDLSQTKVTDAGLKELAALKGLTCLGLLGTKVTDAG 233
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
L L+ L L+D L+L +TD L L L NL
Sbjct: 234 LKELAGL-----------NLTD--------------LHLAGTPVTDAGLKELAALKNLTH 268
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
L L + GL L+GL L L L++T+V +G++ LSGL L +++LS+T ++D
Sbjct: 269 LYLFGTKVTGVGLKELSGLKGLTTLYLNNTKVTDAGVKELSGLKGLTTLDLSYTEMTDAG 328
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTS 370
++ LAGL L +L L ++TD G+ L S
Sbjct: 329 VKALAGLKGLTNLELYGTKVTDAGVKELNS 358
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 40/217 (18%)
Query: 5 DISQQIFNELVYSRCLTEVSLEAFR--DCALQDL-------CLGQY-PGVNDKWMDVIAS 54
+++ EL + L ++ L + D L++L CLG V D + +A
Sbjct: 180 EVTDAGLKELAALKKLADLDLSQTKVTDAGLKELAALKGLTCLGLLGTKVTDAGLKELA- 238
Query: 55 QGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
G +L + L+G+ VTD+GL L NL L + F +++ GL+ L GL LT+L +
Sbjct: 239 -GLNLTDLHLAGTPVTDAGLKELAALKNLTHL-YLFGTKVTGVGLKELSGLKGLTTL-YL 295
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N +T G+K +GL L LDL +TD+ +K
Sbjct: 296 NNTKVTDAGVKELSGLKGLTTLDLSYTE-------------------------MTDAGVK 330
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYL-KGLQKLTLLN 210
L+GL L +L++ +KVTD+G+ L L K +LN
Sbjct: 331 ALAGLKGLTNLELYGTKVTDAGVKELNSALPKCKILN 367
>gi|149175912|ref|ZP_01854530.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148845359|gb|EDL59704.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 495
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 117/332 (35%), Positives = 184/332 (55%), Gaps = 15/332 (4%)
Query: 148 LVNLKGLMKLESLNIKWC--NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
LV++ L ++ SL W ITD + L L L+SL I+ ++++D+GI L + K
Sbjct: 69 LVHVSKLTEVTSL---WIIGTEITDQGLTLLRDLQGLQSLYITNNQISDAGIQQLPQV-K 124
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
L L L G +T L S L LN+ + +SD G + S+ L+ L L +IT
Sbjct: 125 LVELTLGGTKITDESLKHFSNSSDLNTLNVGKTAVSDRGLQYVSQFKKLERLYLHETQIT 184
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
DE + ++GL NL+SL L+ I D GL L L L+ L L++T++ +GL+ L LT
Sbjct: 185 DEGMQQIQGLKNLKSLMLNETEITDSGLTALRNLDQLEELFLNETKITGAGLKKLERLTR 244
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L + LS T I+D ++ L L +LK L LD Q+TD GL+ + L LD+ +IT
Sbjct: 245 LSKLILSETDITDADIKYLKELPALKRLYLDQTQLTDDGLSQIVDFPSLEMLDVSNNQIT 304
Query: 386 DSGAAY-LRNFKNLRSLEICGGGLTDAGLTGL------VSLNVSNSRITSAGLRHLKPLK 438
D+G Y L+N K S+ + G +TDAGL+ L ++L++SN+ +T AGL++L +
Sbjct: 305 DAGLIYLLQNGKQWSSINLSGNQITDAGLSILGKSHIELTLDLSNTEVTDAGLKYLTSMN 364
Query: 439 NLRSLTLESCKVTANDIKRLQSRDLPNLVSFR 470
L L+L +C+++ ++ L +LP L S +
Sbjct: 365 MLFGLSLNNCQISDQGVQTLM--ELPALKSIQ 394
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 133/433 (30%), Positives = 223/433 (51%), Gaps = 19/433 (4%)
Query: 36 LCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQIS 95
+ L + P V+D + V S+ + + S+ + G+++TD GL L+D LQSL + QIS
Sbjct: 57 VMLNEIP-VDDSIL-VHVSKLTEVTSLWIIGTEITDQGLTLLRDLQGLQSL-YITNNQIS 113
Query: 96 DGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLM 155
D G++ L + L L+ IT + +K F+ +L L++ + GL +
Sbjct: 114 DAGIQQLPQVK-LVELTLG-GTKITDESLKHFSNSSDLNTLNVGKTAVSDRGLQYVSQFK 171
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 215
KLE L + ITD M+ + GL NLKSL ++ +++TDSG+ L+ L +L L L
Sbjct: 172 KLERLYLHETQ-ITDEGMQQIQGLKNLKSLMLNETEITDSGLTALRNLDQLEELFLNETK 230
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
+T A L L L L L L+ ++D + ++ +LK L L ++TD+ L +
Sbjct: 231 ITGAGLKKLERLTRLSKLILSETDITDADIKYLKELPALKRLYLDQTQLTDDGLSQIVDF 290
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSGLTNLE-SINL 331
+LE L++ + I D GL+ L L N K + LS Q+ +GL L G +++E +++L
Sbjct: 291 PSLEMLDVSNNQITDAGLIYL--LQNGKQWSSINLSGNQITDAGLSIL-GKSHIELTLDL 347
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
S T ++D L+ L ++ L L+L+ QI+D G+ L L L + L G ITD
Sbjct: 348 SNTEVTDAGLKYLTSMNMLFGLSLNNCQISDQGVQTLMELPALKSIQLNGTDITDCSLEI 407
Query: 392 LRNFKNLRSLEICGGGLTDAGL------TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
++ ++ L + LTDAG TGL L+++N+ +T A L+ + L L L
Sbjct: 408 IKTKSDMLVLYLDDTKLTDAGFSQLQGLTGLQILSLNNTAVTDASLKFFNKMTKLFELNL 467
Query: 446 ESCKVTANDIKRL 458
+ V+ +++L
Sbjct: 468 KQTAVSDAAVQKL 480
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 179/361 (49%), Gaps = 6/361 (1%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L+ + L G+ +TD L H + S+L +L+ +SD GL+++ L L +
Sbjct: 125 LVELTLGGTKITDESLKHFSNSSDLNTLNVGKT-AVSDRGLQYVSQFKKLERL-YLHETQ 182
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
IT +GM+ GL NL L L GL L+ L +LE L + IT + +K L
Sbjct: 183 ITDEGMQQIQGLKNLKSLMLNETEITDSGLTALRNLDQLEELFLNETK-ITGAGLKKLER 241
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
LT L L +S + +TD+ I YLK L L L L+ +T L + SL L+++
Sbjct: 242 LTRLSKLILSETDITDADIKYLKELPALKRLYLDQTQLTDDGLSQIVDFPSLEMLDVSNN 301
Query: 239 QLSDDGCEKFSKIG-SLKVLNLGFNEITDECLVHLKGLTNLE-SLNLDSCGIGDEGLVNL 296
Q++D G + G +NL N+ITD L L G +++E +L+L + + D GL L
Sbjct: 302 QITDAGLIYLLQNGKQWSSINLSGNQITDAGLSIL-GKSHIELTLDLSNTEVTDAGLKYL 360
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
T + L L L++ Q+ G++ L L L+SI L+ T I+D SL + S + L LD
Sbjct: 361 TSMNMLFGLSLNNCQISDQGVQTLMELPALKSIQLNGTDITDCSLEIIKTKSDMLVLYLD 420
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL 416
++TD G + L LTGL L L +TD+ + L L + ++DA + L
Sbjct: 421 DTKLTDAGFSQLQGLTGLQILSLNNTAVTDASLKFFNKMTKLFELNLKQTAVSDAAVQKL 480
Query: 417 V 417
+
Sbjct: 481 L 481
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 171/352 (48%), Gaps = 33/352 (9%)
Query: 20 LTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLK 78
+T+ SL+ F + + L L +G+ V+D+ + + SQ L + L + +TD G+ ++
Sbjct: 135 ITDESLKHFSNSSDLNTLNVGK-TAVSDRGLQYV-SQFKKLERLYLHETQITDEGMQQIQ 192
Query: 79 DCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL 138
NL+SL N +I+D GL LR L L L F IT G+K L L KL L
Sbjct: 193 GLKNLKSLMLNET-EITDSGLTALRNLDQLEEL-FLNETKITGAGLKKLERLTRLSKLIL 250
Query: 139 ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIA 198
+ LK L L+ L + +TD + + +L+ L +S +++TD+G+
Sbjct: 251 SETDITDADIKYLKELPALKRLYLDQTQ-LTDDGLSQIVDFPSLEMLDVSNNQITDAGLI 309
Query: 199 YL--------------------------KGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
YL K +LTL +L VT A L L+++ LF
Sbjct: 310 YLLQNGKQWSSINLSGNQITDAGLSILGKSHIELTL-DLSNTEVTDAGLKYLTSMNMLFG 368
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L+LN CQ+SD G + ++ +LK + L +ITD L +K +++ L LD + D G
Sbjct: 369 LSLNNCQISDQGVQTLMELPALKSIQLNGTDITDCSLEIIKTKSDMLVLYLDDTKLTDAG 428
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
L GL L+ L L++T V + L+ + +T L +NL T +SD +++KL
Sbjct: 429 FSQLQGLTGLQILSLNNTAVTDASLKFFNKMTKLFELNLKQTAVSDAAVQKL 480
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 174/352 (49%), Gaps = 5/352 (1%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S S L ++++ + V+D GL ++ L+ L + QI+D G++ ++GL NL SL
Sbjct: 144 SNSSDLNTLNVGKTAVSDRGLQYVSQFKKLERL-YLHETQITDEGMQQIQGLKNLKSLML 202
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
IT G+ A L L +L L GL L+ L +L L + + ITD+D+
Sbjct: 203 NETE-ITDSGLTALRNLDQLEELFLNETKITGAGLKKLERLTRLSKLILSETD-ITDADI 260
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY- 232
K L L LK L + +++TD G++ + L +L++ +T A L L G +
Sbjct: 261 KYLKELPALKRLYLDQTQLTDDGLSQIVDFPSLEMLDVSNNQITDAGLIYLLQNGKQWSS 320
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
+NL+ Q++D G K L+L E+TD L +L + L L+L++C I D+G
Sbjct: 321 INLSGNQITDAGLSILGKSHIELTLDLSNTEVTDAGLKYLTSMNMLFGLSLNNCQISDQG 380
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
+ L L LK ++L+ T + L + +++ + L T ++D +L GL+ L+
Sbjct: 381 VQTLMELPALKSIQLNGTDITDCSLEIIKTKSDMLVLYLDDTKLTDAGFSQLQGLTGLQI 440
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
L+L+ +TD L +T L L+L ++D+ L N ++ +IC
Sbjct: 441 LSLNNTAVTDASLKFFNKMTKLFELNLKQTAVSDAAVQKLLKKIN-KTEQIC 491
>gi|168698219|ref|ZP_02730496.1| hypothetical protein GobsU_01767 [Gemmata obscuriglobus UQM 2246]
Length = 380
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 163/298 (54%), Gaps = 6/298 (2%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
+TD ++K L L +L S+ +S + VT++G+ L + LT L+L +T A L L+ L
Sbjct: 60 VTDEELKELLPLKSLTSIDLSHTGVTNAGLKVLVAFKSLTTLSLHDTGITDAGLKELAPL 119
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
+L NL+ +++D G ++ + I +L L+L EITD L L + +L +L+L
Sbjct: 120 KNLTAFNLSNTKVTDTGLKELTAIRNLTALHLRKTEITDAGLKSLPPMKDLTTLDLSDTK 179
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
+ D GL L L L L L +T+V +GL+ L+ NL + L T ++D L++LA L
Sbjct: 180 VTDAGLKALAPLERLTNLYLYNTEVTDTGLKELAPSKNLAVLLLYNTKVTDAGLKELAPL 239
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGG 407
SL L L ++TD GL L L LT L+L+G ++TD+G L F+NL L++ G
Sbjct: 240 KSLSVLVLGETEVTDAGLKELAPLKNLTALNLYGTKVTDAGVKELAPFQNLTLLDLSGTN 299
Query: 408 LTDAGL------TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
+TDAG+ L L +S++ +T GL+ L LK L L L S K T IK Q
Sbjct: 300 VTDAGIKELARFKNLAHLELSSTAVTDVGLKELASLKKLTKLFLISTKTTFAGIKEFQ 357
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 154/308 (50%), Gaps = 27/308 (8%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
SL S+DLS + VT++GL L +L +L + I+D GL+ L L NLT+ + N
Sbjct: 73 SLTSIDLSHTGVTNAGLKVLVAFKSLTTLSLHDT-GITDAGLKELAPLKNLTAFNL-SNT 130
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS 177
+T G+K + NL L L + ITD+ +K L
Sbjct: 131 KVTDTGLKELTAIRNLTALHLRKTE-------------------------ITDAGLKSLP 165
Query: 178 GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
+ +L +L +S +KVTD+G+ L L++LT L L VT L L+ +L L L
Sbjct: 166 PMKDLTTLDLSDTKVTDAGLKALAPLERLTNLYLYNTEVTDTGLKELAPSKNLAVLLLYN 225
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
+++D G ++ + + SL VL LG E+TD L L L NL +LNL + D G+ L
Sbjct: 226 TKVTDAGLKELAPLKSLSVLVLGETEVTDAGLKELAPLKNLTALNLYGTKVTDAGVKELA 285
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA 357
NL L+LS T V +G++ L+ NL + LS T ++D L++LA L L L L +
Sbjct: 286 PFQNLTLLDLSGTNVTDAGIKELARFKNLAHLELSSTAVTDVGLKELASLKKLTKLFLIS 345
Query: 358 RQITDTGL 365
+ T G+
Sbjct: 346 TKTTFAGI 353
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 130/253 (51%), Gaps = 6/253 (2%)
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH 271
+G VT L L L SL ++L+ +++ G + SL L+L ITD L
Sbjct: 56 QGHRVTDEELKELLPLKSLTSIDLSHTGVTNAGLKVLVAFKSLTTLSLHDTGITDAGLKE 115
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
L L NL + NL + + D GL LT + NL L L T++ +GL+ L + +L +++L
Sbjct: 116 LAPLKNLTAFNLSNTKVTDTGLKELTAIRNLTALHLRKTEITDAGLKSLPPMKDLTTLDL 175
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
S T ++D L+ LA L L +L L ++TDTGL L L L L+ ++TD+G
Sbjct: 176 SDTKVTDAGLKALAPLERLTNLYLYNTEVTDTGLKELAPSKNLAVLLLYNTKVTDAGLKE 235
Query: 392 LRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
L K+L L + +TDAG L L +LN+ +++T AG++ L P +NL L L
Sbjct: 236 LAPLKSLSVLVLGETEVTDAGLKELAPLKNLTALNLYGTKVTDAGVKELAPFQNLTLLDL 295
Query: 446 ESCKVTANDIKRL 458
VT IK L
Sbjct: 296 SGTNVTDAGIKEL 308
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 143/281 (50%), Gaps = 6/281 (2%)
Query: 41 YPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC-IQISDGGL 99
+ GV + + V+ + SL ++ L + +TD+GL L NL + FN +++D GL
Sbjct: 81 HTGVTNAGLKVLVA-FKSLTTLSLHDTGITDAGLKELAPLKNLTA--FNLSNTKVTDTGL 137
Query: 100 EHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES 159
+ L + NLT+L R+ IT G+K+ + +L LDL GL L L +L +
Sbjct: 138 KELTAIRNLTALHLRKTE-ITDAGLKSLPPMKDLTTLDLSDTKVTDAGLKALAPLERLTN 196
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
L + + +TD+ +K L+ NL L + +KVTD+G+ L L+ L++L L VT A
Sbjct: 197 LYL-YNTEVTDTGLKELAPSKNLAVLLLYNTKVTDAGLKELAPLKSLSVLVLGETEVTDA 255
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
L L+ L +L LNL +++D G ++ + +L +L+L +TD + L NL
Sbjct: 256 GLKELAPLKNLTALNLYGTKVTDAGVKELAPFQNLTLLDLSGTNVTDAGIKELARFKNLA 315
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
L L S + D GL L L L L L T+ +G++
Sbjct: 316 HLELSSTAVTDVGLKELASLKKLTKLFLISTKTTFAGIKEF 356
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 108/240 (45%), Gaps = 18/240 (7%)
Query: 11 FNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVT 70
EL R LT + L R + D L P + D L ++DLS + VT
Sbjct: 137 LKELTAIRNLTALHL---RKTEITDAGLKSLPPMKD------------LTTLDLSDTKVT 181
Query: 71 DSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGL 130
D+GL L L +L + + +++D GL+ L NL L N +T G+K A L
Sbjct: 182 DAGLKALAPLERLTNL-YLYNTEVTDTGLKELAPSKNLAVL-LLYNTKVTDAGLKELAPL 239
Query: 131 INLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCS 190
+L L L GL L L L +LN+ + +TD+ +K L+ NL L +S +
Sbjct: 240 KSLSVLVLGETEVTDAGLKELAPLKNLTALNL-YGTKVTDAGVKELAPFQNLTLLDLSGT 298
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
VTD+GI L + L L L VT L L++L L L L + + G ++F K
Sbjct: 299 NVTDAGIKELARFKNLAHLELSSTAVTDVGLKELASLKKLTKLFLISTKTTFAGIKEFQK 358
>gi|406835528|ref|ZP_11095122.1| hypothetical protein SpalD1_27934 [Schlesneria paludicola DSM
18645]
Length = 590
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 151/496 (30%), Positives = 231/496 (46%), Gaps = 66/496 (13%)
Query: 25 LEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQ 84
L+ F D L DL L P + D+ + +A +SL++++LS + +TD GL HLK +NL+
Sbjct: 71 LKPFSD--LSDLDLHAIP-ILDRDLKELADL-TSLVNLNLSDTRITDRGLFHLKRLTNLE 126
Query: 85 SLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI 144
++ I+D G++ L L L+ + IT +G++ + NL L L+
Sbjct: 127 TVWLQNT-SITDAGIKELASFERLAELNL-SDTRITDRGLRELSDFQNLTTLWLQNVEMT 184
Query: 145 HGGLVNLKGLMKLESLNIKWCNC-----ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY 199
GL LK L + +L++ N ITD ++ LS L L+ L ++ + DSG+
Sbjct: 185 DDGLQALKRLKTITTLDLSNLNGLNTIRITDEGLEQLSDLPELRHLYLANIPIADSGLTS 244
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
L+ L+ LT+L+L G +T L+ L L L L + Q+SD G + +L L +
Sbjct: 245 LRRLKHLTVLDLRGTQITDEGLNELRGLHELETFKLTKTQISDAGLTALKGLKNLTTLLI 304
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG--- 316
G N+IT L L L L++L+L + D L L+ + L L LSDT + G
Sbjct: 305 GSNQITGTGLQELTNLDQLKTLDLSDTQVTDVELNRLSSIRTLTDLRLSDTPITDVGLRS 364
Query: 317 -------------------LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA 357
+ L+ L +L ++L T I+D L L L L SLNLDA
Sbjct: 365 LRELKRLRRLTLGGTQITDISELNHLRDLTHLDLRVTPITDTGLHGLGDLKHLTSLNLDA 424
Query: 358 RQITDTGLAALTSLTGLTHLDL-------FGAR-----------------ITDSGAAYLR 393
Q+TD L+ L L L L L G + I D G +
Sbjct: 425 TQVTDASLSELKCLVHLKELSLSRTAISGLGFKSLERLEQLTVLRCDRCLIADEGLREIC 484
Query: 394 NFKNLRSLEICGGGLTDAGLT------GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 447
K+L++L I G +TD GL GL L + N+ +T AG+ L L LR+L +
Sbjct: 485 TLKSLKTLVISGTRVTDDGLAELHQLEGLQELRIENNALTDAGMSELMVLGKLRTLGISH 544
Query: 448 CKVTA---NDIKRLQS 460
K+T +DIKRL++
Sbjct: 545 NKITDTSLSDIKRLKN 560
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 126/408 (30%), Positives = 195/408 (47%), Gaps = 40/408 (9%)
Query: 88 FNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGG 147
F + S+ L L+ S+L+ L I + +K A L +LV L+L G
Sbjct: 57 FEEAHKFSEKHLHLLKPFSDLSDLDLH-AIPILDRDLKELADLTSLVNLNLSDTRITDRG 115
Query: 148 LVNLKGLMKLESLNIKWCN--CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
L +LK L LE++ W ITD+ +K L+ L L +S +++TD G+ L Q
Sbjct: 116 LFHLKRLTNLETV---WLQNTSITDAGIKELASFERLAELNLSDTRITDRGLRELSDFQN 172
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNL------NRCQLSDDGCEKFSKIGSLKVLNL 259
LT L L+ +T L +L L ++ L+L N +++D+G E+ S + L+ L L
Sbjct: 173 LTTLWLQNVEMTDDGLQALKRLKTITTLDLSNLNGLNTIRITDEGLEQLSDLPELRHLYL 232
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
I D L L+ L +L L+L I DEGL L GL L+ +L+ TQ+ +GL
Sbjct: 233 ANIPIADSGLTSLRRLKHLTVLDLRGTQITDEGLNELRGLHELETFKLTKTQISDAGLTA 292
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
L GL NL ++ + I+ L++L L LK+L+L Q+TD L L+S+ LT L L
Sbjct: 293 LKGLKNLTTLLIGSNQITGTGLQELTNLDQLKTLDLSDTQVTDVELNRLSSIRTLTDLRL 352
Query: 380 FGARITDSGA----------------------AYLRNFKNLRSLEICGGGLTDAGLTG-- 415
ITD G + L + ++L L++ +TD GL G
Sbjct: 353 SDTPITDVGLRSLRELKRLRRLTLGGTQITDISELNHLRDLTHLDLRVTPITDTGLHGLG 412
Query: 416 ----LVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
L SLN+ +++T A L LK L +L+ L+L ++ K L+
Sbjct: 413 DLKHLTSLNLDATQVTDASLSELKCLVHLKELSLSRTAISGLGFKSLE 460
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 182/373 (48%), Gaps = 11/373 (2%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD GL L D L+ L + I I+D GL LR L +LT L R IT +G+
Sbjct: 213 ITDEGLEQLSDLPELRHL-YLANIPIADSGLTSLRRLKHLTVLDLR-GTQITDEGLNELR 270
Query: 129 GLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
GL L L + GL LKGL L +L I N IT + ++ L+ L LK+L +S
Sbjct: 271 GLHELETFKLTKTQISDAGLTALKGLKNLTTLLI-GSNQITGTGLQELTNLDQLKTLDLS 329
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
++VTD + L ++ LT L L P+T L SL L L L L Q++D +
Sbjct: 330 DTQVTDVELNRLSSIRTLTDLRLSDTPITDVGLRSLRELKRLRRLTLGGTQITD--ISEL 387
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
+ + L L+L ITD L L L +L SLNLD+ + D L L L +LK L LS
Sbjct: 388 NHLRDLTHLDLRVTPITDTGLHGLGDLKHLTSLNLDATQVTDASLSELKCLVHLKELSLS 447
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
T + G + L L L + I+D LR++ L SLK+L + ++TD GLA L
Sbjct: 448 RTAISGLGFKSLERLEQLTVLRCDRCLIADEGLREICTLKSLKTLVISGTRVTDDGLAEL 507
Query: 369 TSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT------GLVSLNVS 422
L GL L + +TD+G + L LR+L I +TD L+ L L +
Sbjct: 508 HQLEGLQELRIENNALTDAGMSELMVLGKLRTLGISHNKITDTSLSDIKRLKNLTMLRIR 567
Query: 423 NSRITSAGLRHLK 435
N+ IT +GL K
Sbjct: 568 NTEITDSGLNGFK 580
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 134/263 (50%), Gaps = 12/263 (4%)
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH 271
E + L L L L+L+ + D ++ + + SL LNL ITD L H
Sbjct: 59 EAHKFSEKHLHLLKPFSDLSDLDLHAIPILDRDLKELADLTSLVNLNLSDTRITDRGLFH 118
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
LK LTNLE++ L + I D G+ L L L LSDT++ GLR LS NL ++ L
Sbjct: 119 LKRLTNLETVWLQNTSITDAGIKELASFERLAELNLSDTRITDRGLRELSDFQNLTTLWL 178
Query: 332 SFTGISDGSLRKLAGLSSLKSLNL------DARQITDTGLAALTSLTGLTHLDLFGARIT 385
++D L+ L L ++ +L+L + +ITD GL L+ L L HL L I
Sbjct: 179 QNVEMTDDGLQALKRLKTITTLDLSNLNGLNTIRITDEGLEQLSDLPELRHLYLANIPIA 238
Query: 386 DSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLN------VSNSRITSAGLRHLKPLKN 439
DSG LR K+L L++ G +TD GL L L+ ++ ++I+ AGL LK LKN
Sbjct: 239 DSGLTSLRRLKHLTVLDLRGTQITDEGLNELRGLHELETFKLTKTQISDAGLTALKGLKN 298
Query: 440 LRSLTLESCKVTANDIKRLQSRD 462
L +L + S ++T ++ L + D
Sbjct: 299 LTTLLIGSNQITGTGLQELTNLD 321
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 139/285 (48%), Gaps = 12/285 (4%)
Query: 188 SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEK 247
K ++ + LK L+ L+L P+ L L+ L SL LNL+ +++D G
Sbjct: 59 EAHKFSEKHLHLLKPFSDLSDLDLHAIPILDRDLKELADLTSLVNLNLSDTRITDRGLFH 118
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL 307
++ +L+ + L ITD + L L LNL I D GL L+ NL L L
Sbjct: 119 LKRLTNLETVWLQNTSITDAGIKELASFERLAELNLSDTRITDRGLRELSDFQNLTTLWL 178
Query: 308 SDTQVGSSGLRHLSGLTNLESINLS------FTGISDGSLRKLAGLSSLKSLNLDARQIT 361
+ ++ GL+ L L + +++LS I+D L +L+ L L+ L L I
Sbjct: 179 QNVEMTDDGLQALKRLKTITTLDLSNLNGLNTIRITDEGLEQLSDLPELRHLYLANIPIA 238
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL----- 416
D+GL +L L LT LDL G +ITD G LR L + ++ ++DAGLT L
Sbjct: 239 DSGLTSLRRLKHLTVLDLRGTQITDEGLNELRGLHELETFKLTKTQISDAGLTALKGLKN 298
Query: 417 -VSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
+L + +++IT GL+ L L L++L L +VT ++ RL S
Sbjct: 299 LTTLLIGSNQITGTGLQELTNLDQLKTLDLSDTQVTDVELNRLSS 343
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 119/241 (49%), Gaps = 17/241 (7%)
Query: 245 CEKFSKIGSLKVLNLGFNE---ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
E+ ++ V+ + F E +++ L LK ++L L+L + I D L L L +
Sbjct: 41 IERDAEAPDHPVIGIAFEEAHKFSEKHLHLLKPFSDLSDLDLHAIPILDRDLKELADLTS 100
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
L L LSDT++ GL HL LTNLE++ L T I+D +++LA L LNL +IT
Sbjct: 101 LVNLNLSDTRITDRGLFHLKRLTNLETVWLQNTSITDAGIKELASFERLAELNLSDTRIT 160
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG-GGL-----TDAGLTG 415
D GL L+ LT L L +TD G L+ K + +L++ GL TD GL
Sbjct: 161 DRGLRELSDFQNLTTLWLQNVEMTDDGLQALKRLKTITTLDLSNLNGLNTIRITDEGLEQ 220
Query: 416 LVSLN------VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSF 469
L L ++N I +GL L+ LK+L L L ++T + L R L L +F
Sbjct: 221 LSDLPELRHLYLANIPIADSGLTSLRRLKHLTVLDLRGTQITDEGLNEL--RGLHELETF 278
Query: 470 R 470
+
Sbjct: 279 K 279
>gi|325110089|ref|YP_004271157.1| hypothetical protein Plabr_3538 [Planctomyces brasiliensis DSM
5305]
gi|324970357|gb|ADY61135.1| leucine-rich repeat-containing protein [Planctomyces brasiliensis
DSM 5305]
Length = 451
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 190/370 (51%), Gaps = 21/370 (5%)
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC 141
N+ ++DF ++ +D L HL G + L + T+ GM GL +L L LE+
Sbjct: 84 NVTAVDFR-SVEAADDALTHLTGTPQVQEL-YLFGPGFTSAGMSDLQGLNDLRLLSLEKT 141
Query: 142 TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLK 201
GLV + + L +L ++ + ++D +K L GL L+ L + + ++D G+ L
Sbjct: 142 LIDDAGLVEIGRIPSLVALRLRQTD-VSDEGLKALGGLDKLRELDLRFTNISDEGLPALA 200
Query: 202 GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF 261
L ++ + L+ ++ + +L+A+ ++ L LN L++ E + L L +
Sbjct: 201 ELDSISTVKLDRTKISDEGVKTLAAIPTIRGLGLNLTNLTNTALEALKERSELVTLEMDD 260
Query: 262 NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS 321
+I D +VHL+G++NL++L+L +GDEG + L +LK L + DT + +G HL+
Sbjct: 261 TQIDDAGIVHLEGMSNLQNLSLRRDDVGDEGFEIIGKLKSLKRLSIRDTVISDAGCAHLA 320
Query: 322 GLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG 381
L NLE+++L+ T I D + L GL +LK+L L +IT G A L +LT L L+L
Sbjct: 321 NLENLETLDLNETFIGDEGVAHLGGLKNLKTLELWFTRITPQGTAPLQNLTALRELNLED 380
Query: 382 ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLR 441
RI DS L AGLT L +LN+ + IT GL HL LKNL
Sbjct: 381 TRIDDSALEPL------------------AGLTELRTLNLKLTPITDEGLVHLHGLKNLE 422
Query: 442 SLTLESCKVT 451
+ L + +V+
Sbjct: 423 FVHLGNTQVS 432
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 157/314 (50%), Gaps = 27/314 (8%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
SL+++ L +DV+D GL L L+ LD F ISD GL L L +++++ R
Sbjct: 155 PSLVALRLRQTDVSDEGLKALGGLDKLRELDLRFT-NISDEGLPALAELDSISTVKLDRT 213
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
I+ +G+K A + + L L L NL T++ ++ L
Sbjct: 214 K-ISDEGVKTLAAIPTIRGLGL--------NLTNL-----------------TNTALEAL 247
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+ L +L++ +++ D+GI +L+G+ L L+L V + + L SL L++
Sbjct: 248 KERSELVTLEMDDTQIDDAGIVHLEGMSNLQNLSLRRDDVGDEGFEIIGKLKSLKRLSIR 307
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
+SD GC + + +L+ L+L I DE + HL GL NL++L L I +G L
Sbjct: 308 DTVISDAGCAHLANLENLETLDLNETFIGDEGVAHLGGLKNLKTLELWFTRITPQGTAPL 367
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
L L+ L L DT++ S L L+GLT L ++NL T I+D L L GL +L+ ++L
Sbjct: 368 QNLTALRELNLEDTRIDDSALEPLAGLTELRTLNLKLTPITDEGLVHLHGLKNLEFVHLG 427
Query: 357 ARQITDTGLAALTS 370
Q++D G AL +
Sbjct: 428 NTQVSDEGTDALKA 441
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 144/296 (48%), Gaps = 11/296 (3%)
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
N+ ++ + D + +L G ++ L L G T+A + L L L L+L + +
Sbjct: 84 NVTAVDFRSVEAADDALTHLTGTPQVQELYLFGPGFTSAGMSDLQGLNDLRLLSLEKTLI 143
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D G + +I SL L L +++DE L L GL L L+L I DEGL L L
Sbjct: 144 DDAGLVEIGRIPSLVALRLRQTDVSDEGLKALGGLDKLRELDLRFTNISDEGLPALAELD 203
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
++ ++L T++ G++ L+ + + + L+ T +++ +L L S L +L +D QI
Sbjct: 204 SISTVKLDRTKISDEGVKTLAAIPTIRGLGLNLTNLTNTALEALKERSELVTLEMDDTQI 263
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LT 414
D G+ L ++ L +L L + D G + K+L+ L I ++DAG L
Sbjct: 264 DDAGIVHLEGMSNLQNLSLRRDDVGDEGFEIIGKLKSLKRLSIRDTVISDAGCAHLANLE 323
Query: 415 GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFR 470
L +L+++ + I G+ HL LKNL++L L ++T LQ NL + R
Sbjct: 324 NLETLDLNETFIGDEGVAHLGGLKNLKTLELWFTRITPQGTAPLQ-----NLTALR 374
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 124/274 (45%), Gaps = 40/274 (14%)
Query: 212 EGCPVT-AACLDSLSALGSLFYLN---------LNRCQLSDDGCEKFSKIGSLKVLNLGF 261
E P +A +++L A G++ N + +DD + ++ L L
Sbjct: 57 ESTPADDSAAVEALEAAGAILKTNAQGNVTAVDFRSVEAADDALTHLTGTPQVQELYLFG 116
Query: 262 NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS 321
T + L+GL +L L+L+ I D GLV + + +L L L T V GL+ L
Sbjct: 117 PGFTSAGMSDLQGLNDLRLLSLEKTLIDDAGLVEIGRIPSLVALRLRQTDVSDEGLKALG 176
Query: 322 GLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG---LAALTSLTG----- 373
GL L ++L FT ISD L LA L S+ ++ LD +I+D G LAA+ ++ G
Sbjct: 177 GLDKLRELDLRFTNISDEGLPALAELDSISTVKLDRTKISDEGVKTLAAIPTIRGLGLNL 236
Query: 374 ----------------LTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG----- 412
L L++ +I D+G +L NL++L + + D G
Sbjct: 237 TNLTNTALEALKERSELVTLEMDDTQIDDAGIVHLEGMSNLQNLSLRRDDVGDEGFEIIG 296
Query: 413 -LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
L L L++ ++ I+ AG HL L+NL +L L
Sbjct: 297 KLKSLKRLSIRDTVISDAGCAHLANLENLETLDL 330
>gi|46446912|ref|YP_008277.1| hypothetical protein pc1278 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400553|emb|CAF24002.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 731
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 146/412 (35%), Positives = 216/412 (52%), Gaps = 23/412 (5%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSN-LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
SSLL+ S VT+ I LK SN ++ L+F+ ++D L L+ NL +L +
Sbjct: 301 SSLLN---QASHVTEFEKI-LKHFSNEIERLNFSKNASLTDAHLLALKNCKNLKALHLQE 356
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
+T G+ A L++L L+L C ++ GL +L L+ L LN+ CN +T++ +
Sbjct: 357 CYKLTDTGLVYLAPLVSLQYLNLFDCIKLTDAGLAHLTPLVALRHLNLMGCNKLTNAGLM 416
Query: 175 PLSGLTNLKSLQISCSK-VTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFY 232
L L L+ L +SC + +TD+G+A+L L L L L C +T A L L L +L +
Sbjct: 417 HLRPLMALQHLDLSCCRNLTDAGLAHLAPLVALQHLCLSECTNLTGAGLAHLKPLVNLQH 476
Query: 233 LNLNRC-QLSDDGCEKFSKIGSLKVLNLG-FNEITDECLVHLKGLTNLESLNLDSC-GIG 289
LNLN C +L+D G + + +L+ L+L +TD L HL+ L L+ L+L+ C
Sbjct: 477 LNLNSCYKLTDAGLAHLTPLMALQHLDLSCCRNLTDAGLAHLRPLVALQHLDLNCCKNFT 536
Query: 290 DEGLVNLTGLCNLKCLELSDTQ-VGSSGLRHLSGLTNLESINLS-FTGISDGSLRKLAGL 347
D GL +LT L L+ L LS + + +GL +L L L +NL+ +D L LA L
Sbjct: 537 DAGLTHLTPLVALQHLNLSCCRNLTDAGLAYLMPLVALSHLNLAGCHNFTDAGLAHLAPL 596
Query: 348 SSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICG 405
+L+ LNL D ++T+ GL LT L L HLDL ++TD+G +L L L++
Sbjct: 597 VALQHLNLGDCYRLTNAGLEHLTPLVALQHLDLSECEKLTDAGLTHLVPLVALTHLDLSE 656
Query: 406 -GGLTDAGLTGLVSLNVSNS-------RITSAGLRHLKPLKNLRSLTLESCK 449
LTDAGL L L ++T AGL HL PL L+ L L CK
Sbjct: 657 CDKLTDAGLAHLTPLEALQHLNLNWCDKLTDAGLAHLTPLLALQDLYLGYCK 708
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 126/361 (34%), Positives = 192/361 (53%), Gaps = 11/361 (3%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD+GL++L +LQ L+ CI+++D GL HL L L L+ N +T G+
Sbjct: 360 LTDTGLVYLAPLVSLQYLNLFDCIKLTDAGLAHLTPLVALRHLNLMGCNKLTNAGLMHLR 419
Query: 129 GLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L+ L LDL C + GL +L L+ L+ L + C +T + + L L NL+ L +
Sbjct: 420 PLMALQHLDLSCCRNLTDAGLAHLAPLVALQHLCLSECTNLTGAGLAHLKPLVNLQHLNL 479
Query: 188 -SCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQ-LSDDG 244
SC K+TD+G+A+L L L L+L C +T A L L L +L +L+LN C+ +D G
Sbjct: 480 NSCYKLTDAGLAHLTPLMALQHLDLSCCRNLTDAGLAHLRPLVALQHLDLNCCKNFTDAG 539
Query: 245 CEKFSKIGSLKVLNLG-FNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNL 302
+ + +L+ LNL +TD L +L L L LNL C D GL +L L L
Sbjct: 540 LTHLTPLVALQHLNLSCCRNLTDAGLAYLMPLVALSHLNLAGCHNFTDAGLAHLAPLVAL 599
Query: 303 KCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL-DARQ 359
+ L L D ++ ++GL HL+ L L+ ++LS ++D L L L +L L+L + +
Sbjct: 600 QHLNLGDCYRLTNAGLEHLTPLVALQHLDLSECEKLTDAGLTHLVPLVALTHLDLSECDK 659
Query: 360 ITDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEI-CGGGLTDAGLTGLV 417
+TD GLA LT L L HL+L + ++TD+G A+L L+ L + T+ GL
Sbjct: 660 LTDAGLAHLTPLEALQHLNLNWCDKLTDAGLAHLTPLLALQDLYLGYCKNFTEVGLAHFK 719
Query: 418 S 418
S
Sbjct: 720 S 720
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 58 SLLSVDLSGSD-VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+L +DLS D +TD+GL HL LQ L+ N+C +++D GL HL L L L
Sbjct: 648 ALTHLDLSECDKLTDAGLAHLTPLEALQHLNLNWCDKLTDAGLAHLTPLLALQDLYLGYC 707
Query: 117 NAITAQGMKAFAGLINLVKLDLER 140
T G+ F + + L + R
Sbjct: 708 KNFTEVGLAHFKSSVAPLHLKIIR 731
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 381 GARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLT---GLVSLNVSN----SRITSAGLR 432
A +TD+ L+N KNL++L + LTD GL LVSL N ++T AGL
Sbjct: 332 NASLTDAHLLALKNCKNLKALHLQECYKLTDTGLVYLAPLVSLQYLNLFDCIKLTDAGLA 391
Query: 433 HLKPLKNLRSLTLESCKVTAN 453
HL PL LR L L C N
Sbjct: 392 HLTPLVALRHLNLMGCNKLTN 412
>gi|46447142|ref|YP_008507.1| hypothetical protein pc1508 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400783|emb|CAF24232.1| hypothetical protein pc1508 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 657
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 133/361 (36%), Positives = 192/361 (53%), Gaps = 41/361 (11%)
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKW 164
+++ L+F RN +T + NL L LE C + GL +L L+ L+ L++
Sbjct: 309 NDIEELNFSRNAYLTDAHLLVLKNCKNLKALYLEGCKNLTDTGLAHLSPLVALQHLSLFD 368
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSK-VTDSGIAYLKGLQKLTLLNLEGCP-VTAACLD 222
C +TD+ + LS L NL+ L +S SK T++G+A+L L L LNL GC +T L
Sbjct: 369 CENLTDAGLAYLSPLENLQHLNLSHSKHFTNAGLAHLSPLAALQHLNLFGCENLTGDGLT 428
Query: 223 SLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLES 280
LS+L +L +L LN C+ L+D G + + +L+ L+L F + +TD L HL L L+
Sbjct: 429 HLSSLVALQHLGLNFCRNLTDAGLAHLAPLVTLQHLDLNFCDNLTDTGLAHLTSLVTLQH 488
Query: 281 LNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFTGISD 338
LNL C + D GLV+L+ L NL+ L+L+D + +GL HL+ L L+ +NL
Sbjct: 489 LNLGWCRNLTDAGLVHLSPLENLQHLDLNDCYNLTDAGLAHLTPLVALQHLNL------- 541
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGAR-ITDSGAAYLRNFKN 397
R+ R++TD GLA LT L L +LDLFG R +TD+G +L
Sbjct: 542 ---RR-------------CRKLTDAGLAHLTPLVALQYLDLFGCRNLTDAGLTHLTPLIA 585
Query: 398 LRSLEI--CGGGLTDAGLTGLVSLNVSN-------SRITSAGLRHLKPLKNLRSLTLESC 448
L+ L + C LTD GL L L V S +T+AGLRHL PL L+ L L C
Sbjct: 586 LQHLYLGLCNN-LTDRGLAHLTPLAVLQRLDLSFCSNLTNAGLRHLSPLVALKYLDLSGC 644
Query: 449 K 449
+
Sbjct: 645 E 645
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 201/400 (50%), Gaps = 36/400 (9%)
Query: 24 SLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLS-GSDVTDSGLIHLKDCSN 82
+L+ + + + L Q P + K+ +I + + ++ S + +TD+ L+ LK+C N
Sbjct: 277 ALKNYLEYTVVSTLLNQAPDLT-KFEKIINYFANDIEELNFSRNAYLTDAHLLVLKNCKN 335
Query: 83 LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT 142
L++L C ++D GL HL L L LS +T G+ + L NL L+L
Sbjct: 336 LKALYLEGCKNLTDTGLAHLSPLVALQHLSLFDCENLTDAGLAYLSPLENLQHLNLSHSK 395
Query: 143 RI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYL 200
+ GL +L L L+ LN+ C +T + LS L L+ L ++ C +TD+G+A+
Sbjct: 396 HFTNAGLAHLSPLAALQHLNLFGCENLTGDGLTHLSSLVALQHLGLNFCRNLTDAGLAH- 454
Query: 201 KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNL 259
L+ L +L +L+LN C L+D G + + +L+ LNL
Sbjct: 455 -----------------------LAPLVTLQHLDLNFCDNLTDTGLAHLTSLVTLQHLNL 491
Query: 260 GF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSG 316
G+ +TD LVHL L NL+ L+L+ C + D GL +LT L L+ L L ++ +G
Sbjct: 492 GWCRNLTDAGLVHLSPLENLQHLDLNDCYNLTDAGLAHLTPLVALQHLNLRRCRKLTDAG 551
Query: 317 LRHLSGLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLTGL 374
L HL+ L L+ ++L ++D L L L +L+ L L +TD GLA LT L L
Sbjct: 552 LAHLTPLVALQYLDLFGCRNLTDAGLTHLTPLIALQHLYLGLCNNLTDRGLAHLTPLAVL 611
Query: 375 THLDL-FGARITDSGAAYLRNFKNLRSLEICG-GGLTDAG 412
LDL F + +T++G +L L+ L++ G LTDAG
Sbjct: 612 QRLDLSFCSNLTNAGLRHLSPLVALKYLDLSGCENLTDAG 651
>gi|46446906|ref|YP_008271.1| hypothetical protein pc1272 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400547|emb|CAF23996.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 618
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 139/399 (34%), Positives = 195/399 (48%), Gaps = 63/399 (15%)
Query: 66 GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMK 125
+ +TD+ L+ LK+C NL+ L C ++D GL +L L+ L
Sbjct: 236 NASLTDAHLLALKNCKNLKVLHLQECRNLTDAGLAYLTPLTTLQ---------------- 279
Query: 126 AFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
L+L C + GL +L L+ L+ LN+ C +TD+ + L+ LT L L
Sbjct: 280 ---------HLNLAGCKFANAGLAHLTPLVALQHLNLSHCRNLTDAGLPHLTLLTALTYL 330
Query: 186 QIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQLSDD 243
+S C +TD+G+A+L L LT LNL C +T A L L+ L +L YLNL+ C
Sbjct: 331 NLSHCRNITDAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLTPLTALTYLNLSSC----- 385
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNL 302
N +TD L HL L L LNL C D GL +LT L L
Sbjct: 386 ------------------NNLTDAGLAHLTPLVTLTHLNLSWCYNFTDAGLAHLTPLVAL 427
Query: 303 KCLELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQ 359
+ L+L + + +GL HL+ L L +NLS+ +D L LA L +L+ L+L+ Q
Sbjct: 428 QHLDLGHCRNITDAGLAHLTPLVALTHLNLSWCYNFTDAGLAHLAPLVALQHLDLNGCWQ 487
Query: 360 ITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICG-GGLTDAGL---- 413
+TD GLA L L LTHLDL +TD+G +L L+ L++ LTDAGL
Sbjct: 488 LTDAGLAHLAPLVALTHLDLSSCNHLTDAGLPHLTPLVALQHLDLSYCRNLTDAGLAHLA 547
Query: 414 --TGLVSLNVSN-SRITSAGLRHLKPLKNLRSLTLESCK 449
L LN+S+ + T AGL HL PL L+ L L C+
Sbjct: 548 PLVALTHLNLSSCNHFTDAGLTHLTPLLALQDLNLNYCE 586
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/310 (40%), Positives = 164/310 (52%), Gaps = 16/310 (5%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGC 214
++E LN +TD+ + L NLK L + C +TD+G+AYL L L LNL GC
Sbjct: 227 EIEELNFSKNASLTDAHLLALKNCKNLKVLHLQECRNLTDAGLAYLTPLTTLQHLNLAGC 286
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL 272
A L L+ L +L +LNL+ C+ L+D G + + +L LNL ITD L HL
Sbjct: 287 KFANAGLAHLTPLVALQHLNLSHCRNLTDAGLPHLTLLTALTYLNLSHCRNITDAGLAHL 346
Query: 273 KGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESIN 330
LT L LNL SC + D GL +LT L L L LS + +GL HL+ L L +N
Sbjct: 347 TPLTALTYLNLSSCNNLTDAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLTPLVTLTHLN 406
Query: 331 LSF-TGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDL-FGARITDS 387
LS+ +D L L L +L+ L+L R ITD GLA LT L LTHL+L + TD+
Sbjct: 407 LSWCYNFTDAGLAHLTPLVALQHLDLGHCRNITDAGLAHLTPLVALTHLNLSWCYNFTDA 466
Query: 388 GAAYLRNFKNLRSLEICG-GGLTDAGLTGLVSLNV-------SNSRITSAGLRHLKPLKN 439
G A+L L+ L++ G LTDAGL L L S + +T AGL HL PL
Sbjct: 467 GLAHLAPLVALQHLDLNGCWQLTDAGLAHLAPLVALTHLDLSSCNHLTDAGLPHLTPLVA 526
Query: 440 LRSLTLESCK 449
L+ L L C+
Sbjct: 527 LQHLDLSYCR 536
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 187/392 (47%), Gaps = 38/392 (9%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLL 60
P +I + F++ + LT+ L A ++C L+ L L + + D + + + ++L
Sbjct: 224 FPNEIEELNFSK---NASLTDAHLLALKNCKNLKVLHLQECRNLTDAGLAYL-TPLTTLQ 279
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISD------------------------ 96
++L+G ++GL HL LQ L+ + C ++D
Sbjct: 280 HLNLAGCKFANAGLAHLTPLVALQHLNLSHCRNLTDAGLPHLTLLTALTYLNLSHCRNIT 339
Query: 97 -GGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGL 154
GL HL L+ LT L+ N +T G+ L L L+L C + GL +L L
Sbjct: 340 DAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLTPL 399
Query: 155 MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEG 213
+ L LN+ WC TD+ + L+ L L+ L + C +TD+G+A+L L LT LNL
Sbjct: 400 VTLTHLNLSWCYNFTDAGLAHLTPLVALQHLDLGHCRNITDAGLAHLTPLVALTHLNLSW 459
Query: 214 CP-VTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGF-NEITDECLV 270
C T A L L+ L +L +L+LN C QL+D G + + +L L+L N +TD L
Sbjct: 460 CYNFTDAGLAHLAPLVALQHLDLNGCWQLTDAGLAHLAPLVALTHLDLSSCNHLTDAGLP 519
Query: 271 HLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLES 328
HL L L+ L+L C + D GL +L L L L LS +GL HL+ L L+
Sbjct: 520 HLTPLVALQHLDLSYCRNLTDAGLAHLAPLVALTHLNLSSCNHFTDAGLTHLTPLLALQD 579
Query: 329 INLSF-TGISDGSLRKLAGLSSLKSLNLDARQ 359
+NL++ +D L L++ +LNL Q
Sbjct: 580 LNLNYCENFTDAGLAHFKSLATFPNLNLICYQ 611
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 312 VGSSGLRHLSGLTNLESI---------NLSFT---GISDGSLRKLAGLSSLKSLNL-DAR 358
V SS L S LT E I L+F+ ++D L L +LK L+L + R
Sbjct: 203 VVSSLLNQTSHLTGFEKILNHFPNEIEELNFSKNASLTDAHLLALKNCKNLKVLHLQECR 262
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGLV 417
+TD GLA LT LT L HL+L G + ++G A+L L+ L + LTDAGL L
Sbjct: 263 NLTDAGLAYLTPLTTLQHLNLAGCKFANAGLAHLTPLVALQHLNLSHCRNLTDAGLPHLT 322
Query: 418 SLNV------SNSR-ITSAGLRHLKPLKNLRSLTLESC 448
L S+ R IT AGL HL PL L L L SC
Sbjct: 323 LLTALTYLNLSHCRNITDAGLAHLTPLTALTYLNLSSC 360
>gi|301098037|ref|XP_002898112.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105473|gb|EEY63525.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 648
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 233/510 (45%), Gaps = 44/510 (8%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQG-SSL 59
+LP +++ + L L + +A L + L + V D W D I + S+
Sbjct: 141 VLPPELALSVLQWLKQHYVLDKPQFQALTPLLLLEWNLADHQDVEDSWFDDIPEKTLESV 200
Query: 60 LSVDLSG----SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
S+D+SG + H+ L F C +S +E L+ + LT+L+
Sbjct: 201 KSIDVSGCIHLQQLGSEWGRHVNRLPELLVASFQGCTGLSKETIEMLKLSTKLTTLNLSG 260
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
+ + +K+ L +L L L C R+ G+ L L KLE L + C +TD
Sbjct: 261 CANVDDKCVKSLRQLEHLKSLQLVGCRRLTDKGVKRLFKLTKLEKLRLGRCRKLTDDAFG 320
Query: 175 P-LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFY 232
+ L+ L +S ++++ + ++ ++ L +L + GC ++ + SL+ L +L Y
Sbjct: 321 GFVDSFPKLRELDVSNCRLSERAMQHIGQVKSLEVLVIRGCQDISDVGMASLAELTNLKY 380
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
+ C ++++ L+VL LG+ + L+ LT L+ L L C I G
Sbjct: 381 FDARHCGKIHSIPTEWTQ---LEVLLLGYTAFAESDAAVLQYLTKLQELELRKCRIMKRG 437
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHL-SGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
++ L +L+ LE+++T + S L + + NL+++N+S T ISD L L L+
Sbjct: 438 FQFISRLKHLERLEVAETALTDSRLLEICNNAINLKALNVSNTEISDSGTTGLTKLKELR 497
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
L LD IT+ LA L+ L L LDLFGA ITD+G +L L+ L ICGG + D
Sbjct: 498 ILGLDTSGITNRALANLSFLPQLERLDLFGANITDNGLMHLIPLHKLQELAICGGNIGDR 557
Query: 412 G-------------------------------LTGLVSLNVSNSRITSAGLRHLKPLKNL 440
G LT L LN+SN+ I++ LRHL PLK L
Sbjct: 558 GVGLISKLTSLTSLNLSQNRNIRTKSLFYLRSLTSLRCLNLSNTGISALSLRHLSPLKEL 617
Query: 441 RSLTLESCKVTANDIKRLQSRDLPNLVSFR 470
+SL++ C ++ I L+ LP L R
Sbjct: 618 QSLSVYGCSLSQGHIDVLRE-ILPELKCLR 646
>gi|46446626|ref|YP_007991.1| hypothetical protein pc0992 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400267|emb|CAF23716.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 583
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 137/392 (34%), Positives = 208/392 (53%), Gaps = 47/392 (11%)
Query: 47 KWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGL 105
++ +I + + ++D S + +TD+ L+ LK+C NL+ L C+ I+D GL HL
Sbjct: 216 EFEKIINHFSNEIEALDFSNNAHLTDAHLLALKNCENLKVLHLEACLAITDDGLAHL--- 272
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKW 164
A L+ L LDL C + GL +L L L+ L+++
Sbjct: 273 ----------------------APLVALQHLDLSDCENLTDVGLAHLTPLTALQHLDLRG 310
Query: 165 CNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
C TD+ + L+ LT L+ L +S CS TD+G+A+L L L L+L GC +T A L
Sbjct: 311 C-YFTDAGLAHLTPLTALQHLNLSFCSNATDAGLAHLTPLTALQHLDLRGCYLTDAGLAH 369
Query: 224 LSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESL 281
L+ L L +L+L C+ L+D G + +L+ LNL + +TD L HL LT L+ L
Sbjct: 370 LTPLTGLQHLDLIGCKDLTDAGLAHLRPLTALQHLNLNWCRNLTDAGLAHLTPLTALQHL 429
Query: 282 NLDSCG-IGDEGLVNLTGLCNLK------CLELSDTQVGSSGLRHLSGLTNLESINLS-F 333
+L C I D+GL +LT L L+ C +L+D +GL HL+ LT L+ +NL+ +
Sbjct: 430 DLSFCSNITDDGLAHLTLLTTLQHLNLSGCYKLTD-----AGLAHLTLLTGLQHLNLNWY 484
Query: 334 TGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFG-ARITDSGAAY 391
++D L L L+ L+ L L D + +TD GLA LT LT L HL+L G ++TD+G A+
Sbjct: 485 KNLTDAGLAHLTPLAGLQYLALTDCKNLTDAGLAHLTPLTALQHLNLSGCYKLTDAGLAH 544
Query: 392 LRNFKNLRSLEICG-GGLTDAGLTGLVSLNVS 422
L + L+ L++ LTD GL +L S
Sbjct: 545 LTSLTALQYLDLSYCMNLTDDGLDRFKTLATS 576
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 124/361 (34%), Positives = 175/361 (48%), Gaps = 37/361 (10%)
Query: 108 LTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCN 166
+ +L F N +T + A NL L LE C I GL +L L+ L+ L++ C
Sbjct: 228 IEALDFSNNAHLTDAHLLALKNCENLKVLHLEACLAITDDGLAHLAPLVALQHLDLSDCE 287
Query: 167 CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLS 225
+TD + L+ LT L+ L + TD+G+A+L L L LNL C T A L L+
Sbjct: 288 NLTDVGLAHLTPLTALQHLDLRGCYFTDAGLAHLTPLTALQHLNLSFCSNATDAGLAHLT 347
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLD 284
L +L +L+L C L+D G + + L+ L+L G ++TD L HL+ LT L+ LNL+
Sbjct: 348 PLTALQHLDLRGCYLTDAGLAHLTPLTGLQHLDLIGCKDLTDAGLAHLRPLTALQHLNLN 407
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG--ISDGSLR 342
C NLT +GL HL+ LT L+ ++LSF DG
Sbjct: 408 WCR-------NLT----------------DAGLAHLTPLTALQHLDLSFCSNITDDGLAH 444
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSL 401
+ ++TD GLA LT LTGL HL+L + +TD+G A+L L+ L
Sbjct: 445 LTLLTTLQHLNLSGCYKLTDAGLAHLTLLTGLQHLNLNWYKNLTDAGLAHLTPLAGLQYL 504
Query: 402 EICG-GGLTDAGL------TGLVSLNVSN-SRITSAGLRHLKPLKNLRSLTLESCKVTAN 453
+ LTDAGL T L LN+S ++T AGL HL L L+ L L C +
Sbjct: 505 ALTDCKNLTDAGLAHLTPLTALQHLNLSGCYKLTDAGLAHLTSLTALQYLDLSYCMNLTD 564
Query: 454 D 454
D
Sbjct: 565 D 565
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 160/307 (52%), Gaps = 36/307 (11%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
++E+L+ +TD+ + L NLK L + +C +TD G+A+L L L L+L C
Sbjct: 227 EIEALDFSNNAHLTDAHLLALKNCENLKVLHLEACLAITDDGLAHLAPLVALQHLDLSDC 286
Query: 215 P-VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL 272
+T L L+ L +L +L+L C +D G + + +L+ LNL F + TD L HL
Sbjct: 287 ENLTDVGLAHLTPLTALQHLDLRGCYFTDAGLAHLTPLTALQHLNLSFCSNATDAGLAHL 346
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ-VGSSGLRHLSGLTNLESINL 331
LT L+ L+L C + D GL +LT L L+ L+L + + +GL HL LT L+ +NL
Sbjct: 347 TPLTALQHLDLRGCYLTDAGLAHLTPLTGLQHLDLIGCKDLTDAGLAHLRPLTALQHLNL 406
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL-FGARITDSGAA 390
++ R +TD GLA LT LT L HLDL F + ITD G A
Sbjct: 407 NW-----------------------CRNLTDAGLAHLTPLTALQHLDLSFCSNITDDGLA 443
Query: 391 YLRNFKNLRSLEICG-GGLTDAGL------TGLVSLNVSNSR-ITSAGLRHLKPLKNLRS 442
+L L+ L + G LTDAGL TGL LN++ + +T AGL HL PL L+
Sbjct: 444 HLTLLTTLQHLNLSGCYKLTDAGLAHLTLLTGLQHLNLNWYKNLTDAGLAHLTPLAGLQY 503
Query: 443 LTLESCK 449
L L CK
Sbjct: 504 LALTDCK 510
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 131/407 (32%), Positives = 191/407 (46%), Gaps = 48/407 (11%)
Query: 70 TDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAG 129
T+ L+ LK+ NF Q L L+ T++S N I + F
Sbjct: 173 TEESLVRLKEI-------LNFAQQYQ---LNALKNYLEFTAVSALLNQTIQ---LAEFEK 219
Query: 130 LINLVKLDLE--------RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
+IN ++E T H L+ LK L+ L+++ C ITD + L+ L
Sbjct: 220 IINHFSNEIEALDFSNNAHLTDAH--LLALKNCENLKVLHLEACLAITDDGLAHLAPLVA 277
Query: 182 LKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC-Q 239
L+ L +S C +TD G+A+L L L L+L GC T A L L+ L +L +LNL+ C
Sbjct: 278 LQHLDLSDCENLTDVGLAHLTPLTALQHLDLRGCYFTDAGLAHLTPLTALQHLNLSFCSN 337
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTG 298
+D G + + +L+ L+L +TD L HL LT L+ L+L C + D GL +L
Sbjct: 338 ATDAGLAHLTPLTALQHLDLRGCYLTDAGLAHLTPLTGLQHLDLIGCKDLTDAGLAHLRP 397
Query: 299 LCNLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSFTG--ISDGSLRKLAGLSSLKSLNL 355
L L+ L L+ + + +GL HL+ LT L+ ++LSF DG +
Sbjct: 398 LTALQHLNLNWCRNLTDAGLAHLTPLTALQHLDLSFCSNITDDGLAHLTLLTTLQHLNLS 457
Query: 356 DARQITDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT 414
++TD GLA LT LTGL HL+L + +TD+G A+L L+ L LTD
Sbjct: 458 GCYKLTDAGLAHLTLLTGLQHLNLNWYKNLTDAGLAHLTPLAGLQYL-----ALTDC--- 509
Query: 415 GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC-KVTANDIKRLQS 460
+T AGL HL PL L+ L L C K+T + L S
Sbjct: 510 ---------KNLTDAGLAHLTPLTALQHLNLSGCYKLTDAGLAHLTS 547
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
++TD+GL HL + LQ L+ + C +++D GL HL L+ L L +T G+ F
Sbjct: 511 NLTDAGLAHLTPLTALQHLNLSGCYKLTDAGLAHLTSLTALQYLDLSYCMNLTDDGLDRF 570
Query: 128 AGLINLVKLDLER 140
L + L++ R
Sbjct: 571 KTLATSLNLEIIR 583
>gi|46447199|ref|YP_008564.1| hypothetical protein pc1565 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400840|emb|CAF24289.1| hypothetical protein pc1565 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 1143
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 139/365 (38%), Positives = 201/365 (55%), Gaps = 12/365 (3%)
Query: 20 LTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHL 77
LT+ L A +DC L+ L L + D + + S +L +DL G +TDSGL HL
Sbjct: 767 LTDAHLLALKDCKNLKVLRLHECRNFTDAGLAHL-SPLVALQHLDLGGCYKITDSGLAHL 825
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLD 137
LQ LD C +I+D GL +L L L L+ R +T G+ + L+ L LD
Sbjct: 826 SRLVALQHLDLGGCYEITDSGLTYLSRLVALQHLNLNRCVCLTDDGLAYLSHLVALQYLD 885
Query: 138 LERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDS 195
L+RC +I GL +L L+ L+ LN+ CN +TDS + LS LT+LK L + C+K+TDS
Sbjct: 886 LDRCWKITDRGLAHLSSLLALQHLNLGCCNNLTDSGLAHLSHLTSLKHLDLRDCAKLTDS 945
Query: 196 GIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGS 253
G+A+L L L LNL C +T L LS L +L +L+L C +++D G S + +
Sbjct: 946 GLAHLSLLVNLQYLNLNRCNNLTDRGLAHLSHLVALQHLDLGECYKITDSGLAHLSLLVN 1005
Query: 254 LKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDT 310
L+ LNL + +TD L HL L L+ LNL+ C + D+GL L+ L L+ L L S
Sbjct: 1006 LQYLNLNRCDNLTDRGLAHLSRLVTLQHLNLNCCVCLTDDGLAYLSPLVALRHLNLRSCD 1065
Query: 311 QVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAAL 368
+ S+GL HL+ L L+ +NLS+ ++D L L L+SLK L+L + T +GLA
Sbjct: 1066 NLTSAGLAHLTPLIALQYLNLSYCDSLNDNGLTHLTRLASLKHLDLSECPYFTISGLAHF 1125
Query: 369 TSLTG 373
+L
Sbjct: 1126 KALAA 1130
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 128/320 (40%), Positives = 179/320 (55%), Gaps = 10/320 (3%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+ TD+GL HL LQ LD C +I+D GL +L L L L+ +T G+
Sbjct: 226 NFTDAGLAHLSRLVALQHLDLGGCYKITDSGLTYLSRLVALQHLNLNCCVCLTDDGLAYL 285
Query: 128 AGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
+ L+ L LDL C +I GL +L L+ L+ LN+ CN +TDS + LS LT+LK L
Sbjct: 286 SHLVALQHLDLGECYKITDSGLAHLSSLLALQHLNLGCCNNLTDSGLAHLSHLTSLKHLD 345
Query: 187 I-SCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QLSDD 243
+ C+K+TDSG+A+L L L LNL C +T L LS L +L YL+L C +L+
Sbjct: 346 LRDCAKLTDSGLAHLSLLVNLQYLNLNRCYNLTDRGLSHLSHLVALQYLDLGLCKKLTSS 405
Query: 244 GCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCN 301
G S + +L+ L+L EITD L HL L L+ LNL+ C + D+GL L+ L
Sbjct: 406 GLAHLSPLVALQYLDLDRCGEITDRGLAHLSRLVALQHLNLNCCACLTDDGLAYLSPLVA 465
Query: 302 LKCLELSDT-QVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL-DAR 358
L+ L L + S+GL HL+ L L+ +NLS+ ++D L L L+SLK L+L +
Sbjct: 466 LRHLNLRCCGNLTSAGLAHLTPLIALQYLNLSYCDSLNDNGLTHLTRLASLKHLDLSECP 525
Query: 359 QITDTGLAALTSL-TGLTHL 377
TD+GLA T+L T LTH
Sbjct: 526 YFTDSGLAHFTALATSLTHF 545
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 134/363 (36%), Positives = 184/363 (50%), Gaps = 36/363 (9%)
Query: 96 DGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGL 154
+GG+E SL F N +T + A NL L L C GL +L L
Sbjct: 753 EGGIE---------SLDFSNNAYLTDAHLLALKDCKNLKVLRLHECRNFTDAGLAHLSPL 803
Query: 155 MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEG 213
+ L+ L++ C ITDS + LS L L+ L + C ++TDSG+ YL L L LNL
Sbjct: 804 VALQHLDLGGCYKITDSGLAHLSRLVALQHLDLGGCYEITDSGLTYLSRLVALQHLNLNR 863
Query: 214 CP-VTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGF-NEITDECLV 270
C +T L LS L +L YL+L+RC +++D G S + +L+ LNLG N +TD L
Sbjct: 864 CVCLTDDGLAYLSHLVALQYLDLDRCWKITDRGLAHLSSLLALQHLNLGCCNNLTDSGLA 923
Query: 271 HLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLES 328
HL LT+L+ L+L C + D GL +L+ L NL+ L L+ + GL HLS L L+
Sbjct: 924 HLSHLTSLKHLDLRDCAKLTDSGLAHLSLLVNLQYLNLNRCNNLTDRGLAHLSHLVALQH 983
Query: 329 INL-SFTGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLTGLTHLDLFGAR-IT 385
++L I+D L L+ L +L+ LNL+ +TD GLA L+ L L HL+L +T
Sbjct: 984 LDLGECYKITDSGLAHLSLLVNLQYLNLNRCDNLTDRGLAHLSRLVTLQHLNLNCCVCLT 1043
Query: 386 DSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
D G AYL LR L + S +TSAGL HL PL L+ L L
Sbjct: 1044 DDGLAYLSPLVALRHLNL-----------------RSCDNLTSAGLAHLTPLIALQYLNL 1086
Query: 446 ESC 448
C
Sbjct: 1087 SYC 1089
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 124/309 (40%), Positives = 175/309 (56%), Gaps = 17/309 (5%)
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC- 214
+ESL+ +TD+ + L NLK L++ C TD+G+A+L L L L+L GC
Sbjct: 191 IESLDFSNNAYLTDAHLLALKDCKNLKVLRLHECRNFTDAGLAHLSRLVALQHLDLGGCY 250
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLG-FNEITDECLVHL 272
+T + L LS L +L +LNLN C L+DDG S + +L+ L+LG +ITD L HL
Sbjct: 251 KITDSGLTYLSRLVALQHLNLNCCVCLTDDGLAYLSHLVALQHLDLGECYKITDSGLAHL 310
Query: 273 KGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESIN 330
L L+ LNL C + D GL +L+ L +LK L+L D ++ SGL HLS L NL+ +N
Sbjct: 311 SSLLALQHLNLGCCNNLTDSGLAHLSHLTSLKHLDLRDCAKLTDSGLAHLSLLVNLQYLN 370
Query: 331 LSF-TGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLTGLTHLDL-FGARITDS 387
L+ ++D L L+ L +L+ L+L +++T +GLA L+ L L +LDL ITD
Sbjct: 371 LNRCYNLTDRGLSHLSHLVALQYLDLGLCKKLTSSGLAHLSPLVALQYLDLDRCGEITDR 430
Query: 388 GAAYLRNFKNLRSLEI-CGGGLTDAGL---TGLVSLNVSNSR----ITSAGLRHLKPLKN 439
G A+L L+ L + C LTD GL + LV+L N R +TSAGL HL PL
Sbjct: 431 GLAHLSRLVALQHLNLNCCACLTDDGLAYLSPLVALRHLNLRCCGNLTSAGLAHLTPLIA 490
Query: 440 LRSLTLESC 448
L+ L L C
Sbjct: 491 LQYLNLSYC 499
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 126/222 (56%), Gaps = 7/222 (3%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
+++TDSGL HL ++L+ LD C +++D GL HL L NL L+ R N +T +G+
Sbjct: 915 NNLTDSGLAHLSHLTSLKHLDLRDCAKLTDSGLAHLSLLVNLQYLNLNRCNNLTDRGLAH 974
Query: 127 FAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
+ L+ L LDL C +I GL +L L+ L+ LN+ C+ +TD + LS L L+ L
Sbjct: 975 LSHLVALQHLDLGECYKITDSGLAHLSLLVNLQYLNLNRCDNLTDRGLAHLSRLVTLQHL 1034
Query: 186 QISCSK-VTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QLSD 242
++C +TD G+AYL L L LNL C +T+A L L+ L +L YLNL+ C L+D
Sbjct: 1035 NLNCCVCLTDDGLAYLSPLVALRHLNLRSCDNLTSAGLAHLTPLIALQYLNLSYCDSLND 1094
Query: 243 DGCEKFSKIGSLKVLNLG-FNEITDECLVHLKGLTNLESLNL 283
+G +++ SLK L+L T L H K L SLNL
Sbjct: 1095 NGLTHLTRLASLKHLDLSECPYFTISGLAHFKALA--ASLNL 1134
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 120/215 (55%), Gaps = 5/215 (2%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
+++TDSGL HL ++L+ LD C +++D GL HL L NL L+ R +T +G+
Sbjct: 325 NNLTDSGLAHLSHLTSLKHLDLRDCAKLTDSGLAHLSLLVNLQYLNLNRCYNLTDRGLSH 384
Query: 127 FAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
+ L+ L LDL C ++ GL +L L+ L+ L++ C ITD + LS L L+ L
Sbjct: 385 LSHLVALQYLDLGLCKKLTSSGLAHLSPLVALQYLDLDRCGEITDRGLAHLSRLVALQHL 444
Query: 186 QISCSK-VTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSD 242
++C +TD G+AYL L L LNL C +T+A L L+ L +L YLNL+ C L+D
Sbjct: 445 NLNCCACLTDDGLAYLSPLVALRHLNLRCCGNLTSAGLAHLTPLIALQYLNLSYCDSLND 504
Query: 243 DGCEKFSKIGSLKVLNLG-FNEITDECLVHLKGLT 276
+G +++ SLK L+L TD L H L
Sbjct: 505 NGLTHLTRLASLKHLDLSECPYFTDSGLAHFTALA 539
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 111/200 (55%), Gaps = 15/200 (7%)
Query: 264 ITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLS 321
+TD L+ LK NL+ L L C D GL +L+ L L+ L+L ++ SGL +LS
Sbjct: 202 LTDAHLLALKDCKNLKVLRLHECRNFTDAGLAHLSRLVALQHLDLGGCYKITDSGLTYLS 261
Query: 322 GLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDL 379
L L+ +NL+ ++D L L+ L +L+ L+L + +ITD+GLA L+SL L HL+L
Sbjct: 262 RLVALQHLNLNCCVCLTDDGLAYLSHLVALQHLDLGECYKITDSGLAHLSSLLALQHLNL 321
Query: 380 FGAR-ITDSGAAYLRNFKNLRSLEI--CGGGLTDAGLTGL---VSLNVSN----SRITSA 429
+TDSG A+L + +L+ L++ C LTD+GL L V+L N +T
Sbjct: 322 GCCNNLTDSGLAHLSHLTSLKHLDLRDCAK-LTDSGLAHLSLLVNLQYLNLNRCYNLTDR 380
Query: 430 GLRHLKPLKNLRSLTLESCK 449
GL HL L L+ L L CK
Sbjct: 381 GLSHLSHLVALQYLDLGLCK 400
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 75/138 (54%), Gaps = 12/138 (8%)
Query: 326 LESINLSFTG-ISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFG-A 382
+ES++ S ++D L L +LK L L + R TD GLA L+ L L HLDL G
Sbjct: 756 IESLDFSNNAYLTDAHLLALKDCKNLKVLRLHECRNFTDAGLAHLSPLVALQHLDLGGCY 815
Query: 383 RITDSGAAYLRNFKNLRSLEICG-GGLTDAGLT------GLVSLNVSNSR-ITSAGLRHL 434
+ITDSG A+L L+ L++ G +TD+GLT L LN++ +T GL +L
Sbjct: 816 KITDSGLAHLSRLVALQHLDLGGCYEITDSGLTYLSRLVALQHLNLNRCVCLTDDGLAYL 875
Query: 435 KPLKNLRSLTLESC-KVT 451
L L+ L L+ C K+T
Sbjct: 876 SHLVALQYLDLDRCWKIT 893
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 65 SGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
S ++T +GL HL LQ L+ ++C ++D GL HL L++L L T G+
Sbjct: 1063 SCDNLTSAGLAHLTPLIALQYLNLSYCDSLNDNGLTHLTRLASLKHLDLSECPYFTISGL 1122
Query: 125 KAFAGLINLVKLDLER 140
F L + L + R
Sbjct: 1123 AHFKALAASLNLKIIR 1138
>gi|87311782|ref|ZP_01093896.1| hypothetical protein DSM3645_04405 [Blastopirellula marina DSM
3645]
gi|87285456|gb|EAQ77376.1| hypothetical protein DSM3645_04405 [Blastopirellula marina DSM
3645]
Length = 427
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 175/353 (49%), Gaps = 30/353 (8%)
Query: 66 GSDVTDSGLIHLKDCSNLQSLDFNFC-IQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
G+DVTD + +L +L+ DF+ ISD G+E L L +L+ L RR N I+ + +
Sbjct: 92 GADVTDKTIDNLLQMKDLR--DFSAANTTISDAGIEKLSALKDLSVLQLRRTN-ISNKSL 148
Query: 125 KAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
++ L L LDL + ITD+ M+ ++ + N++
Sbjct: 149 ESMLQLPKLRYLDLR-------------------------YDDITDAGMEIVAKMPNMEV 183
Query: 185 LQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
L++ + V D G+A+L GL KL LN+ G VT A S++ L +L L N L+ +G
Sbjct: 184 LRLEGAIVGDEGLAHLTGLSKLKFLNVRGTNVTDAGFKSIANLTNLETLETNGTALTTEG 243
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
E + + +K L L ++ D+ VHLK + L++L L + G+ NL G+ LK
Sbjct: 244 MEYLAPLTKVKTLELMRAQVKDDGFVHLKEMKQLQNLMLRQTRVAGAGMENLIGIDTLKS 303
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 364
L++S+T G GL H+ NLE +NL FT ++ L + L+++K+L LD + ITD
Sbjct: 304 LDVSETPFGDDGLIHVGKFKNLEKLNLWFTKVTPDGLPHIKDLTNMKTLILDYQGITDDS 363
Query: 365 LAALTSLTGLTHLDLF-GARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL 416
L L + L L L IT+ YL+ K L+ + I + G+ L
Sbjct: 364 LENLVGMQKLQTLSLKDNDMITNESIKYLKQLKGLKKISITFTQIDSRGVAEL 416
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 157/298 (52%), Gaps = 6/298 (2%)
Query: 167 CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA 226
+D ++PLS L ++K L++ + VTD I L ++ L + ++ A ++ LSA
Sbjct: 70 SFSDEQLEPLSKLKHVKILKVYGADVTDKTIDNLLQMKDLRDFSAANTTISDAGIEKLSA 129
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC 286
L L L L R +S+ E ++ L+ L+L +++ITD + + + N+E L L+
Sbjct: 130 LKDLSVLQLRRTNISNKSLESMLQLPKLRYLDLRYDDITDAGMEIVAKMPNMEVLRLEGA 189
Query: 287 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAG 346
+GDEGL +LTGL LK L + T V +G + ++ LTNLE++ + T ++ + LA
Sbjct: 190 IVGDEGLAHLTGLSKLKFLNVRGTNVTDAGFKSIANLTNLETLETNGTALTTEGMEYLAP 249
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG 406
L+ +K+L L Q+ D G L + L +L L R+ +G L L+SL++
Sbjct: 250 LTKVKTLELMRAQVKDDGFVHLKEMKQLQNLMLRQTRVAGAGMENLIGIDTLKSLDVSET 309
Query: 407 GLTDAGL------TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
D GL L LN+ +++T GL H+K L N+++L L+ +T + ++ L
Sbjct: 310 PFGDDGLIHVGKFKNLEKLNLWFTKVTPDGLPHIKDLTNMKTLILDYQGITDDSLENL 367
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 169/350 (48%), Gaps = 34/350 (9%)
Query: 150 NLKGLMKLESLNI--KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
L+ L KL+ + I + +TD + L + +L+ + + ++D+GI L L+ L+
Sbjct: 75 QLEPLSKLKHVKILKVYGADVTDKTIDNLLQMKDLRDFSAANTTISDAGIEKLSALKDLS 134
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
+L L ++ L+S+ L L YL+L ++D G E +K+ +++VL L + DE
Sbjct: 135 VLQLRRTNISNKSLESMLQLPKLRYLDLRYDDITDAGMEIVAKMPNMEVLRLEGAIVGDE 194
Query: 268 CLVHLKGL------------------------TNLESLNLDSCGIGDEGLVNLTGLCNLK 303
L HL GL TNLE+L + + EG+ L L +K
Sbjct: 195 GLAHLTGLSKLKFLNVRGTNVTDAGFKSIANLTNLETLETNGTALTTEGMEYLAPLTKVK 254
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
LEL QV G HL + L+++ L T ++ + L G+ +LKSL++ D
Sbjct: 255 TLELMRAQVKDDGFVHLKEMKQLQNLMLRQTRVAGAGMENLIGIDTLKSLDVSETPFGDD 314
Query: 364 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLN--- 420
GL + L L+L+ ++T G ++++ N+++L + G+TD L LV +
Sbjct: 315 GLIHVGKFKNLEKLNLWFTKVTPDGLPHIKDLTNMKTLILDYQGITDDSLENLVGMQKLQ 374
Query: 421 ----VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
N IT+ +++LK LK L+ +++ ++ + + L+ ++LP L
Sbjct: 375 TLSLKDNDMITNESIKYLKQLKGLKKISITFTQIDSRGVAELK-KELPGL 423
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 118/229 (51%), Gaps = 6/229 (2%)
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
G + +++ SD+ E SK+ +K+L + ++TD+ + +L + +L + +
Sbjct: 59 GVVTVADMSVASFSDEQLEPLSKLKHVKILKVYGADVTDKTIDNLLQMKDLRDFSAANTT 118
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
I D G+ L+ L +L L+L T + + L + L L ++L + I+D + +A +
Sbjct: 119 ISDAGIEKLSALKDLSVLQLRRTNISNKSLESMLQLPKLRYLDLRYDDITDAGMEIVAKM 178
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGG 407
+++ L L+ + D GLA LT L+ L L++ G +TD+G + N NL +LE G
Sbjct: 179 PNMEVLRLEGAIVGDEGLAHLTGLSKLKFLNVRGTNVTDAGFKSIANLTNLETLETNGTA 238
Query: 408 LTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
LT G LT + +L + +++ G HLK +K L++L L +V
Sbjct: 239 LTTEGMEYLAPLTKVKTLELMRAQVKDDGFVHLKEMKQLQNLMLRQTRV 287
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 115/241 (47%), Gaps = 28/241 (11%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
S L +++ G++VTD+G + + +NL++L+ N
Sbjct: 203 SKLKFLNVRGTNVTDAGFKSIANLTNLETLETN--------------------------G 236
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
A+T +GM+ A L + L+L R G V+LK + +L++L ++ + + M+ L
Sbjct: 237 TALTTEGMEYLAPLTKVKTLELMRAQVKDDGFVHLKEMKQLQNLMLRQTR-VAGAGMENL 295
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
G+ LKSL +S + D G+ ++ + L LNL VT L + L ++ L L+
Sbjct: 296 IGIDTLKSLDVSETPFGDDGLIHVGKFKNLEKLNLWFTKVTPDGLPHIKDLTNMKTLILD 355
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNE-ITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
++DD E + L+ L+L N+ IT+E + +LK L L+ +++ I G+
Sbjct: 356 YQGITDDSLENLVGMQKLQTLSLKDNDMITNESIKYLKQLKGLKKISITFTQIDSRGVAE 415
Query: 296 L 296
L
Sbjct: 416 L 416
>gi|301118238|ref|XP_002906847.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108196|gb|EEY66248.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 648
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 246/497 (49%), Gaps = 54/497 (10%)
Query: 20 LTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIA-SQGSSLLSVDLSGSDV-TDSGLIH 76
LT+ S+E + + L + L V DK + ++ SQ +SL SV+L V +D G+
Sbjct: 153 LTDESVEQLANLSGLTSVALKGCYQVTDKSIKLLTESQSNSLTSVNLGYCKVVSDEGITA 212
Query: 77 L-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN--AITAQGMKAFAGLINL 133
+ + S L L+ C Q+ D G+ L L NL +L+ N A+T G+ A A + +L
Sbjct: 213 IASNLSKLNYLNLRGCSQVGDNGIRALARLKNLQTLNLWYCNQGALTDGGISALAEVTSL 272
Query: 134 VKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSK 191
L+L C+++ G+ +L L+KL L I +TD L+ L NL +L ++ C
Sbjct: 273 TSLNLSNCSQLTDEGISSLSTLVKLRHLEIANVGEVTDQGFLALAPLVNLVTLDVAGCYN 332
Query: 192 VTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFS 249
+TD+G L KL NL C + A + +L + +LN +C +++D G +
Sbjct: 333 ITDAGTEVLVNFPKLASCNLWYCSEIGDATFQHMESLTKMRFLNFMKCGKVTDRGLRSIA 392
Query: 250 KIGSLKVLNLG--FNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLE 306
K+ +L L++ FN +TDE L L L L+SL L C GI DEG+ L+ L +L L+
Sbjct: 393 KLRNLTSLDMVSCFN-VTDEGLNELSKLNRLKSLYLGGCSGIRDEGIAALSHLSSLVILD 451
Query: 307 LSD-TQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNLD-------- 356
LS+ QVG+ L + L NL ++NL I D + LAGL+ LK+LNL
Sbjct: 452 LSNCRQVGNKALLGIGALRNLTNLNLMRCNRIDDDGIAHLAGLTRLKTLNLANCRLLTDR 511
Query: 357 ------------------ARQITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKN 397
++TD G+ L++LT L +DL +++TD+ N N
Sbjct: 512 ATKTVAQMTGLESLVLWYCNKLTDAGILNLSTLTKLQSIDLASCSKLTDASLEAFLNMPN 571
Query: 398 LRSLEICG-------GGLTDAGLTGLVSLNVSN-SRITSAGLRHLKPLKNLRSLTLESC- 448
L SL++ G LT + +T L SLN+S IT GL HLK L NL S+ L C
Sbjct: 572 LTSLDLGNCCLLSDEGMLTLSKVTSLTSLNLSECGEITDTGLEHLKTLVNLSSVNLWYCT 631
Query: 449 KVTANDIKRL--QSRDL 463
KVT I L QS D
Sbjct: 632 KVTPVGINFLPVQSVDF 648
>gi|383455271|ref|YP_005369260.1| hypothetical protein COCOR_03284 [Corallococcus coralloides DSM
2259]
gi|380733131|gb|AFE09133.1| leucine-rich repeat-containing protein [Corallococcus coralloides
DSM 2259]
Length = 614
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 141/408 (34%), Positives = 206/408 (50%), Gaps = 11/408 (2%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+S++S+ LS + + D L L + + LQ+L + +++D GL L+G+ +L L
Sbjct: 129 TSVVSLHLSETALGDEHLAALANATRLQALHLD-GTRVTDAGLASLQGMPHLAVLRLD-A 186
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
A++ +G+ A L L +L L + GL L +LE L++ + D+ + L
Sbjct: 187 TAVSDRGLALLASLTTLRRLSLSGTSVSPRGLGLLAAQTELEWLDLS-DTTVDDTVLASL 245
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
G L++L +S + VT++G+ L+ + L L L V+ A L L AL L L+L
Sbjct: 246 PG-ERLRTLVMSGTHVTNAGLGALRRMPALRWLGLARTSVSDAGLAHLGALRMLDALHLG 304
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
++D G +++ +L+VL L I + HL GLT LE L+LD IG+ L +L
Sbjct: 305 STGVTDAGLIHLARLPALRVLVLSKTRIRGPGVRHLAGLTQLEVLHLDDTSIGNAALRHL 364
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
GL +L+ LELS T V SGL LSGL LES+ LS + D SL L L L L+L
Sbjct: 365 QGLQHLRDLELSRTAVTGSGLPALSGLQALESLGLSGLALEDASLAALEPLERLSRLDLS 424
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG---- 412
A +I L L S L HLDL D A L+ F L+SL LTD G
Sbjct: 425 ATRIGPEALKQLGSRMVLRHLDLSRTDFNDGWVATLQTFTQLQSLRAIRTILTDLGLGQL 484
Query: 413 --LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
L L SL VS + I+ +GL L+ L +L L L +T +D RL
Sbjct: 485 SELRELESLQVSGNPISGSGLVPLQKLPHLVKLDLGGTWMT-DDGARL 531
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 186/392 (47%), Gaps = 8/392 (2%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
LSG+ V+ GL L + L+ LD + + D L L G L +L + +T G
Sbjct: 208 LSGTSVSPRGLGLLAAQTELEWLDLSDTT-VDDTVLASLPG-ERLRTLVMSGTH-VTNAG 264
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+ A + L L L R + GL +L L L++L++ +TD+ + L+ L L+
Sbjct: 265 LGALRRMPALRWLGLARTSVSDAGLAHLGALRMLDALHLG-STGVTDAGLIHLARLPALR 323
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
L +S +++ G+ +L GL +L +L+L+ + A L L L L L L+R ++
Sbjct: 324 VLVLSKTRIRGPGVRHLAGLTQLEVLHLDDTSIGNAALRHLQGLQHLRDLELSRTAVTGS 383
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
G S + +L+ L L + D L L+ L L L+L + IG E L L L+
Sbjct: 384 GLPALSGLQALESLGLSGLALEDASLAALEPLERLSRLDLSATRIGPEALKQLGSRMVLR 443
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
L+LS T + L T L+S+ T ++D L +L+ L L+SL + I+ +
Sbjct: 444 HLDLSRTDFNDGWVATLQTFTQLQSLRAIRTILTDLGLGQLSELRELESLQVSGNPISGS 503
Query: 364 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT----GLVSL 419
GL L L L LDL G +TD GA L F+ L L + G + D L L++L
Sbjct: 504 GLVPLQKLPHLVKLDLGGTWMTDDGARLLAGFEKLSWLSLAGTRIGDESLVHLPGSLLTL 563
Query: 420 NVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
+ +++T AG+ L L LR + L V+
Sbjct: 564 YLLRTKVTDAGMPALHRLPLLREIDLRETAVS 595
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 183/396 (46%), Gaps = 57/396 (14%)
Query: 47 KWMD---------VIAS-QGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISD 96
+W+D V+AS G L ++ +SG+ VT++GL L+ L+ L +SD
Sbjct: 228 EWLDLSDTTVDDTVLASLPGERLRTLVMSGTHVTNAGLGALRRMPALRWLGLART-SVSD 286
Query: 97 GGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC-----TRIHG-GLVN 150
GL HL L L +L A GLI+L +L R TRI G G+ +
Sbjct: 287 AGLAHLGALRMLDALHLGSTGVTDA-------GLIHLARLPALRVLVLSKTRIRGPGVRH 339
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
L GL +LE L++ I ++ ++ L GL +L+ L++S + VT SG+ L GLQ L L
Sbjct: 340 LAGLTQLEVLHLD-DTSIGNAALRHLQGLQHLRDLELSRTAVTGSGLPALSGLQALESLG 398
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN------LGFNE- 263
L G + A L +L L L L+L+ ++ G E ++GS VL FN+
Sbjct: 399 LSGLALEDASLAALEPLERLSRLDLSATRI---GPEALKQLGSRMVLRHLDLSRTDFNDG 455
Query: 264 --------------------ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
+TD L L L LESL + I GLV L L +L
Sbjct: 456 WVATLQTFTQLQSLRAIRTILTDLGLGQLSELRELESLQVSGNPISGSGLVPLQKLPHLV 515
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
L+L T + G R L+G L ++L+ T I D SL L G SL +L L ++TD
Sbjct: 516 KLDLGGTWMTDDGARLLAGFEKLSWLSLAGTRIGDESLVHLPG--SLLTLYLLRTKVTDA 573
Query: 364 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
G+ AL L L +DL ++++ A L LR
Sbjct: 574 GMPALHRLPLLREIDLRETAVSEAARATLVREHGLR 609
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 153/302 (50%), Gaps = 7/302 (2%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
+ D + L+ T L++L + ++VTD+G+A L+G+ L +L L+ V+ L L+
Sbjct: 139 TALGDEHLAALANATRLQALHLDGTRVTDAGLASLQGMPHLAVLRLDATAVSDRGLALLA 198
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
+L +L L+L+ +S G + L+ L+L + D L L G L +L +
Sbjct: 199 SLTTLRRLSLSGTSVSPRGLGLLAAQTELEWLDLSDTTVDDTVLASLPG-ERLRTLVMSG 257
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
+ + GL L + L+ L L+ T V +GL HL L L++++L TG++D L LA
Sbjct: 258 THVTNAGLGALRRMPALRWLGLARTSVSDAGLAHLGALRMLDALHLGSTGVTDAGLIHLA 317
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE--- 402
L +L+ L L +I G+ L LT L L L I ++ +L+ ++LR LE
Sbjct: 318 RLPALRVLVLSKTRIRGPGVRHLAGLTQLEVLHLDDTSIGNAALRHLQGLQHLRDLELSR 377
Query: 403 --ICGGGLTD-AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
+ G GL +GL L SL +S + A L L+PL+ L L L + ++ +K+L
Sbjct: 378 TAVTGSGLPALSGLQALESLGLSGLALEDASLAALEPLERLSRLDLSATRIGPEALKQLG 437
Query: 460 SR 461
SR
Sbjct: 438 SR 439
>gi|406835014|ref|ZP_11094608.1| hypothetical protein SpalD1_25335 [Schlesneria paludicola DSM
18645]
Length = 497
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 135/423 (31%), Positives = 214/423 (50%), Gaps = 14/423 (3%)
Query: 26 EAFRDCALQDLCLGQYPGVNDKWMDVIA--SQGSSLLSVDLSGSDVTDSGLIHLKDCSNL 83
EA + + + N+K ++++ S ++L+ + S +T + L L NL
Sbjct: 70 EALPGRPVTTIYFDGHGKFNEKHLNLLMPFSHLTTLVFSNFKSSQITSARLSDLSGLKNL 129
Query: 84 QSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTR 143
SL F +IS+ G+ L+ L NLT+LS + +T G++ + L L L +
Sbjct: 130 TSLHFE-NTEISNEGIHELQELKNLTTLSLHTTH-VTDAGLRNLREVSKLTTLSLSGNSI 187
Query: 144 IHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGL 203
G L L L SL+++ N I D + +S L NLK+L + +TDS + L+ +
Sbjct: 188 SDDGFKELGELKHLSSLSLRLEN-IDDVQLDEISKLENLKTLSLHVPSITDSELKQLRTV 246
Query: 204 QKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL-GFN 262
+ LT L L +T A L L L +L L+L+ Q++D G ++ ++ +L L L G
Sbjct: 247 KNLTKLFLINSKITDAGLKPLLDLKNLTDLDLSSTQITDAGLKEIGQLENLTSLYLEGCG 306
Query: 263 EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG 322
ITD L+ + NL+ L L CGI D G+ L L +L+ L+LS T + G++ + G
Sbjct: 307 GITDVGFRELRNIKNLKRLALARCGITDLGMKGLGQLKSLELLDLSRTPITDHGIQEIGG 366
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
LTNL ++ L + I+D LR++ GL +LK L L + ITD G+ L + L L
Sbjct: 367 LTNLSTLWLLGSNITDLGLREINGLENLKELYLKSAFITDAGMKELGKFHNMNMLHLIQC 426
Query: 383 R-ITDSGAAYLRNFKNLRSLEICG-GGLTDAGL------TGLVSLNVSNSRITSAGLRHL 434
ITD+G LR+ K L E+ G +TDAG+ L LNV +++T +G+ L
Sbjct: 427 DGITDAGLKELRDLKKLSMFELYGCRNVTDAGIDELKEHKQLTILNVGATQVTVSGVNKL 486
Query: 435 KPL 437
K L
Sbjct: 487 KEL 489
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 130/391 (33%), Positives = 187/391 (47%), Gaps = 27/391 (6%)
Query: 77 LKDCSNLQSLDF-NF-CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLV 134
L S+L +L F NF QI+ L L GL NLTSL F N I+ +G+ L NL
Sbjct: 96 LMPFSHLTTLVFSNFKSSQITSARLSDLSGLKNLTSLHFE-NTEISNEGIHELQELKNLT 154
Query: 135 KLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD 194
L L GL NL+ + KL +L++ N I+D K L L +L SL + + D
Sbjct: 155 TLSLHTTHVTDAGLRNLREVSKLTTLSLSG-NSISDDGFKELGELKHLSSLSLRLENIDD 213
Query: 195 SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSL 254
+ + L+ L L+L +T + L L + +L L L +++D G + + +L
Sbjct: 214 VQLDEISKLENLKTLSLHVPSITDSELKQLRTVKNLTKLFLINSKITDAGLKPLLDLKNL 273
Query: 255 KVLNLGFNEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQVG 313
L+L +ITD L + L NL SL L+ CG I D G L + NLK L L+ +
Sbjct: 274 TDLDLSSTQITDAGLKEIGQLENLTSLYLEGCGGITDVGFRELRNIKNLKRLALARCGIT 333
Query: 314 SSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 373
G++ L L +LE ++LS T I+D ++++ GL++L +L L ITD GL + L
Sbjct: 334 DLGMKGLGQLKSLELLDLSRTPITDHGIQEIGGLTNLSTLWLLGSNITDLGLREINGLEN 393
Query: 374 LTHLDLFGARITDSGAAYLRNFKNLRSLEI--CGGGLTDAGLTGLVSLNVSNSRITSAGL 431
L L L A ITD+G L F N+ L + C G IT AGL
Sbjct: 394 LKELYLKSAFITDAGMKELGKFHNMNMLHLIQCDG-------------------ITDAGL 434
Query: 432 RHLKPLKNLRSLTLESCK-VTANDIKRLQSR 461
+ L+ LK L L C+ VT I L+
Sbjct: 435 KELRDLKKLSMFELYGCRNVTDAGIDELKEH 465
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 161/335 (48%), Gaps = 34/335 (10%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
IT + + LSGL NL SL +++++ GI L+ L+ LT L+L VT A L +L +
Sbjct: 115 ITSARLSDLSGLKNLTSLHFENTEISNEGIHELQELKNLTTLSLHTTHVTDAGLRNLREV 174
Query: 228 GSLFYLNLNRCQLSDDG------------------------CEKFSKIGSLKVLNLGFNE 263
L L+L+ +SDDG ++ SK+ +LK L+L
Sbjct: 175 SKLTTLSLSGNSISDDGFKELGELKHLSSLSLRLENIDDVQLDEISKLENLKTLSLHVPS 234
Query: 264 ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL 323
ITD L L+ + NL L L + I D GL L L NL L+LS TQ+ +GL+ + L
Sbjct: 235 ITDSELKQLRTVKNLTKLFLINSKITDAGLKPLLDLKNLTDLDLSSTQITDAGLKEIGQL 294
Query: 324 TNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
NL S+ L GI+D R+L + +LK L L ITD G+ L L L LDL
Sbjct: 295 ENLTSLYLEGCGGITDVGFRELRNIKNLKRLALARCGITDLGMKGLGQLKSLELLDLSRT 354
Query: 383 RITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKP 436
ITD G + NL +L + G +TD GL L L + ++ IT AG++ L
Sbjct: 355 PITDHGIQEIGGLTNLSTLWLLGSNITDLGLREINGLENLKELYLKSAFITDAGMKELGK 414
Query: 437 LKNLRSLTLESCK-VTANDIKRLQSRDLPNLVSFR 470
N+ L L C +T +K L RDL L F
Sbjct: 415 FHNMNMLHLIQCDGITDAGLKEL--RDLKKLSMFE 447
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 100/218 (45%), Gaps = 30/218 (13%)
Query: 261 FNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
FNE L+ LT L N S I L +L+GL NL L +T++ + G+ L
Sbjct: 88 FNEKHLNLLMPFSHLTTLVFSNFKSSQITSARLSDLSGLKNLTSLHFENTEISNEGIHEL 147
Query: 321 SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL------------ 368
L NL +++L T ++D LR L +S L +L+L I+D G L
Sbjct: 148 QELKNLTTLSLHTTHVTDAGLRNLREVSKLTTLSLSGNSISDDGFKELGELKHLSSLSLR 207
Query: 369 ------------TSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG---- 412
+ L L L L ITDS LR KNL L + +TDAG
Sbjct: 208 LENIDDVQLDEISKLENLKTLSLHVPSITDSELKQLRTVKNLTKLFLINSKITDAGLKPL 267
Query: 413 --LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
L L L++S+++IT AGL+ + L+NL SL LE C
Sbjct: 268 LDLKNLTDLDLSSTQITDAGLKEIGQLENLTSLYLEGC 305
>gi|59802561|gb|AAX07517.1| putative regulatory subunit [Gemmata sp. Wa1-1]
Length = 402
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 161/290 (55%), Gaps = 2/290 (0%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
R +LT L+ R +T G+K L L LDL R GL L+GL L + I
Sbjct: 115 RDFISLTGLNLRFTK-VTDLGLKEMRSLSKLTVLDLGRTKVTDAGLQELRGLTNLTTW-I 172
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
+ +TD+ +K LSGL NL L + +KVT G+ LKGL LT L+L G T A L
Sbjct: 173 SAPHEVTDAGLKELSGLANLTELNLRFTKVTYLGLKELKGLTNLTSLDLFGTSTTDASLA 232
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
L L +L LNL+ +++D G ++ + + +L L+L F ++TD L LKGL+NL L+
Sbjct: 233 ELKGLTNLTELNLSDTKVTDAGLQELTGLANLASLDLRFTKVTDAGLQKLKGLSNLAVLD 292
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
L + D GL L L L L+L T+V +GL+ L+GL NL S++L T ++D L+
Sbjct: 293 LFGTSVTDAGLKELGRLSKLTVLDLGSTKVTGTGLKELTGLANLTSLHLRLTAVTDAGLK 352
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
+L+GL++L SL+L ++DT L L L+ LT L L +TD G L
Sbjct: 353 ELSGLANLTSLDLFGTPVSDTDLKELKKLSKLTSLRLGRTAVTDVGIKEL 402
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 147/274 (53%), Gaps = 18/274 (6%)
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
+L L + +KVTD G+ ++ L KLT+L+L VT A L L L +L ++
Sbjct: 119 SLTGLNLRFTKVTDLGLKEMRSLSKLTVLDLGRTKVTDAGLQELRGLTNLTTWISAPHEV 178
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
+D G ++ S + +L LNL F ++T L LKGLTNL SL+L D L L GL
Sbjct: 179 TDAGLKELSGLANLTELNLRFTKVTYLGLKELKGLTNLTSLDLFGTSTTDASLAELKGLT 238
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
NL L LSDT+V +GL+ L+GL NL S++L FT ++D L+KL GLS+L L+L +
Sbjct: 239 NLTELNLSDTKVTDAGLQELTGLANLASLDLRFTKVTDAGLQKLKGLSNLAVLDLFGTSV 298
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLN 420
TD GL L L+ LT LDL ++T +G L GL L SL+
Sbjct: 299 TDAGLKELGRLSKLTVLDLGSTKVTGTGLKEL------------------TGLANLTSLH 340
Query: 421 VSNSRITSAGLRHLKPLKNLRSLTLESCKVTAND 454
+ + +T AGL+ L L NL SL L V+ D
Sbjct: 341 LRLTAVTDAGLKELSGLANLTSLDLFGTPVSDTD 374
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/287 (36%), Positives = 155/287 (54%), Gaps = 7/287 (2%)
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
+ L LN+++ +TD +K + L+ L L + +KVTD+G+ L+GL LT
Sbjct: 117 FISLTGLNLRFTK-VTDLGLKEMRSLSKLTVLDLGRTKVTDAGLQELRGLTNLTTWISAP 175
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
VT A L LS L +L LNL +++ G ++ + +L L+L TD L LK
Sbjct: 176 HEVTDAGLKELSGLANLTELNLRFTKVTYLGLKELKGLTNLTSLDLFGTSTTDASLAELK 235
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
GLTNL LNL + D GL LTGL NL L+L T+V +GL+ L GL+NL ++L
Sbjct: 236 GLTNLTELNLSDTKVTDAGLQELTGLANLASLDLRFTKVTDAGLQKLKGLSNLAVLDLFG 295
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
T ++D L++L LS L L+L + ++T TGL LT L LT L L +TD+G L
Sbjct: 296 TSVTDAGLKELGRLSKLTVLDLGSTKVTGTGLKELTGLANLTSLHLRLTAVTDAGLKELS 355
Query: 394 NFKNLRSLEICGGGLTDA------GLTGLVSLNVSNSRITSAGLRHL 434
NL SL++ G ++D L+ L SL + + +T G++ L
Sbjct: 356 GLANLTSLDLFGTPVSDTDLKELKKLSKLTSLRLGRTAVTDVGIKEL 402
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 151/288 (52%), Gaps = 27/288 (9%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
S L +DL + VTD+GL L+ +NL + + +++D GL+ L GL+NLT L+ R
Sbjct: 142 SKLTVLDLGRTKVTDAGLQELRGLTNLTTW-ISAPHEVTDAGLKELSGLANLTELNLRFT 200
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+T G+K GL NL LDL + L LKGL L LN+ +TD+ ++ L
Sbjct: 201 K-VTYLGLKELKGLTNLTSLDLFGTSTTDASLAELKGLTNLTELNLSDTK-VTDAGLQEL 258
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+GL NL SL + +KVTD+G+ LKGL L +L+L G VT
Sbjct: 259 TGLANLASLDLRFTKVTDAGLQKLKGLSNLAVLDLFGTSVT------------------- 299
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
D G ++ ++ L VL+LG ++T L L GL NL SL+L + D GL L
Sbjct: 300 -----DAGLKELGRLSKLTVLDLGSTKVTGTGLKELTGLANLTSLHLRLTAVTDAGLKEL 354
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
+GL NL L+L T V + L+ L L+ L S+ L T ++D +++L
Sbjct: 355 SGLANLTSLDLFGTPVSDTDLKELKKLSKLTSLRLGRTAVTDVGIKEL 402
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 99/183 (54%), Gaps = 18/183 (9%)
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
+L LNL + D GL + L L L+L T+V +GL+ L GLTNL + + +
Sbjct: 119 SLTGLNLRFTKVTDLGLKEMRSLSKLTVLDLGRTKVTDAGLQELRGLTNLTTWISAPHEV 178
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
+D L++L+GL++L LNL ++T GL L LT LT LDLFG TD+ A L+
Sbjct: 179 TDAGLKELSGLANLTELNLRFTKVTYLGLKELKGLTNLTSLDLFGTSTTDASLAELK--- 235
Query: 397 NLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIK 456
GLT L LN+S++++T AGL+ L L NL SL L KVT ++
Sbjct: 236 ---------------GLTNLTELNLSDTKVTDAGLQELTGLANLASLDLRFTKVTDAGLQ 280
Query: 457 RLQ 459
+L+
Sbjct: 281 KLK 283
>gi|348688896|gb|EGZ28710.1| hypothetical protein PHYSODRAFT_322345 [Phytophthora sojae]
Length = 683
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 138/403 (34%), Positives = 206/403 (51%), Gaps = 30/403 (7%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
++TD G+ L ++L SL+ + C Q++D G+ L L NL L F +T G+KA
Sbjct: 292 NLTDDGISALAGVTSLTSLNLSNCSQLTDVGISSLGALVNLRHLEFANVGEVTDNGLKAL 351
Query: 128 AGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
A L++L+ LD+ C I G L L S N+ +C+ I D+ + + LT ++ L
Sbjct: 352 APLVDLITLDIAGCYNITDAGTSVLANFPNLSSCNLWYCSEIGDTTFEHMESLTKMRFLN 411
Query: 187 -ISCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQ-LSDD 243
+ C KVTD G+ + L+ LT L++ C VT L+ L L L L L C + DD
Sbjct: 412 FMKCGKVTDKGLRSISKLRNLTSLDMVSCFNVTDDGLNELVGLHRLKSLYLGGCSGIRDD 471
Query: 244 GCEKFSKIGSLKVLNLG-FNEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCN 301
G S++ SL +L+L ++ ++ L+ L L NL +LNL C I DEG+ L GL
Sbjct: 472 GIAALSQLKSLVILDLSNCRQVGNKALLGLGELHNLTNLNLMRCNRIDDEGIAYLAGLKR 531
Query: 302 LKCLELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-R 358
LK L LS+ + + + ++ +T LESI L + ++D + LA L+ L+S++L +
Sbjct: 532 LKTLNLSNCRLLTDAATTTIAQMTELESIVLWYCNKLTDTGVMNLASLTKLQSIDLASCS 591
Query: 359 QITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLV 417
++TD L+ S+ LT LDL +TD G A L +T L
Sbjct: 592 KLTDACLSTFPSIPKLTSLDLGNCCLLTDEGMATL------------------GKVTSLT 633
Query: 418 SLNVSN-SRITSAGLRHLKPLKNLRSLTLESC-KVTANDIKRL 458
SLN+S IT AGL HL L NL ++ L C KVT I L
Sbjct: 634 SLNLSECGEITDAGLAHLAALVNLTNINLWYCTKVTKTGIDHL 676
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 145/274 (52%), Gaps = 7/274 (2%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
S++ D+ H++ + ++ L+F C +++D GL + L NLTSL +T G+
Sbjct: 391 SEIGDTTFEHMESLTKMRFLNFMKCGKVTDKGLRSISKLRNLTSLDMVSCFNVTDDGLNE 450
Query: 127 FAGLINLVKLDLERCTRIH-GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
GL L L L C+ I G+ L L L L++ C + + + L L NL +L
Sbjct: 451 LVGLHRLKSLYLGGCSGIRDDGIAALSQLKSLVILDLSNCRQVGNKALLGLGELHNLTNL 510
Query: 186 Q-ISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QLSD 242
+ C+++ D GIAYL GL++L LNL C +T A +++ + L + L C +L+D
Sbjct: 511 NLMRCNRIDDEGIAYLAGLKRLKTLNLSNCRLLTDAATTTIAQMTELESIVLWYCNKLTD 570
Query: 243 DGCEKFSKIGSLKVLNLG-FNEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLC 300
G + + L+ ++L +++TD CL + L SL+L +C + DEG+ L +
Sbjct: 571 TGVMNLASLTKLQSIDLASCSKLTDACLSTFPSIPKLTSLDLGNCCLLTDEGMATLGKVT 630
Query: 301 NLKCLELSDT-QVGSSGLRHLSGLTNLESINLSF 333
+L L LS+ ++ +GL HL+ L NL +INL +
Sbjct: 631 SLTSLNLSECGEITDAGLAHLAALVNLTNINLWY 664
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 201/439 (45%), Gaps = 55/439 (12%)
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE-- 139
NL+ ++ C ++D +E L + + S++ + +T +G+ A ++ L
Sbjct: 176 NLKEVNLTGCSNLTDESVEQLAQIPRMESIALKGCYQVTDKGIIALTESLSSSLTSLNLG 235
Query: 140 RCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK---VTD 194
C + V+ L KL L+++ C+ + D ++ L+ L +L +L + + +TD
Sbjct: 236 YCKVVSDEAVSAIAANLPKLNYLSLRGCSQVGDIGIRELARLKHLTTLNLWYANQGNLTD 295
Query: 195 SGIAYLKGLQKLTLLNLEGC--------------------------PVTAACLDSLSALG 228
GI+ L G+ LT LNL C VT L +L+ L
Sbjct: 296 DGISALAGVTSLTSLNLSNCSQLTDVGISSLGALVNLRHLEFANVGEVTDNGLKALAPLV 355
Query: 229 SLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC 286
L L++ C ++D G + +L NL + +EI D H++ LT + LN C
Sbjct: 356 DLITLDIAGCYNITDAGTSVLANFPNLSSCNLWYCSEIGDTTFEHMESLTKMRFLNFMKC 415
Query: 287 G-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRK 343
G + D+GL +++ L NL L++ S V GL L GL L+S+ L +GI D +
Sbjct: 416 GKVTDKGLRSISKLRNLTSLDMVSCFNVTDDGLNELVGLHRLKSLYLGGCSGIRDDGIAA 475
Query: 344 LAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSL 401
L+ L SL L+L + RQ+ + L L L LT+L+L RI D G AYL K L++L
Sbjct: 476 LSQLKSLVILDLSNCRQVGNKALLGLGELHNLTNLNLMRCNRIDDEGIAYLAGLKRLKTL 535
Query: 402 EICGGG-LTDAGLTGLVSLNVSNS-------RITSAGLRHLKPLKNLRSLTLESCK---- 449
+ LTDA T + + S ++T G+ +L L L+S+ L SC
Sbjct: 536 NLSNCRLLTDAATTTIAQMTELESIVLWYCNKLTDTGVMNLASLTKLQSIDLASCSKLTD 595
Query: 450 ---VTANDIKRLQSRDLPN 465
T I +L S DL N
Sbjct: 596 ACLSTFPSIPKLTSLDLGN 614
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 110/223 (49%), Gaps = 26/223 (11%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
S + D G+ L +L LD + C Q+ + L L L NLT+L+ R N I +G+
Sbjct: 466 SGIRDDGIAALSQLKSLVILDLSNCRQVGNKALLGLGELHNLTNLNLMRCNRIDDEGIAY 525
Query: 127 FAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
AGL L L+L C + + + +LES+ + +CN +TD+ + L+ LT L+S+
Sbjct: 526 LAGLKRLKTLNLSNCRLLTDAATTTIAQMTELESIVLWYCNKLTDTGVMNLASLTKLQSI 585
Query: 186 QI-SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
+ SCSK+TD+ ++ + KLT L+L C C L+D+G
Sbjct: 586 DLASCSKLTDACLSTFPSIPKLTSLDLGNC-----------------------CLLTDEG 622
Query: 245 CEKFSKIGSLKVLNLG-FNEITDECLVHLKGLTNLESLNLDSC 286
K+ SL LNL EITD L HL L NL ++NL C
Sbjct: 623 MATLGKVTSLTSLNLSECGEITDAGLAHLAALVNLTNINLWYC 665
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 57 SSLLSVDL-SGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
+ L S+DL S S +TD+ L L SLD C ++D G+ L +++LTSL+
Sbjct: 580 TKLQSIDLASCSKLTDACLSTFPSIPKLTSLDLGNCCLLTDEGMATLGKVTSLTSLNLSE 639
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRI 144
IT G+ A L+NL ++L CT++
Sbjct: 640 CGEITDAGLAHLAALVNLTNINLWYCTKV 668
>gi|46447562|ref|YP_008927.1| hypothetical protein pc1928 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401203|emb|CAF24652.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 528
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 184/340 (54%), Gaps = 33/340 (9%)
Query: 65 SGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+ +TD+ LK+C NL++L F C ++D GL HL+ L+ L L+
Sbjct: 203 ENTHLTDAHFSVLKECKNLKALHFEACQILTDAGLAHLKPLTALQHLN------------ 250
Query: 125 KAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
+G +L + GL +L L L+ L++ C TD + L+ LT L+
Sbjct: 251 --LSGCYHLTDV----------GLAHLTFLTGLQHLDLSQCWHFTDDGLAHLTSLTALQY 298
Query: 185 LQ-ISCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQ-LS 241
L + C + D+G+A+LK L L LNL GC +T A L L+ L L +LNL++C+ L+
Sbjct: 299 LALMGCKNLIDAGLAHLKPLTSLQHLNLRGCGYLTDAGLAHLAPLTGLQHLNLSKCENLT 358
Query: 242 DDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGL 299
D G + +L+ LNL ++TD+ L HL +TNL+ L+L C + D GL +LT L
Sbjct: 359 DVGLAHLRLLVALQYLNLDNCRKLTDDGLAHLTPVTNLQHLDLSQCWHLTDIGLAHLTPL 418
Query: 300 CNLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL-D 356
+L+ L+LS + + GL HL+ LT L+ ++LS+ ++D L L L++L+ L+L
Sbjct: 419 KSLQHLDLSRCENLTDDGLVHLTPLTALQHLDLSYCYNLTDDGLAHLTPLTTLQHLDLMG 478
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGAR-ITDSGAAYLRNF 395
+ +TD GLA LT L L +LDL G + TD G A +N
Sbjct: 479 CKNLTDDGLAHLTPLIALQYLDLIGCKNFTDDGLARFKNL 518
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 122/326 (37%), Positives = 172/326 (52%), Gaps = 11/326 (3%)
Query: 108 LTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCN 166
+ L+F N +T NL L E C + GL +LK L L+ LN+ C
Sbjct: 196 IKKLNFSENTHLTDAHFSVLKECKNLKALHFEACQILTDAGLAHLKPLTALQHLNLSGCY 255
Query: 167 CITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSL 224
+TD + L+ LT L+ L +S C TD G+A+L L L L L GC + A L L
Sbjct: 256 HLTDVGLAHLTFLTGLQHLDLSQCWHFTDDGLAHLTSLTALQYLALMGCKNLIDAGLAHL 315
Query: 225 SALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNE-ITDECLVHLKGLTNLESLN 282
L SL +LNL C L+D G + + L+ LNL E +TD L HL+ L L+ LN
Sbjct: 316 KPLTSLQHLNLRGCGYLTDAGLAHLAPLTGLQHLNLSKCENLTDVGLAHLRLLVALQYLN 375
Query: 283 LDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDG 339
LD+C + D+GL +LT + NL+ L+LS + GL HL+ L +L+ ++LS ++D
Sbjct: 376 LDNCRKLTDDGLAHLTPVTNLQHLDLSQCWHLTDIGLAHLTPLKSLQHLDLSRCENLTDD 435
Query: 340 SLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGAR-ITDSGAAYLRNFKN 397
L L L++L+ L+L +TD GLA LT LT L HLDL G + +TD G A+L
Sbjct: 436 GLVHLTPLTALQHLDLSYCYNLTDDGLAHLTPLTTLQHLDLMGCKNLTDDGLAHLTPLIA 495
Query: 398 LRSLEICG-GGLTDAGLTGLVSLNVS 422
L+ L++ G TD GL +L S
Sbjct: 496 LQYLDLIGCKNFTDDGLARFKNLAAS 521
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/314 (36%), Positives = 160/314 (50%), Gaps = 38/314 (12%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
+++ LN +TD+ L NLK+L +C +TD+G+A+LK L L LNL GC
Sbjct: 195 EIKKLNFSENTHLTDAHFSVLKECKNLKALHFEACQILTDAGLAHLKPLTALQHLNLSGC 254
Query: 215 -PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVH 271
+T L L+ L L +L+L++C +DDG + + +L+ L L G + D L H
Sbjct: 255 YHLTDVGLAHLTFLTGLQHLDLSQCWHFTDDGLAHLTSLTALQYLALMGCKNLIDAGLAH 314
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
LK LT+L+ LNL CG L+D +GL HL+ LT L+ +NL
Sbjct: 315 LKPLTSLQHLNLRGCGY------------------LTD-----AGLAHLAPLTGLQHLNL 351
Query: 332 SF-TGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLTGLTHLDLFGA-RITDSG 388
S ++D L L L +L+ LNLD R++TD GLA LT +T L HLDL +TD G
Sbjct: 352 SKCENLTDVGLAHLRLLVALQYLNLDNCRKLTDDGLAHLTPVTNLQHLDLSQCWHLTDIG 411
Query: 389 AAYLRNFKNLRSLEICG-GGLTDAGLTGLVSLNVSNS-------RITSAGLRHLKPLKNL 440
A+L K+L+ L++ LTD GL L L +T GL HL PL L
Sbjct: 412 LAHLTPLKSLQHLDLSRCENLTDDGLVHLTPLTALQHLDLSYCYNLTDDGLAHLTPLTTL 471
Query: 441 RSLTLESCKVTAND 454
+ L L CK +D
Sbjct: 472 QHLDLMGCKNLTDD 485
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 109/202 (53%), Gaps = 5/202 (2%)
Query: 57 SSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
+SL ++L G +TD+GL HL + LQ L+ + C ++D GL HLR L L L+
Sbjct: 319 TSLQHLNLRGCGYLTDAGLAHLAPLTGLQHLNLSKCENLTDVGLAHLRLLVALQYLNLDN 378
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMK 174
+T G+ + NL LDL +C + GL +L L L+ L++ C +TD +
Sbjct: 379 CRKLTDDGLAHLTPVTNLQHLDLSQCWHLTDIGLAHLTPLKSLQHLDLSRCENLTDDGLV 438
Query: 175 PLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFY 232
L+ LT L+ L +S C +TD G+A+L L L L+L GC +T L L+ L +L Y
Sbjct: 439 HLTPLTALQHLDLSYCYNLTDDGLAHLTPLTTLQHLDLMGCKNLTDDGLAHLTPLIALQY 498
Query: 233 LNLNRCQ-LSDDGCEKFSKIGS 253
L+L C+ +DDG +F + +
Sbjct: 499 LDLIGCKNFTDDGLARFKNLAA 520
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD GL HL +NLQ LD + C ++D GL HL L +L L R +T G+
Sbjct: 382 LTDDGLAHLTPVTNLQHLDLSQCWHLTDIGLAHLTPLKSLQHLDLSRCENLTDDGLVHLT 441
Query: 129 GLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ- 186
L L LDL C + GL +L L L+ L++ C +TD + L+ L L+ L
Sbjct: 442 PLTALQHLDLSYCYNLTDDGLAHLTPLTTLQHLDLMGCKNLTDDGLAHLTPLIALQYLDL 501
Query: 187 ISCSKVTDSGIAYLKGLQ---KLTLLN 210
I C TD G+A K L LT++N
Sbjct: 502 IGCKNFTDDGLARFKNLAASLNLTIIN 528
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 58 SLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
SL +DLS ++TD GL+HL + LQ LD ++C ++D GL HL L+ L L
Sbjct: 420 SLQHLDLSRCENLTDDGLVHLTPLTALQHLDLSYCYNLTDDGLAHLTPLTTLQHLDLMGC 479
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCN 166
+T G+ LI L LDL C GL K L SLN+ N
Sbjct: 480 KNLTDDGLAHLTPLIALQYLDLIGCKNFTDDGLARFKNLAA--SLNLTIIN 528
>gi|46446776|ref|YP_008141.1| hypothetical protein pc1142 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400417|emb|CAF23866.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 590
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 128/348 (36%), Positives = 190/348 (54%), Gaps = 13/348 (3%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
L + +T++ L+ LKDC N++ L F C ++D GL HL L+ L L +T G
Sbjct: 233 LENTHLTNAHLLALKDCKNVKVLYFKKCRDVTDAGLAHLTPLTALQHLGLSDCENLTDAG 292
Query: 124 MKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNL 182
+ L L LDL C + GLV+L L+ L+ L + C +T + + L+ LT L
Sbjct: 293 LAHLTTLTALQHLDLSGCWNLTDSGLVHLTPLVGLQHLGLSDCENLTVAGLAHLTSLTAL 352
Query: 183 KSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-Q 239
+ L + +C +TD+G+A+L L L L+L C +T A L L+ L +L +LNL C +
Sbjct: 353 QHLDLRNCYNLTDAGLAHLTPLTALQHLDLSCCYNLTDAGLAHLTPLTALQHLNLCCCRK 412
Query: 240 LSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLT 297
L+D G + + +L+ L+L + +TD L HL LT L LNL C + GL +LT
Sbjct: 413 LTDAGLAHLTPLTALQHLDLSYCYNLTDAGLAHLTPLTALLHLNLSECWKLTGAGLAHLT 472
Query: 298 GLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL 355
L L+ L LS + +GL HL+ LT L+ +NLS+ +D L L L++L+SL+L
Sbjct: 473 PLVALQHLNLSKCNNLTDAGLVHLAPLTALQHLNLSWCKKFTDAGLAHLTLLTALQSLDL 532
Query: 356 -DARQITDTGLAALTSLTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSL 401
+TD GL LT LT L +LDL G + +TD+G L FK L +L
Sbjct: 533 IGCNNLTDAGLVHLTPLTALQYLDLIGCKNLTDAG---LERFKTLAAL 577
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 150/482 (31%), Positives = 231/482 (47%), Gaps = 43/482 (8%)
Query: 3 PRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSV 62
P ++Q+ F L+ CLT E + + Y G+ + ++ S
Sbjct: 107 PLALTQKDFTLLL--NCLTNPKFEISLEEISSSIQFADYYGLTEVVKNLEEQLIDGYKSQ 164
Query: 63 DLSGSDVTDSGLIHLKDCSNLQS----------LDF-------NFCIQISDGG--LEHLR 103
+ T+ L+ LK+ N L+F N IQ+S+ + HL
Sbjct: 165 RFESFNSTEESLVELKELLNFAHRYQLNILRNYLEFTVVSALLNQTIQLSEFERIINHLS 224
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNI 162
+ + +L+F N +T + A N+ L ++C + GL +L L L+ L +
Sbjct: 225 --NKIEALNFLENTHLTNAHLLALKDCKNVKVLYFKKCRDVTDAGLAHLTPLTALQHLGL 282
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAAC 220
C +TD+ + L+ LT L+ L +S C +TDSG+ +L L L L L C +T A
Sbjct: 283 SDCENLTDAGLAHLTTLTALQHLDLSGCWNLTDSGLVHLTPLVGLQHLGLSDCENLTVAG 342
Query: 221 LDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLG--FNEITDECLVHLKGLTN 277
L L++L +L +L+L C L+D G + + +L+ L+L +N +TD L HL LT
Sbjct: 343 LAHLTSLTALQHLDLRNCYNLTDAGLAHLTPLTALQHLDLSCCYN-LTDAGLAHLTPLTA 401
Query: 278 LESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-T 334
L+ LNL C + D GL +LT L L+ L+LS + +GL HL+ LT L +NLS
Sbjct: 402 LQHLNLCCCRKLTDAGLAHLTPLTALQHLDLSYCYNLTDAGLAHLTPLTALLHLNLSECW 461
Query: 335 GISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL-FGARITDSGAAYL 392
++ L L L +L+ LNL +TD GL L LT L HL+L + + TD+G A+L
Sbjct: 462 KLTGAGLAHLTPLVALQHLNLSKCNNLTDAGLVHLAPLTALQHLNLSWCKKFTDAGLAHL 521
Query: 393 RNFKNLRSLEICG-GGLTDAGLTGLVSLN-------VSNSRITSAGLRHLKPLKNLRSLT 444
L+SL++ G LTDAGL L L + +T AGL K L L +LT
Sbjct: 522 TLLTALQSLDLIGCNNLTDAGLVHLTPLTALQYLDLIGCKNLTDAGLERFKTLAALPNLT 581
Query: 445 LE 446
++
Sbjct: 582 IK 583
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 157/311 (50%), Gaps = 42/311 (13%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGC 214
K+E+LN +T++ + L N+K L C VTD+G+A+L L L L L C
Sbjct: 226 KIEALNFLENTHLTNAHLLALKDCKNVKVLYFKKCRDVTDAGLAHLTPLTALQHLGLSDC 285
Query: 215 P-VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
+T A L L+ L +L +L+L+ C +TD LVHL
Sbjct: 286 ENLTDAGLAHLTTLTALQHLDLSGCW-----------------------NLTDSGLVHLT 322
Query: 274 GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINL 331
L L+ L L C + GL +LT L L+ L+L + + +GL HL+ LT L+ ++L
Sbjct: 323 PLVGLQHLGLSDCENLTVAGLAHLTSLTALQHLDLRNCYNLTDAGLAHLTPLTALQHLDL 382
Query: 332 SF-TGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL-FGARITDSG 388
S ++D L L L++L+ LNL R++TD GLA LT LT L HLDL + +TD+G
Sbjct: 383 SCCYNLTDAGLAHLTPLTALQHLNLCCCRKLTDAGLAHLTPLTALQHLDLSYCYNLTDAG 442
Query: 389 AAYLRNFKNLRSL------EICGGGLTDAGLTGLVSLNVSN----SRITSAGLRHLKPLK 438
A+L L L ++ G GL A LT LV+L N + +T AGL HL PL
Sbjct: 443 LAHLTPLTALLHLNLSECWKLTGAGL--AHLTPLVALQHLNLSKCNNLTDAGLVHLAPLT 500
Query: 439 NLRSLTLESCK 449
L+ L L CK
Sbjct: 501 ALQHLNLSWCK 511
>gi|46447552|ref|YP_008917.1| hypothetical protein pc1918 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401193|emb|CAF24642.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 552
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 178/342 (52%), Gaps = 13/342 (3%)
Query: 65 SGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+ + +TD+ L+ LK+C NL+ L C I+D GL HL L+ L L+ +T G+
Sbjct: 202 NNAHLTDAHLLTLKNCENLKVLHLEACQAITDDGLAHLAPLTALQHLNLNGCYKLTDAGL 261
Query: 125 KAFAGLINLVKLDLERCTRIH-GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
L L LDL C + GLV+LK L L++L + C +TD + L LT L+
Sbjct: 262 VHLKSLTALQTLDLSYCKNLKDAGLVHLKPLTALQNLALTSCKNLTDRGLSHLKSLTALQ 321
Query: 184 SLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QL 240
+L +S C D+G+A+L L L L+L C +T L L +L +L LNL+ C +L
Sbjct: 322 TLDLSYCKNFKDAGLAHLPPLTALQTLDLSYCKDLTDRGLSHLKSLTALQTLNLSYCKKL 381
Query: 241 SDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTG 298
D G + +L+ L L +TD L HLK L L+ L L C + D GL +L
Sbjct: 382 KDAGLAHLKPLTALQYLALNSCKNLTDRGLSHLKSLMALQHLVLSGCDNLTDAGLAHLKP 441
Query: 299 LCNLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLD 356
L L+ L L Q + GL HL+ LT L++++LS+ + D L L L++L++L L
Sbjct: 442 LTALQTLGLRRCQNLTGDGLAHLAPLTALQTLDLSYCKKLKDAGLAHLKPLTALQTLGLK 501
Query: 357 -ARQITDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFK 396
+TD GLA L L L HLDL + +T +G L NFK
Sbjct: 502 WCSNLTDAGLAHLKPLAALQHLDLSYCNNLTRAG---LANFK 540
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 191/356 (53%), Gaps = 21/356 (5%)
Query: 83 LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT 142
+++L+F+ ++D L L+ NL L AIT G+ A L L L+L C
Sbjct: 195 IEALNFSNNAHLTDAHLLTLKNCENLKVLHLEACQAITDDGLAHLAPLTALQHLNLNGCY 254
Query: 143 RI-HGGLVNLKGLMKLESLNIKWCNCITDS---DMKPLSGLTNLKSLQISCSKVTDSGIA 198
++ GLV+LK L L++L++ +C + D+ +KPL+ L NL SC +TD G++
Sbjct: 255 KLTDAGLVHLKSLTALQTLDLSYCKNLKDAGLVHLKPLTALQNLA--LTSCKNLTDRGLS 312
Query: 199 YLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKV 256
+LK L L L+L C A L L L +L L+L+ C+ L+D G + +L+
Sbjct: 313 HLKSLTALQTLDLSYCKNFKDAGLAHLPPLTALQTLDLSYCKDLTDRGLSHLKSLTALQT 372
Query: 257 LNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVG 313
LNL + ++ D L HLK LT L+ L L+SC + D GL +L L L+ L LS +
Sbjct: 373 LNLSYCKKLKDAGLAHLKPLTALQYLALNSCKNLTDRGLSHLKSLMALQHLVLSGCDNLT 432
Query: 314 SSGLRHLSGLTNLESINL----SFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAAL 368
+GL HL LT L+++ L + TG DG L LA L++L++L+L +++ D GLA L
Sbjct: 433 DAGLAHLKPLTALQTLGLRRCQNLTG--DG-LAHLAPLTALQTLDLSYCKKLKDAGLAHL 489
Query: 369 TSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGLVSLNVS 422
LT L L L + + +TD+G A+L+ L+ L++ LT AGL L S
Sbjct: 490 KPLTALQTLGLKWCSNLTDAGLAHLKPLAALQHLDLSYCNNLTRAGLANFKILGAS 545
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 118/335 (35%), Positives = 172/335 (51%), Gaps = 42/335 (12%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
++E+LN +TD+ + L NLK L + +C +TD G+A+L L L LNL GC
Sbjct: 194 EIEALNFSNNAHLTDAHLLTLKNCENLKVLHLEACQAITDDGLAHLAPLTALQHLNLNGC 253
Query: 215 -PVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNL-GFNEITDECLVH 271
+T A L L +L +L L+L+ C+ L D G + +L+ L L +TD L H
Sbjct: 254 YKLTDAGLVHLKSLTALQTLDLSYCKNLKDAGLVHLKPLTALQNLALTSCKNLTDRGLSH 313
Query: 272 LKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQ-VGSSGLRHLSGLTNLESI 329
LK LT L++L+L C D GL +L L L+ L+LS + + GL HL LT L+++
Sbjct: 314 LKSLTALQTLDLSYCKNFKDAGLAHLPPLTALQTLDLSYCKDLTDRGLSHLKSLTALQTL 373
Query: 330 NLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGA-RITD 386
NLS+ + D L L L++L+ L L++ + +TD GL+ L SL L HL L G +TD
Sbjct: 374 NLSYCKKLKDAGLAHLKPLTALQYLALNSCKNLTDRGLSHLKSLMALQHLVLSGCDNLTD 433
Query: 387 SGAAYLRNFKNLRSL------EICGGGLTD-AGLTGLVSLNVSN---------------- 423
+G A+L+ L++L + G GL A LT L +L++S
Sbjct: 434 AGLAHLKPLTALQTLGLRRCQNLTGDGLAHLAPLTALQTLDLSYCKKLKDAGLAHLKPLT 493
Query: 424 ----------SRITSAGLRHLKPLKNLRSLTLESC 448
S +T AGL HLKPL L+ L L C
Sbjct: 494 ALQTLGLKWCSNLTDAGLAHLKPLAALQHLDLSYC 528
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 148/268 (55%), Gaps = 25/268 (9%)
Query: 190 SKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEK 247
+ +TD+ + LK + L +L+LE C +T L L+ L +L +LNLN C +L+D G
Sbjct: 204 AHLTDAHLLTLKNCENLKVLHLEACQAITDDGLAHLAPLTALQHLNLNGCYKLTDAGLVH 263
Query: 248 FSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCL 305
+ +L+ L+L + + D LVHLK LT L++L L SC + D GL +L L L+ L
Sbjct: 264 LKSLTALQTLDLSYCKNLKDAGLVHLKPLTALQNLALTSCKNLTDRGLSHLKSLTALQTL 323
Query: 306 ELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQITD 362
+LS + +GL HL LT L++++LS+ ++D L L L++L++LNL +++ D
Sbjct: 324 DLSYCKNFKDAGLAHLPPLTALQTLDLSYCKDLTDRGLSHLKSLTALQTLNLSYCKKLKD 383
Query: 363 TGLAALTSLTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNV 421
GLA L LT L +L L + +TD G ++L++ L+ L + G
Sbjct: 384 AGLAHLKPLTALQYLALNSCKNLTDRGLSHLKSLMALQHLVLSGC--------------- 428
Query: 422 SNSRITSAGLRHLKPLKNLRSLTLESCK 449
+T AGL HLKPL L++L L C+
Sbjct: 429 --DNLTDAGLAHLKPLTALQTLGLRRCQ 454
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 125/222 (56%), Gaps = 19/222 (8%)
Query: 247 KFSKI-----GSLKVLNLGFN-EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGL 299
+F KI ++ LN N +TD L+ LK NL+ L+L++C I D+GL +L L
Sbjct: 183 EFEKIINHFSNEIEALNFSNNAHLTDAHLLTLKNCENLKVLHLEACQAITDDGLAHLAPL 242
Query: 300 CNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA 357
L+ L L+ ++ +GL HL LT L++++LS+ + D L L L++L++L L +
Sbjct: 243 TALQHLNLNGCYKLTDAGLVHLKSLTALQTLDLSYCKNLKDAGLVHLKPLTALQNLALTS 302
Query: 358 -RQITDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGL- 413
+ +TD GL+ L SLT L LDL + D+G A+L L++L++ LTD GL
Sbjct: 303 CKNLTDRGLSHLKSLTALQTLDLSYCKNFKDAGLAHLPPLTALQTLDLSYCKDLTDRGLS 362
Query: 414 -----TGLVSLNVSN-SRITSAGLRHLKPLKNLRSLTLESCK 449
T L +LN+S ++ AGL HLKPL L+ L L SCK
Sbjct: 363 HLKSLTALQTLNLSYCKKLKDAGLAHLKPLTALQYLALNSCK 404
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 57 SSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
++L ++DLS + D+GL HLK + LQ+L +C ++D GL HL+ L+ L L
Sbjct: 468 TALQTLDLSYCKKLKDAGLAHLKPLTALQTLGLKWCSNLTDAGLAHLKPLAALQHLDLSY 527
Query: 116 NNAITAQGMKAFAGLINLVKLDLER 140
N +T G+ F L + L++ R
Sbjct: 528 CNNLTRAGLANFKILGASLNLEIVR 552
>gi|46447300|ref|YP_008665.1| hypothetical protein pc1666 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400941|emb|CAF24390.1| hypothetical protein pc1666 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 518
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/331 (37%), Positives = 181/331 (54%), Gaps = 18/331 (5%)
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+K F+ I + E I L+ LK L+ L ++ C+ +TD+ + L+ L L+
Sbjct: 179 LKFFSNEIEALNFS-ENTYLIDAHLLTLKNCKNLKVLYLQECHNLTDAGLSHLAPLVTLQ 237
Query: 184 SLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QL 240
L +S CSK+TD+G+A+L L L L+L C +T A L L+ L +L +LNL+ C +L
Sbjct: 238 HLNLSYCSKLTDAGLAHLTSLVTLQHLDLSKCYNLTDAGLTHLTPLAALQHLNLSYCSKL 297
Query: 241 SDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTG 298
+D G + + +L+ L+L + +TD L HL L L+ LNL C + D GL +LT
Sbjct: 298 TDAGLAHLTSLVTLQHLDLTWCVNLTDVGLAHLTPLAALQHLNLSYCIKLTDVGLAHLTS 357
Query: 299 LCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLD 356
L L+ L+L+ + GL HL+ L L+ + LS ++D L L L +L+ LNL
Sbjct: 358 LVALQHLDLTWCVNLTEVGLAHLTPLVTLQHLELSKCHNLTDAGLAHLTSLVALQHLNLS 417
Query: 357 A-RQITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEI-CGGGLTDAGL 413
++ITD GLA LT L L HLDL G ++TD G A+L L+ L++ C LTDAGL
Sbjct: 418 ICKKITDVGLAHLTPLVALQHLDLSGCDKLTDVGLAHLTTLVALQHLDLTCCVNLTDAGL 477
Query: 414 T------GLVSLNVSN-SRITSAGLRHLKPL 437
L LN+S + +T AGL H K L
Sbjct: 478 VHLKPLMALQHLNLSYCTNLTDAGLAHFKNL 508
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 162/296 (54%), Gaps = 10/296 (3%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
++TD+GL HL LQ L+ ++C +++D GL HL L L L + +T G+
Sbjct: 221 NLTDAGLSHLAPLVTLQHLNLSYCSKLTDAGLAHLTSLVTLQHLDLSKCYNLTDAGLTHL 280
Query: 128 AGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
L L L+L C+++ GL +L L+ L+ L++ WC +TD + L+ L L+ L
Sbjct: 281 TPLAALQHLNLSYCSKLTDAGLAHLTSLVTLQHLDLTWCVNLTDVGLAHLTPLAALQHLN 340
Query: 187 IS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQ-LSDD 243
+S C K+TD G+A+L L L L+L C +T L L+ L +L +L L++C L+D
Sbjct: 341 LSYCIKLTDVGLAHLTSLVALQHLDLTWCVNLTEVGLAHLTPLVTLQHLELSKCHNLTDA 400
Query: 244 GCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCN 301
G + + +L+ LNL +ITD L HL L L+ L+L C + D GL +LT L
Sbjct: 401 GLAHLTSLVALQHLNLSICKKITDVGLAHLTPLVALQHLDLSGCDKLTDVGLAHLTTLVA 460
Query: 302 LKCLELS-DTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL 355
L+ L+L+ + +GL HL L L+ +NLS+ T ++D L L++ SLNL
Sbjct: 461 LQHLDLTCCVNLTDAGLVHLKPLMALQHLNLSYCTNLTDAGLAHFKNLTT--SLNL 514
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 167/311 (53%), Gaps = 9/311 (2%)
Query: 71 DSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGL 130
D+ L+ LK+C NL+ L C ++D GL HL L L L+ + +T G+ L
Sbjct: 199 DAHLLTLKNCKNLKVLYLQECHNLTDAGLSHLAPLVTLQHLNLSYCSKLTDAGLAHLTSL 258
Query: 131 INLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS- 188
+ L LDL +C + GL +L L L+ LN+ +C+ +TD+ + L+ L L+ L ++
Sbjct: 259 VTLQHLDLSKCYNLTDAGLTHLTPLAALQHLNLSYCSKLTDAGLAHLTSLVTLQHLDLTW 318
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCE 246
C +TD G+A+L L L LNL C +T L L++L +L +L+L C L++ G
Sbjct: 319 CVNLTDVGLAHLTPLAALQHLNLSYCIKLTDVGLAHLTSLVALQHLDLTWCVNLTEVGLA 378
Query: 247 KFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKC 304
+ + +L+ L L + +TD L HL L L+ LNL C I D GL +LT L L+
Sbjct: 379 HLTPLVTLQHLELSKCHNLTDAGLAHLTSLVALQHLNLSICKKITDVGLAHLTPLVALQH 438
Query: 305 LELSD-TQVGSSGLRHLSGLTNLESINLS-FTGISDGSLRKLAGLSSLKSLNLDA-RQIT 361
L+LS ++ GL HL+ L L+ ++L+ ++D L L L +L+ LNL +T
Sbjct: 439 LDLSGCDKLTDVGLAHLTTLVALQHLDLTCCVNLTDAGLVHLKPLMALQHLNLSYCTNLT 498
Query: 362 DTGLAALTSLT 372
D GLA +LT
Sbjct: 499 DAGLAHFKNLT 509
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/275 (35%), Positives = 149/275 (54%), Gaps = 9/275 (3%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
S +TD+GL HL LQ LD + C ++D GL HL L+ L L+ + +T G+
Sbjct: 245 SKLTDAGLAHLTSLVTLQHLDLSKCYNLTDAGLTHLTPLAALQHLNLSYCSKLTDAGLAH 304
Query: 127 FAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
L+ L LDL C + GL +L L L+ LN+ +C +TD + L+ L L+ L
Sbjct: 305 LTSLVTLQHLDLTWCVNLTDVGLAHLTPLAALQHLNLSYCIKLTDVGLAHLTSLVALQHL 364
Query: 186 QIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QLSD 242
++ C +T+ G+A+L L L L L C +T A L L++L +L +LNL+ C +++D
Sbjct: 365 DLTWCVNLTEVGLAHLTPLVTLQHLELSKCHNLTDAGLAHLTSLVALQHLNLSICKKITD 424
Query: 243 DGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLC 300
G + + +L+ L+L G +++TD L HL L L+ L+L C + D GLV+L L
Sbjct: 425 VGLAHLTPLVALQHLDLSGCDKLTDVGLAHLTTLVALQHLDLTCCVNLTDAGLVHLKPLM 484
Query: 301 NLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFT 334
L+ L LS T + +GL H LT S+NL +
Sbjct: 485 ALQHLNLSYCTNLTDAGLAHFKNLTT--SLNLKLS 517
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 117/224 (52%), Gaps = 24/224 (10%)
Query: 233 LNLNRCQ-LSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIG 289
L L C L+D G + + +L+ LNL + +++TD L HL L L+ L+L C +
Sbjct: 214 LYLQECHNLTDAGLSHLAPLVTLQHLNLSYCSKLTDAGLAHLTSLVTLQHLDLSKCYNLT 273
Query: 290 DEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGL 347
D GL +LT L L+ L LS +++ +GL HL+ L L+ ++L++ ++D L L L
Sbjct: 274 DAGLTHLTPLAALQHLNLSYCSKLTDAGLAHLTSLVTLQHLDLTWCVNLTDVGLAHLTPL 333
Query: 348 SSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG 405
++L+ LNL ++TD GLA LTSL L HLDL + +T+ G A+L L+ LE+
Sbjct: 334 AALQHLNLSYCIKLTDVGLAHLTSLVALQHLDLTWCVNLTEVGLAHLTPLVTLQHLELSK 393
Query: 406 GGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
+T AGL HL L L+ L L CK
Sbjct: 394 C-----------------HNLTDAGLAHLTSLVALQHLNLSICK 420
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 58 SLLSVDLSGSD-VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+L +DLSG D +TD GL HL LQ LD C+ ++D GL HL+ L L L+
Sbjct: 435 ALQHLDLSGCDKLTDVGLAHLTTLVALQHLDLTCCVNLTDAGLVHLKPLMALQHLNLSYC 494
Query: 117 NAITAQGMKAFAGLINLVKLDLER 140
+T G+ F L + L L R
Sbjct: 495 TNLTDAGLAHFKNLTTSLNLKLSR 518
>gi|46446665|ref|YP_008030.1| hypothetical protein pc1031 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400306|emb|CAF23755.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 553
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 132/366 (36%), Positives = 189/366 (51%), Gaps = 34/366 (9%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD+ L+ LKDC NL+ L C ++D GL HL L+ L L +T G+
Sbjct: 207 LTDAHLLALKDCENLKVLHCKKCWGVTDAGLAHLTPLTALQRLDLSYCENLTDDGLAHLT 266
Query: 129 GLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L L LDL C + GL +L L L+ L + C +TD+ + L+ LT L+ L +
Sbjct: 267 PLTALQHLDLSYCENLTDDGLAHLAPLKALQRLALTNCKNLTDAGLTHLTTLTALQHLDL 326
Query: 188 S-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQ-LSDDG 244
S K+TD+G+A+LK L L L+L C +T A + L L +L +L+L++ + L+D G
Sbjct: 327 SQYWKLTDAGLAHLKPLTALQHLDLSLCYYLTDAGIAHLKPLTALQHLDLSQYRNLTDAG 386
Query: 245 CEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNL 302
+ + L+ LNL +TD L HL LT L+ LNL SC + D GLV+L L L
Sbjct: 387 LAHLTPLMGLQYLNLSACKNLTDAGLAHLAPLTALQHLNLSSCYNLTDAGLVHLIPLTAL 446
Query: 303 KCLELSDTQ-VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
+ L LSD + + +GL HL+ LT L+ +NLS + R++T
Sbjct: 447 QHLYLSDWENLTDTGLAHLAPLTALQHLNLS-----------------------NCRKLT 483
Query: 362 DTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRS--LEICGGGLTDAGLTGLVS 418
D GLA L SL LTHLDL + TD G +L L+ L +C LTD GL +
Sbjct: 484 DDGLAHLKSLVTLTHLDLSWCKNFTDEGLTHLTPLTGLQYLVLSLC-YHLTDDGLARFKT 542
Query: 419 LNVSNS 424
L VS++
Sbjct: 543 LAVSHN 548
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/339 (34%), Positives = 179/339 (52%), Gaps = 11/339 (3%)
Query: 20 LTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHL 77
LT+ L A +DC L+ L + GV D + + + ++L +DLS ++TD GL HL
Sbjct: 207 LTDAHLLALKDCENLKVLHCKKCWGVTDAGLAHL-TPLTALQRLDLSYCENLTDDGLAHL 265
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLD 137
+ LQ LD ++C ++D GL HL L L L+ +T G+ L L LD
Sbjct: 266 TPLTALQHLDLSYCENLTDDGLAHLAPLKALQRLALTNCKNLTDAGLTHLTTLTALQHLD 325
Query: 138 LERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK-VTDS 195
L + ++ GL +LK L L+ L++ C +TD+ + L LT L+ L +S + +TD+
Sbjct: 326 LSQYWKLTDAGLAHLKPLTALQHLDLSLCYYLTDAGIAHLKPLTALQHLDLSQYRNLTDA 385
Query: 196 GIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGS 253
G+A+L L L LNL C +T A L L+ L +L +LNL+ C L+D G + +
Sbjct: 386 GLAHLTPLMGLQYLNLSACKNLTDAGLAHLAPLTALQHLNLSSCYNLTDAGLVHLIPLTA 445
Query: 254 LKVLNLG-FNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQ 311
L+ L L + +TD L HL LT L+ LNL +C + D+GL +L L L L+LS +
Sbjct: 446 LQHLYLSDWENLTDTGLAHLAPLTALQHLNLSNCRKLTDDGLAHLKSLVTLTHLDLSWCK 505
Query: 312 -VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLS 348
GL HL+ LT L+ + LS ++D L + L+
Sbjct: 506 NFTDEGLTHLTPLTGLQYLVLSLCYHLTDDGLARFKTLA 544
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/314 (36%), Positives = 166/314 (52%), Gaps = 28/314 (8%)
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQ 204
L+ LK L+ L+ K C +TD+ + L+ LT L+ L +S C +TD G+A+L L
Sbjct: 210 AHLLALKDCENLKVLHCKKCWGVTDAGLAHLTPLTALQRLDLSYCENLTDDGLAHLTPLT 269
Query: 205 KLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLG-F 261
L L+L C +T L L+ L +L L L C+ L+D G + + +L+ L+L +
Sbjct: 270 ALQHLDLSYCENLTDDGLAHLAPLKALQRLALTNCKNLTDAGLTHLTTLTALQHLDLSQY 329
Query: 262 NEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQ-VGSSGLRH 319
++TD L HLK LT L+ L+L C + D G+ +L L L+ L+LS + + +GL H
Sbjct: 330 WKLTDAGLAHLKPLTALQHLDLSLCYYLTDAGIAHLKPLTALQHLDLSQYRNLTDAGLAH 389
Query: 320 LSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHL 377
L+ L L+ +NLS ++D L LA L++L+ LNL + +TD GL L LT L HL
Sbjct: 390 LTPLMGLQYLNLSACKNLTDAGLAHLAPLTALQHLNLSSCYNLTDAGLVHLIPLTALQHL 449
Query: 378 DLFGAR-ITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSR-ITSAGLRHLK 435
L +TD+G A+L A LT L LN+SN R +T GL HLK
Sbjct: 450 YLSDWENLTDTGLAHL------------------APLTALQHLNLSNCRKLTDDGLAHLK 491
Query: 436 PLKNLRSLTLESCK 449
L L L L CK
Sbjct: 492 SLVTLTHLDLSWCK 505
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 164/323 (50%), Gaps = 39/323 (12%)
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLE 212
L K+E+LN +TD+ + L NLK L C VTD+G+A+L L L L+L
Sbjct: 193 LKKIETLNFSDNAYLTDAHLLALKDCENLKVLHCKKCWGVTDAGLAHLTPLTALQRLDLS 252
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNE-ITDECLVH 271
C L+DDG + + +L+ L+L + E +TD+ L H
Sbjct: 253 YCE-----------------------NLTDDGLAHLTPLTALQHLDLSYCENLTDDGLAH 289
Query: 272 LKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDT-QVGSSGLRHLSGLTNLESI 329
L L L+ L L +C + D GL +LT L L+ L+LS ++ +GL HL LT L+ +
Sbjct: 290 LAPLKALQRLALTNCKNLTDAGLTHLTTLTALQHLDLSQYWKLTDAGLAHLKPLTALQHL 349
Query: 330 NLSF-TGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGAR-ITD 386
+LS ++D + L L++L+ L+L R +TD GLA LT L GL +L+L + +TD
Sbjct: 350 DLSLCYYLTDAGIAHLKPLTALQHLDLSQYRNLTDAGLAHLTPLMGLQYLNLSACKNLTD 409
Query: 387 SGAAYLRNFKNLRSLEICG-GGLTDAGLTGLVSLNVSN-------SRITSAGLRHLKPLK 438
+G A+L L+ L + LTDAGL L+ L +T GL HL PL
Sbjct: 410 AGLAHLAPLTALQHLNLSSCYNLTDAGLVHLIPLTALQHLYLSDWENLTDTGLAHLAPLT 469
Query: 439 NLRSLTLESC-KVTANDIKRLQS 460
L+ L L +C K+T + + L+S
Sbjct: 470 ALQHLNLSNCRKLTDDGLAHLKS 492
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 117/245 (47%), Gaps = 30/245 (12%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD+GL HLK + LQ LD + C ++D G+ HL+ L+ L L + +T G+
Sbjct: 332 LTDAGLAHLKPLTALQHLDLSLCYYLTDAGIAHLKPLTALQHLDLSQYRNLTDAGLAHLT 391
Query: 129 GLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L+ L L+L C + GL +L L L+ LN+ C +TD+ + L LT L+ L +
Sbjct: 392 PLMGLQYLNLSACKNLTDAGLAHLAPLTALQHLNLSSCYNLTDAGLVHLIPLTALQHLYL 451
Query: 188 S-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCE 246
S +TD+G+A+L L L LNL C +L+DDG
Sbjct: 452 SDWENLTDTGLAHLAPLTALQHLNLSNCR-----------------------KLTDDGLA 488
Query: 247 KFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLC---N 301
+ +L L+L + TDE L HL LT L+ L L C + D+GL L N
Sbjct: 489 HLKSLVTLTHLDLSWCKNFTDEGLTHLTPLTGLQYLVLSLCYHLTDDGLARFKTLAVSHN 548
Query: 302 LKCLE 306
LK ++
Sbjct: 549 LKIIK 553
>gi|149174696|ref|ZP_01853321.1| hypothetical protein PM8797T_26210 [Planctomyces maris DSM 8797]
gi|148846390|gb|EDL60728.1| hypothetical protein PM8797T_26210 [Planctomyces maris DSM 8797]
Length = 460
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 182/373 (48%), Gaps = 34/373 (9%)
Query: 95 SDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGL 154
D L+HL GL +L L N T + L L LE G+ NL L
Sbjct: 106 QDADLKHLAGLPSLERLILWGPN-FTDVSTEEIGKKNKLWFLSLESTAIGDEGVKNLSDL 164
Query: 155 MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK-VTDSGIAYLKGLQKLTLLNLEG 213
L+ L+++ N IT+ +K ++ LK L + +K + D G+ ++KG++ L +L ++
Sbjct: 165 QGLQVLSLRATN-ITNDALKVVAAFPELKDLDLRFNKEINDEGMPHIKGMKNLKVLKVQA 223
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
VT + ++AL +L LN +SD+ E K +L L L EI+DE + +LK
Sbjct: 224 TQVTDEGMKDIAALPNLQRLNTWGRNISDETLE-LLKDKNLVSLELDDTEISDEGMKYLK 282
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
+TN+ESL+L +G+ G+ N+ + L+ L L DT V G+++LSGLT+
Sbjct: 283 DMTNMESLHLRRDFVGNPGIENIQNMKKLQTLHLRDTVVTDEGMKYLSGLTD-------- 334
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
L L+LD I D GL + L LT L L+G TD G +
Sbjct: 335 ----------------LTYLDLDESMIGDQGLEQIKDLKKLTRLGLWGTETTDQGLKVIS 378
Query: 394 NFKNLRSLEICGGGLTDAGLTGLVS------LNVSNSRITSAGLRHLKPLKNLRSLTLES 447
F L L + G +TDAGL L+ LN+S + I+ GL+ L LKNL+ L L
Sbjct: 379 GFTELNRLNLEGTPITDAGLKQLLPLKKLEYLNLSKTEISDEGLKTLAALKNLKELQLSF 438
Query: 448 CKVTANDIKRLQS 460
+VT + +K+ ++
Sbjct: 439 TQVTDDGVKQFEA 451
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 171/364 (46%), Gaps = 27/364 (7%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDF---NFC------------------- 91
S +L +DL G++ D+ L HL +L+ L NF
Sbjct: 90 SDDGRVLILDLKGTNAQDADLKHLAGLPSLERLILWGPNFTDVSTEEIGKKNKLWFLSLE 149
Query: 92 -IQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLV 149
I D G+++L L L LS R N IT +K A L LDL I+ G+
Sbjct: 150 STAIGDEGVKNLSDLQGLQVLSLRATN-ITNDALKVVAAFPELKDLDLRFNKEINDEGMP 208
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
++KG+ L+ L ++ +TD MK ++ L NL+ L ++D + LK + L L
Sbjct: 209 HIKGMKNLKVLKVQ-ATQVTDEGMKDIAALPNLQRLNTWGRNISDETLELLKD-KNLVSL 266
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
L+ ++ + L + ++ L+L R + + G E + L+ L+L +TDE +
Sbjct: 267 ELDDTEISDEGMKYLKDMTNMESLHLRRDFVGNPGIENIQNMKKLQTLHLRDTVVTDEGM 326
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
+L GLT+L L+LD IGD+GL + L L L L T+ GL+ +SG T L +
Sbjct: 327 KYLSGLTDLTYLDLDESMIGDQGLEQIKDLKKLTRLGLWGTETTDQGLKVISGFTELNRL 386
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGA 389
NL T I+D L++L L L+ LNL +I+D GL L +L L L L ++TD G
Sbjct: 387 NLEGTPITDAGLKQLLPLKKLEYLNLSKTEISDEGLKTLAALKNLKELQLSFTQVTDDGV 446
Query: 390 AYLR 393
Sbjct: 447 KQFE 450
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 151/294 (51%), Gaps = 9/294 (3%)
Query: 55 QGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
QG +LS L +++T+ L + L+ LD F +I+D G+ H++G+ NL L +
Sbjct: 165 QGLQVLS--LRATNITNDALKVVAAFPELKDLDLRFNKEINDEGMPHIKGMKNLKVLKVQ 222
Query: 115 RNNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
+T +GMK A L NL +L+ + L+ K L+ LE + + I+D
Sbjct: 223 ATQ-VTDEGMKDIAALPNLQRLNTWGRNISDETLELLKDKNLVSLELDDTE----ISDEG 277
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
MK L +TN++SL + V + GI ++ ++KL L+L VT + LS L L Y
Sbjct: 278 MKYLKDMTNMESLHLRRDFVGNPGIENIQNMKKLQTLHLRDTVVTDEGMKYLSGLTDLTY 337
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L+L+ + D G E+ + L L L E TD+ L + G T L LNL+ I D G
Sbjct: 338 LDLDESMIGDQGLEQIKDLKKLTRLGLWGTETTDQGLKVISGFTELNRLNLEGTPITDAG 397
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAG 346
L L L L+ L LS T++ GL+ L+ L NL+ + LSFT ++D +++
Sbjct: 398 LKQLLPLKKLEYLNLSKTEISDEGLKTLAALKNLKELQLSFTQVTDDGVKQFEA 451
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 122/242 (50%), Gaps = 8/242 (3%)
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
+S G + L+L D + + + SL+ L L TD + L L+L
Sbjct: 89 MSDDGRVLILDLKGTNAQDADLKHLAGLPSLERLILWGPNFTDVSTEEIGKKNKLWFLSL 148
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG-ISDGSLR 342
+S IGDEG+ NL+ L L+ L L T + + L+ ++ L+ ++L F I+D +
Sbjct: 149 ESTAIGDEGVKNLSDLQGLQVLSLRATNITNDALKVVAAFPELKDLDLRFNKEINDEGMP 208
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
+ G+ +LK L + A Q+TD G+ + +L L L+ +G I+D L++ KNL SLE
Sbjct: 209 HIKGMKNLKVLKVQATQVTDEGMKDIAALPNLQRLNTWGRNISDETLELLKD-KNLVSLE 267
Query: 403 ICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIK 456
+ ++D G +T + SL++ + + G+ +++ +K L++L L VT +K
Sbjct: 268 LDDTEISDEGMKYLKDMTNMESLHLRRDFVGNPGIENIQNMKKLQTLHLRDTVVTDEGMK 327
Query: 457 RL 458
L
Sbjct: 328 YL 329
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 34/198 (17%)
Query: 304 CLELSDTQVGSSGLRHLSGLTNLES------------------------INLSFTGISDG 339
L+L T + L+HL+GL +LE ++L T I D
Sbjct: 97 ILDLKGTNAQDADLKHLAGLPSLERLILWGPNFTDVSTEEIGKKNKLWFLSLESTAIGDE 156
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNL 398
++ L+ L L+ L+L A IT+ L + + L LDL F I D G +++ KNL
Sbjct: 157 GVKNLSDLQGLQVLSLRATNITNDALKVVAAFPELKDLDLRFNKEINDEGMPHIKGMKNL 216
Query: 399 RSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
+ L++ +TD G L L LN I+ L LK KNL SL L+ +++
Sbjct: 217 KVLKVQATQVTDEGMKDIAALPNLQRLNTWGRNISDETLELLKD-KNLVSLELDDTEISD 275
Query: 453 NDIKRLQSRDLPNLVSFR 470
+K L +D+ N+ S
Sbjct: 276 EGMKYL--KDMTNMESLH 291
>gi|108763744|ref|YP_632240.1| leucine-rich repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108467624|gb|ABF92809.1| leucine-rich repeat domain protein [Myxococcus xanthus DK 1622]
Length = 624
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 148/483 (30%), Positives = 218/483 (45%), Gaps = 68/483 (14%)
Query: 16 YSRCLTEVSLEA--------FRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGS 67
Y+ L V EA R+ + +L G GV + V Q S ++++ +SG+
Sbjct: 90 YAEPLRPVRTEAEAREIAAVLREHHVPELSFGAV-GVPAPELLVALLQESGVVALQVSGT 148
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
D ++ L L++ + L++L N ++++ GL L+ + L L +
Sbjct: 149 DFGNAHLASLENATQLEALHLN-ATRVTNVGLAPLKRMRRLAVLRLDETPV-------SD 200
Query: 128 AGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
AGL +L + R + G V+ +GL L +P L+ L +
Sbjct: 201 AGLASLSEHTTLRRVTLAGTAVSPQGLGFLAR--------------QP-----GLEELDL 241
Query: 188 SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEK 247
S + V D+ +A L G L LNL G VT A L LSA+ SL L L R SD
Sbjct: 242 SDTAVDDTVLAVLPG-APLHTLNLSGTKVTNAGLRGLSAMPSLRRLGLARTAASDASLLH 300
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL 307
+ + L+ L+LG ++TD L+HL L L +L L I GL +L GL L+ L L
Sbjct: 301 ITGLRELEALHLGSTQVTDAGLLHLAKLPALRALVLSKARIRGAGLRHLAGLSRLEALHL 360
Query: 308 SDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAA 367
DT VG S LRHL GL L ++LS T I+ L++L+ L +L+SL L +TD L A
Sbjct: 361 DDTLVGDSALRHLRGLNELRELDLSRTAITGTGLQELSTLVALESLWLSGLALTDDSLTA 420
Query: 368 LTSLTGLT------------------------HLDLFGARITDSGAAYLRN-FKNLRSLE 402
L L+ LT HLDL TD +R F L SL+
Sbjct: 421 LAPLSQLTRLALSHTPIGPEALNHLGSRPLLRHLDLSKTGFTDEWVPSIRQAFPGLHSLK 480
Query: 403 ICGGGLTDAGL------TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIK 456
LTDAGL T L +++V+ + I +GL L L L +L L + ++ + K
Sbjct: 481 AERTLLTDAGLGQFAEWTELEAIHVAGTLINGSGLTRLHTLARLTTLDLGATRLDSEGQK 540
Query: 457 RLQ 459
LQ
Sbjct: 541 ALQ 543
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 197/403 (48%), Gaps = 9/403 (2%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ ++L V L+G+ V+ GL L L+ LD + + D L L G + L +L+
Sbjct: 207 SEHTTLRRVTLAGTAVSPQGLGFLARQPGLEELDLSDT-AVDDTVLAVLPG-APLHTLNL 264
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
+T G++ + + +L +L L R L+++ GL +LE+L++ +TD+ +
Sbjct: 265 S-GTKVTNAGLRGLSAMPSLRRLGLARTAASDASLLHITGLRELEALHLG-STQVTDAGL 322
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
L+ L L++L +S +++ +G+ +L GL +L L+L+ V + L L L L L
Sbjct: 323 LHLAKLPALRALVLSKARIRGAGLRHLAGLSRLEALHLDDTLVGDSALRHLRGLNELREL 382
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+L+R ++ G ++ S + +L+ L L +TD+ L L L+ L L L IG E L
Sbjct: 383 DLSRTAITGTGLQELSTLVALESLWLSGLALTDDSLTALAPLSQLTRLALSHTPIGPEAL 442
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHL-SGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
+L L+ L+LS T + + L S+ T ++D L + A + L++
Sbjct: 443 NHLGSRPLLRHLDLSKTGFTDEWVPSIRQAFPGLHSLKAERTLLTDAGLGQFAEWTELEA 502
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
+++ I +GL L +L LT LDL R+ G L+ F L L + G D
Sbjct: 503 IHVAGTLINGSGLTRLHTLARLTTLDLGATRLDSEGQKALQGFTKLVWLSVAGVRTGDEM 562
Query: 413 L----TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
L L +L ++ +++T AGL L L +LR L L V+
Sbjct: 563 LGHLPRSLRTLYLTRTKVTDAGLPALHKLPHLRELDLRGTAVS 605
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 185/406 (45%), Gaps = 29/406 (7%)
Query: 6 ISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGS-------- 57
+S Q L L E+ L D A+ D L PG +++ ++ +
Sbjct: 222 VSPQGLGFLARQPGLEELDLS---DTAVDDTVLAVLPGAPLHTLNLSGTKVTNAGLRGLS 278
Query: 58 ---SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
SL + L+ + +D+ L+H+ L++L Q++D GL HL L L +L
Sbjct: 279 AMPSLRRLGLARTAASDASLLHITGLRELEALHLG-STQVTDAGLLHLAKLPALRALVLS 337
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
+ I G++ AGL L L L+ L +L+GL +L L++ IT + ++
Sbjct: 338 KAR-IRGAGLRHLAGLSRLEALHLDDTLVGDSALRHLRGLNELRELDLS-RTAITGTGLQ 395
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
LS L L+SL +S +TD + L L +LT L L P+ L+ L + L +L+
Sbjct: 396 ELSTLVALESLWLSGLALTDDSLTALAPLSQLTRLALSHTPIGPEALNHLGSRPLLRHLD 455
Query: 235 LNRCQLSDDGC----EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L++ +D+ + F + SLK +TD L T LE++++ I
Sbjct: 456 LSKTGFTDEWVPSIRQAFPGLHSLKAER---TLLTDAGLGQFAEWTELEAIHVAGTLING 512
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS-S 349
GL L L L L+L T++ S G + L G T L + LS G+ G L L S
Sbjct: 513 SGLTRLHTLARLTTLDLGATRLDSEGQKALQGFTKL--VWLSVAGVRTGD-EMLGHLPRS 569
Query: 350 LKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI-TDSGAAYLRN 394
L++L L ++TD GL AL L L LDL G + T++ +A R
Sbjct: 570 LRTLYLTRTKVTDAGLPALHKLPHLRELDLRGTAVSTEARSALARE 615
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 124/258 (48%), Gaps = 7/258 (2%)
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
L + G A L SL L L+LN ++++ G ++ L VL L ++D
Sbjct: 143 LQVSGTDFGNAHLASLENATQLEALHLNATRVTNVGLAPLKRMRRLAVLRLDETPVSDAG 202
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
L L T L + L + +GL L L+ L+LSDT V + L L G L +
Sbjct: 203 LASLSEHTTLRRVTLAGTAVSPQGLGFLARQPGLEELDLSDTAVDDTVLAVLPG-APLHT 261
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG 388
+NLS T +++ LR L+ + SL+ L L +D L +T L L L L ++TD+G
Sbjct: 262 LNLSGTKVTNAGLRGLSAMPSLRRLGLARTAASDASLLHITGLRELEALHLGSTQVTDAG 321
Query: 389 AAYLRNFKNLRSL-----EICGGGLTD-AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRS 442
+L LR+L I G GL AGL+ L +L++ ++ + + LRHL+ L LR
Sbjct: 322 LLHLAKLPALRALVLSKARIRGAGLRHLAGLSRLEALHLDDTLVGDSALRHLRGLNELRE 381
Query: 443 LTLESCKVTANDIKRLQS 460
L L +T ++ L +
Sbjct: 382 LDLSRTAITGTGLQELST 399
>gi|290997932|ref|XP_002681535.1| predicted protein [Naegleria gruberi]
gi|284095159|gb|EFC48791.1| predicted protein [Naegleria gruberi]
Length = 448
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 214/435 (49%), Gaps = 49/435 (11%)
Query: 35 DLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQI 94
D+C + K++ S+ L S+D+ G+++ D G ++ + L SL+ + +I
Sbjct: 32 DICYSRIGAEGAKFI----SEMKQLTSLDIGGNEIGDEGSKYISEMKQLTSLNIDNN-RI 86
Query: 95 SDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--------------- 139
D G + + + LTSLS NN I +G K+ + + L LD+
Sbjct: 87 GDEGAKSISEMKQLTSLSIN-NNEIGVEGAKSISEMKQLTSLDISGNGIGDKGVKFISEM 145
Query: 140 ---RCTRIHGGLVNLKG------LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCS 190
+ I G + +G + +L SLNI N I D +K +S + L SL I +
Sbjct: 146 KQLKLLDIGGNEIGDEGSKYISEMKQLTSLNI-GENRIGDEGVKSISEMKQLTSLSIYNN 204
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
++ D G + +++LT L++ G + + S+S + L L+++ + D+G + S+
Sbjct: 205 RIGDEGAKSISEMKQLTSLDISGNGIGDKGVKSISEMKQLTSLDISGNGIGDEGAKFISE 264
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
+ LK+L++G NEI DE ++ + L SLN+ + IG EG+ +++ + L L + +
Sbjct: 265 MKQLKLLDIGGNEIGDEGSKYISEMKQLTSLNIYNNEIGVEGVKSISEMKQLTSLYIYNN 324
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
Q+G G++ +S + L+S+N+ + I D ++ ++ + L SLN+ I D G+ +++
Sbjct: 325 QIGVEGVKSISEMKQLKSLNICYNEIGDKGVKFISEMKQLISLNIGGNGIGDEGVKSISE 384
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAG 430
+ LT L++ RI G+ ++ K L SL+IC + I G
Sbjct: 385 MKQLTSLNISKNRIGAEGSKFISEMKQLTSLDIC------------------YNEIGGEG 426
Query: 431 LRHLKPLKNLRSLTL 445
++ + +K L+SL++
Sbjct: 427 VKSISEMKQLKSLSI 441
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 202/414 (48%), Gaps = 15/414 (3%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
+D+ + + D G + + L SLD + +I G + + + LTSL N I
Sbjct: 7 LDIGENQIGDEGAKSISEMKQLTSLDICYS-RIGAEGAKFISEMKQLTSLDIG-GNEIGD 64
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
+G K + + L L+++ G ++ + +L SL+I N I K +S +
Sbjct: 65 EGSKYISEMKQLTSLNIDNNRIGDEGAKSISEMKQLTSLSIN-NNEIGVEGAKSISEMKQ 123
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
L SL IS + + D G+ ++ +++L LL++ G + +S + L LN+ ++
Sbjct: 124 LTSLDISGNGIGDKGVKFISEMKQLKLLDIGGNEIGDEGSKYISEMKQLTSLNIGENRIG 183
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
D+G + S++ L L++ N I DE + + L SL++ GIGD+G+ +++ +
Sbjct: 184 DEGVKSISEMKQLTSLSIYNNRIGDEGAKSISEMKQLTSLDISGNGIGDKGVKSISEMKQ 243
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
L L++S +G G + +S + L+ +++ I D + ++ + L SLN+ +I
Sbjct: 244 LTSLDISGNGIGDEGAKFISEMKQLKLLDIGGNEIGDEGSKYISEMKQLTSLNIYNNEIG 303
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTG 415
G+ +++ + LT L ++ +I G + K L+SL IC + D G +
Sbjct: 304 VEGVKSISEMKQLTSLYIYNNQIGVEGVKSISEMKQLKSLNICYNEIGDKGVKFISEMKQ 363
Query: 416 LVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA------NDIKRLQSRDL 463
L+SLN+ + I G++ + +K L SL + ++ A +++K+L S D+
Sbjct: 364 LISLNIGGNGIGDEGVKSISEMKQLTSLNISKNRIGAEGSKFISEMKQLTSLDI 417
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 169/318 (53%), Gaps = 4/318 (1%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
G+ DK + I S+ L +D+ G+++ D G ++ + L SL+ +I D G++ +
Sbjct: 133 GIGDKGVKFI-SEMKQLKLLDIGGNEIGDEGSKYISEMKQLTSLNIGEN-RIGDEGVKSI 190
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
+ LTSLS NN I +G K+ + + L LD+ G+ ++ + +L SL+I
Sbjct: 191 SEMKQLTSLSIY-NNRIGDEGAKSISEMKQLTSLDISGNGIGDKGVKSISEMKQLTSLDI 249
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
N I D K +S + LK L I +++ D G Y+ +++LT LN+ + +
Sbjct: 250 SG-NGIGDEGAKFISEMKQLKLLDIGGNEIGDEGSKYISEMKQLTSLNIYNNEIGVEGVK 308
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
S+S + L L + Q+ +G + S++ LK LN+ +NEI D+ + + + L SLN
Sbjct: 309 SISEMKQLTSLYIYNNQIGVEGVKSISEMKQLKSLNICYNEIGDKGVKFISEMKQLISLN 368
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
+ GIGDEG+ +++ + L L +S ++G+ G + +S + L S+++ + I ++
Sbjct: 369 IGGNGIGDEGVKSISEMKQLTSLNISKNRIGAEGSKFISEMKQLTSLDICYNEIGGEGVK 428
Query: 343 KLAGLSSLKSLNLDARQI 360
++ + LKSL++ +Q+
Sbjct: 429 SISEMKQLKSLSIHNQQM 446
>gi|168701995|ref|ZP_02734272.1| hypothetical protein GobsU_20883 [Gemmata obscuriglobus UQM 2246]
Length = 684
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 200/452 (44%), Gaps = 62/452 (13%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
+L + L G+ VTD+GL HLK SNL L+ + ++D GL L LTSL + +
Sbjct: 64 ALTRIILHGTKVTDAGLAHLKGLSNLAHLNLAYS-GVTDAGLADLNAFPLLTSL-WVQGT 121
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS 177
++ G+ L L +DL GL +LK + +TD+++ L
Sbjct: 122 TVSDAGLAVARELPALTHIDLSGTKVTGPGLAHLK--GLKGLTLLLSGTALTDANLCYLK 179
Query: 178 GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS----------AL 227
GLT + L +S + +TD+G+++L L+ L L++ T A L L +
Sbjct: 180 GLTGVVELSLSDTPLTDAGLSHLHDLKALGTLDVRKTRATPASLAELHKSVPGCRIRDSA 239
Query: 228 GSLFYLNLNRC------------------------------------------QLSDDGC 245
G L++NR + DD
Sbjct: 240 GDRPPLDVNRLAAEWVLSVGGSVGVSGQPRDIRAAADLPQGPLALARVNLSDRSVKDDDL 299
Query: 246 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
+ + L L L +TD L +LK L L+ L+L + D GL + +L L
Sbjct: 300 GRLAGCTGLTELVLHETRVTDAALGYLKNLARLQFLSLTGTDVTDAGLARIRERKSLTTL 359
Query: 306 ELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL 365
LS T+V ++GL HL+GL L I+L TG+SD L L GL+ LK+L L ++ GL
Sbjct: 360 HLSSTKVTNAGLVHLAGLAGLSHIHLDGTGVSDAGLVHLKGLTDLKTLGLSRTRVLGPGL 419
Query: 366 AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSL 419
A S L L L +TD A+L LR L G GLTDAG LTGL+SL
Sbjct: 420 AHTHSWKRLDALYLTNTGVTDEAFAHLSPHHTLRHLGADGTGLTDAGMAHVRHLTGLISL 479
Query: 420 NVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
N+S++ + AGL L LT+ + KVT
Sbjct: 480 NLSDTAVGDAGLMQLGSNAGPTHLTVRNTKVT 511
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 200/490 (40%), Gaps = 103/490 (21%)
Query: 30 DCALQDLCLGQYPGVNDKWMD---------VIASQGSSLLSVDLSGSDVTDSGLIHLKDC 80
D L DL +P + W+ +A + +L +DLSG+ VT GL HLK
Sbjct: 101 DAGLADL--NAFPLLTSLWVQGTTVSDAGLAVARELPALTHIDLSGTKVTGPGLAHLKGL 158
Query: 81 -------SNLQSLDFNFCI---------------QISDGGLEHLRGLSNLTSLSFRRNNA 118
S D N C ++D GL HL L L +L R+ A
Sbjct: 159 KGLTLLLSGTALTDANLCYLKGLTGVVELSLSDTPLTDAGLSHLHDLKALGTLDVRKTRA 218
Query: 119 ITA---------QGMKAFAGLINLVKLDLERCTR------------------IHGGLVNL 151
A G + + LD+ R I
Sbjct: 219 TPASLAELHKSVPGCRIRDSAGDRPPLDVNRLAAEWVLSVGGSVGVSGQPRDIRAAADLP 278
Query: 152 KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
+G + L +N+ + D D+ L+G T L L + ++VTD+ + YLK L +L L+L
Sbjct: 279 QGPLALARVNLS-DRSVKDDDLGRLAGCTGLTELVLHETRVTDAALGYLKNLARLQFLSL 337
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH 271
G VT D G + + SL L+L ++T+ LVH
Sbjct: 338 TGTDVT------------------------DAGLARIRERKSLTTLHLSSTKVTNAGLVH 373
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
L GL L ++LD G+ D GLV+L GL +LK L LS T+V GL H L+++ L
Sbjct: 374 LAGLAGLSHIHLDGTGVSDAGLVHLKGLTDLKTLGLSRTRVLGPGLAHTHSWKRLDALYL 433
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
+ TG++D + L+ +L+ L D +TD G+A + LTGL L+L + D+G
Sbjct: 434 TNTGVTDEAFAHLSPHHTLRHLGADGTGLTDAGMAHVRHLTGLISLNLSDTAVGDAGLMQ 493
Query: 392 LRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
L ++AG T L V N+++T GL R++T + ++
Sbjct: 494 LG---------------SNAGPT---HLTVRNTKVTLRGLHAFHATGPWRTVTWDGGQLG 535
Query: 452 ANDIKRLQSR 461
+ R +R
Sbjct: 536 PTEADRSAAR 545
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 155/349 (44%), Gaps = 53/349 (15%)
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
AG L +L L L LK L +L+ L++ + +TD+ + + +L +L
Sbjct: 302 LAGCTGLTELVLHETRVTDAALGYLKNLARLQFLSLTGTD-VTDAGLARIRERKSLTTLH 360
Query: 187 ISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCE 246
+S +KVT++G+ +L GL L+ ++L+G V+ A L L L L L L+R ++ G
Sbjct: 361 LSSTKVTNAGLVHLAGLAGLSHIHLDGTGVSDAGLVHLKGLTDLKTLGLSRTRVLGPGLA 420
Query: 247 KFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE 306
L L L +TDE HL L L D G+ D G+ ++ L L L
Sbjct: 421 HTHSWKRLDALYLTNTGVTDEAFAHLSPHHTLRHLGADGTGLTDAGMAHVRHLTGLISLN 480
Query: 307 LSDTQVGSSGLRHL---SGLTNLESINLSFT----------------------------- 334
LSDT VG +GL L +G T+L N T
Sbjct: 481 LSDTAVGDAGLMQLGSNAGPTHLTVRNTKVTLRGLHAFHATGPWRTVTWDGGQLGPTEAD 540
Query: 335 ------GISDGSLRKLAGLSS--------------LKSLNLDARQITDTGLAALTSLTGL 374
++ G +++G+ + + L L+ ++DT LAAL LTG+
Sbjct: 541 RSAARWALAAGGRLRVSGVPNEIVAAGELPKRKFVVTELALNGLAVSDTELAALKYLTGM 600
Query: 375 THLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN 423
+ LDL G+ IT+ G A+L+ LR L + +TDAGL + +L ++
Sbjct: 601 SRLDLAGSAITNDGLAHLKGLTGLRRLGLSETRVTDAGLDAIKALPLTE 649
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 149/344 (43%), Gaps = 59/344 (17%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
+ D+D+ L L + + +KVTD+G+A+LKGL L LNL VT A L L+
Sbjct: 49 RAVADADLARLKDCQALTRIILHGTKVTDAGLAHLKGLSNLAHLNLAYSGVTDAGLADLN 108
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
A L L + +SD G ++ +L ++L ++T L HLK +L L
Sbjct: 109 AFPLLTSLWVQGTTVSDAGLAVARELPALTHIDLSGTKVTGPGLAHLK-GLKGLTLLLSG 167
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL- 344
+ D L L GL + L LSDT + +GL HL L L ++++ T + SL +L
Sbjct: 168 TALTDANLCYLKGLTGVVELSLSDTPLTDAGLSHLHDLKALGTLDVRKTRATPASLAELH 227
Query: 345 ---------------------------------------------------AGLSSLKSL 353
G +L +
Sbjct: 228 KSVPGCRIRDSAGDRPPLDVNRLAAEWVLSVGGSVGVSGQPRDIRAAADLPQGPLALARV 287
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL 413
NL R + D L L TGLT L L R+TD+ YL+N L+ L + G +TDAGL
Sbjct: 288 NLSDRSVKDDDLGRLAGCTGLTELVLHETRVTDAALGYLKNLARLQFLSLTGTDVTDAGL 347
Query: 414 T------GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
L +L++S++++T+AGL HL L L + L+ V+
Sbjct: 348 ARIRERKSLTTLHLSSTKVTNAGLVHLAGLAGLSHIHLDGTGVS 391
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 98/188 (52%), Gaps = 7/188 (3%)
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
L + +L + D L L L + L T+V +GL HL GL+NL +NL+++G++
Sbjct: 41 LTAADLTDRAVADADLARLKDCQALTRIILHGTKVTDAGLAHLKGLSNLAHLNLAYSGVT 100
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
D L L L SL + ++D GLA L LTH+DL G ++T G A+L
Sbjct: 101 DAGLADLNAFPLLTSLWVQGTTVSDAGLAVARELPALTHIDLSGTKVTGPGLAHL-KGLK 159
Query: 398 LRSLEICGGGLTDA------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
+L + G LTDA GLTG+V L++S++ +T AGL HL LK L +L + + T
Sbjct: 160 GLTLLLSGTALTDANLCYLKGLTGVVELSLSDTPLTDAGLSHLHDLKALGTLDVRKTRAT 219
Query: 452 ANDIKRLQ 459
+ L
Sbjct: 220 PASLAELH 227
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 92/213 (43%), Gaps = 25/213 (11%)
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
L + ++ V D+ +A LK Q LT + L G VT A L L L +L +LNL
Sbjct: 41 LTAADLTDRAVADADLARLKDCQALTRIILHGTKVTDAGLAHLKGLSNLAHLNL------ 94
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
++ +TD L L L SL + + D GL L
Sbjct: 95 ------------------AYSGVTDAGLADLNAFPLLTSLWVQGTTVSDAGLAVARELPA 136
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
L ++LS T+V GL HL ++ LS T ++D +L L GL+ + L+L +T
Sbjct: 137 LTHIDLSGTKVTGPGLAHLK-GLKGLTLLLSGTALTDANLCYLKGLTGVVELSLSDTPLT 195
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
D GL+ L L L LD+ R T + A L
Sbjct: 196 DAGLSHLHDLKALGTLDVRKTRATPASLAELHK 228
>gi|290998894|ref|XP_002682015.1| predicted protein [Naegleria gruberi]
gi|284095641|gb|EFC49271.1| predicted protein [Naegleria gruberi]
Length = 413
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 154/292 (52%), Gaps = 8/292 (2%)
Query: 160 LNIKWCNCITDS--DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
+N+K + DS +K +S + L SL I +++ G+ Y+ +++LT LN+ ++
Sbjct: 111 VNLKVSRWLLDSVDQLKFISEMKQLTSLDIYSNRIGVEGVKYISEMKQLTSLNISEIEIS 170
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 277
+S + L L ++ ++ D+G + S++ L LN+G NEI+DE H+ +
Sbjct: 171 DEGAKYISEMKQLTSLYIHNNEIGDEGSKHISEMKQLTSLNIGCNEISDEGAKHISEMNQ 230
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
L SL++ IGDEG ++ + L L+++D ++G G +++S + L S+N+ F I
Sbjct: 231 LISLSIGYNRIGDEGFKYISEMKQLTSLDITDDEIGDEGAKYISEMKQLTSLNIGFNEIG 290
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
D + ++ L L SL++ +I+D G ++ + L L + I+D GA Y+ K
Sbjct: 291 DEGAKYISELKQLTSLDISETEISDEGAKYISEMKQLIWLTIGYNEISDKGAKYISELKQ 350
Query: 398 LRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSL 443
L SL+I + + G + L+SLN+ +RI G +++ +K L SL
Sbjct: 351 LTSLDITDNKIGNEGAKYISEMNQLISLNIGYNRIGDEGAKYISEMKQLTSL 402
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 150/284 (52%), Gaps = 8/284 (2%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L S+D+ + + G+ ++ + L SL+ + I+ISD G +++ + LTSL +
Sbjct: 130 SEMKQLTSLDIYSNRIGVEGVKYISEMKQLTSLNIS-EIEISDEGAKYISEMKQLTSL-Y 187
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSD 172
NN I +G K + + L L++ C I G ++ + +L SL+I + N I D
Sbjct: 188 IHNNEIGDEGSKHISEMKQLTSLNI-GCNEISDEGAKHISEMNQLISLSIGY-NRIGDEG 245
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
K +S + L SL I+ ++ D G Y+ +++LT LN+ + +S L L
Sbjct: 246 FKYISEMKQLTSLDITDDEIGDEGAKYISEMKQLTSLNIGFNEIGDEGAKYISELKQLTS 305
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L+++ ++SD+G + S++ L L +G+NEI+D+ ++ L L SL++ IG+EG
Sbjct: 306 LDISETEISDEGAKYISEMKQLIWLTIGYNEISDKGAKYISELKQLTSLDITDNKIGNEG 365
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLS---GLTNLESINLSF 333
++ + L L + ++G G +++S LT+L I+L F
Sbjct: 366 AKYISEMNQLISLNIGYNRIGDEGAKYISEMKQLTSLRQISLGF 409
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRS 400
L+ ++ + L SL++ + +I G+ ++ + LT L++ I+D GA Y+ K L S
Sbjct: 126 LKFISEMKQLTSLDIYSNRIGVEGVKYISEMKQLTSLNISEIEISDEGAKYISEMKQLTS 185
Query: 401 LEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
L I + D G + L SLN+ + I+ G +H+ + L SL++
Sbjct: 186 LYIHNNEIGDEGSKHISEMKQLTSLNIGCNEISDEGAKHISEMNQLISLSI 236
>gi|46445833|ref|YP_007198.1| F-box protein [Candidatus Protochlamydia amoebophila UWE25]
gi|46399474|emb|CAF22923.1| putative F-box protein [Candidatus Protochlamydia amoebophila
UWE25]
Length = 337
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/331 (35%), Positives = 185/331 (55%), Gaps = 9/331 (2%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
+L ++L +TD+GL HLK LQ L+ ++C ++D GL HL L+ L L+
Sbjct: 6 ALQHLELGCCKLTDAGLAHLKSLVALQHLNLSWCDNLTDTGLAHLTPLTALQHLNLSVCG 65
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+T G+ L+ L LDL +C ++ GL +L L+ L+ L ++ C +TD + L
Sbjct: 66 KLTGAGLAHLTPLVALENLDLSQCGKLTDAGLAHLTPLVALQHLGMRGCRKLTDVGLAHL 125
Query: 177 SGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLN 234
L L+ L + CS +TD+G+A+L+ L L LNL+ C +T L L L +L +L+
Sbjct: 126 RPLVALQHLDLDGCSNLTDAGLAHLRPLVALQHLNLKRCDNLTDIGLAHLRPLVALQHLD 185
Query: 235 LNRC-QLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCG-IGDE 291
L+ C L+D G + + +L+ LNL G + TD L HL L L+ LNL C + D
Sbjct: 186 LDGCNNLTDAGLAHLTPLVALQHLNLRGCFKFTDAGLAHLTPLVALQYLNLSDCSNLTDA 245
Query: 292 GLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFTG-ISDGSLRKLAGLSS 349
GL +L L L+ L LS +++ +GL HL+ L LE ++LS G ++D L LA L++
Sbjct: 246 GLAHLKSLVALQHLNLSWCSKLTGAGLAHLTPLVALEDLDLSQCGKLTDAGLAHLALLTA 305
Query: 350 LKSLNLD-ARQITDTGLAALTSLTGLTHLDL 379
L+ LNL+ R++TD GLA +L +L+L
Sbjct: 306 LQYLNLERCRKLTDAGLAHFKTLAASIYLNL 336
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 178/325 (54%), Gaps = 17/325 (5%)
Query: 130 LINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS- 188
L+ L L+L C GL +LK L+ L+ LN+ WC+ +TD+ + L+ LT L+ L +S
Sbjct: 4 LVALQHLELGCCKLTDAGLAHLKSLVALQHLNLSWCDNLTDTGLAHLTPLTALQHLNLSV 63
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCE 246
C K+T +G+A+L L L L+L C +T A L L+ L +L +L + C +L+D G
Sbjct: 64 CGKLTGAGLAHLTPLVALENLDLSQCGKLTDAGLAHLTPLVALQHLGMRGCRKLTDVGLA 123
Query: 247 KFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKC 304
+ +L+ L+L G + +TD L HL+ L L+ LNL C + D GL +L L L+
Sbjct: 124 HLRPLVALQHLDLDGCSNLTDAGLAHLRPLVALQHLNLKRCDNLTDIGLAHLRPLVALQH 183
Query: 305 LELSD-TQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNL-DARQIT 361
L+L + +GL HL+ L L+ +NL +D L L L +L+ LNL D +T
Sbjct: 184 LDLDGCNNLTDAGLAHLTPLVALQHLNLRGCFKFTDAGLAHLTPLVALQYLNLSDCSNLT 243
Query: 362 DTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGLVS- 418
D GLA L SL L HL+L + +++T +G A+L L L++ G LTDAGL L
Sbjct: 244 DAGLAHLKSLVALQHLNLSWCSKLTGAGLAHLTPLVALEDLDLSQCGKLTDAGLAHLALL 303
Query: 419 -----LNVSNSR-ITSAGLRHLKPL 437
LN+ R +T AGL H K L
Sbjct: 304 TALQYLNLERCRKLTDAGLAHFKTL 328
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 158/292 (54%), Gaps = 19/292 (6%)
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLF 231
M+PL L + L++ C K+TD+G+A+LK L L LNL C +T L L+ L +L
Sbjct: 1 MRPLVAL---QHLELGCCKLTDAGLAHLKSLVALQHLNLSWCDNLTDTGLAHLTPLTALQ 57
Query: 232 YLNLNRC-QLSDDGCEKFSKIGSLKVLNLG-FNEITDECLVHLKGLTNLESLNLDSC-GI 288
+LNL+ C +L+ G + + +L+ L+L ++TD L HL L L+ L + C +
Sbjct: 58 HLNLSVCGKLTGAGLAHLTPLVALENLDLSQCGKLTDAGLAHLTPLVALQHLGMRGCRKL 117
Query: 289 GDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFT-GISDGSLRKLAG 346
D GL +L L L+ L+L + + +GL HL L L+ +NL ++D L L
Sbjct: 118 TDVGLAHLRPLVALQHLDLDGCSNLTDAGLAHLRPLVALQHLNLKRCDNLTDIGLAHLRP 177
Query: 347 LSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEIC 404
L +L+ L+LD +TD GLA LT L L HL+L G + TD+G A+L L+ L +
Sbjct: 178 LVALQHLDLDGCNNLTDAGLAHLTPLVALQHLNLRGCFKFTDAGLAHLTPLVALQYLNLS 237
Query: 405 G-GGLTDAGLTGLVSL------NVSN-SRITSAGLRHLKPLKNLRSLTLESC 448
LTDAGL L SL N+S S++T AGL HL PL L L L C
Sbjct: 238 DCSNLTDAGLAHLKSLVALQHLNLSWCSKLTGAGLAHLTPLVALEDLDLSQC 289
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 104/227 (45%), Gaps = 36/227 (15%)
Query: 18 RCLTEVSLEAFRD-CALQDLCLGQYPGVNDKWM----DVIASQGSSLLSVDLSGSDVTDS 72
R LT+V L R ALQ L L + D + ++A Q +L D ++TD
Sbjct: 115 RKLTDVGLAHLRPLVALQHLDLDGCSNLTDAGLAHLRPLVALQHLNLKRCD----NLTDI 170
Query: 73 GLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLIN 132
GL HL+ LQ LD + C ++D GL HL L L L+ R T G+ L+
Sbjct: 171 GLAHLRPLVALQHLDLDGCNNLTDAGLAHLTPLVALQHLNLRGCFKFTDAGLAHLTPLVA 230
Query: 133 LVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS--- 188
L L+L C+ + GL +LK L+ L+ LN+ WC+ +T + + L+ L L+ L +S
Sbjct: 231 LQYLNLSDCSNLTDAGLAHLKSLVALQHLNLSWCSKLTGAGLAHLTPLVALEDLDLSQCG 290
Query: 189 -----------------------CSKVTDSGIAYLKGLQKLTLLNLE 212
C K+TD+G+A+ K L LNL+
Sbjct: 291 KLTDAGLAHLALLTALQYLNLERCRKLTDAGLAHFKTLAASIYLNLQ 337
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLTGLTHLDL-F 380
L L+ + L ++D L L L +L+ LNL +TDTGLA LT LT L HL+L
Sbjct: 4 LVALQHLELGCCKLTDAGLAHLKSLVALQHLNLSWCDNLTDTGLAHLTPLTALQHLNLSV 63
Query: 381 GARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNL 440
++T +G A+L L +L++ G ++T AGL HL PL L
Sbjct: 64 CGKLTGAGLAHLTPLVALENLDLSQCG-----------------KLTDAGLAHLTPLVAL 106
Query: 441 RSLTLESCK 449
+ L + C+
Sbjct: 107 QHLGMRGCR 115
>gi|46447141|ref|YP_008506.1| hypothetical protein pc1507 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400782|emb|CAF24231.1| hypothetical protein pc1507 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 623
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 118/349 (33%), Positives = 176/349 (50%), Gaps = 36/349 (10%)
Query: 66 GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMK 125
+ +TD+ L+ LK C NL+ L C ++D GL HL L L L +T G+
Sbjct: 275 NAHLTDAHLLALKTCKNLKVLYLKKCCNLTDAGLSHLSPLVALQHLELSDCPRLTDAGLA 334
Query: 126 AFAGLINLVKLDLERCTRI--------------------------HGGLVNLKGLMKLES 159
L+ L L+L C+ H GL +L L+ L+
Sbjct: 335 HLTSLVALQYLNLSECSNFTDAGLAHLTPLLTLTHLNLSWCYNFTHAGLAHLTPLVALQH 394
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VT 217
LN+ C ITD+ + LS L L+ L + CS +TD+G+A+L L L L+L C +T
Sbjct: 395 LNLGHCRNITDAGLAHLSPLVALQHLNLGWCSNLTDAGLAHLSPLVALQHLDLGWCSNLT 454
Query: 218 AACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFN--EITDECLVHLKG 274
A L L++L +L +L+L+ C L+D G S + +L+ L+L N + D L HL
Sbjct: 455 DAGLAHLTSLVALQHLDLSWCYYLTDAGLAHLSPLVALQHLDLS-NCLSLKDAGLAHLTL 513
Query: 275 LTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLS 332
L L+ LNL+ C + D GL +LT L L+ L+LS + +GL HL+ L L+ +++S
Sbjct: 514 LVTLKYLNLNKCHNLTDAGLAHLTPLVALQHLDLSQCPNLTGTGLAHLNSLMALQHLDMS 573
Query: 333 F-TGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL 379
+ ++D L L L +L+ LNL ++TD GLA L L L HLDL
Sbjct: 574 WCHNLTDAGLTHLTPLVNLRHLNLTKCPKLTDAGLAHLAPLVALEHLDL 622
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 134/354 (37%), Positives = 192/354 (54%), Gaps = 18/354 (5%)
Query: 110 SLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCI 168
+L+F N +T + A NL L L++C + GL +L L+ L+ L + C +
Sbjct: 269 ALNFSENAHLTDAHLLALKTCKNLKVLYLKKCCNLTDAGLSHLSPLVALQHLELSDCPRL 328
Query: 169 TDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSA 226
TD+ + L+ L L+ L +S CS TD+G+A+L L LT LNL C T A L L+
Sbjct: 329 TDAGLAHLTSLVALQYLNLSECSNFTDAGLAHLTPLLTLTHLNLSWCYNFTHAGLAHLTP 388
Query: 227 LGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLD 284
L +L +LNL C+ ++D G S + +L+ LNLG+ + +TD L HL L L+ L+L
Sbjct: 389 LVALQHLNLGHCRNITDAGLAHLSPLVALQHLNLGWCSNLTDAGLAHLSPLVALQHLDLG 448
Query: 285 SCG-IGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLS-FTGISDGSL 341
C + D GL +LT L L+ L+LS + +GL HLS L L+ ++LS + D L
Sbjct: 449 WCSNLTDAGLAHLTSLVALQHLDLSWCYYLTDAGLAHLSPLVALQHLDLSNCLSLKDAGL 508
Query: 342 RKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLR 399
L L +LK LNL+ +TD GLA LT L L HLDL +T +G A+L + L+
Sbjct: 509 AHLTLLVTLKYLNLNKCHNLTDAGLAHLTPLVALQHLDLSQCPNLTGTGLAHLNSLMALQ 568
Query: 400 SLEICG-GGLTDAGLTGLVSL------NVSN-SRITSAGLRHLKPLKNLRSLTL 445
L++ LTDAGLT L L N++ ++T AGL HL PL L L L
Sbjct: 569 HLDMSWCHNLTDAGLTHLTPLVNLRHLNLTKCPKLTDAGLAHLAPLVALEHLDL 622
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 166/309 (53%), Gaps = 9/309 (2%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNF 90
ALQ L L P + D + + S +L ++LS S+ TD+GL HL L L+ ++
Sbjct: 316 ALQHLELSDCPRLTDAGLAHLTSL-VALQYLNLSECSNFTDAGLAHLTPLLTLTHLNLSW 374
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLV 149
C + GL HL L L L+ IT G+ + L+ L L+L C+ + GL
Sbjct: 375 CYNFTHAGLAHLTPLVALQHLNLGHCRNITDAGLAHLSPLVALQHLNLGWCSNLTDAGLA 434
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTL 208
+L L+ L+ L++ WC+ +TD+ + L+ L L+ L +S C +TD+G+A+L L L
Sbjct: 435 HLSPLVALQHLDLGWCSNLTDAGLAHLTSLVALQHLDLSWCYYLTDAGLAHLSPLVALQH 494
Query: 209 LNLEGC-PVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGF-NEIT 265
L+L C + A L L+ L +L YLNLN+C L+D G + + +L+ L+L +T
Sbjct: 495 LDLSNCLSLKDAGLAHLTLLVTLKYLNLNKCHNLTDAGLAHLTPLVALQHLDLSQCPNLT 554
Query: 266 DECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGL 323
L HL L L+ L++ C + D GL +LT L NL+ L L+ ++ +GL HL+ L
Sbjct: 555 GTGLAHLNSLMALQHLDMSWCHNLTDAGLTHLTPLVNLRHLNLTKCPKLTDAGLAHLAPL 614
Query: 324 TNLESINLS 332
LE ++LS
Sbjct: 615 VALEHLDLS 623
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 326 LESINLSFTG-ISDGSLRKLAGLSSLKSLNLDAR-QITDTGLAALTSLTGLTHLDLFG-A 382
+E++N S ++D L L +LK L L +TD GL+ L+ L L HL+L
Sbjct: 267 VEALNFSENAHLTDAHLLALKTCKNLKVLYLKKCCNLTDAGLSHLSPLVALQHLELSDCP 326
Query: 383 RITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGLVSLNVSNS-------RITSAGLRHL 434
R+TD+G A+L + L+ L + TDAGL L L T AGL HL
Sbjct: 327 RLTDAGLAHLTSLVALQYLNLSECSNFTDAGLAHLTPLLTLTHLNLSWCYNFTHAGLAHL 386
Query: 435 KPLKNLRSLTLESCK 449
PL L+ L L C+
Sbjct: 387 TPLVALQHLNLGHCR 401
>gi|442319589|ref|YP_007359610.1| hypothetical protein MYSTI_02610 [Myxococcus stipitatus DSM 14675]
gi|441487231|gb|AGC43926.1| hypothetical protein MYSTI_02610 [Myxococcus stipitatus DSM 14675]
Length = 600
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 222/483 (45%), Gaps = 61/483 (12%)
Query: 36 LCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQIS 95
LC + GV + + +G+SL+++ SGS + D+ L L+D + ++L + +++
Sbjct: 97 LCF-EATGVPEPTLLAALVRGTSLVTLRASGSSLGDAHLGALRDFTAWEALHLD-GTRVT 154
Query: 96 DGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLM 155
D GL HL GL L+ + AI+ +G+ GL L ++ L + GL L
Sbjct: 155 DAGLPHLSGLRRLSVVRLE-ETAISDKGLAFLEGLTTLRRVGLAGTSVSAQGLRFLSAQA 213
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 215
+LE L++ + TD + +L +L +S ++VTD+G+A L+ + LT L L
Sbjct: 214 ELEWLDL--SDTSTDDRVLAWVSGAHLHTLILSGTQVTDAGLARLRDMPHLTWLGLARTG 271
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
+T L + AL +L L+L Q++D G ++ SL+ L L + L HL GL
Sbjct: 272 LTDGGLAPIGALRALEALHLGETQVTDAGLLHLAESKSLEALVLTKTRLHGPGLQHLAGL 331
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE-------- 327
T LE L+LD + D + +L GL L+ LELS T + +GL L L+ LE
Sbjct: 332 TRLELLHLDDTRLDDAAMRHLRGLVALRELELSRTLITGAGLASLDALSALERLGVSGLA 391
Query: 328 --------------------------------------SINLSFTGISDGSLRKLAGLSS 349
++LS T +D L L LS
Sbjct: 392 VTADALAVLQKTERLTRLDLSHTPVGPEALAHVPSGLRELDLSRTAFNDEWLPSLRRLSR 451
Query: 350 LKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL- 408
L+SL + +TD GL L LT L L L G + SG A+L+ +L L++ L
Sbjct: 452 LQSLRAERTLLTDLGLGQLGELTELAALHLSGTLVNGSGLAHLQRLPHLAHLDLGATWLE 511
Query: 409 ---TDA--GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDL 463
T A GLT L L+++ R+ A L HL P L +L L VT + L+S L
Sbjct: 512 AHYTPALQGLTRLTWLSLARGRLGDAALGHLPP--GLHTLYLTRTGVTDAGLDSLRS--L 567
Query: 464 PNL 466
P+L
Sbjct: 568 PHL 570
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 180/358 (50%), Gaps = 11/358 (3%)
Query: 56 GSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
G+ L ++ LSG+ VTD+GL L+D +L L ++DGGL + L L +L
Sbjct: 235 GAHLHTLILSGTQVTDAGLARLRDMPHLTWLGLART-GLTDGGLAPIGALRALEALHLGE 293
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMK 174
+T G+ A +L L L + TR+HG GL +L GL +LE L++ + D+ M+
Sbjct: 294 TQ-VTDAGLLHLAESKSLEALVLTK-TRLHGPGLQHLAGLTRLELLHLD-DTRLDDAAMR 350
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L GL L+ L++S + +T +G+A L L L L + G VTA L L L L+
Sbjct: 351 HLRGLVALRELELSRTLITGAGLASLDALSALERLGVSGLAVTADALAVLQKTERLTRLD 410
Query: 235 LNRCQLSDDGCEKFSKIGS-LKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
L+ + G E + + S L+ L+L DE L L+ L+ L+SL + + D GL
Sbjct: 411 LSHTPV---GPEALAHVPSGLRELDLSRTAFNDEWLPSLRRLSRLQSLRAERTLLTDLGL 467
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
L L L L LS T V SGL HL L +L ++L T + L GL+ L L
Sbjct: 468 GQLGELTELAALHLSGTLVNGSGLAHLQRLPHLAHLDLGATWLEAHYTPALQGLTRLTWL 527
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
+L ++ D L L GL L L +TD+G LR+ +LR L++ G +TDA
Sbjct: 528 SLARGRLGDAALGHLPP--GLHTLYLTRTGVTDAGLDSLRSLPHLRQLDLRGTAVTDA 583
>gi|149174591|ref|ZP_01853217.1| hypothetical protein PM8797T_09969 [Planctomyces maris DSM 8797]
gi|148846701|gb|EDL61038.1| hypothetical protein PM8797T_09969 [Planctomyces maris DSM 8797]
Length = 346
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 128/235 (54%), Gaps = 7/235 (2%)
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
+ ++ +++ SLK+L+ + ITD + + +GL NLE+L L+ IGD GL +L
Sbjct: 100 YEFTEADLAAIAQLKSLKILDFSSSLITDSDMSYFQGLYNLEALILERTSIGDAGLYHLR 159
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA 357
L LK L L +T V GL +L LT L +NLS T ISD L L G+ +L++L LDA
Sbjct: 160 DLRKLKVLRLWETDVTDVGLSYLKDLTELTYLNLSETKISDAGLIHLKGMLNLQTLYLDA 219
Query: 358 RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT--- 414
Q++D GL L L L LDL A +TD+G +L +NL+ L + ++D GL
Sbjct: 220 TQVSDRGLIYLKELPKLETLDLLDAEVTDAGLVHLSECRNLKKLTLADTQISDQGLVYLG 279
Query: 415 ---GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
L L++ + + AGL HL+ LK+L L ES K+T RL LP L
Sbjct: 280 KLKELHELDIRYTNTSDAGLVHLQGLKSLAYLNWESTKITDAGYTRLHEF-LPKL 333
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 125/243 (51%), Gaps = 8/243 (3%)
Query: 161 NIKWCNCI--------TDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
N+ W + + T++D+ ++ L +LK L S S +TDS ++Y +GL L L LE
Sbjct: 87 NVTWISSVGYGDDYEFTEADLAAIAQLKSLKILDFSSSLITDSDMSYFQGLYNLEALILE 146
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
+ A L L L L L L ++D G + L LNL +I+D L+HL
Sbjct: 147 RTSIGDAGLYHLRDLRKLKVLRLWETDVTDVGLSYLKDLTELTYLNLSETKISDAGLIHL 206
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
KG+ NL++L LD+ + D GL+ L L L+ L+L D +V +GL HLS NL+ + L+
Sbjct: 207 KGMLNLQTLYLDATQVSDRGLIYLKELPKLETLDLLDAEVTDAGLVHLSECRNLKKLTLA 266
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
T ISD L L L L L++ +D GL L L L +L+ +ITD+G L
Sbjct: 267 DTQISDQGLVYLGKLKELHELDIRYTNTSDAGLVHLQGLKSLAYLNWESTKITDAGYTRL 326
Query: 393 RNF 395
F
Sbjct: 327 HEF 329
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 125/258 (48%), Gaps = 30/258 (11%)
Query: 87 DFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG 146
D+ F ++ L + L +L L F ++ IT M F GL NL L LER +
Sbjct: 99 DYEF----TEADLAAIAQLKSLKILDFS-SSLITDSDMSYFQGLYNLEALILERTSIGDA 153
Query: 147 GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKL 206
GL +L+ L KL+ L + W +TD + L LT L L +S +K++D+G+ +LKG
Sbjct: 154 GLYHLRDLRKLKVLRL-WETDVTDVGLSYLKDLTELTYLNLSETKISDAGLIHLKG---- 208
Query: 207 TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
+LNL+ L L+ Q+SD G ++ L+ L+L E+TD
Sbjct: 209 -MLNLQT-------------------LYLDATQVSDRGLIYLKELPKLETLDLLDAEVTD 248
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
LVHL NL+ L L I D+GLV L L L L++ T +GL HL GL +L
Sbjct: 249 AGLVHLSECRNLKKLTLADTQISDQGLVYLGKLKELHELDIRYTNTSDAGLVHLQGLKSL 308
Query: 327 ESINLSFTGISDGSLRKL 344
+N T I+D +L
Sbjct: 309 AYLNWESTKITDAGYTRL 326
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 112/243 (46%), Gaps = 27/243 (11%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
+Q SL +D S S +TDS + + + NL++L I D GL HLR L L L
Sbjct: 111 AQLKSLKILDFSSSLITDSDMSYFQGLYNLEALILERT-SIGDAGLYHLRDLRKLKVLRL 169
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
+ +T G+ L L L+L GL++LKG++
Sbjct: 170 WETD-VTDVGLSYLKDLTELTYLNLSETKISDAGLIHLKGML------------------ 210
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
NL++L + ++V+D G+ YLK L KL L+L VT A L LS +L L
Sbjct: 211 -------NLQTLYLDATQVSDRGLIYLKELPKLETLDLLDAEVTDAGLVHLSECRNLKKL 263
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
L Q+SD G K+ L L++ + +D LVHL+GL +L LN +S I D G
Sbjct: 264 TLADTQISDQGLVYLGKLKELHELDIRYTNTSDAGLVHLQGLKSLAYLNWESTKITDAGY 323
Query: 294 VNL 296
L
Sbjct: 324 TRL 326
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 20/158 (12%)
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
D + + L ++ L +L+ ++ S + I+D + GL +L++L L+ I D GL L
Sbjct: 99 DYEFTEADLAAIAQLKSLKILDFSSSLITDSDMSYFQGLYNLEALILERTSIGDAGLYHL 158
Query: 369 TSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITS 428
L L L L+ +TD G +YL++ LT L LN+S ++I+
Sbjct: 159 RDLRKLKVLRLWETDVTDVGLSYLKD------------------LTELTYLNLSETKISD 200
Query: 429 AGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
AGL HLK + NL++L L++ +V+ + L ++LP L
Sbjct: 201 AGLIHLKGMLNLQTLYLDATQVSDRGLIYL--KELPKL 236
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
++DL ++VTD+GL+HL +C NL+ L QISD GL +L L L L R N
Sbjct: 238 TLDLLDAEVTDAGLVHLSECRNLKKLTLA-DTQISDQGLVYLGKLKELHELDIRYTNTSD 296
Query: 121 AQGMKAFAGLINLVKLDLERC-------TRIHGGLVNLKGLMKLESLNIK 163
A G+ GL +L L+ E TR+H L L + ++ K
Sbjct: 297 A-GLVHLQGLKSLAYLNWESTKITDAGYTRLHEFLPKLSRTQQFPTIIFK 345
>gi|46446916|ref|YP_008281.1| hypothetical protein pc1282 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400557|emb|CAF24006.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila
UWE25]
Length = 1082
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 164/318 (51%), Gaps = 30/318 (9%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD+ L+ LK+C NL++L C ++D GL HL L L L + T G+
Sbjct: 781 LTDAHLLALKNCKNLKALHLQECPNLTDAGLAHLTSLVTLQHLDLSYCSNFTDAGLAHLR 840
Query: 129 GLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L+ L L+L C + GL +L L+ L+ L++ +C+ TD+ + L+ L L+ L +
Sbjct: 841 PLVALTHLNLRWCRNLTDAGLAHLTPLVALKYLDLSYCSNFTDAGLTHLTPLVTLQHLDL 900
Query: 188 S-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQLSDDGC 245
S CS TD+G+A+L+ L LT LNL C T A L L+ L +L +LNLN C
Sbjct: 901 SCCSNFTDAGLAHLRPLVALTHLNLRWCHNFTDAGLAHLTPLVALQHLNLNLCW------ 954
Query: 246 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKC 304
++TD L HL+ L L++L+L C D GL +LT L L+
Sbjct: 955 -----------------KLTDAGLAHLRPLVALQNLDLSYCSNFTDAGLAHLTPLVVLQH 997
Query: 305 LELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQIT 361
L+LS ++ +GL HL+ L L+ ++LS+ ++D LR L L +L+ L L + T
Sbjct: 998 LDLSSCKKLTDAGLAHLTPLVALQHLDLSWCNHLTDAGLRHLTPLLALQDLYLYSCENFT 1057
Query: 362 DTGLAALTSLTGLTHLDL 379
+ GLA S HL+L
Sbjct: 1058 EVGLAHFKSSVASLHLNL 1075
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 153/283 (54%), Gaps = 10/283 (3%)
Query: 13 ELVYSR--CLTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SD 68
EL +S+ LT+ L A ++C L+ L L + P + D + + S +L +DLS S+
Sbjct: 772 ELNFSKNIFLTDAHLLALKNCKNLKALHLQECPNLTDAGLAHLTS-LVTLQHLDLSYCSN 830
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
TD+GL HL+ L L+ +C ++D GL HL L L L + T G+
Sbjct: 831 FTDAGLAHLRPLVALTHLNLRWCRNLTDAGLAHLTPLVALKYLDLSYCSNFTDAGLTHLT 890
Query: 129 GLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L+ L LDL C+ GL +L+ L+ L LN++WC+ TD+ + L+ L L+ L +
Sbjct: 891 PLVTLQHLDLSCCSNFTDAGLAHLRPLVALTHLNLRWCHNFTDAGLAHLTPLVALQHLNL 950
Query: 188 S-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QLSDDG 244
+ C K+TD+G+A+L+ L L L+L C T A L L+ L L +L+L+ C +L+D G
Sbjct: 951 NLCWKLTDAGLAHLRPLVALQNLDLSYCSNFTDAGLAHLTPLVVLQHLDLSSCKKLTDAG 1010
Query: 245 CEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC 286
+ + +L+ L+L + N +TD L HL L L+ L L SC
Sbjct: 1011 LAHLTPLVALQHLDLSWCNHLTDAGLRHLTPLLALQDLYLYSC 1053
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 153/304 (50%), Gaps = 28/304 (9%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
++E LN +TD+ + L NLK+L + C +TD+G+A+L L L L+L C
Sbjct: 769 EIEELNFSKNIFLTDAHLLALKNCKNLKALHLQECPNLTDAGLAHLTSLVTLQHLDLSYC 828
Query: 215 P-VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGF-NEITDECLVH 271
T A L L L +L +LNL C+ L+D G + + +LK L+L + + TD L H
Sbjct: 829 SNFTDAGLAHLRPLVALTHLNLRWCRNLTDAGLAHLTPLVALKYLDLSYCSNFTDAGLTH 888
Query: 272 LKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQ-VGSSGLRHLSGLTNLESI 329
L L L+ L+L C D GL +L L L L L +GL HL+ L L+ +
Sbjct: 889 LTPLVTLQHLDLSCCSNFTDAGLAHLRPLVALTHLNLRWCHNFTDAGLAHLTPLVALQHL 948
Query: 330 NLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFG-ARITD 386
NL+ ++D L L L +L++L+L TD GLA LT L L HLDL ++TD
Sbjct: 949 NLNLCWKLTDAGLAHLRPLVALQNLDLSYCSNFTDAGLAHLTPLVVLQHLDLSSCKKLTD 1008
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN-SRITSAGLRHLKPLKNLRSLTL 445
+G A+L L L L++S + +T AGLRHL PL L+ L L
Sbjct: 1009 AGLAHL------------------TPLVALQHLDLSWCNHLTDAGLRHLTPLLALQDLYL 1050
Query: 446 ESCK 449
SC+
Sbjct: 1051 YSCE 1054
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 163/333 (48%), Gaps = 45/333 (13%)
Query: 102 LRGLSN-LTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLES 159
L+ SN + L+F +N +T + A NL L L+ C + GL +L L+ L+
Sbjct: 763 LKYFSNEIEELNFSKNIFLTDAHLLALKNCKNLKALHLQECPNLTDAGLAHLTSLVTLQH 822
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTA 218
L++ +C S TD+G+A+L+ L LT LNL C +T
Sbjct: 823 LDLSYC------------------------SNFTDAGLAHLRPLVALTHLNLRWCRNLTD 858
Query: 219 ACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLG-FNEITDECLVHLKGLT 276
A L L+ L +L YL+L+ C +D G + + +L+ L+L + TD L HL+ L
Sbjct: 859 AGLAHLTPLVALKYLDLSYCSNFTDAGLTHLTPLVTLQHLDLSCCSNFTDAGLAHLRPLV 918
Query: 277 NLESLNLDSC-GIGDEGLVNLTGLCNLK------CLELSDTQVGSSGLRHLSGLTNLESI 329
L LNL C D GL +LT L L+ C +L+D +GL HL L L+++
Sbjct: 919 ALTHLNLRWCHNFTDAGLAHLTPLVALQHLNLNLCWKLTD-----AGLAHLRPLVALQNL 973
Query: 330 NLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL-FGARITD 386
+LS+ + +D L L L L+ L+L + +++TD GLA LT L L HLDL + +TD
Sbjct: 974 DLSYCSNFTDAGLAHLTPLVVLQHLDLSSCKKLTDAGLAHLTPLVALQHLDLSWCNHLTD 1033
Query: 387 SGAAYLRNFKNLRSLEICG-GGLTDAGLTGLVS 418
+G +L L+ L + T+ GL S
Sbjct: 1034 AGLRHLTPLLALQDLYLYSCENFTEVGLAHFKS 1066
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 110/199 (55%), Gaps = 11/199 (5%)
Query: 58 SLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+L +DLS S+ TD+GL HL LQ LD + C +D GL HLR L LT L+ R
Sbjct: 869 ALKYLDLSYCSNFTDAGLTHLTPLVTLQHLDLSCCSNFTDAGLAHLRPLVALTHLNLRWC 928
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+ T G+ L+ L L+L C ++ GL +L+ L+ L++L++ +C+ TD+ +
Sbjct: 929 HNFTDAGLAHLTPLVALQHLNLNLCWKLTDAGLAHLRPLVALQNLDLSYCSNFTDAGLAH 988
Query: 176 LSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYL 233
L+ L L+ L + SC K+TD+G+A+L L L L+L C +T A L L+ L +L L
Sbjct: 989 LTPLVVLQHLDLSSCKKLTDAGLAHLTPLVALQHLDLSWCNHLTDAGLRHLTPLLALQDL 1048
Query: 234 NLNRCQLSDDGCEKFSKIG 252
L CE F+++G
Sbjct: 1049 YLY-------SCENFTEVG 1060
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 2/149 (1%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+ TD+GL HL LQ L+ N C +++D GL HLR L L +L + T G+
Sbjct: 930 NFTDAGLAHLTPLVALQHLNLNLCWKLTDAGLAHLRPLVALQNLDLSYCSNFTDAGLAHL 989
Query: 128 AGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
L+ L LDL C ++ GL +L L+ L+ L++ WCN +TD+ ++ L+ L L+ L
Sbjct: 990 TPLVVLQHLDLSSCKKLTDAGLAHLTPLVALQHLDLSWCNHLTDAGLRHLTPLLALQDLY 1049
Query: 187 I-SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
+ SC T+ G+A+ K LNL+ C
Sbjct: 1050 LYSCENFTEVGLAHFKSSVASLHLNLKWC 1078
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 59 LLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
L +DLS +TD+GL HL LQ LD ++C ++D GL HL L L L
Sbjct: 995 LQHLDLSSCKKLTDAGLAHLTPLVALQHLDLSWCNHLTDAGLRHLTPLLALQDLYLYSCE 1054
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIH 145
T G+ F + + L+L+ C R
Sbjct: 1055 NFTEVGLAHFKSSVASLHLNLKWCKRFQ 1082
>gi|168705463|ref|ZP_02737740.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 362
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 163/306 (53%), Gaps = 9/306 (2%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
+TD+D+K L+ LT L L +S + VTD+G+ +L L KLT LNL G +T A L+
Sbjct: 53 KTVTDADLKALAPLTGLTDLDLSSTPVTDAGLKHLAPLTKLTALNLGGTKITDAGPTELA 112
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
L L LNL+ Q++D G ++ +++ +L L+L +T+ L HL LT + SL+L
Sbjct: 113 PLAVLTDLNLSSTQVTDAGLKEVARLRTLVALDLSHTGVTNAGLGHLT-LTKMRSLSLRG 171
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
I D GL + + ++ L+LS T + GL+ L + ++LS T ++ L++LA
Sbjct: 172 TKITDGGLREIR-IMSVSGLDLSGTALTDEGLKDLGLFEEITGLDLSDTKVTSNGLKELA 230
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
+LK L+L ++ D GL L L L L L G +T +G L + LR LE+ G
Sbjct: 231 SQPTLKFLSLSRTKVGDAGLKHLAPLKRLESLYLNGTGVTGTGVKELAPLERLRILELTG 290
Query: 406 GGLTDAGLTGLVSL------NVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
+T GL L +L +S++ +T GL+ + LK L +L L KVT + L+
Sbjct: 291 TMVTGGGLKHLSTLPRLAILRLSDAAVTDEGLKDIAHLKTLLALDLYRTKVTGAGVAELR 350
Query: 460 SRDLPN 465
+ LP
Sbjct: 351 -KALPR 355
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 154/302 (50%), Gaps = 3/302 (0%)
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
R +T +KA A L L LDL GL +L L KL +LN+ ITD+
Sbjct: 51 RGKTVTDADLKALAPLTGLTDLDLSSTPVTDAGLKHLAPLTKLTALNLGGTK-ITDAGPT 109
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L+ L L L +S ++VTD+G+ + L+ L L+L VT A L L+ L + L+
Sbjct: 110 ELAPLAVLTDLNLSSTQVTDAGLKEVARLRTLVALDLSHTGVTNAGLGHLT-LTKMRSLS 168
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
L +++D G + +I S+ L+L +TDE L L + L+L + GL
Sbjct: 169 LRGTKITDGGLREI-RIMSVSGLDLSGTALTDEGLKDLGLFEEITGLDLSDTKVTSNGLK 227
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
L LK L LS T+VG +GL+HL+ L LES+ L+ TG++ +++LA L L+ L
Sbjct: 228 ELASQPTLKFLSLSRTKVGDAGLKHLAPLKRLESLYLNGTGVTGTGVKELAPLERLRILE 287
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT 414
L +T GL L++L L L L A +TD G + + K L +L++ +T AG+
Sbjct: 288 LTGTMVTGGGLKHLSTLPRLAILRLSDAAVTDEGLKDIAHLKTLLALDLYRTKVTGAGVA 347
Query: 415 GL 416
L
Sbjct: 348 EL 349
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 157/312 (50%), Gaps = 29/312 (9%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+ L +DLS + VTD+GL HL + L +L+ +I+D G L L+ LT L+ +
Sbjct: 67 TGLTDLDLSSTPVTDAGLKHLAPLTKLTALNLGGT-KITDAGPTELAPLAVLTDLNL-SS 124
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+T G+K A L LV LDL H G+ N GL L
Sbjct: 125 TQVTDAGLKEVARLRTLVALDLS-----HTGVTN-AGLGHLT------------------ 160
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
LT ++SL + +K+TD G+ ++ + ++ L+L G +T L L + L+L+
Sbjct: 161 --LTKMRSLSLRGTKITDGGLREIR-IMSVSGLDLSGTALTDEGLKDLGLFEEITGLDLS 217
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
+++ +G ++ + +LK L+L ++ D L HL L LESL L+ G+ G+ L
Sbjct: 218 DTKVTSNGLKELASQPTLKFLSLSRTKVGDAGLKHLAPLKRLESLYLNGTGVTGTGVKEL 277
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
L L+ LEL+ T V GL+HLS L L + LS ++D L+ +A L +L +L+L
Sbjct: 278 APLERLRILELTGTMVTGGGLKHLSTLPRLAILRLSDAAVTDEGLKDIAHLKTLLALDLY 337
Query: 357 ARQITDTGLAAL 368
++T G+A L
Sbjct: 338 RTKVTGAGVAEL 349
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 139/271 (51%), Gaps = 10/271 (3%)
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
+T + L G VT A L +L+ L L L+L+ ++D G + + + L LNLG +IT
Sbjct: 45 VTHVMLRGKTVTDADLKALAPLTGLTDLDLSSTPVTDAGLKHLAPLTKLTALNLGGTKIT 104
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
D L L L LNL S + D GL + L L L+LS T V ++GL HL+ LT
Sbjct: 105 DAGPTELAPLAVLTDLNLSSTQVTDAGLKEVARLRTLVALDLSHTGVTNAGLGHLT-LTK 163
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
+ S++L T I+DG LR++ + S+ L+L +TD GL L +T LDL ++T
Sbjct: 164 MRSLSLRGTKITDGGLREIR-IMSVSGLDLSGTALTDEGLKDLGLFEEITGLDLSDTKVT 222
Query: 386 DSGAAYLRNFKNLRSLEICGGGLTDAGLTGLV------SLNVSNSRITSAGLRHLKPLKN 439
+G L + L+ L + + DAGL L SL ++ + +T G++ L PL+
Sbjct: 223 SNGLKELASQPTLKFLSLSRTKVGDAGLKHLAPLKRLESLYLNGTGVTGTGVKELAPLER 282
Query: 440 LRSLTLESCKVTANDIKRLQSRDLPNLVSFR 470
LR L L VT +K L + LP L R
Sbjct: 283 LRILELTGTMVTGGGLKHLST--LPRLAILR 311
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 125/237 (52%), Gaps = 8/237 (3%)
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
G + ++ L ++D + + + L L+L +TD L HL LT L +LNL
Sbjct: 43 GVVTHVMLRGKTVTDADLKALAPLTGLTDLDLSSTPVTDAGLKHLAPLTKLTALNLGGTK 102
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
I D G L L L L LS TQV +GL+ ++ L L +++LS TG+++ L L L
Sbjct: 103 ITDAGPTELAPLAVLTDLNLSSTQVTDAGLKEVARLRTLVALDLSHTGVTNAGLGHLT-L 161
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGG 407
+ ++SL+L +ITD GL + ++ ++ LDL G +TD G L F+ + L++
Sbjct: 162 TKMRSLSLRGTKITDGGLREIRIMS-VSGLDLSGTALTDEGLKDLGLFEEITGLDLSDTK 220
Query: 408 LTDAGLTGLVS------LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
+T GL L S L++S +++ AGL+HL PLK L SL L VT +K L
Sbjct: 221 VTSNGLKELASQPTLKFLSLSRTKVGDAGLKHLAPLKRLESLYLNGTGVTGTGVKEL 277
>gi|46447129|ref|YP_008494.1| hypothetical protein pc1495 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400770|emb|CAF24219.1| hypothetical protein pc1495 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 559
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 181/345 (52%), Gaps = 36/345 (10%)
Query: 20 LTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHL 77
LT+ A +DC L+ L L + D + + + ++L ++LS +TD+GL+HL
Sbjct: 238 LTDAHFSALKDCKNLKVLHLVSCQAITDDRLAHL-TPLTALQHLNLSKCRKLTDTGLVHL 296
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLD 137
+ LQ LD ++C ++D GL HL L L L+ R F L +
Sbjct: 297 TPLTALQHLDLSYCKNLTDAGLAHLTPLKALQHLNLR-----------GFGKLTD----- 340
Query: 138 LERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSG 196
GLV+L L L+ L++ WC +TD+ + L+ LT L+ L +S +TD+G
Sbjct: 341 --------AGLVHLTPLTALQYLDLSWCKNLTDAGLAHLTPLTGLQHLNLSGWYHLTDAG 392
Query: 197 IAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSL 254
+A L L L L+L C +T+A L+ L++L +L +L L+ C L+D G + + +L
Sbjct: 393 LARLIFLTALQHLDLSDCENLTSAGLERLTSLTALQHLGLSYCMNLTDAGLIHLTPLTAL 452
Query: 255 KVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQ 311
+ LNL G +TD LVHL LT L+ LNL C + D GL LT L L+ L LS
Sbjct: 453 QHLNLSGCFHLTDAGLVHLTPLTALQHLNLGGCENLTDAGLAYLTPLTALQHLNLSRCKH 512
Query: 312 VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL 355
+ +GL HL+ LT L+ +NLS+ ++D L + L++ SLNL
Sbjct: 513 LTEAGLTHLASLTALQHLNLSYCDNLTDAGLERFKALAA--SLNL 555
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/310 (37%), Positives = 166/310 (53%), Gaps = 17/310 (5%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQ-ISCSKVTDSGIAYLKGLQKLTLLNLEGC 214
++E+LN +TD+ L NLK L +SC +TD +A+L L L LNL C
Sbjct: 226 EIEALNFSNNTYLTDAHFSALKDCKNLKVLHLVSCQAITDDRLAHLTPLTALQHLNLSKC 285
Query: 215 -PVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNL-GFNEITDECLVH 271
+T L L+ L +L +L+L+ C+ L+D G + + +L+ LNL GF ++TD LVH
Sbjct: 286 RKLTDTGLVHLTPLTALQHLDLSYCKNLTDAGLAHLTPLKALQHLNLRGFGKLTDAGLVH 345
Query: 272 LKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESI 329
L LT L+ L+L C + D GL +LT L L+ L LS + +GL L LT L+ +
Sbjct: 346 LTPLTALQYLDLSWCKNLTDAGLAHLTPLTGLQHLNLSGWYHLTDAGLARLIFLTALQHL 405
Query: 330 NLS-FTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGA-RITD 386
+LS ++ L +L L++L+ L L +TD GL LT LT L HL+L G +TD
Sbjct: 406 DLSDCENLTSAGLERLTSLTALQHLGLSYCMNLTDAGLIHLTPLTALQHLNLSGCFHLTD 465
Query: 387 SGAAYLRNFKNLRSLEICG-GGLTDAGL------TGLVSLNVSN-SRITSAGLRHLKPLK 438
+G +L L+ L + G LTDAGL T L LN+S +T AGL HL L
Sbjct: 466 AGLVHLTPLTALQHLNLGGCENLTDAGLAYLTPLTALQHLNLSRCKHLTEAGLTHLASLT 525
Query: 439 NLRSLTLESC 448
L+ L L C
Sbjct: 526 ALQHLNLSYC 535
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 181/339 (53%), Gaps = 24/339 (7%)
Query: 102 LRGLSN-LTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGG-LVNLKGLMKLES 159
+ LSN + +L+F N +T A NL L L C I L +L L L+
Sbjct: 220 INHLSNEIEALNFSNNTYLTDAHFSALKDCKNLKVLHLVSCQAITDDRLAHLTPLTALQH 279
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVT 217
LN+ C +TD+ + L+ LT L+ L +S C +TD+G+A+L L+ L LNL G +T
Sbjct: 280 LNLSKCRKLTDTGLVHLTPLTALQHLDLSYCKNLTDAGLAHLTPLKALQHLNLRGFGKLT 339
Query: 218 AACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGL 275
A L L+ L +L YL+L+ C+ L+D G + + L+ LNL G+ +TD L L L
Sbjct: 340 DAGLVHLTPLTALQYLDLSWCKNLTDAGLAHLTPLTGLQHLNLSGWYHLTDAGLARLIFL 399
Query: 276 TNLESLNLDSC----GIGDEGLVNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLES 328
T L+ L+L C G E L +LT L +L C+ L+D +GL HL+ LT L+
Sbjct: 400 TALQHLDLSDCENLTSAGLERLTSLTALQHLGLSYCMNLTD-----AGLIHLTPLTALQH 454
Query: 329 INLS--FTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGAR-I 384
+NLS F ++D L L L++L+ LNL +TD GLA LT LT L HL+L + +
Sbjct: 455 LNLSGCF-HLTDAGLVHLTPLTALQHLNLGGCENLTDAGLAYLTPLTALQHLNLSRCKHL 513
Query: 385 TDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGLVSLNVS 422
T++G +L + L+ L + LTDAGL +L S
Sbjct: 514 TEAGLTHLASLTALQHLNLSYCDNLTDAGLERFKALAAS 552
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 72/137 (52%), Gaps = 23/137 (16%)
Query: 319 HLSGLT---NLESINL-SFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTG 373
H S L NL+ ++L S I+D L L L++L+ LNL R++TDTGL LT LT
Sbjct: 242 HFSALKDCKNLKVLHLVSCQAITDDRLAHLTPLTALQHLNLSKCRKLTDTGLVHLTPLTA 301
Query: 374 LTHLDL-FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLR 432
L HLDL + +TD+G A+L K L+ L + G G ++T AGL
Sbjct: 302 LQHLDLSYCKNLTDAGLAHLTPLKALQHLNLRGFG-----------------KLTDAGLV 344
Query: 433 HLKPLKNLRSLTLESCK 449
HL PL L+ L L CK
Sbjct: 345 HLTPLTALQYLDLSWCK 361
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 57 SSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
++L ++L G ++TD+GL +L + LQ L+ + C +++ GL HL L+ L L+
Sbjct: 475 TALQHLNLGGCENLTDAGLAYLTPLTALQHLNLSRCKHLTEAGLTHLASLTALQHLNLSY 534
Query: 116 NNAITAQGMKAFAGLINLVKLDLER 140
+ +T G++ F L + L + R
Sbjct: 535 CDNLTDAGLERFKALAASLNLKIIR 559
>gi|168701031|ref|ZP_02733308.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 389
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 174/342 (50%), Gaps = 29/342 (8%)
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
FAGL NL +L L ++ KL LN+ + ITD ++ ++GLT L L
Sbjct: 65 FAGLTNL---NLTNTQVTDAALKDVARFPKLTVLNVSYTQ-ITDEGLREIAGLTELTDLV 120
Query: 187 ISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCE 246
+ +KV+ SG+ +L L KL L+L VT A L L + L L+L ++D G +
Sbjct: 121 LDYTKVSGSGLKHLAALTKLRTLSLGSKIVTDAGLRGLVGVRGLRQLDLRETSVTDAGLK 180
Query: 247 KFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE 306
+ + + LK L L +T L L LT L+ L L I +GL LTGL +L+ LE
Sbjct: 181 EIAPLSELKTLMLVNAPVTGPGLKDLALLTKLQFLFLSGTRITGDGLSELTGLKSLRLLE 240
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL- 365
L T + +GL+ L+G L + LS T ++ L++LA L L L+L + +ITD L
Sbjct: 241 LGGTPLTDAGLKQLAGFDTLGHLGLSNTKVTGAGLKELAALKQLSGLDLGSTKITDADLK 300
Query: 366 --AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN 423
AALT+LTGLT D +TD+G +RN A LT L LN+++
Sbjct: 301 EIAALTNLTGLTMRD---TPVTDAG---VRNL---------------APLTKLRRLNLTH 339
Query: 424 SRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 465
+++T+A + L K+L S+ L VT K L++ LPN
Sbjct: 340 TKVTNACAKTLATFKHLTSVDLHQTDVTEEGGKELKAA-LPN 380
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 167/338 (49%), Gaps = 29/338 (8%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+ L +++L+ + VTD+ L + L L+ ++ QI+D GL + GL+ LT L
Sbjct: 66 AGLTNLNLTNTQVTDAALKDVARFPKLTVLNVSYT-QITDEGLREIAGLTELTDLV---- 120
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKP 175
LD T++ G GL +L L KL +L++ +TD+ ++
Sbjct: 121 -------------------LD---YTKVSGSGLKHLAALTKLRTLSL-GSKIVTDAGLRG 157
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L G+ L+ L + + VTD+G+ + L +L L L PVT L L+ L L +L L
Sbjct: 158 LVGVRGLRQLDLRETSVTDAGLKEIAPLSELKTLMLVNAPVTGPGLKDLALLTKLQFLFL 217
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
+ +++ DG + + + SL++L LG +TD L L G L L L + + GL
Sbjct: 218 SGTRITGDGLSELTGLKSLRLLELGGTPLTDAGLKQLAGFDTLGHLGLSNTKVTGAGLKE 277
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L L L L+L T++ + L+ ++ LTNL + + T ++D +R LA L+ L+ LNL
Sbjct: 278 LAALKQLSGLDLGSTKITDADLKEIAALTNLTGLTMRDTPVTDAGVRNLAPLTKLRRLNL 337
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
++T+ L + LT +DL +T+ G L+
Sbjct: 338 THTKVTNACAKTLATFKHLTSVDLHQTDVTEEGGKELK 375
>gi|306012339|gb|ADM75223.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012351|gb|ADM75229.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012359|gb|ADM75233.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012371|gb|ADM75239.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012381|gb|ADM75244.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012391|gb|ADM75249.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012395|gb|ADM75251.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012397|gb|ADM75252.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012401|gb|ADM75254.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012403|gb|ADM75255.1| leucine rich repeat-like protein, partial [Picea sitchensis]
Length = 137
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/135 (52%), Positives = 89/135 (65%), Gaps = 31/135 (22%)
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG-------------- 412
ALTSLTGLTHLDLFGARITD G + LR FK L+SLE+CGG +TDAG
Sbjct: 1 ALTSLTGLTHLDLFGARITDYGTSCLRYFKKLQSLELCGGSITDAGVKNIKDLTSMMSLN 60
Query: 413 -----------------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 455
+T LVSLN+SN+R+T+AGL+HL+PLKNL SL+L++CKVT +I
Sbjct: 61 LSQNSHLTDGALESISGMTALVSLNISNTRVTNAGLQHLRPLKNLTSLSLQACKVTWPEI 120
Query: 456 KRLQSRDLPNLVSFR 470
++LQ+ LPNL R
Sbjct: 121 RKLQATALPNLAGVR 135
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L+ LT L L + +++TD G + L+ +KL L L G +T A + ++ L S+ LNL
Sbjct: 2 LTSLTGLTHLDLFGARITDYGTSCLRYFKKLQSLELCGGSITDAGVKNIKDLTSMMSLNL 61
Query: 236 NR-CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
++ L+D E S + +L LN+ +T+ L HL+ L NL SL+L +C + +
Sbjct: 62 SQNSHLTDGALESISGMTALVSLNISNTRVTNAGLQHLRPLKNLTSLSLQACKVTWPEIR 121
Query: 295 NL--TGLCNLKCLEL 307
L T L NL + L
Sbjct: 122 KLQATALPNLAGVRL 136
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
L L GL++L R IT G L L+L + G+ N+K L +
Sbjct: 1 ALTSLTGLTHLDLFGAR----ITDYGTSCLRYFKKLQSLELCGGSITDAGVKNIKDLTSM 56
Query: 158 ESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
SLN+ + +TD ++ +SG+T L SL IS ++VT++G+ +L+ L+ LT L+L+ C VT
Sbjct: 57 MSLNLSQNSHLTDGALESISGMTALVSLNISNTRVTNAGLQHLRPLKNLTSLSLQACKVT 116
Query: 218 AACLDSLSA 226
+ L A
Sbjct: 117 WPEIRKLQA 125
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
+L++L L +L+L +++D G L+ L L ITD + ++K LT++ SLN
Sbjct: 1 ALTSLTGLTHLDLFGARITDYGTSCLRYFKKLQSLELCGGSITDAGVKNIKDLTSMMSLN 60
Query: 283 L-DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 341
L + + D L +++G+ L L +S+T+V ++GL+HL L NL S++L ++ +
Sbjct: 61 LSQNSHLTDGALESISGMTALVSLNISNTRVTNAGLQHLRPLKNLTSLSLQACKVTWPEI 120
Query: 342 RKL--AGLSSLKSLNLD 356
RKL L +L + LD
Sbjct: 121 RKLQATALPNLAGVRLD 137
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
L LT L L+L I D G L L+ LEL + +G++++ LT++ S+NL
Sbjct: 2 LTSLTGLTHLDLFGARITDYGTSCLRYFKKLQSLELCGGSITDAGVKNIKDLTSMMSLNL 61
Query: 332 SF-TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
S + ++DG+L ++G+++L SLN+ ++T+ GL L L LT L L ++T
Sbjct: 62 SQNSHLTDGALESISGMTALVSLNISNTRVTNAGLQHLRPLKNLTSLSLQACKVT 116
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 78/134 (58%), Gaps = 6/134 (4%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC-IQISDGGLEHLRGLSNLTSLSFRR 115
+ L +DL G+ +TD G L+ LQSL+ C I+D G+++++ L+++ SL+ +
Sbjct: 6 TGLTHLDLFGARITDYGTSCLRYFKKLQSLE--LCGGSITDAGVKNIKDLTSMMSLNLSQ 63
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
N+ +T +++ +G+ LV L++ + GL +L+ L L SL+++ C +T +++
Sbjct: 64 NSHLTDGALESISGMTALVSLNISNTRVTNAGLQHLRPLKNLTSLSLQACK-VTWPEIRK 122
Query: 176 L--SGLTNLKSLQI 187
L + L NL +++
Sbjct: 123 LQATALPNLAGVRL 136
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Query: 126 AFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCN-CITDSDMKPLSGLTNLKS 184
A L L LDL G L+ KL+SL + C ITD+ +K + LT++ S
Sbjct: 1 ALTSLTGLTHLDLFGARITDYGTSCLRYFKKLQSLEL--CGGSITDAGVKNIKDLTSMMS 58
Query: 185 LQISC-SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
L +S S +TD + + G+ L LN+ VT A L L L +L L+L C+++
Sbjct: 59 LNLSQNSHLTDGALESISGMTALVSLNISNTRVTNAGLQHLRPLKNLTSLSLQACKVTWP 118
Query: 244 GCEKF 248
K
Sbjct: 119 EIRKL 123
>gi|46447548|ref|YP_008913.1| hypothetical protein pc1914 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401189|emb|CAF24638.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 528
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 180/348 (51%), Gaps = 33/348 (9%)
Query: 65 SGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+ +T++ L+ LKDC N++ L F C ++D GL HL L L L +T G+
Sbjct: 203 ENTHLTNAHLLALKDCKNIEVLYFKKCRGVTDAGLAHLVPLKGLQHLDLSYCENLTDAGL 262
Query: 125 KAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
L L L+L C + GLV+L L+ L+ L++ +C +TD+ + L+ LT L+
Sbjct: 263 AYLKPLTALQHLNLSGCWNLTDAGLVHLTPLVGLQHLDLSYCENLTDAGLAHLTPLTALQ 322
Query: 184 SLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQ-L 240
L +S C +TD+G+A+L L L L+L C +T A L L+ L +L +L L C+ L
Sbjct: 323 HLGLSCCENLTDAGLAHLALLTTLQHLDLSCCYNLTDASLSHLTPLTALQHLYLIGCENL 382
Query: 241 SDDGCEKFSKIGSLKVLNLG--FNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT 297
+D G + + +L+ L+L FN +TD L HL LT L+ LNL C + D GL +LT
Sbjct: 383 TDAGLAHLTPLTALQHLDLSCCFN-LTDAGLSHLTPLTGLQHLNLSRCYKLTDAGLAHLT 441
Query: 298 GLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
L L+ L LS+ + +GL HL+ LT L+ ++L + +NL
Sbjct: 442 TLVALQHLNLSECRHLTDAGLAHLTPLTALQHLDLKY------------------CINL- 482
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEI 403
TD GLA LT LT L HLDL R+TD G + +LEI
Sbjct: 483 ----TDAGLAHLTPLTALQHLDLSRCRRLTDDGLDRFKTLATSLNLEI 526
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 167/319 (52%), Gaps = 28/319 (8%)
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQ 204
L+ LK +E L K C +TD+ + L L L+ L +S C +TD+G+AYLK L
Sbjct: 210 AHLLALKDCKNIEVLYFKKCRGVTDAGLAHLVPLKGLQHLDLSYCENLTDAGLAYLKPLT 269
Query: 205 KLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGFN 262
L LNL GC +T A L L+ L L +L+L+ C+ L+D G + + +L+ L L
Sbjct: 270 ALQHLNLSGCWNLTDAGLVHLTPLVGLQHLDLSYCENLTDAGLAHLTPLTALQHLGLSCC 329
Query: 263 E-ITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQ-VGSSGLRH 319
E +TD L HL LT L+ L+L C + D L +LT L L+ L L + + +GL H
Sbjct: 330 ENLTDAGLAHLALLTTLQHLDLSCCYNLTDASLSHLTPLTALQHLYLIGCENLTDAGLAH 389
Query: 320 LSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLTGLTHL 377
L+ LT L+ ++LS ++D L L L+ L+ LNL ++TD GLA LT+L L HL
Sbjct: 390 LTPLTALQHLDLSCCFNLTDAGLSHLTPLTGLQHLNLSRCYKLTDAGLAHLTTLVALQHL 449
Query: 378 DLFGAR-ITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNS-RITSAGLRHLK 435
+L R +TD+G A+L LT L L++ +T AGL HL
Sbjct: 450 NLSECRHLTDAGLAHL------------------TPLTALQHLDLKYCINLTDAGLAHLT 491
Query: 436 PLKNLRSLTLESCKVTAND 454
PL L+ L L C+ +D
Sbjct: 492 PLTALQHLDLSRCRRLTDD 510
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 157/298 (52%), Gaps = 11/298 (3%)
Query: 20 LTEVSLEAFRDCA-LQDLCLGQYPGVNDKWM-DVIASQGSSLLSVDLSG-SDVTDSGLIH 76
LT L A +DC ++ L + GV D + ++ +G L +DLS ++TD+GL +
Sbjct: 207 LTNAHLLALKDCKNIEVLYFKKCRGVTDAGLAHLVPLKG--LQHLDLSYCENLTDAGLAY 264
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
LK + LQ L+ + C ++D GL HL L L L +T G+ L L L
Sbjct: 265 LKPLTALQHLNLSGCWNLTDAGLVHLTPLVGLQHLDLSYCENLTDAGLAHLTPLTALQHL 324
Query: 137 DLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ-ISCSKVTD 194
L C + GL +L L L+ L++ C +TD+ + L+ LT L+ L I C +TD
Sbjct: 325 GLSCCENLTDAGLAHLALLTTLQHLDLSCCYNLTDASLSHLTPLTALQHLYLIGCENLTD 384
Query: 195 SGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIG 252
+G+A+L L L L+L C +T A L L+ L L +LNL+RC +L+D G + +
Sbjct: 385 AGLAHLTPLTALQHLDLSCCFNLTDAGLSHLTPLTGLQHLNLSRCYKLTDAGLAHLTTLV 444
Query: 253 SLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELS 308
+L+ LNL +TD L HL LT L+ L+L C + D GL +LT L L+ L+LS
Sbjct: 445 ALQHLNLSECRHLTDAGLAHLTPLTALQHLDLKYCINLTDAGLAHLTPLTALQHLDLS 502
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 134/244 (54%), Gaps = 7/244 (2%)
Query: 57 SSLLSVDLSGS-DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
++L ++LSG ++TD+GL+HL LQ LD ++C ++D GL HL L+ L L
Sbjct: 269 TALQHLNLSGCWNLTDAGLVHLTPLVGLQHLDLSYCENLTDAGLAHLTPLTALQHLGLSC 328
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
+T G+ A L L LDL C + L +L L L+ L + C +TD+ +
Sbjct: 329 CENLTDAGLAHLALLTTLQHLDLSCCYNLTDASLSHLTPLTALQHLYLIGCENLTDAGLA 388
Query: 175 PLSGLTNLKSLQISCS-KVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFY 232
L+ LT L+ L +SC +TD+G+++L L L LNL C +T A L L+ L +L +
Sbjct: 389 HLTPLTALQHLDLSCCFNLTDAGLSHLTPLTGLQHLNLSRCYKLTDAGLAHLTTLVALQH 448
Query: 233 LNLNRC-QLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIG 289
LNL+ C L+D G + + +L+ L+L + +TD L HL LT L+ L+L C +
Sbjct: 449 LNLSECRHLTDAGLAHLTPLTALQHLDLKYCINLTDAGLAHLTPLTALQHLDLSRCRRLT 508
Query: 290 DEGL 293
D+GL
Sbjct: 509 DDGL 512
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD+GL HL + LQ LD +CI ++D GL HL L+ L L R +T G+ F
Sbjct: 457 LTDAGLAHLTPLTALQHLDLKYCINLTDAGLAHLTPLTALQHLDLSRCRRLTDDGLDRFK 516
Query: 129 GLINLVKLDLER 140
L + L++ R
Sbjct: 517 TLATSLNLEIVR 528
>gi|306012373|gb|ADM75240.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012405|gb|ADM75256.1| leucine rich repeat-like protein, partial [Picea sitchensis]
Length = 137
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/135 (52%), Positives = 89/135 (65%), Gaps = 31/135 (22%)
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG-------------- 412
ALTSLTGLTHLDLFGARITD G + LR FK L+SLE+CGG +TDAG
Sbjct: 1 ALTSLTGLTHLDLFGARITDYGTSCLRYFKKLQSLELCGGSITDAGVKNIKDLTSMMSLN 60
Query: 413 -----------------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 455
+T LVSLN+SN+R+T+AGL+HL+PLKNL SL+L++CKVT +I
Sbjct: 61 LSQNSHLTDGALEFISGMTALVSLNISNTRVTNAGLQHLRPLKNLTSLSLQACKVTWPEI 120
Query: 456 KRLQSRDLPNLVSFR 470
++LQ+ LPNL R
Sbjct: 121 RKLQATALPNLAGVR 135
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L+ LT L L + +++TD G + L+ +KL L L G +T A + ++ L S+ LNL
Sbjct: 2 LTSLTGLTHLDLFGARITDYGTSCLRYFKKLQSLELCGGSITDAGVKNIKDLTSMMSLNL 61
Query: 236 NR-CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
++ L+D E S + +L LN+ +T+ L HL+ L NL SL+L +C + +
Sbjct: 62 SQNSHLTDGALEFISGMTALVSLNISNTRVTNAGLQHLRPLKNLTSLSLQACKVTWPEIR 121
Query: 295 NL--TGLCNLKCLEL 307
L T L NL + L
Sbjct: 122 KLQATALPNLAGVRL 136
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
L L GL++L R IT G L L+L + G+ N+K L +
Sbjct: 1 ALTSLTGLTHLDLFGAR----ITDYGTSCLRYFKKLQSLELCGGSITDAGVKNIKDLTSM 56
Query: 158 ESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
SLN+ + +TD ++ +SG+T L SL IS ++VT++G+ +L+ L+ LT L+L+ C VT
Sbjct: 57 MSLNLSQNSHLTDGALEFISGMTALVSLNISNTRVTNAGLQHLRPLKNLTSLSLQACKVT 116
Query: 218 AACLDSLSA 226
+ L A
Sbjct: 117 WPEIRKLQA 125
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
+L++L L +L+L +++D G L+ L L ITD + ++K LT++ SLN
Sbjct: 1 ALTSLTGLTHLDLFGARITDYGTSCLRYFKKLQSLELCGGSITDAGVKNIKDLTSMMSLN 60
Query: 283 L-DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 341
L + + D L ++G+ L L +S+T+V ++GL+HL L NL S++L ++ +
Sbjct: 61 LSQNSHLTDGALEFISGMTALVSLNISNTRVTNAGLQHLRPLKNLTSLSLQACKVTWPEI 120
Query: 342 RKL--AGLSSLKSLNLD 356
RKL L +L + LD
Sbjct: 121 RKLQATALPNLAGVRLD 137
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
L LT L L+L I D G L L+ LEL + +G++++ LT++ S+NL
Sbjct: 2 LTSLTGLTHLDLFGARITDYGTSCLRYFKKLQSLELCGGSITDAGVKNIKDLTSMMSLNL 61
Query: 332 SF-TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
S + ++DG+L ++G+++L SLN+ ++T+ GL L L LT L L ++T
Sbjct: 62 SQNSHLTDGALEFISGMTALVSLNISNTRVTNAGLQHLRPLKNLTSLSLQACKVT 116
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 77/134 (57%), Gaps = 6/134 (4%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC-IQISDGGLEHLRGLSNLTSLSFRR 115
+ L +DL G+ +TD G L+ LQSL+ C I+D G+++++ L+++ SL+ +
Sbjct: 6 TGLTHLDLFGARITDYGTSCLRYFKKLQSLE--LCGGSITDAGVKNIKDLTSMMSLNLSQ 63
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
N+ +T ++ +G+ LV L++ + GL +L+ L L SL+++ C +T +++
Sbjct: 64 NSHLTDGALEFISGMTALVSLNISNTRVTNAGLQHLRPLKNLTSLSLQACK-VTWPEIRK 122
Query: 176 L--SGLTNLKSLQI 187
L + L NL +++
Sbjct: 123 LQATALPNLAGVRL 136
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 126 AFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCN-CITDSDMKPLSGLTNLKS 184
A L L LDL G L+ KL+SL + C ITD+ +K + LT++ S
Sbjct: 1 ALTSLTGLTHLDLFGARITDYGTSCLRYFKKLQSLEL--CGGSITDAGVKNIKDLTSMMS 58
Query: 185 LQISC-SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
L +S S +TD + ++ G+ L LN+ VT A L L L +L L+L C+++
Sbjct: 59 LNLSQNSHLTDGALEFISGMTALVSLNISNTRVTNAGLQHLRPLKNLTSLSLQACKVTWP 118
Query: 244 GCEKF 248
K
Sbjct: 119 EIRKL 123
>gi|296124076|ref|YP_003631854.1| ribonuclease inhibitor [Planctomyces limnophilus DSM 3776]
gi|296016416|gb|ADG69655.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Planctomyces
limnophilus DSM 3776]
Length = 474
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 159/319 (49%), Gaps = 26/319 (8%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
+I+D G+ L+ L+NL L N +T G + A NL L L R + L +L
Sbjct: 140 KITDKGVLLLKPLTNLVVLGLE-NTQLTDTGAEVLASFPNLEVLYLRRTNILDPALAHLS 198
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
L KL +L++++ N +TD MK L+GL+ L+ L++ ++VTD+ + + L L LN+
Sbjct: 199 KLAKLRALDLRFTN-VTDEGMKSLAGLSQLRDLRLQATRVTDASLPLIAKLPNLQKLNVW 257
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
G +D G + + +L++L L +T E L+ L
Sbjct: 258 GE------------------------NFTDAGLSQLADTKTLRILELDDTRLTSEGLIKL 293
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
GLTNLE L++ I ++GL + + ++ L L DT GL +SGL NL ++L+
Sbjct: 294 GGLTNLEELHVRRTRIKNDGLAVVKNMPKMRRLLLRDTLCTDPGLEAVSGLKNLVELDLT 353
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
D ++ LAGL+SL+ L+L A +D G+ ++ L L L+L RITD+ A +
Sbjct: 354 EGIFGDDGVKNLAGLTSLEDLSLWATTTSDAGIESIRDLKKLKALNLEQTRITDAAAKTI 413
Query: 393 RNFKNLRSLEICGGGLTDA 411
F L L + +TDA
Sbjct: 414 AGFGELTELNLSQTEVTDA 432
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 142/314 (45%), Gaps = 30/314 (9%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
I D D+ ++ LT+L L++ K+TD G+ LK L L +L LE +T + L++
Sbjct: 117 IGDDDLALVAKLTHLTELRLEGPKITDKGVLLLKPLTNLVVLGLENTQLTDTGAEVLASF 176
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT----------- 276
+L L L R + D SK+ L+ L+L F +TDE + L GL+
Sbjct: 177 PNLEVLYLRRTNILDPALAHLSKLAKLRALDLRFTNVTDEGMKSLAGLSQLRDLRLQATR 236
Query: 277 -------------NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL 323
NL+ LN+ D GL L L+ LEL DT++ S GL L GL
Sbjct: 237 VTDASLPLIAKLPNLQKLNVWGENFTDAGLSQLADTKTLRILELDDTRLTSEGLIKLGGL 296
Query: 324 TNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGAR 383
TNLE +++ T I + L + + ++ L L TD GL A++ L L LDL
Sbjct: 297 TNLEELHVRRTRIKNDGLAVVKNMPKMRRLLLRDTLCTDPGLEAVSGLKNLVELDLTEGI 356
Query: 384 ITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPL 437
D G L +L L + +DAG L L +LN+ +RIT A + +
Sbjct: 357 FGDDGVKNLAGLTSLEDLSLWATTTSDAGIESIRDLKKLKALNLEQTRITDAAAKTIAGF 416
Query: 438 KNLRSLTLESCKVT 451
L L L +VT
Sbjct: 417 GELTELNLSQTEVT 430
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 115/227 (50%), Gaps = 9/227 (3%)
Query: 20 LTEVSLEAFRDCA----LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLI 75
T V+ E + A L+DL L Q V D + +IA + +L +++ G + TD+GL
Sbjct: 210 FTNVTDEGMKSLAGLSQLRDLRL-QATRVTDASLPLIA-KLPNLQKLNVWGENFTDAGLS 267
Query: 76 HLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
L D L+ L+ + +++ GL L GL+NL L RR I G+ + + +
Sbjct: 268 QLADTKTLRILELDDT-RLTSEGLIKLGGLTNLEELHVRRTR-IKNDGLAVVKNMPKMRR 325
Query: 136 LDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDS 195
L L GL + GL L L++ D +K L+GLT+L+ L + + +D+
Sbjct: 326 LLLRDTLCTDPGLEAVSGLKNLVELDLTE-GIFGDDGVKNLAGLTSLEDLSLWATTTSDA 384
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
GI ++ L+KL LNLE +T A +++ G L LNL++ +++D
Sbjct: 385 GIESIRDLKKLKALNLEQTRITDAAAKTIAGFGELTELNLSQTEVTD 431
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 25/236 (10%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ + L ++DL ++VTD G+ L S L+ L +++D L + L NL L+
Sbjct: 198 SKLAKLRALDLRFTNVTDEGMKSLAGLSQLRDLRLQ-ATRVTDASLPLIAKLPNLQKLNV 256
Query: 114 RRNN-----------------------AITAQGMKAFAGLINLVKLDLERCTRIHGGLVN 150
N +T++G+ GL NL +L + R + GL
Sbjct: 257 WGENFTDAGLSQLADTKTLRILELDDTRLTSEGLIKLGGLTNLEELHVRRTRIKNDGLAV 316
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
+K + K+ L ++ C TD ++ +SGL NL L ++ D G+ L GL L L+
Sbjct: 317 VKNMPKMRRLLLRDTLC-TDPGLEAVSGLKNLVELDLTEGIFGDDGVKNLAGLTSLEDLS 375
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
L + A ++S+ L L LNL + +++D + + G L LNL E+TD
Sbjct: 376 LWATTTSDAGIESIRDLKKLKALNLEQTRITDAAAKTIAGFGELTELNLSQTEVTD 431
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Query: 308 SDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAA 367
++T +G L ++ LT+L + L I+D + L L++L L L+ Q+TDTG
Sbjct: 113 AETSIGDDDLALVAKLTHLTELRLEGPKITDKGVLLLKPLTNLVVLGLENTQLTDTGAEV 172
Query: 368 LTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNV 421
L S L L L I D A+L LR+L++ +TD AGL+ L L +
Sbjct: 173 LASFPNLEVLYLRRTNILDPALAHLSKLAKLRALDLRFTNVTDEGMKSLAGLSQLRDLRL 232
Query: 422 SNSRITSAGLRHLKPLKNLRSL 443
+R+T A L + L NL+ L
Sbjct: 233 QATRVTDASLPLIAKLPNLQKL 254
>gi|406830023|ref|ZP_11089617.1| hypothetical protein SpalD1_00247 [Schlesneria paludicola DSM
18645]
Length = 374
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/343 (34%), Positives = 180/343 (52%), Gaps = 35/343 (10%)
Query: 133 LVKLDLERCTRIHGGLVN-LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK 191
++ ++L++ R G V+ LK K+ SLN+ ITDS +K + T+L L ++ +K
Sbjct: 52 VIYVNLQQSERFGDGYVHALKPFTKMTSLNLNSTK-ITDSGLKGIRNFTSLTMLTLAFTK 110
Query: 192 VTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
+TD G+ LK L+ LT L+L GC +T L+ + L SL L+L+ Q +D
Sbjct: 111 ITDVGLVELKDLKNLTRLDLGGCTAITDVGLNEIKELTSLASLHLSYTQFTD-------- 162
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
+G E+ D LK L+NLE L I D+GL L L +L L L T
Sbjct: 163 --------VGLKELAD-----LKCLSNLE---LRGTQITDDGLKELGTLTSLTRLTLMQT 206
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
++ GLR L GL NL+ ++L T I+D L+++ L + SL L +ITD G+ ++
Sbjct: 207 KISDLGLRELKGLRNLQILDLGLTEITDEGLKEIIDLKQIHSLYLFGDEITDEGMQSIGE 266
Query: 371 LTGLTHLDLFGARITDSGAAYLRN-FKNLRSLEICGGGLTDAGL------TGLVSLNVSN 423
L LT LDL IT+ G + + + G +TD GL T L ++N+
Sbjct: 267 LNNLTELDLIQTEITNEGLKEISGLKNLKKLHLLNDGKITDVGLKEIGTMTQLTNINLGR 326
Query: 424 SRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
+ IT+AGL+ L+ LKNL+SL + +VT+ + LQ ++LP L
Sbjct: 327 TGITNAGLKELRNLKNLQSLDVSETEVTSEGVVALQ-KELPKL 368
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 181/350 (51%), Gaps = 30/350 (8%)
Query: 56 GSSLLSVDLSGSDVTDSGLIH-LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
G ++ V+L S+ G +H LK + + SL+ N +I+D GL+ +R ++LT L+
Sbjct: 49 GRPVIYVNLQQSERFGDGYVHALKPFTKMTSLNLN-STKITDSGLKGIRNFTSLTMLTL- 106
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
AF + ++ GLV LK L L L++ C ITD +
Sbjct: 107 -----------AFTKITDV-------------GLVELKDLKNLTRLDLGGCTAITDVGLN 142
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
+ LT+L SL +S ++ TD G+ L L+ L+ L L G +T L L L SL L
Sbjct: 143 EIKELTSLASLHLSYTQFTDVGLKELADLKCLSNLELRGTQITDDGLKELGTLTSLTRLT 202
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
L + ++SD G + + +L++L+LG EITDE L + L + SL L I DEG+
Sbjct: 203 LMQTKISDLGLRELKGLRNLQILDLGLTEITDEGLKEIIDLKQIHSLYLFGDEITDEGMQ 262
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG-ISDGSLRKLAGLSSLKSL 353
++ L NL L+L T++ + GL+ +SGL NL+ ++L G I+D L+++ ++ L ++
Sbjct: 263 SIGELNNLTELDLIQTEITNEGLKEISGLKNLKKLHLLNDGKITDVGLKEIGTMTQLTNI 322
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
NL IT+ GL L +L L LD+ +T G L+ K L L+I
Sbjct: 323 NLGRTGITNAGLKELRNLKNLQSLDVSETEVTSEGVVALQ--KELPKLDI 370
>gi|306012335|gb|ADM75221.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012337|gb|ADM75222.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012341|gb|ADM75224.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012343|gb|ADM75225.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012345|gb|ADM75226.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012347|gb|ADM75227.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012349|gb|ADM75228.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012353|gb|ADM75230.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012355|gb|ADM75231.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012357|gb|ADM75232.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012361|gb|ADM75234.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012363|gb|ADM75235.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012365|gb|ADM75236.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012367|gb|ADM75237.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012369|gb|ADM75238.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012375|gb|ADM75241.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012377|gb|ADM75242.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012379|gb|ADM75243.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012383|gb|ADM75245.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012385|gb|ADM75246.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012387|gb|ADM75247.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012389|gb|ADM75248.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012393|gb|ADM75250.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012399|gb|ADM75253.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012407|gb|ADM75257.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012409|gb|ADM75258.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012411|gb|ADM75259.1| leucine rich repeat-like protein, partial [Picea sitchensis]
gi|306012413|gb|ADM75260.1| leucine rich repeat-like protein, partial [Picea sitchensis]
Length = 137
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 89/135 (65%), Gaps = 31/135 (22%)
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG-------------- 412
ALTSLTGLTHLDLFGARITD G + LR FK L+SLE+CGG +TDAG
Sbjct: 1 ALTSLTGLTHLDLFGARITDYGTSCLRYFKKLQSLELCGGSITDAGVKNIKDLTSMMSLN 60
Query: 413 -----------------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 455
+T L+SLN+SN+R+T+AGL+HL+PLKNL SL+L++CKVT +I
Sbjct: 61 LSQNSHLTDGALEFISGMTALISLNISNTRVTNAGLQHLRPLKNLTSLSLQACKVTWPEI 120
Query: 456 KRLQSRDLPNLVSFR 470
++LQ+ LPNL R
Sbjct: 121 RKLQATALPNLAGVR 135
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L+ LT L L + +++TD G + L+ +KL L L G +T A + ++ L S+ LNL
Sbjct: 2 LTSLTGLTHLDLFGARITDYGTSCLRYFKKLQSLELCGGSITDAGVKNIKDLTSMMSLNL 61
Query: 236 NR-CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
++ L+D E S + +L LN+ +T+ L HL+ L NL SL+L +C + +
Sbjct: 62 SQNSHLTDGALEFISGMTALISLNISNTRVTNAGLQHLRPLKNLTSLSLQACKVTWPEIR 121
Query: 295 NL--TGLCNLKCLEL 307
L T L NL + L
Sbjct: 122 KLQATALPNLAGVRL 136
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
L L GL++L R IT G L L+L + G+ N+K L +
Sbjct: 1 ALTSLTGLTHLDLFGAR----ITDYGTSCLRYFKKLQSLELCGGSITDAGVKNIKDLTSM 56
Query: 158 ESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
SLN+ + +TD ++ +SG+T L SL IS ++VT++G+ +L+ L+ LT L+L+ C VT
Sbjct: 57 MSLNLSQNSHLTDGALEFISGMTALISLNISNTRVTNAGLQHLRPLKNLTSLSLQACKVT 116
Query: 218 AACLDSLSA 226
+ L A
Sbjct: 117 WPEIRKLQA 125
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
+L++L L +L+L +++D G L+ L L ITD + ++K LT++ SLN
Sbjct: 1 ALTSLTGLTHLDLFGARITDYGTSCLRYFKKLQSLELCGGSITDAGVKNIKDLTSMMSLN 60
Query: 283 L-DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 341
L + + D L ++G+ L L +S+T+V ++GL+HL L NL S++L ++ +
Sbjct: 61 LSQNSHLTDGALEFISGMTALISLNISNTRVTNAGLQHLRPLKNLTSLSLQACKVTWPEI 120
Query: 342 RKL--AGLSSLKSLNLD 356
RKL L +L + LD
Sbjct: 121 RKLQATALPNLAGVRLD 137
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
L LT L L+L I D G L L+ LEL + +G++++ LT++ S+NL
Sbjct: 2 LTSLTGLTHLDLFGARITDYGTSCLRYFKKLQSLELCGGSITDAGVKNIKDLTSMMSLNL 61
Query: 332 SF-TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
S + ++DG+L ++G+++L SLN+ ++T+ GL L L LT L L ++T
Sbjct: 62 SQNSHLTDGALEFISGMTALISLNISNTRVTNAGLQHLRPLKNLTSLSLQACKVT 116
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 77/134 (57%), Gaps = 6/134 (4%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC-IQISDGGLEHLRGLSNLTSLSFRR 115
+ L +DL G+ +TD G L+ LQSL+ C I+D G+++++ L+++ SL+ +
Sbjct: 6 TGLTHLDLFGARITDYGTSCLRYFKKLQSLE--LCGGSITDAGVKNIKDLTSMMSLNLSQ 63
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
N+ +T ++ +G+ L+ L++ + GL +L+ L L SL+++ C +T +++
Sbjct: 64 NSHLTDGALEFISGMTALISLNISNTRVTNAGLQHLRPLKNLTSLSLQACK-VTWPEIRK 122
Query: 176 L--SGLTNLKSLQI 187
L + L NL +++
Sbjct: 123 LQATALPNLAGVRL 136
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 126 AFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCN-CITDSDMKPLSGLTNLKS 184
A L L LDL G L+ KL+SL + C ITD+ +K + LT++ S
Sbjct: 1 ALTSLTGLTHLDLFGARITDYGTSCLRYFKKLQSLEL--CGGSITDAGVKNIKDLTSMMS 58
Query: 185 LQISC-SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
L +S S +TD + ++ G+ L LN+ VT A L L L +L L+L C+++
Sbjct: 59 LNLSQNSHLTDGALEFISGMTALISLNISNTRVTNAGLQHLRPLKNLTSLSLQACKVTWP 118
Query: 244 GCEKF 248
K
Sbjct: 119 EIRKL 123
>gi|290979790|ref|XP_002672616.1| predicted protein [Naegleria gruberi]
gi|284086194|gb|EFC39872.1| predicted protein [Naegleria gruberi]
Length = 559
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 193/393 (49%), Gaps = 15/393 (3%)
Query: 54 SQGSSLLSVDLSGSDVTDSG---LIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTS 110
S+ L S+++SG+ + D G + +K + L D C++ G + + + LTS
Sbjct: 168 SEMKQLTSLNISGNRIGDEGAKLISEMKQLTLLNIADNRICVE----GAKSISEMKQLTS 223
Query: 111 LSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITD 170
LS +N I G K + + L L++ G + + +L SL+I N I
Sbjct: 224 LSIS-DNEIGVVGAKLISEMNQLTLLNISNNEIGDEGAKFISEMKQLISLDIS-NNLIDI 281
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
K +S + L SL+I +++ D G+ ++ +++LT L++ G + S+S + L
Sbjct: 282 EGAKSISEMKQLTSLEIYYNEIGDEGVKFISKMEQLTSLDISGNQIGVGGAKSISEMKQL 341
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
+L + ++ D+G S++ L LN+ +N+I DE + + + L SL++ IG
Sbjct: 342 TFLQIFSNRIGDEGANSISEMKQLTSLNIYYNQIGDEGVKFISEMEQLTSLDIGGNQIGV 401
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
G +++ + L L++ ++G G++ +S + L S+N+S I D + ++ + L
Sbjct: 402 GGAKSISEMKQLTFLQIFSNRIGDEGVKFISEMKQLTSLNISGNRIGDEGAKSISEMKQL 461
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
L + + +I D G+ ++ + LT L ++ RI D G + K L SL I G + D
Sbjct: 462 TLLYISSNEIGDEGVKFISEMKQLTLLQIYSNRIGDEGVKSISEMKQLTSLNISGNRIGD 521
Query: 411 AG------LTGLVSLNVSNSRITSAGLRHLKPL 437
G + L SLN+SN+RI G++ L L
Sbjct: 522 EGVKSISEMKQLTSLNISNNRIGDEGVKLLTSL 554
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 147/292 (50%), Gaps = 6/292 (2%)
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
CN I +S + L SL IS +++ D G + +++LTLLN+ + S+
Sbjct: 156 CNEIGVEGATSISEMKQLTSLNISGNRIGDEGAKLISEMKQLTLLNIADNRICVEGAKSI 215
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
S + L L+++ ++ G + S++ L +LN+ NEI DE + + L SL++
Sbjct: 216 SEMKQLTSLSISDNEIGVVGAKLISEMNQLTLLNISNNEIGDEGAKFISEMKQLISLDIS 275
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
+ I EG +++ + L LE+ ++G G++ +S + L S+++S I G + +
Sbjct: 276 NNLIDIEGAKSISEMKQLTSLEIYYNEIGDEGVKFISKMEQLTSLDISGNQIGVGGAKSI 335
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI- 403
+ + L L + + +I D G +++ + LT L+++ +I D G ++ + L SL+I
Sbjct: 336 SEMKQLTFLQIFSNRIGDEGANSISEMKQLTSLNIYYNQIGDEGVKFISEMEQLTSLDIG 395
Query: 404 -----CGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
GG + + + L L + ++RI G++ + +K L SL + ++
Sbjct: 396 GNQIGVGGAKSISEMKQLTFLQIFSNRIGDEGVKFISEMKQLTSLNISGNRI 447
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 155/326 (47%), Gaps = 31/326 (9%)
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC 220
N+K+ D + K +S + L SL I+ +++ D G+ ++ +++LTLL++ +
Sbjct: 105 NVKFSVYSLD-NAKFISEMKQLTSLGIAENRIGDEGVKFISEMKQLTLLDICCNEIGVEG 163
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE---CLVHLKGLTN 277
S+S + L LN++ ++ D+G + S++ L +LN+ N I E + +K LT+
Sbjct: 164 ATSISEMKQLTSLNISGNRIGDEGAKLISEMKQLTLLNIADNRICVEGAKSISEMKQLTS 223
Query: 278 LES---------------------LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
L LN+ + IGDEG ++ + L L++S+ + G
Sbjct: 224 LSISDNEIGVVGAKLISEMNQLTLLNISNNEIGDEGAKFISEMKQLISLDISNNLIDIEG 283
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
+ +S + L S+ + + I D ++ ++ + L SL++ QI G +++ + LT
Sbjct: 284 AKSISEMKQLTSLEIYYNEIGDEGVKFISKMEQLTSLDISGNQIGVGGAKSISEMKQLTF 343
Query: 377 LDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAG 430
L +F RI D GA + K L SL I + D G + L SL++ ++I G
Sbjct: 344 LQIFSNRIGDEGANSISEMKQLTSLNIYYNQIGDEGVKFISEMEQLTSLDIGGNQIGVGG 403
Query: 431 LRHLKPLKNLRSLTLESCKVTANDIK 456
+ + +K L L + S ++ +K
Sbjct: 404 AKSISEMKQLTFLQIFSNRIGDEGVK 429
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 117/245 (47%), Gaps = 9/245 (3%)
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
+S + L L + ++ D+G + S++ L +L++ NEI E + + L SLN+
Sbjct: 119 ISEMKQLTSLGIAENRIGDEGVKFISEMKQLTLLDICCNEIGVEGATSISEMKQLTSLNI 178
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
IGDEG ++ + L L ++D ++ G + +S + L S+++S I +
Sbjct: 179 SGNRIGDEGAKLISEMKQLTLLNIADNRICVEGAKSISEMKQLTSLSISDNEIGVVGAKL 238
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
++ ++ L LN+ +I D G ++ + L LD+ I GA + K L SLEI
Sbjct: 239 ISEMNQLTLLNISNNEIGDEGAKFISEMKQLISLDISNNLIDIEGAKSISEMKQLTSLEI 298
Query: 404 CGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV---TAND 454
+ D G + L SL++S ++I G + + +K L L + S ++ AN
Sbjct: 299 YYNEIGDEGVKFISKMEQLTSLDISGNQIGVGGAKSISEMKQLTFLQIFSNRIGDEGANS 358
Query: 455 IKRLQ 459
I ++
Sbjct: 359 ISEMK 363
>gi|290982526|ref|XP_002673981.1| predicted protein [Naegleria gruberi]
gi|284087568|gb|EFC41237.1| predicted protein [Naegleria gruberi]
Length = 363
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 188/369 (50%), Gaps = 8/369 (2%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIK 163
+ LTSL+ NN I+ +G K + + L L++ RI G G + + +L SLNI
Sbjct: 1 MKQLTSLNVS-NNQISGKGAKYISEMKQLTSLNISN-NRIGGKGAKYISEMKQLTSLNI- 57
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
+ N I+D K +S + L SL IS +++ G ++ +++LT LN+ ++
Sbjct: 58 FNNRISDEGAKYISEMKQLISLDISYNQIGAEGAKFISEMKQLTSLNISYNEISDEGAKY 117
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
+S + L LN++ +S+ G + S++ L LN+ N+I+ + ++ + L SLN+
Sbjct: 118 ISEMKQLTSLNISYNDISE-GAKPISEMKQLTSLNVSNNQISGKGAKYISEMKQLTSLNI 176
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
I +G + + L L++S+ Q+ G + LS + L S+N+S IS +
Sbjct: 177 SDNQISGKGAKYIGEMKQLTSLDISNNQISDEGAKFLSEMKQLISLNVSNNQISGKEAKF 236
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
++ + L SLN+ QI+D ++ + LT LD+F I+D GA Y+ K+L SL+I
Sbjct: 237 MSEMKQLTSLNISNNQISDERAKYISEMKQLTSLDIFNNLISDEGAKYISEMKHLTSLDI 296
Query: 404 CGGGLTD-AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRD 462
++ + + L SLN+S ++I G + + +K L SL + ++ K + +
Sbjct: 297 SYNEISHISEMKQLTSLNISFNQINDEGAKSISEMKQLTSLDMSYNRIGGEGAKYI--SE 354
Query: 463 LPNLVSFRP 471
+ +L S R
Sbjct: 355 MKHLTSLRK 363
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 172/348 (49%), Gaps = 33/348 (9%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L S+++ + ++D G ++ + L SLD ++ QI G + + + LTSL+
Sbjct: 47 SEMKQLTSLNIFNNRISDEGAKYISEMKQLISLDISYN-QIGAEGAKFISEMKQLTSLNI 105
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
N I+ +G K + + +L SLNI + N I++
Sbjct: 106 SY-NEISDEGAKYIS------------------------EMKQLTSLNISY-NDISEG-A 138
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
KP+S + L SL +S ++++ G Y+ +++LT LN+ ++ + + L L
Sbjct: 139 KPISEMKQLTSLNVSNNQISGKGAKYISEMKQLTSLNISDNQISGKGAKYIGEMKQLTSL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+++ Q+SD+G + S++ L LN+ N+I+ + + + L SLN+ + I DE
Sbjct: 199 DISNNQISDEGAKFLSEMKQLISLNVSNNQISGKEAKFMSEMKQLTSLNISNNQISDERA 258
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
++ + L L++ + + G +++S + +L S+++S+ IS ++ + L SL
Sbjct: 259 KYISEMKQLTSLDIFNNLISDEGAKYISEMKHLTSLDISYNEISH-----ISEMKQLTSL 313
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
N+ QI D G +++ + LT LD+ RI GA Y+ K+L SL
Sbjct: 314 NISFNQINDEGAKSISEMKQLTSLDMSYNRIGGEGAKYISEMKHLTSL 361
>gi|168698162|ref|ZP_02730439.1| hypothetical protein GobsU_01482 [Gemmata obscuriglobus UQM 2246]
Length = 295
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/279 (37%), Positives = 148/279 (53%), Gaps = 7/279 (2%)
Query: 164 WCNC-ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
W + +TD+ +K L+GLTNL L + + VTD G+ L L+ L L+L VT A L
Sbjct: 7 WRDLQVTDAGLKELAGLTNLTQLILLGTAVTDVGLEELAPLKNLNTLDLGKTKVTDAGLK 66
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
+L+ L L L L ++D G ++ SLK L L ++TD L L NL L
Sbjct: 67 ALAPLTGLTRLALGDTGVTDAGLKELVPFKSLKTLYLFSTKVTDAGLKELGRFKNLTVLG 126
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
L G+ D GL L NL L LS T V +GL+ L+ L NL + L TG++D L+
Sbjct: 127 LGGTGVTDAGLRELGRFKNLTALGLSGTGVTDAGLKELAPLKNLTELGLGGTGVADVGLK 186
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
+LA +L L+L + ++TD GL L L LT LDL ++TD G L K L +L
Sbjct: 187 ELAPFKNLAKLDLYSTKVTDAGLKELGLLKNLTLLDLGRTQVTDDGLRELTGLKALTTLI 246
Query: 403 ICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLK 435
+ G G+TD AGLT L LN+ +++T AG + LK
Sbjct: 247 LIGTGVTDAGLKELAGLTNLTRLNLYRTKVTDAGWKELK 285
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/279 (37%), Positives = 149/279 (53%), Gaps = 2/279 (0%)
Query: 92 IQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL 151
+Q++D GL+ L GL+NLT L A+T G++ A L NL LDL + GL L
Sbjct: 10 LQVTDAGLKELAGLTNLTQLIL-LGTAVTDVGLEELAPLKNLNTLDLGKTKVTDAGLKAL 68
Query: 152 KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
L L L + +TD+ +K L +LK+L + +KVTD+G+ L + LT+L L
Sbjct: 69 APLTGLTRLALG-DTGVTDAGLKELVPFKSLKTLYLFSTKVTDAGLKELGRFKNLTVLGL 127
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH 271
G VT A L L +L L L+ ++D G ++ + + +L L LG + D L
Sbjct: 128 GGTGVTDAGLRELGRFKNLTALGLSGTGVTDAGLKELAPLKNLTELGLGGTGVADVGLKE 187
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
L NL L+L S + D GL L L NL L+L TQV GLR L+GL L ++ L
Sbjct: 188 LAPFKNLAKLDLYSTKVTDAGLKELGLLKNLTLLDLGRTQVTDDGLRELTGLKALTTLIL 247
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
TG++D L++LAGL++L LNL ++TD G L S
Sbjct: 248 IGTGVTDAGLKELAGLTNLTRLNLYRTKVTDAGWKELKS 286
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 141/276 (51%), Gaps = 6/276 (2%)
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
+VTD+G+ L GL LT L L G VT L+ L+ L +L L+L + +++D G + +
Sbjct: 11 QVTDAGLKELAGLTNLTQLILLGTAVTDVGLEELAPLKNLNTLDLGKTKVTDAGLKALAP 70
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
+ L L LG +TD L L +L++L L S + D GL L NL L L T
Sbjct: 71 LTGLTRLALGDTGVTDAGLKELVPFKSLKTLYLFSTKVTDAGLKELGRFKNLTVLGLGGT 130
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
V +GLR L NL ++ LS TG++D L++LA L +L L L + D GL L
Sbjct: 131 GVTDAGLRELGRFKNLTALGLSGTGVTDAGLKELAPLKNLTELGLGGTGVADVGLKELAP 190
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNS 424
L LDL+ ++TD+G L KNL L++ +TD GL L +L + +
Sbjct: 191 FKNLAKLDLYSTKVTDAGLKELGLLKNLTLLDLGRTQVTDDGLRELTGLKALTTLILIGT 250
Query: 425 RITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
+T AGL+ L L NL L L KVT K L+S
Sbjct: 251 GVTDAGLKELAGLTNLTRLNLYRTKVTDAGWKELKS 286
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 150/319 (47%), Gaps = 39/319 (12%)
Query: 26 EAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQS 85
+ +RD + D L + G+ ++L + L G+ VTD GL L NL +
Sbjct: 5 KPWRDLQVTDAGLKELAGL------------TNLTQLILLGTAVTDVGLEELAPLKNLNT 52
Query: 86 LDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIH 145
LD +++D GL+ L L+ LT L+ + +T G+K
Sbjct: 53 LDLGKT-KVTDAGLKALAPLTGLTRLAL-GDTGVTDAGLKE------------------- 91
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
LV K L L + K +TD+ +K L NL L + + VTD+G+ L +
Sbjct: 92 --LVPFKSLKTLYLFSTK----VTDAGLKELGRFKNLTVLGLGGTGVTDAGLRELGRFKN 145
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
LT L L G VT A L L+ L +L L L ++D G ++ + +L L+L ++T
Sbjct: 146 LTALGLSGTGVTDAGLKELAPLKNLTELGLGGTGVADVGLKELAPFKNLAKLDLYSTKVT 205
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
D L L L NL L+L + D+GL LTGL L L L T V +GL+ L+GLTN
Sbjct: 206 DAGLKELGLLKNLTLLDLGRTQVTDDGLRELTGLKALTTLILIGTGVTDAGLKELAGLTN 265
Query: 326 LESINLSFTGISDGSLRKL 344
L +NL T ++D ++L
Sbjct: 266 LTRLNLYRTKVTDAGWKEL 284
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 92/180 (51%), Gaps = 30/180 (16%)
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
D QV +GL+ L+GLTNL + L T ++D L +LA L +L +L+L ++TD GL AL
Sbjct: 9 DLQVTDAGLKELAGLTNLTQLILLGTAVTDVGLEELAPLKNLNTLDLGKTKVTDAGLKAL 68
Query: 369 TSLTGLTHLD------------------------LFGARITDSGAAYLRNFKNLRSLEIC 404
LTGLT L LF ++TD+G L FKNL L +
Sbjct: 69 APLTGLTRLALGDTGVTDAGLKELVPFKSLKTLYLFSTKVTDAGLKELGRFKNLTVLGLG 128
Query: 405 GGGLTDAGL------TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
G G+TDAGL L +L +S + +T AGL+ L PLKNL L L V +K L
Sbjct: 129 GTGVTDAGLRELGRFKNLTALGLSGTGVTDAGLKELAPLKNLTELGLGGTGVADVGLKEL 188
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 74/145 (51%), Gaps = 3/145 (2%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+L ++ LSG+ VTD+GL L NL L ++D GL+ L NL L +
Sbjct: 144 KNLTALGLSGTGVTDAGLKELAPLKNLTELGLG-GTGVADVGLKELAPFKNLAKLDL-YS 201
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+T G+K L NL LDL R GL L GL L +L I +TD+ +K L
Sbjct: 202 TKVTDAGLKELGLLKNLTLLDLGRTQVTDDGLRELTGLKALTTL-ILIGTGVTDAGLKEL 260
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLK 201
+GLTNL L + +KVTD+G LK
Sbjct: 261 AGLTNLTRLNLYRTKVTDAGWKELK 285
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC----------- 91
GV D + +A +L + L G+ V D GL L NL LD
Sbjct: 155 GVTDAGLKELAPL-KNLTELGLGGTGVADVGLKELAPFKNLAKLDLYSTKVTDAGLKELG 213
Query: 92 ------------IQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE 139
Q++D GL L GL LT+L +T G+K AGL NL +L+L
Sbjct: 214 LLKNLTLLDLGRTQVTDDGLRELTGLKALTTLILI-GTGVTDAGLKELAGLTNLTRLNLY 272
Query: 140 RCTRIHGGLVNLK 152
R G LK
Sbjct: 273 RTKVTDAGWKELK 285
>gi|46447554|ref|YP_008919.1| hypothetical protein pc1920 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401195|emb|CAF24644.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 517
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 158/304 (51%), Gaps = 30/304 (9%)
Query: 83 LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT 142
+++L+F+ ++D L L+ NL L AIT G+ L L LDL +C
Sbjct: 227 IEALNFSENAYLTDAHLLALKVCKNLKVLHLEACQAITDDGLAHLTPLTALQHLDLSQCR 286
Query: 143 RIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYL 200
++ G GL +L L L+ L++ C+ +TD+ + L+ LT L+ L +S C +TD+G+ +L
Sbjct: 287 KLTGIGLAHLTPLTALQHLDLSGCDNLTDAGLAHLAPLTALQHLNLSDCENLTDAGLVHL 346
Query: 201 KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLN 258
L L L+L C + A L L L +L YL+L+ C L+D G + L+ LN
Sbjct: 347 SPLIALQHLDLSYCWRLNYAGLAHLKPLTALQYLDLSHCINLTDAGLAHLKPLMRLQYLN 406
Query: 259 LGFNE-ITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQ-VGSS 315
L + E +TD L HL L L+ LNL C + D GL +LT L L+ L+LS + + +
Sbjct: 407 LRYCENLTDAGLAHLTPLMALQHLNLSECYHLTDAGLTHLTPLTALQHLDLSHCRSLTDA 466
Query: 316 GLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLT 375
GL HL+ LT L+ ++LS+ + +TD GLA LT LTGL
Sbjct: 467 GLAHLTSLTVLQYLDLSY-----------------------CKNLTDAGLARLTPLTGLQ 503
Query: 376 HLDL 379
HLDL
Sbjct: 504 HLDL 507
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 154/289 (53%), Gaps = 19/289 (6%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
K+E+LN +TD+ + L NLK L + +C +TD G+A+L L L L+L C
Sbjct: 226 KIEALNFSENAYLTDAHLLALKVCKNLKVLHLEACQAITDDGLAHLTPLTALQHLDLSQC 285
Query: 215 -PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNE-ITDECLVH 271
+T L L+ L +L +L+L+ C L+D G + + +L+ LNL E +TD LVH
Sbjct: 286 RKLTGIGLAHLTPLTALQHLDLSGCDNLTDAGLAHLAPLTALQHLNLSDCENLTDAGLVH 345
Query: 272 LKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESI 329
L L L+ L+L C + GL +L L L+ L+LS + +GL HL L L+ +
Sbjct: 346 LSPLIALQHLDLSYCWRLNYAGLAHLKPLTALQYLDLSHCINLTDAGLAHLKPLMRLQYL 405
Query: 330 NLSF-TGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGAR-ITD 386
NL + ++D L L L +L+ LNL + +TD GL LT LT L HLDL R +TD
Sbjct: 406 NLRYCENLTDAGLAHLTPLMALQHLNLSECYHLTDAGLTHLTPLTALQHLDLSHCRSLTD 465
Query: 387 SGAAYLRNFKNLRSLEICG-GGLTDAGLTGLVSLNVSNSRITSAGLRHL 434
+G A+L + L+ L++ LTDAGL L L GL+HL
Sbjct: 466 AGLAHLTSLTVLQYLDLSYCKNLTDAGLARLTPL---------TGLQHL 505
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 147/283 (51%), Gaps = 11/283 (3%)
Query: 11 FNELVYSRCLTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SD 68
F+E Y LT+ L A + C L+ L L + D + + + ++L +DLS
Sbjct: 232 FSENAY---LTDAHLLALKVCKNLKVLHLEACQAITDDGLAHL-TPLTALQHLDLSQCRK 287
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+T GL HL + LQ LD + C ++D GL HL L+ L L+ +T G+ +
Sbjct: 288 LTGIGLAHLTPLTALQHLDLSGCDNLTDAGLAHLAPLTALQHLNLSDCENLTDAGLVHLS 347
Query: 129 GLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
LI L LDL C R+ + GL +LK L L+ L++ C +TD+ + L L L+ L +
Sbjct: 348 PLIALQHLDLSYCWRLNYAGLAHLKPLTALQYLDLSHCINLTDAGLAHLKPLMRLQYLNL 407
Query: 188 S-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQ-LSDDG 244
C +TD+G+A+L L L LNL C +T A L L+ L +L +L+L+ C+ L+D G
Sbjct: 408 RYCENLTDAGLAHLTPLMALQHLNLSECYHLTDAGLTHLTPLTALQHLDLSHCRSLTDAG 467
Query: 245 CEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC 286
+ + L+ L+L + +TD L L LT L+ L+L C
Sbjct: 468 LAHLTSLTVLQYLDLSYCKNLTDAGLARLTPLTGLQHLDLSRC 510
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 123/218 (56%), Gaps = 20/218 (9%)
Query: 247 KFSKIGSLKVLNLGFNE---ITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNL 302
+FSK K+ L F+E +TD L+ LK NL+ L+L++C I D+GL +LT L L
Sbjct: 222 RFSK----KIEALNFSENAYLTDAHLLALKVCKNLKVLHLEACQAITDDGLAHLTPLTAL 277
Query: 303 KCLELSD-TQVGSSGLRHLSGLTNLESINLS-FTGISDGSLRKLAGLSSLKSLNL-DARQ 359
+ L+LS ++ GL HL+ LT L+ ++LS ++D L LA L++L+ LNL D
Sbjct: 278 QHLDLSQCRKLTGIGLAHLTPLTALQHLDLSGCDNLTDAGLAHLAPLTALQHLNLSDCEN 337
Query: 360 ITDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICGG-GLTDAGLT--- 414
+TD GL L+ L L HLDL + R+ +G A+L+ L+ L++ LTDAGL
Sbjct: 338 LTDAGLVHLSPLIALQHLDLSYCWRLNYAGLAHLKPLTALQYLDLSHCINLTDAGLAHLK 397
Query: 415 GLVSLNVSNSR----ITSAGLRHLKPLKNLRSLTLESC 448
L+ L N R +T AGL HL PL L+ L L C
Sbjct: 398 PLMRLQYLNLRYCENLTDAGLAHLTPLMALQHLNLSEC 435
>gi|46447626|ref|YP_008991.1| hypothetical protein pc1992 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401267|emb|CAF24716.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 537
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 162/281 (57%), Gaps = 9/281 (3%)
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKL 206
L+ LK L+ LN+K C +TD+ + L+ LT L+ L +S C +TD+G+A L L L
Sbjct: 257 LLALKDCKNLKMLNLKSCKNLTDAGLAHLTPLTALRRLDLSFCRNLTDAGLANLTPLIAL 316
Query: 207 TLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGF-NE 263
L+L C +T A L L+ LG+L YL+L+ C +L+D G + + L+ LNL + +
Sbjct: 317 QHLDLSWCKNLTDAGLAHLTPLGALHYLDLSICGKLTDAGLAHLTPLVDLQHLNLRYCQK 376
Query: 264 ITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQ-VGSSGLRHLS 321
++D L HL+ L L+ L+L C + D GL +L L L+ L L+ + + +GL HL
Sbjct: 377 LSDAGLAHLRSLVTLQHLDLSYCQNLTDAGLAHLARLTALQHLSLNRCKNLTEAGLVHLR 436
Query: 322 GLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL 379
L L+ ++LS+ +++ L L++L+ LNL+ +++TD GLA L+ L L HLDL
Sbjct: 437 PLVTLQHLDLSYCQKLTNDGLGLFKSLTALQYLNLNHCQKLTDAGLAHLSPLGALQHLDL 496
Query: 380 FGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGLVSL 419
+ ITD+G A+L+ L+ L + LTDAGL L L
Sbjct: 497 WCTNITDAGLAHLKPLGALQYLGLSRCTNLTDAGLAHLSPL 537
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 163/288 (56%), Gaps = 11/288 (3%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLT--SLSFRRNNAITAQGMKA 126
+TD+ L+ LKDC NL+ L+ C ++D GL HL L+ L LSF RN +T G+
Sbjct: 252 LTDAYLLALKDCKNLKMLNLKSCKNLTDAGLAHLTPLTALRRLDLSFCRN--LTDAGLAN 309
Query: 127 FAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
LI L LDL C + GL +L L L L++ C +TD+ + L+ L +L+ L
Sbjct: 310 LTPLIALQHLDLSWCKNLTDAGLAHLTPLGALHYLDLSICGKLTDAGLAHLTPLVDLQHL 369
Query: 186 QI-SCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQ-LSD 242
+ C K++D+G+A+L+ L L L+L C +T A L L+ L +L +L+LNRC+ L++
Sbjct: 370 NLRYCQKLSDAGLAHLRSLVTLQHLDLSYCQNLTDAGLAHLARLTALQHLSLNRCKNLTE 429
Query: 243 DGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLC 300
G + +L+ L+L + ++T++ L K LT L+ LNL+ C + D GL +L+ L
Sbjct: 430 AGLVHLRPLVTLQHLDLSYCQKLTNDGLGLFKSLTALQYLNLNHCQKLTDAGLAHLSPLG 489
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGL 347
L+ L+L T + +GL HL L L+ + LS T ++D L L+ L
Sbjct: 490 ALQHLDLWCTNITDAGLAHLKPLGALQYLGLSRCTNLTDAGLAHLSPL 537
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 144/265 (54%), Gaps = 6/265 (2%)
Query: 65 SGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
S ++TD+GL HL + L+ LD +FC ++D GL +L L L L +T G+
Sbjct: 273 SCKNLTDAGLAHLTPLTALRRLDLSFCRNLTDAGLANLTPLIALQHLDLSWCKNLTDAGL 332
Query: 125 KAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
L L LDL C ++ GL +L L+ L+ LN+++C ++D+ + L L L+
Sbjct: 333 AHLTPLGALHYLDLSICGKLTDAGLAHLTPLVDLQHLNLRYCQKLSDAGLAHLRSLVTLQ 392
Query: 184 SLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQ-L 240
L +S C +TD+G+A+L L L L+L C +T A L L L +L +L+L+ CQ L
Sbjct: 393 HLDLSYCQNLTDAGLAHLARLTALQHLSLNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKL 452
Query: 241 SDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
++DG F + +L+ LNL ++TD L HL L L+ L+L I D GL +L L
Sbjct: 453 TNDGLGLFKSLTALQYLNLNHCQKLTDAGLAHLSPLGALQHLDLWCTNITDAGLAHLKPL 512
Query: 300 CNLKCLELSD-TQVGSSGLRHLSGL 323
L+ L LS T + +GL HLS L
Sbjct: 513 GALQYLGLSRCTNLTDAGLAHLSPL 537
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 164/302 (54%), Gaps = 27/302 (8%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
++E LN +TD+ + L NLK L + SC +TD+G+A+L L L L+L C
Sbjct: 240 EIEELNFSDNVYLTDAYLLALKDCKNLKMLNLKSCKNLTDAGLAHLTPLTALRRLDLSFC 299
Query: 215 P-VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGF-NEITDECLVH 271
+T A L +L+ L +L +L+L+ C+ L+D G + +G+L L+L ++TD L H
Sbjct: 300 RNLTDAGLANLTPLIALQHLDLSWCKNLTDAGLAHLTPLGALHYLDLSICGKLTDAGLAH 359
Query: 272 LKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQ-VGSSGLRHLSGLTNLESI 329
L L +L+ LNL C + D GL +L L L+ L+LS Q + +GL HL+ LT L+ +
Sbjct: 360 LTPLVDLQHLNLRYCQKLSDAGLAHLRSLVTLQHLDLSYCQNLTDAGLAHLARLTALQHL 419
Query: 330 NLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL-FGARITD 386
+L+ +++ L L L +L+ L+L +++T+ GL SLT L +L+L ++TD
Sbjct: 420 SLNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKLTNDGLGLFKSLTALQYLNLNHCQKLTD 479
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
+G A+L + L L L++ + IT AGL HLKPL L+ L L
Sbjct: 480 AGLAHL------------------SPLGALQHLDLWCTNITDAGLAHLKPLGALQYLGLS 521
Query: 447 SC 448
C
Sbjct: 522 RC 523
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 126/244 (51%), Gaps = 6/244 (2%)
Query: 13 ELVYSRCLTEVSLEAFRD-CALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLS-GSDVT 70
+L + R LT+ L ALQ L L + D + + G+ L +DLS +T
Sbjct: 295 DLSFCRNLTDAGLANLTPLIALQHLDLSWCKNLTDAGLAHLTPLGA-LHYLDLSICGKLT 353
Query: 71 DSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGL 130
D+GL HL +LQ L+ +C ++SD GL HLR L L L +T G+ A L
Sbjct: 354 DAGLAHLTPLVDLQHLNLRYCQKLSDAGLAHLRSLVTLQHLDLSYCQNLTDAGLAHLARL 413
Query: 131 INLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS- 188
L L L RC + GLV+L+ L+ L+ L++ +C +T+ + LT L+ L ++
Sbjct: 414 TALQHLSLNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKLTNDGLGLFKSLTALQYLNLNH 473
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEK 247
C K+TD+G+A+L L L L+L +T A L L LG+L YL L+RC L+D G
Sbjct: 474 CQKLTDAGLAHLSPLGALQHLDLWCTNITDAGLAHLKPLGALQYLGLSRCTNLTDAGLAH 533
Query: 248 FSKI 251
S +
Sbjct: 534 LSPL 537
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 146/278 (52%), Gaps = 27/278 (9%)
Query: 192 VTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFS 249
+TD+ + LK + L +LNL+ C +T A L L+ L +L L+L+ C+ L+D G +
Sbjct: 252 LTDAYLLALKDCKNLKMLNLKSCKNLTDAGLAHLTPLTALRRLDLSFCRNLTDAGLANLT 311
Query: 250 KIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL 307
+ +L+ L+L + +TD L HL L L L+L CG + D GL +LT L +L+ L L
Sbjct: 312 PLIALQHLDLSWCKNLTDAGLAHLTPLGALHYLDLSICGKLTDAGLAHLTPLVDLQHLNL 371
Query: 308 SDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLD-ARQITDTG 364
Q + +GL HL L L+ ++LS+ ++D L LA L++L+ L+L+ + +T+ G
Sbjct: 372 RYCQKLSDAGLAHLRSLVTLQHLDLSYCQNLTDAGLAHLARLTALQHLSLNRCKNLTEAG 431
Query: 365 LAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN 423
L L L L HLDL + ++T+ G + LT L LN+++
Sbjct: 432 LVHLRPLVTLQHLDLSYCQKLTNDGLGLFK------------------SLTALQYLNLNH 473
Query: 424 -SRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
++T AGL HL PL L+ L L +T + L+
Sbjct: 474 CQKLTDAGLAHLSPLGALQHLDLWCTNITDAGLAHLKP 511
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 129/225 (57%), Gaps = 16/225 (7%)
Query: 246 EKFSKIGSLKVLNLGFNE---ITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCN 301
EK K S ++ L F++ +TD L+ LK NL+ LNL SC + D GL +LT L
Sbjct: 231 EKILKHFSNEIEELNFSDNVYLTDAYLLALKDCKNLKMLNLKSCKNLTDAGLAHLTPLTA 290
Query: 302 LKCLELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-R 358
L+ L+LS + + +GL +L+ L L+ ++LS+ ++D L L L +L L+L
Sbjct: 291 LRRLDLSFCRNLTDAGLANLTPLIALQHLDLSWCKNLTDAGLAHLTPLGALHYLDLSICG 350
Query: 359 QITDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGL 416
++TD GLA LT L L HL+L + +++D+G A+LR+ L+ L++ LTDAGL L
Sbjct: 351 KLTDAGLAHLTPLVDLQHLNLRYCQKLSDAGLAHLRSLVTLQHLDLSYCQNLTDAGLAHL 410
Query: 417 VSL----NVSNSR---ITSAGLRHLKPLKNLRSLTLESCKVTAND 454
L ++S +R +T AGL HL+PL L+ L L C+ ND
Sbjct: 411 ARLTALQHLSLNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKLTND 455
>gi|290970571|ref|XP_002668179.1| predicted protein [Naegleria gruberi]
gi|284081412|gb|EFC35435.1| predicted protein [Naegleria gruberi]
Length = 592
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 211/420 (50%), Gaps = 19/420 (4%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L SVD+SG+ + G + + L SL+ + I I G + + G+ +LTSL N
Sbjct: 135 LTSVDISGNRIGIEGAKSISEMKQLTSLNISNNI-IGVEGAKSISGMKHLTSLDIS-GNR 192
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGG--LVNLKGLMKLESLNIKWCNCITDSDMKPL 176
I +G+K+ + + L+ LD+ T + GG + + +L SL+I + N I K +
Sbjct: 193 IGDEGVKSISEMEQLISLDI--STNVIGGEGAKFISEMKQLTSLDI-FYNRIGGEGAKLI 249
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
S + L SL IS +++ G + +++LT LN+ G + + S+S + L LN++
Sbjct: 250 SEMKQLTSLNISTNEIDVEGSKLISEMKQLTSLNISGNLIGVEGVKSISGMKQLTSLNIS 309
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
+ D+G + S++ L L++ N I DE + + + L S ++ + I DEG ++
Sbjct: 310 GNLIGDEGAKLISEMKQLTSLDIYNNRIGDEGVKSISEMKQLTSFDISNNLIYDEGAKSI 369
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
+G+ L L +S+ ++G G++ +S + L S+N+S I + ++G+ L SL +
Sbjct: 370 SGMKQLTSLTISNNRIGGEGVKFISEIKQLTSLNISKNEIDGEGAKFISGMKQLTSLTIY 429
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG---- 412
I D G+ +++ + LT LD+ RI D G + + L SL+I + G
Sbjct: 430 KNGIGDEGVKSISEMKQLTSLDISNNRIGDEGVKSISEMEQLISLDISTNVIGGEGAKFI 489
Query: 413 --LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA------NDIKRLQSRDLP 464
+ L SL++S + I G++ + +K L SL + ++ +++K+L S D+
Sbjct: 490 SEMKQLTSLDISGNLIYDEGVKSISEMKQLTSLNISGNQIGVEGAKFISEMKQLTSLDIS 549
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 192/380 (50%), Gaps = 9/380 (2%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L+S+D+S + + G + + L SLD F +I G + + + LTSL+
Sbjct: 202 SEMEQLISLDISTNVIGGEGAKFISEMKQLTSLDI-FYNRIGGEGAKLISEMKQLTSLNI 260
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
N I +G K + + L L++ G+ ++ G+ +L SLNI N I D
Sbjct: 261 S-TNEIDVEGSKLISEMKQLTSLNISGNLIGVEGVKSISGMKQLTSLNIS-GNLIGDEGA 318
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K +S + L SL I +++ D G+ + +++LT ++ + S+S + L L
Sbjct: 319 KLISEMKQLTSLDIYNNRIGDEGVKSISEMKQLTSFDISNNLIYDEGAKSISGMKQLTSL 378
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
++ ++ +G + S+I L LN+ NEI E + G+ L SL + GIGDEG+
Sbjct: 379 TISNNRIGGEGVKFISEIKQLTSLNISKNEIDGEGAKFISGMKQLTSLTIYKNGIGDEGV 438
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
+++ + L L++S+ ++G G++ +S + L S+++S I + ++ + L SL
Sbjct: 439 KSISEMKQLTSLDISNNRIGDEGVKSISEMEQLISLDISTNVIGGEGAKFISEMKQLTSL 498
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG- 412
++ I D G+ +++ + LT L++ G +I GA ++ K L SL+I + DAG
Sbjct: 499 DISGNLIYDEGVKSISEMKQLTSLNISGNQIGVEGAKFISEMKQLTSLDISKNEIGDAGA 558
Query: 413 -----LTGLVSLNVSNSRIT 427
+ L SL+V +RI+
Sbjct: 559 KFISEMKQLTSLDVYANRIS 578
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 149/299 (49%), Gaps = 8/299 (2%)
Query: 160 LNIKWCNCITDSDMKP--LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
+N+K+ + D+ +P +SG+ L S+ IS +++ G + +++LT LN+ +
Sbjct: 111 VNVKFSSWTLDAFEQPKFISGMKQLTSVDISGNRIGIEGAKSISEMKQLTSLNISNNIIG 170
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 277
S+S + L L+++ ++ D+G + S++ L L++ N I E + +
Sbjct: 171 VEGAKSISGMKHLTSLDISGNRIGDEGVKSISEMEQLISLDISTNVIGGEGAKFISEMKQ 230
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
L SL++ IG EG ++ + L L +S ++ G + +S + L S+N+S I
Sbjct: 231 LTSLDIFYNRIGGEGAKLISEMKQLTSLNISTNEIDVEGSKLISEMKQLTSLNISGNLIG 290
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
++ ++G+ L SLN+ I D G ++ + LT LD++ RI D G + K
Sbjct: 291 VEGVKSISGMKQLTSLNISGNLIGDEGAKLISEMKQLTSLDIYNNRIGDEGVKSISEMKQ 350
Query: 398 LRSLEICG------GGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
L S +I G + +G+ L SL +SN+RI G++ + +K L SL + ++
Sbjct: 351 LTSFDISNNLIYDEGAKSISGMKQLTSLTISNNRIGGEGVKFISEIKQLTSLNISKNEI 409
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 135/285 (47%), Gaps = 27/285 (9%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L S+D+ + + D G+ + + L S D + + I D G + + G+ LTSL+
Sbjct: 322 SEMKQLTSLDIYNNRIGDEGVKSISEMKQLTSFDISNNL-IYDEGAKSISGMKQLTSLTI 380
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
NN I +G+K + + L L++ + G + G+ +L SL I + N I D +
Sbjct: 381 -SNNRIGGEGVKFISEIKQLTSLNISKNEIDGEGAKFISGMKQLTSLTI-YKNGIGDEGV 438
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K +S + L SL IS +++ D G+ S+S + L L
Sbjct: 439 KSISEMKQLTSLDISNNRIGDEGVK------------------------SISEMEQLISL 474
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+++ + +G + S++ L L++ N I DE + + + L SLN+ IG EG
Sbjct: 475 DISTNVIGGEGAKFISEMKQLTSLDISGNLIYDEGVKSISEMKQLTSLNISGNQIGVEGA 534
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
++ + L L++S ++G +G + +S + L S+++ ISD
Sbjct: 535 KFISEMKQLTSLDISKNEIGDAGAKFISEMKQLTSLDVYANRISD 579
>gi|149174540|ref|ZP_01853166.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148846650|gb|EDL60987.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 309
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 154/284 (54%), Gaps = 19/284 (6%)
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
N+ + S SK+ D+G+ YL L KL L+L G VT + L +L SL + L+ +
Sbjct: 39 NISQVSFSGSKLVDAGLVYLGRLSKLRKLDLSGSKVTDDGMVHLKSLKSLREITLHGIPV 98
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
SD G +F K+ +L++LNL ++TD L HLK L +L+ L L I +GL +L+GL
Sbjct: 99 SDSGLAEFKKLSNLEILNLSRTKVTDAGLKHLKSLDSLKELFLTGLEITADGLAHLSGLK 158
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
+L+ L LS+TQ+ L HL L L + L T I+D L+++ GL+ L+ L L QI
Sbjct: 159 SLETLGLSETQITDDALAHLKTLKKLRVLLLRDTQITDEGLKQIKGLTRLQRLWLRNTQI 218
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLN 420
TD GL L + + L+L +IT++G + ++ +N +V +N
Sbjct: 219 TDDGLKYLIKMKDMEWLELNDTQITNAGISEIKVLEN------------------IVDMN 260
Query: 421 VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLP 464
+ N+ ++ + LK +KNL +L ++ ++T I +L+ + LP
Sbjct: 261 LRNTDVSDKCITSLKKMKNLGTLYIDGTEITEEGIAKLE-KSLP 303
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 138/249 (55%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
+ D+ + L L+ L+ L +S SKVTD G+ +LK L+ L + L G PV+ + L L
Sbjct: 50 LVDAGLVYLGRLSKLRKLDLSGSKVTDDGMVHLKSLKSLREITLHGIPVSDSGLAEFKKL 109
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
+L LNL+R +++D G + + SLK L L EIT + L HL GL +LE+L L
Sbjct: 110 SNLEILNLSRTKVTDAGLKHLKSLDSLKELFLTGLEITADGLAHLSGLKSLETLGLSETQ 169
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
I D+ L +L L L+ L L DTQ+ GL+ + GLT L+ + L T I+D L+ L +
Sbjct: 170 ITDDALAHLKTLKKLRVLLLRDTQITDEGLKQIKGLTRLQRLWLRNTQITDDGLKYLIKM 229
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGG 407
++ L L+ QIT+ G++ + L + ++L ++D L+ KNL +L I G
Sbjct: 230 KDMEWLELNDTQITNAGISEIKVLENIVDMNLRNTDVSDKCITSLKKMKNLGTLYIDGTE 289
Query: 408 LTDAGLTGL 416
+T+ G+ L
Sbjct: 290 ITEEGIAKL 298
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 127/240 (52%), Gaps = 3/240 (1%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
S L +DLSGS VTD G++HLK +L+ + + I +SD GL + LSNL L+ R
Sbjct: 62 SKLRKLDLSGSKVTDDGMVHLKSLKSLREITLH-GIPVSDSGLAEFKKLSNLEILNLSRT 120
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+T G+K L +L +L L GL +L GL LE+L + ITD + L
Sbjct: 121 K-VTDAGLKHLKSLDSLKELFLTGLEITADGLAHLSGLKSLETLGLSETQ-ITDDALAHL 178
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
L L+ L + +++TD G+ +KGL +L L L +T L L + + +L LN
Sbjct: 179 KTLKKLRVLLLRDTQITDEGLKQIKGLTRLQRLWLRNTQITDDGLKYLIKMKDMEWLELN 238
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
Q+++ G + + ++ +NL +++D+C+ LK + NL +L +D I +EG+ L
Sbjct: 239 DTQITNAGISEIKVLENIVDMNLRNTDVSDKCITSLKKMKNLGTLYIDGTEITEEGIAKL 298
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 136/260 (52%), Gaps = 3/260 (1%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
V SGS + D+GL++L S L+ LD + +++D G+ HL+ L +L ++ ++
Sbjct: 43 VSFSGSKLVDAGLVYLGRLSKLRKLDLSGS-KVTDDGMVHLKSLKSLREITL-HGIPVSD 100
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
G+ F L NL L+L R GL +LK L L+ L + D + LSGL +
Sbjct: 101 SGLAEFKKLSNLEILNLSRTKVTDAGLKHLKSLDSLKELFLTGLEITADG-LAHLSGLKS 159
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
L++L +S +++TD +A+LK L+KL +L L +T L + L L L L Q++
Sbjct: 160 LETLGLSETQITDDALAHLKTLKKLRVLLLRDTQITDEGLKQIKGLTRLQRLWLRNTQIT 219
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
DDG + K+ ++ L L +IT+ + +K L N+ +NL + + D+ + +L + N
Sbjct: 220 DDGLKYLIKMKDMEWLELNDTQITNAGISEIKVLENIVDMNLRNTDVSDKCITSLKKMKN 279
Query: 302 LKCLELSDTQVGSSGLRHLS 321
L L + T++ G+ L
Sbjct: 280 LGTLYIDGTEITEEGIAKLE 299
>gi|32477504|ref|NP_870498.1| adenylate cyclase regulatory protein [Rhodopirellula baltica SH 1]
gi|32448058|emb|CAD77575.1| conserved hypothetical protein-putative adenylate cyclase
regulatory protein [Rhodopirellula baltica SH 1]
Length = 513
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 156/322 (48%), Gaps = 33/322 (10%)
Query: 42 PGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQ--ISDGGL 99
PG++D M+ + S ++L + L+ + +TD LK + SLD F + ++D GL
Sbjct: 176 PGIDDAGMENLKSL-ANLKRLTLADTAITDQ---TLKTVGEMTSLDALFLRRTGVTDEGL 231
Query: 100 EHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES 159
E L GLS L ++ R N I GM + A + L+ + LE+ GLV L L L+S
Sbjct: 232 ELLTGLSKLRAIDLRNTN-IGDAGMDSLAKIKTLIDVKLEKSKVTDEGLVKLAPL-PLKS 289
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
+N +C I MK L L++LQ SK+ D +A LKGL KL L + GC VT
Sbjct: 290 INFNYCTTINGPTMKMLGQTPTLENLQGDYSKINDESMAELKGLSKLKRLRIRGCDVTGE 349
Query: 220 ------------------------CLDSLSALGSLFYLNLNRCQL-SDDGCEKFSKIGSL 254
L +S L ++ +++++ C+L S +G + K+ L
Sbjct: 350 GIQHIAGNKALARFELRDSSVDDDGLKVISQLPAVTHVDISECRLASPEGIAQLGKLTGL 409
Query: 255 KVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS 314
L L + DE L L NLE LNL S + DE L L + LK L ++ TQ+G
Sbjct: 410 TYLGLWETKTNDETLAGFGDLVNLEELNLKSTAVTDESLPVLMKMTKLKTLNVAGTQLGD 469
Query: 315 SGLRHLSGLTNLESINLSFTGI 336
L+ L NL+S+N++ T I
Sbjct: 470 DSFLELAKLPNLKSMNVANTSI 491
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 179/395 (45%), Gaps = 44/395 (11%)
Query: 69 VTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLE----HLRGLSNLTSLSFRRNNAITAQG 123
+T++G I K D N+ F I GG+E HLRG+ N T +F I G
Sbjct: 128 LTEAGYILTKNDDGNV----VEFSIANQKGGIEESLQHLRGIPNTTEATFN-GPGIDDAG 182
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
M+ L NL +L L ITD +K + +T+L
Sbjct: 183 MENLKSLANLKRLTLADT-------------------------AITDQTLKTVGEMTSLD 217
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
+L + + VTD G+ L GL KL ++L + A +DSL+ + +L + L + +++D+
Sbjct: 218 ALFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDSLAKIKTLIDVKLEKSKVTDE 277
Query: 244 GCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNL 302
G K + + LK +N + I + L LE+L D I DE + L GL L
Sbjct: 278 GLVKLAPL-PLKSINFNYCTTINGPTMKMLGQTPTLENLQGDYSKINDESMAELKGLSKL 336
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL-DARQIT 361
K L + V G++H++G L L + + D L+ ++ L ++ +++ + R +
Sbjct: 337 KRLRIRGCDVTGEGIQHIAGNKALARFELRDSSVDDDGLKVISQLPAVTHVDISECRLAS 396
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL------TG 415
G+A L LTGLT+L L+ + D A + NL L + +TD L T
Sbjct: 397 PEGIAQLGKLTGLTYLGLWETKTNDETLAGFGDLVNLEELNLKSTAVTDESLPVLMKMTK 456
Query: 416 LVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
L +LNV+ +++ L L NL+S+ + + +
Sbjct: 457 LKTLNVAGTQLGDDSFLELAKLPNLKSMNVANTSI 491
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
+E L HL+G+ N + GI D G+ NL L NLK L L+DT + L+ + +T+
Sbjct: 156 EESLQHLRGIPNTTEATFNGPGIDDAGMENLKSLANLKRLTLADTAITDQTLKTVGEMTS 215
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L+++ L TG++D L L GLS L++++L I D G+ +L + L + L +++T
Sbjct: 216 LDALFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDSLAKIKTLIDVKLEKSKVT 275
Query: 386 DSGAAYLRNFKNLRSLE------ICGGGLTDAGLTG-LVSLNVSNSRITSAGLRHLKPLK 438
D G L L+S+ I G + G T L +L S+I + LK L
Sbjct: 276 DEGLVKLAPLP-LKSINFNYCTTINGPTMKMLGQTPTLENLQGDYSKINDESMAELKGLS 334
Query: 439 NLRSLTLESCKVTANDIKRL 458
L+ L + C VT I+ +
Sbjct: 335 KLKRLRIRGCDVTGEGIQHI 354
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 21/270 (7%)
Query: 192 VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI 251
V + IA KG + +L +L G P T N + D G E +
Sbjct: 143 VVEFSIANQKGGIEESLQHLRGIPNTTEA-------------TFNGPGIDDAGMENLKSL 189
Query: 252 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ 311
+LK L L ITD+ L + +T+L++L L G+ DEGL LTGL L+ ++L +T
Sbjct: 190 ANLKRLTLADTAITDQTLKTVGEMTSLDALFLRRTGVTDEGLELLTGLSKLRAIDLRNTN 249
Query: 312 VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTS 370
+G +G+ L+ + L + L + ++D L KLA L LKS+N + I + L
Sbjct: 250 IGDAGMDSLAKIKTLIDVKLEKSKVTDEGLVKLAPL-PLKSINFNYCTTINGPTMKMLGQ 308
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL------TGLVSLNVSNS 424
L +L ++I D A L+ L+ L I G +T G+ L + +S
Sbjct: 309 TPTLENLQGDYSKINDESMAELKGLSKLKRLRIRGCDVTGEGIQHIAGNKALARFELRDS 368
Query: 425 RITSAGLRHLKPLKNLRSLTLESCKVTAND 454
+ GL+ + L + + + C++ + +
Sbjct: 369 SVDDDGLKVISQLPAVTHVDISECRLASPE 398
>gi|384245058|gb|EIE18554.1| L domain-like protein [Coccomyxa subellipsoidea C-169]
Length = 731
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 223/421 (52%), Gaps = 22/421 (5%)
Query: 70 TDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAG 129
T + L K S LQ L+ C +I D GL+ L L++LTS++ + ITAQG+ A +G
Sbjct: 312 TGAELREWKGLSLLQELNLKGCYKIEDAGLQGLSLLTSLTSINMQECWQITAQGLAALSG 371
Query: 130 LINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS- 188
L ++ ++L+ C +I L L L +L +LN++ C+ + DS + PLS L +L+SL +S
Sbjct: 372 LSRMMDVNLQGCRKI-SSLEPLASLSRLAALNLRNCDGLGDSSLGPLSRLVSLRSLDLSG 430
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCP--VTAACLDSLSALGSLFYLNLNRC-QLSDDGC 245
C+ +T G+ L L LT L L+ C +A L LS L +L LNL+ C Q G
Sbjct: 431 CTHLTGRGLLPLSSLTGLTALKLQHCAGIRRSADLAPLSLLTALSTLNLSGCSQEEGAGI 490
Query: 246 EKFSKIGSLKVLNL-GFNEIT--DECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCN 301
+ + L+ L+L G+ +T D+ L+ L L + SLNL C + D GL + + +
Sbjct: 491 SSLATLTCLRALSLDGWRHVTFIDDGLMALTSLRGVASLNLQGCTSLTDVGLAAIGHMTS 550
Query: 302 LKCLELSD-TQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNL-DAR 358
L + L D Q+ G +G+ +L S++L + + +SD +A ++SL++LNL +
Sbjct: 551 LTNVNLQDCRQITGEGFAGWAGMAHLTSLSLQNASMVSDAGCCAIARITSLRTLNLKNCP 610
Query: 359 QITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICG-GGLTDAG---- 412
+TD LAALT L L HL L G +++D+ A+ +L+ LE LTDAG
Sbjct: 611 ALTDDCLAALTPLERLCHLRLQGNQQLSDAALAHCARMPSLQHLETSNCWHLTDAGLTRL 670
Query: 413 --LTGLVSLNVSNS-RITSAGLRHL-KPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVS 468
LT L L++S ++T G+ HL K L L +L + C K +R L N V+
Sbjct: 671 TALTTLAHLDLSYCWQVTDRGVEHLVKSLTTLVTLNVIGCHRLTPRAKCQVARLLGNPVN 730
Query: 469 F 469
Sbjct: 731 I 731
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 152/530 (28%), Positives = 240/530 (45%), Gaps = 106/530 (20%)
Query: 27 AFRDCALQDLCLGQYPGV-NDKWMDVIASQGSSLLSVDLSG-SDVTDSGL---------- 74
A+R ALQ L + V ND+ ++ +L SV L+G DVTD GL
Sbjct: 90 AYRFPALQQLDMSACRRVSNDELANL--RHLPNLTSVVLAGCEDVTDEGLLHLSHLSRLA 147
Query: 75 -IHLKDCSNL--------------QSLDFNFCIQ-------------------------- 93
++L +C + SL+ + C+
Sbjct: 148 SLNLSNCCKVTDGGLLALAALRQLGSLNLSGCVSLSERGLAAIAARLRRLHTLKLGGTSR 207
Query: 94 ---ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIH-GGLV 149
ISD + + GL++LT L ++ IT G+ L L L L C R+ GL
Sbjct: 208 VATISDASVAAIAGLTSLTHLDLSGSHDITDAGLLHLGSLSRLRTLVLWNCMRVSVDGLA 267
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTL 208
+ L + L+++ C ++D+ ++ L L L + +C + T + + KGL L
Sbjct: 268 VFRQLPAVADLSLRGCAQLSDALCGSVAHLEQLTRLDLRACERFTGAELREWKGLSLLQE 327
Query: 209 LNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNL-GFNEIT 265
LNL+GC + A L LS L SL +N+ C Q++ G S + + +NL G +I+
Sbjct: 328 LNLKGCYKIEDAGLQGLSLLTSLTSINMQECWQITAQGLAALSGLSRMMDVNLQGCRKIS 387
Query: 266 DECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGL 323
L L L+ L +LNL +C G+GD L L+ L +L+ L+LS T + GL LS L
Sbjct: 388 S--LEPLASLSRLAALNLRNCDGLGDSSLGPLSRLVSLRSLDLSGCTHLTGRGLLPLSSL 445
Query: 324 TNLESI--------------------------NLSFTGISDGS-LRKLAGLSSLKSLNLD 356
T L ++ NLS +G+ + LA L+ L++L+LD
Sbjct: 446 TGLTALKLQHCAGIRRSADLAPLSLLTALSTLNLSGCSQEEGAGISSLATLTCLRALSLD 505
Query: 357 A-RQIT--DTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSL------EICGG 406
R +T D GL ALTSL G+ L+L G +TD G A + + +L ++ +I G
Sbjct: 506 GWRHVTFIDDGLMALTSLRGVASLNLQGCTSLTDVGLAAIGHMTSLTNVNLQDCRQITGE 565
Query: 407 GLTD-AGLTGLVSLNVSN-SRITSAGLRHLKPLKNLRSLTLESCKVTAND 454
G AG+ L SL++ N S ++ AG + + +LR+L L++C +D
Sbjct: 566 GFAGWAGMAHLTSLSLQNASMVSDAGCCAIARITSLRTLNLKNCPALTDD 615
>gi|224007994|ref|XP_002292956.1| hypothetical protein THAPSDRAFT_16210 [Thalassiosira pseudonana
CCMP1335]
gi|220971082|gb|EED89417.1| hypothetical protein THAPSDRAFT_16210 [Thalassiosira pseudonana
CCMP1335]
Length = 301
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 128/230 (55%), Gaps = 13/230 (5%)
Query: 250 KIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG---LCNLKCLE 306
KI +LK L L ++ + D L H + L LE LNLDSC +GD + +L + N+ L+
Sbjct: 69 KINNLKSLELCYSGVQDNHLAHFRSLPMLEELNLDSCHLGDWSIAHLADNNVIPNITSLD 128
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA 366
L+D + GL ++ ++ ++L + ++ LR L+ ++ L+ LNLD+R+I D GL
Sbjct: 129 LADADISDFGLSKIAQFKQMKRLSLFYCNVTSAGLRHLSSMTKLEVLNLDSREIGDEGLK 188
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT------GLVSLN 420
L L L LD+F R+TD G +R K L+SLE+CGGG+ D G T L SLN
Sbjct: 189 HLRDLP-LQSLDVFSGRVTDLGYGCIRLIKTLQSLELCGGGVGDIGCTHLATIPNLTSLN 247
Query: 421 VS-NSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSF 469
+S N RIT+ G L L NL++L L + VT + ++ DL L S
Sbjct: 248 LSQNERITNRGAASLAALSNLKALNLSNTAVTPDALRYFS--DLSKLKSL 295
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 146/300 (48%), Gaps = 28/300 (9%)
Query: 133 LVKLDLERCTRI-HGGLVNLKGL-MKLESLNIKWCNCITDSDMKPLS------------- 177
L L L C R+ +VN+ L L ++N+ C C+TD ++ L
Sbjct: 1 LRTLSLANCRRLTDEAVVNVSHLSTSLVAVNLGGCRCLTDRSLEALGGLLGLTKLDLSQV 60
Query: 178 --------GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV---TAACLDSLSA 226
+ NLKSL++ S V D+ +A+ + L L LNL+ C + + A L +
Sbjct: 61 CLRSSWQGKINNLKSLELCYSGVQDNHLAHFRSLPMLEELNLDSCHLGDWSIAHLADNNV 120
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC 286
+ ++ L+L +SD G K ++ +K L+L + +T L HL +T LE LNLDS
Sbjct: 121 IPNITSLDLADADISDFGLSKIAQFKQMKRLSLFYCNVTSAGLRHLSSMTKLEVLNLDSR 180
Query: 287 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAG 346
IGDEGL +L L L+ L++ +V G + + L+S+ L G+ D LA
Sbjct: 181 EIGDEGLKHLRDL-PLQSLDVFSGRVTDLGYGCIRLIKTLQSLELCGGGVGDIGCTHLAT 239
Query: 347 LSSLKSLNLDARQ-ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
+ +L SLNL + IT+ G A+L +L+ L L+L +T Y + L+SL + G
Sbjct: 240 IPNLTSLNLSQNERITNRGAASLAALSNLKALNLSNTAVTPDALRYFSDLSKLKSLALYG 299
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 23/176 (13%)
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF------- 113
S+DL+ +D++D GL + ++ L +C ++ GL HL ++ L L+
Sbjct: 126 SLDLADADISDFGLSKIAQFKQMKRLSLFYC-NVTSAGLRHLSSMTKLEVLNLDSREIGD 184
Query: 114 ---RRNNAITAQGMKAFAG--------LINLVKL--DLERCTRIHG--GLVNLKGLMKLE 158
+ + Q + F+G I L+K LE C G G +L + L
Sbjct: 185 EGLKHLRDLPLQSLDVFSGRVTDLGYGCIRLIKTLQSLELCGGGVGDIGCTHLATIPNLT 244
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC 214
SLN+ IT+ L+ L+NLK+L +S + VT + Y L KL L L GC
Sbjct: 245 SLNLSQNERITNRGAASLAALSNLKALNLSNTAVTPDALRYFSDLSKLKSLALYGC 300
>gi|290984426|ref|XP_002674928.1| predicted protein [Naegleria gruberi]
gi|284088521|gb|EFC42184.1| predicted protein [Naegleria gruberi]
Length = 612
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 204/446 (45%), Gaps = 32/446 (7%)
Query: 32 ALQDLCLGQYPGVN-DKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSL---- 86
++ +LC+ GV D Q L S+++ G D+ D + + + L SL
Sbjct: 84 SVTNLCIPYVVGVKIDSESVTYIGQLKQLTSLEIQGMDIDDEHVESMAELKQLTSLYISG 143
Query: 87 -------------DFNFCIQ-------ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
FN + I + G +++ L LTSL N++I G+
Sbjct: 144 NYIGSEGVKIISESFNKLTKLNISANYIDNVGAKYISQLKQLTSLEIACNDSIGDAGIIY 203
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
+GL +L LD+ R GG + +L LNI C+ I D ++ +S L L L
Sbjct: 204 LSGLEHLTNLDISRIKIGSGGAQYIGKFEQLTCLNINTCS-IDDKVLQSISQLKKLIVLH 262
Query: 187 ISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCE 246
IS ++++ G Y+ L +LT L + + + +S L L YL++ + + ++G +
Sbjct: 263 ISENEISIEGAKYISKLNQLTSLYISESGIRSEQARYISELKQLTYLDVTKNYVREEGAK 322
Query: 247 KFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE 306
+ L L + N + ++ ++ +T L L++ I +G+ ++ L L L
Sbjct: 323 YIRNMKKLTTLLVSENYVCEQGAEYISEMTQLTKLDISVNNINKKGVFHICKLKQLTELS 382
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA 366
+ ++ GL ++S L NL +N ++ + ++ ++ L+ L LN+ +I+D G
Sbjct: 383 ILESHFDGEGLEYISELKNLTILNFPYSEMRGVGVKYISQLNQLTCLNIPYNRISDEGAK 442
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLN 420
++ L L L + I+ GA YL + KNL L I G L + G L L L+
Sbjct: 443 YISELKQLKELSISDNSISSEGANYLTDLKNLTKLVITGNNLGNDGAMHISELKKLTILD 502
Query: 421 VSNSRITSAGLRHLKPLKNLRSLTLE 446
+S++ I+S G +HL LKNL L ++
Sbjct: 503 ISHNSISSEGAKHLSDLKNLTELVIK 528
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 154/321 (47%), Gaps = 2/321 (0%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
+IS G +++ L+ LTSL + + I ++ + + L L LD+ + G ++
Sbjct: 267 EISIEGAKYISKLNQLTSL-YISESGIRSEQARYISELKQLTYLDVTKNYVREEGAKYIR 325
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
+ KL +L + N + + + +S +T L L IS + + G+ ++ L++LT L++
Sbjct: 326 NMKKLTTLLVSE-NYVCEQGAEYISEMTQLTKLDISVNNINKKGVFHICKLKQLTELSIL 384
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
L+ +S L +L LN ++ G + S++ L LN+ +N I+DE ++
Sbjct: 385 ESHFDGEGLEYISELKNLTILNFPYSEMRGVGVKYISQLNQLTCLNIPYNRISDEGAKYI 444
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
L L+ L++ I EG LT L NL L ++ +G+ G H+S L L +++S
Sbjct: 445 SELKQLKELSISDNSISSEGANYLTDLKNLTKLVITGNNLGNDGAMHISELKKLTILDIS 504
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
IS + L+ L +L L + + + G +++ L LTHLD+ I+D G +
Sbjct: 505 HNSISSEGAKHLSDLKNLTELVIKGNNLGNDGAMSISELKQLTHLDVCDNNISDEGFKAI 564
Query: 393 RNFKNLRSLEICGGGLTDAGL 413
L L I ++ G+
Sbjct: 565 SKMNQLTRLSIYENSISGEGV 585
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 164/354 (46%), Gaps = 12/354 (3%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGL--EH 101
++DK + I SQ L+ + +S ++++ G ++ + L SL IS+ G+ E
Sbjct: 244 IDDKVLQSI-SQLKKLIVLHISENEISIEGAKYISKLNQLTSL------YISESGIRSEQ 296
Query: 102 LRGLSNLTSLSF--RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES 159
R +S L L++ N + +G K + L L + G + + +L
Sbjct: 297 ARYISELKQLTYLDVTKNYVREEGAKYIRNMKKLTTLLVSENYVCEQGAEYISEMTQLTK 356
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
L+I N I + + L L L I S G+ Y+ L+ LT+LN +
Sbjct: 357 LDIS-VNNINKKGVFHICKLKQLTELSILESHFDGEGLEYISELKNLTILNFPYSEMRGV 415
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
+ +S L L LN+ ++SD+G + S++ LK L++ N I+ E +L L NL
Sbjct: 416 GVKYISQLNQLTCLNIPYNRISDEGAKYISELKQLKELSISDNSISSEGANYLTDLKNLT 475
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
L + +G++G ++++ L L L++S + S G +HLS L NL + + + +
Sbjct: 476 KLVITGNNLGNDGAMHISELKKLTILDISHNSISSEGAKHLSDLKNLTELVIKGNNLGND 535
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
++ L L L++ I+D G A++ + LT L ++ I+ G ++R
Sbjct: 536 GAMSISELKQLTHLDVCDNNISDEGFKAISKMNQLTRLSIYENSISGEGVEFIR 589
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 181/414 (43%), Gaps = 32/414 (7%)
Query: 54 SQGSSLLSVDLSGSD-VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLS 112
SQ L S++++ +D + D+G+I+L +L +LD + I+I GG +++ LT L+
Sbjct: 180 SQLKQLTSLEIACNDSIGDAGIIYLSGLEHLTNLDISR-IKIGSGGAQYIGKFEQLTCLN 238
Query: 113 FR-----------------------RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLV 149
N I+ +G K + L L L +
Sbjct: 239 INTCSIDDKVLQSISQLKKLIVLHISENEISIEGAKYISKLNQLTSLYISESGIRSEQAR 298
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
+ L +L L++ N + + K + + L +L +S + V + G Y+ + +LT L
Sbjct: 299 YISELKQLTYLDVTK-NYVREEGAKYIRNMKKLTTLLVSENYVCEQGAEYISEMTQLTKL 357
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
++ + + + L L L++ +G E S++ +L +LN ++E+ +
Sbjct: 358 DISVNNINKKGVFHICKLKQLTELSILESHFDGEGLEYISELKNLTILNFPYSEMRGVGV 417
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
++ L L LN+ I DEG ++ L LK L +SD + S G +L+ L NL +
Sbjct: 418 KYISQLNQLTCLNIPYNRISDEGAKYISELKQLKELSISDNSISSEGANYLTDLKNLTKL 477
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGA 389
++ + + ++ L L L++ I+ G L+ L LT L + G + + GA
Sbjct: 478 VITGNNLGNDGAMHISELKKLTILDISHNSISSEGAKHLSDLKNLTELVIKGNNLGNDGA 537
Query: 390 AYLRNFKNLRSLEICGGGLTDAGLTGLVSLN------VSNSRITSAGLRHLKPL 437
+ K L L++C ++D G + +N + + I+ G+ ++ +
Sbjct: 538 MSISELKQLTHLDVCDNNISDEGFKAISKMNQLTRLSIYENSISGEGVEFIRKM 591
>gi|46445970|ref|YP_007335.1| hypothetical protein pc0336 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399611|emb|CAF23060.1| hypothetical protein pc0336 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 602
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 123/322 (38%), Positives = 182/322 (56%), Gaps = 11/322 (3%)
Query: 77 LKDCSN-LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
LK SN ++ LDF ++D L L+ NL L +R + +T G+ A L+ L
Sbjct: 278 LKHFSNEIERLDFLENDYLTDTHLLVLKNCKNLKELYLQRCHNLTDAGLAHLAPLLALQH 337
Query: 136 LDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVT 193
LDL C + GL +L LM L+ LN+ +C +TD+ + L+ L L+ L +S C +T
Sbjct: 338 LDLSECNNLTDAGLAHLTPLMALQHLNLSYCKNLTDAGLAHLTPLVALQYLDLSGCDNLT 397
Query: 194 DSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKI 251
D+G+A+L L L L L C +T A L L+ L +L YL+LN C +L+D G + +
Sbjct: 398 DAGLAHLTPLMALQHLGLSACDKLTDAGLAHLTPLVALQYLSLNGCDKLTDVGLAHLTPL 457
Query: 252 GSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD 309
+L LNL + +++TD L HL L L+ LNL C + D GL +LT L L+ L+L+
Sbjct: 458 VALTHLNLSWCDKLTDAGLAHLTPLVALQHLNLRWCRKLTDAGLAHLTPLVALQHLDLNR 517
Query: 310 -TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLA 366
++ +GL HL+ L NL +NLS+ ++D L L L +L+ LNL R++TD GLA
Sbjct: 518 CPKLTDAGLAHLTSLVNLRHLNLSYCRKLTDVGLAHLTPLVALQHLNLSCCRKLTDAGLA 577
Query: 367 ALTSLTGLTHLDLFGA-RITDS 387
L SL L HLDL G ++TD+
Sbjct: 578 HLASLLALQHLDLSGCDKLTDA 599
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 154/276 (55%), Gaps = 7/276 (2%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
L +TD+ L+ LK+C NL+ L C ++D GL HL L L L N +T G
Sbjct: 291 LENDYLTDTHLLVLKNCKNLKELYLQRCHNLTDAGLAHLAPLLALQHLDLSECNNLTDAG 350
Query: 124 MKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNL 182
+ L+ L L+L C + GL +L L+ L+ L++ C+ +TD+ + L+ L L
Sbjct: 351 LAHLTPLMALQHLNLSYCKNLTDAGLAHLTPLVALQYLDLSGCDNLTDAGLAHLTPLMAL 410
Query: 183 KSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
+ L +S C K+TD+G+A+L L L L+L GC +T L L+ L +L +LNL+ C +
Sbjct: 411 QHLGLSACDKLTDAGLAHLTPLVALQYLSLNGCDKLTDVGLAHLTPLVALTHLNLSWCDK 470
Query: 240 LSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLT 297
L+D G + + +L+ LNL + ++TD L HL L L+ L+L+ C + D GL +LT
Sbjct: 471 LTDAGLAHLTPLVALQHLNLRWCRKLTDAGLAHLTPLVALQHLDLNRCPKLTDAGLAHLT 530
Query: 298 GLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLS 332
L NL+ L LS ++ GL HL+ L L+ +NLS
Sbjct: 531 SLVNLRHLNLSYCRKLTDVGLAHLTPLVALQHLNLS 566
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 163/304 (53%), Gaps = 28/304 (9%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGC 214
++E L+ + +TD+ + L NLK L + C +TD+G+A+L L L L+L C
Sbjct: 284 EIERLDFLENDYLTDTHLLVLKNCKNLKELYLQRCHNLTDAGLAHLAPLLALQHLDLSEC 343
Query: 215 -PVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNL-GFNEITDECLVH 271
+T A L L+ L +L +LNL+ C+ L+D G + + +L+ L+L G + +TD L H
Sbjct: 344 NNLTDAGLAHLTPLMALQHLNLSYCKNLTDAGLAHLTPLVALQYLDLSGCDNLTDAGLAH 403
Query: 272 LKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESI 329
L L L+ L L +C + D GL +LT L L+ L L+ ++ GL HL+ L L +
Sbjct: 404 LTPLMALQHLGLSACDKLTDAGLAHLTPLVALQYLSLNGCDKLTDVGLAHLTPLVALTHL 463
Query: 330 NLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFG-ARITD 386
NLS+ ++D L L L +L+ LNL R++TD GLA LT L L HLDL ++TD
Sbjct: 464 NLSWCDKLTDAGLAHLTPLVALQHLNLRWCRKLTDAGLAHLTPLVALQHLDLNRCPKLTD 523
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSR-ITSAGLRHLKPLKNLRSLTL 445
+G A+L + NLR LN+S R +T GL HL PL L+ L L
Sbjct: 524 AGLAHLTSLVNLR------------------HLNLSYCRKLTDVGLAHLTPLVALQHLNL 565
Query: 446 ESCK 449
C+
Sbjct: 566 SCCR 569
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Query: 40 QYPGVN--DKWMDVIASQGSSLLSV---DLSGSD-VTDSGLIHLKDCSNLQSLDFNFCIQ 93
QY +N DK DV + + L+++ +LS D +TD+GL HL LQ L+ +C +
Sbjct: 436 QYLSLNGCDKLTDVGLAHLTPLVALTHLNLSWCDKLTDAGLAHLTPLVALQHLNLRWCRK 495
Query: 94 ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLK 152
++D GL HL L L L R +T G+ L+NL L+L C ++ GL +L
Sbjct: 496 LTDAGLAHLTPLVALQHLDLNRCPKLTDAGLAHLTSLVNLRHLNLSYCRKLTDVGLAHLT 555
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDS 195
L+ L+ LN+ C +TD+ + L+ L L+ L +S C K+TD+
Sbjct: 556 PLVALQHLNLSCCRKLTDAGLAHLASLLALQHLDLSGCDKLTDA 599
>gi|168699408|ref|ZP_02731685.1| hypothetical protein GobsU_07802 [Gemmata obscuriglobus UQM 2246]
Length = 320
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 132/256 (51%), Gaps = 27/256 (10%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N +TD+ MK L+ L NL SL++ VTD+G+ L L+KLT L L VT A + L+
Sbjct: 59 NKMTDAGMKELAALRNLTSLKLIGPVVTDAGLKALAPLKKLTTLQLTAAKVTDAGVKELA 118
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
+L SL L+L ++D G ++ + + L L+L ++TD L L L NL +L+L S
Sbjct: 119 SLASLTTLDLASTNVTDAGVKELAPLTRLTALDLSGTKVTDAGLKELAPLKNLVTLSLGS 178
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDT------------------------QVGSSGLRHLS 321
+ L L L NLK L L DT +V +GL+ L+
Sbjct: 179 TAVTGASLKELAPLTNLKTLHLYDTKMTDAGLKELAPLTSLTTLTLAATKVTDAGLKGLT 238
Query: 322 GLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG 381
L NL +NL T ++ L++LA L +L L+LD +TD GL LT LT L L L G
Sbjct: 239 PLKNLSDLNLGGTKVTSAGLKELAALKNLTVLDLDVTAVTDAGLKELTPLTNLKVLRLVG 298
Query: 382 ARITDSGAAYLRNFKN 397
A++T G ++ FK+
Sbjct: 299 AKVTTKG---VKEFKD 311
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 145/269 (53%), Gaps = 18/269 (6%)
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
K+TD+G+ L L+ LT L L G VT A L +L+ L L L L +++D G ++ +
Sbjct: 60 KMTDAGMKELAALRNLTSLKLIGPVVTDAGLKALAPLKKLTTLQLTAAKVTDAGVKELAS 119
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
+ SL L+L +TD + L LT L +L+L + D GL L L NL L L T
Sbjct: 120 LASLTTLDLASTNVTDAGVKELAPLTRLTALDLSGTKVTDAGLKELAPLKNLVTLSLGST 179
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
V + L+ L+ LTNL++++L T ++D L++LA L+SL +L L A ++TD GL LT
Sbjct: 180 AVTGASLKELAPLTNLKTLHLYDTKMTDAGLKELAPLTSLTTLTLAATKVTDAGLKGLTP 239
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAG 430
L L+ L+L G ++T +G L KNL L+ L+V + +T AG
Sbjct: 240 LKNLSDLNLGGTKVTSAGLKELAALKNLTVLD----------------LDV--TAVTDAG 281
Query: 431 LRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
L+ L PL NL+ L L KVT +K +
Sbjct: 282 LKELTPLTNLKVLRLVGAKVTTKGVKEFK 310
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 122/252 (48%), Gaps = 26/252 (10%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
+++D G++ L L NLTSL +T G+KA A L L L L G+ L
Sbjct: 60 KMTDAGMKELAALRNLTSLKLI-GPVVTDAGLKALAPLKKLTTLQLTAAKVTDAGVKELA 118
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
L L +L++ N +TD+ +K L+ LT L +L +S +KVTD+G+ L L+ L L+L
Sbjct: 119 SLASLTTLDLASTN-VTDAGVKELAPLTRLTALDLSGTKVTDAGLKELAPLKNLVTLSLG 177
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEK------------------------F 248
VT A L L+ L +L L+L +++D G ++
Sbjct: 178 STAVTGASLKELAPLTNLKTLHLYDTKMTDAGLKELAPLTSLTTLTLAATKVTDAGLKGL 237
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
+ + +L LNLG ++T L L L NL L+LD + D GL LT L NLK L L
Sbjct: 238 TPLKNLSDLNLGGTKVTSAGLKELAALKNLTVLDLDVTAVTDAGLKELTPLTNLKVLRLV 297
Query: 309 DTQVGSSGLRHL 320
+V + G++
Sbjct: 298 GAKVTTKGVKEF 309
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 119/239 (49%), Gaps = 27/239 (11%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L S+ L G VTD+GL L L +L +++D G++ L L++LT+L N
Sbjct: 75 LTSLKLIGPVVTDAGLKALAPLKKLTTLQLT-AAKVTDAGVKELASLASLTTLDLASTN- 132
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
+T G+K A L L LDL GL L L L +L++ +T + +K L+
Sbjct: 133 VTDAGVKELAPLTRLTALDLSGTKVTDAGLKELAPLKNLVTLSL-GSTAVTGASLKELAP 191
Query: 179 LTNLKSLQI------------------------SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
LTNLK+L + + +KVTD+G+ L L+ L+ LNL G
Sbjct: 192 LTNLKTLHLYDTKMTDAGLKELAPLTSLTTLTLAATKVTDAGLKGLTPLKNLSDLNLGGT 251
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
VT+A L L+AL +L L+L+ ++D G ++ + + +LKVL L ++T + + K
Sbjct: 252 KVTSAGLKELAALKNLTVLDLDVTAVTDAGLKELTPLTNLKVLRLVGAKVTTKGVKEFK 310
>gi|417301579|ref|ZP_12088730.1| conserved hypothetical protein, secreted [Rhodopirellula baltica
WH47]
gi|327542171|gb|EGF28664.1| conserved hypothetical protein, secreted [Rhodopirellula baltica
WH47]
Length = 442
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 152/320 (47%), Gaps = 29/320 (9%)
Query: 42 PGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEH 101
PG++D M+ + S L + L+ + +TD L ++Q L F ++D GLE
Sbjct: 105 PGIDDAGMENLTSL-PKLKYLTLADTAITDETLKTAGKLDSVQGL-FLRRTGVTDEGLEL 162
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLN 161
L GLS L ++ R N I GM + A + L+ + LE+ GLV L L L+S+N
Sbjct: 163 LTGLSKLRAIDLRNTN-IGDAGMDSLAKIKTLIDVQLEKSKVTDEGLVKLAPL-PLKSIN 220
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA-- 219
+C I MK L L+ LQ SK+ D+ +A LKGL KL L + GC VT
Sbjct: 221 FNYCTTINGPTMKMLGQTPTLEYLQGDYSKINDASMAELKGLSKLKRLRIRGCDVTGEGI 280
Query: 220 ----------------------CLDSLSALGSLFYLNLNRCQL-SDDGCEKFSKIGSLKV 256
L +S L ++ Y++++ C+L S +G + K+ L
Sbjct: 281 QHIAGNKALARFELRDSSVDDDGLKVISQLPAVTYVDISECRLASPEGIAQLGKLTGLTY 340
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
L L + DE L L NLE LNL S + DE L L + LK L ++ TQ+G
Sbjct: 341 LGLWETKTNDETLAGFGDLVNLEELNLKSTAVTDESLPVLMKMTKLKTLNVAGTQLGDDS 400
Query: 317 LRHLSGLTNLESINLSFTGI 336
L+ L NL+S+N++ T I
Sbjct: 401 FLELAKLPNLKSMNVANTSI 420
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 161/352 (45%), Gaps = 10/352 (2%)
Query: 107 NLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCN 166
N+ S + ++ +G+ N K G+ NL L KL+ L +
Sbjct: 71 NVVEFSIANQKGGIEESLQHLSGIPNTTKATFNGPGIDDAGMENLTSLPKLKYLTLADT- 129
Query: 167 CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA 226
ITD +K L +++ L + + VTD G+ L GL KL ++L + A +DSL+
Sbjct: 130 AITDETLKTAGKLDSVQGLFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDSLAK 189
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDS 285
+ +L + L + +++D+G K + + LK +N + I + L LE L D
Sbjct: 190 IKTLIDVQLEKSKVTDEGLVKLAPL-PLKSINFNYCTTINGPTMKMLGQTPTLEYLQGDY 248
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
I D + L GL LK L + V G++H++G L L + + D L+ ++
Sbjct: 249 SKINDASMAELKGLSKLKRLRIRGCDVTGEGIQHIAGNKALARFELRDSSVDDDGLKVIS 308
Query: 346 GLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
L ++ +++ + R + G+A L LTGLT+L L+ + D A + NL L +
Sbjct: 309 QLPAVTYVDISECRLASPEGIAQLGKLTGLTYLGLWETKTNDETLAGFGDLVNLEELNLK 368
Query: 405 GGGLTDAGL------TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
+TD L T L +LNV+ +++ L L NL+S+ + + +
Sbjct: 369 STAVTDESLPVLMKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNVANTSI 420
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 156/336 (46%), Gaps = 6/336 (1%)
Query: 71 DSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGL 130
+ L HL N FN I D G+E+L L L L+ + AIT + +K L
Sbjct: 85 EESLQHLSGIPNTTKATFN-GPGIDDAGMENLTSLPKLKYLTLA-DTAITDETLKTAGKL 142
Query: 131 INLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCS 190
++ L L R GL L GL KL +++++ N I D+ M L+ + L +Q+ S
Sbjct: 143 DSVQGLFLRRTGVTDEGLELLTGLSKLRAIDLRNTN-IGDAGMDSLAKIKTLIDVQLEKS 201
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS 249
KVTD G+ L L L +N C + + L +L YL + +++D +
Sbjct: 202 KVTDEGLVKLAPL-PLKSINFNYCTTINGPTMKMLGQTPTLEYLQGDYSKINDASMAELK 260
Query: 250 KIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSD 309
+ LK L + ++T E + H+ G L L + D+GL ++ L + +++S+
Sbjct: 261 GLSKLKRLRIRGCDVTGEGIQHIAGNKALARFELRDSSVDDDGLKVISQLPAVTYVDISE 320
Query: 310 TQVGSS-GLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
++ S G+ L LT L + L T +D +L L +L+ LNL + +TD L L
Sbjct: 321 CRLASPEGIAQLGKLTGLTYLGLWETKTNDETLAGFGDLVNLEELNLKSTAVTDESLPVL 380
Query: 369 TSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
+T L L++ G ++ D L NL+S+ +
Sbjct: 381 MKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNVA 416
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 96/200 (48%), Gaps = 8/200 (4%)
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
+E L HL G+ N + GI D G+ NLT L LK L L+DT + L+ L +
Sbjct: 85 EESLQHLSGIPNTTKATFNGPGIDDAGMENLTSLPKLKYLTLADTAITDETLKTAGKLDS 144
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
++ + L TG++D L L GLS L++++L I D G+ +L + L + L +++T
Sbjct: 145 VQGLFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDSLAKIKTLIDVQLEKSKVT 204
Query: 386 DSGAAYLRNFKNLRSLE------ICGGGLTDAGLTG-LVSLNVSNSRITSAGLRHLKPLK 438
D G L L+S+ I G + G T L L S+I A + LK L
Sbjct: 205 DEGLVKLAPLP-LKSINFNYCTTINGPTMKMLGQTPTLEYLQGDYSKINDASMAELKGLS 263
Query: 439 NLRSLTLESCKVTANDIKRL 458
L+ L + C VT I+ +
Sbjct: 264 KLKRLRIRGCDVTGEGIQHI 283
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 9/290 (3%)
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
+ ++ LSG+ N + + D+G+ L L KL L L +T L + L S
Sbjct: 85 EESLQHLSGIPNTTKATFNGPGIDDAGMENLTSLPKLKYLTLADTAITDETLKTAGKLDS 144
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
+ L L R ++D+G E + + L+ ++L I D + L + L + L+ +
Sbjct: 145 VQGLFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDSLAKIKTLIDVQLEKSKVT 204
Query: 290 DEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
DEGLV L L LK + + T + ++ L LE + ++ I+D S+ +L GLS
Sbjct: 205 DEGLVKLAPLP-LKSINFNYCTTINGPTMKMLGQTPTLEYLQGDYSKINDASMAELKGLS 263
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI----- 403
LK L + +T G+ + L +L + + D G + + ++I
Sbjct: 264 KLKRLRIRGCDVTGEGIQHIAGNKALARFELRDSSVDDDGLKVISQLPAVTYVDISECRL 323
Query: 404 -CGGGLTDAG-LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
G+ G LTGL L + ++ L L NL L L+S VT
Sbjct: 324 ASPEGIAQLGKLTGLTYLGLWETKTNDETLAGFGDLVNLEELNLKSTAVT 373
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 120/270 (44%), Gaps = 21/270 (7%)
Query: 192 VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI 251
V + IA KG + +L +L G P T N + D G E + +
Sbjct: 72 VVEFSIANQKGGIEESLQHLSGIPNTTKA-------------TFNGPGIDDAGMENLTSL 118
Query: 252 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ 311
LK L L ITDE L L +++ L L G+ DEGL LTGL L+ ++L +T
Sbjct: 119 PKLKYLTLADTAITDETLKTAGKLDSVQGLFLRRTGVTDEGLELLTGLSKLRAIDLRNTN 178
Query: 312 VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTS 370
+G +G+ L+ + L + L + ++D L KLA L LKS+N + I + L
Sbjct: 179 IGDAGMDSLAKIKTLIDVQLEKSKVTDEGLVKLAPL-PLKSINFNYCTTINGPTMKMLGQ 237
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL------TGLVSLNVSNS 424
L +L ++I D+ A L+ L+ L I G +T G+ L + +S
Sbjct: 238 TPTLEYLQGDYSKINDASMAELKGLSKLKRLRIRGCDVTGEGIQHIAGNKALARFELRDS 297
Query: 425 RITSAGLRHLKPLKNLRSLTLESCKVTAND 454
+ GL+ + L + + + C++ + +
Sbjct: 298 SVDDDGLKVISQLPAVTYVDISECRLASPE 327
>gi|440717669|ref|ZP_20898151.1| hypothetical protein RBSWK_05211 [Rhodopirellula baltica SWK14]
gi|436437289|gb|ELP30945.1| hypothetical protein RBSWK_05211 [Rhodopirellula baltica SWK14]
Length = 442
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 157/322 (48%), Gaps = 33/322 (10%)
Query: 42 PGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQ--ISDGGL 99
PG++D M+ + S ++L + L+ + +TD LK + SLD F + ++D GL
Sbjct: 105 PGIDDAGMENLKSL-ANLKRLTLADTAITDQ---TLKTVGEMTSLDALFLRRTGVTDEGL 160
Query: 100 EHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES 159
E L GLS L ++ R N I GM + A + L+ + LE+ GLV L L L+S
Sbjct: 161 ELLTGLSKLRAIDLRNTN-IGDAGMDSLAKIKTLIDVKLEKSKVTDEGLVKLAPL-PLKS 218
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
+N +C I MK L L++LQ SK+ D+ +A LKGL KL L + GC VT
Sbjct: 219 INFNYCTTINGPTMKMLGQTPTLENLQGDYSKINDASMAELKGLSKLKRLRIRGCDVTGE 278
Query: 220 ------------------------CLDSLSALGSLFYLNLNRCQL-SDDGCEKFSKIGSL 254
L +S L ++ +++++ C+L S +G + K+ L
Sbjct: 279 GIQHIAGNKALARFELRDSSVDDDGLKVISQLPAVTHVDISECRLASPEGIAQLGKLIGL 338
Query: 255 KVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS 314
L L + DE L L NLE LNL S + DE L L + LK L ++ TQ+G
Sbjct: 339 TYLGLWETKTNDETLAGFGDLVNLEELNLKSTAVTDESLPVLMKMTKLKTLNVAGTQLGD 398
Query: 315 SGLRHLSGLTNLESINLSFTGI 336
L+ L NL+S+N++ T I
Sbjct: 399 DSFLELAKLPNLKSMNVANTSI 420
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 176/395 (44%), Gaps = 44/395 (11%)
Query: 69 VTDSGLIHLKDCS-NLQSLDFNFCIQISDGGLE----HLRGLSNLTSLSFRRNNAITAQG 123
+T++G I KD N+ F I GG+E HL G+ N T +F I G
Sbjct: 57 LTEAGYILTKDDDGNV----VEFSIANQKGGIEESLQHLSGIPNTTEATFN-GPGIDDAG 111
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
M+ L NL +L L ITD +K + +T+L
Sbjct: 112 MENLKSLANLKRLTLADT-------------------------AITDQTLKTVGEMTSLD 146
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
+L + + VTD G+ L GL KL ++L + A +DSL+ + +L + L + +++D+
Sbjct: 147 ALFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDSLAKIKTLIDVKLEKSKVTDE 206
Query: 244 GCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNL 302
G K + + LK +N + I + L LE+L D I D + L GL L
Sbjct: 207 GLVKLAPL-PLKSINFNYCTTINGPTMKMLGQTPTLENLQGDYSKINDASMAELKGLSKL 265
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL-DARQIT 361
K L + V G++H++G L L + + D L+ ++ L ++ +++ + R +
Sbjct: 266 KRLRIRGCDVTGEGIQHIAGNKALARFELRDSSVDDDGLKVISQLPAVTHVDISECRLAS 325
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL------TG 415
G+A L L GLT+L L+ + D A + NL L + +TD L T
Sbjct: 326 PEGIAQLGKLIGLTYLGLWETKTNDETLAGFGDLVNLEELNLKSTAVTDESLPVLMKMTK 385
Query: 416 LVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
L +LNV+ +++ L L NL+S+ + + +
Sbjct: 386 LKTLNVAGTQLGDDSFLELAKLPNLKSMNVANTSI 420
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
+E L HL G+ N + GI D G+ NL L NLK L L+DT + L+ + +T+
Sbjct: 85 EESLQHLSGIPNTTEATFNGPGIDDAGMENLKSLANLKRLTLADTAITDQTLKTVGEMTS 144
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L+++ L TG++D L L GLS L++++L I D G+ +L + L + L +++T
Sbjct: 145 LDALFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDSLAKIKTLIDVKLEKSKVT 204
Query: 386 DSGAAYLRNFKNLRSLE------ICGGGLTDAGLTG-LVSLNVSNSRITSAGLRHLKPLK 438
D G L L+S+ I G + G T L +L S+I A + LK L
Sbjct: 205 DEGLVKLAPLP-LKSINFNYCTTINGPTMKMLGQTPTLENLQGDYSKINDASMAELKGLS 263
Query: 439 NLRSLTLESCKVTANDIKRL 458
L+ L + C VT I+ +
Sbjct: 264 KLKRLRIRGCDVTGEGIQHI 283
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 21/270 (7%)
Query: 192 VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI 251
V + IA KG + +L +L G P T N + D G E +
Sbjct: 72 VVEFSIANQKGGIEESLQHLSGIPNTTEA-------------TFNGPGIDDAGMENLKSL 118
Query: 252 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ 311
+LK L L ITD+ L + +T+L++L L G+ DEGL LTGL L+ ++L +T
Sbjct: 119 ANLKRLTLADTAITDQTLKTVGEMTSLDALFLRRTGVTDEGLELLTGLSKLRAIDLRNTN 178
Query: 312 VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTS 370
+G +G+ L+ + L + L + ++D L KLA L LKS+N + I + L
Sbjct: 179 IGDAGMDSLAKIKTLIDVKLEKSKVTDEGLVKLAPL-PLKSINFNYCTTINGPTMKMLGQ 237
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL------TGLVSLNVSNS 424
L +L ++I D+ A L+ L+ L I G +T G+ L + +S
Sbjct: 238 TPTLENLQGDYSKINDASMAELKGLSKLKRLRIRGCDVTGEGIQHIAGNKALARFELRDS 297
Query: 425 RITSAGLRHLKPLKNLRSLTLESCKVTAND 454
+ GL+ + L + + + C++ + +
Sbjct: 298 SVDDDGLKVISQLPAVTHVDISECRLASPE 327
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 127/290 (43%), Gaps = 9/290 (3%)
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
+ ++ LSG+ N + + D+G+ LK L L L L +T L ++ + S
Sbjct: 85 EESLQHLSGIPNTTEATFNGPGIDDAGMENLKSLANLKRLTLADTAITDQTLKTVGEMTS 144
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L L L R ++D+G E + + L+ ++L I D + L + L + L+ +
Sbjct: 145 LDALFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDSLAKIKTLIDVKLEKSKVT 204
Query: 290 DEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
DEGLV L L LK + + T + ++ L LE++ ++ I+D S+ +L GLS
Sbjct: 205 DEGLVKLAPLP-LKSINFNYCTTINGPTMKMLGQTPTLENLQGDYSKINDASMAELKGLS 263
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI----- 403
LK L + +T G+ + L +L + + D G + + ++I
Sbjct: 264 KLKRLRIRGCDVTGEGIQHIAGNKALARFELRDSSVDDDGLKVISQLPAVTHVDISECRL 323
Query: 404 -CGGGLTDAG-LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
G+ G L GL L + ++ L L NL L L+S VT
Sbjct: 324 ASPEGIAQLGKLIGLTYLGLWETKTNDETLAGFGDLVNLEELNLKSTAVT 373
>gi|290973212|ref|XP_002669343.1| predicted protein [Naegleria gruberi]
gi|284082889|gb|EFC36599.1| predicted protein [Naegleria gruberi]
Length = 440
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 164/327 (50%), Gaps = 12/327 (3%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
+ + +L SLNI + N I D ++K +S + L SL I ++V D G YL +++LT LN
Sbjct: 115 ISAMKQLTSLNI-YDNGIGDEEIKYISEMKQLTSLNIGYNRVGDEGAKYLSEMKQLTSLN 173
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
+ V LS + L LN+ ++ +G + S++ L LN+ NE+++E
Sbjct: 174 IGYNRVGIEGAKYLSEMEQLTSLNIGYSRIGIEGVKYISEMKQLTSLNISKNEVSNEGAK 233
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
+L + L LN+ IGDEG+ L+ + L L + ++G G++ +S + L S++
Sbjct: 234 YLSEMKQLRLLNIYHNEIGDEGVKYLSEMKQLTSLHIGYNRIGLEGVKLISEMEQLTSLD 293
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
+S ISD + L+ + L SLN+D +I G+ ++ + LT L + RI GA
Sbjct: 294 ISENEISDEGAKYLSEMEQLTSLNIDYSRIGLEGVKYISEMKQLTSLTIAYNRIGIKGAK 353
Query: 391 YLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
+ K LR L+I ++D G + L+SL +S I G++++ +K LR L
Sbjct: 354 LISEMKQLRLLDISNNEISDEGAKYLSEMKQLISLYISEIGIGIKGVKYISEMKQLRLLD 413
Query: 445 LESCKVTANDIKRLQSRDLPNLVSFRP 471
+T N I + ++ L + P
Sbjct: 414 -----ITRNRIGKEGAKLLSEMKQLTP 435
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 156/299 (52%), Gaps = 7/299 (2%)
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
+ +L SLNI + N + D K LS + L SL I ++V G YL +++LT LN+
Sbjct: 142 MKQLTSLNIGY-NRVGDEGAKYLSEMKQLTSLNIGYNRVGIEGAKYLSEMEQLTSLNIGY 200
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
+ + +S + L LN+++ ++S++G + S++ L++LN+ NEI DE + +L
Sbjct: 201 SRIGIEGVKYISEMKQLTSLNISKNEVSNEGAKYLSEMKQLRLLNIYHNEIGDEGVKYLS 260
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
+ L SL++ IG EG+ ++ + L L++S+ ++ G ++LS + L S+N+ +
Sbjct: 261 EMKQLTSLHIGYNRIGLEGVKLISEMEQLTSLDISENEISDEGAKYLSEMEQLTSLNIDY 320
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
+ I ++ ++ + L SL + +I G ++ + L LD+ I+D GA YL
Sbjct: 321 SRIGLEGVKYISEMKQLTSLTIAYNRIGIKGAKLISEMKQLRLLDISNNEISDEGAKYLS 380
Query: 394 NFKNLRSLEICGGGLTDAGLTGLVS------LNVSNSRITSAGLRHLKPLKNLRSLTLE 446
K L SL I G+ G+ + L+++ +RI G + L +K L L LE
Sbjct: 381 EMKQLISLYISEIGIGIKGVKYISEMKQLRLLDITRNRIGKEGAKLLSEMKQLTPLCLE 439
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 111/228 (48%), Gaps = 6/228 (2%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L S+++S ++V++ G +L + L+ L+ + +I D G+++L + LTSL
Sbjct: 212 SEMKQLTSLNISKNEVSNEGAKYLSEMKQLRLLNI-YHNEIGDEGVKYLSEMKQLTSLHI 270
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
N I +G+K + + L LD+ G L + +L SLNI + I +
Sbjct: 271 GYNR-IGLEGVKLISEMEQLTSLDISENEISDEGAKYLSEMEQLTSLNIDYSR-IGLEGV 328
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K +S + L SL I+ +++ G + +++L LL++ ++ LS + L L
Sbjct: 329 KYISEMKQLTSLTIAYNRIGIKGAKLISEMKQLRLLDISNNEISDEGAKYLSEMKQLISL 388
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE---CLVHLKGLTNL 278
++ + G + S++ L++L++ N I E L +K LT L
Sbjct: 389 YISEIGIGIKGVKYISEMKQLRLLDITRNRIGKEGAKLLSEMKQLTPL 436
>gi|290973802|ref|XP_002669636.1| predicted protein [Naegleria gruberi]
gi|284083186|gb|EFC36892.1| predicted protein [Naegleria gruberi]
Length = 548
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 203/439 (46%), Gaps = 26/439 (5%)
Query: 46 DKWMDVIAS---QGSSLLSVDLSGSDVTDS--GLIHLKDCSNLQSLDFNFCI-QISDGGL 99
+KW D I + +LS+ + G ++ + G I K NL LD C +I +
Sbjct: 76 EKWTDFIERSNLEMDKVLSLTIDGVELIEEQCGTISTK-LVNLTQLDL--CRNKIKPTVV 132
Query: 100 EHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES 159
+ L L+NL L+ +N I G K + L +L LDL G L L L
Sbjct: 133 KGLSSLTNLKKLNLG-HNEIGNDGAKHVSSLTHLTALDLFDNGIGPNGAQRLSSLTNLTQ 191
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
LN+ N I D+ + +S LTNL L + +K+ +G+ L+GL+KLT L+L G +
Sbjct: 192 LNL-GNNEIGDAGAEHISSLTNLTQLNLRITKLGANGVKSLRGLKKLTELDLSGNQIGYE 250
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
+++LS L +L LNL +++ DG E+ + +L L+L HL L NL
Sbjct: 251 GVNNLSELKNLKKLNLGNNRITGDGAERLCGLENLTELDLRAE--------HLSQLKNLT 302
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
+NL IG G L L NL L L +G+ L L NL ++L + I D
Sbjct: 303 QINLCLNQIGPNGAERLCELTNLTQLNLRSNLIGAIKAESLCKLENLTQLDLGYNRIEDD 362
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
++L+ L L L+L QI G +L+ LT LTHLDL G I D GA +L K L
Sbjct: 363 GAQRLSKLKKLTQLDLSGNQIGSIGAQSLSELTNLTHLDLNGNGIED-GAQHLSKLKKLT 421
Query: 400 SLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAN 453
L + + D G L L L++ N+ I G L LKN+ L+L+ ++
Sbjct: 422 RLGLNDNRIGDDGAKYLSELNKLTHLSLDNNGIGDTGAECLSKLKNITYLSLDDNEIETA 481
Query: 454 DIKRLQSRDLPNLVSFRPE 472
K L+ L S R E
Sbjct: 482 GKKHLRKLIRCGLCSIRTE 500
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 164/363 (45%), Gaps = 47/363 (12%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI 92
L+ L LG ND V S + L ++DL + + +G L +NL L+
Sbjct: 141 LKKLNLGHNEIGNDGAKHV--SSLTHLTALDLFDNGIGPNGAQRLSSLTNLTQLNLGNN- 197
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
+I D G EH+ L+NLT L+ R + A G+K+ GL L +LDL + G+ NL
Sbjct: 198 EIGDAGAEHISSLTNLTQLNLRIT-KLGANGVKSLRGLKKLTELDLSGNQIGYEGVNNLS 256
Query: 153 GLMKLESLNI-----------KWCNC--ITDSDMKP--LSGLTNLKSLQISCSKVTDSGI 197
L L+ LN+ + C +T+ D++ LS L NL + + +++ +G
Sbjct: 257 ELKNLKKLNLGNNRITGDGAERLCGLENLTELDLRAEHLSQLKNLTQINLCLNQIGPNGA 316
Query: 198 AYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
L L LT LNL + A +SL L +L L+L ++ DDG ++ SK+ L L
Sbjct: 317 ERLCELTNLTQLNLRSNLIGAIKAESLCKLENLTQLDLGYNRIEDDGAQRLSKLKKLTQL 376
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSCG-----------------------IGDEGLV 294
+L N+I L LTNL L+L+ G IGD+G
Sbjct: 377 DLSGNQIGSIGAQSLSELTNLTHLDLNGNGIEDGAQHLSKLKKLTRLGLNDNRIGDDGAK 436
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG---SLRKLA--GLSS 349
L+ L L L L + +G +G LS L N+ ++L I LRKL GL S
Sbjct: 437 YLSELNKLTHLSLDNNGIGDTGAECLSKLKNITYLSLDDNEIETAGKKHLRKLIRCGLCS 496
Query: 350 LKS 352
+++
Sbjct: 497 IRT 499
>gi|325182005|emb|CCA16458.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 708
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 134/423 (31%), Positives = 199/423 (47%), Gaps = 40/423 (9%)
Query: 59 LLSVDLSGSD-VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
L+S++L+G +TD L L+ LQ+L + C I++ GL+HL GL L L R
Sbjct: 313 LISLNLTGCRLITDKTLYSLRHLFRLQNLHLSGCKWITEKGLQHLNGLFGLKRLYLARCV 372
Query: 118 AITAQGMKAFA-GLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
++ Q + F NLV+LDL C+ L L ++ SL +K C+ IT + L
Sbjct: 373 NVSNQAFRFFPTSFPNLVELDLSHCSISDIALHFTGRLREIHSLMLKGCSRITTKGLSHL 432
Query: 177 SGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L+ L+ L + C V +G++ K +L +L L A L+ + +L L+L
Sbjct: 433 GSLSKLRRLDVRYCKHV--AGLS--KEWTQLDMLKLACTEFKEADASILATMKTLHELDL 488
Query: 236 NRCQLSDDGCEKF-SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
RC L GC F S + SL L + +TDE L+ L +LE L +
Sbjct: 489 -RCCLVAKGCFSFVSHLNSLVRLCVAETALTDESLIML--CKSLEKLQM----------- 534
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
L++S T+V SG + L L ++L GI++ SL ++ L L LN
Sbjct: 535 ----------LDVSCTEVTDSGTMEIEMLGELSELHLDTPGITNRSLERVGKLKKLARLN 584
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL------EICGGGL 408
L A +TD G+ AL L L LD+ + G L K LRSL EI +
Sbjct: 585 LFAASVTDEGVEALKRLDKLQDLDICSGGVGHRGVKALSQLKRLRSLNLSQNKEIRSQSV 644
Query: 409 TD-AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLV 467
LT L LN+SN+ ITS+ L +L LK L SL++ + ++ I LQ +LP+L
Sbjct: 645 VHLEALTKLRFLNLSNTGITSSCLHNLFALKELESLSVYGVVLESSQIDELQE-NLPHLK 703
Query: 468 SFR 470
R
Sbjct: 704 VLR 706
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 196/426 (46%), Gaps = 43/426 (10%)
Query: 67 SDVTDSGLIHLKD--CSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
SDV DS L L +QSLDF++C ++ GL+ L NL +F + + +
Sbjct: 245 SDVDDSWLEALPTHAIEQIQSLDFSYCHRLQFCGLKPQSRLPNLRVANFEGCLYLKPETI 304
Query: 125 KAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+ L+ L+L C I L +L+ L +L++L++ C IT+ ++ L+GL LK
Sbjct: 305 QRLGFSNRLISLNLTGCRLITDKTLYSLRHLFRLQNLHLSGCKWITEKGLQHLNGLFGLK 364
Query: 184 SLQIS---------------------------CSKVTDSGIAYLKGLQKLTLLNLEGCP- 215
L ++ CS ++D + + L+++ L L+GC
Sbjct: 365 RLYLARCVNVSNQAFRFFPTSFPNLVELDLSHCS-ISDIALHFTGRLREIHSLMLKGCSR 423
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
+T L L +L L L++ C+ ++++++ LK+ F E L +K
Sbjct: 424 ITTKGLSHLGSLSKLRRLDVRYCKHVAGLSKEWTQLDMLKLACTEFKEADASILATMK-- 481
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL-SGLTNLESINLSFT 334
L L+L C + ++ L +L L +++T + L L L L+ +++S T
Sbjct: 482 -TLHELDLRCCLVAKGCFSFVSHLNSLVRLCVAETALTDESLIMLCKSLEKLQMLDVSCT 540
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
++D ++ L L L+LD IT+ L + L L L+LF A +TD G L+
Sbjct: 541 EVTDSGTMEIEMLGELSELHLDTPGITNRSLERVGKLKKLARLNLFAASVTDEGVEALKR 600
Query: 395 FKNLRSLEICGGGLTDAGLTGLV------SLNVS-NSRITSAGLRHLKPLKNLRSLTLES 447
L+ L+IC GG+ G+ L SLN+S N I S + HL+ L LR L L +
Sbjct: 601 LDKLQDLDICSGGVGHRGVKALSQLKRLRSLNLSQNKEIRSQSVVHLEALTKLRFLNLSN 660
Query: 448 CKVTAN 453
+T++
Sbjct: 661 TGITSS 666
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 5/207 (2%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC 91
+L LC+ + + D+ + ++ L +D+S ++VTDSG + ++ L L +
Sbjct: 506 SLVRLCVAE-TALTDESLIMLCKSLEKLQMLDVSCTEVTDSGTMEIEMLGELSELHLD-T 563
Query: 92 IQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL 151
I++ LE + L L L+ ++T +G++A L L LD+ H G+ L
Sbjct: 564 PGITNRSLERVGKLKKLARLNLF-AASVTDEGVEALKRLDKLQDLDICSGGVGHRGVKAL 622
Query: 152 KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
L +L SLN+ I + L LT L+ L +S + +T S + L L++L L++
Sbjct: 623 SQLKRLRSLNLSQNKEIRSQSVVHLEALTKLRFLNLSNTGITSSCLHNLFALKELESLSV 682
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRC 238
G + ++ +D L +L +L + RC
Sbjct: 683 YGVVLESSQIDELQE--NLPHLKVLRC 707
>gi|406830574|ref|ZP_11090168.1| hypothetical protein SpalD1_03019 [Schlesneria paludicola DSM
18645]
Length = 404
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 145/292 (49%), Gaps = 18/292 (6%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
TD+D+ L L+SL +S ++++ GIA L L+ LT+L+L PV A L L
Sbjct: 63 FTDADVTLLKTFPELESLDLSGTQISGKGIAELSVLRSLTVLHLANLPVKNAQFKKLIEL 122
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
SL L++ Q+SD + +L L L N IT+ L L L L+L
Sbjct: 123 DSLTTLDVADTQVSDAALQGSIAHPNLTTLVLSGNRITNAGLNDLSKFGQLAILDLTQTR 182
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
+ DEG+ L L NL L LS + +GL + GL++L+ ++L+ T I+D L+ L GL
Sbjct: 183 VSDEGMTALKRLENLTELRLSGNVITDTGLEAIGGLSHLKILDLTATQITDAGLKHLRGL 242
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGG 407
++L L L Q+ D G+ AL + L LD + +ITD + L NL +L++
Sbjct: 243 NNLNELKLGRNQVKDNGVNALVEIPTLIALDFYATQITDECLSALGQIANLTTLDL---- 298
Query: 408 LTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
+ I+ GLR+L L+NL+ + L VTA+ +KR Q
Sbjct: 299 --------------GKNPISDFGLRNLTRLRNLKEIGLVEAPVTASGLKRFQ 336
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 136/257 (52%), Gaps = 5/257 (1%)
Query: 142 TRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYL 200
T+I G G+ L L L L++ + ++ K L L +L +L ++ ++V+D+ +
Sbjct: 85 TQISGKGIAELSVLRSLTVLHLANL-PVKNAQFKKLIELDSLTTLDVADTQVSDAALQGS 143
Query: 201 KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG 260
LT L L G +T A L+ LS G L L+L + ++SD+G ++ +L L L
Sbjct: 144 IAHPNLTTLVLSGNRITNAGLNDLSKFGQLAILDLTQTRVSDEGMTALKRLENLTELRLS 203
Query: 261 FNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
N ITD L + GL++L+ L+L + I D GL +L GL NL L+L QV +G+ L
Sbjct: 204 GNVITDTGLEAIGGLSHLKILDLTATQITDAGLKHLRGLNNLNELKLGRNQVKDNGVNAL 263
Query: 321 SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
+ L +++ T I+D L L +++L +L+L I+D GL LT L L + L
Sbjct: 264 VEIPTLIALDFYATQITDECLSALGQIANLTTLDLGKNPISDFGLRNLTRLRNLKEIGLV 323
Query: 381 GARITDSGAAYLRNFKN 397
A +T SG L+ F++
Sbjct: 324 EAPVTASG---LKRFQD 337
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 8/214 (3%)
Query: 262 NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS 321
E TD + LK LESL+L I +G+ L+ L +L L L++ V ++ + L
Sbjct: 61 QEFTDADVTLLKTFPELESLDLSGTQISGKGIAELSVLRSLTVLHLANLPVKNAQFKKLI 120
Query: 322 GLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG 381
L +L +++++ T +SD +L+ +L +L L +IT+ GL L+ L LDL
Sbjct: 121 ELDSLTTLDVADTQVSDAALQGSIAHPNLTTLVLSGNRITNAGLNDLSKFGQLAILDLTQ 180
Query: 382 ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG------LVSLNVSNSRITSAGLRHLK 435
R++D G L+ +NL L + G +TD GL L L+++ ++IT AGL+HL+
Sbjct: 181 TRVSDEGMTALKRLENLTELRLSGNVITDTGLEAIGGLSHLKILDLTATQITDAGLKHLR 240
Query: 436 PLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSF 469
L NL L L +V N + L ++P L++
Sbjct: 241 GLNNLNELKLGRNQVKDNGVNALV--EIPTLIAL 272
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 150/337 (44%), Gaps = 28/337 (8%)
Query: 30 DCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVD-LSGSDVTDSGLIHLKDCSNLQSLDF 88
D QD + + + K + S ++ +D + TD+ + LK L+SLD
Sbjct: 23 DDVTQDTAIQRIEALGGKVVRNQERPSSPVVQIDCRDAQEFTDADVTLLKTFPELESLDL 82
Query: 89 NFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGL 148
+ QIS G+ L L +LT L AQ K L
Sbjct: 83 S-GTQISGKGIAELSVLRSLTVLHLANLPVKNAQFKK----------------------L 119
Query: 149 VNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTL 208
+ L L L+ + + ++D+ ++ NL +L +S +++T++G+ L +L +
Sbjct: 120 IELDSLTTLDVADTQ----VSDAALQGSIAHPNLTTLVLSGNRITNAGLNDLSKFGQLAI 175
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
L+L V+ + +L L +L L L+ ++D G E + LK+L+L +ITD
Sbjct: 176 LDLTQTRVSDEGMTALKRLENLTELRLSGNVITDTGLEAIGGLSHLKILDLTATQITDAG 235
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
L HL+GL NL L L + D G+ L + L L+ TQ+ L L + NL +
Sbjct: 236 LKHLRGLNNLNELKLGRNQVKDNGVNALVEIPTLIALDFYATQITDECLSALGQIANLTT 295
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL 365
++L ISD LR L L +LK + L +T +GL
Sbjct: 296 LDLGKNPISDFGLRNLTRLRNLKEIGLVEAPVTASGL 332
>gi|188586163|ref|YP_001917708.1| hypothetical protein Nther_1542 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350850|gb|ACB85120.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 344
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 164/318 (51%), Gaps = 19/318 (5%)
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
NLK +K E L ++ IT+ +++ L+ LT +S + GI Y LQ+L+L
Sbjct: 38 NLKAAIK-EELGVE---QITEENIEDLTTLT------VSGEDINIKGIEYAINLQELSL- 86
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
+G + +++L+ + +L LNLN +++D+G E+ ++ +LK ++L ++TDE
Sbjct: 87 --QGTKI--EDVNTLAEVDNLEELNLNYTEITDEGIEQLAEADNLKQISLTHTDVTDEGT 142
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
L +LE L L + D+GL +L NLK L+L T V G HL+ NLE +
Sbjct: 143 KLLAESESLERLILSGTEVTDDGLEHLIEADNLKKLDLHGTDVTDDGAEHLAETDNLEKL 202
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGA 389
+L T ++D + +L + +L+ L L ++TD G+ L L L L G IT+ G
Sbjct: 203 SLVDTEVTDEGIEQLVKVDNLEVLILGWTEVTDNGVEYLAEADNLEMLHLDGTEITNEGV 262
Query: 390 AYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
YL NL L++ +TD A L L++ ++ +T G++ L +L+ + L
Sbjct: 263 KYLAEADNLEELDLKQTKVTDVNALAETDSLEELDLWDTDVTDEGVKELAEADSLKVVNL 322
Query: 446 ESCKVTANDIKRLQSRDL 463
+ +VT ++ L+ D+
Sbjct: 323 DETEVTNEGVEHLEDEDI 340
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 128/241 (53%), Gaps = 7/241 (2%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI 92
L++L L Y + D+ ++ +A + +L + L+ +DVTD G L + +L+ L +
Sbjct: 103 LEELNLN-YTEITDEGIEQLA-EADNLKQISLTHTDVTDEGTKLLAESESLERLILSGT- 159
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
+++D GLEHL NL L + +T G + A NL KL L G+ L
Sbjct: 160 EVTDDGLEHLIEADNLKKLDLHGTD-VTDDGAEHLAETDNLEKLSLVDTEVTDEGIEQLV 218
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
+ LE L + W +TD+ ++ L+ NL+ L + +++T+ G+ YL L L+L+
Sbjct: 219 KVDNLEVLILGWTE-VTDNGVEYLAEADNLEMLHLDGTEITNEGVKYLAEADNLEELDLK 277
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
VT +++L+ SL L+L ++D+G ++ ++ SLKV+NL E+T+E + HL
Sbjct: 278 QTKVTD--VNALAETDSLEELDLWDTDVTDEGVKELAEADSLKVVNLDETEVTNEGVEHL 335
Query: 273 K 273
+
Sbjct: 336 E 336
>gi|297803756|ref|XP_002869762.1| hypothetical protein ARALYDRAFT_492485 [Arabidopsis lyrata subsp.
lyrata]
gi|297315598|gb|EFH46021.1| hypothetical protein ARALYDRAFT_492485 [Arabidopsis lyrata subsp.
lyrata]
Length = 590
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 137/456 (30%), Positives = 210/456 (46%), Gaps = 73/456 (16%)
Query: 58 SLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
S+ ++DL G S + + ++ NL SL+ + C +I+ L + GL++LT L R
Sbjct: 62 SVENIDLRGESSINAEWMAYIGGFVNLVSLNLSDCQRINSSTLWPITGLTSLTELDLSRC 121
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+T G+K ++NL KL + + G+ L L KL L++ +TD ++ L
Sbjct: 122 FKVTDAGIKHLQSVVNLKKLWISQTGVTKVGISLLASLQKLSLLDLGGLP-VTDHNLIAL 180
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA-------CLD------- 222
LT L+ L I S VT+ G + L+ LNL VT CL
Sbjct: 181 QELTKLEYLDIWGSNVTNQGAISILQFSNLSFLNLSWTSVTQTPNIPHLECLHMNMCTIV 240
Query: 223 ----SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
+ +L SL L L+ S + E S + L ++ + + ++ + NL
Sbjct: 241 SEPKTHCSLASLKKLVLSGANFSAE-TEALSFTNKSSITYLDVSKTSLQNFSFIETMINL 299
Query: 279 ESLNLDSCGIGDE--GLVNLTGLCNLKCLELSDTQVGSSGLRHLSG-LTNLESINLSFTG 335
E L+L S GD+ G V G NLK L +SDT++ S+G+ +L+G + LE+ +LS T
Sbjct: 300 EHLDLSSTAFGDDSVGFVACVG-ENLKNLNVSDTKITSAGVGNLAGHVPQLETFSLSQTF 358
Query: 336 ISD-----------------------------GSLRKLAGLSSLKSLNLDARQITDTGLA 366
+ D SL L L+SLK+L+L+ + DT L+
Sbjct: 359 VDDLSILLISTMMPCVKALDLGMTSIREEQAEPSLAALQSLTSLKTLSLEHPYLGDTALS 418
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRI 426
AL+SLTGLTHL L +TDS +L + N LVSL V ++ +
Sbjct: 419 ALSSLTGLTHLSLRSTSLTDSTLHHLSSLPN------------------LVSLGVRDAVL 460
Query: 427 TSAGLRHLKPLKNLRSLTLESCK-VTANDIKRLQSR 461
TS GL +P K LR+L L+ C +T +DI L R
Sbjct: 461 TSNGLEKFRPPKRLRTLDLKGCWLLTKDDIAGLCKR 496
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 203/433 (46%), Gaps = 78/433 (18%)
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGG-LVNLKGLMK 156
G +H ++ ++ R ++I A+ M G +NLV L+L C RI+ L + GL
Sbjct: 58 GFKH-----SVENIDLRGESSINAEWMAYIGGFVNLVSLNLSDCQRINSSTLWPITGLTS 112
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV 216
L L++ C +TD+ +K L + NLK L IS + VT GI+ L LQKL+LL+L G PV
Sbjct: 113 LTELDLSRCFKVTDAGIKHLQSVVNLKKLWISQTGVTKVGISLLASLQKLSLLDLGGLPV 172
Query: 217 TAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT 276
T L +L L L YL++ +++ G + +L LNL + +T +
Sbjct: 173 TDHNLIALQELTKLEYLDIWGSNVTNQGAISILQFSNLSFLNLSWTSVTQT-----PNIP 227
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELS------DTQ--------------VGSSG 316
+LE L+++ C I E + + L +LK L LS +T+ V +
Sbjct: 228 HLECLHMNMCTIVSEPKTHCS-LASLKKLVLSGANFSAETEALSFTNKSSITYLDVSKTS 286
Query: 317 LRHLS---GLTNLESINLSFTGISDGSLRKLAGL-SSLKSLNLDARQITDTGLAAL---- 368
L++ S + NLE ++LS T D S+ +A + +LK+LN+ +IT G+ L
Sbjct: 287 LQNFSFIETMINLEHLDLSSTAFGDDSVGFVACVGENLKNLNVSDTKITSAGVGNLAGHV 346
Query: 369 ----------------------TSLTGLTHLDLFGARITDSGA----AYLRNFKNLRSLE 402
T + + LDL I + A A L++ +L++L
Sbjct: 347 PQLETFSLSQTFVDDLSILLISTMMPCVKALDLGMTSIREEQAEPSLAALQSLTSLKTLS 406
Query: 403 ICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI- 455
+ L D + LTGL L++ ++ +T + L HL L NL SL + +T+N +
Sbjct: 407 LEHPYLGDTALSALSSLTGLTHLSLRSTSLTDSTLHHLSSLPNLVSLGVRDAVLTSNGLE 466
Query: 456 -----KRLQSRDL 463
KRL++ DL
Sbjct: 467 KFRPPKRLRTLDL 479
>gi|421611905|ref|ZP_16053033.1| hypothetical protein RBSH_02839 [Rhodopirellula baltica SH28]
gi|408497310|gb|EKK01841.1| hypothetical protein RBSH_02839 [Rhodopirellula baltica SH28]
Length = 455
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 152/320 (47%), Gaps = 29/320 (9%)
Query: 42 PGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEH 101
PG++D M+ + S L + L+ + +TD L ++Q L F ++D GLE
Sbjct: 118 PGIDDAGMENLTSL-PKLKYLTLADTAITDETLKTAGKLDSVQGL-FLRRTGVTDEGLEL 175
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLN 161
L GLS L ++ R +N I GM + A + L + LE+ GLV L L L+S+N
Sbjct: 176 LTGLSKLRAIDLRNSN-IGDAGMDSLAKIKTLADVQLEKSKVTDEGLVKLTSL-PLKSIN 233
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA-- 219
+C I MK L L++LQ SK+ D +A LKGL KL L + GC VT
Sbjct: 234 FNYCTTINGPTMKMLGQTPTLENLQGDYSKINDESMAELKGLSKLKRLRIRGCDVTGEGI 293
Query: 220 ----------------------CLDSLSALGSLFYLNLNRCQL-SDDGCEKFSKIGSLKV 256
L +S L ++ Y++++ C+L S +G + ++ L
Sbjct: 294 QHIAGNKALARFELRDSSVDDDGLKVISQLPAVTYVDISECRLASPEGIAQLGELTGLTY 353
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
L L + DE L L NLE LNL S + DE L L + LK L ++ TQ+G
Sbjct: 354 LGLWETKTNDETLSGFGDLINLEELNLKSTSVTDESLPVLMKMIKLKTLNVAGTQLGDDS 413
Query: 317 LRHLSGLTNLESINLSFTGI 336
L+ L NL+S+N++ T I
Sbjct: 414 FLELAKLPNLKSMNVANTSI 433
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 163/352 (46%), Gaps = 10/352 (2%)
Query: 107 NLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCN 166
N+ S + ++ +G+ N K G+ NL L KL+ L +
Sbjct: 84 NVVEFSIANQKGGIEESLQHLSGIPNTTKATFNGPGIDDAGMENLTSLPKLKYLTLADT- 142
Query: 167 CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA 226
ITD +K L +++ L + + VTD G+ L GL KL ++L + A +DSL+
Sbjct: 143 AITDETLKTAGKLDSVQGLFLRRTGVTDEGLELLTGLSKLRAIDLRNSNIGDAGMDSLAK 202
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDS 285
+ +L + L + +++D+G K + + LK +N + I + L LE+L D
Sbjct: 203 IKTLADVQLEKSKVTDEGLVKLTSL-PLKSINFNYCTTINGPTMKMLGQTPTLENLQGDY 261
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
I DE + L GL LK L + V G++H++G L L + + D L+ ++
Sbjct: 262 SKINDESMAELKGLSKLKRLRIRGCDVTGEGIQHIAGNKALARFELRDSSVDDDGLKVIS 321
Query: 346 GLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
L ++ +++ + R + G+A L LTGLT+L L+ + D + + NL L +
Sbjct: 322 QLPAVTYVDISECRLASPEGIAQLGELTGLTYLGLWETKTNDETLSGFGDLINLEELNLK 381
Query: 405 GGGLTDAGLTGLV------SLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
+TD L L+ +LNV+ +++ L L NL+S+ + + +
Sbjct: 382 STSVTDESLPVLMKMIKLKTLNVAGTQLGDDSFLELAKLPNLKSMNVANTSI 433
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 129/290 (44%), Gaps = 9/290 (3%)
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
+ ++ LSG+ N + + D+G+ L L KL L L +T L + L S
Sbjct: 98 EESLQHLSGIPNTTKATFNGPGIDDAGMENLTSLPKLKYLTLADTAITDETLKTAGKLDS 157
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
+ L L R ++D+G E + + L+ ++L + I D + L + L + L+ +
Sbjct: 158 VQGLFLRRTGVTDEGLELLTGLSKLRAIDLRNSNIGDAGMDSLAKIKTLADVQLEKSKVT 217
Query: 290 DEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
DEGLV LT L LK + + T + ++ L LE++ ++ I+D S+ +L GLS
Sbjct: 218 DEGLVKLTSLP-LKSINFNYCTTINGPTMKMLGQTPTLENLQGDYSKINDESMAELKGLS 276
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI----- 403
LK L + +T G+ + L +L + + D G + + ++I
Sbjct: 277 KLKRLRIRGCDVTGEGIQHIAGNKALARFELRDSSVDDDGLKVISQLPAVTYVDISECRL 336
Query: 404 -CGGGLTDAG-LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
G+ G LTGL L + ++ L L NL L L+S VT
Sbjct: 337 ASPEGIAQLGELTGLTYLGLWETKTNDETLSGFGDLINLEELNLKSTSVT 386
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 8/200 (4%)
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
+E L HL G+ N + GI D G+ NLT L LK L L+DT + L+ L +
Sbjct: 98 EESLQHLSGIPNTTKATFNGPGIDDAGMENLTSLPKLKYLTLADTAITDETLKTAGKLDS 157
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
++ + L TG++D L L GLS L++++L I D G+ +L + L + L +++T
Sbjct: 158 VQGLFLRRTGVTDEGLELLTGLSKLRAIDLRNSNIGDAGMDSLAKIKTLADVQLEKSKVT 217
Query: 386 DSGAAYLRNFKNLRSLE------ICGGGLTDAGLTG-LVSLNVSNSRITSAGLRHLKPLK 438
D G L + L+S+ I G + G T L +L S+I + LK L
Sbjct: 218 DEGLVKLTSLP-LKSINFNYCTTINGPTMKMLGQTPTLENLQGDYSKINDESMAELKGLS 276
Query: 439 NLRSLTLESCKVTANDIKRL 458
L+ L + C VT I+ +
Sbjct: 277 KLKRLRIRGCDVTGEGIQHI 296
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 21/270 (7%)
Query: 192 VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI 251
V + IA KG + +L +L G P T N + D G E + +
Sbjct: 85 VVEFSIANQKGGIEESLQHLSGIPNTTKA-------------TFNGPGIDDAGMENLTSL 131
Query: 252 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ 311
LK L L ITDE L L +++ L L G+ DEGL LTGL L+ ++L ++
Sbjct: 132 PKLKYLTLADTAITDETLKTAGKLDSVQGLFLRRTGVTDEGLELLTGLSKLRAIDLRNSN 191
Query: 312 VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTS 370
+G +G+ L+ + L + L + ++D L KL L LKS+N + I + L
Sbjct: 192 IGDAGMDSLAKIKTLADVQLEKSKVTDEGLVKLTSL-PLKSINFNYCTTINGPTMKMLGQ 250
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL------TGLVSLNVSNS 424
L +L ++I D A L+ L+ L I G +T G+ L + +S
Sbjct: 251 TPTLENLQGDYSKINDESMAELKGLSKLKRLRIRGCDVTGEGIQHIAGNKALARFELRDS 310
Query: 425 RITSAGLRHLKPLKNLRSLTLESCKVTAND 454
+ GL+ + L + + + C++ + +
Sbjct: 311 SVDDDGLKVISQLPAVTYVDISECRLASPE 340
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 60/144 (41%), Gaps = 18/144 (12%)
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
L+HLSG+ N + GI D + L L LK L L ITD L L +
Sbjct: 101 LQHLSGIPNTTKATFNGPGIDDAGMENLTSLPKLKYLTLADTAITDETLKTAGKLDSVQG 160
Query: 377 LDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKP 436
L L +TD G L GL+ L ++++ NS I AG+ L
Sbjct: 161 LFLRRTGVTDEGLELL------------------TGLSKLRAIDLRNSNIGDAGMDSLAK 202
Query: 437 LKNLRSLTLESCKVTANDIKRLQS 460
+K L + LE KVT + +L S
Sbjct: 203 IKTLADVQLEKSKVTDEGLVKLTS 226
>gi|149175887|ref|ZP_01854505.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148845334|gb|EDL59679.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 360
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 119/219 (54%), Gaps = 1/219 (0%)
Query: 147 GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKL 206
GLV+LK +L+ L + W ++D + L L+ L L + + V+ SG+A+L+GL L
Sbjct: 128 GLVHLKRFHRLKRLML-WNTSVSDDGLVHLKELSQLNHLDLFYTPVSGSGLAHLQGLTNL 186
Query: 207 TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
T LNL+G VT A L ++ +L LNLN+ +SD G + L +L L ++T
Sbjct: 187 TWLNLQGTAVTNAGLKQVNCFSALRVLNLNQTSISDAGLVHLRDLPQLIILQLEQTQVTG 246
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
L L L L L L+ I D + +L L LEL DTQ+ +GL HLSGL L
Sbjct: 247 TGLSELSSLPKLYCLKLNGSLINDSSMSHLKSFKTLIRLELQDTQISDAGLVHLSGLPLL 306
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL 365
+++NLS T ++D L L GL LK++ L Q+T GL
Sbjct: 307 DALNLSGTQVTDAGLVYLQGLPRLKNVYLKNTQVTSEGL 345
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 134/237 (56%), Gaps = 12/237 (5%)
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
LS+ G + LK L L ++D+ LVHLK L+ L L+L + GL +L GL
Sbjct: 124 LSNTGLVHLKRFHRLKRLMLWNTSVSDDGLVHLKELSQLNHLDLFYTPVSGSGLAHLQGL 183
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 359
NL L L T V ++GL+ ++ + L +NL+ T ISD L L L L L L+ Q
Sbjct: 184 TNLTWLNLQGTAVTNAGLKQVNCFSALRVLNLNQTSISDAGLVHLRDLPQLIILQLEQTQ 243
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLV-- 417
+T TGL+ L+SL L L L G+ I DS ++L++FK L LE+ ++DAGL L
Sbjct: 244 VTGTGLSELSSLPKLYCLKLNGSLINDSSMSHLKSFKTLIRLELQDTQISDAGLVHLSGL 303
Query: 418 ----SLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKR-----LQSRD-LP 464
+LN+S +++T AGL +L+ L L+++ L++ +VT+ +++ QSRD LP
Sbjct: 304 PLLDALNLSGTQVTDAGLVYLQGLPRLKNVYLKNTQVTSEGLEQRKLILQQSRDPLP 360
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 129/258 (50%), Gaps = 27/258 (10%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
+ LSG ++++GL+HLK L+ L + +SD GL HL+ LS L
Sbjct: 117 ISLSGKGLSNTGLVHLKRFHRLKRLML-WNTSVSDDGLVHLKELSQLN------------ 163
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
LDL GL +L+GL L LN++ +T++ +K ++ +
Sbjct: 164 -------------HLDLFYTPVSGSGLAHLQGLTNLTWLNLQ-GTAVTNAGLKQVNCFSA 209
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
L+ L ++ + ++D+G+ +L+ L +L +L LE VT L LS+L L+ L LN ++
Sbjct: 210 LRVLNLNQTSISDAGLVHLRDLPQLIILQLEQTQVTGTGLSELSSLPKLYCLKLNGSLIN 269
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
D +L L L +I+D LVHL GL L++LNL + D GLV L GL
Sbjct: 270 DSSMSHLKSFKTLIRLELQDTQISDAGLVHLSGLPLLDALNLSGTQVTDAGLVYLQGLPR 329
Query: 302 LKCLELSDTQVGSSGLRH 319
LK + L +TQV S GL
Sbjct: 330 LKNVYLKNTQVTSEGLEQ 347
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 133/264 (50%), Gaps = 3/264 (1%)
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
+K ++ES+++ + DSD+ L+ NL+ + +S ++++G+ +LK +L L
Sbjct: 85 QMKSFDEVESISL---DVTQDSDLVWLNDFPNLERISLSGKGLSNTGLVHLKRFHRLKRL 141
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
L V+ L L L L +L+L +S G + +L LNL +T+ L
Sbjct: 142 MLWNTSVSDDGLVHLKELSQLNHLDLFYTPVSGSGLAHLQGLTNLTWLNLQGTAVTNAGL 201
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
+ + L LNL+ I D GLV+L L L L+L TQV +GL LS L L +
Sbjct: 202 KQVNCFSALRVLNLNQTSISDAGLVHLRDLPQLIILQLEQTQVTGTGLSELSSLPKLYCL 261
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGA 389
L+ + I+D S+ L +L L L QI+D GL L+ L L L+L G ++TD+G
Sbjct: 262 KLNGSLINDSSMSHLKSFKTLIRLELQDTQISDAGLVHLSGLPLLDALNLSGTQVTDAGL 321
Query: 390 AYLRNFKNLRSLEICGGGLTDAGL 413
YL+ L+++ + +T GL
Sbjct: 322 VYLQGLPRLKNVYLKNTQVTSEGL 345
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 3/191 (1%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
S L +DL + V+ SGL HL+ +NL L+ +++ GL+ + S L L+ +
Sbjct: 160 SQLNHLDLFYTPVSGSGLAHLQGLTNLTWLNLQ-GTAVTNAGLKQVNCFSALRVLNLNQ- 217
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+I+ G+ L L+ L LE+ GL L L KL L + + I DS M L
Sbjct: 218 TSISDAGLVHLRDLPQLIILQLEQTQVTGTGLSELSSLPKLYCLKLN-GSLINDSSMSHL 276
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
L L++ ++++D+G+ +L GL L LNL G VT A L L L L + L
Sbjct: 277 KSFKTLIRLELQDTQISDAGLVHLSGLPLLDALNLSGTQVTDAGLVYLQGLPRLKNVYLK 336
Query: 237 RCQLSDDGCEK 247
Q++ +G E+
Sbjct: 337 NTQVTSEGLEQ 347
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
S+L ++L+ + ++D+GL+HL+D L L Q++ GL L L L L
Sbjct: 208 SALRVLNLNQTSISDAGLVHLRDLPQLIILQLE-QTQVTGTGLSELSSLPKLYCLKL-NG 265
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+ I M L++L+L+ GLV+L GL L++LN+ +TD+ + L
Sbjct: 266 SLINDSSMSHLKSFKTLIRLELQDTQISDAGLVHLSGLPLLDALNLS-GTQVTDAGLVYL 324
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLK 201
GL LK++ + ++VT G+ K
Sbjct: 325 QGLPRLKNVYLKNTQVTSEGLEQRK 349
>gi|149177419|ref|ZP_01856023.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148843752|gb|EDL58111.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 375
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 154/285 (54%), Gaps = 3/285 (1%)
Query: 85 SLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI 144
+DF +I D L+ + GLS+L SL IT +++ + L LDL C+
Sbjct: 76 EVDFR-GTKIDDAALKEIAGLSHLRSL-LLNETPITDAALESVGKVTTLENLDLRNCSLN 133
Query: 145 HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQ 204
+ + L GL KL++L + + I D M ++ LTNLK+L + V+ G++ LK L
Sbjct: 134 NKAISYLTGLSKLKALRLSGNSDIDDDAMADINQLTNLKALMLDFLWVSGDGLSQLKDLN 193
Query: 205 KLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI 264
KL L L V L +L+ L L++ Q+SD+G F+KI L+ ++L N +
Sbjct: 194 KLEELYLAKTLVDDDGLATLTQFPKLKKTRLSQNQISDEGLAVFAKIPQLEEIDLSENSL 253
Query: 265 -TDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL 323
+D + HL GL L+ LNL G+ D G+ L GL +L+ L L +T++ ++GL++L +
Sbjct: 254 LSDAGMKHLSGLGKLKKLNLWRVGLTDAGVEPLQGLTSLEWLNLDNTRLTNAGLKYLKDM 313
Query: 324 TNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
LE ++L T +SD L+ L L+SLK L L +T+ G+A L
Sbjct: 314 QKLEFLHLGSTAVSDEGLKHLEPLTSLKELKLTRTAVTEKGVAEL 358
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 150/300 (50%), Gaps = 21/300 (7%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
I D+ +K ++GL++L+SL ++ + +TD+ + + + L L+L C + + L+ L
Sbjct: 84 IDDAALKEIAGLSHLRSLLLNETPITDAALESVGKVTTLENLDLRNCSLNNKAISYLTGL 143
Query: 228 GSLFYLNLN-RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC 286
L L L+ + DD +++ +LK L L F ++ + L LK L LE L L
Sbjct: 144 SKLKALRLSGNSDIDDDAMADINQLTNLKALMLDFLWVSGDGLSQLKDLNKLEELYLAKT 203
Query: 287 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI-SDGSLRKLA 345
+ D+GL LT LK LS Q+ GL + + LE I+LS + SD ++ L+
Sbjct: 204 LVDDDGLATLTQFPKLKKTRLSQNQISDEGLAVFAKIPQLEEIDLSENSLLSDAGMKHLS 263
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
GL LK LNL +TD G+ L LT L L+L R+T++G YL++ + L L +
Sbjct: 264 GLGKLKKLNLWRVGLTDAGVEPLQGLTSLEWLNLDNTRLTNAGLKYLKDMQKLEFLHLGS 323
Query: 406 GGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 465
++D GL+HL+PL +L+ L L VT + L+ + LPN
Sbjct: 324 TAVSD------------------EGLKHLEPLTSLKELKLTRTAVTEKGVAELKKK-LPN 364
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 151/309 (48%), Gaps = 19/309 (6%)
Query: 28 FRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLD 87
FR + D L + G+ S L S+ L+ + +TD+ L + + L++LD
Sbjct: 79 FRGTKIDDAALKEIAGL------------SHLRSLLLNETPITDAALESVGKVTTLENLD 126
Query: 88 FNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGG 147
C +++ + +L GLS L +L N+ I M L NL L L+ G
Sbjct: 127 LRNC-SLNNKAISYLTGLSKLKALRLSGNSDIDDDAMADINQLTNLKALMLDFLWVSGDG 185
Query: 148 LVNLKGLMKLESLNIKWCNCITDSD-MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKL 206
L LK L KLE L + + D D + L+ LK ++S ++++D G+A + +L
Sbjct: 186 LSQLKDLNKLEELYL--AKTLVDDDGLATLTQFPKLKKTRLSQNQISDEGLAVFAKIPQL 243
Query: 207 TLLNL-EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
++L E ++ A + LS LG L LNL R L+D G E + SL+ LNL +T
Sbjct: 244 EEIDLSENSLLSDAGMKHLSGLGKLKKLNLWRVGLTDAGVEPLQGLTSLEWLNLDNTRLT 303
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL-SGLT 324
+ L +LK + LE L+L S + DEGL +L L +LK L+L+ T V G+ L L
Sbjct: 304 NAGLKYLKDMQKLEFLHLGSTAVSDEGLKHLEPLTSLKELKLTRTAVTEKGVAELKKKLP 363
Query: 325 NLESINLSF 333
N E I L +
Sbjct: 364 NTE-IQLKY 371
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 122/265 (46%), Gaps = 32/265 (12%)
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
G + ++ ++ D ++ + + L+ L L ITD L + +T LE+L+L +C
Sbjct: 72 GYVIEVDFRGTKIDDAALKEIAGLSHLRSLLLNETPITDAALESVGKVTTLENLDLRNCS 131
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQ-------------------------VGSSGLRHLSG 322
+ ++ + LTGL LK L LS V GL L
Sbjct: 132 LNNKAISYLTGLSKLKALRLSGNSDIDDDAMADINQLTNLKALMLDFLWVSGDGLSQLKD 191
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF-G 381
L LE + L+ T + D L L LK L QI+D GLA + L +DL
Sbjct: 192 LNKLEELYLAKTLVDDDGLATLTQFPKLKKTRLSQNQISDEGLAVFAKIPQLEEIDLSEN 251
Query: 382 ARITDSGAAYLRNFKNLRSLEICGGGLTDA------GLTGLVSLNVSNSRITSAGLRHLK 435
+ ++D+G +L L+ L + GLTDA GLT L LN+ N+R+T+AGL++LK
Sbjct: 252 SLLSDAGMKHLSGLGKLKKLNLWRVGLTDAGVEPLQGLTSLEWLNLDNTRLTNAGLKYLK 311
Query: 436 PLKNLRSLTLESCKVTANDIKRLQS 460
++ L L L S V+ +K L+
Sbjct: 312 DMQKLEFLHLGSTAVSDEGLKHLEP 336
>gi|46447569|ref|YP_008934.1| hypothetical protein pc1935 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401210|emb|CAF24659.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 504
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 161/320 (50%), Gaps = 49/320 (15%)
Query: 83 LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT 142
+++L+F+ ++D L L+ NL +L FR+ +TA G+ L+ L LDL C
Sbjct: 227 IEALNFSNQAYLTDVHLLALKDCKNLKALYFRKCPNLTAAGLAYLRPLVALQHLDLNYCY 286
Query: 143 RI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS--CS-KVTDSGIA 198
+ GL +L L+ L+ LN+ +TD+ + LS LT L+ L +S C+ K+TD+G+A
Sbjct: 287 NLTDAGLAHLAPLVALKHLNLSGHGYLTDAGLAHLSPLTALQHLNLSECCNYKLTDAGLA 346
Query: 199 YLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
+L+ L L LNL C T A L L L +L +LNL+ C IG+
Sbjct: 347 HLRPLVALKYLNLSRCSKFTGAGLAHLRPLTALQHLNLSGC----------GGIGA---- 392
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSD-TQVGSSG 316
+ L HL+ LT L+ LNL CG+ D+ L +LT L L+ L+LS+ + +G
Sbjct: 393 -----GLASAGLAHLRPLTALQHLNLSWCGVTDDELAHLTPLEALQYLDLSNCWHLTDAG 447
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
L HL+ L L+ +NLS Q+T+ GLA L LT L H
Sbjct: 448 LAHLNPLIALQHLNLS-----------------------KCDQLTNAGLAHLIPLTALQH 484
Query: 377 LDLFG-ARITDSGAAYLRNF 395
L+L G + +TD G A LR F
Sbjct: 485 LNLSGCSNLTDDGLARLRPF 504
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 146/276 (52%), Gaps = 15/276 (5%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
K+E+LN +TD + L NLK+L C +T +G+AYL+ L L L+L C
Sbjct: 226 KIEALNFSNQAYLTDVHLLALKDCKNLKALYFRKCPNLTAAGLAYLRPLVALQHLDLNYC 285
Query: 215 P-VTAACLDSLSALGSLFYLNLN-RCQLSDDGCEKFSKIGSLKVLNLGF---NEITDECL 269
+T A L L+ L +L +LNL+ L+D G S + +L+ LNL ++TD L
Sbjct: 286 YNLTDAGLAHLAPLVALKHLNLSGHGYLTDAGLAHLSPLTALQHLNLSECCNYKLTDAGL 345
Query: 270 VHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELS-----DTQVGSSGLRHLSGL 323
HL+ L L+ LNL C GL +L L L+ L LS + S+GL HL L
Sbjct: 346 AHLRPLVALKYLNLSRCSKFTGAGLAHLRPLTALQHLNLSGCGGIGAGLASAGLAHLRPL 405
Query: 324 TNLESINLSFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGA 382
T L+ +NLS+ G++D L L L +L+ L+L + +TD GLA L L L HL+L
Sbjct: 406 TALQHLNLSWCGVTDDELAHLTPLEALQYLDLSNCWHLTDAGLAHLNPLIALQHLNLSKC 465
Query: 383 -RITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGL 416
++T++G A+L L+ L + G LTD GL L
Sbjct: 466 DQLTNAGLAHLIPLTALQHLNLSGCSNLTDDGLARL 501
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 38/289 (13%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD L+ LKDC NL++L F C ++ GL +LR
Sbjct: 238 LTDVHLLALKDCKNLKALYFRKCPNLTAAGLAYLR------------------------- 272
Query: 129 GLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L+ L LDL C + GL +L L+ L+ LN+ +TD+ + LS LT L+ L +
Sbjct: 273 PLVALQHLDLNYCYNLTDAGLAHLAPLVALKHLNLSGHGYLTDAGLAHLSPLTALQHLNL 332
Query: 188 S--CS-KVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC----- 238
S C+ K+TD+G+A+L+ L L LNL C T A L L L +L +LNL+ C
Sbjct: 333 SECCNYKLTDAGLAHLRPLVALKYLNLSRCSKFTGAGLAHLRPLTALQHLNLSGCGGIGA 392
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT 297
L+ G + +L+ LNL + +TD+ L HL L L+ L+L +C + D GL +L
Sbjct: 393 GLASAGLAHLRPLTALQHLNLSWCGVTDDELAHLTPLEALQYLDLSNCWHLTDAGLAHLN 452
Query: 298 GLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLS-FTGISDGSLRKL 344
L L+ L LS Q+ ++GL HL LT L+ +NLS + ++D L +L
Sbjct: 453 PLIALQHLNLSKCDQLTNAGLAHLIPLTALQHLNLSGCSNLTDDGLARL 501
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 144/286 (50%), Gaps = 33/286 (11%)
Query: 190 SKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QLSDDGCEK 247
+ +TD + LK + L L CP +TAA L L L +L +L+LN C L+D G
Sbjct: 236 AYLTDVHLLALKDCKNLKALYFRKCPNLTAAGLAYLRPLVALQHLDLNYCYNLTDAGLAH 295
Query: 248 FSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC---GIGDEGLVNLTGLCNLK 303
+ + +LK LNL G +TD L HL LT L+ LNL C + D GL +L L LK
Sbjct: 296 LAPLVALKHLNLSGHGYLTDAGLAHLSPLTALQHLNLSECCNYKLTDAGLAHLRPLVALK 355
Query: 304 CLELSD-TQVGSSGLRHLSGLTNLESINLSF-----TGISDGSLRKLAGLSSLKSLNLDA 357
L LS ++ +GL HL LT L+ +NLS G++ L L L++L+ LNL
Sbjct: 356 YLNLSRCSKFTGAGLAHLRPLTALQHLNLSGCGGIGAGLASAGLAHLRPLTALQHLNLSW 415
Query: 358 RQITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL 416
+TD LA LT L L +LDL +TD+G A+L L L
Sbjct: 416 CGVTDDELAHLTPLEALQYLDLSNCWHLTDAGLAHLN------------------PLIAL 457
Query: 417 VSLNVSN-SRITSAGLRHLKPLKNLRSLTLESC-KVTANDIKRLQS 460
LN+S ++T+AGL HL PL L+ L L C +T + + RL+
Sbjct: 458 QHLNLSKCDQLTNAGLAHLIPLTALQHLNLSGCSNLTDDGLARLRP 503
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 127/241 (52%), Gaps = 11/241 (4%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
++T +GL +L+ LQ LD N+C ++D GL HL L L L+ + +T G+
Sbjct: 261 PNLTAAGLAYLRPLVALQHLDLNYCYNLTDAGLAHLAPLVALKHLNLSGHGYLTDAGLAH 320
Query: 127 FAGLINLVKLDLERCTRIH---GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+ L L L+L C GL +L+ L+ L+ LN+ C+ T + + L LT L+
Sbjct: 321 LSPLTALQHLNLSECCNYKLTDAGLAHLRPLVALKYLNLSRCSKFTGAGLAHLRPLTALQ 380
Query: 184 SLQIS-CSKV----TDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
L +S C + +G+A+L+ L L LNL C VT L L+ L +L YL+L+ C
Sbjct: 381 HLNLSGCGGIGAGLASAGLAHLRPLTALQHLNLSWCGVTDDELAHLTPLEALQYLDLSNC 440
Query: 239 -QLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVN 295
L+D G + + +L+ LNL +++T+ L HL LT L+ LNL C + D+GL
Sbjct: 441 WHLTDAGLAHLNPLIALQHLNLSKCDQLTNAGLAHLIPLTALQHLNLSGCSNLTDDGLAR 500
Query: 296 L 296
L
Sbjct: 501 L 501
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 117/221 (52%), Gaps = 21/221 (9%)
Query: 247 KFSK-IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKC 304
+FSK I +L N + +TD L+ LK NL++L C + GL L L L+
Sbjct: 222 RFSKKIEALNFSNQAY--LTDVHLLALKDCKNLKALYFRKCPNLTAAGLAYLRPLVALQH 279
Query: 305 LELSD-TQVGSSGLRHLSGLTNLESINLSFTG-ISDGSLRKLAGLSSLKSLNLDA---RQ 359
L+L+ + +GL HL+ L L+ +NLS G ++D L L+ L++L+ LNL +
Sbjct: 280 LDLNYCYNLTDAGLAHLAPLVALKHLNLSGHGYLTDAGLAHLSPLTALQHLNLSECCNYK 339
Query: 360 ITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEI--CGG---GLTDAGL 413
+TD GLA L L L +L+L ++ T +G A+LR L+ L + CGG GL AGL
Sbjct: 340 LTDAGLAHLRPLVALKYLNLSRCSKFTGAGLAHLRPLTALQHLNLSGCGGIGAGLASAGL 399
Query: 414 ------TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
T L LN+S +T L HL PL+ L+ L L +C
Sbjct: 400 AHLRPLTALQHLNLSWCGVTDDELAHLTPLEALQYLDLSNC 440
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDG----GLEHLRGLSNLTSLSFRRNNAITAQ 122
S T +GL HL+ + LQ L+ + C I G GL HLR L+ L L+ +T
Sbjct: 363 SKFTGAGLAHLRPLTALQHLNLSGCGGIGAGLASAGLAHLRPLTALQHLNLSW-CGVTDD 421
Query: 123 GMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
+ L L LDL C + GL +L L+ L+ LN+ C+ +T++ + L LT
Sbjct: 422 ELAHLTPLEALQYLDLSNCWHLTDAGLAHLNPLIALQHLNLSKCDQLTNAGLAHLIPLTA 481
Query: 182 LKSLQIS-CSKVTDSGIAYLKGL 203
L+ L +S CS +TD G+A L+
Sbjct: 482 LQHLNLSGCSNLTDDGLARLRPF 504
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++LS VTD L HL LQ LD + C ++D GL HL L L L+ +
Sbjct: 406 TALQHLNLSWCGVTDDELAHLTPLEALQYLDLSNCWHLTDAGLAHLNPLIALQHLNLSKC 465
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRI 144
+ +T G+ L L L+L C+ +
Sbjct: 466 DQLTNAGLAHLIPLTALQHLNLSGCSNL 493
>gi|156406568|ref|XP_001641117.1| predicted protein [Nematostella vectensis]
gi|156228254|gb|EDO49054.1| predicted protein [Nematostella vectensis]
Length = 803
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 186/397 (46%), Gaps = 60/397 (15%)
Query: 72 SGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGL- 130
+G HL+ L L N C +I +S L + A+T + + AF
Sbjct: 416 AGQRHLQPLVTLGVLPHNVCDKI----------ISRLVE-----DKALTPKVLHAFISCC 460
Query: 131 INLVKLDLERCTRIHGG--LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
+ +KLD C + L L+ +L L+IK C ITD ++ + L L +LQ+
Sbjct: 461 LRYIKLD---CYLLVTNDLLAELRFHRQLVHLSIKSCPIITDKALEAVVDLPALTTLQLD 517
Query: 189 CSKVTDSGIAYLKG----LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
+K++D G+ Y G +Q L L+L G VT SL+ L L L +++
Sbjct: 518 NTKISDKGLMYFSGHANCIQTLVHLSLNGTGVTNQGTASLADWKILRILGLENTKIT--S 575
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
+ + LK LN+ F +TDECLV L +L SLN+ + D GL +L GL L
Sbjct: 576 LDVIRHLQHLKTLNVAFTGVTDECLVALNSHPSLSSLNILQTSVTDRGLQHLKGL-PLSS 634
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 364
L+LSD + I+D ++ +AG++SL L L ++TD G
Sbjct: 635 LDLSD-----------------------YRNITDSGVQYIAGMTSLTRLLLSNTRLTDEG 671
Query: 365 LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL--------TGL 416
+ L+ L L L++ +TD G+ L NF NL+ L + G+TD L L
Sbjct: 672 MVQLSGLAKLVELNVDRTVVTDKGSRVLSNFANLQILGLSSTGVTDKLLRDGVLNRCKKL 731
Query: 417 VSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAN 453
LN+S + +T+ G++HL+ L +L L L+ +VTA+
Sbjct: 732 CKLNLSRTSVTNRGIKHLE-LNSLTLLNLDWTRVTAD 767
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 176/388 (45%), Gaps = 54/388 (13%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLL 60
+LP ++ +I + LV + LT L AF C L+ + L Y LL
Sbjct: 429 VLPHNVCDKIISRLVEDKALTPKVLHAFISCCLRYIKLDCY-----------------LL 471
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
VT+ L L+ L L C I+D LE + L LT+L N I+
Sbjct: 472 --------VTNDLLAELRFHRQLVHLSIKSCPIITDKALEAVVDLPALTTLQLD-NTKIS 522
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
+G+ F+G N ++ T +H ++L G +T+ L+
Sbjct: 523 DKGLMYFSGHANCIQ------TLVH---LSLNG------------TGVTNQGTASLADWK 561
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
L+ L + +K+T + ++ LQ L LN+ VT CL +L++ SL LN+ + +
Sbjct: 562 ILRILGLENTKIT--SLDVIRHLQHLKTLNVAFTGVTDECLVALNSHPSLSSLNILQTSV 619
Query: 241 SDDGCEKFSKIGSLKVLNLG-FNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
+D G + + L L+L + ITD + ++ G+T+L L L + + DEG+V L+GL
Sbjct: 620 TDRGLQHLKGL-PLSSLDLSDYRNITDSGVQYIAGMTSLTRLLLSNTRLTDEGMVQLSGL 678
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK--LAGLSSLKSLNLDA 357
L L + T V G R LS NL+ + LS TG++D LR L L LNL
Sbjct: 679 AKLVELNVDRTVVTDKGSRVLSNFANLQILGLSSTGVTDKLLRDGVLNRCKKLCKLNLSR 738
Query: 358 RQITDTGLAALTSLTGLTHLDLFGARIT 385
+T+ G+ L L LT L+L R+T
Sbjct: 739 TSVTNRGIKHL-ELNSLTLLNLDWTRVT 765
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 108/208 (51%), Gaps = 7/208 (3%)
Query: 41 YPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLE 100
+ GV D+ + + S SL S+++ + VTD GL HLK L SLD + I+D G++
Sbjct: 592 FTGVTDECLVALNSH-PSLSSLNILQTSVTDRGLQHLKGLP-LSSLDLSDYRNITDSGVQ 649
Query: 101 HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL 160
++ G+++LT L N +T +GM +GL LV+L+++R G L L+ L
Sbjct: 650 YIAGMTSLTRL-LLSNTRLTDEGMVQLSGLAKLVELNVDRTVVTDKGSRVLSNFANLQIL 708
Query: 161 NIKWCNCITDSDMKP--LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
+ +TD ++ L+ L L +S + VT+ GI +L+ L LTLLNL+ VTA
Sbjct: 709 GLS-STGVTDKLLRDGVLNRCKKLCKLNLSRTSVTNRGIKHLE-LNSLTLLNLDWTRVTA 766
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCE 246
C L+ +L L ++ C G E
Sbjct: 767 DCGLLLTGCPALKALRMSNCTPPSPGDE 794
>gi|397646482|gb|EJK77289.1| hypothetical protein THAOC_00890 [Thalassiosira oceanica]
Length = 702
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 188/374 (50%), Gaps = 32/374 (8%)
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+ IT +GM AF+ L + L C R+ +VN+ L SLN+ C C+TD ++
Sbjct: 293 HGITGKGMLAFSRSPRLHTISLANCRRLTDEAVVNISHCTSLTSLNVGGCRCLTDRSLEA 352
Query: 176 LSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
+SGL +L+ L +S C +TD G+ +L L L L+L A ++ +L L
Sbjct: 353 MSGLLDLRRLDLSQCDLITDDGLIFLGELDLLEELSLGNKSCGMAIQQRNRSI-ALKTLR 411
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH-LKGLTNLESLNLDSC-GIGDEG 292
L RC +++DG + ++ SL+ L++ ++ L L+ LTNL SL+ C GI
Sbjct: 412 LARCAITNDGLDYLEQLQSLEDLDINGCSLSSTALGESLEKLTNLNSLDASHCPGI---- 467
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
L L+ L L+DTQ+ + + ++ L L S++L + +S LR LA L L S
Sbjct: 468 ------LPGLEVLNLADTQISDNAMSKVAKLAGLRSLSLFYCNVSSRGLRHLASLEKLDS 521
Query: 353 LNLDAR---------QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
LNLD+R ++TD G + + + LT L L G + D G A++ L SL +
Sbjct: 522 LNLDSRDIGDEGRPNRVTDLGCSYIAKIKTLTTLQLAGGGVGDLGCAHIATIDALESLNL 581
Query: 404 CG-------GGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIK 456
G + A L+ L +LN+SN+R+TS L+ L L+SL L C + + I+
Sbjct: 582 SQNESITNRGAASLAALSNLRALNLSNTRVTSNALKFFHGLSKLQSLALYGCIMEDSPIE 641
Query: 457 RLQSRDLPNLVSFR 470
LQ ++P L R
Sbjct: 642 SLQD-EVPTLRCLR 654
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGS 57
LP+D+ +I L L ++ A +C L LCL GVND+++ + S GS
Sbjct: 47 LPQDVVDRIVKSLTAHAALNCTTMRALSNCELGTLCLADARGVNDEFLMALCSSGS 102
>gi|290985427|ref|XP_002675427.1| predicted protein [Naegleria gruberi]
gi|284089023|gb|EFC42683.1| predicted protein [Naegleria gruberi]
Length = 324
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 152/297 (51%), Gaps = 7/297 (2%)
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
+ +L SLNI N I D + K +S + L SL IS + + D G + +++LT LN+
Sbjct: 24 MKQLISLNI-GKNEIGDEEAKLISEMKQLTSLNISDNLIGDEGAKLISEMKQLTSLNICC 82
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
+ LS + L LN+ ++ D+G + S+ L LN+GF +I E +
Sbjct: 83 NRIGVEGAKYLSEMKQLISLNICENEIGDEGAKLISETRQLTSLNIGFTQIGGEGAKFIS 142
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
+ L SL++ IG EG ++ + L L +SD +G G + +S + L S+N+S
Sbjct: 143 EMKQLTSLDISDNLIGVEGAKFISEMKQLTSLNISDNLIGDEGAKLISEMKQLTSLNISN 202
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
I ++ ++ + L SL++ QI D G ++ + LT L++ G RI D GA +
Sbjct: 203 NQIGGEGVKLISEMKQLTSLDISNNQIGDEGAKLISEMKQLTSLNISGNRIGDEGAKSMS 262
Query: 394 NFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
K L+SL+I + D G + L+SLN+ +RI G+++++ +K L SLT
Sbjct: 263 EMKQLKSLDISYNQIGDEGTKLISEMKQLISLNIRANRIGDEGVKYIREMKQLTSLT 319
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 126/252 (50%), Gaps = 1/252 (0%)
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
+ +L SLNI CN I K LS + L SL I +++ D G + ++LT LN+
Sbjct: 72 MKQLTSLNI-CCNRIGVEGAKYLSEMKQLISLNICENEIGDEGAKLISETRQLTSLNIGF 130
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
+ +S + L L+++ + +G + S++ L LN+ N I DE +
Sbjct: 131 TQIGGEGAKFISEMKQLTSLDISDNLIGVEGAKFISEMKQLTSLNISDNLIGDEGAKLIS 190
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
+ L SLN+ + IG EG+ ++ + L L++S+ Q+G G + +S + L S+N+S
Sbjct: 191 EMKQLTSLNISNNQIGGEGVKLISEMKQLTSLDISNNQIGDEGAKLISEMKQLTSLNISG 250
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
I D + ++ + LKSL++ QI D G ++ + L L++ RI D G Y+R
Sbjct: 251 NRIGDEGAKSMSEMKQLKSLDISYNQIGDEGTKLISEMKQLISLNIRANRIGDEGVKYIR 310
Query: 394 NFKNLRSLEICG 405
K L SL G
Sbjct: 311 EMKQLTSLTYKG 322
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 6/214 (2%)
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNL 302
D + S++ L LN+G NEI DE + + L SLN+ IGDEG ++ + L
Sbjct: 16 DEAKLISEMKQLISLNIGKNEIGDEEAKLISEMKQLTSLNISDNLIGDEGAKLISEMKQL 75
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
L + ++G G ++LS + L S+N+ I D + ++ L SLN+ QI
Sbjct: 76 TSLNICCNRIGVEGAKYLSEMKQLISLNICENEIGDEGAKLISETRQLTSLNIGFTQIGG 135
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGL 416
G ++ + LT LD+ I GA ++ K L SL I + D G + L
Sbjct: 136 EGAKFISEMKQLTSLDISDNLIGVEGAKFISEMKQLTSLNISDNLIGDEGAKLISEMKQL 195
Query: 417 VSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
SLN+SN++I G++ + +K L SL + + ++
Sbjct: 196 TSLNISNNQIGGEGVKLISEMKQLTSLDISNNQI 229
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 131/274 (47%), Gaps = 13/274 (4%)
Query: 203 LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
+++LT L++ G + +S + L LN+ + ++ D+ + S++ L LN+ N
Sbjct: 1 MKQLTSLDISGNGIGDEA-KLISEMKQLISLNIGKNEIGDEEAKLISEMKQLTSLNISDN 59
Query: 263 EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG 322
I DE + + L SLN+ IG EG L+ + L L + + ++G G + +S
Sbjct: 60 LIGDEGAKLISEMKQLTSLNICCNRIGVEGAKYLSEMKQLISLNICENEIGDEGAKLISE 119
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
L S+N+ FT I + ++ + L SL++ I G ++ + LT L++
Sbjct: 120 TRQLTSLNIGFTQIGGEGAKFISEMKQLTSLDISDNLIGVEGAKFISEMKQLTSLNISDN 179
Query: 383 RITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKP 436
I D GA + K L SL I + G + L SL++SN++I G + +
Sbjct: 180 LIGDEGAKLISEMKQLTSLNISNNQIGGEGVKLISEMKQLTSLDISNNQIGDEGAKLISE 239
Query: 437 LKNLRSLTLESCKV------TANDIKRLQSRDLP 464
+K L SL + ++ + +++K+L+S D+
Sbjct: 240 MKQLTSLNISGNRIGDEGAKSMSEMKQLKSLDIS 273
>gi|406831735|ref|ZP_11091329.1| hypothetical protein SpalD1_08854 [Schlesneria paludicola DSM
18645]
Length = 422
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 188/396 (47%), Gaps = 33/396 (8%)
Query: 25 LEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQ 84
+E D A + + P N+K + ++ S +L S+D+S +T+ GL L L+
Sbjct: 45 VERSSDRATVRVSFNEGPRFNEKHLHLLKSL-PNLTSLDVSAIVITEDGLRELGQLKFLR 103
Query: 85 SLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL--DLERCT 142
L + I+D GL L L +LT L+ ++T +G+K F + +++ DLE
Sbjct: 104 RLVVD-GRSITDEGLMELVDLRSLTELTIS-ATSVTDEGLKQFQSFLPQLRILSDLESVR 161
Query: 143 RI--HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYL 200
R+ GG + + ++ +++ D D++ L L +L+SL + + +TD + +
Sbjct: 162 RLAGFGGEIE-RSDGRVIRISLHNKPQFGDGDIESLMSLRHLESLDLGGTSITDGALLTV 220
Query: 201 KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG 260
LQKL L L +T L +L L L L+L+R ++ D G ++ K+ L L L
Sbjct: 221 GRLQKLIQLQLPSTRITDRGLKALRNLKQLSILDLSRTRIGDVGLDEIKKL-PLTSLMLH 279
Query: 261 FNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
++TD L+ L+ L ++ L L C I D GLV L NL L L+ T+
Sbjct: 280 DTQVTDFGLLALQDLKEVQFLGLYKCAITDTGLVTLGRFQNLSELCLNSTR--------- 330
Query: 321 SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
I+DG LR + L L+ L L QITD GL L L L L L
Sbjct: 331 ---------------ITDGGLRNVGQLRKLRILQLGDSQITDAGLLELRHLNNLVGLVLR 375
Query: 381 GARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL 416
G R+TD L+ ++NL +++ G T+AG+T L
Sbjct: 376 GTRVTDDSVNTLKRYQNLVHIDLRQTGFTEAGVTEL 411
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 168/385 (43%), Gaps = 33/385 (8%)
Query: 89 NFCIQISDGGLEHLRGLSNLTS------LSFRRNNAITAQGMKAFAGLINLVKLDLERCT 142
N + + LE L G+ +S +SF + + L NL LD+
Sbjct: 28 NHAMSAAIEKLERLGGIVERSSDRATVRVSFNEGPRFNEKHLHLLKSLPNLTSLDVSAIV 87
Query: 143 RIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKG 202
GL L L L L + ITD + L L +L L IS + VTD G+ +
Sbjct: 88 ITEDGLRELGQLKFLRRLVVDG-RSITDEGLMELVDLRSLTELTISATSVTDEGLKQFQS 146
Query: 203 -LQKLTLL-NLEGCPVTAACLDSLS-ALGSLFYLNL-NRCQLSDDGCEKFSKIGSLKVLN 258
L +L +L +LE A + + G + ++L N+ Q D E + L+ L+
Sbjct: 147 FLPQLRILSDLESVRRLAGFGGEIERSDGRVIRISLHNKPQFGDGDIESLMSLRHLESLD 206
Query: 259 LGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
LG ITD L+ + L L L L S I D GL L L L L+LS T++G GL
Sbjct: 207 LGGTSITDGALLTVGRLQKLIQLQLPSTRITDRGLKALRNLKQLSILDLSRTRIGDVGLD 266
Query: 319 HLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 378
+ L L S+ L T ++D L L L ++ L L ITDTGL L L+ L
Sbjct: 267 EIKKLP-LTSLMLHDTQVTDFGLLALQDLKEVQFLGLYKCAITDTGLVTLGRFQNLSELC 325
Query: 379 LFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLK 438
L RITD G LRN LR L I L + +S+IT AGL L+ L
Sbjct: 326 LNSTRITDGG---LRNVGQLRKLRI---------------LQLGDSQITDAGLLELRHLN 367
Query: 439 NLRSLTLESCKVT---ANDIKRLQS 460
NL L L +VT N +KR Q+
Sbjct: 368 NLVGLVLRGTRVTDDSVNTLKRYQN 392
>gi|449132603|ref|ZP_21768618.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
gi|448888282|gb|EMB18604.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
Length = 455
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 151/320 (47%), Gaps = 29/320 (9%)
Query: 42 PGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEH 101
PG++D M+ + S + L + LS + +TD + + L+ L F ++D GLE
Sbjct: 118 PGIDDAGMENLTSL-TKLERLILSDTAITDRTIETAGKMNTLEVL-FLRRTGVTDEGLEL 175
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLN 161
L GLS L ++ R N I GM A + L + LE+ GLV L L L+ +N
Sbjct: 176 LTGLSKLRAIDLRNTN-IGDAGMDPLAKIKTLADVQLEKSKVTDEGLVKLAPL-PLKYIN 233
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA-- 219
+C I MK L L+ LQ SK+ D+ +A LKGL KLT L + GC VT
Sbjct: 234 FNYCTTINGPTMKMLGQTPTLERLQGDYSKINDASMAELKGLSKLTHLRIRGCDVTGEGI 293
Query: 220 ----------------------CLDSLSALGSLFYLNLNRCQL-SDDGCEKFSKIGSLKV 256
L+ +S L ++ +++++ C+L S +G + K+ L
Sbjct: 294 KHIANNKALAKFELRDSSVDDKGLEVISQLPAVTHVDISECRLASPEGIAQLGKLTGLTY 353
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
L L + D L L NLE LNL S + D+ L L + LK L ++ TQ+G
Sbjct: 354 LGLWETKTNDATLEAFGELVNLEELNLKSTSVTDQSLPVLMKMTKLKTLNVAGTQLGDDS 413
Query: 317 LRHLSGLTNLESINLSFTGI 336
L+ L NL+S+N++ T I
Sbjct: 414 FLELAKLPNLKSMNVANTSI 433
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 155/352 (44%), Gaps = 10/352 (2%)
Query: 107 NLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCN 166
N+ S + M+ +G+ N + G+ NL L KLE L I
Sbjct: 84 NVVEFSIANQKGGIEESMQHLSGIPNTLIATFNGPGIDDAGMENLTSLTKLERL-ILSDT 142
Query: 167 CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA 226
ITD ++ + L+ L + + VTD G+ L GL KL ++L + A +D L+
Sbjct: 143 AITDRTIETAGKMNTLEVLFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDPLAK 202
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDS 285
+ +L + L + +++D+G K + + LK +N + I + L LE L D
Sbjct: 203 IKTLADVQLEKSKVTDEGLVKLAPL-PLKYINFNYCTTINGPTMKMLGQTPTLERLQGDY 261
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
I D + L GL L L + V G++H++ L L + + D L ++
Sbjct: 262 SKINDASMAELKGLSKLTHLRIRGCDVTGEGIKHIANNKALAKFELRDSSVDDKGLEVIS 321
Query: 346 GLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
L ++ +++ + R + G+A L LTGLT+L L+ + D+ NL L +
Sbjct: 322 QLPAVTHVDISECRLASPEGIAQLGKLTGLTYLGLWETKTNDATLEAFGELVNLEELNLK 381
Query: 405 GGGLTDAGL------TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
+TD L T L +LNV+ +++ L L NL+S+ + + +
Sbjct: 382 STSVTDQSLPVLMKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNVANTSI 433
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 153/336 (45%), Gaps = 6/336 (1%)
Query: 71 DSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGL 130
+ + HL N FN I D G+E+L L+ L L + AIT + ++ +
Sbjct: 98 EESMQHLSGIPNTLIATFN-GPGIDDAGMENLTSLTKLERLILS-DTAITDRTIETAGKM 155
Query: 131 INLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCS 190
L L L R GL L GL KL +++++ N I D+ M PL+ + L +Q+ S
Sbjct: 156 NTLEVLFLRRTGVTDEGLELLTGLSKLRAIDLRNTN-IGDAGMDPLAKIKTLADVQLEKS 214
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS 249
KVTD G+ L L L +N C + + L +L L + +++D +
Sbjct: 215 KVTDEGLVKLAPL-PLKYINFNYCTTINGPTMKMLGQTPTLERLQGDYSKINDASMAELK 273
Query: 250 KIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSD 309
+ L L + ++T E + H+ L L + D+GL ++ L + +++S+
Sbjct: 274 GLSKLTHLRIRGCDVTGEGIKHIANNKALAKFELRDSSVDDKGLEVISQLPAVTHVDISE 333
Query: 310 TQVGSS-GLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
++ S G+ L LT L + L T +D +L L +L+ LNL + +TD L L
Sbjct: 334 CRLASPEGIAQLGKLTGLTYLGLWETKTNDATLEAFGELVNLEELNLKSTSVTDQSLPVL 393
Query: 369 TSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
+T L L++ G ++ D L NL+S+ +
Sbjct: 394 MKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNVA 429
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 33/290 (11%)
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGS 253
+ + +L G+ + G + A +++L++L L L L+ ++D E K+ +
Sbjct: 98 EESMQHLSGIPNTLIATFNGPGIDDAGMENLTSLTKLERLILSDTAITDRTIETAGKMNT 157
Query: 254 LKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVG 313
L+VL L +TDE L L GL+ L +++L + IGD G+ L + L ++L ++V
Sbjct: 158 LEVLFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDPLAKIKTLADVQLEKSKVT 217
Query: 314 SSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT 372
GL L+ L L+ IN ++ T I+ +++ L +L+ L D +I D +A L L+
Sbjct: 218 DEGLVKLAPLP-LKYINFNYCTTINGPTMKMLGQTPTLERLQGDYSKINDASMAELKGLS 276
Query: 373 GLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG-------------------- 412
LTHL + G +T G ++ N K L E+ + D G
Sbjct: 277 KLTHLRIRGCDVTGEGIKHIANNKALAKFELRDSSVDDKGLEVISQLPAVTHVDISECRL 336
Query: 413 -----------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
LTGL L + ++ A L L NL L L+S VT
Sbjct: 337 ASPEGIAQLGKLTGLTYLGLWETKTNDATLEAFGELVNLEELNLKSTSVT 386
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 91/201 (45%), Gaps = 10/201 (4%)
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
+E + HL G+ N + GI D G+ NLT L L+ L LSDT + + +
Sbjct: 98 EESMQHLSGIPNTLIATFNGPGIDDAGMENLTSLTKLERLILSDTAITDRTIETAGKMNT 157
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
LE + L TG++D L L GLS L++++L I D G+ L + L + L +++T
Sbjct: 158 LEVLFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDPLAKIKTLADVQLEKSKVT 217
Query: 386 DSGAAYLR-------NFKNLRSLEICGGGLTDAGLTG-LVSLNVSNSRITSAGLRHLKPL 437
D G L NF + I G + G T L L S+I A + LK L
Sbjct: 218 DEGLVKLAPLPLKYINFNYCTT--INGPTMKMLGQTPTLERLQGDYSKINDASMAELKGL 275
Query: 438 KNLRSLTLESCKVTANDIKRL 458
L L + C VT IK +
Sbjct: 276 SKLTHLRIRGCDVTGEGIKHI 296
>gi|290970865|ref|XP_002668286.1| predicted protein [Naegleria gruberi]
gi|284081599|gb|EFC35542.1| predicted protein [Naegleria gruberi]
Length = 368
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 182/356 (51%), Gaps = 6/356 (1%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L S+ +SG+ + D + + L SLD + +I D G++ + + L SL+ NN
Sbjct: 4 LTSLIISGNQIGDKEAKFISEMKQLTSLDI-YNNRIGDEGVKSISEMKQLVSLNIY-NNR 61
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS 177
I +G+K+ + L LD+ RI G+ + + +L SLNI N I D + +S
Sbjct: 62 IGDEGVKSIIEMKQLTSLDI-GGNRIGDEGVKFISEMKQLTSLNISE-NQIGDKEATFIS 119
Query: 178 GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
+ L SL I +++ D G+ + +++L L++ ++ +S + L LN+
Sbjct: 120 EMKQLTSLNIYNNRIGDEGVKSIIEMKQLKSLDIGRNQISVEGAKFISEMKQLVSLNIYN 179
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
++ D+G + S++ L LN+ N I D+ + + L SL++ + IGDEG + ++
Sbjct: 180 NRI-DEGVKSISEMKQLTSLNIAENRIGDKEAKFISEMKQLTSLDIYNNRIGDEGAIFIS 238
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA 357
+ L L + + ++G G++ + + L S+++ I D ++ ++ + L SL++
Sbjct: 239 KMKQLTSLNIYNNRIGDEGVKSIIEMKRLTSLDIGRNRIGDEGVKFISEMKQLASLDISE 298
Query: 358 RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL 413
+I D G+ +++ + LT L++ RI D GA + K L+SL+I G + D G+
Sbjct: 299 NRIGDEGVKSISEMKQLTSLNISENRIGDEGAKSISEMKRLKSLDIGGNQIGDEGV 354
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 178/358 (49%), Gaps = 5/358 (1%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
+ DK I S+ L S+D+ + + D G+ + + L SL+ + +I D G++ +
Sbjct: 14 IGDKEAKFI-SEMKQLTSLDIYNNRIGDEGVKSISEMKQLVSLNI-YNNRIGDEGVKSII 71
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
+ LTSL N I +G+K + + L L++ + + +L SLNI
Sbjct: 72 EMKQLTSLDIG-GNRIGDEGVKFISEMKQLTSLNISENQIGDKEATFISEMKQLTSLNI- 129
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
+ N I D +K + + LKSL I ++++ G ++ +++L LN+ + S
Sbjct: 130 YNNRIGDEGVKSIIEMKQLKSLDIGRNQISVEGAKFISEMKQLVSLNIYNNRIDEGV-KS 188
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
+S + L LN+ ++ D + S++ L L++ N I DE + + + L SLN+
Sbjct: 189 ISEMKQLTSLNIAENRIGDKEAKFISEMKQLTSLDIYNNRIGDEGAIFISKMKQLTSLNI 248
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
+ IGDEG+ ++ + L L++ ++G G++ +S + L S+++S I D ++
Sbjct: 249 YNNRIGDEGVKSIIEMKRLTSLDIGRNRIGDEGVKFISEMKQLASLDISENRIGDEGVKS 308
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
++ + L SLN+ +I D G +++ + L LD+ G +I D G ++ K L SL
Sbjct: 309 ISEMKQLTSLNISENRIGDEGAKSISEMKRLKSLDIGGNQIGDEGVKFISEMKQLASL 366
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 150/310 (48%), Gaps = 31/310 (10%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+ L SL IS +++ D ++ +++LT L++ + + S+S + L LN+
Sbjct: 1 MKQLTSLIISGNQIGDKEAKFISEMKQLTSLDIYNNRIGDEGVKSISEMKQLVSLNIYNN 60
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDE---CLVHLKGLTNLE---------------- 279
++ D+G + ++ L L++G N I DE + +K LT+L
Sbjct: 61 RIGDEGVKSIIEMKQLTSLDIGGNRIGDEGVKFISEMKQLTSLNISENQIGDKEATFISE 120
Query: 280 -----SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
SLN+ + IGDEG+ ++ + LK L++ Q+ G + +S + L S+N+
Sbjct: 121 MKQLTSLNIYNNRIGDEGVKSIIEMKQLKSLDIGRNQISVEGAKFISEMKQLVSLNIYNN 180
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
I +G ++ ++ + L SLN+ +I D ++ + LT LD++ RI D GA ++
Sbjct: 181 RIDEG-VKSISEMKQLTSLNIAENRIGDKEAKFISEMKQLTSLDIYNNRIGDEGAIFISK 239
Query: 395 FKNLRSLEICGGGLTDAGLTGLV------SLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
K L SL I + D G+ ++ SL++ +RI G++ + +K L SL +
Sbjct: 240 MKQLTSLNIYNNRIGDEGVKSIIEMKRLTSLDIGRNRIGDEGVKFISEMKQLASLDISEN 299
Query: 449 KVTANDIKRL 458
++ +K +
Sbjct: 300 RIGDEGVKSI 309
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 145/277 (52%), Gaps = 4/277 (1%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L S+++S + + D + + L SL+ + +I D G++ + + L SL
Sbjct: 95 SEMKQLTSLNISENQIGDKEATFISEMKQLTSLNI-YNNRIGDEGVKSIIEMKQLKSLDI 153
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
RN I+ +G K + + LV L++ RI G+ ++ + +L SLNI N I D +
Sbjct: 154 GRN-QISVEGAKFISEMKQLVSLNI-YNNRIDEGVKSISEMKQLTSLNI-AENRIGDKEA 210
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K +S + L SL I +++ D G ++ +++LT LN+ + + S+ + L L
Sbjct: 211 KFISEMKQLTSLDIYNNRIGDEGAIFISKMKQLTSLNIYNNRIGDEGVKSIIEMKRLTSL 270
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
++ R ++ D+G + S++ L L++ N I DE + + + L SLN+ IGDEG
Sbjct: 271 DIGRNRIGDEGVKFISEMKQLASLDISENRIGDEGVKSISEMKQLTSLNISENRIGDEGA 330
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
+++ + LK L++ Q+G G++ +S + L S+N
Sbjct: 331 KSISEMKRLKSLDIGGNQIGDEGVKFISEMKQLASLN 367
>gi|330506767|ref|YP_004383195.1| internalin-A [Methanosaeta concilii GP6]
gi|328927575|gb|AEB67377.1| internalin-A, putative [Methanosaeta concilii GP6]
Length = 567
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 205/375 (54%), Gaps = 38/375 (10%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLER 140
+NL LD + QI+D L GL+NLT L NN IT + + +GLINL+ LDL
Sbjct: 166 TNLTDLDLSTN-QITDAS--PLSGLTNLTDLDL-DNNQIT--DVSSLSGLINLMNLDLS- 218
Query: 141 CTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYL 200
RI V+L GL + L++ W N ITD LSGLTNL L +S +++ D ++ L
Sbjct: 219 SNRITN--VSLSGLTNVVWLDL-WGNQITD---VTLSGLTNLTWLDVSRNQIAD--VSSL 270
Query: 201 KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG 260
GL LT L L GC + SLS L +L L+L+ Q++D S + +L L+L
Sbjct: 271 SGLTNLTKLYL-GCN-QITDVSSLSGLTNLTDLDLSTNQITD--ASPLSGLTNLTYLDLD 326
Query: 261 FNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
N I D V L LTNL L L + I D + +L+GL NLK L+LS+ Q+ + L
Sbjct: 327 NNRIND---VSLSDLTNLTDLELSNNQIND--VSSLSGLTNLKDLDLSNNQIN--DISSL 379
Query: 321 SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
SGLTNL + LS I++ + L+ L+SL+ L+LD QI D +++L++LT L L L
Sbjct: 380 SGLTNLTDLELSSNEITN--ISSLSSLASLRCLDLDNNQIID--VSSLSALTSLKWLRLC 435
Query: 381 GARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKP 436
TD A+ L + NLR L++ +TD +GL L LN+S+++IT L
Sbjct: 436 SNHATD--ASSLSSLVNLRWLDLSSNQITDVSPLSGLYNLGWLNLSSNQITDVS--PLSG 491
Query: 437 LKNLRSLTLESCKVT 451
L NL L L S ++T
Sbjct: 492 LANLTGLDLSSNQIT 506
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 178/359 (49%), Gaps = 60/359 (16%)
Query: 131 INLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCS 190
I L+ D+ I G L+ + LE+L+++ N I SD LSGLT LK L++S +
Sbjct: 60 IKLLNADMSSIKDITG----LERCINLENLSLR-ENEI--SDASSLSGLTGLKRLELSSN 112
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVTAACL----------------DSLSALGSLFYLN 234
++TD ++ L L+ L+L + V+ + L SLS L +L L+
Sbjct: 113 QITDVSLSGLANLETLSLWDNHITNVSLSGLTNLDTLLLWGNKIINVSSLSGLTNLTDLD 172
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL- 293
L+ Q++D S + +L L+L N+ITD + L GL NL +L+L S I + L
Sbjct: 173 LSTNQITD--ASPLSGLTNLTDLDLDNNQITD--VSSLSGLINLMNLDLSSNRITNVSLS 228
Query: 294 -----------------VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
V L+GL NL L++S Q+ + LSGLTNL + L I
Sbjct: 229 GLTNVVWLDLWGNQITDVTLSGLTNLTWLDVSRNQIA--DVSSLSGLTNLTKLYLGCNQI 286
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
+D S L+GL++L L+L QITD + L+ LT LT+LDL RI D L +
Sbjct: 287 TDVS--SLSGLTNLTDLDLSTNQITDA--SPLSGLTNLTYLDLDNNRIND---VSLSDLT 339
Query: 397 NLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
NL LE+ + D +GLT L L++SN++I + L L NL L L S ++T
Sbjct: 340 NLTDLELSNNQINDVSSLSGLTNLKDLDLSNNQIN--DISSLSGLTNLTDLELSSNEIT 396
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 11/132 (8%)
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGL 148
C+ + + + + LS LTSL + R + A + + L+NL LDL + T +
Sbjct: 409 CLDLDNNQIIDVSSLSALTSLKWLRLCSNHATDASSLSSLVNLRWLDLSSNQITDVSP-- 466
Query: 149 VNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTL 208
L GL L LN+ N ITD + PLSGL NL L +S +++TD ++ L L L
Sbjct: 467 --LSGLYNLGWLNLS-SNQITD--VSPLSGLANLTGLDLSSNQITD--VSPLSNLTNLIW 519
Query: 209 LNLEGCPVTAAC 220
++L + A
Sbjct: 520 MDLRSKQIPDAS 531
>gi|186701224|gb|ACC91251.1| leucine-rich repeat family protein [Arabidopsis halleri]
Length = 600
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 138/472 (29%), Positives = 204/472 (43%), Gaps = 132/472 (27%)
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGG-LVNLKGLMK 156
G +H ++ ++ R ++I A+ M G +NL+ L+L C RI+ L + GL
Sbjct: 58 GFKH-----SVENIDLRGESSINAEWMAYIGGFVNLISLNLSDCQRINSSTLWPITGLTS 112
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV 216
L L++ C +TD+ +K L ++NLK L IS + VT GI+ L L+KL+LL+L G PV
Sbjct: 113 LTELDLSRCWKVTDAGIKHLQSVSNLKKLWISQTGVTKVGISLLASLKKLSLLDLGGLPV 172
Query: 217 TAACLDSLSALGSLFYL-------------------NLNRCQLSDDGCEKFSKIGSLKVL 257
T L +L AL L YL NL+ LS + I L+ L
Sbjct: 173 TDHNLIALQALTKLEYLDIWGSNVTNQGAISILQFSNLSFLNLSWTSVTQTPNIPHLECL 232
Query: 258 NLGFNEITDECLVH---------------------------------------------- 271
++ I E H
Sbjct: 233 HMNMCTIVSEPKTHSSLASLKKLVLSGANFSAETEALSFTNKSSITYLDVSKTSLQNFSF 292
Query: 272 LKGLTNLESLNLDSCGIGDE--GLVNLTGLCNLKCLELSDTQVGSSGLRHLSG-LTNLES 328
L+ + NLE L+L S GD+ G V G NL+ L +S+T++ S+G+ +L+G + LE+
Sbjct: 293 LETMINLEHLDLSSTAFGDDSVGFVACVG-ENLRNLNVSETKITSAGVGNLAGHVPQLET 351
Query: 329 INLSFTGISD--------------------------------------GSLRKLAGLSSL 350
+LS T + D SL L L+SL
Sbjct: 352 FSLSQTFVDDLSILLISTMMPCVKALDLGMTSIRGFILQQSPQEEQAEPSLAALQSLTSL 411
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
K+L+L+ + DT L+AL+SLTGLTHL L +TDS +L + N
Sbjct: 412 KTLSLEHPYLGDTALSALSSLTGLTHLSLRSTSLTDSTLHHLSSLPN------------- 458
Query: 411 AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK-VTANDIKRLQSR 461
LVSL V ++ +TS GL +P K LR+L L+ C +T +DI L R
Sbjct: 459 -----LVSLGVRDAVLTSNGLEKFRPPKRLRTLDLKGCWLLTKDDIAGLCKR 505
>gi|330842680|ref|XP_003293301.1| hypothetical protein DICPUDRAFT_158109 [Dictyostelium purpureum]
gi|325076385|gb|EGC30175.1| hypothetical protein DICPUDRAFT_158109 [Dictyostelium purpureum]
Length = 684
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 187/406 (46%), Gaps = 54/406 (13%)
Query: 49 MDVIASQGSSLLSVDLSGSD-VTDSGLIH--LKDCSNLQSLDFNFCIQISDGGLEHLRGL 105
++ I S G + +DLS + ++ +H + +Q ++F+ CI ++D GLE +
Sbjct: 276 LNQILSSGVRVFKLDLSNQSLIVNNDFLHNCFRYLVEVQDVNFSNCINMTDYGLEVFKNE 335
Query: 106 S---NLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
NL L R N +T G K NLK L+ LE L +
Sbjct: 336 KFHRNLRVLDLRHNRNLTDVGCK------------------------NLKNLVNLEELYL 371
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
I+D + L L NLK+L +S K+TD+ + + KLTLLNL +T +
Sbjct: 372 -GSTSISDLGVAFLKQLVNLKTLDVSRCKITDNAMVTISLFSKLTLLNLSETQITDVAIS 430
Query: 223 SLSA-LGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
++ L ++ YL L+ CQ L++ + +++L++ +I+ VHLK L NL
Sbjct: 431 NIHQILTNIQYLYLSNCQKLTNKSLFFLTYFSKMRLLSITGTQISLNGFVHLKRLPNLLY 490
Query: 281 LNL-DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
L L + + D+ +V L L LK L+L+D +S + L L LE + L+ T + D
Sbjct: 491 LELPNRYCLNDQTIVYLNSLTKLKKLDLTDYTYITS-IEPLDNLKYLEELLLANTRVGDS 549
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
S+ + + SL+ L+LD IT G+A L L L L L +I D YL K+LR
Sbjct: 550 SVPAIKKMKSLEVLSLDRTDITSAGVAGLVDL-NLKSLSLMKTKIDDDSINYLSEIKSLR 608
Query: 400 SLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
LN+S++ IT + LK + NL SL L
Sbjct: 609 ------------------QLNISHNNITHKNIEKLKDITNLNSLDL 636
>gi|290991306|ref|XP_002678276.1| predicted protein [Naegleria gruberi]
gi|284091888|gb|EFC45532.1| predicted protein [Naegleria gruberi]
Length = 445
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 195/413 (47%), Gaps = 22/413 (5%)
Query: 6 ISQQIFNELV--------YSRCLTEVSLEAFRDCALQD------LCLGQYPGV-NDKWMD 50
IS+Q FN + + + TE +E F + + + N K++
Sbjct: 39 ISKQFFNVIKERSKLFIEFKKKFTEKRIELFTKSQFMNSIVKVKFSTNLFVSIENHKFI- 97
Query: 51 VIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTS 110
S+ L S+++S + + D + + L SLD QI D G++ + + LT
Sbjct: 98 ---SEMKQLTSLNISNNQINDETAKSIIEMKRLTSLDIGGN-QIGDEGIKLISEMKQLTL 153
Query: 111 LSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITD 170
L N+I +G+K + + L L++ G + + +L SL+I + N I D
Sbjct: 154 LDIS-GNSIGDKGVKPISKMKQLTSLNIYNNEIGVAGSKFIIEMKQLTSLDISY-NEIGD 211
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
K +S L L SL +S +++ D GI + +++LTLL++ G + + +S + L
Sbjct: 212 EGAKSISELKQLTSLTVSGNQIGDEGIKLISEMKQLTLLDISGNSIGDKGVKPISKMKQL 271
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
LN+ ++ G + ++ L L++ +NEI DE + + L SL + IGD
Sbjct: 272 TSLNIYNNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSISEMKQLTSLTISGNQIGD 331
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
EG+ ++ + L L++S VG G++ +S + L S+ + I + ++ + L
Sbjct: 332 EGIKLISEMKQLTLLDISGKSVGDKGVKSISKMKQLTSLTIYTNEIGVAGAKFISEMKQL 391
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
SL++ +I D G +++ L LT LD+ G I D G+ ++ K L+SL+I
Sbjct: 392 TSLDISYNEIGDEGAKSISELKQLTLLDISGNGIGDEGSKFIIGMKQLKSLDI 444
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 145/298 (48%), Gaps = 7/298 (2%)
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
+ +L SLNI N I D K + + L SL I +++ D GI + +++LTLL++ G
Sbjct: 100 MKQLTSLNIS-NNQINDETAKSIIEMKRLTSLDIGGNQIGDEGIKLISEMKQLTLLDISG 158
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
+ + +S + L LN+ ++ G + ++ L L++ +NEI DE +
Sbjct: 159 NSIGDKGVKPISKMKQLTSLNIYNNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSIS 218
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
L L SL + IGDEG+ ++ + L L++S +G G++ +S + L S+N+
Sbjct: 219 ELKQLTSLTVSGNQIGDEGIKLISEMKQLTLLDISGNSIGDKGVKPISKMKQLTSLNIYN 278
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
I + + + L SL++ +I D G +++ + LT L + G +I D G +
Sbjct: 279 NEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSISEMKQLTSLTISGNQIGDEGIKLIS 338
Query: 394 NFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
K L L+I G + D G + L SL + + I AG + + +K L SL +
Sbjct: 339 EMKQLTLLDISGKSVGDKGVKSISKMKQLTSLTIYTNEIGVAGAKFISEMKQLTSLDI 396
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 172/348 (49%), Gaps = 8/348 (2%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW 164
+ LTSL+ NN I + K+ + L LD+ G+ + + +L L+I
Sbjct: 100 MKQLTSLNIS-NNQINDETAKSIIEMKRLTSLDIGGNQIGDEGIKLISEMKQLTLLDIS- 157
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
N I D +KP+S + L SL I +++ +G ++ +++LT L++ + S+
Sbjct: 158 GNSIGDKGVKPISKMKQLTSLNIYNNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSI 217
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
S L L L ++ Q+ D+G + S++ L +L++ N I D+ + + + L SLN+
Sbjct: 218 SELKQLTSLTVSGNQIGDEGIKLISEMKQLTLLDISGNSIGDKGVKPISKMKQLTSLNIY 277
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
+ IG G + + L L++S ++G G + +S + L S+ +S I D ++ +
Sbjct: 278 NNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSISEMKQLTSLTISGNQIGDEGIKLI 337
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
+ + L L++ + + D G+ +++ + LT L ++ I +GA ++ K L SL+I
Sbjct: 338 SEMKQLTLLDISGKSVGDKGVKSISKMKQLTSLTIYTNEIGVAGAKFISEMKQLTSLDIS 397
Query: 405 GGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
+ D G L L L++S + I G + + +K L+SL ++
Sbjct: 398 YNEIGDEGAKSISELKQLTLLDISGNGIGDEGSKFIIGMKQLKSLDIQ 445
>gi|149918767|ref|ZP_01907254.1| hypothetical protein PPSIR1_31833 [Plesiocystis pacifica SIR-1]
gi|149820368|gb|EDM79784.1| hypothetical protein PPSIR1_31833 [Plesiocystis pacifica SIR-1]
Length = 541
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 118/243 (48%), Gaps = 2/243 (0%)
Query: 165 CNC--ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
C+C D + L L L+ L++ S VT +G+ +L L L L GC + +
Sbjct: 294 CDCPRFGDRGLFMLRYLEGLQVLELERSAVTSAGLVHLAENPALEDLTLRGCDLDSEGFT 353
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
+L+AL L L + L D E + SL+ L LG + D L L NLE L+
Sbjct: 354 ALAALPRLRRLIVGPASLLDGKAEGLGLLVSLRELELGLDGFGDRAAQELAPLVNLERLD 413
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
L + + DEGL +L G+ L+ LEL T+V GL HL GL+ LE + L T + D +
Sbjct: 414 LGNTAVSDEGLEHLAGMVRLRELELHHTRVTRHGLEHLQGLSALEILELDHTDVVDEGVA 473
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
LA L +L+ L LD ITD G+A L L+ L L+L +T G L L +
Sbjct: 474 HLAKLGALRELRLDNTLITDVGVAHLAKLSDLERLNLANTVVTSEGVEVLSALPRLEVVN 533
Query: 403 ICG 405
+ G
Sbjct: 534 LAG 536
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 142/329 (43%), Gaps = 42/329 (12%)
Query: 145 HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS---------------- 188
H ++ + L+SL + +T+ + PL GL +L ++ S
Sbjct: 230 HNTMLRVAKAKSLQSLAV-IDTALTNYSLHPLKGLDHLHRIEWSGQGWSNTSPQYLRDLP 288
Query: 189 -------CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
C + D G+ L+ L+ L +L LE VT+A L L+ +L L L C L
Sbjct: 289 IDELICDCPRFGDRGLFMLRYLEGLQVLELERSAVTSAGLVHLAENPALEDLTLRGCDLD 348
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
+G + + L+ L +G + D L L +L L L G GD L L N
Sbjct: 349 SEGFTALAALPRLRRLIVGPASLLDGKAEGLGLLVSLRELELGLDGFGDRAAQELAPLVN 408
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
L+ L+L +T V GL HL+G+ L + L T ++ L L GLS+L+ L LD +
Sbjct: 409 LERLDLGNTAVSDEGLEHLAGMVRLRELELHHTRVTRHGLEHLQGLSALEILELDHTDVV 468
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNV 421
D G+A L L L L L ITD G A+L A L+ L LN+
Sbjct: 469 DEGVAHLAKLGALRELRLDNTLITDVGVAHL------------------AKLSDLERLNL 510
Query: 422 SNSRITSAGLRHLKPLKNLRSLTLESCKV 450
+N+ +TS G+ L L L + L +
Sbjct: 511 ANTVVTSEGVEVLSALPRLEVVNLAGTRA 539
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 139/285 (48%), Gaps = 25/285 (8%)
Query: 98 GLEHL-------RGLSNLTSLSFRRNNAITA----------QGMKAFAGLINLVKLDLER 140
GL+HL +G SN TS + R+ I +G+ L L L+LER
Sbjct: 262 GLDHLHRIEWSGQGWSN-TSPQYLRDLPIDELICDCPRFGDRGLFMLRYLEGLQVLELER 320
Query: 141 CTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD---SGI 197
GLV+L LE L ++ C+ ++ L+ L L+ L + + + D G+
Sbjct: 321 SAVTSAGLVHLAENPALEDLTLRGCDLDSEG-FTALAALPRLRRLIVGPASLLDGKAEGL 379
Query: 198 AYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
L L++L L L+G AA L+ L +L L+L +SD+G E + + L+ L
Sbjct: 380 GLLVSLRELE-LGLDGFGDRAA--QELAPLVNLERLDLGNTAVSDEGLEHLAGMVRLREL 436
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGL 317
L +T L HL+GL+ LE L LD + DEG+ +L L L+ L L +T + G+
Sbjct: 437 ELHHTRVTRHGLEHLQGLSALEILELDHTDVVDEGVAHLAKLGALRELRLDNTLITDVGV 496
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
HL+ L++LE +NL+ T ++ + L+ L L+ +NL + D
Sbjct: 497 AHLAKLSDLERLNLANTVVTSEGVEVLSALPRLEVVNLAGTRARD 541
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 115/251 (45%), Gaps = 27/251 (10%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
++L S VT +GL+HL + L+ L C + +
Sbjct: 316 LELERSAVTSAGLVHLAENPALEDLTLRGC--------------------------DLDS 349
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
+G A A L L +L + + + G L L+ L L + + D + L+ L N
Sbjct: 350 EGFTALAALPRLRRLIVGPASLLDGKAEGLGLLVSLRELELG-LDGFGDRAAQELAPLVN 408
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
L+ L + + V+D G+ +L G+ +L L L VT L+ L L +L L L+ +
Sbjct: 409 LERLDLGNTAVSDEGLEHLAGMVRLRELELHHTRVTRHGLEHLQGLSALEILELDHTDVV 468
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
D+G +K+G+L+ L L ITD + HL L++LE LNL + + EG+ L+ L
Sbjct: 469 DEGVAHLAKLGALRELRLDNTLITDVGVAHLAKLSDLERLNLANTVVTSEGVEVLSALPR 528
Query: 302 LKCLELSDTQV 312
L+ + L+ T+
Sbjct: 529 LEVVNLAGTRA 539
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 136/358 (37%), Gaps = 59/358 (16%)
Query: 156 KLESLNIKWCNCITDSDMKPLSG-LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG- 213
+L +L I C + + L L+ + I VT + ++ L GL L L +
Sbjct: 122 RLTALRISGCQGAVHAGLSAFGARLRELELVDIELDAVTVARLSQLHGLDTLILTRVRAE 181
Query: 214 -------------CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCE-------KFSKIGS 253
VT LD SA+ L L + L +G + +K S
Sbjct: 182 AEALNPLARKISPSTVTLRELDKDSAVVELVTLLRDLHHLRLEGAWVGHNTMLRVAKAKS 241
Query: 254 LKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG-----------------------IGD 290
L+ L + +T+ L LKGL +L + G GD
Sbjct: 242 LQSLAVIDTALTNYSLHPLKGLDHLHRIEWSGQGWSNTSPQYLRDLPIDELICDCPRFGD 301
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
GL L L L+ LEL + V S+GL HL+ LE + L + LA L L
Sbjct: 302 RGLFMLRYLEGLQVLELERSAVTSAGLVHLAENPALEDLTLRGCDLDSEGFTALAALPRL 361
Query: 351 KSLNLDARQITD---TGLAALTSLTGLT-HLDLFGARITDSGAAYLRNFKNLRSLEICGG 406
+ L + + D GL L SL L LD FG D A L NL L++
Sbjct: 362 RRLIVGPASLLDGKAEGLGLLVSLRELELGLDGFG----DRAAQELAPLVNLERLDLGNT 417
Query: 407 GLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
++D AG+ L L + ++R+T GL HL+ L L L L+ V + L
Sbjct: 418 AVSDEGLEHLAGMVRLRELELHHTRVTRHGLEHLQGLSALEILELDHTDVVDEGVAHL 475
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 44/193 (22%)
Query: 22 EVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCS 81
E+ L+ F D A Q+L P VN L +DL + V+D GL HL
Sbjct: 389 ELGLDGFGDRAAQELA----PLVN-------------LERLDLGNTAVSDEGLEHLAGMV 431
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC 141
L+ L+ + +++ GLEHL+GLS L L + + G+ +L KL R
Sbjct: 432 RLRELELHHT-RVTRHGLEHLQGLSALEILELDHTDVVD-------EGVAHLAKLGALRE 483
Query: 142 TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLK 201
R+ L ITD + L+ L++L+ L ++ + VT G+ L
Sbjct: 484 LRLDNTL-------------------ITDVGVAHLAKLSDLERLNLANTVVTSEGVEVLS 524
Query: 202 GLQKLTLLNLEGC 214
L +L ++NL G
Sbjct: 525 ALPRLEVVNLAGT 537
>gi|168701212|ref|ZP_02733489.1| hypothetical protein GobsU_16936 [Gemmata obscuriglobus UQM 2246]
Length = 410
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 147/296 (49%), Gaps = 21/296 (7%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-----------V 216
+TD + L+G NL L+++ + +TD+G+ +L L L+ L+L G +
Sbjct: 114 VTDQKLAELAGQPNLVVLRLNGASITDAGLKHLAALDGLSALSLHGTSRGATSAGSYRGI 173
Query: 217 TAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT 276
T A L+ L A+ L L+L +++D G + + L+VL L +ITD L +L LT
Sbjct: 174 TDAGLNELRAIKGLTDLSLGGIEVTDAGARTLATMPQLRVLGLEGTKITDAALENLAPLT 233
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
L ++L + D GL +L L + LS T V +G+R L+ L L ++LS+T
Sbjct: 234 ELTEIDLTFTKVTDAGLKHLARFKKLTRVRLSSTAVTDAGVRELAALPELTDLDLSYTKA 293
Query: 337 SDGSLRKLAGLSS-LKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF 395
DG + LA + L S++L+ ++ D G AL + GLT L+L R+ D G + L
Sbjct: 294 GDGGVTALAAAPNRLTSVSLEKTRVGDEGAKALAAAPGLTRLNLGYTRVGDDGVSALAAA 353
Query: 396 KNLRSLEICGGGLTDAGLTGLVS------LNVSNSRITSAGLRHL---KPLKNLRS 442
NL L + +TD G+ L + + + + +T +R L +P LRS
Sbjct: 354 PNLTGLTLVATRVTDDGVRSLFACRKLAYVELRETEVTDGAIRELLKARPGCRLRS 409
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 139/299 (46%), Gaps = 15/299 (5%)
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
++ +T Q + AG NLV L L + GL +L L L +L+
Sbjct: 111 HHDVTDQKLAELAGQPNLVVLRLNGASITDAGLKHLAALDGLSALS-------------- 156
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L G + + S +TD+G+ L+ ++ LT L+L G VT A +L+ + L L L
Sbjct: 157 LHGTSRGATSAGSYRGITDAGLNELRAIKGLTDLSLGGIEVTDAGARTLATMPQLRVLGL 216
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
+++D E + + L ++L F ++TD L HL L + L S + D G+
Sbjct: 217 EGTKITDAALENLAPLTELTEIDLTFTKVTDAGLKHLARFKKLTRVRLSSTAVTDAGVRE 276
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTN-LESINLSFTGISDGSLRKLAGLSSLKSLN 354
L L L L+LS T+ G G+ L+ N L S++L T + D + LA L LN
Sbjct: 277 LAALPELTDLDLSYTKAGDGGVTALAAAPNRLTSVSLEKTRVGDEGAKALAAAPGLTRLN 336
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL 413
L ++ D G++AL + LT L L R+TD G L + L +E+ +TD +
Sbjct: 337 LGYTRVGDDGVSALAAAPNLTGLTLVATRVTDDGVRSLFACRKLAYVELRETEVTDGAI 395
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 141/312 (45%), Gaps = 38/312 (12%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQ---------- 93
V D+ + +A Q +L+ + L+G+ +TD+GL HL L +L + +
Sbjct: 114 VTDQKLAELAGQ-PNLVVLRLNGASITDAGLKHLAALDGLSALSLHGTSRGATSAGSYRG 172
Query: 94 ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG 153
I+D GL LR + LT LS +T G + A + L L LE
Sbjct: 173 ITDAGLNELRAIKGLTDLSL-GGIEVTDAGARTLATMPQLRVLGLE-------------- 217
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
ITD+ ++ L+ LT L + ++ +KVTD+G+ +L +KLT + L
Sbjct: 218 -----------GTKITDAALENLAPLTELTEIDLTFTKVTDAGLKHLARFKKLTRVRLSS 266
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGS-LKVLNLGFNEITDECLVHL 272
VT A + L+AL L L+L+ + D G + + L ++L + DE L
Sbjct: 267 TAVTDAGVRELAALPELTDLDLSYTKAGDGGVTALAAAPNRLTSVSLEKTRVGDEGAKAL 326
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
L LNL +GD+G+ L NL L L T+V G+R L L + L
Sbjct: 327 AAAPGLTRLNLGYTRVGDDGVSALAAAPNLTGLTLVATRVTDDGVRSLFACRKLAYVELR 386
Query: 333 FTGISDGSLRKL 344
T ++DG++R+L
Sbjct: 387 ETEVTDGAIREL 398
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 129/281 (45%), Gaps = 20/281 (7%)
Query: 185 LQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
L ++ VTD +A L G L +L L G +T A L L+AL L L+L+
Sbjct: 107 LSLAHHDVTDQKLAELAGQPNLVVLRLNGASITDAGLKHLAALDGLSALSLHGTS----- 161
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
+ GS + ITD L L+ + L L+L + D G L + L+
Sbjct: 162 -RGATSAGS-------YRGITDAGLNELRAIKGLTDLSLGGIEVTDAGARTLATMPQLRV 213
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 364
L L T++ + L +L+ LT L I+L+FT ++D L+ LA L + L + +TD G
Sbjct: 214 LGLEGTKITDAALENLAPLTELTEIDLTFTKVTDAGLKHLARFKKLTRVRLSSTAVTDAG 273
Query: 365 LAALTSLTGLTHLDLFGARITDSGAAYLRNFKN-LRSLEICGGGLTDAG------LTGLV 417
+ L +L LT LDL + D G L N L S+ + + D G GL
Sbjct: 274 VRELAALPELTDLDLSYTKAGDGGVTALAAAPNRLTSVSLEKTRVGDEGAKALAAAPGLT 333
Query: 418 SLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
LN+ +R+ G+ L NL LTL + +VT + ++ L
Sbjct: 334 RLNLGYTRVGDDGVSALAAAPNLTGLTLVATRVTDDGVRSL 374
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 109/237 (45%), Gaps = 20/237 (8%)
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
F L+L ++D + + +L VL L ITD L HL L L +L+L G
Sbjct: 105 FGLSLAHHDVTDQKLAELAGQPNLVVLRLNGASITDAGLKHLAALDGLSALSLHGTSRGA 164
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
+ G+ T G + LR + GLT+L +L ++D R LA + L
Sbjct: 165 TSAGSYRGI----------TDAGLNELRAIKGLTDL---SLGGIEVTDAGARTLATMPQL 211
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
+ L L+ +ITD L L LT LT +DL ++TD+G +L FK L + + +TD
Sbjct: 212 RVLGLEGTKITDAALENLAPLTELTEIDLTFTKVTDAGLKHLARFKKLTRVRLSSTAVTD 271
Query: 411 AG------LTGLVSLNVSNSRITSAGLRHLKPLKN-LRSLTLESCKVTANDIKRLQS 460
AG L L L++S ++ G+ L N L S++LE +V K L +
Sbjct: 272 AGVRELAALPELTDLDLSYTKAGDGGVTALAAAPNRLTSVSLEKTRVGDEGAKALAA 328
>gi|329906145|ref|ZP_08274368.1| hypothetical protein IMCC9480_2835 [Oxalobacteraceae bacterium
IMCC9480]
gi|327547327|gb|EGF32161.1| hypothetical protein IMCC9480_2835 [Oxalobacteraceae bacterium
IMCC9480]
Length = 518
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 164/310 (52%), Gaps = 10/310 (3%)
Query: 54 SQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLS 112
Q +L +DL+ + + ++ L+HL +LQ L+ + C Q++D G+ HL S L L
Sbjct: 186 PQMPALQVLDLTACTTIAEANLVHLAKLPDLQQLNLSSCQQLTDAGVAHLPLASTLQHLD 245
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
+T G++ + L +L LD+ C + G + +MK SLN +C +D+
Sbjct: 246 LSGCQQVTDAGLRGLSALRSLQHLDVHSCRLVTGATLGDFAVMK--SLNAGFCRRFSDAG 303
Query: 173 MKPLSGLTNLKSLQIS-CSKVTDSGIAY-LKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
+ ++G+ +L+ L+I+ C +T +A L L +L LN G P++ A L +L A GSL
Sbjct: 304 LAAVAGMHDLQQLEITHCVALTRDALATCLPQLTQLQTLNASGTPLSDAPLQALFAQGSL 363
Query: 231 FYLNLNRCQ-LSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-G 287
L L C+ L++ G + + +L L+L + + L L T LE+L+L C G
Sbjct: 364 QQLVLQHCRALTEPGLAQLATSPALVSLDLRSCRGVVGDALPALGRQTALETLDLSRCSG 423
Query: 288 IGDEGLVNLTGLCNLKCLELSDT-QVGSSGLRHLSGLTNLESINLSFTG-ISDGSLRKLA 345
+ + L + L L+ L L ++ +GL HL L L++++L+ G ++DG+LR++A
Sbjct: 424 VTGDDLRHFQSLSKLQTLRLVGCGRINDAGLAHLQALPALKTLDLTDCGYLTDGALRRIA 483
Query: 346 GLSSLKSLNL 355
+L+ L++
Sbjct: 484 HFPALEKLHI 493
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 201/454 (44%), Gaps = 88/454 (19%)
Query: 58 SLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISD------------GGLE---- 100
S+ ++LSG + +TD+GL HL +L+ +D CIQ++D LE
Sbjct: 43 SVRRLELSGNTRLTDAGLAHLAGLLSLEHVDLRSCIQVTDAGLATLAALPALHTLELAEQ 102
Query: 101 ------HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE-RCTRIHGGLVNLKG 153
L + L L+ +R IT ++A A NL L++ R L +L+
Sbjct: 103 RDASGAALAQMPQLRHLTLQRCQGITPAALEAVANQANLQHLEISLRRNMTDDELASLRP 162
Query: 154 LMKLESLNIK------------W-------------CNCITDSDMKPLSGLTNLKSLQI- 187
L++L L++ W C I ++++ L+ L +L+ L +
Sbjct: 163 LLQLRHLSLNGSSGFSGSGLEDWPQMPALQVLDLTACTTIAEANLVHLAKLPDLQQLNLS 222
Query: 188 SCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQLSDDGCE 246
SC ++TD+G+A+L L L+L GC VT A L LSAL SL +L+++ C+L
Sbjct: 223 SCQQLTDAGVAHLPLASTLQHLDLSGCQQVTDAGLRGLSALRSLQHLDVHSCRLVTGA-- 280
Query: 247 KFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
+K LN GF +D L + G+ +L+ L + C V LT C
Sbjct: 281 TLGDFAVMKSLNAGFCRRFSDAGLAAVAGMHDLQQLEITHC-------VALTRDALATC- 332
Query: 306 ELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTG 364
L LT L+++N S T +SD L+ L SL+ L L R +T+ G
Sbjct: 333 --------------LPQLTQLQTLNASGTPLSDAPLQALFAQGSLQQLVLQHCRALTEPG 378
Query: 365 LAALTSLTGLTHLDLFGAR--ITDSGAAYLRNFKNLRSLEI--CGGGLTD-----AGLTG 415
LA L + L LDL R + D+ A R L +L++ C G D L+
Sbjct: 379 LAQLATSPALVSLDLRSCRGVVGDALPALGRQ-TALETLDLSRCSGVTGDDLRHFQSLSK 437
Query: 416 LVSLN-VSNSRITSAGLRHLKPLKNLRSLTLESC 448
L +L V RI AGL HL+ L L++L L C
Sbjct: 438 LQTLRLVGCGRINDAGLAHLQALPALKTLDLTDC 471
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Query: 14 LVYSRCLTEVSLEAFR-DCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTD 71
L + R LTE L AL L L GV + + Q ++L ++DLS S VT
Sbjct: 368 LQHCRALTEPGLAQLATSPALVSLDLRSCRGVVGDALPALGRQ-TALETLDLSRCSGVTG 426
Query: 72 SGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLI 131
L H + S LQ+L C +I+D GL HL+ L L +L +T ++ A
Sbjct: 427 DDLRHFQSLSKLQTLRLVGCGRINDAGLAHLQALPALKTLDLTDCGYLTDGALRRIAHFP 486
Query: 132 NLVKLDLERCTRI 144
L KL + C I
Sbjct: 487 ALEKLHIRNCHLI 499
>gi|46445969|ref|YP_007334.1| hypothetical protein pc0335 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399610|emb|CAF23059.1| hypothetical protein pc0335 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 642
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 168/324 (51%), Gaps = 11/324 (3%)
Query: 66 GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMK 125
+ +TD+ L+ LK+C NL+ L C +D GL HL L L L+ +T G+
Sbjct: 314 NAHLTDAQLLTLKNCKNLKVLQLQACHNFTDAGLAHLTPLMALQHLNLSYCKNLTDAGLA 373
Query: 126 AFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A L+ L L+L C + GL +L L+ L LN+ WCN +TD+ + L+ L L
Sbjct: 374 HLAPLVVLQHLNLSSCHNLTDAGLAHLTPLVALTHLNLSWCNKLTDAGLAHLTPLVALTH 433
Query: 185 LQI-SCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QLS 241
L + C K+T+ G+A+L L L L+L C +T A L LS+L +L +L L C L+
Sbjct: 434 LDLRECDKLTNRGLAHLALLLTLQYLDLNYCRNLTDAGLAHLSSLVALQHLKLCCCVSLT 493
Query: 242 DDGCEKFSKIGSLKVLNLG--FNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTG 298
D G + + +L L+L FN ITD L HL L L+ L L C + D GL +LT
Sbjct: 494 DAGLAHLAPLVALTHLDLSWCFN-ITDAGLAHLTPLVTLQHLGLSGCRRLTDVGLAHLTR 552
Query: 299 LCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLD 356
L L+ L L+ + +GL HL+ L NL+ ++LS +++ L L L +L+ L+L
Sbjct: 553 LVALQHLGLNRCDNLTDAGLAHLTPLINLQHLDLSECRKLTNAGLAHLTPLVALQRLDLR 612
Query: 357 -ARQITDTGLAALTSLTGLTHLDL 379
++T LA L HLDL
Sbjct: 613 CCNKLTGARLAHFKFLVAKPHLDL 636
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 120/316 (37%), Positives = 164/316 (51%), Gaps = 29/316 (9%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
++E+LN +TD+ + L NLK LQ+ +C TD+G+A+L L L LNL C
Sbjct: 305 EIEALNFSKNAHLTDAQLLTLKNCKNLKVLQLQACHNFTDAGLAHLTPLMALQHLNLSYC 364
Query: 215 P-VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGF-NEITDECLVH 271
+T A L L+ L L +LNL+ C L+D G + + +L LNL + N++TD L H
Sbjct: 365 KNLTDAGLAHLAPLVVLQHLNLSSCHNLTDAGLAHLTPLVALTHLNLSWCNKLTDAGLAH 424
Query: 272 LKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLK------CLELSDTQVGSSGLRHLSGLT 324
L L L L+L C + + GL +L L L+ C L+D +GL HLS L
Sbjct: 425 LTPLVALTHLDLRECDKLTNRGLAHLALLLTLQYLDLNYCRNLTD-----AGLAHLSSLV 479
Query: 325 NLESINLSF-TGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLTGLTHLDLFGA 382
L+ + L ++D L LA L +L L+L ITD GLA LT L L HL L G
Sbjct: 480 ALQHLKLCCCVSLTDAGLAHLAPLVALTHLDLSWCFNITDAGLAHLTPLVTLQHLGLSGC 539
Query: 383 R-ITDSGAAYLRNFKNLRSLEI--CGGGLTDAGLTGLVSL------NVSNSR-ITSAGLR 432
R +TD G A+L L+ L + C LTDAGL L L ++S R +T+AGL
Sbjct: 540 RRLTDVGLAHLTRLVALQHLGLNRCDN-LTDAGLAHLTPLINLQHLDLSECRKLTNAGLA 598
Query: 433 HLKPLKNLRSLTLESC 448
HL PL L+ L L C
Sbjct: 599 HLTPLVALQRLDLRCC 614
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
Query: 58 SLLSVDLSGS-DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+L +DLS ++TD+GL HL LQ L + C +++D GL HL L L L R
Sbjct: 505 ALTHLDLSWCFNITDAGLAHLTPLVTLQHLGLSGCRRLTDVGLAHLTRLVALQHLGLNRC 564
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+ +T G+ LINL LDL C ++ + GL +L L+ L+ L+++ CN +T + +
Sbjct: 565 DNLTDAGLAHLTPLINLQHLDLSECRKLTNAGLAHLTPLVALQRLDLRCCNKLTGARLAH 624
Query: 176 LSGLTNLKSLQISCSK 191
L L + K
Sbjct: 625 FKFLVAKPHLDLRWYK 640
>gi|42567079|ref|NP_194115.3| leucine-rich repeat-containing protein [Arabidopsis thaliana]
gi|20466546|gb|AAM20590.1| unknown protein [Arabidopsis thaliana]
gi|22136448|gb|AAM91302.1| unknown protein [Arabidopsis thaliana]
gi|51971383|dbj|BAD44356.1| putative protein [Arabidopsis thaliana]
gi|332659411|gb|AEE84811.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 135/458 (29%), Positives = 194/458 (42%), Gaps = 126/458 (27%)
Query: 111 LSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGG-LVNLKGLMKLESLNIKWCNCIT 169
+ R +++ A+ M G +NL+ L+L C RI+ L + GL L L++ C +T
Sbjct: 66 IDLRGKSSVNAEWMAYIGGFVNLITLNLSDCQRINSSTLWPITGLTSLTELDLSRCFKVT 125
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
D+ MK L + NLK L IS + VT+ GI+ L L+KL+LL+L G PVT L SL AL
Sbjct: 126 DAGMKHLQSVVNLKKLWISQTGVTEVGISLLASLKKLSLLDLGGLPVTDQNLISLQALTK 185
Query: 230 LFYL-------------------NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
L YL NL+ LS + I L+ L++ I E
Sbjct: 186 LEYLDIWGSNVTNQGAVSILKFSNLSFLNLSWTSITQTPNIPHLECLHMNTCTIVSEPKT 245
Query: 271 H----------------------------------------------LKGLTNLESLNLD 284
H L+ + NLE L+L
Sbjct: 246 HSSLASLKKLVLSGANFSAETESLSFTNKSCITYLDVSKTSLKNFSFLETMFNLEHLDLS 305
Query: 285 SCGIGDE--GLVNLTGLCNLKCLELSDTQVGSSGLRHLSG-LTNLESINLSFTGISD--- 338
S GD+ G V G NLK L +SDTQ+ SG+ +L+G + LE++++S T + D
Sbjct: 306 STAFGDDSVGFVACVG-ENLKNLNVSDTQITPSGVGNLAGHVPQLETLSMSQTFVDDLSI 364
Query: 339 ----------------------------------GSLRKLAGLSSLKSLNLDARQITDTG 364
SL L L+SL++L+L+ + D
Sbjct: 365 LLISTTMPCIKALDLGMNSTLGFYYLISPQEEKEKSLAALQSLTSLETLSLEHPYLGDKA 424
Query: 365 LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNS 424
L+ L+SLTGLTHL L +TDS +L + N LVSL V +
Sbjct: 425 LSGLSSLTGLTHLSLTSTSLTDSTLHHLSSLPN------------------LVSLGVRDG 466
Query: 425 RITSAGLRHLKPLKNLRSLTLESCK-VTANDIKRLQSR 461
+TS GL +P LR+L L+ C +T +DI L R
Sbjct: 467 VLTSNGLEKFRPPNRLRTLDLQGCWLLTKDDIAGLCKR 504
>gi|290977067|ref|XP_002671260.1| predicted protein [Naegleria gruberi]
gi|284084827|gb|EFC38516.1| predicted protein [Naegleria gruberi]
Length = 378
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 179/381 (46%), Gaps = 31/381 (8%)
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC 141
NLQSLDF+ + LS+ N +T G+KA A L L K++ R
Sbjct: 3 NLQSLDFS----------------TTTNELSYNHNYIVT-NGLKAIAELKQLKKINFHRN 45
Query: 142 TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLK 201
GL + +L L+I CN I K +S L LK L I+ + + D G Y+
Sbjct: 46 QIGQNGLQTISQFNQLLCLDIS-CNGIGIEGAKAVSELNQLKELDITANDIGDIGAKYIS 104
Query: 202 GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF 261
+++LT L + + + S+ L L LN++ + D+G + S + L L++
Sbjct: 105 QMKELTKLYVRYNDINSQGASSIGELHQLTKLNISYNNIGDEGMKVISGMKHLTKLSVHN 164
Query: 262 NEI---TDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
N I + + + +K LTNL ++ IG EG+ ++ L L L++S Q+G+ G
Sbjct: 165 NHINVGSSQFISQMKQLTNL---SISENHIGIEGVETISQLSQLTRLKISSNQIGARGAI 221
Query: 319 HLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 378
+S L L +++ I+D L+ L L L L D QI + G+ ++ L LT LD
Sbjct: 222 LISKLDKLTKLSIGSNRINDEGLKSLCRLKHLTKLKADFNQIGNEGVKSIIQLKQLTFLD 281
Query: 379 LFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLR 432
+ G I+ GA ++ K LR+L I + + G LT L L++ + ++ G++
Sbjct: 282 IGGNNISHKGAQFINQLKQLRTLYISENQIGNKGAKLISELTQLRILHIRKNELSDEGVK 341
Query: 433 HLKPLKNLRSLTL-ESCKVTA 452
+ +K L L L E+ +T
Sbjct: 342 SILLMKQLTELDLRENYDITV 362
>gi|254411467|ref|ZP_05025244.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196181968|gb|EDX76955.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 577
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 142/423 (33%), Positives = 215/423 (50%), Gaps = 49/423 (11%)
Query: 45 NDKWMDVIASQG-SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
N++ +DV G ++L ++L + +T+ L L + + L L N ++ +L
Sbjct: 189 NNQIIDVTPLSGLANLTELNLYNNQITEVSLSGLTNLTELY-LSNNQITEV------NLS 241
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
GL+NL L N I + +GL NL +LDL + +I + L GL L L++K
Sbjct: 242 GLTNLRRLYLSTNQII---DISPLSGLTNLTELDL-KYNQIKD-VSPLSGLTNLTELDLK 296
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
+ D+ PLSGLTNL L +S +++ D I+ L GL LTLL L + +
Sbjct: 297 YNQI---KDVSPLSGLTNLTGLYLSSNQIKD--ISPLSGLTNLTLLYLSDNKI--KDISP 349
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
LS L +L L+L ++ D S + +L L+L N+I D + L GLTNL +L
Sbjct: 350 LSGLINLTGLDLGSNKIKD--ISPLSGLINLTGLDLSSNKIKD--ISPLSGLTNLTWFSL 405
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
D+ I + V+L+GL NL L L + Q+ + + LS LTNL + L+ I+D S
Sbjct: 406 DNNQITE---VSLSGLTNLTELYLRNNQI--TDVSSLSELTNLTRLVLNNNQITDVS--P 458
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
L+GL++L LNL QITD L+ LT+ LT L+L +ITD + L NL L +
Sbjct: 459 LSGLTNLTVLNLSNNQITDVSLSGLTN---LTVLNLSNNQITD--VSPLSGLTNLTGLNL 513
Query: 404 CGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL-------ESCKVTA 452
+TD +GLT L L +SN++I + L L NLR L L ++C V+
Sbjct: 514 ISNQITDVSILSGLTNLTVLILSNNQI--KDVSPLSGLTNLRRLYLGDNPIPQQTCPVSP 571
Query: 453 NDI 455
D+
Sbjct: 572 PDV 574
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 138/419 (32%), Positives = 193/419 (46%), Gaps = 84/419 (20%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
QI D + L L+NLT L+ N + + + L NL +L+L +I + L
Sbjct: 103 QIKD--VTPLSELTNLTELNLYNNQI---KDVTPLSELTNLTELNLYN-NQIKD-VTPLS 155
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
GL+ L L I + N ITD + PLSGLTNL L + +++ D + L GL LT LNL
Sbjct: 156 GLINLTRL-ILFSNQITD--ITPLSGLTNLTELSLDNNQIID--VTPLSGLANLTELNLY 210
Query: 213 GCPVTAACLDSLSALGSLF-------------YLNLNRCQLSDD---GCEKFSKIGSLKV 256
+T L L+ L L+ NL R LS + S + +L
Sbjct: 211 NNQITEVSLSGLTNLTELYLSNNQITEVNLSGLTNLRRLYLSTNQIIDISPLSGLTNLTE 270
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD----EGLVNLT--------------- 297
L+L +N+I D + L GLTNL L+L I D GL NLT
Sbjct: 271 LDLKYNQIKD--VSPLSGLTNLTELDLKYNQIKDVSPLSGLTNLTGLYLSSNQIKDISPL 328
Query: 298 -GLCNLKCLELSDTQV-----------------GSSGLR---HLSGLTNLESINLSFTGI 336
GL NL L LSD ++ GS+ ++ LSGL NL ++LS I
Sbjct: 329 SGLTNLTLLYLSDNKIKDISPLSGLINLTGLDLGSNKIKDISPLSGLINLTGLDLSSNKI 388
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
D + L+GL++L +LD QIT+ +L+ LT LT L L +ITD + L
Sbjct: 389 KD--ISPLSGLTNLTWFSLDNNQITE---VSLSGLTNLTELYLRNNQITD--VSSLSELT 441
Query: 397 NLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
NL L + +TD +GLT L LN+SN++IT L L NL L L + ++T
Sbjct: 442 NLTRLVLNNNQITDVSPLSGLTNLTVLNLSNNQITDVSLSG---LTNLTVLNLSNNQIT 497
>gi|54294508|ref|YP_126923.1| hypothetical protein lpl1579 [Legionella pneumophila str. Lens]
gi|53754340|emb|CAH15819.1| hypothetical protein lpl1579 [Legionella pneumophila str. Lens]
Length = 464
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 172/376 (45%), Gaps = 4/376 (1%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
+ D+ +A+ SL +++L +++ D G L +L +L+ ++ I G + L
Sbjct: 56 IGDEGAKALAAN-QSLSTLNLRANNIGDEGAKALAANQSLSTLNLSYN-NIGAEGAKALA 113
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
+L++L+ R NN I +G KA A +L L+L G L L +LN++
Sbjct: 114 ANQSLSTLNLRANN-IGDEGAKALAANQSLSTLNLRYNNIGDEGAKALAANQSLSTLNLR 172
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
N I D K L+ +L +L +S + + G L Q L+ LNL + A +
Sbjct: 173 -NNNIGDEGAKALAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNLRYNNIRAEGAKA 231
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
L+A SL LNL+ + D+G + + SL LNL +N I DE L +L +LNL
Sbjct: 232 LAANQSLSTLNLSYNNIGDEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQSLSTLNL 291
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
IGDEG L +L L LS + + G + L+ +L ++NLS+ I D +
Sbjct: 292 SYNNIGDEGAKALAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNLSYNNIGDEGAKA 351
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
LA SL +LNL I G AL + L+ L+L I D GA L L+
Sbjct: 352 LAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNLSYNNIGDEGAKALNETDPLKRANY 411
Query: 404 CGGGLTDAGLTGLVSL 419
D G+ L L
Sbjct: 412 GREAGMDTGVPSLARL 427
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 142/296 (47%), Gaps = 7/296 (2%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 215
+++SLN++ N I D K L+ +L +L + + + D G L Q L+ LNL
Sbjct: 45 EIKSLNLR-NNNIGDEGAKALAANQSLSTLNLRANNIGDEGAKALAANQSLSTLNLSYNN 103
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
+ A +L+A SL LNL + D+G + + SL LNL +N I DE L
Sbjct: 104 IGAEGAKALAANQSLSTLNLRANNIGDEGAKALAANQSLSTLNLRYNNIGDEGAKALAAN 163
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 335
+L +LNL + IGDEG L +L L LS + + G + L+ +L ++NL +
Sbjct: 164 QSLSTLNLRNNNIGDEGAKALAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNLRYNN 223
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF 395
I + LA SL +LNL I D G AL + L+ L+L I D GA L
Sbjct: 224 IRAEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQSLSTLNLSYNNIGDEGAKALAAN 283
Query: 396 KNLRSLEICGGGLTDAGLTGLVS------LNVSNSRITSAGLRHLKPLKNLRSLTL 445
++L +L + + D G L + LN+S + I + G + L ++L +L L
Sbjct: 284 QSLSTLNLSYNNIGDEGAKALAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNL 339
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 6/271 (2%)
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NL + +++ + + + +L ++ LNL + +L+A SL LNL +
Sbjct: 21 NLSNQKLNAQDIKELIVPFLNTNPEIKSLNLRNNNIGDEGAKALAANQSLSTLNLRANNI 80
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D+G + + SL LNL +N I E L +L +LNL + IGDEG L
Sbjct: 81 GDEGAKALAANQSLSTLNLSYNNIGAEGAKALAANQSLSTLNLRANNIGDEGAKALAANQ 140
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
+L L L +G G + L+ +L ++NL I D + LA SL +LNL I
Sbjct: 141 SLSTLNLRYNNIGDEGAKALAANQSLSTLNLRNNNIGDEGAKALAANQSLSTLNLSYNNI 200
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS-- 418
G AL + L+ L+L I GA L ++L +L + + D G L +
Sbjct: 201 RAEGAKALAANQSLSTLNLRYNNIRAEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQ 260
Query: 419 ----LNVSNSRITSAGLRHLKPLKNLRSLTL 445
LN+S + I G + L ++L +L L
Sbjct: 261 SLSTLNLSYNNIGDEGAKALAANQSLSTLNL 291
>gi|434405931|ref|YP_007148816.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
gi|428260186|gb|AFZ26136.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
Length = 451
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 214/415 (51%), Gaps = 49/415 (11%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
++L S+++D + L + +NL +LD +S+ + ++ LSNLT+L+ ++
Sbjct: 76 LNLESSEISD--IKPLSNLTNLTTLD------LSENQISDIKPLSNLTNLTDIDLSSNQI 127
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
+K + L NL +DL + + ++K L L +L + + SD+K LS LTN
Sbjct: 128 SDIKVLSNLTNLTDIDLSK-----NQISDIKVLSNLTNLTVLDLSDNQISDIKVLSNLTN 182
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
L S+++S ++++D I L L LT+L+L ++ + LS L +L YL+L Q+
Sbjct: 183 LTSVKLSENQISD--IEVLSNLTNLTVLDLGYNQISDIKV--LSNLTNLTYLSLWNNQIG 238
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
D + S + +L L+L N+I+D + L LTNL SL L I D + L+ L N
Sbjct: 239 D--IKVLSNLTNLTSLSLWDNQISD--IKPLSNLTNLTSLYLWDNQISD--IKPLSNLTN 292
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
L L L D Q+ ++ LS LTNL ++LS I G ++ L+ L+SL SL+L QI
Sbjct: 293 LTYLYLWDNQIA--DIKPLSNLTNLTDLDLSKNQI--GDIKPLSNLTSLTSLDLSKNQIA 348
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLV 417
D + L++LT LT L L+ + D L N NL SL++ ++D + LT L
Sbjct: 349 D--IKPLSNLTNLTSLSLWRNQSID--IELLSNLTNLTSLDLSENQISDIKPLSNLTNLT 404
Query: 418 SLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFRPE 472
+++S ++I+ +KPL NL LE ++ N I L + F PE
Sbjct: 405 DIDLSENQIS-----DIKPLSNLTK--LEDLQIQNNPI-------LDKICPFIPE 445
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 34/160 (21%)
Query: 48 WMDVIA-----SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
W + IA S ++L +DLS + + D + L + ++L SLD + QI+D ++ L
Sbjct: 299 WDNQIADIKPLSNLTNLTDLDLSKNQIGD--IKPLSNLTSLTSLDLSKN-QIAD--IKPL 353
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
L+NLTSLS RN +I ++ + L NL LDL + ++K L L +L
Sbjct: 354 SNLTNLTSLSLWRNQSI---DIELLSNLTNLTSLDLS-----ENQISDIKPLSNLTNL-- 403
Query: 163 KWCNCITD--------SDMKPLSGLTNLKSLQISCSKVTD 194
TD SD+KPLS LT L+ LQI + + D
Sbjct: 404 ------TDIDLSENQISDIKPLSNLTKLEDLQIQNNPILD 437
>gi|290981666|ref|XP_002673551.1| predicted protein [Naegleria gruberi]
gi|284087135|gb|EFC40807.1| predicted protein [Naegleria gruberi]
Length = 438
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 186/401 (46%), Gaps = 27/401 (6%)
Query: 56 GSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
G L S+++ + + + G+ +L +C L S + + IS G +L L LT+L R
Sbjct: 31 GIELTSIEIGYNRIGNEGVKYLSECKELTSANL-YGNNISAEGASYLTKLK-LTNLDIRT 88
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
N + A+G K L L L++ G L L +L +L I CN I + K
Sbjct: 89 N-ELGAEGAKFIGQLSQLKILNIGVNDICAEGAKYLVALNQLTNLGIN-CNRIGEEGAKS 146
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
+S + L +L IS + + ++G+ Y+ + LT L + + A + L L L++
Sbjct: 147 ISEMKQLTNLDISNNYIGETGVEYVSEMGNLTTLTIIENNLRAEGCKKIRKLKQLTRLSI 206
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
++ +G + S++ L L + N I +E ++ L NL L++ IG EG +
Sbjct: 207 YDNKIGAEGAKFISEMEQLMFLEINNNSIRNEGTEYISQLGNLTELDISHNEIGSEGAKH 266
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
++ L CL S ++ + +LS LT L + + + I D S++ + L SL L L
Sbjct: 267 ISQFKQLTCLRFSYNKINAESFEYLSTLTQLTDLRICSSSIGDDSIKSITNLKSLTILYL 326
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG 415
+ I+D G ++ LT LT L + I+D G +L + LT
Sbjct: 327 NGNNISDNGCKNISELTQLTDLSMALNNISDEGCKFL------------------SQLTQ 368
Query: 416 LVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIK 456
L L+VS +RI + G ++ +K L+ L ++ AN+I+
Sbjct: 369 LTELDVSYNRIGNIGAEYINEMKQLKHLAIQ-----ANNIR 404
>gi|290993170|ref|XP_002679206.1| leucine rich repeat protein [Naegleria gruberi]
gi|284092822|gb|EFC46462.1| leucine rich repeat protein [Naegleria gruberi]
Length = 527
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 148/317 (46%), Gaps = 21/317 (6%)
Query: 152 KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
K L+ ++SL C + K +S L L L I S + D G+ Y+ L++L L++
Sbjct: 93 KKLISMKSLTELIIKCDDEGSAKFISELKQLTRLTIDASHIRDEGVRYISELKQLAYLSV 152
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE---- 267
++ + L L L L + ++ +GC+ S++ L L + N I DE
Sbjct: 153 HSNDISDDGVKYLRELKQLTTLIIFSNRVGSEGCKCISELKQLTSLCIDDNHINDEGANN 212
Query: 268 --------CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
C+ LK LT SL +D I DEG L+ L L L++S +G+ G ++
Sbjct: 213 RVGSEGCKCISELKQLT---SLCIDDNHINDEGAKYLSELAQLTYLDISSNGLGNEGTKY 269
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
+S L LE +N+S I D L LS L SL L +I G L+ L LT LD+
Sbjct: 270 ISTLNQLEKLNISQNYIGDEGLEYFGKLSQLTSLELSNNKIGTEGAKYLSELKQLTQLDI 329
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRH 433
+I D GA Y K L +L I + + G L L+ L++S +RI + G+++
Sbjct: 330 EYNKIGDKGAMYFGELKQLVNLIINNNRIGNDGVKYIGELKQLIYLDISENRIGNEGIKY 389
Query: 434 LKPLKNLRSLTLESCKV 450
+ LK L + + ++
Sbjct: 390 IGELKQLTDVNISENRI 406
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 147/311 (47%), Gaps = 25/311 (8%)
Query: 167 CITDSDMKPLSGLTNLKSLQISCSKVTDSGIA-YLKGLQKLTLLNLEGCPVTAACLDSLS 225
C T+ K L + +L L I C D G A ++ L++LT L ++ + + +S
Sbjct: 86 CATNDTCKKLISMKSLTELIIKCD---DEGSAKFISELKQLTRLTIDASHIRDEGVRYIS 142
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE---CLVHLKGLTNLESLN 282
L L YL+++ +SDDG + ++ L L + N + E C+ LK LT SL
Sbjct: 143 ELKQLAYLSVHSNDISDDGVKYLRELKQLTTLIIFSNRVGSEGCKCISELKQLT---SLC 199
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLE---------LSDTQVGSSGLRHLSGLTNLESINLSF 333
+D I DEG N G KC+ + D + G ++LS L L +++S
Sbjct: 200 IDDNHINDEGANNRVGSEGCKCISELKQLTSLCIDDNHINDEGAKYLSELAQLTYLDISS 259
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
G+ + + ++ L+ L+ LN+ I D GL L+ LT L+L +I GA YL
Sbjct: 260 NGLGNEGTKYISTLNQLEKLNISQNYIGDEGLEYFGKLSQLTSLELSNNKIGTEGAKYLS 319
Query: 394 NFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 447
K L L+I + D G L LV+L ++N+RI + G++++ LK L L +
Sbjct: 320 ELKQLTQLDIEYNKIGDKGAMYFGELKQLVNLIINNNRIGNDGVKYIGELKQLIYLDISE 379
Query: 448 CKVTANDIKRL 458
++ IK +
Sbjct: 380 NRIGNEGIKYI 390
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 175/369 (47%), Gaps = 12/369 (3%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L + + S + D G+ ++ + L L + ISD G+++LR L LT+L
Sbjct: 118 SELKQLTRLTIDASHIRDEGVRYISELKQLAYLSVH-SNDISDDGVKYLRELKQLTTLII 176
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG---------LMKLESLNIKW 164
+N + ++G K + L L L ++ G N G L +L SL I
Sbjct: 177 F-SNRVGSEGCKCISELKQLTSLCIDDNHINDEGANNRVGSEGCKCISELKQLTSLCID- 234
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
N I D K LS L L L IS + + + G Y+ L +L LN+ + L+
Sbjct: 235 DNHINDEGAKYLSELAQLTYLDISSNGLGNEGTKYISTLNQLEKLNISQNYIGDEGLEYF 294
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
L L L L+ ++ +G + S++ L L++ +N+I D+ ++ L L +L ++
Sbjct: 295 GKLSQLTSLELSNNKIGTEGAKYLSELKQLTQLDIEYNKIGDKGAMYFGELKQLVNLIIN 354
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
+ IG++G+ + L L L++S+ ++G+ G++++ L L +N+S I + + +
Sbjct: 355 NNRIGNDGVKYIGELKQLIYLDISENRIGNEGIKYIGELKQLTDVNISENRIGNEGAKYI 414
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
LS L SL L I + G ++ L L +L + +I + GA Y+ K + L+I
Sbjct: 415 GQLSQLTSLYLSNNNIGNEGAKYISELKELIYLYMNNNKIRNEGAKYISEMKQVTQLDIG 474
Query: 405 GGGLTDAGL 413
+ + G+
Sbjct: 475 NNYIGEEGI 483
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 164/357 (45%), Gaps = 10/357 (2%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L + + +D++D G+ +L++ L +L F ++ G + + L LTSL
Sbjct: 142 SELKQLAYLSVHSNDISDDGVKYLRELKQLTTLII-FSNRVGSEGCKCISELKQLTSLCI 200
Query: 114 R--------RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC 165
NN + ++G K + L L L ++ G L L +L L+I
Sbjct: 201 DDNHINDEGANNRVGSEGCKCISELKQLTSLCIDDNHINDEGAKYLSELAQLTYLDIS-S 259
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N + + K +S L L+ L IS + + D G+ Y L +LT L L + LS
Sbjct: 260 NGLGNEGTKYISTLNQLEKLNISQNYIGDEGLEYFGKLSQLTSLELSNNKIGTEGAKYLS 319
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
L L L++ ++ D G F ++ L L + N I ++ + ++ L L L++
Sbjct: 320 ELKQLTQLDIEYNKIGDKGAMYFGELKQLVNLIINNNRIGNDGVKYIGELKQLIYLDISE 379
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
IG+EG+ + L L + +S+ ++G+ G +++ L+ L S+ LS I + + ++
Sbjct: 380 NRIGNEGIKYIGELKQLTDVNISENRIGNEGAKYIGQLSQLTSLYLSNNNIGNEGAKYIS 439
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
L L L ++ +I + G ++ + +T LD+ I + G Y+ K L LE
Sbjct: 440 ELKELIYLYMNNNKIRNEGAKYISEMKQVTQLDIGNNYIGEEGIKYISEMKQLIHLE 496
>gi|290980071|ref|XP_002672756.1| predicted protein [Naegleria gruberi]
gi|284086335|gb|EFC40012.1| predicted protein [Naegleria gruberi]
Length = 385
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 182/366 (49%), Gaps = 3/366 (0%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L S+D++ + + D G + +L SL+ + QI G + + G+ +L SLS
Sbjct: 15 SEMKHLTSLDIADNQIGDEGSKFISGMKHLTSLNIDRN-QIGVEGAKLISGMKSLISLSI 73
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
+N I +G K +G+ +L LD+ R G ++ + +L SLNI + N I
Sbjct: 74 G-DNQIGVEGAKLISGMKHLTSLDINRNQIGVEGAKSISRMKQLTSLNI-YYNQIGAEGA 131
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K +SG+ L SL I +++ Y+ +++LT L++ + S+S + L L
Sbjct: 132 KSISGMKQLTSLDIGGNQIGVEESKYISEMKQLTSLDIYNNQIGVEGAKSISGMKQLTSL 191
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
N+ ++ +G + S++ L LN+G NEI E + + +L SLN+ IGDEG
Sbjct: 192 NIGFNRIGVEGSKLISEMKQLTSLNIGSNEIGVEGSKFIPEMKHLTSLNIYYNEIGDEGS 251
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
++ + L L++ ++G G +++S + L S+ +S I + ++ + L SL
Sbjct: 252 KYISEMKQLTSLDIYYNEIGVEGAKYISEMKQLTSLGISDNQIGVEGAKFISEMKLLTSL 311
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL 413
++ QI D G ++ + LT L++ +I D GA + K L SL+I + + L
Sbjct: 312 DIADNQIGDEGSKFISEMKSLTSLNVNSNQIGDEGAKLISGMKQLTSLKIYYNQIGETLL 371
Query: 414 TGLVSL 419
++S+
Sbjct: 372 MSVISI 377
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 144/294 (48%), Gaps = 12/294 (4%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N I D K +SG+ +L SL I +++ G + G++ L L++ + +S
Sbjct: 28 NQIGDEGSKFISGMKHLTSLNIDRNQIGVEGAKLISGMKSLISLSIGDNQIGVEGAKLIS 87
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
+ L L++NR Q+ +G + S++ L LN+ +N+I E + G+ L SL++
Sbjct: 88 GMKHLTSLDINRNQIGVEGAKSISRMKQLTSLNIYYNQIGAEGAKSISGMKQLTSLDIGG 147
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
IG E ++ + L L++ + Q+G G + +SG+ L S+N+ F I + ++
Sbjct: 148 NQIGVEESKYISEMKQLTSLDIYNNQIGVEGAKSISGMKQLTSLNIGFNRIGVEGSKLIS 207
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
+ L SLN+ + +I G + + LT L+++ I D G+ Y+ K L SL+I
Sbjct: 208 EMKQLTSLNIGSNEIGVEGSKFIPEMKHLTSLNIYYNEIGDEGSKYISEMKQLTSLDIY- 266
Query: 406 GGLTDAGLTG---------LVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
+ G+ G L SL +S+++I G + + +K L SL + ++
Sbjct: 267 --YNEIGVEGAKYISEMKQLTSLGISDNQIGVEGAKFISEMKLLTSLDIADNQI 318
>gi|326513166|dbj|BAK06823.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 627
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 197/433 (45%), Gaps = 50/433 (11%)
Query: 25 LEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNL 83
LE FR ++Q++ L V+ +W+ + S L + L+ V S + L S L
Sbjct: 90 LEVFRH-SVQEIDLSGDIAVDAEWLAYLGS-FRYLGVLKLADCKKVDHSAIWPLSGMSML 147
Query: 84 QSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTR 143
+ LD + C +I+D G++H+ + +L L +T G+ + L L+ LDL
Sbjct: 148 KELDLSRCSKITDAGIKHIVSIDSLEKLHLS-ETGLTDNGVMLISALKGLILLDLGGIHM 206
Query: 144 IHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGL 203
L +L+ L +LE L++ W + ITD L T L+ L +S + VT L L
Sbjct: 207 TDKALRSLQVLTQLEHLDV-WGSEITDEGASILEAFTGLRFLNVSWTHVTR-----LPHL 260
Query: 204 QKLTLLNLEGCPVTAAC---------LDSLSALGSLF----------------YLNLNRC 238
+ LN+ C + + C L +A + F +L+++ C
Sbjct: 261 PNMKYLNMSNCTIYSICGGDSEVHIPLQKFTASAASFGDIDEVFSSIVASSFSFLDMSGC 320
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL-TNLESLNLDSCGIGDEGLVNLT 297
LS+ K+ SL+ L++ N +TD+ + ++ + L L+L + GI + L L
Sbjct: 321 SLSN--LYGLQKMKSLEHLDISLNRVTDDAVEYVANIGMKLRYLSLKNTGITSQALCILA 378
Query: 298 G-LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD-----------GSLRKLA 345
G + NL L L+ T++ S L ++S + +L I+LS T I SL L
Sbjct: 379 GTVPNLASLSLAYTKIDDSALVYISMMPSLRVIDLSHTTIKGFTRVEANSEKIPSLPLLE 438
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
L L+SLNL+ ++D + +TS L +L L ++D G L + NL L CG
Sbjct: 439 HLIYLESLNLEDAPLSDEVIPPMTSFRALKYLYLKSDFLSDPGLHALSSASNLIHLGFCG 498
Query: 406 GGLTDAGLTGLVS 418
L+++GL V
Sbjct: 499 SVLSNSGLLEFVP 511
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 180/440 (40%), Gaps = 96/440 (21%)
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
A+ A+ + L L L C ++ H + L G+ L+ L++ C+ ITD+ +K +
Sbjct: 107 AVDAEWLAYLGSFRYLGVLKLADCKKVDHSAIWPLSGMSMLKELDLSRCSKITDAGIKHI 166
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+ +L+ L +S + +TD+G+ + L+ L LL+L G +T L SL L L +L++
Sbjct: 167 VSIDSLEKLHLSETGLTDNGVMLISALKGLILLDLGGIHMTDKALRSLQVLTQLEHLDVW 226
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI-----GDE 291
+++D+G L+ LN+ + +T L L N++ LN+ +C I GD
Sbjct: 227 GSEITDEGASILEAFTGLRFLNVSWTHVT-----RLPHLPNMKYLNMSNCTIYSICGGDS 281
Query: 292 ---------------------------------------GLVNLTGLCNLKCLE------ 306
L NL GL +K LE
Sbjct: 282 EVHIPLQKFTASAASFGDIDEVFSSIVASSFSFLDMSGCSLSNLYGLQKMKSLEHLDISL 341
Query: 307 ----------------------LSDTQVGSSGLRHLSG-LTNLESINLSFTGISDGSLRK 343
L +T + S L L+G + NL S++L++T I D +L
Sbjct: 342 NRVTDDAVEYVANIGMKLRYLSLKNTGITSQALCILAGTVPNLASLSLAYTKIDDSALVY 401
Query: 344 LAGLSSLKSLNL-----------DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
++ + SL+ ++L +A L L L L L+L A ++D +
Sbjct: 402 ISMMPSLRVIDLSHTTIKGFTRVEANSEKIPSLPLLEHLIYLESLNLEDAPLSDEVIPPM 461
Query: 393 RNFKNLRSLEICGGGLTDAGL------TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
+F+ L+ L + L+D GL + L+ L S ++++GL P L L L
Sbjct: 462 TSFRALKYLYLKSDFLSDPGLHALSSASNLIHLGFCGSVLSNSGLLEFVPPAQLHVLDLS 521
Query: 447 SCKVTANDIKRLQSRDLPNL 466
C + D R P++
Sbjct: 522 GCWILTGDAISTFRRHHPSI 541
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 122/282 (43%), Gaps = 37/282 (13%)
Query: 15 VYSRC----LTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVT 70
+YS C + L+ F A + +++ + ++AS S L D+SG +
Sbjct: 273 IYSICGGDSEVHIPLQKFTASA------ASFGDIDEVFSSIVASSFSFL---DMSGCSL- 322
Query: 71 DSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLS-NLTSLSFRRNNAITAQGMKAFAG 129
S L L+ +L+ LD + +++D +E++ + L LS + N IT+Q + AG
Sbjct: 323 -SNLYGLQKMKSLEHLDISLN-RVTDDAVEYVANIGMKLRYLSLK-NTGITSQALCILAG 379
Query: 130 LI-NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
+ NL L L LV + + L + D + G T +++ +
Sbjct: 380 TVPNLASLSLAYTKIDDSALVYISMMPSLR---------VIDLSHTTIKGFTRVEA---N 427
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
K+ + L+ L L LNLE P++ + +++ +L YL L LSD G
Sbjct: 428 SEKIP--SLPLLEHLIYLESLNLEDAPLSDEVIPPMTSFRALKYLYLKSDFLSDPGLHAL 485
Query: 249 SKIGSLKVLNLGF--NEITDECLVHLKGLTNLESLNLDSCGI 288
S +L ++LGF + +++ L+ L L+L C I
Sbjct: 486 SSASNL--IHLGFCGSVLSNSGLLEFVPPAQLHVLDLSGCWI 525
>gi|283778672|ref|YP_003369427.1| hypothetical protein Psta_0882 [Pirellula staleyi DSM 6068]
gi|283437125|gb|ADB15567.1| hypothetical protein Psta_0882 [Pirellula staleyi DSM 6068]
Length = 450
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 120/238 (50%), Gaps = 4/238 (1%)
Query: 161 NIKWCNC----ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV 216
NI+W + +TD+ + L+ + +K L + +K++ G+A L L L L+L+ P+
Sbjct: 204 NIQWLSLEGSDVTDAVLPKLAKIPEIKRLFLGSTKLSGGGLATLAPLVDLEYLSLKQLPI 263
Query: 217 TAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT 276
L L L L L+ +++D G K K L L L +TDE ++ + ++
Sbjct: 264 DDRDLQELPEFPKLMSLGLDFTEVTDAGLTKLPKFAMLDTLWLDATRVTDEGMLEVAKIS 323
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
L SL + + + G +L L +L+ L L Q+ L+HL GL N+E + L T +
Sbjct: 324 TLRSLFMPATQVKGPGFSHLMKLASLRYLSLKGVQLDDVALQHLVGLENIEILGLDHTNV 383
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
+D + +L G++ LK+L L +TD + +L+ + L + L G+ ++ GA LR
Sbjct: 384 TDKQIEQLVGMTRLKTLWLSKTAVTDGAIESLSKIRSLQTVYLHGSEVSADGAERLRR 441
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 116/234 (49%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
L N++ L + S VTD+ + L + ++ L L ++ L +L+ L L YL+L +
Sbjct: 202 LGNIQWLSLEGSDVTDAVLPKLAKIPEIKRLFLGSTKLSGGGLATLAPLVDLEYLSLKQL 261
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
+ D ++ + L L L F E+TD L L L++L LD+ + DEG++ +
Sbjct: 262 PIDDRDLQELPEFPKLMSLGLDFTEVTDAGLTKLPKFAMLDTLWLDATRVTDEGMLEVAK 321
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
+ L+ L + TQV G HL L +L ++L + D +L+ L GL +++ L LD
Sbjct: 322 ISTLRSLFMPATQVKGPGFSHLMKLASLRYLSLKGVQLDDVALQHLVGLENIEILGLDHT 381
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
+TD + L +T L L L +TD L ++L+++ + G ++ G
Sbjct: 382 NVTDKQIEQLVGMTRLKTLWLSKTAVTDGAIESLSKIRSLQTVYLHGSEVSADG 435
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 129/250 (51%), Gaps = 7/250 (2%)
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
+D + LG++ +L+L ++D K +KI +K L LG +++ L L L +LE
Sbjct: 196 VDHVVQLGNIQWLSLEGSDVTDAVLPKLAKIPEIKRLFLGSTKLSGGGLATLAPLVDLEY 255
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
L+L I D L L L L L T+V +GL L L+++ L T ++D
Sbjct: 256 LSLKQLPIDDRDLQELPEFPKLMSLGLDFTEVTDAGLTKLPKFAMLDTLWLDATRVTDEG 315
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRS 400
+ ++A +S+L+SL + A Q+ G + L L L +L L G ++ D +L +N+
Sbjct: 316 MLEVAKISTLRSLFMPATQVKGPGFSHLMKLASLRYLSLKGVQLDDVALQHLVGLENIEI 375
Query: 401 LEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAND 454
L + +TD G+T L +L +S + +T + L +++L+++ L +V+A+
Sbjct: 376 LGLDHTNVTDKQIEQLVGMTRLKTLWLSKTAVTDGAIESLSKIRSLQTVYLHGSEVSADG 435
Query: 455 IKRLQSRDLP 464
+RL+ R+LP
Sbjct: 436 AERLR-RELP 444
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 87/200 (43%), Gaps = 30/200 (15%)
Query: 289 GDEGLVNLTGLCNLKCLELS------------------------DTQVGSSGLRHLSGLT 324
GDEG+ ++ L N++ L L T++ GL L+ L
Sbjct: 192 GDEGVDHVVQLGNIQWLSLEGSDVTDAVLPKLAKIPEIKRLFLGSTKLSGGGLATLAPLV 251
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI 384
+LE ++L I D L++L L SL LD ++TD GL L L L L R+
Sbjct: 252 DLEYLSLKQLPIDDRDLQELPEFPKLMSLGLDFTEVTDAGLTKLPKFAMLDTLWLDATRV 311
Query: 385 TDSGAAYLRNFKNLRSL-----EICGGGLTD-AGLTGLVSLNVSNSRITSAGLRHLKPLK 438
TD G + LRSL ++ G G + L L L++ ++ L+HL L+
Sbjct: 312 TDEGMLEVAKISTLRSLFMPATQVKGPGFSHLMKLASLRYLSLKGVQLDDVALQHLVGLE 371
Query: 439 NLRSLTLESCKVTANDIKRL 458
N+ L L+ VT I++L
Sbjct: 372 NIEILGLDHTNVTDKQIEQL 391
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 5/183 (2%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+ D L L + L SL +F +++D GL L + L +L +T +GM A
Sbjct: 263 IDDRDLQELPEFPKLMSLGLDFT-EVTDAGLTKLPKFAMLDTLWLDATR-VTDEGMLEVA 320
Query: 129 GLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
+ L L + T++ G G +L L L L++K + D ++ L GL N++ L +
Sbjct: 321 KISTLRSLFMP-ATQVKGPGFSHLMKLASLRYLSLKGVQ-LDDVALQHLVGLENIEILGL 378
Query: 188 SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEK 247
+ VTD I L G+ +L L L VT ++SLS + SL + L+ ++S DG E+
Sbjct: 379 DHTNVTDKQIEQLVGMTRLKTLWLSKTAVTDGAIESLSKIRSLQTVYLHGSEVSADGAER 438
Query: 248 FSK 250
+
Sbjct: 439 LRR 441
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 5/186 (2%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI 92
L+ L L Q P ++D+ + + + L+S+ L ++VTD+GL L + L +L +
Sbjct: 253 LEYLSLKQLP-IDDRDLQEL-PEFPKLMSLGLDFTEVTDAGLTKLPKFAMLDTLWLD-AT 309
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
+++D G+ + +S L SL F + G L +L L L+ L +L
Sbjct: 310 RVTDEGMLEVAKISTLRSL-FMPATQVKGPGFSHLMKLASLRYLSLKGVQLDDVALQHLV 368
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
GL +E L + N +TD ++ L G+T LK+L +S + VTD I L ++ L + L
Sbjct: 369 GLENIEILGLDHTN-VTDKQIEQLVGMTRLKTLWLSKTAVTDGAIESLSKIRSLQTVYLH 427
Query: 213 GCPVTA 218
G V+A
Sbjct: 428 GSEVSA 433
>gi|430746590|ref|YP_007205719.1| hypothetical protein Sinac_5908 [Singulisphaera acidiphila DSM
18658]
gi|430018310|gb|AGA30024.1| hypothetical protein Sinac_5908 [Singulisphaera acidiphila DSM
18658]
Length = 506
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 200/428 (46%), Gaps = 63/428 (14%)
Query: 47 KWM-DVIASQ-GSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQ------ISDGG 98
KWM D ++++V L G +V D L++ L +++ F IQ ++ G
Sbjct: 112 KWMRDAFGPDLFDTVVNVHLEGDNVDDE---LLENVGKLHGVEW-FTIQGHAAPNLTPAG 167
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
+ LR LS L LS R F T HG L L G +L
Sbjct: 168 MAQLRTLSRLKGLSVR-----------GF--------------TDSHGFLAGLMGKTRLS 202
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
L + +TD +M + GLT+L+ LQ+ VTD G A++ L++L+LL++ G +T
Sbjct: 203 HLRLPEA-AVTDDEMAIIGGLTDLEVLQLDGRNVTDRGFAHVANLKELSLLDMPGVRIT- 260
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
L+ + L L++ LS D F++ V + G L L+GLTNL
Sbjct: 261 ----DLAPVTDLVQLDV--LGLSPDRA-TFAR----SVPSPG----GPSSLGPLRGLTNL 305
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
L L + I D L GL L L + ++ +GL L+ +L + + T I+D
Sbjct: 306 TQLTLGATQIEDRELAVAAGLPKLSYLMIGGRRITEAGLARLAESKSLTGLRFTDTSIAD 365
Query: 339 GSLRKLAG-LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
LR L+ L +L L ++ +TD GL L+ T + L + G+R+TD+G +L +
Sbjct: 366 --LRPLSPRLHALWGLYMENSALTDAGLEPLSDATRIGDLTITGSRMTDAGLHHLAPLPS 423
Query: 398 LRSLEICGGGLTDAGLTGLVS------LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
L L + +TDAGL L S L+++ +++T + + L ++L+SL L+ ++
Sbjct: 424 LWKLRLGRSAITDAGLGRLKSLKSLETLSLTETKLTDSSVETLAGFQSLKSLNLDRSGIS 483
Query: 452 ANDIKRLQ 459
I+RL+
Sbjct: 484 PAGIERLK 491
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 130/293 (44%), Gaps = 27/293 (9%)
Query: 188 SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEK 247
+ +T +G+A L+ L +L L++ G + L L L +L L ++DD
Sbjct: 159 AAPNLTPAGMAQLRTLSRLKGLSVRGFTDSHGFLAGLMGKTRLSHLRLPEAAVTDDEMAI 218
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL 307
+ L+VL L +TD H+ L L L++ I D L +T L L L L
Sbjct: 219 IGGLTDLEVLQLDGRNVTDRGFAHVANLKELSLLDMPGVRITD--LAPVTDLVQLDVLGL 276
Query: 308 SDTQV----------GSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA 357
S + G S L L GLTNL + L T I D L AGL L L +
Sbjct: 277 SPDRATFARSVPSPGGPSSLGPLRGLTNLTQLTLGATQIEDRELAVAAGLPKLSYLMIGG 336
Query: 358 RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR----NFKNLRSLEICGGGLTDAGL 413
R+IT+ GLA L LT G R TD+ A LR L L + LTDAGL
Sbjct: 337 RRITEAGLARLAESKSLT-----GLRFTDTSIADLRPLSPRLHALWGLYMENSALTDAGL 391
Query: 414 ------TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
T + L ++ SR+T AGL HL PL +L L L +T + RL+S
Sbjct: 392 EPLSDATRIGDLTITGSRMTDAGLHHLAPLPSLWKLRLGRSAITDAGLGRLKS 444
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 122/307 (39%), Gaps = 81/307 (26%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISD------- 96
V D M +I + L + L G +VTD G H+ + L LD ++I+D
Sbjct: 211 VTDDEMAIIGGL-TDLEVLQLDGRNVTDRGFAHVANLKELSLLDMP-GVRITDLAPVTDL 268
Query: 97 ----------------------GG---LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLI 131
GG L LRGL+NLT L+ I + + AGL
Sbjct: 269 VQLDVLGLSPDRATFARSVPSPGGPSSLGPLRGLTNLTQLTLGATQ-IEDRELAVAAGLP 327
Query: 132 NLVKLDLERCTRIHGGLVNL---KGLMKLE--------------SLNIKWC-----NCIT 169
L L + GL L K L L L+ W + +T
Sbjct: 328 KLSYLMIGGRRITEAGLARLAESKSLTGLRFTDTSIADLRPLSPRLHALWGLYMENSALT 387
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
D+ ++PLS T + L I+ S++TD+G+ + L+ L S
Sbjct: 388 DAGLEPLSDATRIGDLTITGSRMTDAGLHH------------------------LAPLPS 423
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L+ L L R ++D G + + SL+ L+L ++TD + L G +L+SLNLD GI
Sbjct: 424 LWKLRLGRSAITDAGLGRLKSLKSLETLSLTETKLTDSSVETLAGFQSLKSLNLDRSGIS 483
Query: 290 DEGLVNL 296
G+ L
Sbjct: 484 PAGIERL 490
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 34/190 (17%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLS-NLTSLS--FRRNNAIT 120
+ G +T++GL L + +L L F +D + LR LS L +L + N+A+T
Sbjct: 334 IGGRRITEAGLARLAESKSLTGLRF------TDTSIADLRPLSPRLHALWGLYMENSALT 387
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
G++ L TRI G + + G + +TD+ + L+ L
Sbjct: 388 DAGLEP-----------LSDATRI--GDLTITG------------SRMTDAGLHHLAPLP 422
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
+L L++ S +TD+G+ LK L+ L L+L +T + +++L+ SL LNL+R +
Sbjct: 423 SLWKLRLGRSAITDAGLGRLKSLKSLETLSLTETKLTDSSVETLAGFQSLKSLNLDRSGI 482
Query: 241 SDDGCEKFSK 250
S G E+ +
Sbjct: 483 SPAGIERLKQ 492
>gi|290996081|ref|XP_002680611.1| predicted protein [Naegleria gruberi]
gi|284094232|gb|EFC47867.1| predicted protein [Naegleria gruberi]
Length = 412
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 146/294 (49%), Gaps = 12/294 (4%)
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
+ K ++ + L SL IS +++ D G Y+ +++LT L++ + +S + L
Sbjct: 118 EAKFITEMKQLTSLDISENQIGDEGAKYISEMRQLTSLDISDIEIGDEGAKYISEMKQLT 177
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
LN++ +SD+G + S++ L L++ N I DE +++ + L SLN+ I DE
Sbjct: 178 SLNISYNAISDEGAKFISEMKQLMSLHIYKNLIGDEGAKYIREMKQLTSLNISYNSISDE 237
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
G ++ + L L++ ++ G + +S + L S+++S I D ++ L+ + L
Sbjct: 238 GAKFISEMKQLTSLDIVFNEISGEGAKFISEMKQLTSLDISDNEIGDEGVKYLSEMKQLT 297
Query: 352 SLNLDARQIT------DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
SL + +IT + G ++ + LT LD+ I+D GA Y+ K L SL I
Sbjct: 298 SLTISGNEITYCNQISEEGAKFISEMKQLTSLDISYNLISDEGAKYISEMKQLTSLNISY 357
Query: 406 GGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAN 453
++ G + L SL++ ++RI G +++ +K L SL + + +N
Sbjct: 358 NSISGEGAKFISEMKQLTSLDIVSNRIGDEGAKYISEMKQLTSLNISDNQFNSN 411
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 147/280 (52%), Gaps = 9/280 (3%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L S+D+S + + D G ++ + L SLD + I+I D G +++ + LTSL+ NA
Sbjct: 128 LTSLDISENQIGDEGAKYISEMRQLTSLDIS-DIEIGDEGAKYISEMKQLTSLNISY-NA 185
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
I+ +G K + + L+ L + + G ++ + +L SLNI + N I+D K +S
Sbjct: 186 ISDEGAKFISEMKQLMSLHIYKNLIGDEGAKYIREMKQLTSLNISY-NSISDEGAKFISE 244
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN-- 236
+ L SL I ++++ G ++ +++LT L++ + + LS + L L ++
Sbjct: 245 MKQLTSLDIVFNEISGEGAKFISEMKQLTSLDISDNEIGDEGVKYLSEMKQLTSLTISGN 304
Query: 237 ---RC-QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
C Q+S++G + S++ L L++ +N I+DE ++ + L SLN+ I EG
Sbjct: 305 EITYCNQISEEGAKFISEMKQLTSLDISYNLISDEGAKYISEMKQLTSLNISYNSISGEG 364
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
++ + L L++ ++G G +++S + L S+N+S
Sbjct: 365 AKFISEMKQLTSLDIVSNRIGDEGAKYISEMKQLTSLNIS 404
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 126/258 (48%), Gaps = 18/258 (6%)
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
++ + L L+++ Q+ D+G + S++ L L++ EI DE ++ + L SLN+
Sbjct: 122 ITEMKQLTSLDISENQIGDEGAKYISEMRQLTSLDISDIEIGDEGAKYISEMKQLTSLNI 181
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
I DEG ++ + L L + +G G +++ + L S+N+S+ ISD +
Sbjct: 182 SYNAISDEGAKFISEMKQLMSLHIYKNLIGDEGAKYIREMKQLTSLNISYNSISDEGAKF 241
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
++ + L SL++ +I+ G ++ + LT LD+ I D G YL K L SL I
Sbjct: 242 ISEMKQLTSLDIVFNEISGEGAKFISEMKQLTSLDISDNEIGDEGVKYLSEMKQLTSLTI 301
Query: 404 CGGGLTD------------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
G +T + + L SL++S + I+ G +++ +K L SL + ++
Sbjct: 302 SGNEITYCNQISEEGAKFISEMKQLTSLDISYNLISDEGAKYISEMKQLTSLNISYNSIS 361
Query: 452 A------NDIKRLQSRDL 463
+++K+L S D+
Sbjct: 362 GEGAKFISEMKQLTSLDI 379
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 35/182 (19%)
Query: 35 DLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSL-----DFN 89
D+ + G K++ S+ L S+D+S +++ D G+ +L + L SL +
Sbjct: 252 DIVFNEISGEGAKFI----SEMKQLTSLDISDNEIGDEGVKYLSEMKQLTSLTISGNEIT 307
Query: 90 FCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLV 149
+C QIS+ G + + + LTSL N I+ +G K
Sbjct: 308 YCNQISEEGAKFISEMKQLTSLDISY-NLISDEGAKY----------------------- 343
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
+ + +L SLNI + N I+ K +S + L SL I +++ D G Y+ +++LT L
Sbjct: 344 -ISEMKQLTSLNISY-NSISGEGAKFISEMKQLTSLDIVSNRIGDEGAKYISEMKQLTSL 401
Query: 210 NL 211
N+
Sbjct: 402 NI 403
>gi|207743293|ref|YP_002259685.1| type III effector gala6 protein [Ralstonia solanacearum IPO1609]
gi|206594690|emb|CAQ61617.1| type III effector gala6 protein [Ralstonia solanacearum IPO1609]
Length = 625
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 131/432 (30%), Positives = 199/432 (46%), Gaps = 16/432 (3%)
Query: 11 FNELVYSRCLTEVSLEAFR--DCALQDLCLGQY--PGVNDKWMDVIASQGSSLLSVDLSG 66
+ L R E++LEA + ++ L +G+ GV++ + ++A++ L S+ L+G
Sbjct: 139 YPALKSVRFKGELTLEALKALPPGVEHLEIGRSTGSGVSNAGLALLATR--PLKSLSLNG 196
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
++ G L C++L SL C I D L ++ SL N I G +A
Sbjct: 197 IEIDAEGARLLATCASLTSLSLTGC-SIGDRAATALAQSRSIASLDLSVN-MIGPDGARA 254
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
AG LV L+L G + L L+SLN N I D+ + + T L L
Sbjct: 255 LAG-APLVSLNLHNNGIGDEGALALATSGTLKSLNAS-NNGIGDAGVLGFADNTVLTQLN 312
Query: 187 ISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCE 246
++ + + +G L+ LT L+L + A L+ SL LN+ ++ DDG E
Sbjct: 313 LAGNMIGPAGARALRRNTSLTELDLSTNRLGDAGAQVLAGSRSLTSLNVRNNEIGDDGTE 372
Query: 247 KFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE 306
++ +LK LNL +N I + L G T L L+L +C I G L ++ L
Sbjct: 373 ALARNTTLKSLNLSYNRIGLQGAGALGGNTTLSELDLRACAIDPYGASALARNTSVASLH 432
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA 366
L ++G SG R ++ + L ++LS I D + LAG SL SLNLD +I D G A
Sbjct: 433 LGSNRIGDSGARAIATIRTLTLLDLSRNNIHDAGAQVLAGNDSLMSLNLDDNEIGDDGTA 492
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL------TGLVSLN 420
AL LT L+L RI +GA +L L L++ + G T L +LN
Sbjct: 493 ALAQHPRLTSLNLASNRIGPTGAQHLAKSATLTELDLSENRIGPEGAEALSLSTVLTTLN 552
Query: 421 VSNSRITSAGLR 432
VS + I AG R
Sbjct: 553 VSGNAIGEAGAR 564
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 156/338 (46%), Gaps = 4/338 (1%)
Query: 56 GSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
G+ L+S++L + + D G + L L+SL+ + I D G+ + LT L+
Sbjct: 257 GAPLVSLNLHNNGIGDEGALALATSGTLKSLNASNN-GIGDAGVLGFADNTVLTQLNLA- 314
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
N I G +A +L +LDL G L G L SLN++ N I D +
Sbjct: 315 GNMIGPAGARALRRNTSLTELDLSTNRLGDAGAQVLAGSRSLTSLNVR-NNEIGDDGTEA 373
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L+ T LKSL +S +++ G L G L+ L+L C + +L+ S+ L+L
Sbjct: 374 LARNTTLKSLNLSYNRIGLQGAGALGGNTTLSELDLRACAIDPYGASALARNTSVASLHL 433
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
++ D G + I +L +L+L N I D L G +L SLNLD IGD+G
Sbjct: 434 GSNRIGDSGARAIATIRTLTLLDLSRNNIHDAGAQVLAGNDSLMSLNLDDNEIGDDGTAA 493
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L L L L+ ++G +G +HL+ L ++LS I L+ + L +LN+
Sbjct: 494 LAQHPRLTSLNLASNRIGPTGAQHLAKSATLTELDLSENRIGPEGAEALSLSTVLTTLNV 553
Query: 356 DARQITDTGLAALTSL-TGLTHLDLFGARITDSGAAYL 392
I + G A T LT LD R+ ++GA L
Sbjct: 554 SGNAIGEAGARAFAEKSTSLTSLDARNNRMGEAGAKML 591
>gi|83748568|ref|ZP_00945588.1| Leucine-rich repeat family protein [Ralstonia solanacearum UW551]
gi|83724776|gb|EAP71934.1| Leucine-rich repeat family protein [Ralstonia solanacearum UW551]
Length = 629
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 131/432 (30%), Positives = 199/432 (46%), Gaps = 16/432 (3%)
Query: 11 FNELVYSRCLTEVSLEAFR--DCALQDLCLGQY--PGVNDKWMDVIASQGSSLLSVDLSG 66
+ L R E++LEA + ++ L +G+ GV++ + ++A++ L S+ L+G
Sbjct: 143 YPALKSVRFKGELTLEALKALPPGVEHLEIGRSTGSGVSNAGLALLATR--PLKSLSLNG 200
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
++ G L C++L SL C I D L ++ SL N I G +A
Sbjct: 201 IEIDAEGARLLATCASLTSLSLTGC-SIGDRAATALAQSRSIASLDLSVN-MIGPDGARA 258
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
AG LV L+L G + L L+SLN N I D+ + + T L L
Sbjct: 259 LAG-APLVSLNLHNNGIGDEGALALATSGTLKSLNAS-NNGIGDAGVLGFADNTVLTQLN 316
Query: 187 ISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCE 246
++ + + +G L+ LT L+L + A L+ SL LN+ ++ DDG E
Sbjct: 317 LAGNMIGPAGARALRRNTSLTELDLSTNRLGDAGAQVLAGSRSLTSLNVRNNEIGDDGTE 376
Query: 247 KFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE 306
++ +LK LNL +N I + L G T L L+L +C I G L ++ L
Sbjct: 377 ALARNTTLKSLNLSYNRIGLQGAGALGGNTTLSELDLRACAIDPYGASALARNTSVASLH 436
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA 366
L ++G SG R ++ + L ++LS I D + LAG SL SLNLD +I D G A
Sbjct: 437 LGSNRIGDSGARAIATIRTLTLLDLSRNNIHDAGAQVLAGNDSLMSLNLDDNEIGDDGTA 496
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL------TGLVSLN 420
AL LT L+L RI +GA +L L L++ + G T L +LN
Sbjct: 497 ALAQHPRLTSLNLASNRIGPTGAQHLAKSATLTELDLSENRIGPEGAEALSLSTVLTTLN 556
Query: 421 VSNSRITSAGLR 432
VS + I AG R
Sbjct: 557 VSGNAIGEAGAR 568
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 156/338 (46%), Gaps = 4/338 (1%)
Query: 56 GSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
G+ L+S++L + + D G + L L+SL+ + I D G+ + LT L+
Sbjct: 261 GAPLVSLNLHNNGIGDEGALALATSGTLKSLNASNN-GIGDAGVLGFADNTVLTQLNLA- 318
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
N I G +A +L +LDL G L G L SLN++ N I D +
Sbjct: 319 GNMIGPAGARALRRNTSLTELDLSTNRLGDAGAQVLAGSRSLTSLNVR-NNEIGDDGTEA 377
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L+ T LKSL +S +++ G L G L+ L+L C + +L+ S+ L+L
Sbjct: 378 LARNTTLKSLNLSYNRIGLQGAGALGGNTTLSELDLRACAIDPYGASALARNTSVASLHL 437
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
++ D G + I +L +L+L N I D L G +L SLNLD IGD+G
Sbjct: 438 GSNRIGDSGARAIATIRTLTLLDLSRNNIHDAGAQVLAGNDSLMSLNLDDNEIGDDGTAA 497
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L L L L+ ++G +G +HL+ L ++LS I L+ + L +LN+
Sbjct: 498 LAQHPRLTSLNLASNRIGPTGAQHLAKSATLTELDLSENRIGPEGAEALSLSTVLTTLNV 557
Query: 356 DARQITDTGLAALTSL-TGLTHLDLFGARITDSGAAYL 392
I + G A T LT LD R+ ++GA L
Sbjct: 558 SGNAIGEAGARAFAEKSTSLTSLDARNNRMGEAGAKML 595
>gi|290993192|ref|XP_002679217.1| predicted protein [Naegleria gruberi]
gi|284092833|gb|EFC46473.1| predicted protein [Naegleria gruberi]
Length = 310
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 144/281 (51%), Gaps = 8/281 (2%)
Query: 174 KPLSGLTNLKSLQISCS-KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
K + L NLK L +S + + + + + L++L LN+ C + + L+ L L
Sbjct: 30 KCICQLKNLKKLDVSYNYHLENEVVELISELRELRELNIRYCDIGVEEVKYLTKLDKLHS 89
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L++ Q+ DG + S + SL L++ EI DE + L L LN++ GIG G
Sbjct: 90 LDIGINQIYADGAKLLSTMKSLTKLDVAECEIGDEGCQSITELYQLTDLNINGDGIGVGG 149
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
+ + NLK L++S+ G+ G + +S L+ LE +N+S++ I + + +L L +L S
Sbjct: 150 ANCIGQMRNLKSLDISNNFFGNYGAKSISELSQLEILNVSYSDIDEVGVYQLRKLKNLTS 209
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
L++ +ITD G + L LTHLD+ +I GA + L SL I + D G
Sbjct: 210 LSIHHNEITDEGTKYIVELDQLTHLDISNNQIETEGAKSISEMSQLTSLNISSNIIGDEG 269
Query: 413 ------LTGLVSLNVSNSRITSAGLRHL-KPLKNLRSLTLE 446
L L SLNVS R++ G+ + K LK+L++L +E
Sbjct: 270 AQYISHLKKLTSLNVSKCRVSEEGVESIRKQLKHLKTLEVE 310
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 143/290 (49%), Gaps = 27/290 (9%)
Query: 105 LSNLTSLSFR-RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL-KGLMKLESLNI 162
LSN ++ +N+ IT + K L NL KLD+ + +V L L +L LNI
Sbjct: 9 LSNFIFATYAGKNSEITVELAKCICQLKNLKKLDVSYNYHLENEVVELISELRELRELNI 68
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
++C+ I ++K L+ L L SL I +++ G L ++ LT L++ C +
Sbjct: 69 RYCD-IGVEEVKYLTKLDKLHSLDIGINQIYADGAKLLSTMKSLTKLDVAECEIGDEGCQ 127
Query: 223 SLSALGSLFYLNLN-------------------RCQLSDD-----GCEKFSKIGSLKVLN 258
S++ L L LN+N +S++ G + S++ L++LN
Sbjct: 128 SITELYQLTDLNINGDGIGVGGANCIGQMRNLKSLDISNNFFGNYGAKSISELSQLEILN 187
Query: 259 LGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
+ +++I + + L+ L NL SL++ I DEG + L L L++S+ Q+ + G +
Sbjct: 188 VSYSDIDEVGVYQLRKLKNLTSLSIHHNEITDEGTKYIVELDQLTHLDISNNQIETEGAK 247
Query: 319 HLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
+S ++ L S+N+S I D + ++ L L SLN+ ++++ G+ ++
Sbjct: 248 SISEMSQLTSLNISSNIIGDEGAQYISHLKKLTSLNVSKCRVSEEGVESI 297
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 13/210 (6%)
Query: 263 EITDE---CLVHLKGLTNLE-SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
EIT E C+ LK L L+ S N + +E + ++ L L+ L + +G ++
Sbjct: 23 EITVELAKCICQLKNLKKLDVSYNYH---LENEVVELISELRELRELNIRYCDIGVEEVK 79
Query: 319 HLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 378
+L+ L L S+++ I + L+ + SL L++ +I D G ++T L LT L+
Sbjct: 80 YLTKLDKLHSLDIGINQIYADGAKLLSTMKSLTKLDVAECEIGDEGCQSITELYQLTDLN 139
Query: 379 LFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLR 432
+ G I GA + +NL+SL+I + G L+ L LNVS S I G+
Sbjct: 140 INGDGIGVGGANCIGQMRNLKSLDISNNFFGNYGAKSISELSQLEILNVSYSDIDEVGVY 199
Query: 433 HLKPLKNLRSLTLESCKVTANDIKRLQSRD 462
L+ LKNL SL++ ++T K + D
Sbjct: 200 QLRKLKNLTSLSIHHNEITDEGTKYIVELD 229
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 5/210 (2%)
Query: 43 GVNDKWMD--VIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLE 100
G+N + D + S SL +D++ ++ D G + + L L+ N I GG
Sbjct: 93 GINQIYADGAKLLSTMKSLTKLDVAECEIGDEGCQSITELYQLTDLNIN-GDGIGVGGAN 151
Query: 101 HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL 160
+ + NL SL NN G K+ + L L L++ G+ L+ L L SL
Sbjct: 152 CIGQMRNLKSLDIS-NNFFGNYGAKSISELSQLEILNVSYSDIDEVGVYQLRKLKNLTSL 210
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC 220
+I N ITD K + L L L IS +++ G + + +LT LN+ +
Sbjct: 211 SIHH-NEITDEGTKYIVELDQLTHLDISNNQIETEGAKSISEMSQLTSLNISSNIIGDEG 269
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
+S L L LN+++C++S++G E K
Sbjct: 270 AQYISHLKKLTSLNVSKCRVSEEGVESIRK 299
>gi|290980851|ref|XP_002673145.1| predicted protein [Naegleria gruberi]
gi|284086726|gb|EFC40401.1| predicted protein [Naegleria gruberi]
Length = 468
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 154/333 (46%), Gaps = 4/333 (1%)
Query: 72 SGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLI 131
G H+ + L +L N I G + LR L NLT L+ N+ I +G K + L
Sbjct: 127 EGAKHVSEMKQLTNLYVN-ANNIGTEGAKFLRELKNLTYLNISEND-IGVEGAKYISELK 184
Query: 132 NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK 191
L LD+ G + L +L +L+I+ N T+ K +S L L+ L IS S
Sbjct: 185 QLTDLDISYNNIGTEGAKYISDLKQLTTLDIESNNIGTEG-AKYISELNQLQVLNISYSS 243
Query: 192 VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI 251
+ D G Y+ +++LT L + + + +S + L L + + D+G + S +
Sbjct: 244 LGDKGAQYISEMKQLTHLYISDSLIRSEGAKYISEMKQLTNLFIENNDIDDEGAKHISTM 303
Query: 252 GSLKVLNLGFNE-ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
L L + N I+DE +L L NL L + IG+EG +L+ L NL + +S T
Sbjct: 304 KELTKLYMQGNRLISDEGAKYLSELKNLTVLFIGDNRIGNEGAKHLSELKNLTSIYVSYT 363
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
++G G ++LS L L + + + GI + ++ L L L + I + G ++
Sbjct: 364 EIGDEGAKYLSELNKLTILQIGYNGIGAEGAKHISNLKELTMLKIQYNNIGNEGAKYISE 423
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
L LT LD+ I GA YL K L LEI
Sbjct: 424 LKQLTDLDISYNNIGTEGADYLSQMKQLTHLEI 456
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 158/332 (47%), Gaps = 12/332 (3%)
Query: 53 ASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLE---HLRGLSNLT 109
S+ L ++ ++ +++ G L++ NL L+ I +D G+E ++ L LT
Sbjct: 132 VSEMKQLTNLYVNANNIGTEGAKFLRELKNLTYLN----ISENDIGVEGAKYISELKQLT 187
Query: 110 SLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCIT 169
L NN I +G K + L L LD+E G + L +L+ LNI + +
Sbjct: 188 DLDISYNN-IGTEGAKYISDLKQLTTLDIESNNIGTEGAKYISELNQLQVLNISYS-SLG 245
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
D + +S + L L IS S + G Y+ +++LT L +E + +S +
Sbjct: 246 DKGAQYISEMKQLTHLYISDSLIRSEGAKYISEMKQLTNLFIENNDIDDEGAKHISTMKE 305
Query: 230 L--FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
L Y+ NR +SD+G + S++ +L VL +G N I +E HL L NL S+ +
Sbjct: 306 LTKLYMQGNRL-ISDEGAKYLSELKNLTVLFIGDNRIGNEGAKHLSELKNLTSIYVSYTE 364
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
IGDEG L+ L L L++ +G+ G +H+S L L + + + I + + ++ L
Sbjct: 365 IGDEGAKYLSELNKLTILQIGYNGIGAEGAKHISNLKELTMLKIQYNNIGNEGAKYISEL 424
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
L L++ I G L+ + LTHL++
Sbjct: 425 KQLTDLDISYNNIGTEGADYLSQMKQLTHLEI 456
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 161/349 (46%), Gaps = 26/349 (7%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW 164
L+N+++L F R A K FA + ++ L+++ N++G + ++
Sbjct: 80 LANISTLEFER--RTDAFDFKVFALMKHVTSLEIDD---------NIEGTTNENGIGVEG 128
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
+ S+MK L+ +L ++ + + G +L+ L+ LT LN+ + +
Sbjct: 129 AKHV--SEMKQLT------NLYVNANNIGTEGAKFLRELKNLTYLNISENDIGVEGAKYI 180
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
S L L L+++ + +G + S + L L++ N I E ++ L L+ LN+
Sbjct: 181 SELKQLTDLDISYNNIGTEGAKYISDLKQLTTLDIESNNIGTEGAKYISELNQLQVLNIS 240
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
+GD+G ++ + L L +SD+ + S G +++S + L ++ + I D + +
Sbjct: 241 YSSLGDKGAQYISEMKQLTHLYISDSLIRSEGAKYISEMKQLTNLFIENNDIDDEGAKHI 300
Query: 345 AGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
+ + L L + R I+D G L+ L LT L + RI + GA +L KNL S+ +
Sbjct: 301 STMKELTKLYMQGNRLISDEGAKYLSELKNLTVLFIGDNRIGNEGAKHLSELKNLTSIYV 360
Query: 404 CGGGLTDAGLTGLVSLN------VSNSRITSAGLRHLKPLKNLRSLTLE 446
+ D G L LN + + I + G +H+ LK L L ++
Sbjct: 361 SYTEIGDEGAKYLSELNKLTILQIGYNGIGAEGAKHISNLKELTMLKIQ 409
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 140/299 (46%), Gaps = 20/299 (6%)
Query: 170 DSDMKPLSG--LTNLKSLQISCSKVTDSG----IAYLKGLQKLTLL-NLEGCP----VTA 218
++ MKP G L N+ +L+ + TD+ A +K + L + N+EG +
Sbjct: 69 ENTMKPPQGQFLANISTLEFE--RRTDAFDFKVFALMKHVTSLEIDDNIEGTTNENGIGV 126
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
+S + L L +N + +G + ++ +L LN+ N+I E ++ L L
Sbjct: 127 EGAKHVSEMKQLTNLYVNANNIGTEGAKFLRELKNLTYLNISENDIGVEGAKYISELKQL 186
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
L++ IG EG ++ L L L++ +G+ G +++S L L+ +N+S++ + D
Sbjct: 187 TDLDISYNNIGTEGAKYISDLKQLTTLDIESNNIGTEGAKYISELNQLQVLNISYSSLGD 246
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 398
+ ++ + L L + I G ++ + LT+L + I D GA ++ K L
Sbjct: 247 KGAQYISEMKQLTHLYISDSLIRSEGAKYISEMKQLTNLFIENNDIDDEGAKHISTMKEL 306
Query: 399 RSLEICGGGL-TDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
L + G L +D G L L L + ++RI + G +HL LKNL S+ + ++
Sbjct: 307 TKLYMQGNRLISDEGAKYLSELKNLTVLFIGDNRIGNEGAKHLSELKNLTSIYVSYTEI 365
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 9/233 (3%)
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNL 302
+G + S++ L L + N I E L+ L NL LN+ IG EG ++ L L
Sbjct: 127 EGAKHVSEMKQLTNLYVNANNIGTEGAKFLRELKNLTYLNISENDIGVEGAKYISELKQL 186
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
L++S +G+ G +++S L L ++++ I + ++ L+ L+ LN+ + D
Sbjct: 187 TDLDISYNNIGTEGAKYISDLKQLTTLDIESNNIGTEGAKYISELNQLQVLNISYSSLGD 246
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGL 416
G ++ + LTHL + + I GA Y+ K L +L I + D G + L
Sbjct: 247 KGAQYISEMKQLTHLYISDSLIRSEGAKYISEMKQLTNLFIENNDIDDEGAKHISTMKEL 306
Query: 417 VSLNVSNSR-ITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVS 468
L + +R I+ G ++L LKNL L + ++ K L +L NL S
Sbjct: 307 TKLYMQGNRLISDEGAKYLSELKNLTVLFIGDNRIGNEGAKHL--SELKNLTS 357
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 119/252 (47%), Gaps = 17/252 (6%)
Query: 52 IASQGSSLLS-------VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRG 104
I ++G+ +S +++S S + D G ++ + L L + + I G +++
Sbjct: 220 IGTEGAKYISELNQLQVLNISYSSLGDKGAQYISEMKQLTHLYISDSL-IRSEGAKYISE 278
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNI 162
+ LT+L F NN I +G K + + L KL ++ R G K L +L++L +
Sbjct: 279 MKQLTNL-FIENNDIDDEGAKHISTMKELTKLYMQGNRLISDEGA----KYLSELKNLTV 333
Query: 163 KWC--NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC 220
+ N I + K LS L NL S+ +S +++ D G YL L KLT+L + + A
Sbjct: 334 LFIGDNRIGNEGAKHLSELKNLTSIYVSYTEIGDEGAKYLSELNKLTILQIGYNGIGAEG 393
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
+S L L L + + ++G + S++ L L++ +N I E +L + L
Sbjct: 394 AKHISNLKELTMLKIQYNNIGNEGAKYISELKQLTDLDISYNNIGTEGADYLSQMKQLTH 453
Query: 281 LNLDSCGIGDEG 292
L +++ +EG
Sbjct: 454 LEIETNSDAEEG 465
>gi|225426352|ref|XP_002266070.1| PREDICTED: uncharacterized protein LOC100261612 [Vitis vinifera]
Length = 598
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 187/434 (43%), Gaps = 95/434 (21%)
Query: 111 LSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCIT 169
+ R +++ A+ M G L L++ C RI + L + G+ L+ L++ C +
Sbjct: 73 IDLRGESSVDAEWMAYIGGFCCLCSLNIADCQRITNSALWPIIGMPNLKELDLSRCIKFS 132
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
DS ++ L + L+ L IS + VT GI + L L++L+L G PVT L SL L
Sbjct: 133 DSGLRHLISIRTLQKLCISETGVTADGINLVSSLTNLSVLDLGGLPVTDLVLSSLQVLTK 192
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI- 288
L YL+L ++S+ G L LN+ + ++T L L ++ LN+ +C I
Sbjct: 193 LQYLDLWGSKISNKGAADLVVFPKLSFLNIAWTDVTT-----LPDLPSIACLNMSNCTIH 247
Query: 289 ------GDEGLV---------------------------------NLTGLCNLKC----- 304
G + L+ +L C L C
Sbjct: 248 SMFEGEGAKALLEKITVSGATFLNVSEAFLFIETSFLSFLDVSRSSLNSFCFLSCMKALE 307
Query: 305 -LELSDTQVG-------------------------SSGLRHLSG-LTNLESINLSFTGIS 337
L+LS T +G S+G+ L+G + NLE+I+LS T +
Sbjct: 308 HLDLSFTMMGDDSIQLIACIGANLRNLNLSNTRVSSAGVSILAGCVPNLETISLSHTPVD 367
Query: 338 DGSLRKLAGLSSLKSLNL-----------DARQITDTGLAALTSLTGLTHLDLFGARITD 386
D ++ ++ +SS+K +NL D+ + + LAAL SL + LDL G ++ D
Sbjct: 368 DVAISYISMMSSVKIINLSNTNVKGLIWSDSELVWELSLAALHSLNYVKRLDLEGTQVED 427
Query: 387 SGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNL 440
L F+ L L + G LTD + L L++L++ ++ +T+ GL KP L
Sbjct: 428 EALCPLLRFQQLNELSLKGTRLTDLSLYQLSSLPNLINLSIGDTVLTNGGLNSFKPPATL 487
Query: 441 RSLTLESCKVTAND 454
+ L L C + D
Sbjct: 488 KLLDLRGCWLLTED 501
>gi|297742329|emb|CBI34478.3| unnamed protein product [Vitis vinifera]
Length = 588
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 187/434 (43%), Gaps = 95/434 (21%)
Query: 111 LSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCIT 169
+ R +++ A+ M G L L++ C RI + L + G+ L+ L++ C +
Sbjct: 73 IDLRGESSVDAEWMAYIGGFCCLCSLNIADCQRITNSALWPIIGMPNLKELDLSRCIKFS 132
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
DS ++ L + L+ L IS + VT GI + L L++L+L G PVT L SL L
Sbjct: 133 DSGLRHLISIRTLQKLCISETGVTADGINLVSSLTNLSVLDLGGLPVTDLVLSSLQVLTK 192
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI- 288
L YL+L ++S+ G L LN+ + ++T L L ++ LN+ +C I
Sbjct: 193 LQYLDLWGSKISNKGAADLVVFPKLSFLNIAWTDVTT-----LPDLPSIACLNMSNCTIH 247
Query: 289 ------GDEGLV---------------------------------NLTGLCNLKC----- 304
G + L+ +L C L C
Sbjct: 248 SMFEGEGAKALLEKITVSGATFLNVSEAFLFIETSFLSFLDVSRSSLNSFCFLSCMKALE 307
Query: 305 -LELSDTQVG-------------------------SSGLRHLSG-LTNLESINLSFTGIS 337
L+LS T +G S+G+ L+G + NLE+I+LS T +
Sbjct: 308 HLDLSFTMMGDDSIQLIACIGANLRNLNLSNTRVSSAGVSILAGCVPNLETISLSHTPVD 367
Query: 338 DGSLRKLAGLSSLKSLNL-----------DARQITDTGLAALTSLTGLTHLDLFGARITD 386
D ++ ++ +SS+K +NL D+ + + LAAL SL + LDL G ++ D
Sbjct: 368 DVAISYISMMSSVKIINLSNTNVKGLIWSDSELVWELSLAALHSLNYVKRLDLEGTQVED 427
Query: 387 SGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNL 440
L F+ L L + G LTD + L L++L++ ++ +T+ GL KP L
Sbjct: 428 EALCPLLRFQQLNELSLKGTRLTDLSLYQLSSLPNLINLSIGDTVLTNGGLNSFKPPATL 487
Query: 441 RSLTLESCKVTAND 454
+ L L C + D
Sbjct: 488 KLLDLRGCWLLTED 501
>gi|348503268|ref|XP_003439187.1| PREDICTED: hypothetical protein LOC100705990 [Oreochromis
niloticus]
Length = 894
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 200/410 (48%), Gaps = 23/410 (5%)
Query: 5 DISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDL 64
++++ + N + + R L +LE F C +Q L YP ++ + + + ++L + L
Sbjct: 474 ELAELLLNHMSHERLLHPRTLELFFGCPIQKFVLNSYPYSTNELLRQLRA-FTALKHLSL 532
Query: 65 SGSD-VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
S +TDSGL L LQ L+ C +++D L+H+ GL NL LS + +T G
Sbjct: 533 VNSPLITDSGLCILSTLVKLQYLNLASCSKLTDSCLQHITGLKNLCFLSLDQTK-VTDAG 591
Query: 124 MKAFAGLIN--LVKLDLERCTRIHGGLVNLK-GLMKLESLNIKWCNCITDSDMKPLSGLT 180
M + + L +L L + L L + +L L+IK D+ L+ ++
Sbjct: 592 MVLYLQSVPSCLSQLSLNQTAVTETTLAVLPTSVPQLRLLSIKQTKV---KDLTALAAMS 648
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
+L++L + + VT++ + +L LT L L G PV D AL + L L R L
Sbjct: 649 SLQTLNLDGTGVTEASLEHLATHPALTSLTLVGIPVA----DGSHALQIISGLKLTRITL 704
Query: 241 ------SDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+D G S++ L L+L + +ITD+ + HL LT L+ L+L + + D GL
Sbjct: 705 PGRHSVTDSGLSFLSRLTLLSELDLTDYTQITDQGVSHLSTLTRLKKLSLSNTQVTDAGL 764
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHL-SGLTNLESINLSFTGISDGSLRK-LAGLSSLK 351
+L + L+ L L T V S G+ L + L +L+ + L+ T + D +RK L S L
Sbjct: 765 PSLRCMQELQELCLDRTAVTSRGVADLITCLPHLQVLGLASTQVGDNVVRKGLIRCSQLV 824
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
LNL +ITD GL L + L ++L G ++ G A L + N+ S+
Sbjct: 825 KLNLSRTRITDHGLKYLKQMR-LAQVNLDGTGVSLMGIASLLSCTNINSI 873
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 167/345 (48%), Gaps = 50/345 (14%)
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
++AF L +L ++ T GL L L+KL+ LN+ C+ +TDS ++ ++GL NL
Sbjct: 521 LRAFTALKHLSLVNSPLIT--DSGLCILSTLVKLQYLNLASCSKLTDSCLQHITGLKNLC 578
Query: 184 SLQISCSKVTDSGIA-YLKGLQK-LTLLNLEGCPVTAACLDSL-SALGSLFYLNLNRCQL 240
L + +KVTD+G+ YL+ + L+ L+L VT L L +++ L L++ + ++
Sbjct: 579 FLSLDQTKVTDAGMVLYLQSVPSCLSQLSLNQTAVTETTLAVLPTSVPQLRLLSIKQTKV 638
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD---------- 290
D + + SL+ LNL +T+ L HL L SL L + D
Sbjct: 639 KD--LTALAAMSSLQTLNLDGTGVTEASLEHLATHPALTSLTLVGIPVADGSHALQIISG 696
Query: 291 ----------------EGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSF 333
GL L+ L L L+L+D TQ+ G+ HLS LT L+ ++LS
Sbjct: 697 LKLTRITLPGRHSVTDSGLSFLSRLTLLSELDLTDYTQITDQGVSHLSTLTRLKKLSLSN 756
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
T ++D L L + L+ L LD +T G+A L +T L HL + G T G +R
Sbjct: 757 TQVTDAGLPSLRCMQELQELCLDRTAVTSRGVADL--ITCLPHLQVLGLASTQVGDNVVR 814
Query: 394 NFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLK 438
+ L C + LV LN+S +RIT GL++LK ++
Sbjct: 815 -----KGLIRC---------SQLVKLNLSRTRITDHGLKYLKQMR 845
>gi|46445968|ref|YP_007333.1| hypothetical protein pc0334 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399609|emb|CAF23058.1| hypothetical protein pc0334 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 616
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 149/299 (49%), Gaps = 38/299 (12%)
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
L + E + + N I + + LT++ L + ++TD+ +A+L L L LNL G
Sbjct: 293 LTEFEKIINYFANAIEGLNFSEYAYLTDIHLLALKSWELTDARLAHLAPLVNLRHLNLSG 352
Query: 214 --CPVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLG-FNEITDECL 269
+T A L L+ L +L +LNL+ C +L+DDG + +L+ LNL N++TD L
Sbjct: 353 DMSNLTDAGLAHLTPLVNLQHLNLHWCDKLTDDGLAHLRSLVNLQHLNLHCCNKLTDAGL 412
Query: 270 VHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
HL+ L NL+ LNL C + D GL +LT L NL+ L+LS
Sbjct: 413 AHLRPLVNLQHLNLSKCPKLTDAGLAHLTPLVNLQHLDLS-------------------W 453
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGA-RITD 386
L+FTG L LA L L+ LNL ++TD GL LT L L HLDL G +TD
Sbjct: 454 CPLNFTG---AGLAYLAPLIDLQYLNLCCCNELTDIGLMHLTPLVNLQHLDLSGCDNLTD 510
Query: 387 SGAAYLRNFKNLRSLEI-CGGGLTDAGLTGLVS--------LNVSNSRITSAGLRHLKP 436
+G +L + NL+ L + C LT GL L S L+ + + AGL HL P
Sbjct: 511 AGLMHLTSLVNLQHLNLRCCDNLTKTGLMHLTSLVNLRQLVLSWYSPDLNEAGLAHLIP 569
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 149/295 (50%), Gaps = 48/295 (16%)
Query: 11 FNELVYSRCLTEVSLEAFRDCALQDLCLGQY-PGVNDKWMDVIASQGSSLLSVDLSG--S 67
F+E Y LT++ L A + L D L P VN L ++LSG S
Sbjct: 312 FSEYAY---LTDIHLLALKSWELTDARLAHLAPLVN-------------LRHLNLSGDMS 355
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
++TD+GL HL NLQ L+ ++C +++D GL HLR L NL L+ N +T G+
Sbjct: 356 NLTDAGLAHLTPLVNLQHLNLHWCDKLTDDGLAHLRSLVNLQHLNLHCCNKLTDAGLAHL 415
Query: 128 AGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNC-ITDSDMKPLSGLTNLKSL 185
L+NL L+L +C ++ GL +L L+ L+ L++ WC T + + L+ L +L+ L
Sbjct: 416 RPLVNLQHLNLSKCPKLTDAGLAHLTPLVNLQHLDLSWCPLNFTGAGLAYLAPLIDLQYL 475
Query: 186 QI-SCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQLSDD 243
+ C+++TD G+ +L L L L+L GC +T A L L++L +L +LNL RC
Sbjct: 476 NLCCCNELTDIGLMHLTPLVNLQHLDLSGCDNLTDAGLMHLTSLVNLQHLNL-RC----- 529
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD--SCGIGDEGLVNL 296
C+ +K G L+HL L NL L L S + + GL +L
Sbjct: 530 -CDNLTKTG----------------LMHLTSLVNLRQLVLSWYSPDLNEAGLAHL 567
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 37/264 (14%)
Query: 195 SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL--NRCQLSDDGCEKFSKIG 252
S AYL + LL L+ +T A L L+ L +L +LNL + L+D G + +
Sbjct: 313 SEYAYLTDIH---LLALKSWELTDARLAHLAPLVNLRHLNLSGDMSNLTDAGLAHLTPLV 369
Query: 253 SLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSD- 309
+L+ LNL + +++TD+ L HL+ L NL+ LNL C + D GL +L L NL+ L LS
Sbjct: 370 NLQHLNLHWCDKLTDDGLAHLRSLVNLQHLNLHCCNKLTDAGLAHLRPLVNLQHLNLSKC 429
Query: 310 TQVGSSGLRHLSGLTNLESINLS-----FTGISDGSLRKLAGLSSLKSLNLDA-RQITDT 363
++ +GL HL+ L NL+ ++LS FTG L LA L L+ LNL ++TD
Sbjct: 430 PKLTDAGLAHLTPLVNLQHLDLSWCPLNFTG---AGLAYLAPLIDLQYLNLCCCNELTDI 486
Query: 364 GLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEI-CGGGLTDAGLTGLVSLNV 421
GL LT L L HLDL G +TD+G +L + NL+ L + C LT GL
Sbjct: 487 GLMHLTPLVNLQHLDLSGCDNLTDAGLMHLTSLVNLQHLNLRCCDNLTKTGLM------- 539
Query: 422 SNSRITSAGLRHLKPLKNLRSLTL 445
HL L NLR L L
Sbjct: 540 -----------HLTSLVNLRQLVL 552
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 112/217 (51%), Gaps = 15/217 (6%)
Query: 247 KFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL--DSCGIGDEGLVNLTGLCNLKC 304
+++ + + +L L E+TD L HL L NL LNL D + D GL +LT L NL+
Sbjct: 314 EYAYLTDIHLLALKSWELTDARLAHLAPLVNLRHLNLSGDMSNLTDAGLAHLTPLVNLQH 373
Query: 305 LELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQIT 361
L L ++ GL HL L NL+ +NL ++D L L L +L+ LNL ++T
Sbjct: 374 LNLHWCDKLTDDGLAHLRSLVNLQHLNLHCCNKLTDAGLAHLRPLVNLQHLNLSKCPKLT 433
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGA--AYLRNFKNLRSLEI-CGGGLTDAGLTGLVS 418
D GLA LT L L HLDL + +GA AYL +L+ L + C LTD GL L
Sbjct: 434 DAGLAHLTPLVNLQHLDLSWCPLNFTGAGLAYLAPLIDLQYLNLCCCNELTDIGLMHLTP 493
Query: 419 L-NVSN------SRITSAGLRHLKPLKNLRSLTLESC 448
L N+ + +T AGL HL L NL+ L L C
Sbjct: 494 LVNLQHLDLSGCDNLTDAGLMHLTSLVNLQHLNLRCC 530
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 312 VGSSGLRHLSGLTNLESINLSFTGISDG-SLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
V SS L S LT E I F +G + + A L+ + L L + ++TD LA L
Sbjct: 282 VVSSLLNQASHLTEFEKIINYFANAIEGLNFSEYAYLTDIHLLALKSWELTDARLAHLAP 341
Query: 371 LTGLTHLDLFG--ARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGLVSL-NVSN--- 423
L L HL+L G + +TD+G A+L NL+ L + LTD GL L SL N+ +
Sbjct: 342 LVNLRHLNLSGDMSNLTDAGLAHLTPLVNLQHLNLHWCDKLTDDGLAHLRSLVNLQHLNL 401
Query: 424 ---SRITSAGLRHLKPLKNLRSLTLESCK 449
+++T AGL HL+PL NL+ L L C
Sbjct: 402 HCCNKLTDAGLAHLRPLVNLQHLNLSKCP 430
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 17/111 (15%)
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
K +N A I + LT + L L +TD+ A+L NLR L + G
Sbjct: 298 KIINYFANAIEGLNFSEYAYLTDIHLLALKSWELTDARLAHLAPLVNLRHLNLSGDM--- 354
Query: 411 AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC-KVTANDIKRLQS 460
S +T AGL HL PL NL+ L L C K+T + + L+S
Sbjct: 355 -------------SNLTDAGLAHLTPLVNLQHLNLHWCDKLTDDGLAHLRS 392
>gi|290997674|ref|XP_002681406.1| predicted protein [Naegleria gruberi]
gi|284095030|gb|EFC48662.1| predicted protein [Naegleria gruberi]
Length = 426
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 200/426 (46%), Gaps = 17/426 (3%)
Query: 35 DLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQI 94
D+ Q V K++ S+ L S+D+ + + G + L SLD QI
Sbjct: 8 DIGENQIGAVGAKFI----SEMKQLTSLDIIYNRIGAVGAKLISKMKQLTSLDIGGN-QI 62
Query: 95 SDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG--GLVNLK 152
D G + + + LTSLS NN I A G + + + L LD+ C G G+ ++
Sbjct: 63 GDEGAKFISEMKQLTSLSIY-NNLIGAVGFEFISEMKQLTSLDI--CYNEIGDEGVKSIC 119
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
+ +L SL+I + N I D +K +S + L SL I+ +++ G + +++LT L++
Sbjct: 120 EMKQLTSLSI-YNNRIGDEGVKFISEMKQLTSLDINNNRIGVQGAKSICEMKQLTSLSIY 178
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
A +S + L L+++ ++ +G + S++ L LN+ +N I E + +
Sbjct: 179 NNQTGAVGAKFISEMKQLTSLDISVNEIGVEGAKFISEMKQLTSLNICYNRIGAEGVKLI 238
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
+ L SL++ IGDEG ++ + L L + + Q+G G + +S + L S+
Sbjct: 239 SEMKQLTSLDIGGNEIGDEGAKFISEMKQLTSLNICENQIGDEGAKSISEMKQLTSLGAY 298
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
I + ++ + L SLN+ QI D G ++ + L LD++ I D G +
Sbjct: 299 NNEIGVEGTKLISEMKQLTSLNISKNQIGDEGAKLISEMKQLASLDIYYNEIGDEGVKLI 358
Query: 393 RNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
K L+SL I + D G + L SL++ + I G++ + +K L SL++
Sbjct: 359 SEMKQLKSLNISKNQIGDEGAKLISEMKQLTSLDIHFNEIGDEGVKLISEMKQLTSLSIY 418
Query: 447 SCKVTA 452
+ K+ +
Sbjct: 419 NQKMKS 424
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 160/323 (49%), Gaps = 15/323 (4%)
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
+ +L SL+I + N I K +S + L SL I +++ D G ++ +++LT L++
Sbjct: 25 MKQLTSLDIIY-NRIGAVGAKLISKMKQLTSLDIGGNQIGDEGAKFISEMKQLTSLSIYN 83
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
+ A + +S + L L++ ++ D+G + ++ L L++ N I DE + +
Sbjct: 84 NLIGAVGFEFISEMKQLTSLDICYNEIGDEGVKSICEMKQLTSLSIYNNRIGDEGVKFIS 143
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
+ L SL++++ IG +G ++ + L L + + Q G+ G + +S + L S+++S
Sbjct: 144 EMKQLTSLDINNNRIGVQGAKSICEMKQLTSLSIYNNQTGAVGAKFISEMKQLTSLDISV 203
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
I + ++ + L SLN+ +I G+ ++ + LT LD+ G I D GA ++
Sbjct: 204 NEIGVEGAKFISEMKQLTSLNICYNRIGAEGVKLISEMKQLTSLDIGGNEIGDEGAKFIS 263
Query: 394 NFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL-- 445
K L SL IC + D G + L SL N+ I G + + +K L SL +
Sbjct: 264 EMKQLTSLNICENQIGDEGAKSISEMKQLTSLGAYNNEIGVEGTKLISEMKQLTSLNISK 323
Query: 446 -----ESCKVTANDIKRLQSRDL 463
E K+ + ++K+L S D+
Sbjct: 324 NQIGDEGAKLIS-EMKQLASLDI 345
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 128/273 (46%), Gaps = 6/273 (2%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+ LKSL I +++ G ++ +++LT L++ + A +S + L L++
Sbjct: 1 MKQLKSLDIGENQIGAVGAKFISEMKQLTSLDIIYNRIGAVGAKLISKMKQLTSLDIGGN 60
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
Q+ D+G + S++ L L++ N I + + L SL++ IGDEG+ ++
Sbjct: 61 QIGDEGAKFISEMKQLTSLSIYNNLIGAVGFEFISEMKQLTSLDICYNEIGDEGVKSICE 120
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
+ L L + + ++G G++ +S + L S++++ I + + + L SL++
Sbjct: 121 MKQLTSLSIYNNRIGDEGVKFISEMKQLTSLDINNNRIGVQGAKSICEMKQLTSLSIYNN 180
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------ 412
Q G ++ + LT LD+ I GA ++ K L SL IC + G
Sbjct: 181 QTGAVGAKFISEMKQLTSLDISVNEIGVEGAKFISEMKQLTSLNICYNRIGAEGVKLISE 240
Query: 413 LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
+ L SL++ + I G + + +K L SL +
Sbjct: 241 MKQLTSLDIGGNEIGDEGAKFISEMKQLTSLNI 273
>gi|46447589|ref|YP_008954.1| hypothetical protein pc1955 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401230|emb|CAF24679.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 454
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 141/262 (53%), Gaps = 19/262 (7%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
++E+LN + D+ + L NLK L + +C +TD G+A+L L L LNL C
Sbjct: 196 EIEALNFSGNAHLADAHLLALKNCENLKLLHLEACQAITDDGLAHLALLTSLQHLNLYFC 255
Query: 215 P-VTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNE-ITDECLVH 271
+T A L L+ L +L +LNL+ C +++D G + + L+ LNL E +TD L H
Sbjct: 256 VNLTDAGLAHLTPLTALQHLNLSYCWKITDAGLAHLTPLTDLQHLNLSDCENLTDAGLAH 315
Query: 272 LKGLTNLESLNLDSC----GIGDEGLVNLTGL--CNLK-CLELSDTQVGSSGLRHLSGLT 324
L LT L LNL C +G L LTGL NLK C L+D +G HL+ LT
Sbjct: 316 LTPLTALLYLNLSKCYHLTNVGLAHLAPLTGLQYLNLKWCWNLTD-----AGFSHLASLT 370
Query: 325 NLESINLS-FTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGA 382
L+ ++LS ++D L LA L++L+ L L R +TD GLA LT LT L HLDL
Sbjct: 371 ALQHLDLSDCENLTDAGLAYLASLTALQYLGLSQCRNLTDVGLAHLTPLTALQHLDLREC 430
Query: 383 -RITDSGAAYLRNFKNLRSLEI 403
++TD+G A + +L+I
Sbjct: 431 DKVTDAGLARFKTLATSLNLKI 452
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 107/190 (56%), Gaps = 4/190 (2%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
++TD+GL HL + LQ L+ ++C +I+D GL HL L++L L+ +T G+
Sbjct: 257 NLTDAGLAHLTPLTALQHLNLSYCWKITDAGLAHLTPLTDLQHLNLSDCENLTDAGLAHL 316
Query: 128 AGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
L L+ L+L +C + GL +L L L+ LN+KWC +TD+ L+ LT L+ L
Sbjct: 317 TPLTALLYLNLSKCYHLTNVGLAHLAPLTGLQYLNLKWCWNLTDAGFSHLASLTALQHLD 376
Query: 187 IS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QLSDD 243
+S C +TD+G+AYL L L L L C +T L L+ L +L +L+L C +++D
Sbjct: 377 LSDCENLTDAGLAYLASLTALQYLGLSQCRNLTDVGLAHLTPLTALQHLDLRECDKVTDA 436
Query: 244 GCEKFSKIGS 253
G +F + +
Sbjct: 437 GLARFKTLAT 446
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 135/256 (52%), Gaps = 9/256 (3%)
Query: 83 LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT 142
+++L+F+ ++D L L+ NL L AIT G+ A L +L L+L C
Sbjct: 197 IEALNFSGNAHLADAHLLALKNCENLKLLHLEACQAITDDGLAHLALLTSLQHLNLYFCV 256
Query: 143 RI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYL 200
+ GL +L L L+ LN+ +C ITD+ + L+ LT+L+ L +S C +TD+G+A+L
Sbjct: 257 NLTDAGLAHLTPLTALQHLNLSYCWKITDAGLAHLTPLTDLQHLNLSDCENLTDAGLAHL 316
Query: 201 KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLN 258
L L LNL C +T L L+ L L YLNL C L+D G + + +L+ L+
Sbjct: 317 TPLTALLYLNLSKCYHLTNVGLAHLAPLTGLQYLNLKWCWNLTDAGFSHLASLTALQHLD 376
Query: 259 LGFNE-ITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSS 315
L E +TD L +L LT L+ L L C + D GL +LT L L+ L+L + +V +
Sbjct: 377 LSDCENLTDAGLAYLASLTALQYLGLSQCRNLTDVGLAHLTPLTALQHLDLRECDKVTDA 436
Query: 316 GLRHLSGLTNLESINL 331
GL L S+NL
Sbjct: 437 GLARFKTLAT--SLNL 450
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 136/256 (53%), Gaps = 10/256 (3%)
Query: 61 SVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAI 119
+++ SG + + D+ L+ LK+C NL+ L C I+D GL HL L++L L+ +
Sbjct: 199 ALNFSGNAHLADAHLLALKNCENLKLLHLEACQAITDDGLAHLALLTSLQHLNLYFCVNL 258
Query: 120 TAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
T G+ L L L+L C +I GL +L L L+ LN+ C +TD+ + L+
Sbjct: 259 TDAGLAHLTPLTALQHLNLSYCWKITDAGLAHLTPLTDLQHLNLSDCENLTDAGLAHLTP 318
Query: 179 LTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLN 236
LT L L +S C +T+ G+A+L L L LNL+ C +T A L++L +L +L+L+
Sbjct: 319 LTALLYLNLSKCYHLTNVGLAHLAPLTGLQYLNLKWCWNLTDAGFSHLASLTALQHLDLS 378
Query: 237 RCQ-LSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGL 293
C+ L+D G + + +L+ L L +TD L HL LT L+ L+L C + D GL
Sbjct: 379 DCENLTDAGLAYLASLTALQYLGLSQCRNLTDVGLAHLTPLTALQHLDLRECDKVTDAGL 438
Query: 294 VNLTGLC---NLKCLE 306
L NLK ++
Sbjct: 439 ARFKTLATSLNLKIIK 454
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 118/218 (54%), Gaps = 24/218 (11%)
Query: 251 IGSLKVLNLGFN-EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLK----- 303
+ ++ LN N + D L+ LK NL+ L+L++C I D+GL +L L +L+
Sbjct: 194 LDEIEALNFSGNAHLADAHLLALKNCENLKLLHLEACQAITDDGLAHLALLTSLQHLNLY 253
Query: 304 -CLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL-DARQI 360
C+ L+D +GL HL+ LT L+ +NLS+ I+D L L L+ L+ LNL D +
Sbjct: 254 FCVNLTD-----AGLAHLTPLTALQHLNLSYCWKITDAGLAHLTPLTDLQHLNLSDCENL 308
Query: 361 TDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICG-GGLTDAG------ 412
TD GLA LT LT L +L+L +T+ G A+L L+ L + LTDAG
Sbjct: 309 TDAGLAHLTPLTALLYLNLSKCYHLTNVGLAHLAPLTGLQYLNLKWCWNLTDAGFSHLAS 368
Query: 413 LTGLVSLNVSN-SRITSAGLRHLKPLKNLRSLTLESCK 449
LT L L++S+ +T AGL +L L L+ L L C+
Sbjct: 369 LTALQHLDLSDCENLTDAGLAYLASLTALQYLGLSQCR 406
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 112/222 (50%), Gaps = 39/222 (17%)
Query: 261 FNEITDECLVHLKGLTNLESLNLDSCGIGD-EGLVNLTGLCNL--KCLELSDTQ------ 311
FN T+E LV LKGL N C + D + + LT + L + +L++ Q
Sbjct: 139 FNS-TEESLVGLKGLLNFAQ----QCQLNDLKNYLELTVVSALLNQASQLTEFQRIINHF 193
Query: 312 ------VGSSGLRHLS-----GLTNLESINL----SFTGISDGSLRKLAGLSSLKSLNLD 356
+ SG HL+ L N E++ L + I+D L LA L+SL+ LNL
Sbjct: 194 LDEIEALNFSGNAHLADAHLLALKNCENLKLLHLEACQAITDDGLAHLALLTSLQHLNLY 253
Query: 357 -ARQITDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG-GGLTDAG- 412
+TD GLA LT LT L HL+L + +ITD+G A+L +L+ L + LTDAG
Sbjct: 254 FCVNLTDAGLAHLTPLTALQHLNLSYCWKITDAGLAHLTPLTDLQHLNLSDCENLTDAGL 313
Query: 413 -----LTGLVSLNVSN-SRITSAGLRHLKPLKNLRSLTLESC 448
LT L+ LN+S +T+ GL HL PL L+ L L+ C
Sbjct: 314 AHLTPLTALLYLNLSKCYHLTNVGLAHLAPLTGLQYLNLKWC 355
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 95/192 (49%), Gaps = 29/192 (15%)
Query: 288 IGDEGLVNLTGLCNLK----CLELSDTQVGSSGLRHLSGLTNLESI---------NLSFT 334
+G +GL+N C L LEL+ V S+ L S LT + I L+F+
Sbjct: 147 VGLKGLLNFAQQCQLNDLKNYLELT---VVSALLNQASQLTEFQRIINHFLDEIEALNFS 203
Query: 335 G---ISDGSLRKLAGLSSLKSLNLDARQ-ITDTGLAALTSLTGLTHLDL-FGARITDSGA 389
G ++D L L +LK L+L+A Q ITD GLA L LT L HL+L F +TD+G
Sbjct: 204 GNAHLADAHLLALKNCENLKLLHLEACQAITDDGLAHLALLTSLQHLNLYFCVNLTDAGL 263
Query: 390 AYLRNFKNLRSLEICG-GGLTDAGL------TGLVSLNVSN-SRITSAGLRHLKPLKNLR 441
A+L L+ L + +TDAGL T L LN+S+ +T AGL HL PL L
Sbjct: 264 AHLTPLTALQHLNLSYCWKITDAGLAHLTPLTDLQHLNLSDCENLTDAGLAHLTPLTALL 323
Query: 442 SLTLESCKVTAN 453
L L C N
Sbjct: 324 YLNLSKCYHLTN 335
>gi|290996041|ref|XP_002680591.1| predicted protein [Naegleria gruberi]
gi|284094212|gb|EFC47847.1| predicted protein [Naegleria gruberi]
Length = 281
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 121/248 (48%)
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
+ LS L LK L I S + D G+ ++ L++LT L++ ++ LS L L +
Sbjct: 17 LNHLSELKQLKKLHIYDSYIGDEGVRFISELKQLTTLDIRNNGISEYGAKYLSELKQLTF 76
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L +++ + G + S++ L +L + N I DE +L L L LN+ IGDEG
Sbjct: 77 LIIDKNNIGAKGSKYISELKQLTILIIDKNNIDDEGAKYLSELKQLTYLNIQDNRIGDEG 136
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
+ L L L +++ Q+G+ G ++LS L +L +N+S I D + L L L
Sbjct: 137 SKYIGELKQLTDLYINNNQIGNEGAKYLSELKHLILLNISNNQIGDEGAKYLCELKQLMD 196
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
L++ I D G+ L+ L LTHLD+ +I D G Y+ K + L I + D G
Sbjct: 197 LDISCNDIGDEGIKYLSGLKQLTHLDISYNKIRDEGVKYISELKEIMYLYINNNYIGDEG 256
Query: 413 LTGLVSLN 420
L +N
Sbjct: 257 TKYLSEMN 264
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 133/259 (51%), Gaps = 3/259 (1%)
Query: 143 RIHGG--LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYL 200
RI G L +L L +L+ L+I + + I D ++ +S L L +L I + +++ G YL
Sbjct: 10 RIKEGEALNHLSELKQLKKLHI-YDSYIGDEGVRFISELKQLTTLDIRNNGISEYGAKYL 68
Query: 201 KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG 260
L++LT L ++ + A +S L L L +++ + D+G + S++ L LN+
Sbjct: 69 SELKQLTFLIIDKNNIGAKGSKYISELKQLTILIIDKNNIDDEGAKYLSELKQLTYLNIQ 128
Query: 261 FNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
N I DE ++ L L L +++ IG+EG L+ L +L L +S+ Q+G G ++L
Sbjct: 129 DNRIGDEGSKYIGELKQLTDLYINNNQIGNEGAKYLSELKHLILLNISNNQIGDEGAKYL 188
Query: 321 SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
L L +++S I D ++ L+GL L L++ +I D G+ ++ L + +L +
Sbjct: 189 CELKQLMDLDISCNDIGDEGIKYLSGLKQLTHLDISYNKIRDEGVKYISELKEIMYLYIN 248
Query: 381 GARITDSGAAYLRNFKNLR 399
I D G YL L+
Sbjct: 249 NNYIGDEGTKYLSEMNQLK 267
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 124/267 (46%), Gaps = 3/267 (1%)
Query: 72 SGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLI 131
L HL + L+ L + I D G+ + L LT+L R NN I+ G K + L
Sbjct: 15 EALNHLSELKQLKKLHI-YDSYIGDEGVRFISELKQLTTLDIR-NNGISEYGAKYLSELK 72
Query: 132 NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK 191
L L +++ G + L +L L I N I D K LS L L L I ++
Sbjct: 73 QLTFLIIDKNNIGAKGSKYISELKQLTILIID-KNNIDDEGAKYLSELKQLTYLNIQDNR 131
Query: 192 VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI 251
+ D G Y+ L++LT L + + LS L L LN++ Q+ D+G + ++
Sbjct: 132 IGDEGSKYIGELKQLTDLYINNNQIGNEGAKYLSELKHLILLNISNNQIGDEGAKYLCEL 191
Query: 252 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ 311
L L++ N+I DE + +L GL L L++ I DEG+ ++ L + L +++
Sbjct: 192 KQLMDLDISCNDIGDEGIKYLSGLKQLTHLDISYNKIRDEGVKYISELKEIMYLYINNNY 251
Query: 312 VGSSGLRHLSGLTNLESINLSFTGISD 338
+G G ++LS + L+ N F D
Sbjct: 252 IGDEGTKYLSEMNQLKDHNKDFQYKED 278
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
+K L KL + EG L+ LS L L L++ + D+G S++ L L++
Sbjct: 1 MKSLTKLKIRIKEG-----EALNHLSELKQLKKLHIYDSYIGDEGVRFISELKQLTTLDI 55
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
N I++ +L L L L +D IG +G ++ L L L + + G ++
Sbjct: 56 RNNGISEYGAKYLSELKQLTFLIIDKNNIGAKGSKYISELKQLTILIIDKNNIDDEGAKY 115
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
LS L L +N+ I D + + L L L ++ QI + G L+ L L L++
Sbjct: 116 LSELKQLTYLNIQDNRIGDEGSKYIGELKQLTDLYINNNQIGNEGAKYLSELKHLILLNI 175
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRH 433
+I D GA YL K L L+I + D +GL L L++S ++I G+++
Sbjct: 176 SNNQIGDEGAKYLCELKQLMDLDISCNDIGDEGIKYLSGLKQLTHLDISYNKIRDEGVKY 235
Query: 434 LKPLKNLRSLTL 445
+ LK + L +
Sbjct: 236 ISELKEIMYLYI 247
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
E L HL L L+ L++ IGDEG+ ++ L L L++ + + G ++LS L L
Sbjct: 15 EALNHLSELKQLKKLHIYDSYIGDEGVRFISELKQLTTLDIRNNGISEYGAKYLSELKQL 74
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
+ + I + ++ L L L +D I D G L+ L LT+L++ RI D
Sbjct: 75 TFLIIDKNNIGAKGSKYISELKQLTILIIDKNNIDDEGAKYLSELKQLTYLNIQDNRIGD 134
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNL 440
G+ Y+ K L L I + + G L L+ LN+SN++I G ++L LK L
Sbjct: 135 EGSKYIGELKQLTDLYINNNQIGNEGAKYLSELKHLILLNISNNQIGDEGAKYLCELKQL 194
Query: 441 RSLTLESCKVTANDI 455
L + SC NDI
Sbjct: 195 MDLDI-SC----NDI 204
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 81/174 (46%), Gaps = 2/174 (1%)
Query: 94 ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG 153
I D G ++L L LT L+ + +N I +G K L L L + + G L
Sbjct: 108 IDDEGAKYLSELKQLTYLNIQ-DNRIGDEGSKYIGELKQLTDLYINNNQIGNEGAKYLSE 166
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
L L LNI N I D K L L L L ISC+ + D GI YL GL++LT L++
Sbjct: 167 LKHLILLNIS-NNQIGDEGAKYLCELKQLMDLDISCNDIGDEGIKYLSGLKQLTHLDISY 225
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
+ + +S L + YL +N + D+G + S++ LK N F DE
Sbjct: 226 NKIRDEGVKYISELKEIMYLYINNNYIGDEGTKYLSEMNQLKDHNKDFQYKEDE 279
>gi|290974856|ref|XP_002670160.1| predicted protein [Naegleria gruberi]
gi|284083716|gb|EFC37416.1| predicted protein [Naegleria gruberi]
Length = 376
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 164/341 (48%), Gaps = 11/341 (3%)
Query: 130 LINLVKLDLERCTRIHGGLVNLKGLMK-LESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
L N+ L LER R + GLMK L L+ + NCI +K + + NL L I
Sbjct: 35 LENIENLRLERNNRFFD--CQIIGLMKGLTVLSAE--NCIGTEGVKHICKMNNLTKLNIE 90
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
+++ + G Y+ +++LT LN+ + ++ +S L +L L + C++ D+G +
Sbjct: 91 RNEIGEEGAKYISKMKQLTELNVGWNGIGKEGVEFISELKNLTLLEIEACRICDEGAKSI 150
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
S++ L LN+ +N I++ +L L L L L C I +EG ++ L L L++S
Sbjct: 151 SELKQLTHLNISYNNISNLGSKYLTELKQLTVLTLCDCNISEEGCKYISELNQLTDLDIS 210
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
+ +G +G+ ++SG+ L + + T + L+K++ + + +LN+ + D G +
Sbjct: 211 NNDIGCNGVEYISGMKQLLFLYIYGTNMYPTELQKISEMKQVTNLNISWNYVGDEGAKYI 270
Query: 369 TSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLN------VS 422
+ + LT L++ + I+ GA ++ K L L I + G + +N +S
Sbjct: 271 SDMKQLTKLEVVRSDISTEGAKHISELKQLTDLNIGENNIGGEGAIAISKMNQLRILDIS 330
Query: 423 NSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDL 463
++ I G H+ +K L L + + KR+ + L
Sbjct: 331 DNNIGGIGAEHVSQMKQLTHLDISHNCIGNYGAKRINTMKL 371
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 2/303 (0%)
Query: 94 ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG 153
I G++H+ ++NLT L+ R N I +G K + + L +L++ G+ +
Sbjct: 70 IGTEGVKHICKMNNLTKLNIER-NEIGEEGAKYISKMKQLTELNVGWNGIGKEGVEFISE 128
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
L L L I+ C I D K +S L L L IS + +++ G YL L++LT+L L
Sbjct: 129 LKNLTLLEIEACR-ICDEGAKSISELKQLTHLNISYNNISNLGSKYLTELKQLTVLTLCD 187
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
C ++ +S L L L+++ + +G E S + L L + + L +
Sbjct: 188 CNISEEGCKYISELNQLTDLDISNNDIGCNGVEYISGMKQLLFLYIYGTNMYPTELQKIS 247
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
+ + +LN+ +GDEG ++ + L LE+ + + + G +H+S L L +N+
Sbjct: 248 EMKQVTNLNISWNYVGDEGAKYISDMKQLTKLEVVRSDISTEGAKHISELKQLTDLNIGE 307
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
I ++ ++ L+ L++ I G ++ + LTHLD+ I + GA +
Sbjct: 308 NNIGGEGAIAISKMNQLRILDISDNNIGGIGAEHVSQMKQLTHLDISHNCIGNYGAKRIN 367
Query: 394 NFK 396
K
Sbjct: 368 TMK 370
>gi|290993162|ref|XP_002679202.1| predicted protein [Naegleria gruberi]
gi|284092818|gb|EFC46458.1| predicted protein [Naegleria gruberi]
Length = 345
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 162/337 (48%), Gaps = 13/337 (3%)
Query: 122 QGMKAFAGLINLVKLDLERC-TRIHGGLVNLKGLMKLE-SLNIKWCNCITDSDMKPLSGL 179
Q K GL L +L + R G + LK L L N WC T +K L
Sbjct: 14 QDAKYIGGLKQLTRLTIYSSHIRDIGKISELKQLTYLNVPANGIWC--YTTKQVKEFKQL 71
Query: 180 TNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ 239
T +L I ++V G Y+ L++LT L+++ + ++ LS L L YLN++
Sbjct: 72 T---TLIIDQNQVGSEGCKYISELKQLTSLSIDENFIYDEGVEYLSELAQLTYLNISNNG 128
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
+ +GC+ K+ L L N I E ++ L L+ L++ IGD+GL ++ L
Sbjct: 129 VGSEGCKYVGKMKRLTSLGFYNNRIGKEGAKYISTLNQLKQLDISRTNIGDKGLEHIGQL 188
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 359
L L+L ++G+ G ++LS L L +N+S I + ++ + L L +L ++ +
Sbjct: 189 SQLTSLDLYCNKIGNGGAKYLSELKQLTYLNISENHIGNEGIKYIGELKQLVNLIINNNR 248
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------L 413
I + G+ + L LT+L++ RI + G Y+ + K L ++ I + G L
Sbjct: 249 IGNDGVKYIGELKQLTYLNISENRIGNEGIKYIGDLKQLTNIIISRNWIGSEGAKYIGKL 308
Query: 414 TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
+ L SL +S++ I + G ++L LK L L +E K+
Sbjct: 309 SQLTSLGLSSNNIDNEGAKYLSELKELSFLNIERNKI 345
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 128/289 (44%), Gaps = 44/289 (15%)
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
+ D K + GL L L I S + D I + L++LT LN+ + +
Sbjct: 13 EQDAKYIGGLKQLTRLTIYSSHIRD--IGKISELKQLTYLNVPANGIWCYTTKQVKEFKQ 70
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L L +++ Q+ +GC+ S++ L L++ N I DE + +L L L LN+ + G+G
Sbjct: 71 LTTLIIDQNQVGSEGCKYISELKQLTSLSIDENFIYDEGVEYLSELAQLTYLNISNNGVG 130
Query: 290 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 349
EG + + L L + ++G G +++S L L+ +++S T I D
Sbjct: 131 SEGCKYVGKMKRLTSLGFYNNRIGKEGAKYISTLNQLKQLDISRTNIGD----------- 179
Query: 350 LKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLT 409
GL + L+ LT LDL+ +I + GA YL K L
Sbjct: 180 -------------KGLEHIGQLSQLTSLDLYCNKIGNGGAKYLSELKQL----------- 215
Query: 410 DAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
LN+S + I + G++++ LK L +L + + ++ + +K +
Sbjct: 216 -------TYLNISENHIGNEGIKYIGELKQLVNLIINNNRIGNDGVKYI 257
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 3/184 (1%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+ L +D+S +++ D GL H+ S L SLD +C +I +GG ++L L LT L+ N
Sbjct: 165 NQLKQLDISRTNIGDKGLEHIGQLSQLTSLDL-YCNKIGNGGAKYLSELKQLTYLNISEN 223
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+ I +G+K L LV L + + G+ + L +L LNI N I + +K +
Sbjct: 224 H-IGNEGIKYIGELKQLVNLIINNNRIGNDGVKYIGELKQLTYLNIS-ENRIGNEGIKYI 281
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
L L ++ IS + + G Y+ L +LT L L + LS L L +LN+
Sbjct: 282 GDLKQLTNIIISRNWIGSEGAKYIGKLSQLTSLGLSSNNIDNEGAKYLSELKELSFLNIE 341
Query: 237 RCQL 240
R ++
Sbjct: 342 RNKI 345
>gi|290972120|ref|XP_002668808.1| predicted protein [Naegleria gruberi]
gi|284082332|gb|EFC36064.1| predicted protein [Naegleria gruberi]
Length = 329
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 160/341 (46%), Gaps = 20/341 (5%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW 164
++ LTSL +N I +G K + + L LD+ G + + L SL+I
Sbjct: 1 MNQLTSLDMH-SNEIGVEGSKYISEMKQLTSLDIYSNEIGVEGAKYISEMKSLTSLDI-H 58
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
N I K +S + L SL I +++ G Y+ + +LT L++ + +
Sbjct: 59 SNEIGVEGSKYISEMKQLTSLNIGYNQIGVEGSKYISEMNQLTSLDIHSNEIGVEGSKYI 118
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
S + L LN+ Q+S +G + S + SL L +G+N+I E ++ + L SLN+
Sbjct: 119 SEMKQLTSLNIGYNQISVEGAKYISGMKSLTSLYIGYNQIGVEGSKYISEMKQLTSLNIG 178
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
IG+EG ++G+ +L L + Q+G G +++S + L S+N+ IS + +
Sbjct: 179 HNEIGEEGAKYISGMKSLTSLNIGYNQIGVEGSKYISEMKQLTSLNIGHNEISVEGSKYI 238
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
+G+ SL SLN+ QI G ++ + LT L++ I GA Y+
Sbjct: 239 SGMKSLTSLNIGYNQIGVEGSKYISEMKQLTSLNIGYNEIGVEGAKYI------------ 286
Query: 405 GGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
+G+ L SLN+ ++I G +++ +K L SL +
Sbjct: 287 ------SGMKSLTSLNIGYNQIGVEGSKYISEMKQLTSLNI 321
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 158/310 (50%), Gaps = 15/310 (4%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L S+D+ +++ G ++ + +L SLD + +I G +++ + LTSL+ N
Sbjct: 28 LTSLDIYSNEIGVEGAKYISEMKSLTSLDIH-SNEIGVEGSKYISEMKQLTSLNIGY-NQ 85
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG------LMKLESLNIKWCNCITDSD 172
I +G K + + L LD IH + ++G + +L SLNI + N I+
Sbjct: 86 IGVEGSKYISEMNQLTSLD------IHSNEIGVEGSKYISEMKQLTSLNIGY-NQISVEG 138
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
K +SG+ +L SL I +++ G Y+ +++LT LN+ + +S + SL
Sbjct: 139 AKYISGMKSLTSLYIGYNQIGVEGSKYISEMKQLTSLNIGHNEIGEEGAKYISGMKSLTS 198
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
LN+ Q+ +G + S++ L LN+G NEI+ E ++ G+ +L SLN+ IG EG
Sbjct: 199 LNIGYNQIGVEGSKYISEMKQLTSLNIGHNEISVEGSKYISGMKSLTSLNIGYNQIGVEG 258
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
++ + L L + ++G G +++SG+ +L S+N+ + I + ++ + L S
Sbjct: 259 SKYISEMKQLTSLNIGYNEIGVEGAKYISGMKSLTSLNIGYNQIGVEGSKYISEMKQLTS 318
Query: 353 LNLDARQITD 362
LN+ +I +
Sbjct: 319 LNIGHNEIGE 328
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 141/285 (49%), Gaps = 3/285 (1%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ SL S+D+ +++ G ++ + L SL+ + QI G +++ ++ LTSL
Sbjct: 47 SEMKSLTSLDIHSNEIGVEGSKYISEMKQLTSLNIGYN-QIGVEGSKYISEMNQLTSLDI 105
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
+N I +G K + + L L++ G + G+ L SL I + N I
Sbjct: 106 H-SNEIGVEGSKYISEMKQLTSLNIGYNQISVEGAKYISGMKSLTSLYIGY-NQIGVEGS 163
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K +S + L SL I +++ + G Y+ G++ LT LN+ + +S + L L
Sbjct: 164 KYISEMKQLTSLNIGHNEIGEEGAKYISGMKSLTSLNIGYNQIGVEGSKYISEMKQLTSL 223
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
N+ ++S +G + S + SL LN+G+N+I E ++ + L SLN+ IG EG
Sbjct: 224 NIGHNEISVEGSKYISGMKSLTSLNIGYNQIGVEGSKYISEMKQLTSLNIGYNEIGVEGA 283
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
++G+ +L L + Q+G G +++S + L S+N+ I +
Sbjct: 284 KYISGMKSLTSLNIGYNQIGVEGSKYISEMKQLTSLNIGHNEIGE 328
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 119/238 (50%), Gaps = 3/238 (1%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ + L S+D+ +++ G ++ + L SL+ + QIS G +++ G+ +LTSL +
Sbjct: 95 SEMNQLTSLDIHSNEIGVEGSKYISEMKQLTSLNIGYN-QISVEGAKYISGMKSLTSL-Y 152
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
N I +G K + + L L++ G + G+ L SLNI + N I
Sbjct: 153 IGYNQIGVEGSKYISEMKQLTSLNIGHNEIGEEGAKYISGMKSLTSLNIGY-NQIGVEGS 211
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K +S + L SL I ++++ G Y+ G++ LT LN+ + +S + L L
Sbjct: 212 KYISEMKQLTSLNIGHNEISVEGSKYISGMKSLTSLNIGYNQIGVEGSKYISEMKQLTSL 271
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
N+ ++ +G + S + SL LN+G+N+I E ++ + L SLN+ IG+E
Sbjct: 272 NIGYNEIGVEGAKYISGMKSLTSLNIGYNQIGVEGSKYISEMKQLTSLNIGHNEIGEE 329
>gi|307108381|gb|EFN56621.1| hypothetical protein CHLNCDRAFT_57520 [Chlorella variabilis]
Length = 790
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 141/450 (31%), Positives = 216/450 (48%), Gaps = 63/450 (14%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTD--SGLIHLKDCSNLQSLDFNFCIQISDGGLE 100
V D ++ +A + L ++D++G + VTD +G L L L+ C ++D GLE
Sbjct: 338 VGDGVLEAVA-RCRGLRALDMAGCTGVTDEGTGFTQLSRLQQLSELNLKGCYSLADDGLE 396
Query: 101 HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGG----LVNLKGLMK 156
L L +L +L+ + +T +G+ +GL L L+L+ C + G L L L +
Sbjct: 397 LLPTLRSLAALNLQECWQVTDRGLAHLSGLTRLEDLNLQGCRNLANGAGQSLSGLGALHR 456
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP 215
L SL ++ C+ + D + L GLT+L+ L +S C ++T G+A L L+ L L L+ C
Sbjct: 457 LTSLCMRGCDRLADGALDFLPGLTSLRQLDLSGCKELTADGLAPLSSLRLLACLRLQHCS 516
Query: 216 --VTAACLDSLSALGSLFYLNLNRC------------------QLSDDGCEKFSKIGSLK 255
AA L LS L SL LNL C QLS +GC +
Sbjct: 517 GLRGAAALRPLSTLSSLTALNLGGCTAIHGQSLRALGTLSALRQLSLEGCR------GVV 570
Query: 256 VLNLGFNEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSD----T 310
+L+ G + L L SLNL C + D GL + L L L LS+ T
Sbjct: 571 LLDAGLEALAPS-------LHRLTSLNLQGCSTLTDAGLQKMGPLTGLVSLNLSECPSIT 623
Query: 311 QVGSSGLRHLSGLTNLESINLSFT-GISDGSLRKLAGLSSLKSLNL-DARQITDTGLAAL 368
G++ R + L S+ L + G+ D L LAGL++L+SLNL +++ D GLAA+
Sbjct: 624 GAGAAAWR----MPLLASLQLQNSPGVDDAGLAALAGLTALRSLNLKQCKRVGDGGLAAM 679
Query: 369 T-SLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEI-CGGGLTDAGLTGLVSLN----- 420
+L LT L L G + +TD+G A L ++L+ LE+ DAG+ L L+
Sbjct: 680 APALQRLTALCLQGMSEVTDAGVAQLGALRSLQDLELQFAWQFGDAGIAALTRLSALSRL 739
Query: 421 --VSNSRITSAGLRHLKPLKNLRSLTLESC 448
+ + +IT LR L + +L SL + C
Sbjct: 740 DLMYSWKITDDSLRSLGRMTSLLSLNVLGC 769
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 169/347 (48%), Gaps = 41/347 (11%)
Query: 124 MKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
++A A L LD+ CT + G L L +L LN+K C + D ++ L L
Sbjct: 343 LEAVARCRGLRALDMAGCTGVTDEGTGFTQLSRLQQLSELNLKGCYSLADDGLELLPTLR 402
Query: 181 NLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTA-ACLDSLSALGSLFYLNLNRC 238
+L +L + C +VTD G+A+L GL +L LNL+GC A SLS LG+L L
Sbjct: 403 SLAALNLQECWQVTDRGLAHLSGLTRLEDLNLQGCRNLANGAGQSLSGLGALHRLT---- 458
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLT 297
L GC++ + D L L GLT+L L+L C + +GL L+
Sbjct: 459 SLCMRGCDRLA----------------DGALDFLPGLTSLRQLDLSGCKELTADGLAPLS 502
Query: 298 GLCNLKCLELSDTQ--VGSSGLRHLSGLTNLESINLS-FTGISDGSLRKLAGLSSLKSLN 354
L L CL L G++ LR LS L++L ++NL T I SLR L LS+L+ L+
Sbjct: 503 SLRLLACLRLQHCSGLRGAAALRPLSTLSSLTALNLGGCTAIHGQSLRALGTLSALRQLS 562
Query: 355 LDARQ---ITDTGLAALT-SLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSL------EI 403
L+ + + D GL AL SL LT L+L G + +TD+G + L SL I
Sbjct: 563 LEGCRGVVLLDAGLEALAPSLHRLTSLNLQGCSTLTDAGLQKMGPLTGLVSLNLSECPSI 622
Query: 404 CGGGLTDAGLTGLVSLNVSNSR-ITSAGLRHLKPLKNLRSLTLESCK 449
G G + L SL + NS + AGL L L LRSL L+ CK
Sbjct: 623 TGAGAAAWRMPLLASLQLQNSPGVDDAGLAALAGLTALRSLNLKQCK 669
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 168/394 (42%), Gaps = 70/394 (17%)
Query: 126 AFAGLINLVKLDLERCTRIHGG-LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A A ++ L+L C ++ L ++ L L ++++ C +TD + L+ L L
Sbjct: 174 AAASFPSVQVLELGHCRQLQDWDLADVALLSTLRCVSLRGCEGVTDEGVAQLARLPRLSR 233
Query: 185 LQI-SCSKVTDSGIAYLKGLQKLTLLNL-----------------EGCPVTAACLDSLSA 226
L + +C K+TD G+A L G+ L L G + AA
Sbjct: 234 LVLRNCVKLTDVGLARLAGVSGRELPQLWAPAGPGSPPPVPRLRSPGARLPAAAAPPPCR 293
Query: 227 LGSLFYLNLNRCQLSDD--------------------GCEKFSKIG-----------SLK 255
L L+L C L + GC + S +G L+
Sbjct: 294 RPPLASLDLAGCVLLTERGFAAAASGLAASLTELLLGGCSRVSTVGDGVLEAVARCRGLR 353
Query: 256 VLNL-GFNEITDE--CLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-T 310
L++ G +TDE L L L LNL C + D+GL L L +L L L +
Sbjct: 354 ALDMAGCTGVTDEGTGFTQLSRLQQLSELNLKGCYSLADDGLELLPTLRSLAALNLQECW 413
Query: 311 QVGSSGLRHLSGLTNLESINLS-FTGISDGSLRKLAGLSSLKSL-NLDAR---QITDTGL 365
QV GL HLSGLT LE +NL +++G+ + L+GL +L L +L R ++ D L
Sbjct: 414 QVTDRGLAHLSGLTRLEDLNLQGCRNLANGAGQSLSGLGALHRLTSLCMRGCDRLADGAL 473
Query: 366 AALTSLTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEI--CGGGLTDAG------LTGL 416
L LT L LDL G + +T G A L + + L L + C G A L+ L
Sbjct: 474 DFLPGLTSLRQLDLSGCKELTADGLAPLSSLRLLACLRLQHCSGLRGAAALRPLSTLSSL 533
Query: 417 VSLNVSN-SRITSAGLRHLKPLKNLRSLTLESCK 449
+LN+ + I LR L L LR L+LE C+
Sbjct: 534 TALNLGGCTAIHGQSLRALGTLSALRQLSLEGCR 567
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 34 QDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCI 92
+ L L Q V D + +A L ++ L G S+VTD+G+ L +LQ L+ F
Sbjct: 661 RSLNLKQCKRVGDGGLAAMAPALQRLTALCLQGMSEVTDAGVAQLGALRSLQDLELQFAW 720
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGG 147
Q D G+ L LS L+ L + IT +++ + +L+ L++ C R+ G
Sbjct: 721 QFGDAGIAALTRLSALSRLDLMYSWKITDDSLRSLGRMTSLLSLNVLGCHRLTPG 775
>gi|335058613|gb|AEH26502.1| leucine-rich repeat domain protein [uncultured Acidobacteria
bacterium A11]
Length = 402
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 2/257 (0%)
Query: 112 SFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDS 171
S++RN+ + + A L +L+ LDL GL + L LE LN+ +TD+
Sbjct: 136 SYKRNDTLVDAWLDRLADLPDLISLDLANTGVAGPGLKVVGTLKNLERLNLT-LTPVTDA 194
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
++ L+GLTNL+ L ++ +K T G +L L++L N PV A L +S + L
Sbjct: 195 HLEHLAGLTNLRVLSLASAKCTGEGFRFLGKLKQLENANFHFTPVNDAGLAGISTVTGLE 254
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
L + C +D G +K+ +L+ L +G + T + L LT L L+L E
Sbjct: 255 RLEIVHCHFTDAGAPHLAKLVNLERLQIGSRDATGAAIEPLTALTKLRELDLQDNQATAE 314
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
G+ + + + +L+ L + Q+ G ++ L+NLE + + G++D +L A L L+
Sbjct: 315 GVRHASRIPSLRVLRIHG-QIKDEGAASIAQLSNLEILVANNAGLTDDALDHFARLPRLQ 373
Query: 352 SLNLDARQITDTGLAAL 368
L + +ITD LA L
Sbjct: 374 RLEIKGNKITDPALARL 390
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 120/257 (46%), Gaps = 6/257 (2%)
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
A LD L+ L L L+L ++ G + + +L+ LNL +TD L HL GLTNL
Sbjct: 146 AWLDRLADLPDLISLDLANTGVAGPGLKVVGTLKNLERLNLTLTPVTDAHLEHLAGLTNL 205
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
L+L S EG L L L+ T V +GL +S +T LE + + +D
Sbjct: 206 RVLSLASAKCTGEGFRFLGKLKQLENANFHFTPVNDAGLAGISTVTGLERLEIVHCHFTD 265
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 398
LA L +L+ L + +R T + LT+LT L LDL + T G + +L
Sbjct: 266 AGAPHLAKLVNLERLQIGSRDATGAAIEPLTALTKLRELDLQDNQATAEGVRHASRIPSL 325
Query: 399 RSLEICG-----GGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAN 453
R L I G G + A L+ L L +N+ +T L H L L+ L ++ K+T
Sbjct: 326 RVLRIHGQIKDEGAASIAQLSNLEILVANNAGLTDDALDHFARLPRLQRLEIKGNKITDP 385
Query: 454 DIKRLQSRDLPNLVSFR 470
+ RLQ + LP L R
Sbjct: 386 ALARLQ-QALPALEVVR 401
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 119/254 (46%), Gaps = 1/254 (0%)
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
K + + D+ + L+ L +L SL ++ + V G+ + L+ L LNL PVT A L+
Sbjct: 138 KRNDTLVDAWLDRLADLPDLISLDLANTGVAGPGLKVVGTLKNLERLNLTLTPVTDAHLE 197
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
L+ L +L L+L + + +G K+ L+ N F + D L + +T LE L
Sbjct: 198 HLAGLTNLRVLSLASAKCTGEGFRFLGKLKQLENANFHFTPVNDAGLAGISTVTGLERLE 257
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
+ C D G +L L NL+ L++ + + L+ LT L ++L + +R
Sbjct: 258 IVHCHFTDAGAPHLAKLVNLERLQIGSRDATGAAIEPLTALTKLRELDLQDNQATAEGVR 317
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
+ + SL+ L + QI D G A++ L+ L L A +TD + L+ LE
Sbjct: 318 HASRIPSLRVLRIHG-QIKDEGAASIAQLSNLEILVANNAGLTDDALDHFARLPRLQRLE 376
Query: 403 ICGGGLTDAGLTGL 416
I G +TD L L
Sbjct: 377 IKGNKITDPALARL 390
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 131/285 (45%), Gaps = 30/285 (10%)
Query: 46 DKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGL 105
D W+D +A L+S+DL+ + V GL + NL+ L+ ++D LEHL GL
Sbjct: 145 DAWLDRLADL-PDLISLDLANTGVAGPGLKVVGTLKNLERLNLTLT-PVTDAHLEHLAGL 202
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC 165
+NL LS L +CT G L L +LE+ N +
Sbjct: 203 TNLRVLS-----------------------LASAKCT--GEGFRFLGKLKQLENANFHFT 237
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
+ D+ + +S +T L+ L+I TD+G +L L L L + T A ++ L+
Sbjct: 238 -PVNDAGLAGISTVTGLERLEIVHCHFTDAGAPHLAKLVNLERLQIGSRDATGAAIEPLT 296
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
AL L L+L Q + +G S+I SL+VL + +I DE + L+NLE L ++
Sbjct: 297 ALTKLRELDLQDNQATAEGVRHASRIPSLRVLRI-HGQIKDEGAASIAQLSNLEILVANN 355
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL-SGLTNLESI 329
G+ D+ L + L L+ LE+ ++ L L L LE +
Sbjct: 356 AGLTDDALDHFARLPRLQRLEIKGNKITDPALARLQQALPALEVV 400
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 112/231 (48%), Gaps = 18/231 (7%)
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
+SL L L ++LN Q D K + + + D L L L +L SL
Sbjct: 113 ESLHLLDRLTAIDLNDRQSPHDKSYKRN------------DTLVDAWLDRLADLPDLISL 160
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 341
+L + G+ GL + L NL+ L L+ T V + L HL+GLTNL ++L+ +
Sbjct: 161 DLANTGVAGPGLKVVGTLKNLERLNLTLTPVTDAHLEHLAGLTNLRVLSLASAKCTGEGF 220
Query: 342 RKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
R L L L++ N + D GLA ++++TGL L++ TD+GA +L NL L
Sbjct: 221 RFLGKLKQLENANFHFTPVNDAGLAGISTVTGLERLEIVHCHFTDAGAPHLAKLVNLERL 280
Query: 402 EICGGGLTDA------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
+I T A LT L L++ +++ T+ G+RH + +LR L +
Sbjct: 281 QIGSRDATGAAIEPLTALTKLRELDLQDNQATAEGVRHASRIPSLRVLRIH 331
>gi|406830019|ref|ZP_11089613.1| hypothetical protein SpalD1_00225 [Schlesneria paludicola DSM
18645]
Length = 509
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 180/372 (48%), Gaps = 35/372 (9%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L +++L+G+D+TD+ L+D +L LD +ISD +E L L NL L +
Sbjct: 118 NALGTLNLNGTDITDADFSELRDLRHLSLLDLG-GTRISDASIEGLSQLKNLKEL-WIDG 175
Query: 117 NAITAQGMKAFA-GLIN-LVKLD-------LERCTRIHGGLVNLKGLMKLESLNIKWCNC 167
IT G+++ L N +V D +E + GG+ + + + + +
Sbjct: 176 TEITDAGVQSLKEALPNAIVGKDAPDESQAIETIRSLGGGVTRDEAVAGRPVIEVGFGGF 235
Query: 168 ITDSDMKP-------LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC 220
+ D+ P LS + +SL+ ++ SG A G TA
Sbjct: 236 L---DVGPKTTIEEVLSAVKQFRSLR--TLQLGSSGDAS------------HGLLATADG 278
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
+S L +L L + +++D G ++ S++ L+ L L +IT++ + + L NL +
Sbjct: 279 WKEISELNNLTRLTIIGIEITDAGLKEISRLSQLESLRLINLKITNQGMKEIGKLKNLTN 338
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
L L + D GL L GL L L L++ + GLR + LT+L +++ T I+D
Sbjct: 339 LGLFDVQLTDAGLNQLRGLQRLDTLSLNNNPISDEGLRQVGALTSLTFLSVPSTEITDNG 398
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRS 400
L+ L GLSSLK+L L + +I+D GL L L L LDL G R+T +G LR ++L S
Sbjct: 399 LKGLRGLSSLKNLCLASTRISDDGLKGLIGLNNLEQLDLAGTRVTGTGVGPLRELESLHS 458
Query: 401 LEICGGGLTDAG 412
L + ++D G
Sbjct: 459 LGLSNTQISDEG 470
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 149/318 (46%), Gaps = 56/318 (17%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
I+D+ ++ LS L NLK L I +++TD+G+ LK ++ + P + ++++ +L
Sbjct: 154 ISDASIEGLSQLKNLKELWIDGTEITDAGVQSLKEALPNAIVG-KDAPDESQAIETIRSL 212
Query: 228 GSLF-------------------------------------YLNLNRCQL---------- 240
G + +L QL
Sbjct: 213 GGGVTRDEAVAGRPVIEVGFGGFLDVGPKTTIEEVLSAVKQFRSLRTLQLGSSGDASHGL 272
Query: 241 --SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
+ DG ++ S++ +L L + EITD L + L+ LESL L + I ++G+ +
Sbjct: 273 LATADGWKEISELNNLTRLTIIGIEITDAGLKEISRLSQLESLRLINLKITNQGMKEIGK 332
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L NL L L D Q+ +GL L GL L++++L+ ISD LR++ L+SL L++ +
Sbjct: 333 LKNLTNLGLFDVQLTDAGLNQLRGLQRLDTLSLNNNPISDEGLRQVGALTSLTFLSVPST 392
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------ 412
+ITD GL L L+ L +L L RI+D G L NL L++ G +T G
Sbjct: 393 EITDNGLKGLRGLSSLKNLCLASTRISDDGLKGLIGLNNLEQLDLAGTRVTGTGVGPLRE 452
Query: 413 LTGLVSLNVSNSRITSAG 430
L L SL +SN++I+ G
Sbjct: 453 LESLHSLGLSNTQISDEG 470
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 130/293 (44%), Gaps = 57/293 (19%)
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
L S +ALG+L NLN ++D + + L +L+LG I+D + L L NL+
Sbjct: 114 LKSFNALGTL---NLNGTDITDADFSELRDLRHLSLLDLGGTRISDASIEGLSQLKNLKE 170
Query: 281 LNLDSCGIGDEGLVNLT-GLCN-LKCLELSDTQVGSSGLRHL-SGLTNLES------INL 331
L +D I D G+ +L L N + + D +R L G+T E+ I +
Sbjct: 171 LWIDGTEITDAGVQSLKEALPNAIVGKDAPDESQAIETIRSLGGGVTRDEAVAGRPVIEV 230
Query: 332 SFTGISD-------------------------GS--------------LRKLAGLSSLKS 352
F G D GS ++++ L++L
Sbjct: 231 GFGGFLDVGPKTTIEEVLSAVKQFRSLRTLQLGSSGDASHGLLATADGWKEISELNNLTR 290
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
L + +ITD GL ++ L+ L L L +IT+ G + KNL +L + LTDAG
Sbjct: 291 LTIIGIEITDAGLKEISRLSQLESLRLINLKITNQGMKEIGKLKNLTNLGLFDVQLTDAG 350
Query: 413 LTGLV------SLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
L L +L+++N+ I+ GLR + L +L L++ S ++T N +K L+
Sbjct: 351 LNQLRGLQRLDTLSLNNNPISDEGLRQVGALTSLTFLSVPSTEITDNGLKGLR 403
>gi|59802548|gb|AAX07514.1| putative regulatory subunit [Gemmata sp. Wa1-1]
Length = 250
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 111/207 (53%), Gaps = 2/207 (0%)
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
S+ + KVTD+ + L L+ LT LNL VT A L LS L L +L L + +++D
Sbjct: 23 SVDFALWKVTDADLKELAPLKNLTQLNLCLTKVTDAGLKELSPLTKLTHLCLMQTKVTDA 82
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
G ++ + + +L L LG ++TD L L LTNL L L S + D GL L L +L
Sbjct: 83 GLKELAPLTNLTTLELGSTQVTDAGLKELAPLTNLTVLTLGSTQVTDAGLKELAPLKSLT 142
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
LEL +TQ+ +G++ L+ T L ++LS T ++D ++ LA + L LNL +TDT
Sbjct: 143 LLELGETQITEAGIKELAPFTKLTRLDLSITRVTDAGVKGLAPFTKLTQLNLGGTLVTDT 202
Query: 364 GLAALTSLTGLTHLDLFGARITDSGAA 390
L L L L L L +R GAA
Sbjct: 203 CLKDLAPLKNLAFLSL--SRNERDGAA 227
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 104/207 (50%), Gaps = 18/207 (8%)
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
+++D ++ + + +L LNL ++TD L L LT L L L + D GL L
Sbjct: 30 KVTDADLKELAPLKNLTQLNLCLTKVTDAGLKELSPLTKLTHLCLMQTKVTDAGLKELAP 89
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L NL LEL TQV +GL+ L+ LTNL + L T ++D L++LA L SL L L
Sbjct: 90 LTNLTTLELGSTQVTDAGLKELAPLTNLTVLTLGSTQVTDAGLKELAPLKSLTLLELGET 149
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS 418
QIT+ G+ L T LT LDL R+TD+G L F T L
Sbjct: 150 QITEAGIKELAPFTKLTRLDLSITRVTDAGVKGLAPF------------------TKLTQ 191
Query: 419 LNVSNSRITSAGLRHLKPLKNLRSLTL 445
LN+ + +T L+ L PLKNL L+L
Sbjct: 192 LNLGGTLVTDTCLKDLAPLKNLAFLSL 218
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 100/188 (53%)
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
VT A L L+ L +L LNL +++D G ++ S + L L L ++TD L L L
Sbjct: 31 VTDADLKELAPLKNLTQLNLCLTKVTDAGLKELSPLTKLTHLCLMQTKVTDAGLKELAPL 90
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 335
TNL +L L S + D GL L L NL L L TQV +GL+ L+ L +L + L T
Sbjct: 91 TNLTTLELGSTQVTDAGLKELAPLTNLTVLTLGSTQVTDAGLKELAPLKSLTLLELGETQ 150
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF 395
I++ +++LA + L L+L ++TD G+ L T LT L+L G +TD+ L
Sbjct: 151 ITEAGIKELAPFTKLTRLDLSITRVTDAGVKGLAPFTKLTQLNLGGTLVTDTCLKDLAPL 210
Query: 396 KNLRSLEI 403
KNL L +
Sbjct: 211 KNLAFLSL 218
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 111/231 (48%), Gaps = 29/231 (12%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI-QISDGGLEHLRGLSNLTSLS 112
+ G ++SVD + VTD+ L L NL L N C+ +++D GL+ L L+ LT L
Sbjct: 16 APGKPVISVDFALWKVTDADLKELAPLKNLTQL--NLCLTKVTDAGLKELSPLTKLTHLC 73
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
+ +T G+K A L NL L+L +TD+
Sbjct: 74 LMQTK-VTDAGLKELAPLTNLTTLEL-------------------------GSTQVTDAG 107
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
+K L+ LTNL L + ++VTD+G+ L L+ LTLL L +T A + L+ L
Sbjct: 108 LKELAPLTNLTVLTLGSTQVTDAGLKELAPLKSLTLLELGETQITEAGIKELAPFTKLTR 167
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
L+L+ +++D G + + L LNLG +TD CL L L NL L+L
Sbjct: 168 LDLSITRVTDAGVKGLAPFTKLTQLNLGGTLVTDTCLKDLAPLKNLAFLSL 218
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 104/208 (50%), Gaps = 20/208 (9%)
Query: 246 EKFSKIGSLKVLNLGFN--EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
E+ K V+++ F ++TD L L L NL LNL + D GL L+ L L
Sbjct: 11 ERDEKAPGKPVISVDFALWKVTDADLKELAPLKNLTQLNLCLTKVTDAGLKELSPLTKLT 70
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
L L T+V +GL+ L+ LTNL ++ L T ++D L++LA L++L L L + Q+TD
Sbjct: 71 HLCLMQTKVTDAGLKELAPLTNLTTLELGSTQVTDAGLKELAPLTNLTVLTLGSTQVTDA 130
Query: 364 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN 423
GL L L LT L+L +IT++G L F T L L++S
Sbjct: 131 GLKELAPLKSLTLLELGETQITEAGIKELAPF------------------TKLTRLDLSI 172
Query: 424 SRITSAGLRHLKPLKNLRSLTLESCKVT 451
+R+T AG++ L P L L L VT
Sbjct: 173 TRVTDAGVKGLAPFTKLTQLNLGGTLVT 200
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 79/137 (57%), Gaps = 6/137 (4%)
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDS 387
S++ + ++D L++LA L +L LNL ++TD GL L+ LT LTHL L ++TD+
Sbjct: 23 SVDFALWKVTDADLKELAPLKNLTQLNLCLTKVTDAGLKELSPLTKLTHLCLMQTKVTDA 82
Query: 388 GAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLR 441
G L NL +LE+ +TDAG LT L L + ++++T AGL+ L PLK+L
Sbjct: 83 GLKELAPLTNLTTLELGSTQVTDAGLKELAPLTNLTVLTLGSTQVTDAGLKELAPLKSLT 142
Query: 442 SLTLESCKVTANDIKRL 458
L L ++T IK L
Sbjct: 143 LLELGETQITEAGIKEL 159
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 80/154 (51%), Gaps = 6/154 (3%)
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
+V + L+ L+ L NL +NL T ++D L++L+ L+ L L L ++TD GL L
Sbjct: 30 KVTDADLKELAPLKNLTQLNLCLTKVTDAGLKELSPLTKLTHLCLMQTKVTDAGLKELAP 89
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLN------VSNS 424
LT LT L+L ++TD+G L NL L + +TDAGL L L + +
Sbjct: 90 LTNLTTLELGSTQVTDAGLKELAPLTNLTVLTLGSTQVTDAGLKELAPLKSLTLLELGET 149
Query: 425 RITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
+IT AG++ L P L L L +VT +K L
Sbjct: 150 QITEAGIKELAPFTKLTRLDLSITRVTDAGVKGL 183
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 9/174 (5%)
Query: 19 CLTEVSLEAFRDCA----LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGL 74
CLT+V+ ++ + L LCL Q V D + +A ++L +++L + VTD+GL
Sbjct: 51 CLTKVTDAGLKELSPLTKLTHLCLMQT-KVTDAGLKELAPL-TNLTTLELGSTQVTDAGL 108
Query: 75 IHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLV 134
L +NL L Q++D GL+ L L +LT L IT G+K A L
Sbjct: 109 KELAPLTNLTVLTLG-STQVTDAGLKELAPLKSLTLLELGETQ-ITEAGIKELAPFTKLT 166
Query: 135 KLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
+LDL G+ L KL LN+ +TD+ +K L+ L NL L +S
Sbjct: 167 RLDLSITRVTDAGVKGLAPFTKLTQLNL-GGTLVTDTCLKDLAPLKNLAFLSLS 219
>gi|325109499|ref|YP_004270567.1| hypothetical protein Plabr_2946 [Planctomyces brasiliensis DSM
5305]
gi|324969767|gb|ADY60545.1| leucine-rich repeat cysteine-containing subtype [Planctomyces
brasiliensis DSM 5305]
Length = 381
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 144/281 (51%), Gaps = 12/281 (4%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
++ ++ L+ L L+SL + S D + + +L L+L CPV+ A L L L
Sbjct: 86 VSPEALEALAKLPKLRSLLLRESNAGDDALIAVGKCSQLENLDLRECPVSNAGLAHLVGL 145
Query: 228 GSLFYLNLN----RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
L L L+ + D G E +K+ LKVL L F I+ + L LK LT+L L L
Sbjct: 146 EKLKALRLSGQSGATTVDDGGMESVAKLPQLKVLALDFLWISGDGLQQLKPLTDLRELYL 205
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSL 341
S +GDE L L+ L+ L +S +Q+ G++ +S L+ LE +++S + +S+ +
Sbjct: 206 ASTLVGDEDLKALSQFPELRKLRVSKLSQLSGQGIQEISQLSKLEELDVSEDSSLSNDDI 265
Query: 342 RKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
L+ L+ L LNL I+D G+ L LT LT L+L +++D+G + L+ K L+ L
Sbjct: 266 SSLSKLTKLTKLNLWRVPISDAGVEHLAPLTKLTWLNLDNTQLSDAGLSTLKEMKELKFL 325
Query: 402 EICGGGLTDAGLTGLVSLN------VSNSRITSAGLRHLKP 436
+ +++AGL L L V+ + + G+ L+P
Sbjct: 326 HLGSTQISNAGLPQLSELKSLDKLVVTRTAVNQEGVDKLQP 366
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 133/286 (46%), Gaps = 31/286 (10%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQ- 122
L S+ D LI + CS L++LD C +S+ GL HL GL L +L + T
Sbjct: 105 LRESNAGDDALIAVGKCSQLENLDLREC-PVSNAGLAHLVGLEKLKALRLSGQSGATTVD 163
Query: 123 --GMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
GM++ A L L L L+ GL LK L L L + + D D+K LS
Sbjct: 164 DGGMESVAKLPQLKVLALDFLWISGDGLQQLKPLTDLRELYLA-STLVGDEDLKALSQFP 222
Query: 181 NLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNL-EGCPVTAACLDSLSALGSLFYLNLNRC 238
L+ L++S S+++ GI + L KL L++ E ++ + SLS L L LNL R
Sbjct: 223 ELRKLRVSKLSQLSGQGIQEISQLSKLEELDVSEDSSLSNDDISSLSKLTKLTKLNLWRV 282
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
+SD G E HL LT L LNLD+ + D GL L
Sbjct: 283 PISDAGVE------------------------HLAPLTKLTWLNLDNTQLSDAGLSTLKE 318
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
+ LK L L TQ+ ++GL LS L +L+ + ++ T ++ + KL
Sbjct: 319 MKELKFLHLGSTQISNAGLPQLSELKSLDKLVVTRTAVNQEGVDKL 364
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 140/316 (44%), Gaps = 31/316 (9%)
Query: 84 QSLDFNFC-IQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT 142
Q ++ +F ++S LE L L L SL R +NA + A L LDL C
Sbjct: 75 QIIEVDFIGKEVSPEALEALAKLPKLRSLLLRESNA-GDDALIAVGKCSQLENLDLRECP 133
Query: 143 RIHGGLVNLKGLMKLESLNIKW---CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY 199
+ GL +L GL KL++L + + D M+ ++ L LK L + ++ G+
Sbjct: 134 VSNAGLAHLVGLEKLKALRLSGQSGATTVDDGGMESVAKLPQLKVLALDFLWISGDGLQQ 193
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR-CQLSDDGCEKFSKIGSLKVLN 258
LK L L L L V L +LS L L +++ QLS G ++ S++ L+ L+
Sbjct: 194 LKPLTDLRELYLASTLVGDEDLKALSQFPELRKLRVSKLSQLSGQGIQEISQLSKLEELD 253
Query: 259 LGFNE-ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGL 317
+ + ++++ + L LT L LNL I D +G+
Sbjct: 254 VSEDSSLSNDDISSLSKLTKLTKLNLWRVPISD------------------------AGV 289
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
HL+ LT L +NL T +SD L L + LK L+L + QI++ GL L+ L L L
Sbjct: 290 EHLAPLTKLTWLNLDNTQLSDAGLSTLKEMKELKFLHLGSTQISNAGLPQLSELKSLDKL 349
Query: 378 DLFGARITDSGAAYLR 393
+ + G L+
Sbjct: 350 VVTRTAVNQEGVDKLQ 365
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 12/260 (4%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDF---NFCIQISDGGLEHLRGLSNLTSLSF 113
S L ++DL V+++GL HL L++L + + DGG+E + L L L+
Sbjct: 122 SQLENLDLRECPVSNAGLAHLVGLEKLKALRLSGQSGATTVDDGGMESVAKLPQLKVLAL 181
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
I+ G++ L +L +L L L L +L L + + ++ +
Sbjct: 182 DF-LWISGDGLQQLKPLTDLRELYLASTLVGDEDLKALSQFPELRKLRVSKLSQLSGQGI 240
Query: 174 KPLSGLTNLKSLQISC-SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
+ +S L+ L+ L +S S +++ I+ L L KLT LNL P++ A ++ L+ L L +
Sbjct: 241 QEISQLSKLEELDVSEDSSLSNDDISSLSKLTKLTKLNLWRVPISDAGVEHLAPLTKLTW 300
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
LNL+ QLSD G ++ LK L+LG +I++ L L L +L+ L + + EG
Sbjct: 301 LNLDNTQLSDAGLSTLKEMKELKFLHLGSTQISNAGLPQLSELKSLDKLVVTRTAVNQEG 360
Query: 293 LVNLTGLCNLKCLELSDTQV 312
+ L EL DT++
Sbjct: 361 VDKLQP-------ELPDTEI 373
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 105/240 (43%), Gaps = 38/240 (15%)
Query: 250 KIGSLKVLNLGF--NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL 307
K G +++ + F E++ E L L L L SL L GD+ L+ + L+ L+L
Sbjct: 70 KNGDDQIIEVDFIGKEVSPEALEALAKLPKLRSLLLRESNAGDDALIAVGKCSQLENLDL 129
Query: 308 SDTQVGSSGLRHLSGLTNLESINLS----FTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
+ V ++GL HL GL L+++ LS T + DG + +A L LK L LD I+
Sbjct: 130 RECPVSNAGLAHLVGLEKLKALRLSGQSGATTVDDGGMESVAKLPQLKVLALDFLWISGD 189
Query: 364 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL------EICGGGLTD------- 410
GL L LT L L L + D L F LR L ++ G G+ +
Sbjct: 190 GLQQLKPLTDLRELYLASTLVGDEDLKALSQFPELRKLRVSKLSQLSGQGIQEISQLSKL 249
Query: 411 -------------------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
+ LT L LN+ I+ AG+ HL PL L L L++ +++
Sbjct: 250 EELDVSEDSSLSNDDISSLSKLTKLTKLNLWRVPISDAGVEHLAPLTKLTWLNLDNTQLS 309
>gi|168700559|ref|ZP_02732836.1| hypothetical protein GobsU_13597 [Gemmata obscuriglobus UQM 2246]
Length = 446
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 148/342 (43%), Gaps = 17/342 (4%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKL 157
L L+GL +T ++F ++ +T + AG +L L C R+ G G L L +L
Sbjct: 95 LATLKGLKCVTEVTFA-SDRLTDTDLACIAGFEHLRSFGLRDCGRVTGAGFGVLAQLPRL 153
Query: 158 ESLNIKWCN---CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC 214
KW + +TD L + L+++ + +K TD+G+ L L L +N+
Sbjct: 154 -----KWVSLVGPVTDEAGPHLGRIKTLETVVLYRTKFTDAGLKELAALPALGSVNVTAT 208
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG 274
PVT + L ++ + + G E S + L L L +TD L HL
Sbjct: 209 PVTGTAF-AEPGWSRLREIDATQTAFNAAGLEAVSALPVLGTLTLDATAVTDSGLKHLAR 267
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
L+ L+L + D G+ L G+ L+ L L T V + L +NL+ T
Sbjct: 268 ARALQELSLADTPVADTGVAALAGVQTLRVLNLERTGVTGAAFATFPVPAELRKLNLAET 327
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
+D S LA L +L +L+L +TD GLA L L L +LDL G + D A
Sbjct: 328 RFTDASGSHLARLPALTNLSLSGCDVTDAGLARLADLKKLANLDLTGTKAGDGAAEVAGT 387
Query: 395 FKNLRSLEICGGGLTDAGLTG------LVSLNVSNSRITSAG 430
L + G LTDAGL L L V S++T G
Sbjct: 388 LAELEVVSFRGTQLTDAGLKAAAHGARLRFLYVRGSKVTKRG 429
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 137/347 (39%), Gaps = 62/347 (17%)
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
+T G A G + + +ER + L LKGL + + + +TD+D+ ++G
Sbjct: 70 VTVHGPGADGGCV----VRVERTADLAPALATLKGLKCVTEVTFA-SDRLTDTDLACIAG 124
Query: 179 LTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
+L+S + C +VT +G L L +L ++L G
Sbjct: 125 FEHLRSFGLRDCGRVTGAGFGVLAQLPRLKWVSLVG------------------------ 160
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
+TDE HL + LE++ L D GL L
Sbjct: 161 -------------------------PVTDEAGPHLGRIKTLETVVLYRTKFTDAGLKELA 195
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA 357
L L + ++ T V + G + L I+ + T + L ++ L L +L LDA
Sbjct: 196 ALPALGSVNVTATPVTGTAFAE-PGWSRLREIDATQTAFNAAGLEAVSALPVLGTLTLDA 254
Query: 358 RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG-- 415
+TD+GL L L L L + D+G A L + LR L + G+T A
Sbjct: 255 TAVTDSGLKHLARARALQELSLADTPVADTGVAALAGVQTLRVLNLERTGVTGAAFATFP 314
Query: 416 ----LVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
L LN++ +R T A HL L L +L+L C VT + RL
Sbjct: 315 VPAELRKLNLAETRFTDASGSHLARLPALTNLSLSGCDVTDAGLARL 361
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 80/207 (38%), Gaps = 27/207 (13%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
L + VTDSGL HL LQ L + + G
Sbjct: 252 LDATAVTDSGLKHLARARALQELSLA--------------------------DTPVADTG 285
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+ A AG+ L L+LER +L LN+ TD+ L+ L L
Sbjct: 286 VAALAGVQTLRVLNLERTGVTGAAFATFPVPAELRKLNLAETR-FTDASGSHLARLPALT 344
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
+L +S VTD+G+A L L+KL L+L G + L L ++ QL+D
Sbjct: 345 NLSLSGCDVTDAGLARLADLKKLANLDLTGTKAGDGAAEVAGTLAELEVVSFRGTQLTDA 404
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLV 270
G + + L+ L + +++T V
Sbjct: 405 GLKAAAHGARLRFLYVRGSKVTKRGAV 431
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+L ++ LSG DVTD+GL L D L +LD + DG E L+ L +SF R
Sbjct: 341 PALTNLSLSGCDVTDAGLARLADLKKLANLDLT-GTKAGDGAAEVAGTLAELEVVSF-RG 398
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITD 170
+T G+KA A L R + G V +G + + + C + +
Sbjct: 399 TQLTDAGLKAAAHGARL------RFLYVRGSKVTKRGAVDAGKVVREGCRIVAE 446
>gi|283777859|ref|YP_003368614.1| serine/threonine protein kinase [Pirellula staleyi DSM 6068]
gi|283436312|gb|ADB14754.1| serine/threonine protein kinase [Pirellula staleyi DSM 6068]
Length = 1487
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 210/453 (46%), Gaps = 65/453 (14%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNL-------T 109
S L +DLS + +TD GL L S L+ L + +SD GLE L +L T
Sbjct: 743 SQLAELDLSSTKITDQGLTRLLALSKLERLYLSDN-SLSDNGLEQLAMAKSLRLLVASGT 801
Query: 110 SLSFRRNNAITAQGMKAF-----AGLINLVKLDL-ERCTR-----IHGGLVNLK------ 152
LS R + +TA + A + V L L ER R + G +V +
Sbjct: 802 MLSERGHGVLTAALPQTEITWDGADMQRQVALVLLERGARLSVADMRGNIVPVVARREDL 861
Query: 153 --GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
G +K+ ++ C I D D+KPL L +L+SL +S +K+T +G+A L GL L ++
Sbjct: 862 PIGRLKVLKVDFAGCRTIGDDDLKPLVALADLESLALSGTKITPAGLANLHGLASLKSID 921
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN-------- 262
L P+T A +++L+A L C++ + E K+ + VL++G
Sbjct: 922 LGTLPLTTASVETLAA-------ALPDCKI--ERREPADKLVARWVLSVGGKCTITSDES 972
Query: 263 ----EITDECLVHLKGLTNLESLNLDSCGIG-DEGLVNLTGLCNLKCLELSDTQVGSSGL 317
E+T V + ++E +NL C IG D L ++ L NLK L L + + + L
Sbjct: 973 ASQVELTSATTVLPEAAIHVEKINLTDCKIGPDAPLASIAELANLKSLLLVGSDITDAQL 1032
Query: 318 RHLSGLTNLESINLSFTGISDGSLRK-LAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
++GL +L ++LS T ++ ++ LA L L+ L L ++ L A+T+L L+H
Sbjct: 1033 TSIAGLKSLSELSLSDTAVTAPAVNGLLAQLPQLQRLYLSGTKVDRGVLVAVTNLPKLSH 1092
Query: 377 LDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAG 430
L L G + S + L+ L L++ GL+D GL+ L L V + +T AG
Sbjct: 1093 LSLAGIEVAPSDLSLLKKCPQLEWLDLSSTGLSDEASQQLVGLSSLRELAVPKNPLTDAG 1152
Query: 431 LRHLKPLKNLRSLTLESCKVTAN--DIKRLQSR 461
L + +C V + D +RL +R
Sbjct: 1153 QEEL-------IAAMPNCHVVGDPLDPQRLAAR 1178
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 176/366 (48%), Gaps = 29/366 (7%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
L+G +V S L LK C L+ LD + +SD + L GLS+L L+ +N A
Sbjct: 1095 LAGIEVAPSDLSLLKKCPQLEWLDLS-STGLSDEASQQLVGLSSLRELAVPKNPLTDAGQ 1153
Query: 124 MKAFAGLIN--LVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP------ 175
+ A + N +V L+ ++ +G ++L++ +T P
Sbjct: 1154 EELIAAMPNCHVVGDPLDPQRLAARWILEKRGTVELDT------GAVTSPKELPRDKCHV 1207
Query: 176 ----LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
L+ L NLK+ ++ I + G +L L L +T A L ++ L L
Sbjct: 1208 LAIDLAELANLKAAEV---------IQVIAGCSELESLRLSDTAITDADLAAIGKLKLLK 1258
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
L L ++DDG K +++ L+VL++ IT L + + ++L+ LNL + + D
Sbjct: 1259 KLYLANLAITDDGLAKLAELELLEVLDVSGGRITGAGLANFRSASSLQELNLSNTMLTDP 1318
Query: 292 GLVNLTGLCNLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
L + + +L L++S + V +GL+ L+GLT L S+ L T ++D + LA + L
Sbjct: 1319 NLAAIAPMTSLISLDMSACRGVSDAGLKKLAGLTQLRSLGLRGTKLTDAAAESLASYAKL 1378
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
+ L+LD+ I D+G+ L SLT L L L +TD G A L K+LRS+ + +T+
Sbjct: 1379 EQLDLDSTSIGDSGVEKLLSLTSLRRLVLAKTSVTDGGVASLAKLKDLRSVSLVRTSVTE 1438
Query: 411 AGLTGL 416
A T L
Sbjct: 1439 AACTEL 1444
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 149/318 (46%), Gaps = 54/318 (16%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L+ L L+ L +S +KV + + L KL+ L+L G V + L L L +L+L
Sbjct: 1060 LAQLPQLQRLYLSGTKVDRGVLVAVTNLPKLSHLSLAGIEVAPSDLSLLKKCPQLEWLDL 1119
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITD---ECLV------HLKG------------ 274
+ LSD+ ++ + SL+ L + N +TD E L+ H+ G
Sbjct: 1120 SSTGLSDEASQQLVGLSSLRELAVPKNPLTDAGQEELIAAMPNCHVVGDPLDPQRLAARW 1179
Query: 275 --------------LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
+T+ + L D C + ++L L NLK E+ ++ +
Sbjct: 1180 ILEKRGTVELDTGAVTSPKELPRDKCHVL---AIDLAELANLKAAEV---------IQVI 1227
Query: 321 SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
+G + LES+ LS T I+D L + L LK L L ITD GLA L L L LD+
Sbjct: 1228 AGCSELESLRLSDTAITDADLAAIGKLKLLKKLYLANLAITDDGLAKLAELELLEVLDVS 1287
Query: 381 GARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSR-ITSAGLRH 433
G RIT +G A R+ +L+ L + LTD A +T L+SL++S R ++ AGL+
Sbjct: 1288 GGRITGAGLANFRSASSLQELNLSNTMLTDPNLAAIAPMTSLISLDMSACRGVSDAGLKK 1347
Query: 434 LKPLKNLRSLTLESCKVT 451
L L LRSL L K+T
Sbjct: 1348 LAGLTQLRSLGLRGTKLT 1365
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 164/391 (41%), Gaps = 59/391 (15%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
+L++D G VTDS L L+ L+ L I+D G+ L L +L LS R A
Sbjct: 673 ILAIDFEGRGVTDSDLASLELAPGLRQLSL-AATPITDTGIASLAKLKSLAKLSLART-A 730
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
IT +G+++ A L L +LDL GL L L KLE L + N ++D+ ++ L+
Sbjct: 731 ITNKGLESLARLSQLAELDLSSTKITDQGLTRLLALSKLERLYLS-DNSLSDNGLEQLAM 789
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+L+ L S + +++ G L T + +G + L G+ + R
Sbjct: 790 AKSLRLLVASGTMLSERGHGVLTAALPQTEITWDGADMQRQVALVLLERGARLSVADMRG 849
Query: 239 QLSDDGCEKFS-KIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNL 296
+ + IG LKVL + F C IGD+ L L
Sbjct: 850 NIVPVVARREDLPIGRLKVLKVDFA----------------------GCRTIGDDDLKPL 887
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
L +L+ L LS T++ +GL +L GL +L+SI+L ++ S+ LA ++L ++
Sbjct: 888 VALADLESLALSGTKITPAGLANLHGLASLKSIDLGTLPLTTASVETLA--AALPDCKIE 945
Query: 357 ARQITDT----------GLAALTSLTGLTHLDLFGARI--------------------TD 386
R+ D G +TS + ++L A D
Sbjct: 946 RREPADKLVARWVLSVGGKCTITSDESASQVELTSATTVLPEAAIHVEKINLTDCKIGPD 1005
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLV 417
+ A + NL+SL + G +TDA LT +
Sbjct: 1006 APLASIAELANLKSLLLVGSDITDAQLTSIA 1036
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 119/281 (42%), Gaps = 56/281 (19%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
+TDSD+ L L+ L ++ + +TD+GIA SL+ L
Sbjct: 683 VTDSDLASLELAPGLRQLSLAATPITDTGIA------------------------SLAKL 718
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
SL L+L R +++ G E +++ L L+L +ITD+ L L L+ LE L L
Sbjct: 719 KSLAKLSLARTAITNKGLESLARLSQLAELDLSSTKITDQGLTRLLALSKLERLYLSDNS 778
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG------------ 335
+ D GL L +L+ L S T + G H L +++ G
Sbjct: 779 LSDNGLEQLAMAKSLRLLVASGTMLSERG--HGVLTAALPQTEITWDGADMQRQVALVLL 836
Query: 336 -------ISD--GSL------RKLAGLSSLKSLNLD---ARQITDTGLAALTSLTGLTHL 377
++D G++ R+ + LK L +D R I D L L +L L L
Sbjct: 837 ERGARLSVADMRGNIVPVVARREDLPIGRLKVLKVDFAGCRTIGDDDLKPLVALADLESL 896
Query: 378 DLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS 418
L G +IT +G A L +L+S+++ LT A + L +
Sbjct: 897 ALSGTKITPAGLANLHGLASLKSIDLGTLPLTTASVETLAA 937
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 123/275 (44%), Gaps = 27/275 (9%)
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
++ EG VT + L SL L L+L ++D G +K+ SL L+L IT++
Sbjct: 676 IDFEGRGVTDSDLASLELAPGLRQLSLAATPITDTGIASLAKLKSLAKLSLARTAITNKG 735
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
L L L+ L L+L S I D+GL L L L+ L LSD + +GL L+ +L
Sbjct: 736 LESLARLSQLAELDLSSTKITDQGLTRLLALSKLERLYLSDNSLSDNGLEQLAMAKSLRL 795
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDA----RQITDTGLAALTSLTGLTHLDLFG--- 381
+ S T +S+ L + D RQ+ L L L+ D+ G
Sbjct: 796 LVASGTMLSERGHGVLTAALPQTEITWDGADMQRQV---ALVLLERGARLSVADMRGNIV 852
Query: 382 ---ARITDSGAAYLR----NFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAG 430
AR D L+ +F R++ G D L L SL +S ++IT AG
Sbjct: 853 PVVARREDLPIGRLKVLKVDFAGCRTI-----GDDDLKPLVALADLESLALSGTKITPAG 907
Query: 431 LRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 465
L +L L +L+S+ L + +T ++ L + LP+
Sbjct: 908 LANLHGLASLKSIDLGTLPLTTASVETLAAA-LPD 941
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
+++ + G+ D L +L L+ L L+ T + +G+ L+ L +L ++L+ T I++
Sbjct: 675 AIDFEGRGVTDSDLASLELAPGLRQLSLAATPITDTGIASLAKLKSLAKLSLARTAITNK 734
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
L LA LS L L+L + +ITD GL L +L+ L L L ++D+G L K+LR
Sbjct: 735 GLESLARLSQLAELDLSSTKITDQGLTRLLALSKLERLYLSDNSLSDNGLEQLAMAKSLR 794
Query: 400 SLEICGGGLTDAGLTGLVSLNVSNSRITSAG 430
L G L++ G G+++ + + IT G
Sbjct: 795 LLVASGTMLSERG-HGVLTAALPQTEITWDG 824
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Query: 253 SLKVLNLGFNE--ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
SL++L + F +TD L L+ L L+L + I D G+ +L L +L L L+ T
Sbjct: 670 SLEILAIDFEGRGVTDSDLASLELAPGLRQLSLAATPITDTGIASLAKLKSLAKLSLART 729
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
+ + GL L+ L+ L ++LS T I+D L +L LS L+ L L ++D GL L
Sbjct: 730 AITNKGLESLARLSQLAELDLSSTKITDQGLTRLLALSKLERLYLSDNSLSDNGLEQLAM 789
Query: 371 LTGLTHLDLFGARITDSGAAYL 392
L L G +++ G L
Sbjct: 790 AKSLRLLVASGTMLSERGHGVL 811
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 3/159 (1%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIH-GGLVNL 151
+I+ GL + R S+L L+ N +T + A A + +L+ LD+ C + GL L
Sbjct: 1290 RITGAGLANFRSASSLQELNLS-NTMLTDPNLAAIAPMTSLISLDMSACRGVSDAGLKKL 1348
Query: 152 KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
GL +L SL ++ +TD+ + L+ L+ L + + + DSG+ L L L L L
Sbjct: 1349 AGLTQLRSLGLRGTK-LTDAAAESLASYAKLEQLDLDSTSIGDSGVEKLLSLTSLRRLVL 1407
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
VT + SL+ L L ++L R +++ C + K
Sbjct: 1408 AKTSVTDGGVASLAKLKDLRSVSLVRTSVTEAACTELEK 1446
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%)
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
IT G+ F +L +L+L L + + L SL++ C ++D+ +K L+G
Sbjct: 1291 ITGAGLANFRSASSLQELNLSNTMLTDPNLAAIAPMTSLISLDMSACRGVSDAGLKKLAG 1350
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
LT L+SL + +K+TD+ L KL L+L+ + + ++ L +L SL L L +
Sbjct: 1351 LTQLRSLGLRGTKLTDAAAESLASYAKLEQLDLDSTSIGDSGVEKLLSLTSLRRLVLAKT 1410
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
++D G +K+ L+ ++L +T+ L+
Sbjct: 1411 SVTDGGVASLAKLKDLRSVSLVRTSVTEAACTELE 1445
>gi|406834160|ref|ZP_11093754.1| ribonuclease inhibitor [Schlesneria paludicola DSM 18645]
Length = 390
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 147/311 (47%), Gaps = 30/311 (9%)
Query: 36 LCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQIS 95
+ L Q P +D + Q L+ + L + +TD+GL +L LQ LD + +IS
Sbjct: 95 ITLDQSPIGDDDL--AVLKQTPQLVGLSLRATKITDAGLKYLSSVPRLQKLDLSRT-KIS 151
Query: 96 DGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLM 155
D GLEHL+ L+NL +L + + G L GL
Sbjct: 152 DAGLEHLQ-------------------------TLVNLCELTIAETSVTDAGTAKLAGLK 186
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 215
L LN+ N +TD+ +K +S + NL +L + +TD G+A LK Q LT L+L+G P
Sbjct: 187 NLRVLNVSKTN-VTDTSLKVISEIPNLNTLILDGCNLTDVGLASLKDCQSLTFLSLDGIP 245
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
+T + L L + L YL L + + + +LK+L+L + D + + +
Sbjct: 246 LTGSFLKELKGI-PLEYLTLANSKCDGTTFKDVGTLKNLKMLSLENCPVEDASIASIAAI 304
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 335
+LE+L+LD+ I ++ +V L + +L L ++ T + + LR L NL+ + T
Sbjct: 305 ASLETLSLDNTKITEQAIVELKDMPSLVSLSINSTPISAEELRQLKATPNLKLVKAHNTK 364
Query: 336 ISDGSLRKLAG 346
++ G + LA
Sbjct: 365 VTRGDVDALAA 375
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 176/375 (46%), Gaps = 42/375 (11%)
Query: 87 DFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG 146
D++ I++ D + SL R + A+ A + L ++V D + + +G
Sbjct: 44 DYSPVIEVKD----------RVNSLGGRAHMAVAAPAV-----LQSIVGKDWDGWDQFYG 88
Query: 147 GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKL 206
G ++++ + + + I D D+ L L L + +K+TD+G+ YL + +L
Sbjct: 89 G-------VEVDQITLDQ-SPIGDDDLAVLKQTPQLVGLSLRATKITDAGLKYLSSVPRL 140
Query: 207 TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
L+L ++ A L+ L L +L L + ++D G K + + +L+VLN+ +TD
Sbjct: 141 QKLDLSRTKISDAGLEHLQTLVNLCELTIAETSVTDAGTAKLAGLKNLRVLNVSKTNVTD 200
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
L + + NL +L LD C + D GL +L +L L L + S L+ L G+ L
Sbjct: 201 TSLKVISEIPNLNTLILDGCNLTDVGLASLKDCQSLTFLSLDGIPLTGSFLKELKGIP-L 259
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
E + L+ + + + + L +LK L+L+ + D +A++ ++ L L L +IT+
Sbjct: 260 EYLTLANSKCDGTTFKDVGTLKNLKMLSLENCPVEDASIASIAAIASLETLSLDNTKITE 319
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
L++ + LVSL+++++ I++ LR LK NL+ +
Sbjct: 320 QAIVELKD------------------MPSLVSLSINSTPISAEELRQLKATPNLKLVKAH 361
Query: 447 SCKVTANDIKRLQSR 461
+ KVT D+ L +
Sbjct: 362 NTKVTRGDVDALAAE 376
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 130/263 (49%), Gaps = 31/263 (11%)
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
+ L++ + DD + L L+L +ITD L +L + L+ L+L I D G
Sbjct: 95 ITLDQSPIGDDDLAVLKQTPQLVGLSLRATKITDAGLKYLSSVPRLQKLDLSRTKISDAG 154
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
L +L L NL L +++T V +G L+GL NL +N+S T ++D SL+ ++ + +L +
Sbjct: 155 LEHLQTLVNLCELTIAETSVTDAGTAKLAGLKNLRVLNVSKTNVTDTSLKVISEIPNLNT 214
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR------------------- 393
L LD +TD GLA+L LT L L G +T S L+
Sbjct: 215 LILDGCNLTDVGLASLKDCQSLTFLSLDGIPLTGSFLKELKGIPLEYLTLANSKCDGTTF 274
Query: 394 ----NFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSL 443
KNL+ L + + D A + L +L++ N++IT + LK + +L SL
Sbjct: 275 KDVGTLKNLKMLSLENCPVEDASIASIAAIASLETLSLDNTKITEQAIVELKDMPSLVSL 334
Query: 444 TLESCKVTANDIKRLQSRDLPNL 466
++ S ++A ++++L++ PNL
Sbjct: 335 SINSTPISAEELRQLKAT--PNL 355
>gi|242089917|ref|XP_002440791.1| hypothetical protein SORBIDRAFT_09g006650 [Sorghum bicolor]
gi|241946076|gb|EES19221.1| hypothetical protein SORBIDRAFT_09g006650 [Sorghum bicolor]
Length = 608
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 137/539 (25%), Positives = 229/539 (42%), Gaps = 101/539 (18%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLS 61
LP ++ +F L R L LE F +++++ L + V+ +W+ + S +
Sbjct: 44 LPAPLADALFRRLAARRLLFPSLLEVFSR-SVEEVDLSGFLSVDAEWLAYLGSFRFLRVL 102
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
++ + + L + L+ LD + C +ISD G++H+ + +L L +T
Sbjct: 103 TLADCKNIDNDAVWSLSGMNTLKDLDLSRCKKISDAGIKHIVTIESLEKLHLSETE-LTN 161
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
G+ + L NL LDL GG++ +TD ++ L LT
Sbjct: 162 NGVMLISSLTNLSFLDL-------GGIL------------------MTDKSLQSLQVLTR 196
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLE-------GCPVTAACLD------------ 222
L+ L I S+ T+ G + LK +L LNL P T CL+
Sbjct: 197 LEHLDIWGSETTNEGASTLKSFARLIFLNLALTRVNHLSIPPTTRCLNMSNCEIHSICDE 256
Query: 223 -------------SLSALG------------SLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
S + G SL +L+L+ C+LS+ K+ +L+ L
Sbjct: 257 DSEVPVPLENFIVSAATFGNIDKVFSSIQASSLTHLDLSSCKLSN--LSFLEKMKNLEHL 314
Query: 258 NLGFNEITDECLVHLKGL-TNLESLNLDSCGIGDEGLVNLTG-LCNLKCLELSDTQVGSS 315
+L +N ITD + H+ L TNL+ L+L + GI + L L G + NL L L++T++ S
Sbjct: 315 DLSYNIITDGAIEHIAKLGTNLQYLSLKNTGITSQALCILAGTVPNLTSLSLANTKIDDS 374
Query: 316 GLRHLSGLTNLESINLSFTGISDGSLRK----LAG---------LSSLKSLNLDARQITD 362
L ++ + L +I+LS T I +L +AG L L+SLNL+ ++
Sbjct: 375 ALAYIGMIPLLRTIDLSQTSIKGCALENKFYLMAGFTHMSAFEHLKYLESLNLEDTPLSA 434
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL------TGL 416
+ L SL L +L L ++D L NL L CG L+ +GL T L
Sbjct: 435 EVIPPLASLAALKYLYLKSDFLSDPALHALSAASNLIHLGFCGNILSSSGLLQFVPPTTL 494
Query: 417 VSLNVSNSRITS----AGLRHLKPLKNLRSLTLESCK---VTANDIKRLQSRDLPNLVS 468
L++S I + + R P LR +E + V + ++ + R P++ S
Sbjct: 495 CVLDLSGCWILTGEAISTFRKRHPTIELRHELMEEVQANFVGGSQFRKPRRRQSPHVKS 553
>gi|290980468|ref|XP_002672954.1| predicted protein [Naegleria gruberi]
gi|284086534|gb|EFC40210.1| predicted protein [Naegleria gruberi]
Length = 349
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 119/230 (51%)
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
L ++ + L LN+ ++ +G + S++ L LN+ +N I DE ++ + L S
Sbjct: 96 LKFVTEMKQLTSLNIRGNRIGVEGAKYISEMKQLTSLNISYNVIGDEGAKYISEMKQLIS 155
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
LN+ IGDEG ++ + L L++S +G G +++SG+ L S+N+ +T I
Sbjct: 156 LNIRENEIGDEGAKYISEMKQLTSLDISYNIIGDEGAKYISGMKQLTSLNIYYTLIGIEG 215
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRS 400
+ ++ + L SLN+ +I G+ ++ + LT L++ R D GA ++ K L S
Sbjct: 216 AKFISEMKQLTSLNISENEIGIEGVKYISEMKQLTSLNISYNRTGDEGAKFISEMKQLTS 275
Query: 401 LEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
L ICG + + L SLN+ +RI G +++ +K L SL + ++
Sbjct: 276 LNICGKVKFISEMKQLTSLNIRGNRIGVEGAKYISEMKQLTSLNIRGNRI 325
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 144/305 (47%), Gaps = 16/305 (5%)
Query: 89 NFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF--AGLINLVKLDLERCTRIHG 146
N C IS ++ S L + F+ N IT + ++ F + +N + +D++ T +
Sbjct: 36 NNCTLISKQFFNVIKERSKLV-IQFKNN--ITEKRVELFMKSQFMNSI-VDVKFSTNLLE 91
Query: 147 GLVNLK---GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGL 203
+ LK + +L SLNI+ N I K +S + L SL IS + + D G Y+ +
Sbjct: 92 AIEQLKFVTEMKQLTSLNIR-GNRIGVEGAKYISEMKQLTSLNISYNVIGDEGAKYISEM 150
Query: 204 QKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNE 263
++L LN+ + +S + L L+++ + D+G + S + L LN+ +
Sbjct: 151 KQLISLNIRENEIGDEGAKYISEMKQLTSLDISYNIIGDEGAKYISGMKQLTSLNIYYTL 210
Query: 264 ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL 323
I E + + L SLN+ IG EG+ ++ + L L +S + G G + +S +
Sbjct: 211 IGIEGAKFISEMKQLTSLNISENEIGIEGVKYISEMKQLTSLNISYNRTGDEGAKFISEM 270
Query: 324 TNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGAR 383
L S+N+ G ++ ++ + L SLN+ +I G ++ + LT L++ G R
Sbjct: 271 KQLTSLNIC------GKVKFISEMKQLTSLNIRGNRIGVEGAKYISEMKQLTSLNIRGNR 324
Query: 384 ITDSG 388
I D G
Sbjct: 325 IGDQG 329
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 14/195 (7%)
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
E L +T + L L + ++G G +++S + L S+N+S+ I D + ++ + L
Sbjct: 94 EQLKFVTEMKQLTSLNIRGNRIGVEGAKYISEMKQLTSLNISYNVIGDEGAKYISEMKQL 153
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI------C 404
SLN+ +I D G ++ + LT LD+ I D GA Y+ K L SL I
Sbjct: 154 ISLNIRENEIGDEGAKYISEMKQLTSLDISYNIIGDEGAKYISGMKQLTSLNIYYTLIGI 213
Query: 405 GGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL-------ESCKVTANDIKR 457
G + + L SLN+S + I G++++ +K L SL + E K + ++K+
Sbjct: 214 EGAKFISEMKQLTSLNISENEIGIEGVKYISEMKQLTSLNISYNRTGDEGAKFIS-EMKQ 272
Query: 458 LQSRDLPNLVSFRPE 472
L S ++ V F E
Sbjct: 273 LTSLNICGKVKFISE 287
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 20/243 (8%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
L+ + + LTSL+ R N I +G K + + L L++ G + + +L
Sbjct: 96 LKFVTEMKQLTSLNIR-GNRIGVEGAKYISEMKQLTSLNISYNVIGDEGAKYISEMKQLI 154
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
SLNI+ N I D K +S + L SL IS + + D G Y+ G+++LT LN+ +
Sbjct: 155 SLNIR-ENEIGDEGAKYISEMKQLTSLDISYNIIGDEGAKYISGMKQLTSLNIYYTLIGI 213
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE---CLVHLKGL 275
+S + L LN++ ++ +G + S++ L LN+ +N DE + +K L
Sbjct: 214 EGAKFISEMKQLTSLNISENEIGIEGVKYISEMKQLTSLNISYNRTGDEGAKFISEMKQL 273
Query: 276 TNLE---------------SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
T+L SLN+ IG EG ++ + L L + ++G GL H
Sbjct: 274 TSLNICGKVKFISEMKQLTSLNIRGNRIGVEGAKYISEMKQLTSLNIRGNRIGDQGLNHE 333
Query: 321 SGL 323
+ L
Sbjct: 334 NSL 336
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 113/263 (42%), Gaps = 49/263 (18%)
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
+K ++ + L SL I +++ G Y+ +++LT LN+ + +S + L
Sbjct: 94 EQLKFVTEMKQLTSLNIRGNRIGVEGAKYISEMKQLTSLNISYNVIGDEGAKYISEMKQL 153
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
LN+ ++ D+G + S++ L L++ +N I DE ++ G+ L SLN+ IG
Sbjct: 154 ISLNIRENEIGDEGAKYISEMKQLTSLDISYNIIGDEGAKYISGMKQLTSLNIYYTLIGI 213
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD------------ 338
EG ++ + L L +S+ ++G G++++S + L S+N+S+ D
Sbjct: 214 EGAKFISEMKQLTSLNISENEIGIEGVKYISEMKQLTSLNISYNRTGDEGAKFISEMKQL 273
Query: 339 ------------GSLRKLAGLS------------------SLKSLNLDARQITDTGLAAL 368
+++L L+ L SLN+ +I D GL
Sbjct: 274 TSLNICGKVKFISEMKQLTSLNIRGNRIGVEGAKYISEMKQLTSLNIRGNRIGDQGLNHE 333
Query: 369 TSLTGLTHLDLFGARITDSGAAY 391
SL L+GA + +Y
Sbjct: 334 NSL-------LWGANKFNKSESY 349
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 267 ECLVHLKGLTNLE---SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL 323
E + LK +T ++ SLN+ IG EG ++ + L L +S +G G +++S +
Sbjct: 91 EAIEQLKFVTEMKQLTSLNIRGNRIGVEGAKYISEMKQLTSLNISYNVIGDEGAKYISEM 150
Query: 324 TNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGAR 383
L S+N+ I D + ++ + L SL++ I D G ++ + LT L+++
Sbjct: 151 KQLISLNIRENEIGDEGAKYISEMKQLTSLDISYNIIGDEGAKYISGMKQLTSLNIYYTL 210
Query: 384 ITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPL 437
I GA ++ K L SL I + G + L SLN+S +R G + + +
Sbjct: 211 IGIEGAKFISEMKQLTSLNISENEIGIEGVKYISEMKQLTSLNISYNRTGDEGAKFISEM 270
Query: 438 KNLRSLTL 445
K L SL +
Sbjct: 271 KQLTSLNI 278
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 9/191 (4%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L+S+++ +++ D G ++ + L SLD ++ I I D G +++ G+ LTSL+
Sbjct: 148 SEMKQLISLNIRENEIGDEGAKYISEMKQLTSLDISYNI-IGDEGAKYISGMKQLTSLNI 206
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
I +G K + + L L++ G+ + + +L SLNI + N D
Sbjct: 207 YY-TLIGIEGAKFISEMKQLTSLNISENEIGIEGVKYISEMKQLTSLNISY-NRTGDEGA 264
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K +S + L SL I C KV ++ +++LT LN+ G + +S + L L
Sbjct: 265 KFISEMKQLTSLNI-CGKV-----KFISEMKQLTSLNIRGNRIGVEGAKYISEMKQLTSL 318
Query: 234 NLNRCQLSDDG 244
N+ ++ D G
Sbjct: 319 NIRGNRIGDQG 329
>gi|168704615|ref|ZP_02736892.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 294
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 117/227 (51%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
I D+D+K L+ +L L + ++V+D+G+ L + LT L L VT A L ++ L
Sbjct: 59 IADADLKELAAFKHLAVLSLYDTQVSDAGLKELTSSKGLTELLLSRTKVTDAGLKDVAKL 118
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
L L L+ ++D G + + L L L +ITD ++ L L +L LD
Sbjct: 119 THLEKLALDETAVTDAGIGELVPLKRLSELWLMGTKITDAAFKNVAKLKGLTTLRLDGAK 178
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
I GL + + L LS T + +GL+ ++ +L + LS I+DG L++LA L
Sbjct: 179 ITGVGLKQVAAIDGFHSLYLSGTDISEAGLKEIAAFKSLRILQLSECKITDGGLKELAAL 238
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
L +L+L+ Q+TD G+ +L SL L L L ++TD+G +RN
Sbjct: 239 DKLTTLHLEKTQVTDAGVKSLASLKKLKVLHLTSTQVTDAGVKTIRN 285
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 129/249 (51%), Gaps = 7/249 (2%)
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
GS+ L L +++D ++ + L VL+L +++D L L L L L
Sbjct: 47 GSVIELWLEGTKIADADLKELAAFKHLAVLSLYDTQVSDAGLKELTSSKGLTELLLSRTK 106
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
+ D GL ++ L +L+ L L +T V +G+ L L L + L T I+D + + +A L
Sbjct: 107 VTDAGLKDVAKLTHLEKLALDETAVTDAGIGELVPLKRLSELWLMGTKITDAAFKNVAKL 166
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE----- 402
L +L LD +IT GL + ++ G L L G I+++G + FK+LR L+
Sbjct: 167 KGLTTLRLDGAKITGVGLKQVAAIDGFHSLYLSGTDISEAGLKEIAAFKSLRILQLSECK 226
Query: 403 ICGGGLTD-AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSR 461
I GGL + A L L +L++ +++T AG++ L LK L+ L L S +VT +K +++
Sbjct: 227 ITDGGLKELAALDKLTTLHLEKTQVTDAGVKSLASLKKLKVLHLTSTQVTDAGVKTIRNA 286
Query: 462 DLPNLVSFR 470
LP + F+
Sbjct: 287 -LPKCLVFK 294
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 115/229 (50%)
Query: 185 LQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
L + +K+ D+ + L + L +L+L V+ A L L++ L L L+R +++D G
Sbjct: 52 LWLEGTKIADADLKELAAFKHLAVLSLYDTQVSDAGLKELTSSKGLTELLLSRTKVTDAG 111
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
+ +K+ L+ L L +TD + L L L L L I D N+ L L
Sbjct: 112 LKDVAKLTHLEKLALDETAVTDAGIGELVPLKRLSELWLMGTKITDAAFKNVAKLKGLTT 171
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 364
L L ++ GL+ ++ + S+ LS T IS+ L+++A SL+ L L +ITD G
Sbjct: 172 LRLDGAKITGVGLKQVAAIDGFHSLYLSGTDISEAGLKEIAAFKSLRILQLSECKITDGG 231
Query: 365 LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL 413
L L +L LT L L ++TD+G L + K L+ L + +TDAG+
Sbjct: 232 LKELAALDKLTTLHLEKTQVTDAGVKSLASLKKLKVLHLTSTQVTDAGV 280
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 121/261 (46%), Gaps = 27/261 (10%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
S++ + L G+ + D+ L L +L L + Q+SD GL+ L LT L R
Sbjct: 48 SVIELWLEGTKIADADLKELAAFKHLAVLSL-YDTQVSDAGLKELTSSKGLTELLLSRTK 106
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS 177
+T G+K A L +L KL L+ +TD+ + L
Sbjct: 107 -VTDAGLKDVAKLTHLEKLALDE-------------------------TAVTDAGIGELV 140
Query: 178 GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
L L L + +K+TD+ + L+ LT L L+G +T L ++A+ L L+
Sbjct: 141 PLKRLSELWLMGTKITDAAFKNVAKLKGLTTLRLDGAKITGVGLKQVAAIDGFHSLYLSG 200
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
+S+ G ++ + SL++L L +ITD L L L L +L+L+ + D G+ +L
Sbjct: 201 TDISEAGLKEIAAFKSLRILQLSECKITDGGLKELAALDKLTTLHLEKTQVTDAGVKSLA 260
Query: 298 GLCNLKCLELSDTQVGSSGLR 318
L LK L L+ TQV +G++
Sbjct: 261 SLKKLKVLHLTSTQVTDAGVK 281
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 6/233 (2%)
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
L LEG + A L L+A L L+L Q+SD G ++ + L L L ++TD
Sbjct: 52 LWLEGTKIADADLKELAAFKHLAVLSLYDTQVSDAGLKELTSSKGLTELLLSRTKVTDAG 111
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
L + LT+LE L LD + D G+ L L L L L T++ + ++++ L L +
Sbjct: 112 LKDVAKLTHLEKLALDETAVTDAGIGELVPLKRLSELWLMGTKITDAAFKNVAKLKGLTT 171
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG 388
+ L I+ L+++A + SL L I++ GL + + L L L +ITD G
Sbjct: 172 LRLDGAKITGVGLKQVAAIDGFHSLYLSGTDISEAGLKEIAAFKSLRILQLSECKITDGG 231
Query: 389 AAYLRNFKNLRSLEICGGGLTDAGLTGLVS------LNVSNSRITSAGLRHLK 435
L L +L + +TDAG+ L S L+++++++T AG++ ++
Sbjct: 232 LKELAALDKLTTLHLEKTQVTDAGVKSLASLKKLKVLHLTSTQVTDAGVKTIR 284
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
L G+ +TD+ ++ L +L + +I+ GL+ + + SL + I+ G
Sbjct: 150 LMGTKITDAAFKNVAKLKGLTTLRLDGA-KITGVGLKQVAAIDGFHSL-YLSGTDISEAG 207
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+K A +L L L C GGL L L KL +L+++ +TD+ +K L+ L LK
Sbjct: 208 LKEIAAFKSLRILQLSECKITDGGLKELAALDKLTTLHLEKTQ-VTDAGVKSLASLKKLK 266
Query: 184 SLQISCSKVTDSGIAYLK 201
L ++ ++VTD+G+ ++
Sbjct: 267 VLHLTSTQVTDAGVKTIR 284
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
S+ LSG+D++++GL + +L+ L + C +I+DGGL+ L L LT+L + +T
Sbjct: 195 SLYLSGTDISEAGLKEIAAFKSLRILQLSEC-KITDGGLKELAALDKLTTLHLEKTQ-VT 252
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
G+K+ A L L L L G+ ++
Sbjct: 253 DAGVKSLASLKKLKVLHLTSTQVTDAGVKTIR 284
>gi|329905907|ref|ZP_08274287.1| hypothetical protein IMCC9480_2692 [Oxalobacteraceae bacterium
IMCC9480]
gi|327547418|gb|EGF32242.1| hypothetical protein IMCC9480_2692 [Oxalobacteraceae bacterium
IMCC9480]
Length = 552
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 152/512 (29%), Positives = 223/512 (43%), Gaps = 125/512 (24%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
S +TD+GL L + L+ LD C I D GL HL +++LT L+ R+ IT G++
Sbjct: 47 SKLTDAGLASLAPLTALKQLDLGHCTGIGDTGLAHLGNMASLTQLNVRQCTNITDAGLEQ 106
Query: 127 FAGLINLVKLDLERCTRI-HGGLVNLKGL-----------------------MKLESLNI 162
A L L +L+L C RI G+ +LK L +L LN+
Sbjct: 107 LANLPRLARLNLAGCHRITAAGIAHLKKLPLTYLDLSGCSGISNAAIAHLKAHQLTELNL 166
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLK-------------------- 201
C D L+ + L++L +S C+ T+SG+ +L
Sbjct: 167 SDCTGFGDEGFAHLAEVP-LQTLDLSGCTGFTNSGLRFLNKSTLTRLSLRNCTQLDFGAT 225
Query: 202 ----GLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNR-CQLSDDGCEKFSKIGSLK 255
G Q L L+L GC + L +L L L +L+L R L+D G E +++ SL+
Sbjct: 226 FRLYGAQSLRHLDLAGCEGLDNTALTALQDL-PLEHLDLARNTFLNDTGLESLAEMTSLR 284
Query: 256 VLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQV 312
LNL G ++TD L HL L L+ L L++C D GL L+ L L+ LEL D +
Sbjct: 285 YLNLSGGADMTDAALAHLAELPALQHLILNNCRRTTDAGLAQLSHL-PLETLELVDCVAL 343
Query: 313 GSSGLRHLSG-LTNLESINLS-FTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAAL- 368
++ L L G L+ ++LS T +SD L LA +++L+ L+L R TD G AL
Sbjct: 344 TNTALARLPGAAATLQKLDLSGCTALSDAGLAHLADITTLRKLDLSWNRNFTDAGAVALR 403
Query: 369 --------------------TSLTG--------------------------LTHLDLFGA 382
T+L+G L DL
Sbjct: 404 ELPLGQLRLNGWIGLTDQGMTALSGMPLQSLGLIGCDNIDGSGLAQLNSRCLQKFDLSHC 463
Query: 383 R-ITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGLVSLNVS------NSRITSAGLRHL 434
R + D YLR L+ L++ G +TDAGL L L ++ NS +T GL++L
Sbjct: 464 RLLNDDAMIYLRRLP-LKELDLSWCGAITDAGLAHLTGLQLTRLDLTYNSGVTDEGLKNL 522
Query: 435 K--PLKNLRSLTLESCKVTAN-----DIKRLQ 459
PL+ LR L +VT N ++RLQ
Sbjct: 523 SGMPLQQLRVLGCH--QVTPNGFWAAGLERLQ 552
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 128/383 (33%), Positives = 192/383 (50%), Gaps = 34/383 (8%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIK 163
+ +LT+L+ N+ +T G+ + A L L +LDL CT I GL +L + L LN++
Sbjct: 35 IRHLTNLNLSNNSKLTDAGLASLAPLTALKQLDLGHCTGIGDTGLAHLGNMASLTQLNVR 94
Query: 164 WCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACL 221
C ITD+ ++ L+ L L L ++ C ++T +GIA+LK L LT L+L GC ++ A +
Sbjct: 95 QCTNITDAGLEQLANLPRLARLNLAGCHRITAAGIAHLKKL-PLTYLDLSGCSGISNAAI 153
Query: 222 DSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLE 279
L A L LNL+ C D+G +++ L+ L+L G T+ L L T L
Sbjct: 154 AHLKA-HQLTELNLSDCTGFGDEGFAHLAEV-PLQTLDLSGCTGFTNSGLRFLNKST-LT 210
Query: 280 SLNLDSCGIGDEGLV-NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF----- 333
L+L +C D G L G +L+ L+L+ G GL + + LT L+ + L
Sbjct: 211 RLSLRNCTQLDFGATFRLYGAQSLRHLDLA----GCEGLDN-TALTALQDLPLEHLDLAR 265
Query: 334 -TGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLTGLTHLDLFGA-RITDSGAA 390
T ++D L LA ++SL+ LNL +TD LA L L L HL L R TD+G A
Sbjct: 266 NTFLNDTGLESLAEMTSLRYLNLSGGADMTDAALAHLAELPALQHLILNNCRRTTDAGLA 325
Query: 391 YLRNFKNLRSLEICG-GGLTDAGLTGLV-------SLNVSN-SRITSAGLRHLKPLKNLR 441
L + L +LE+ LT+ L L L++S + ++ AGL HL + LR
Sbjct: 326 QLSHLP-LETLELVDCVALTNTALARLPGAAATLQKLDLSGCTALSDAGLAHLADITTLR 384
Query: 442 SLTLESCKVTANDIKRLQSRDLP 464
L L S D + R+LP
Sbjct: 385 KLDL-SWNRNFTDAGAVALRELP 406
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 101/223 (45%), Gaps = 42/223 (18%)
Query: 20 LTEVSLEAFR--DC-ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLI 75
L+ + LE DC AL + L + PG ++L +DLSG + ++D+GL
Sbjct: 327 LSHLPLETLELVDCVALTNTALARLPGA-----------AATLQKLDLSGCTALSDAGLA 375
Query: 76 HLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGL----- 130
HL D + L+ LD ++ +D G LR L L L +T QGM A +G+
Sbjct: 376 HLADITTLRKLDLSWNRNFTDAGAVALRELP-LGQLRLNGWIGLTDQGMTALSGMPLQSL 434
Query: 131 ---------------IN---LVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
+N L K DL C ++ + + L+ L++ WC ITD+
Sbjct: 435 GLIGCDNIDGSGLAQLNSRCLQKFDLSHCRLLNDDAMIYLRRLPLKELDLSWCGAITDAG 494
Query: 173 MKPLSGLTNLKSLQISC-SKVTDSGIAYLKGLQKLTLLNLEGC 214
+ L+GL L L ++ S VTD G+ L G+ L L + GC
Sbjct: 495 LAHLTGL-QLTRLDLTYNSGVTDEGLKNLSGM-PLQQLRVLGC 535
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 135/326 (41%), Gaps = 66/326 (20%)
Query: 56 GSSLLSVDLS-------------------------------------------------- 65
SL +DL+
Sbjct: 231 AQSLRHLDLAGCEGLDNTALTALQDLPLEHLDLARNTFLNDTGLESLAEMTSLRYLNLSG 290
Query: 66 GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMK 125
G+D+TD+ L HL + LQ L N C + +D GL L L L +L A+T +
Sbjct: 291 GADMTDAALAHLAELPALQHLILNNCRRTTDAGLAQLSHLP-LETLELVDCVALTNTALA 349
Query: 126 AFAG-LINLVKLDLERCTRIH-GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
G L KLDL CT + GL +L + L L++ W TD+ L L L
Sbjct: 350 RLPGAAATLQKLDLSGCTALSDAGLAHLADITTLRKLDLSWNRNFTDAGAVALRELP-LG 408
Query: 184 SLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQLS 241
L+++ +TD G+ L G+ L L L GC + + L L++ L +L+ C+L
Sbjct: 409 QLRLNGWIGLTDQGMTALSGM-PLQSLGLIGCDNIDGSGLAQLNS-RCLQKFDLSHCRLL 466
Query: 242 DDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLD-SCGIGDEGLVNLTGL 299
+D + + LK L+L + ITD L HL GL L L+L + G+ DEGL NL+G+
Sbjct: 467 NDDAMIYLRRLPLKELDLSWCGAITDAGLAHLTGL-QLTRLDLTYNSGVTDEGLKNLSGM 525
Query: 300 C-----NLKCLELSDTQVGSSGLRHL 320
L C +++ ++GL L
Sbjct: 526 PLQQLRVLGCHQVTPNGFWAAGLERL 551
>gi|46445682|ref|YP_007047.1| hypothetical protein pc0048 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399323|emb|CAF22772.1| hypothetical protein pc0048 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 531
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 123/225 (54%), Gaps = 28/225 (12%)
Query: 66 GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMK 125
+ +TD+ L+ LK+C NL++L C ++D GL L L+NL L+ + +T +G+
Sbjct: 306 NAHLTDAHLLALKNCKNLKALHLQACHNLTDDGLASLTSLTNLQYLNLSCCDKLTNKGLA 365
Query: 126 AFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
F LI L L+L C I GL +LK L+ L+ LN LSG
Sbjct: 366 HFKSLIALQYLNLSGCAFITDAGLAHLKPLVALQYLN--------------LSG------ 405
Query: 185 LQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQ-LSD 242
C+ +TD+G+A+LK L L LNL GC +T A L L+ L +L +L+L+ C L++
Sbjct: 406 ----CAFITDAGLAHLKPLVALQYLNLSGCAFITDAGLAHLTPLVTLKHLDLSWCNSLTN 461
Query: 243 DGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC 286
G E+ + + +L+ LNL G +T+ L HL LTNL+ LNL+ C
Sbjct: 462 AGLERLASLVALQHLNLSGCIYLTEAGLTHLTSLTNLQQLNLNHC 506
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 126/241 (52%), Gaps = 28/241 (11%)
Query: 255 KVLNLGFNEI-----------TDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNL 302
K+LN NEI TD L+ LK NL++L+L +C + D+GL +LT L NL
Sbjct: 289 KILNYFSNEIEKLNFSENAHLTDAHLLALKNCKNLKALHLQACHNLTDDGLASLTSLTNL 348
Query: 303 KCLELSD-TQVGSSGLRHLSGLTNLESINLS-FTGISDGSLRKLAGLSSLKSLNLDA-RQ 359
+ L LS ++ + GL H L L+ +NLS I+D L L L +L+ LNL
Sbjct: 349 QYLNLSCCDKLTNKGLAHFKSLIALQYLNLSGCAFITDAGLAHLKPLVALQYLNLSGCAF 408
Query: 360 ITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGLV 417
ITD GLA L L L +L+L G A ITD+G A+L L+ L++ LT+AGL L
Sbjct: 409 ITDAGLAHLKPLVALQYLNLSGCAFITDAGLAHLTPLVTLKHLDLSWCNSLTNAGLERLA 468
Query: 418 SL------NVSNS-RITSAGLRHLKPLKNLRSLTLESCKVTAN-DIKRLQSRDL---PNL 466
SL N+S +T AGL HL L NL+ L L C+ A+ K R L PNL
Sbjct: 469 SLVALQHLNLSGCIYLTEAGLTHLTSLTNLQQLNLNHCEHFADVRFKLTHFRTLLANPNL 528
Query: 467 V 467
+
Sbjct: 529 I 529
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 102/190 (53%), Gaps = 3/190 (1%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
++TD GL L +NLQ L+ + C ++++ GL H + L L L+ IT G+
Sbjct: 333 NLTDDGLASLTSLTNLQYLNLSCCDKLTNKGLAHFKSLIALQYLNLSGCAFITDAGLAHL 392
Query: 128 AGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
L+ L L+L C I GL +LK L+ L+ LN+ C ITD+ + L+ L LK L
Sbjct: 393 KPLVALQYLNLSGCAFITDAGLAHLKPLVALQYLNLSGCAFITDAGLAHLTPLVTLKHLD 452
Query: 187 IS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
+S C+ +T++G+ L L L LNL GC +T A L L++L +L LNLN C+ D
Sbjct: 453 LSWCNSLTNAGLERLASLVALQHLNLSGCIYLTEAGLTHLTSLTNLQQLNLNHCEHFADV 512
Query: 245 CEKFSKIGSL 254
K + +L
Sbjct: 513 RFKLTHFRTL 522
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Query: 58 SLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+L ++LSG + +TD+GL HLK LQ L+ + C I+D GL HL L L L
Sbjct: 397 ALQYLNLSGCAFITDAGLAHLKPLVALQYLNLSGCAFITDAGLAHLTPLVTLKHLDLSWC 456
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
N++T G++ A L+ L L+L C + GL +L L L+ LN+ C D K
Sbjct: 457 NSLTNAGLERLASLVALQHLNLSGCIYLTEAGLTHLTSLTNLQQLNLNHCEHFADVRFK- 515
Query: 176 LSGLTNLKSL 185
LT+ ++L
Sbjct: 516 ---LTHFRTL 522
>gi|290999671|ref|XP_002682403.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284096030|gb|EFC49659.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 403
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 145/300 (48%), Gaps = 6/300 (2%)
Query: 152 KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
+ L+ ++SL C + +K +S L L L I S + D G+ Y+ L++LT L++
Sbjct: 104 RKLILMKSLTKLIIRCDDEEGVKYISELKQLTKLTIYGSHIGDEGVRYISELKQLTYLSI 163
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH 271
++ L L L L + ++ ++G + S++ L L++ N+I E +
Sbjct: 164 PSNGISEYGAKHLRELKQLTTLIIFCNRVGNEGSKYISELKQLTTLSIDENDIGAEGAKY 223
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
L LT L L++ S +GDEG ++ + L L ++ ++G+ G + +S L L+++++
Sbjct: 224 LSELTQLTCLDISSNWLGDEGAKYVSKMKQLTTLHINSNRIGNEGSKFISSLNQLKNLDI 283
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
I D L L+ LKSL+L +I D G L+ L L +LD+ + D GA
Sbjct: 284 CKNDIGDEGLEYFGQLAQLKSLDLSYNRIGDEGAQYLSELKQLIYLDIKTNHLGDKGAMP 343
Query: 392 LRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
+ K L L I + + G L L L++ N+ IT G ++ +K L LT+
Sbjct: 344 IGELKKLIYLYINNNKIRNEGAKYISELKQLTKLDIRNNFITEEGTKYFTEMKQLIDLTI 403
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 144/299 (48%), Gaps = 4/299 (1%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW 164
+ +LT L R ++ +G+K + L L KL + G+ + L +L L+I
Sbjct: 109 MKSLTKLIIRCDDE---EGVKYISELKQLTKLTIYGSHIGDEGVRYISELKQLTYLSIP- 164
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
N I++ K L L L +L I C++V + G Y+ L++LT L+++ + A L
Sbjct: 165 SNGISEYGAKHLRELKQLTTLIIFCNRVGNEGSKYISELKQLTTLSIDENDIGAEGAKYL 224
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
S L L L+++ L D+G + SK+ L L++ N I +E + L L++L++
Sbjct: 225 SELTQLTCLDISSNWLGDEGAKYVSKMKQLTTLHINSNRIGNEGSKFISSLNQLKNLDIC 284
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
IGDEGL L LK L+LS ++G G ++LS L L +++ + D +
Sbjct: 285 KNDIGDEGLEYFGQLAQLKSLDLSYNRIGDEGAQYLSELKQLIYLDIKTNHLGDKGAMPI 344
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
L L L ++ +I + G ++ L LT LD+ IT+ G Y K L L I
Sbjct: 345 GELKKLIYLYINNNKIRNEGAKYISELKQLTKLDIRNNFITEEGTKYFTEMKQLIDLTI 403
>gi|320169700|gb|EFW46599.1| protein tyrosine kinase [Capsaspora owczarzaki ATCC 30864]
Length = 1026
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 161/382 (42%), Gaps = 25/382 (6%)
Query: 85 SLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI 144
SL FN I+ GL++LT ++ + NN IT F GL ++ + DL
Sbjct: 69 SLQFN---HITSLATNAFTGLTSLTQVTLQNNN-ITNIVATTFTGLSSVTQTDLSYNKLT 124
Query: 145 HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQ 204
GL L L++ N IT S LT L L ++ + + + GL
Sbjct: 125 SLSANAFTGLTALAQLDLS-MNQITSIHATAFSDLTALTQLSLTNNIIRTIPSSAFTGLT 183
Query: 205 KLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI 264
L LNL G TA ++ + L +L YL+L C ++ F+ + +L L L N+I
Sbjct: 184 ALNTLNLGGNLFTAIPANAFTGLSALNYLSLFACLITVISANAFTGLTALTFLTLQSNQI 243
Query: 265 TDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLT 324
+ GLT L+ L L S I T L L L+LS + S +GL+
Sbjct: 244 LNIPANAFAGLTALQFLYLSSAQITSLSANAFTDLSALTQLDLSYNMITSLSANTFTGLS 303
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI 384
L ++LS+ I+ S GLS+L L L QIT A LT LT L LF +I
Sbjct: 304 ALTRLDLSYNMITSLSANTFTGLSALTQLYLFENQITSIPADAFAGLTALTQLFLFENQI 363
Query: 385 TDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
T A AGLT L L +S++RITS + L L +L
Sbjct: 364 TSIPADAF------------------AGLTALTQLELSHTRITSISANAFRGLTALTALY 405
Query: 445 LESCKVTANDIKRLQSRDLPNL 466
L S ++ N I DLP L
Sbjct: 406 LHSVQL--NSIPANAFTDLPTL 425
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 131/332 (39%), Gaps = 26/332 (7%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHG------------G 147
GLS++T N +T+ AF GL L +LDL + T IH
Sbjct: 107 FTGLSSVTQTDLSYNK-LTSLSANAFTGLTALAQLDLSMNQITSIHATAFSDLTALTQLS 165
Query: 148 LVN----------LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGI 197
L N GL L +LN+ N T +GL+ L L + +T
Sbjct: 166 LTNNIIRTIPSSAFTGLTALNTLNLG-GNLFTAIPANAFTGLSALNYLSLFACLITVISA 224
Query: 198 AYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
GL LT L L+ + ++ + L +L +L L+ Q++ F+ + +L L
Sbjct: 225 NAFTGLTALTFLTLQSNQILNIPANAFAGLTALQFLYLSSAQITSLSANAFTDLSALTQL 284
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGL 317
+L +N IT GL+ L L+L I TGL L L L + Q+ S
Sbjct: 285 DLSYNMITSLSANTFTGLSALTRLDLSYNMITSLSANTFTGLSALTQLYLFENQITSIPA 344
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
+GLT L + L I+ AGL++L L L +IT A LT LT L
Sbjct: 345 DAFAGLTALTQLFLFENQITSIPADAFAGLTALTQLELSHTRITSISANAFRGLTALTAL 404
Query: 378 DLFGARITDSGAAYLRNFKNLRSLEICGGGLT 409
L ++ A + L+ L + LT
Sbjct: 405 YLHSVQLNSIPANAFTDLPTLQRLALNDNPLT 436
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 140/332 (42%), Gaps = 31/332 (9%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
GL L+ L + + N +T + +GLT L L +S +++T + GL LT L+
Sbjct: 11 FAGLTALQYLELSY-NQLTGISAQAFTGLTALNYLDLSNNRITKIPGSLFTGLTMLTTLS 69
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
L+ +T+ ++ + L SL + L +++ F+ + S+ +L +N++T
Sbjct: 70 LQFNHITSLATNAFTGLTSLTQVTLQNNNITNIVATTFTGLSSVTQTDLSYNKLTSLSAN 129
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
GLT L L+L I + L L L L++ + + +GLT L ++N
Sbjct: 130 AFTGLTALAQLDLSMNQITSIHATAFSDLTALTQLSLTNNIIRTIPSSAFTGLTALNTLN 189
Query: 331 L-----------SFTGISD-------------GSLRKLAGLSSLKSLNLDARQITDTGLA 366
L +FTG+S S GL++L L L + QI +
Sbjct: 190 LGGNLFTAIPANAFTGLSALNYLSLFACLITVISANAFTGLTALTFLTLQSNQILNIPAN 249
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLN 420
A LT L L L A+IT A + L L++ +T GL+ L L+
Sbjct: 250 AFAGLTALQFLYLSSAQITSLSANAFTDLSALTQLDLSYNMITSLSANTFTGLSALTRLD 309
Query: 421 VSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
+S + ITS L L L L ++T+
Sbjct: 310 LSYNMITSLSANTFTGLSALTQLYLFENQITS 341
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 90/219 (41%), Gaps = 6/219 (2%)
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
QL F+ + +L+ L L +N++T GLT L L+L + I TG
Sbjct: 2 QLISIPANAFAGLTALQYLELSYNQLTGISAQAFTGLTALNYLDLSNNRITKIPGSLFTG 61
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L L L L + S +GLT+L + L I++ GLSS+ +L
Sbjct: 62 LTMLTTLSLQFNHITSLATNAFTGLTSLTQVTLQNNNITNIVATTFTGLSSVTQTDLSYN 121
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AG 412
++T A T LT L LDL +IT A + L L + + G
Sbjct: 122 KLTSLSANAFTGLTALAQLDLSMNQITSIHATAFSDLTALTQLSLTNNIIRTIPSSAFTG 181
Query: 413 LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
LT L +LN+ + T+ L L L+L +C +T
Sbjct: 182 LTALNTLNLGGNLFTAIPANAFTGLSALNYLSLFACLIT 220
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 91/224 (40%), Gaps = 2/224 (0%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLN 161
GL+ LT L+ + N + AFAGL L L L L L L+
Sbjct: 227 FTGLTALTFLTLQSNQILNIPA-NAFAGLTALQFLYLSSAQITSLSANAFTDLSALTQLD 285
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 221
+ + N IT +GL+ L L +S + +T GL LT L L +T+
Sbjct: 286 LSY-NMITSLSANTFTGLSALTRLDLSYNMITSLSANTFTGLSALTQLYLFENQITSIPA 344
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
D+ + L +L L L Q++ + F+ + +L L L IT +GLT L +L
Sbjct: 345 DAFAGLTALTQLFLFENQITSIPADAFAGLTALTQLELSHTRITSISANAFRGLTALTAL 404
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
L S + T L L+ L L+D + + GL N
Sbjct: 405 YLHSVQLNSIPANAFTDLPTLQRLALNDNPLTTLPPGLFKGLPN 448
>gi|149176763|ref|ZP_01855374.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148844404|gb|EDL58756.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 416
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 132/274 (48%), Gaps = 11/274 (4%)
Query: 192 VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI 251
+TD G YLK QKL L + G +T L+ L+ + SL L L+ ++ D +
Sbjct: 129 ITDQGATYLKQ-QKLGHLGITGGSMTDNGLNELAEMNSLRTLGLHHLAITGDQLPP-NTF 186
Query: 252 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ 311
LK+L+L T++ L +L +L L+L + + GL L+ NL+ L L + +
Sbjct: 187 PKLKMLDLSDTRFTNQGLKNLSPNASLVYLHLSNTNVSSAGLQELSKFPNLRALRLGNLK 246
Query: 312 VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 371
+ ++ L+ + L ++L T ++D +L+ L + L LD QITD GL L ++
Sbjct: 247 IKAAAFAKLANMKRLYQLDLQGTAVNDAVALQLSQLDQITQLRLDQSQITDQGLRHLATM 306
Query: 372 TGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL------TGLVSLNVSNSR 425
L L L GA+ITDSG L L L++ ++D GL L LN+SN+R
Sbjct: 307 KNLETLFLPGAKITDSGLKVLSQLPKLDYLDLSDTQISDEGLRQLSKIPALRMLNLSNTR 366
Query: 426 ITSAG---LRHLKPLKNLRSLTLESCKVTANDIK 456
+T L L+++ + VT DI+
Sbjct: 367 VTDQAKQILLQFPALESIEAFNTSISPVTIEDIR 400
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 116/236 (49%), Gaps = 1/236 (0%)
Query: 167 CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA 226
+TD+ + L+ + +L++L + +T + KL +L+L T L +LS
Sbjct: 151 SMTDNGLNELAEMNSLRTLGLHHLAITGDQLPP-NTFPKLKMLDLSDTRFTNQGLKNLSP 209
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC 286
SL YL+L+ +S G ++ SK +L+ L LG +I L + L L+L
Sbjct: 210 NASLVYLHLSNTNVSSAGLQELSKFPNLRALRLGNLKIKAAAFAKLANMKRLYQLDLQGT 269
Query: 287 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAG 346
+ D + L+ L + L L +Q+ GLRHL+ + NLE++ L I+D L+ L+
Sbjct: 270 AVNDAVALQLSQLDQITQLRLDQSQITDQGLRHLATMKNLETLFLPGAKITDSGLKVLSQ 329
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
L L L+L QI+D GL L+ + L L+L R+TD L F L S+E
Sbjct: 330 LPKLDYLDLSDTQISDEGLRQLSKIPALRMLNLSNTRVTDQAKQILLQFPALESIE 385
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%)
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
D P + LK L +S ++ T+ G+ L L L+L V++A L LS +L
Sbjct: 179 DQLPPNTFPKLKMLDLSDTRFTNQGLKNLSPNASLVYLHLSNTNVSSAGLQELSKFPNLR 238
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
L L ++ K + + L L+L + D + L L + L LD I D+
Sbjct: 239 ALRLGNLKIKAAAFAKLANMKRLYQLDLQGTAVNDAVALQLSQLDQITQLRLDQSQITDQ 298
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
GL +L + NL+ L L ++ SGL+ LS L L+ ++LS T ISD LR+L+ + +L+
Sbjct: 299 GLRHLATMKNLETLFLPGAKITDSGLKVLSQLPKLDYLDLSDTQISDEGLRQLSKIPALR 358
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
LNL ++TD L L ++ F I+
Sbjct: 359 MLNLSNTRVTDQAKQILLQFPALESIEAFNTSIS 392
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 143/312 (45%), Gaps = 39/312 (12%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLS------VDLSGSDVTDSGLIHLKDCSNLQS 85
++Q+L LG N +I QG++ L + ++G +TD+GL L + ++L++
Sbjct: 114 SIQNLTLG-----NPHNPTIITDQGATYLKQQKLGHLGITGGSMTDNGLNELAEMNSLRT 168
Query: 86 LDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIH 145
L GL HL AIT + L LDL +
Sbjct: 169 L-----------GLHHL---------------AITGDQLPP-NTFPKLKMLDLSDTRFTN 201
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
GL NL L L++ N ++ + ++ LS NL++L++ K+ + A L +++
Sbjct: 202 QGLKNLSPNASLVYLHLSNTN-VSSAGLQELSKFPNLRALRLGNLKIKAAAFAKLANMKR 260
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
L L+L+G V A LS L + L L++ Q++D G + + +L+ L L +IT
Sbjct: 261 LYQLDLQGTAVNDAVALQLSQLDQITQLRLDQSQITDQGLRHLATMKNLETLFLPGAKIT 320
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
D L L L L+ L+L I DEGL L+ + L+ L LS+T+V + L
Sbjct: 321 DSGLKVLSQLPKLDYLDLSDTQISDEGLRQLSKIPALRMLNLSNTRVTDQAKQILLQFPA 380
Query: 326 LESINLSFTGIS 337
LESI T IS
Sbjct: 381 LESIEAFNTSIS 392
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 110/234 (47%), Gaps = 28/234 (11%)
Query: 236 NRCQLSDDGCE--KFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI-GDEG 292
N ++D G K K+G L + +TD L L + +L +L L I GD+
Sbjct: 125 NPTIITDQGATYLKQQKLGHLGITG---GSMTDNGLNELAEMNSLRTLGLHHLAITGDQL 181
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
N LK L+LSDT+ + GL++LS +L ++LS T +S L++L+ +L++
Sbjct: 182 PPN--TFPKLKMLDLSDTRFTNQGLKNLSPNASLVYLHLSNTNVSSAGLQELSKFPNLRA 239
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
L L +I A L ++ L LDL G + D+ A L +
Sbjct: 240 LRLGNLKIKAAAFAKLANMKRLYQLDLQGTAVNDAVALQL------------------SQ 281
Query: 413 LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
L + L + S+IT GLRHL +KNL +L L K+T + +K L LP L
Sbjct: 282 LDQITQLRLDQSQITDQGLRHLATMKNLETLFLPGAKITDSGLKVLSQ--LPKL 333
>gi|149175664|ref|ZP_01854283.1| hypothetical protein PM8797T_31103 [Planctomyces maris DSM 8797]
gi|148845383|gb|EDL59727.1| hypothetical protein PM8797T_31103 [Planctomyces maris DSM 8797]
Length = 660
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 150/340 (44%), Gaps = 50/340 (14%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF-RRNNAITAQGMKAFAGLINLVKLDLE 139
+ L+ LD + ++D L HLR L+ L L N IT +G++ L LDL
Sbjct: 334 TQLRELDLSGNSSLNDVALFHLRNLNQLEELKVASYYNRITEKGLQYLRQPRKLKTLDLI 393
Query: 140 RCTRIHGGLVNLKGLMKLESLNIK-WCNCITDSDM-KPLSGLTNLKSLQISCSKVTDSGI 197
C GL + + LE+LN+K +C D+ PL L +L+ L + C +
Sbjct: 394 GCMLKADGLAAIGDVSSLETLNLKVYCPERVDAHFFDPLRHLKSLRELTLECRQ------ 447
Query: 198 AYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
LKG L SLS L L L+L + +L D+ + SLK L
Sbjct: 448 --LKG---------------GEGLSSLSQLPELEALHLLQTKLQDEDIRWIANCNSLKAL 490
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN---------------------- 295
L E+TD+ + L L LESLNLD C + GLV+
Sbjct: 491 TLNSYEVTDQGVSSLGSLKQLESLNLDRCRLDGSGLVSLQQLHRLTDVSLNHTGVTDAVI 550
Query: 296 --LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
L+ L LK L L + +V S+ L L L L +NL+ +SD L +S+L++L
Sbjct: 551 PFLSSLSQLKRLTLENGRVSSATLESLKDLKKLSELNLTNCPVSDEICELLTQMSALRTL 610
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
NL+ ++++ GL L TGL L L ++T G LR
Sbjct: 611 NLNKTKVSNIGLEGLQKATGLETLSLRRTKVTRQGVQQLR 650
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 148/280 (52%), Gaps = 7/280 (2%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR--NNAITAQGMKA 126
+T+ GL +L+ L++LD C+ +DG L + +S+L +L+ + + A
Sbjct: 373 ITEKGLQYLRQPRKLKTLDLIGCMLKADG-LAAIGDVSSLETLNLKVYCPERVDAHFFDP 431
Query: 127 FAGLINLVKLDLERCTRIHGG--LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
L +L +L LE C ++ GG L +L L +LE+L++ + D D++ ++ +LK+
Sbjct: 432 LRHLKSLRELTLE-CRQLKGGEGLSSLSQLPELEALHLLQTK-LQDEDIRWIANCNSLKA 489
Query: 185 LQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
L ++ +VTD G++ L L++L LNL+ C + + L SL L L ++LN ++D
Sbjct: 490 LTLNSYEVTDQGVSSLGSLKQLESLNLDRCRLDGSGLVSLQQLHRLTDVSLNHTGVTDAV 549
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
S + LK L L ++ L LK L L LNL +C + DE LT + L+
Sbjct: 550 IPFLSSLSQLKRLTLENGRVSSATLESLKDLKKLSELNLTNCPVSDEICELLTQMSALRT 609
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
L L+ T+V + GL L T LE+++L T ++ +++L
Sbjct: 610 LNLNKTKVSNIGLEGLQKATGLETLSLRRTKVTRQGVQQL 649
>gi|290977929|ref|XP_002671689.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284085260|gb|EFC38945.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 434
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 151/302 (50%), Gaps = 10/302 (3%)
Query: 179 LTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
NLK L+I + D G + ++ LT LN+ C +T+ + + L L YLN+
Sbjct: 117 FPNLKRLEIGDNQQFGDCGAESISKIKTLTSLNVLDCGITSKGAEFIGLLNGLTYLNIGN 176
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
++ D G + K+ SL VL +G EIT E + + L SL++ S + E +++
Sbjct: 177 NKIMDSGMKFIGKLSSLNVLQIGSTEITSESFKLVGCMKGLTSLSIYSNPVTIEDAKSIS 236
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA 357
+ LK L +S+T + GL++LS LT L +++L+ I++ L ++ + + L L
Sbjct: 237 SIHGLKSLNISNTGISVEGLKYLSALTLLTNLSLAKNNITNEGLLSISQMKQITKLFLQH 296
Query: 358 RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLV 417
I G L+++T L L++ +IT G ++ + KN+ SL I L D L +
Sbjct: 297 NVIDCDGAQLLSTMTNLRLLNISQTKITTEGIKHITSLKNITSLNISINQLNDEALKLVS 356
Query: 418 SLN------VSNSRITSAGLRHLKPLKNLRSLTLESCKVT---ANDIKRLQSRDLPNLVS 468
S+N N+++TS G +H+ L NL L + S V AN + ++ + + N+ +
Sbjct: 357 SMNQLTNLSTHNNKLTSEGAKHISQLNNLTELNISSNPVRIEGANYLNQMTTLKIINVSN 416
Query: 469 FR 470
R
Sbjct: 417 CR 418
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 196/428 (45%), Gaps = 50/428 (11%)
Query: 1 MLPRDISQQIFNELVYSRCLTE---VSLEAF-----RDCALQDLCLGQYPGVNDKWMDVI 52
+ P DI ++I L + L +S + F R A L GQ W+ I
Sbjct: 24 LFPDDICEEIMQWLAWKEVLLNCCLISKQWFTIAKSRYRASIQLTYGQ----EKLWLCFI 79
Query: 53 ASQGSSL-----LSVD---LSGSDVTDS--GLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
Q + + VD + GS DS I K NL+ L+ Q D G E +
Sbjct: 80 KEQQEGISRIFNIGVDSFRVVGSYFIDSINAEIISKSFPNLKRLEIGDNQQFGDCGAESI 139
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
+ LTSL+ + IT++G + F GL+N GL L N
Sbjct: 140 SKIKTLTSLNVL-DCGITSKGAE-FIGLLN--------------------GLTYLNIGN- 176
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
N I DS MK + L++L LQI +++T + ++ LT L++ PVT
Sbjct: 177 ---NKIMDSGMKFIGKLSSLNVLQIGSTEITSESFKLVGCMKGLTSLSIYSNPVTIEDAK 233
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
S+S++ L LN++ +S +G + S + L L+L N IT+E L+ + + + L
Sbjct: 234 SISSIHGLKSLNISNTGISVEGLKYLSALTLLTNLSLAKNNITNEGLLSISQMKQITKLF 293
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
L I +G L+ + NL+ L +S T++ + G++H++ L N+ S+N+S ++D +L+
Sbjct: 294 LQHNVIDCDGAQLLSTMTNLRLLNISQTKITTEGIKHITSLKNITSLNISINQLNDEALK 353
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
++ ++ L +L+ ++T G ++ L LT L++ + GA YL L+ +
Sbjct: 354 LVSSMNQLTNLSTHNNKLTSEGAKHISQLNNLTELNISSNPVRIEGANYLNQMTTLKIIN 413
Query: 403 I--CGGGL 408
+ C G+
Sbjct: 414 VSNCRTGI 421
>gi|283778456|ref|YP_003369211.1| hypothetical protein Psta_0665 [Pirellula staleyi DSM 6068]
gi|283436909|gb|ADB15351.1| hypothetical protein Psta_0665 [Pirellula staleyi DSM 6068]
Length = 397
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 11/278 (3%)
Query: 195 SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSL 254
G+ L G++ ++L G T C+D L + L +++++ +S G + + L
Sbjct: 104 EGVHQLHGIRDISL---HGRAFTDKCIDELIKVHQLRGVSISKTSISPAGLARLASCREL 160
Query: 255 KVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS 314
++L EI D+ L + G+ +++ L + I DEGL + NL LE+ +
Sbjct: 161 VSISLWGPEIEDDHLKAVAGIPSVQHLQVIRSSITDEGLQHFAERENLATLEIYVAAITD 220
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 374
+GL+ L L L + L T ++D S+ + SL+ L LDA I+D GL L+ L
Sbjct: 221 AGLKSLVNLPKLRKLELLGTSVTDQSMPTIGRFRSLRQLRLDAHSISDEGLTFLSRNEKL 280
Query: 375 THLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS------LNVSNSRITS 428
L + G I +G A L +NLR ++ + D GL + S L + S++T
Sbjct: 281 EVLLVSGCPIDGTGFAKLCELQNLRLVDASSTNINDEGLAAIASLPGLTLLEIRQSKVTG 340
Query: 429 AGLRHLKPLKNLRSLTLE-SCKVTANDIKRLQSRDLPN 465
GL+HL+ + LRSL + + ++T +D K L+++ LPN
Sbjct: 341 KGLQHLERSEQLRSLLISITDELTLDDAKALKAK-LPN 377
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 117/238 (49%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
TD + L + L+ + IS + ++ +G+A L ++L ++L G + L +++
Sbjct: 120 RAFTDKCIDELIKVHQLRGVSISKTSISPAGLARLASCRELVSISLWGPEIEDDHLKAVA 179
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
+ S+ +L + R ++D+G + F++ +L L + ITD L L L L L L
Sbjct: 180 GIPSVQHLQVIRSSITDEGLQHFAERENLATLEIYVAAITDAGLKSLVNLPKLRKLELLG 239
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
+ D+ + + +L+ L L + GL LS LE + +S I KL
Sbjct: 240 TSVTDQSMPTIGRFRSLRQLRLDAHSISDEGLTFLSRNEKLEVLLVSGCPIDGTGFAKLC 299
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
L +L+ ++ + I D GLAA+ SL GLT L++ +++T G +L + LRSL I
Sbjct: 300 ELQNLRLVDASSTNINDEGLAAIASLPGLTLLEIRQSKVTGKGLQHLERSEQLRSLLI 357
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 139/311 (44%), Gaps = 25/311 (8%)
Query: 40 QYPGVND---------KWMDVIASQ--GSSLLSVDL----SGSDVTDSGLIH-LKDCSNL 83
+YP V D +W+ + + G+++L+V SG D+ +H ++D S L
Sbjct: 59 EYPNVIDGSIQQSNQPRWLRYLFGENFGANVLTVTARGTSSGDDIEGVHQLHGIRDIS-L 117
Query: 84 QSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTR 143
F +D ++ L + L +S + +I+ G+ A LV + L
Sbjct: 118 HGRAF------TDKCIDELIKVHQLRGVSISKT-SISPAGLARLASCRELVSISLWGPEI 170
Query: 144 IHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGL 203
L + G+ ++ L + + ITD ++ + NL +L+I + +TD+G+ L L
Sbjct: 171 EDDHLKAVAGIPSVQHLQVI-RSSITDEGLQHFAERENLATLEIYVAAITDAGLKSLVNL 229
Query: 204 QKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNE 263
KL L L G VT + ++ SL L L+ +SD+G S+ L+VL +
Sbjct: 230 PKLRKLELLGTSVTDQSMPTIGRFRSLRQLRLDAHSISDEGLTFLSRNEKLEVLLVSGCP 289
Query: 264 ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL 323
I L L NL ++ S I DEGL + L L LE+ ++V GL+HL
Sbjct: 290 IDGTGFAKLCELQNLRLVDASSTNINDEGLAAIASLPGLTLLEIRQSKVTGKGLQHLERS 349
Query: 324 TNLESINLSFT 334
L S+ +S T
Sbjct: 350 EQLRSLLISIT 360
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 1/208 (0%)
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
GL L +L S+++ W I D +K ++G+ +++ LQ+ S +TD G+ + +
Sbjct: 149 AGLARLASCRELVSISL-WGPEIEDDHLKAVAGIPSVQHLQVIRSSITDEGLQHFAEREN 207
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
L L + +T A L SL L L L L ++D + SL+ L L + I+
Sbjct: 208 LATLEIYVAAITDAGLKSLVNLPKLRKLELLGTSVTDQSMPTIGRFRSLRQLRLDAHSIS 267
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
DE L L LE L + C I G L L NL+ ++ S T + GL ++ L
Sbjct: 268 DEGLTFLSRNEKLEVLLVSGCPIDGTGFAKLCELQNLRLVDASSTNINDEGLAAIASLPG 327
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSL 353
L + + + ++ L+ L L+SL
Sbjct: 328 LTLLEIRQSKVTGKGLQHLERSEQLRSL 355
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 8/232 (3%)
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
S D E ++ ++ ++L TD+C+ L + L +++ I GL L
Sbjct: 99 SGDDIEGVHQLHGIRDISLHGRAFTDKCIDELIKVHQLRGVSISKTSISPAGLARLASCR 158
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
L + L ++ L+ ++G+ +++ + + + I+D L+ A +L +L + I
Sbjct: 159 ELVSISLWGPEIEDDHLKAVAGIPSVQHLQVIRSSITDEGLQHFAERENLATLEIYVAAI 218
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT------ 414
TD GL +L +L L L+L G +TD + F++LR L + ++D GLT
Sbjct: 219 TDAGLKSLVNLPKLRKLELLGTSVTDQSMPTIGRFRSLRQLRLDAHSISDEGLTFLSRNE 278
Query: 415 GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
L L VS I G L L+NLR + S + + + S LP L
Sbjct: 279 KLEVLLVSGCPIDGTGFAKLCELQNLRLVDASSTNINDEGLAAIAS--LPGL 328
>gi|290999929|ref|XP_002682532.1| predicted protein [Naegleria gruberi]
gi|284096159|gb|EFC49788.1| predicted protein [Naegleria gruberi]
Length = 339
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 133/292 (45%), Gaps = 6/292 (2%)
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
+ LSGL LKSL I S++ G+ Y+ L++LT L++ + LS L L
Sbjct: 44 VHHLSGLKQLKSLHIYGSQIRGEGVRYISELKQLTNLDIRSHNIFHIGAKYLSELKQLTT 103
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
LN+ + G + S++ L L + N I E +L L L +L + +G+EG
Sbjct: 104 LNIYGNHIGAKGSKYISELNQLTTLFIAENSIGVEGAKYLSELKQLTNLGISVNWLGNEG 163
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
L ++ + L L++S +G+ G +HL L L +N+S I D L + L L +
Sbjct: 164 LAYVSKIKQLTILDISHNDIGAEGGKHLGELKQLTLLNISHNKIQDEGLENIGKLKQLTT 223
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
L ++ I G L+ L LT L++ RI D G+ Y+ K L L I + + G
Sbjct: 224 LIINQNDIGAEGAQYLSELKQLTFLNISDNRIGDEGSKYIGELKQLVDLYINDNDIGEEG 283
Query: 413 ------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
L L+ LNV + G +++ LK L L + + + K L
Sbjct: 284 AKYLRDLKQLIYLNVGGNEFGDEGAKYISELKQLTKLDINNNSIGDEGTKHL 335
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 2/298 (0%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
+ HL GL L SL + I +G++ + L L LD+ H G L L +L
Sbjct: 44 VHHLSGLKQLKSLHIY-GSQIRGEGVRYISELKQLTNLDIRSHNIFHIGAKYLSELKQLT 102
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
+LNI + N I K +S L L +L I+ + + G YL L++LT L + +
Sbjct: 103 TLNI-YGNHIGAKGSKYISELNQLTTLFIAENSIGVEGAKYLSELKQLTNLGISVNWLGN 161
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
L +S + L L+++ + +G + ++ L +LN+ N+I DE L ++ L L
Sbjct: 162 EGLAYVSKIKQLTILDISHNDIGAEGGKHLGELKQLTLLNISHNKIQDEGLENIGKLKQL 221
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
+L ++ IG EG L+ L L L +SD ++G G +++ L L + ++ I +
Sbjct: 222 TTLIINQNDIGAEGAQYLSELKQLTFLNISDNRIGDEGSKYIGELKQLVDLYINDNDIGE 281
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
+ L L L LN+ + D G ++ L LT LD+ I D G +L K
Sbjct: 282 EGAKYLRDLKQLIYLNVGGNEFGDEGAKYISELKQLTKLDINNNSIGDEGTKHLSEMK 339
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 136/301 (45%), Gaps = 13/301 (4%)
Query: 76 HLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
HL L+SL + QI G+ ++ L LT+L R +N I G K + L L
Sbjct: 46 HLSGLKQLKSLHI-YGSQIRGEGVRYISELKQLTNLDIRSHN-IFHIGAKYLSELKQLTT 103
Query: 136 LDLERCTRIHGGLVNLKGLMKLESLN-----IKWCNCITDSDMKPLSGLTNLKSLQISCS 190
L+ I+G + KG + LN N I K LS L L +L IS +
Sbjct: 104 LN------IYGNHIGAKGSKYISELNQLTTLFIAENSIGVEGAKYLSELKQLTNLGISVN 157
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
+ + G+AY+ +++LT+L++ + A L L L LN++ ++ D+G E K
Sbjct: 158 WLGNEGLAYVSKIKQLTILDISHNDIGAEGGKHLGELKQLTLLNISHNKIQDEGLENIGK 217
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
+ L L + N+I E +L L L LN+ IGDEG + L L L ++D
Sbjct: 218 LKQLTTLIINQNDIGAEGAQYLSELKQLTFLNISDNRIGDEGSKYIGELKQLVDLYINDN 277
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
+G G ++L L L +N+ D + ++ L L L+++ I D G L+
Sbjct: 278 DIGEEGAKYLRDLKQLIYLNVGGNEFGDEGAKYISELKQLTKLDINNNSIGDEGTKHLSE 337
Query: 371 L 371
+
Sbjct: 338 M 338
>gi|301126468|ref|XP_002909849.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262101999|gb|EEY60051.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 427
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 175/336 (52%), Gaps = 15/336 (4%)
Query: 55 QGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL-RGLSN-LTSL 111
Q L V+L+G S +TD + L + S L S+ C Q++D ++ L SN LTS+
Sbjct: 84 QFPHLKEVNLTGCSSLTDESVEQLANLSGLTSVALKGCYQVTDKSIKLLTESQSNSLTSV 143
Query: 112 SFRRNNAITAQGMKAFAG-LINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCN--C 167
+ ++ +G+ A A L L L+L C+++ G+ L L L++LN+ +CN
Sbjct: 144 NLGYCKVVSDEGITAIASNLSKLNYLNLRGCSQVGDNGIRALARLKNLQTLNLWYCNQGA 203
Query: 168 ITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLS 225
+TD + L+ +T+L SL +S CS++TD GI+ L L KL L + VT +L+
Sbjct: 204 LTDGGISALAEVTSLTSLNLSNCSQLTDEGISSLSTLVKLRHLEIANVGEVTDQGFLALA 263
Query: 226 ALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNL 283
L +L L++ C ++D G E L NL + +EI D H++ LT + LN
Sbjct: 264 PLVNLVTLDVAGCYNITDAGTEVLVNFPKLASCNLWYCSEIGDATFQHMESLTKMRFLNF 323
Query: 284 DSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLSGLTNLESINL-SFTGISDGS 340
CG + D GL ++ L NL L++ S V GL LS L L+S+ L +GI D
Sbjct: 324 MKCGKVTDRGLRSIAKLRNLTSLDMVSCFNVTDEGLNELSKLNRLKSLYLGGCSGIRDEG 383
Query: 341 LRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLT 375
+ L+ LSSL L+L + RQ+ + L + TG++
Sbjct: 384 IAALSHLSSLVILDLSNCRQVGNKALLGIDDGTGVS 419
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 162/312 (51%), Gaps = 15/312 (4%)
Query: 20 LTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIA-SQGSSLLSVDLSGSDV-TDSGLIH 76
LT+ S+E + + L + L V DK + ++ SQ +SL SV+L V +D G+
Sbjct: 99 LTDESVEQLANLSGLTSVALKGCYQVTDKSIKLLTESQSNSLTSVNLGYCKVVSDEGITA 158
Query: 77 L-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN--AITAQGMKAFAGLINL 133
+ + S L L+ C Q+ D G+ L L NL +L+ N A+T G+ A A + +L
Sbjct: 159 IASNLSKLNYLNLRGCSQVGDNGIRALARLKNLQTLNLWYCNQGALTDGGISALAEVTSL 218
Query: 134 VKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSK 191
L+L C+++ G+ +L L+KL L I +TD L+ L NL +L ++ C
Sbjct: 219 TSLNLSNCSQLTDEGISSLSTLVKLRHLEIANVGEVTDQGFLALAPLVNLVTLDVAGCYN 278
Query: 192 VTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFS 249
+TD+G L KL NL C + A + +L + +LN +C +++D G +
Sbjct: 279 ITDAGTEVLVNFPKLASCNLWYCSEIGDATFQHMESLTKMRFLNFMKCGKVTDRGLRSIA 338
Query: 250 KIGSLKVLNLG--FNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLE 306
K+ +L L++ FN +TDE L L L L+SL L C GI DEG+ L+ L +L L+
Sbjct: 339 KLRNLTSLDMVSCFN-VTDEGLNELSKLNRLKSLYLGGCSGIRDEGIAALSHLSSLVILD 397
Query: 307 LSD-TQVGSSGL 317
LS+ QVG+ L
Sbjct: 398 LSNCRQVGNKAL 409
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 166/342 (48%), Gaps = 50/342 (14%)
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF--AGLINLVKLDLE 139
+L+ ++ C ++D +E L LS LTS++ + +T + +K + +L ++L
Sbjct: 87 HLKEVNLTGCSSLTDESVEQLANLSGLTSVALKGCYQVTDKSIKLLTESQSNSLTSVNLG 146
Query: 140 RCTRI--HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSK--VTD 194
C + G L KL LN++ C+ + D+ ++ L+ L NL++L + C++ +TD
Sbjct: 147 YCKVVSDEGITAIASNLSKLNYLNLRGCSQVGDNGIRALARLKNLQTLNLWYCNQGALTD 206
Query: 195 SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS---KI 251
GI+ L + LT LNL C QL+D+G S K+
Sbjct: 207 GGISALAEVTSLTSLNLSNCS-----------------------QLTDEGISSLSTLVKL 243
Query: 252 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC----GIGDEGLVNLTGL--CNL-KC 304
L++ N+G E+TD+ + L L NL +L++ C G E LVN L CNL C
Sbjct: 244 RHLEIANVG--EVTDQGFLALAPLVNLVTLDVAGCYNITDAGTEVLVNFPKLASCNLWYC 301
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTG-ISDGSLRKLAGLSSLKSLNL-DARQITD 362
+++G + +H+ LT + +N G ++D LR +A L +L SL++ +TD
Sbjct: 302 -----SEIGDATFQHMESLTKMRFLNFMKCGKVTDRGLRSIAKLRNLTSLDMVSCFNVTD 356
Query: 363 TGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEI 403
GL L+ L L L L G + I D G A L + +L L++
Sbjct: 357 EGLNELSKLNRLKSLYLGGCSGIRDEGIAALSHLSSLVILDL 398
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 133/264 (50%), Gaps = 51/264 (19%)
Query: 233 LNLNRCQ-LSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLT-----NLESLNLDS 285
+NL C L+D+ E+ + + L + L G ++TD+ +K LT +L S+NL
Sbjct: 91 VNLTGCSSLTDESVEQLANLSGLTSVALKGCYQVTDK---SIKLLTESQSNSLTSVNLGY 147
Query: 286 CGI-GDEGLVNL-TGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFT---GISDG 339
C + DEG+ + + L L L L +QVG +G+R L+ L NL+++NL + ++DG
Sbjct: 148 CKVVSDEGITAIASNLSKLNYLNLRGCSQVGDNGIRALARLKNLQTLNLWYCNQGALTDG 207
Query: 340 SLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKN 397
+ LA ++SL SLNL + Q+TD G+++L++L L HL++ +TD G L N
Sbjct: 208 GISALAEVTSLTSLNLSNCSQLTDEGISSLSTLVKLRHLEIANVGEVTDQGFLALAPLVN 267
Query: 398 LRSLEICG-GGLTDAG-------------------------------LTGLVSLNVSN-S 424
L +L++ G +TDAG LT + LN
Sbjct: 268 LVTLDVAGCYNITDAGTEVLVNFPKLASCNLWYCSEIGDATFQHMESLTKMRFLNFMKCG 327
Query: 425 RITSAGLRHLKPLKNLRSLTLESC 448
++T GLR + L+NL SL + SC
Sbjct: 328 KVTDRGLRSIAKLRNLTSLDMVSC 351
>gi|325106627|ref|YP_004267695.1| hypothetical protein Plabr_0042 [Planctomyces brasiliensis DSM
5305]
gi|324966895|gb|ADY57673.1| leucine-rich repeat-containing protein [Planctomyces brasiliensis
DSM 5305]
Length = 526
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 182/422 (43%), Gaps = 66/422 (15%)
Query: 55 QGSSLLSVDLSGSD------------------------VTDSGLIHLKDCSNLQSLDFNF 90
Q SL +DLSG+ VTD+GL ++K L+S+D N
Sbjct: 94 QLRSLQELDLSGTSLDDIGMEKLSKLEQLRTFAIAKTRVTDNGLRYVKAFRFLKSIDLNQ 153
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN 150
++S+ GL HL GL +L ++ RR +++ +K L+ L KLDL H GL
Sbjct: 154 N-KLSEAGLCHLEGLVSLREVNLRR-SSVNGAALKWLQRLVLLEKLDLRNTNFTHHGLSF 211
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
L +L SL + N I D + PL L+SL +S + ++D + L L +L L
Sbjct: 212 LTYFRRLRSLKLG-GNRIEDDGLFPLLQFPRLESLDLSGTPISDQAMKTLAQLPRLKRLY 270
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK-------------------I 251
+ G V+ L L+++ +L L++ + ++ G ++ + I
Sbjct: 271 VPGTAVSDEGLQLLTSVSTLIALDVRKTAVTPSGVQQLEQHSPGLKIKSDAADLPSSHVI 330
Query: 252 GSLKVLNLGFNEIT---------------DECLVH----LKGLTNLESLNLDSCGIGDEG 292
S VL + +T +H L+ ++L+SL L+ + E
Sbjct: 331 RSRDVLQMHGCHLTLSRSGDVIACQAGEDASPPIHWFSALESFSSLKSLELNRLALDGEQ 390
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
L L + L+ L L L L L L ++L T +SD SL+ L L SL +
Sbjct: 391 LQFLKNMSQLQSLALKQCTFPPEALSVLKSLNRLAWLDLRDTPVSDESLQALGELPSLSN 450
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
L L +T TGL +L+S L L + +I D L FKNL+ L+I G +T+
Sbjct: 451 LCLSRTGVTATGLESLSSAPLLRDLVIKECGQIGDPAVLALEKFKNLKHLDIRGTNITEQ 510
Query: 412 GL 413
G
Sbjct: 511 GF 512
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 130/280 (46%), Gaps = 10/280 (3%)
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 221
++W D P NL+ L ++ +A + + L L + C + L
Sbjct: 34 VRWDQSPEDFPALP----ENLQELDLTNCPCGSKILAQPEFQETLLKLKCQNCDIDFDTL 89
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
+ + L SL L+L+ L D G EK SK+ L+ + +TD L ++K L+S+
Sbjct: 90 ELIGQLRSLQELDLSGTSLDDIGMEKLSKLEQLRTFAIAKTRVTDNGLRYVKAFRFLKSI 149
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 341
+L+ + + GL +L GL +L+ + L + V + L+ L L LE ++L T + L
Sbjct: 150 DLNQNKLSEAGLCHLEGLVSLREVNLRRSSVNGAALKWLQRLVLLEKLDLRNTNFTHHGL 209
Query: 342 RKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
L L+SL L +I D GL L L LDL G I+D L L+ L
Sbjct: 210 SFLTYFRRLRSLKLGGNRIEDDGLFPLLQFPRLESLDLSGTPISDQAMKTLAQLPRLKRL 269
Query: 402 EICGGGLTDAGL------TGLVSLNVSNSRITSAGLRHLK 435
+ G ++D GL + L++L+V + +T +G++ L+
Sbjct: 270 YVPGTAVSDEGLQLLTSVSTLIALDVRKTAVTPSGVQQLE 309
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 131/275 (47%), Gaps = 4/275 (1%)
Query: 122 QGMKAFAGLI-NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG-L 179
Q + F L NL +LDL C G + + + L +K NC D D L G L
Sbjct: 38 QSPEDFPALPENLQELDLTNCP--CGSKILAQPEFQETLLKLKCQNCDIDFDTLELIGQL 95
Query: 180 TNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ 239
+L+ L +S + + D G+ L L++L + VT L + A L ++LN+ +
Sbjct: 96 RSLQELDLSGTSLDDIGMEKLSKLEQLRTFAIAKTRVTDNGLRYVKAFRFLKSIDLNQNK 155
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
LS+ G + SL+ +NL + + L L+ L LE L+L + GL LT
Sbjct: 156 LSEAGLCHLEGLVSLREVNLRRSSVNGAALKWLQRLVLLEKLDLRNTNFTHHGLSFLTYF 215
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 359
L+ L+L ++ GL L LES++LS T ISD +++ LA L LK L +
Sbjct: 216 RRLRSLKLGGNRIEDDGLFPLLQFPRLESLDLSGTPISDQAMKTLAQLPRLKRLYVPGTA 275
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
++D GL LTS++ L LD+ +T SG L
Sbjct: 276 VSDEGLQLLTSVSTLIALDVRKTAVTPSGVQQLEQ 310
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 127/282 (45%), Gaps = 6/282 (2%)
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
+L +S + S + + L L+L CP + L +L L C + D
Sbjct: 28 ALDLSAVRWDQSPEDFPALPENLQELDLTNCPCGSKILAQPEFQETLLKLKCQNCDIDFD 87
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
E ++ SL+ L+L + D + L L L + + + D GL + LK
Sbjct: 88 TLELIGQLRSLQELDLSGTSLDDIGMEKLSKLEQLRTFAIAKTRVTDNGLRYVKAFRFLK 147
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
++L+ ++ +GL HL GL +L +NL + ++ +L+ L L L+ L+L T
Sbjct: 148 SIDLNQNKLSEAGLCHLEGLVSLREVNLRRSSVNGAALKWLQRLVLLEKLDLRNTNFTHH 207
Query: 364 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLV 417
GL+ LT L L L G RI D G L F L SL++ G ++D A L L
Sbjct: 208 GLSFLTYFRRLRSLKLGGNRIEDDGLFPLLQFPRLESLDLSGTPISDQAMKTLAQLPRLK 267
Query: 418 SLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
L V + ++ GL+ L + L +L + VT + +++L+
Sbjct: 268 RLYVPGTAVSDEGLQLLTSVSTLIALDVRKTAVTPSGVQQLE 309
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 159/378 (42%), Gaps = 45/378 (11%)
Query: 130 LINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISC 189
L +L +LDL + G+ L L +L + I +TD+ ++ + LKS+ ++
Sbjct: 95 LRSLQELDLSGTSLDDIGMEKLSKLEQLRTFAIAKTR-VTDNGLRYVKAFRFLKSIDLNQ 153
Query: 190 SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS 249
+K++++G+ +L+GL L +NL V A L L L L L+L + G +
Sbjct: 154 NKLSEAGLCHLEGLVSLREVNLRRSSVNGAALKWLQRLVLLEKLDLRNTNFTHHGLSFLT 213
Query: 250 KIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSD 309
L+ L LG N I D+ L L LESL+L I D+ + L L LK L +
Sbjct: 214 YFRRLRSLKLGGNRIEDDGLFPLLQFPRLESLDLSGTPISDQAMKTLAQLPRLKRLYVPG 273
Query: 310 TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT------ 363
T V GL+ L+ ++ L ++++ T ++ +++L S + DA + +
Sbjct: 274 TAVSDEGLQLLTSVSTLIALDVRKTAVTPSGVQQLEQHSPGLKIKSDAADLPSSHVIRSR 333
Query: 364 --------------------------------GLAALTSLTGLTHLDLFGARITDSGAAY 391
+AL S + L L+L + +
Sbjct: 334 DVLQMHGCHLTLSRSGDVIACQAGEDASPPIHWFSALESFSSLKSLELNRLALDGEQLQF 393
Query: 392 LRNFKNLRSLEICGGGLTDAGLTGLVSLN------VSNSRITSAGLRHLKPLKNLRSLTL 445
L+N L+SL + L+ L SLN + ++ ++ L+ L L +L +L L
Sbjct: 394 LKNMSQLQSLALKQCTFPPEALSVLKSLNRLAWLDLRDTPVSDESLQALGELPSLSNLCL 453
Query: 446 ESCKVTANDIKRLQSRDL 463
VTA ++ L S L
Sbjct: 454 SRTGVTATGLESLSSAPL 471
>gi|290978443|ref|XP_002671945.1| predicted protein [Naegleria gruberi]
gi|284085518|gb|EFC39201.1| predicted protein [Naegleria gruberi]
Length = 381
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 166/351 (47%), Gaps = 30/351 (8%)
Query: 100 EHLRGLSNLTSLSF--RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
EHL+ +S + L+ N +G + +G++ L L++ + G + + +L
Sbjct: 17 EHLKEISEMKGLTLLDVSENKFGKEGAEKISGMVGLTTLNINDNYILDEGAKFIGTMKQL 76
Query: 158 ESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
L +K+C I + + +S L NL L + + + D G +Y+ + LT LN+ +T
Sbjct: 77 TLLKMKYCE-IREEGARAISELKNLTFLNLHGNFIGDKGASYISEMVNLTHLNVGSTQLT 135
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK---VLNLGFNEITDECLVHLKG 274
A +S L +L L ++ Q+ G + S + L+ L++ N I D+ + +L
Sbjct: 136 AEGARHVSGLKNLKSLLIHTNQIGHQGAKWISTMKDLEGLTSLDVSGNSILDQGVQYLSE 195
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS-- 332
++NL L++ S +G +G+ ++ G+ L L +S +GSSG + +SG++NL S+N+S
Sbjct: 196 MSNLTHLDIGSNHVGVKGIESIIGMKGLISLNVSSNDLGSSGAKLISGMSNLTSLNISAN 255
Query: 333 --------FTG--------------ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
F G I D + + + LKSLN +I+ G +++
Sbjct: 256 RLLGEGAKFIGEMHNVTILVIRNNDIGDEGAKFICKMKQLKSLNAVYNRISSKGFESISE 315
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNV 421
+ LT LD+ I GA +R KNL SL + + D GL + L +
Sbjct: 316 MKQLTSLDIGYNSIDSKGAKSVRKLKNLTSLNVRSNMIDDEGLKAIGQLKI 366
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 133/281 (47%), Gaps = 33/281 (11%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+ NLKSL I + + D + + ++ LTLL++ + +S + L LN+N
Sbjct: 1 MQNLKSLSIVGNGLVDEHLKEISEMKGLTLLDVSENKFGKEGAEKISGMVGLTTLNINDN 60
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
+ D+G + + L +L + + EI +E + L NL LNL IGD+G ++
Sbjct: 61 YILDEGAKFIGTMKQLTLLKMKYCEIREEGARAISELKNLTFLNLHGNFIGDKGASYISE 120
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
+ NL L + TQ+ + G RH+SGL N LKSL +
Sbjct: 121 MVNLTHLNVGSTQLTAEGARHVSGLKN------------------------LKSLLIHTN 156
Query: 359 QITDTG---LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI------CGGGLT 409
QI G ++ + L GLT LD+ G I D G YL NL L+I G +
Sbjct: 157 QIGHQGAKWISTMKDLEGLTSLDVSGNSILDQGVQYLSEMSNLTHLDIGSNHVGVKGIES 216
Query: 410 DAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
G+ GL+SLNVS++ + S+G + + + NL SL + + ++
Sbjct: 217 IIGMKGLISLNVSSNDLGSSGAKLISGMSNLTSLNISANRL 257
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 156/349 (44%), Gaps = 36/349 (10%)
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
+ L+SL+I N + D +K +S + L L +S +K G + G+ LT LN+
Sbjct: 1 MQNLKSLSI-VGNGLVDEHLKEISEMKGLTLLDVSENKFGKEGAEKISGMVGLTTLNIND 59
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
+ + + L L + C++ ++G S++ +L LNL N I D+ ++
Sbjct: 60 NYILDEGAKFIGTMKQLTLLKMKYCEIREEGARAISELKNLTFLNLHGNFIGDKGASYIS 119
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE---SIN 330
+ NL LN+ S + EG +++GL NLK L + Q+G G + +S + +LE S++
Sbjct: 120 EMVNLTHLNVGSTQLTAEGARHVSGLKNLKSLLIHTNQIGHQGAKWISTMKDLEGLTSLD 179
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
+S I D ++ L+ +S+L L++ + + G+ ++ + GL L++ + SGA
Sbjct: 180 VSGNSILDQGVQYLSEMSNLTHLDIGSNHVGVKGIESIIGMKGLISLNVSSNDLGSSGAK 239
Query: 391 YLRNFKNLRSLEICGGGLTDAG------------------------------LTGLVSLN 420
+ NL SL I L G + L SLN
Sbjct: 240 LISGMSNLTSLNISANRLLGEGAKFIGEMHNVTILVIRNNDIGDEGAKFICKMKQLKSLN 299
Query: 421 VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSF 469
+RI+S G + +K L SL + + + K + R L NL S
Sbjct: 300 AVYNRISSKGFESISEMKQLTSLDIGYNSIDSKGAKSV--RKLKNLTSL 346
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 9/219 (4%)
Query: 47 KWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLS 106
KW+ + L S+D+SG+ + D G+ +L + SNL LD + G+E + G+
Sbjct: 164 KWISTMKDL-EGLTSLDVSGNSILDQGVQYLSEMSNLTHLDIG-SNHVGVKGIESIIGMK 221
Query: 107 NLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCN 166
L SL+ N+ + + G K +G+ NL L++ R+ G G M ++ + N
Sbjct: 222 GLISLNVSSND-LGSSGAKLISGMSNLTSLNIS-ANRLLGEGAKFIGEMHNVTILVIRNN 279
Query: 167 CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA 226
I D K + + LKSL ++++ G + +++LT L++ + + S+
Sbjct: 280 DIGDEGAKFICKMKQLKSLNAVYNRISSKGFESISEMKQLTSLDIGYNSIDSKGAKSVRK 339
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKV--LNLGFNE 263
L +L LN+ + D+G + IG LK+ L G+ +
Sbjct: 340 LKNLTSLNVRSNMIDDEGLK---AIGQLKIPYLTTGYQQ 375
>gi|46446627|ref|YP_007992.1| hypothetical protein pc0993 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400268|emb|CAF23717.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 478
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 125/237 (52%), Gaps = 11/237 (4%)
Query: 20 LTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD-VTDSGLIHL 77
LT+ A ++C L+ L + D + +AS ++L + L G D VTD+GL HL
Sbjct: 238 LTDAHFSALKECKNLKILTFETCQALTDDGLAHLASL-TALQHLGLRGCDKVTDAGLAHL 296
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLD 137
LQ LD +FC I+D GL HL L+ L L ++ +T G+ L L LD
Sbjct: 297 TSLRALQYLDLSFCRNITDAGLAHLTPLTALQRLLLKKCENLTGAGLAHLTPLKALQYLD 356
Query: 138 LERCTRI-HGGLVNLKGLMKLESLNIKWCNCITD---SDMKPLSGLTNLKSLQISCSKVT 193
L + GL +L+ L+ L+ L++ C +TD + + PL LT+LK I C K+T
Sbjct: 357 LSYWDNLTDDGLAHLRPLVALQHLDLANCYELTDAGLAHLTPLVALTHLK--LIWCHKLT 414
Query: 194 DSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKF 248
D+G+A+L+ L L LNL C +T A L L L +L YLNL+ C +L+D G F
Sbjct: 415 DAGLAHLRPLVALKHLNLSSCRNLTDAGLAHLIPLTALQYLNLSDCRKLTDTGLASF 471
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 131/228 (57%), Gaps = 8/228 (3%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLL 209
LK L+ L + C +TD + L+ LT L+ L + C KVTD+G+A+L L+ L L
Sbjct: 246 LKECKNLKILTFETCQALTDDGLAHLASLTALQHLGLRGCDKVTDAGLAHLTSLRALQYL 305
Query: 210 NLEGCP-VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGF-NEITD 266
+L C +T A L L+ L +L L L +C+ L+ G + + +L+ L+L + + +TD
Sbjct: 306 DLSFCRNITDAGLAHLTPLTALQRLLLKKCENLTGAGLAHLTPLKALQYLDLSYWDNLTD 365
Query: 267 ECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLT 324
+ L HL+ L L+ L+L +C + D GL +LT L L L+L ++ +GL HL L
Sbjct: 366 DGLAHLRPLVALQHLDLANCYELTDAGLAHLTPLVALTHLKLIWCHKLTDAGLAHLRPLV 425
Query: 325 NLESINLSF-TGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTS 370
L+ +NLS ++D L L L++L+ LNL D R++TDTGLA+ +
Sbjct: 426 ALKHLNLSSCRNLTDAGLAHLIPLTALQYLNLSDCRKLTDTGLASFKA 473
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 127/242 (52%), Gaps = 26/242 (10%)
Query: 216 VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLK 273
+T A +L +L L CQ L+DDG + + +L+ L L G +++TD L HL
Sbjct: 238 LTDAHFSALKECKNLKILTFETCQALTDDGLAHLASLTALQHLGLRGCDKVTDAGLAHLT 297
Query: 274 GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQ-VGSSGLRHLSGLTNLESINL 331
L L+ L+L C I D GL +LT L L+ L L + + +GL HL+ L L+ ++L
Sbjct: 298 SLRALQYLDLSFCRNITDAGLAHLTPLTALQRLLLKKCENLTGAGLAHLTPLKALQYLDL 357
Query: 332 SFT-GISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFG-ARITDSG 388
S+ ++D L L L +L+ L+L + ++TD GLA LT L LTHL L ++TD+G
Sbjct: 358 SYWDNLTDDGLAHLRPLVALQHLDLANCYELTDAGLAHLTPLVALTHLKLIWCHKLTDAG 417
Query: 389 AAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSR-ITSAGLRHLKPLKNLRSLTLES 447
A+LR L L LN+S+ R +T AGL HL PL L+ L L
Sbjct: 418 LAHLR------------------PLVALKHLNLSSCRNLTDAGLAHLIPLTALQYLNLSD 459
Query: 448 CK 449
C+
Sbjct: 460 CR 461
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 125/240 (52%), Gaps = 7/240 (2%)
Query: 77 LKDCSN-LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
+K SN + L F+ ++D L+ NL L+F A+T G+ A L L
Sbjct: 220 IKHLSNEIDILHFSNQTYLTDAHFSALKECKNLKILTFETCQALTDDGLAHLASLTALQH 279
Query: 136 LDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVT 193
L L C ++ GL +L L L+ L++ +C ITD+ + L+ LT L+ L + C +T
Sbjct: 280 LGLRGCDKVTDAGLAHLTSLRALQYLDLSFCRNITDAGLAHLTPLTALQRLLLKKCENLT 339
Query: 194 DSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKI 251
+G+A+L L+ L L+L +T L L L +L +L+L C +L+D G + +
Sbjct: 340 GAGLAHLTPLKALQYLDLSYWDNLTDDGLAHLRPLVALQHLDLANCYELTDAGLAHLTPL 399
Query: 252 GSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD 309
+L L L + +++TD L HL+ L L+ LNL SC + D GL +L L L+ L LSD
Sbjct: 400 VALTHLKLIWCHKLTDAGLAHLRPLVALKHLNLSSCRNLTDAGLAHLIPLTALQYLNLSD 459
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 2/137 (1%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
++T +GL HL LQ LD ++ ++D GL HLR L L L +T G+
Sbjct: 337 NLTGAGLAHLTPLKALQYLDLSYWDNLTDDGLAHLRPLVALQHLDLANCYELTDAGLAHL 396
Query: 128 AGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
L+ L L L C ++ GL +L+ L+ L+ LN+ C +TD+ + L LT L+ L
Sbjct: 397 TPLVALTHLKLIWCHKLTDAGLAHLRPLVALKHLNLSSCRNLTDAGLAHLIPLTALQYLN 456
Query: 187 IS-CSKVTDSGIAYLKG 202
+S C K+TD+G+A K
Sbjct: 457 LSDCRKLTDTGLASFKA 473
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD+GL HL+ L+ L+ + C ++D GL HL L+ L L+ +T G+ +F
Sbjct: 413 LTDAGLAHLRPLVALKHLNLSSCRNLTDAGLAHLIPLTALQYLNLSDCRKLTDTGLASFK 472
Query: 129 GLI 131
I
Sbjct: 473 ASI 475
>gi|344170515|emb|CCA82933.1| leucine-rich-repeat type III effector protein (GALA5) [blood
disease bacterium R229]
Length = 533
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 168/370 (45%), Gaps = 10/370 (2%)
Query: 81 SNLQSLDFNFCI-QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE 139
++L LD + C I+ G+ HL L L L+ R + I +G + A L LD+
Sbjct: 139 ASLTELDLSRCRGPITAAGIAHLSHLP-LVRLNVR-DQRIGVEGARLLANHPTLTSLDVS 196
Query: 140 RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY 199
G L G +L +L++ N I K L+ L SL IS + + D G
Sbjct: 197 NGRIGPEGARALAGNTRLTTLSVS-HNRIGAEGAKALAASETLTSLDISENGIGDEGACA 255
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
L KLT LN+ + +L+A +L L++ + D+G + L LN+
Sbjct: 256 LATNTKLTALNVNRNRIGVEGAKALAAGEALTSLDIGGNDIGDEGVRALAANARLTTLNV 315
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
+ + + L L SL +DS IGD G L +L L + + +G +
Sbjct: 316 ERTRVGADGVGALAASKTLTSLRIDSNNIGDAGARALATNTSLTTLHIESNGISPAGAQA 375
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
L+ T L ++NL + GI D + + ++L SL++ ++D G L + LT LD
Sbjct: 376 LAANTTLTTLNLGYNGIGDAGAQAWSANTTLISLSVRRNGLSDAGATTLAASKTLTTLDA 435
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL------TGLVSLNVSNSRITSAGLRH 433
I D+GA L + L +L++ + +AG TGL SL++ N+R+T AG+R
Sbjct: 436 GDNTIRDAGARALAANRTLTTLDVRSNEIENAGARALAANTGLASLDLRNNRVTEAGVRA 495
Query: 434 LKPLKNLRSL 443
L + L SL
Sbjct: 496 LLANRTLSSL 505
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 198/415 (47%), Gaps = 28/415 (6%)
Query: 72 SGLIHLKDCSNLQSLD-FNFCIQISDGGLEHLRGL-SNLTSLSFRR-NNAITAQGMKAFA 128
+GL +K N +L+ +D LRGL ++LT L R ITA G+ +
Sbjct: 106 AGLAGVKRAGNYPALEKLTLIGPFTD---NDLRGLPASLTELDLSRCRGPITAAGIAHLS 162
Query: 129 GLINLVKLDLERCTRI--HGG--LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
L LV+L++ R RI G L N L L+ N + I + L+G T L +
Sbjct: 163 HLP-LVRLNV-RDQRIGVEGARLLANHPTLTSLDVSNGR----IGPEGARALAGNTRLTT 216
Query: 185 LQISCSKVTDSGIAYLKGLQKLTLLNLE--GCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L +S +++ G L + LT L++ G AC +L+ L LN+NR ++
Sbjct: 217 LSVSHNRIGAEGAKALAASETLTSLDISENGIGDEGAC--ALATNTKLTALNVNRNRIGV 274
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNL 302
+G + + +L L++G N+I DE + L L +LN++ +G +G+ L L
Sbjct: 275 EGAKALAAGEALTSLDIGGNDIGDEGVRALAANARLTTLNVERTRVGADGVGALAASKTL 334
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
L + +G +G R L+ T+L ++++ GIS + LA ++L +LNL I D
Sbjct: 335 TSLRIDSNNIGDAGARALATNTSLTTLHIESNGISPAGAQALAANTTLTTLNLGYNGIGD 394
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS---- 418
G A ++ T L L + ++D+GA L K L +L+ + DAG L +
Sbjct: 395 AGAQAWSANTTLISLSVRRNGLSDAGATTLAASKTLTTLDAGDNTIRDAGARALAANRTL 454
Query: 419 --LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKR-LQSRDLPNL-VSF 469
L+V ++ I +AG R L L SL L + +VT ++ L +R L +L VSF
Sbjct: 455 TTLDVRSNEIENAGARALAANTGLASLDLRNNRVTEAGVRALLANRTLSSLGVSF 509
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 126/276 (45%), Gaps = 3/276 (1%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
+L S+D+S + + D G L + L +L+ N +I G + L LTSL N+
Sbjct: 237 TLTSLDISENGIGDEGACALATNTKLTALNVNRN-RIGVEGAKALAAGEALTSLDIGGND 295
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS 177
I +G++A A L L++ER G+ L L SL I N I D+ + L+
Sbjct: 296 -IGDEGVRALAANARLTTLNVERTRVGADGVGALAASKTLTSLRID-SNNIGDAGARALA 353
Query: 178 GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
T+L +L I + ++ +G L LT LNL + A + SA +L L++ R
Sbjct: 354 TNTSLTTLHIESNGISPAGAQALAANTTLTTLNLGYNGIGDAGAQAWSANTTLISLSVRR 413
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
LSD G + +L L+ G N I D L L +L++ S I + G L
Sbjct: 414 NGLSDAGATTLAASKTLTTLDAGDNTIRDAGARALAANRTLTTLDVRSNEIENAGARALA 473
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
L L+L + +V +G+R L L S+ +SF
Sbjct: 474 ANTGLASLDLRNNRVTEAGVRALLANRTLSSLGVSF 509
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 3/230 (1%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
+ G +L S+D+ G+D+ D G+ L + L +L+ ++ G+ L LTSL
Sbjct: 281 AAGEALTSLDIGGNDIGDEGVRALAANARLTTLNVERT-RVGADGVGALAASKTLTSLRI 339
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
NN I G +A A +L L +E G L L +LN+ + N I D+
Sbjct: 340 DSNN-IGDAGARALATNTSLTTLHIESNGISPAGAQALAANTTLTTLNLGY-NGIGDAGA 397
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
+ S T L SL + + ++D+G L + LT L+ + A +L+A +L L
Sbjct: 398 QAWSANTTLISLSVRRNGLSDAGATTLAASKTLTTLDAGDNTIRDAGARALAANRTLTTL 457
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
++ ++ + G + L L+L N +T+ + L L SL +
Sbjct: 458 DVRSNEIENAGARALAANTGLASLDLRNNRVTEAGVRALLANRTLSSLGV 507
>gi|255537779|ref|XP_002509956.1| protein binding protein, putative [Ricinus communis]
gi|223549855|gb|EEF51343.1| protein binding protein, putative [Ricinus communis]
Length = 597
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 174/381 (45%), Gaps = 50/381 (13%)
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDS 171
R NA+ A+ M L L+L C +I L +L G+ L+ L++ +TD+
Sbjct: 70 LRGENAVDAEWMAYLGAFRYLRYLNLADCNKITSSALWSLTGMTSLKELDLSRSVKVTDA 129
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
++ L +++L+ L+I + +T G+A L L L++L+L G PVT L SL L L
Sbjct: 130 GIRHLLSISSLEILRIPETGLTAKGVALLTSLTNLSVLDLGGLPVTDMALSSLQVLTKLE 189
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI--- 288
YL+L +S++G L LNLG+ +T L + +LE LNL +C I
Sbjct: 190 YLDLWGSNISNNGVAVLQLFPKLSFLNLGWTSVT-----RLPSMLSLEYLNLSNCTIESL 244
Query: 289 ----GDEGLVNLT--------------GLCNLKCLELSDTQVGSS---GLRHLSGLTNLE 327
GD LT N++ LS V +S G L + LE
Sbjct: 245 LEGDGDGDKAPLTKVILSGATFPNEAEAFYNIEPRFLSFLDVSNSSLQGFYFLHDMKMLE 304
Query: 328 SINLSFTGISDGSLRKLAGL-SSLKSLNLDARQITDTGLAALTS-LTGLTHLDLFGARIT 385
++LS T + D ++ +A + ++L +LNL ++T GLA L + L +L L A +
Sbjct: 305 HLDLSSTMMGDDAIEAVACIGANLTNLNLSKTRVTSAGLAILAEHVPKLEYLSLSHALVD 364
Query: 386 DSGAAYLRNFKNLRSLEICGGGLTD------------------AGLTGLVSLNVSNSRIT 427
D +Y+ +L+ +++ + GL+GL SLN+ ++++
Sbjct: 365 DFALSYIGMMSSLKVVDLSNTNIKGFIRQMGVETNLIPSLKALQGLSGLQSLNLEHTQVR 424
Query: 428 SAGLRHLKPLKNLRSLTLESC 448
A + + + L L+L+S
Sbjct: 425 DAAVAPVSSFQELSHLSLKSA 445
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 160/380 (42%), Gaps = 93/380 (24%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+T S L L ++L+ LD + ++++D G+ HL +S+L L +TA+G+
Sbjct: 101 ITSSALWSLTGMTSLKELDLSRSVKVTDAGIRHLLSISSLEILRIP-ETGLTAKGVALLT 159
Query: 129 GLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
L NL LDL GGL +TD + L LT L+ L +
Sbjct: 160 SLTNLSVLDL-------GGL------------------PVTDMALSSLQVLTKLEYLDLW 194
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ----LSDDG 244
S ++++G+A L+ KL+ LNL VT L ++ SL YLNL+ C L DG
Sbjct: 195 GSNISNNGVAVLQLFPKLSFLNLGWTSVT-----RLPSMLSLEYLNLSNCTIESLLEGDG 249
Query: 245 --------------------CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
E F I + L + + + L + LE L+L
Sbjct: 250 DGDKAPLTKVILSGATFPNEAEAFYNIEPRFLSFLDVSNSSLQGFYFLHDMKMLEHLDLS 309
Query: 285 SCGIGDEGLVNLTGL-CNLKCLELSDTQVGSSGLRHLS-GLTNLESINLSFTGISD---- 338
S +GD+ + + + NL L LS T+V S+GL L+ + LE ++LS + D
Sbjct: 310 STMMGDDAIEAVACIGANLTNLNLSKTRVTSAGLAILAEHVPKLEYLSLSHALVDDFALS 369
Query: 339 --------------------------------GSLRKLAGLSSLKSLNLDARQITDTGLA 366
SL+ L GLS L+SLNL+ Q+ D +A
Sbjct: 370 YIGMMSSLKVVDLSNTNIKGFIRQMGVETNLIPSLKALQGLSGLQSLNLEHTQVRDAAVA 429
Query: 367 ALTSLTGLTHLDLFGARITD 386
++S L+HL L A + D
Sbjct: 430 PVSSFQELSHLSLKSASLAD 449
>gi|343420998|emb|CCD18943.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 1355
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 146/427 (34%), Positives = 214/427 (50%), Gaps = 74/427 (17%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
+DV+ LI SNL++LD + C I+D + L +SNL +L IT +
Sbjct: 62 TDVSPLSLI-----SNLRTLDLSHCTGITD--VSPLSLISNLRTLDLSHCTGIT--DVPP 112
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITD---------------- 170
+ LI L KLDL CT I + L L +LE+LN+ +C ITD
Sbjct: 113 LSMLIRLEKLDLSGCTGI-TDVSPLSKLSRLETLNLMYCTGITDVSPLSKLSRLETLNLM 171
Query: 171 -----SDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
+D+ PLS ++NL SL +S C+ +TD + L L +L L+L GC + L
Sbjct: 172 YCTGITDVSPLSLMSNLCSLYLSHCTGITD--VPPLSMLIRLEKLDLSGC-TGITDVSPL 228
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNL 283
S L L LNL C D SK+ L+ LNL + ITD + L L+ LE+LNL
Sbjct: 229 SKLSRLETLNLMYCTGITD-VSPLSKLSRLETLNLMYCTGITD--VSPLSKLSRLETLNL 285
Query: 284 DSC-GIGDEGLVNL-TGLCNL---KCLELSDTQ----------------VGSSGLRHLSG 322
C GI D ++L + LC+L C ++D G + + LS
Sbjct: 286 MYCTGITDVSPLSLMSNLCSLYLSHCTGITDVSPLSMLIRLEKLDLSGCTGITDVSPLSK 345
Query: 323 LTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDL- 379
L+ LE++NL + TGI+D S L+ LS L++LNL ITD ++ L+ ++ L L+L
Sbjct: 346 LSRLETLNLMYCTGITDVS--PLSKLSRLETLNLMYCTGITD--VSPLSLMSNLCSLNLM 401
Query: 380 FGARITDSGAAYLRNFKNLRSLEIC-GGGLTD-AGLTGLVSL-NVSNSRITSAGLRHLKP 436
+ ITD + L +F NLR+L++ G+TD + L+ L+ L N+S S I AG+ + P
Sbjct: 402 YCTGITD--VSPLSDFINLRTLDLSFYTGITDVSPLSMLIRLENLSLSNI--AGITDVSP 457
Query: 437 LKNLRSL 443
L L SL
Sbjct: 458 LSKLSSL 464
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 193/378 (51%), Gaps = 37/378 (9%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
L D NL++LD +F I+D + L L L +LS IT + + L +L L
Sbjct: 412 LSDFINLRTLDLSFYTGITD--VSPLSMLIRLENLSLSNIAGIT--DVSPLSKLSSLRTL 467
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDS 195
DL CT I + +L L +LE+LN+ +C IT D+ PLS ++NL SL +S C+ +TD
Sbjct: 468 DLSHCTGI-TDVSSLSKLSRLETLNLMYCTGIT--DVSPLSLMSNLCSLYLSHCTGITD- 523
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 255
+ L L +L L+L GC + LS L L LNL C D SK+ L+
Sbjct: 524 -VPPLSMLIRLEKLDLSGC-TGITDVSPLSKLSRLETLNLMYCTGITD-VSPLSKLSRLE 580
Query: 256 VLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVG 313
LNL + ITD + L ++NL SL L C GI D + L+ L L+ L+LS G
Sbjct: 581 TLNLMYCTGITD--VSPLSLMSNLCSLYLSHCTGITD--VPPLSMLIRLEKLDLSGCT-G 635
Query: 314 SSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSL 371
+ + LS L+ LE++NL + TGI+D S L+ LS L++LNL ITD ++ L+ +
Sbjct: 636 ITDVSPLSKLSRLETLNLMYCTGITDVS--PLSKLSRLETLNLMYCTGITD--VSPLSLI 691
Query: 372 TGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEICG-GGLTDAG----LTGLVSLNVSNSR 425
+ L LDL ITD + L NL SL + G+TD ++ L SL +S+
Sbjct: 692 SNLRTLDLSHCTGITD--VSPLSLMSNLCSLYLSHCTGITDVSPLSLMSNLCSLYLSH-- 747
Query: 426 ITSAGLRHLKPLKNLRSL 443
G+ + PL L L
Sbjct: 748 --CTGITDVPPLSKLSRL 763
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 162/310 (52%), Gaps = 30/310 (9%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
+DV+ LI SNL++LD + C I+D + L +SNL SL IT +
Sbjct: 683 TDVSPLSLI-----SNLRTLDLSHCTGITD--VSPLSLMSNLCSLYLSHCTGIT--DVSP 733
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
+ + NL L L CT I + L L +LE+LN+ +C IT D+ PLS ++NL++L
Sbjct: 734 LSLMSNLCSLYLSHCTGI-TDVPPLSKLSRLETLNLMYCTGIT--DVSPLSLISNLRTLD 790
Query: 187 IS-CSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
+S C+ +TD S ++ + L L L + G +T LS L L LNL C D
Sbjct: 791 LSHCTGITDVSPLSLMSNLCSLYLSHCTG--ITDV--PPLSKLSRLETLNLMYCTGITD- 845
Query: 245 CEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNL 302
SK+ L+ LNL + ITD + L L+ LE+LNL C GI D ++L NL
Sbjct: 846 VSPLSKLSRLETLNLMYCTGITD--VSPLSKLSRLETLNLMYCTGITDVSPLSLMS--NL 901
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLD-ARQI 360
L LS G + + LS L+ LE++NL + TGI+D S L+ +S+L++L+L I
Sbjct: 902 CSLYLSHCT-GITDVSPLSKLSRLETLNLMYCTGITDVS--PLSLISNLRTLDLSHCTGI 958
Query: 361 TDTGLAALTS 370
TD +L S
Sbjct: 959 TDVSPLSLMS 968
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 172/342 (50%), Gaps = 35/342 (10%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLER 140
S L++L+ +C I+D + L +SNL SL IT + + LI L KLDL
Sbjct: 1037 SRLETLNLMYCTGITD--VSPLSLMSNLCSLYLSHCTGIT--DVPPLSMLIRLEKLDLSG 1092
Query: 141 CTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ-ISCSKVTD-SGIA 198
CT I + L L +LE+LN+ +C IT D+ PLS L+ L++L + C+ +TD S ++
Sbjct: 1093 CTGI-TDVSPLSKLSRLETLNLMYCTGIT--DVSPLSKLSRLETLNLMYCTGITDVSPLS 1149
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN 258
+ L L L + G +T LS L L L+L+ C D SK+ L+ LN
Sbjct: 1150 LMSNLCSLYLSHCTG--ITDV--PPLSMLIRLEKLDLSGCTGITD-VSPLSKLSRLETLN 1204
Query: 259 LGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
L + ITD + L L+ LE+LNL C GI D L+ NL+ L+LS G +
Sbjct: 1205 LMYCTGITD--VSPLSKLSRLETLNLMYCTGITDVS--PLSDFINLRTLDLS-FYTGITD 1259
Query: 317 LRHLSGLTNLESINLS-FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLT 375
+ LS L E+++LS GI+D S L+ L L L L TG+ ++ L+ L+
Sbjct: 1260 VSPLSMLIRFENLSLSNIAGITDVS--PLSTLIRLNVLYLSGC----TGITDVSPLSKLS 1313
Query: 376 HLD----LFGARITDSGAAYLRNFKNLRSLEICG-GGLTDAG 412
L+ ++ ITD + L NLR+L++ G+TD
Sbjct: 1314 RLETLNLMYCTGITD--VSPLSLISNLRTLDLSHCTGITDVS 1353
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 199/445 (44%), Gaps = 97/445 (21%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLER 140
S L++L+ +C I+D + L +SNL SL IT + + LI L KLDL
Sbjct: 278 SRLETLNLMYCTGITD--VSPLSLMSNLCSLYLSHCTGIT--DVSPLSMLIRLEKLDLSG 333
Query: 141 CTRIHGGLVNLKGLMKLESLNIKWCNCITD---------------------SDMKPLSGL 179
CT I + L L +LE+LN+ +C ITD +D+ PLS +
Sbjct: 334 CTGI-TDVSPLSKLSRLETLNLMYCTGITDVSPLSKLSRLETLNLMYCTGITDVSPLSLM 392
Query: 180 TNLKSLQ-ISCSKVTD------------------------SGIAYLKGLQKLTLLNLEGC 214
+NL SL + C+ +TD S ++ L L+ L+L N+ G
Sbjct: 393 SNLCSLNLMYCTGITDVSPLSDFINLRTLDLSFYTGITDVSPLSMLIRLENLSLSNIAG- 451
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLK 273
+T LS L SL L+L+ C D SK+ L+ LNL + ITD + L
Sbjct: 452 -ITDV--SPLSKLSSLRTLDLSHCTGITD-VSSLSKLSRLETLNLMYCTGITD--VSPLS 505
Query: 274 GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
++NL SL L C GI D + L+ L L+ L+LS G + + LS L+ LE++NL
Sbjct: 506 LMSNLCSLYLSHCTGITD--VPPLSMLIRLEKLDLSGCT-GITDVSPLSKLSRLETLNLM 562
Query: 333 F-TGISDGSLRKLAGLSSLKSLNL-DARQITD---------------------TGLAALT 369
+ TGI+D S L+ LS L++LNL ITD T + L+
Sbjct: 563 YCTGITDVS--PLSKLSRLETLNLMYCTGITDVSPLSLMSNLCSLYLSHCTGITDVPPLS 620
Query: 370 SLTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEI--CGGGLTDAGLTGLVSLNVSNSRI 426
L L LDL G ITD + L L +L + C G + L+ L L N +
Sbjct: 621 MLIRLEKLDLSGCTGITD--VSPLSKLSRLETLNLMYCTGITDVSPLSKLSRLETLN-LM 677
Query: 427 TSAGLRHLKPL---KNLRSLTLESC 448
G+ + PL NLR+L L C
Sbjct: 678 YCTGITDVSPLSLISNLRTLDLSHC 702
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 156/318 (49%), Gaps = 50/318 (15%)
Query: 132 NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITD--------------------- 170
NL L L CT I + L L +LE+LN+ +C ITD
Sbjct: 3 NLCSLYLSHCTGI-TDVPPLSKLSRLETLNLMYCTGITDVSPLSKLSRLETLNLMYCTGI 61
Query: 171 SDMKPLSGLTNLKSLQIS-CSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG 228
+D+ PLS ++NL++L +S C+ +TD S ++ + L+ L L + G +T LS L
Sbjct: 62 TDVSPLSLISNLRTLDLSHCTGITDVSPLSLISNLRTLDLSHCTG--ITDV--PPLSMLI 117
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC- 286
L L+L+ C D SK+ L+ LNL + ITD + L L+ LE+LNL C
Sbjct: 118 RLEKLDLSGCTGITD-VSPLSKLSRLETLNLMYCTGITD--VSPLSKLSRLETLNLMYCT 174
Query: 287 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS-FTGISDGSLRKLA 345
GI D ++L NL L LS G + + LS L LE ++LS TGI+D S L+
Sbjct: 175 GITDVSPLSLMS--NLCSLYLSHCT-GITDVPPLSMLIRLEKLDLSGCTGITDVS--PLS 229
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLD----LFGARITDSGAAYLRNFKNLRSL 401
LS L++LNL + TG+ ++ L+ L+ L+ ++ ITD + L L +L
Sbjct: 230 KLSRLETLNL----MYCTGITDVSPLSKLSRLETLNLMYCTGITD--VSPLSKLSRLETL 283
Query: 402 EICG-GGLTDAGLTGLVS 418
+ G+TD L+S
Sbjct: 284 NLMYCTGITDVSPLSLMS 301
>gi|317420071|emb|CBN82107.1| Uncharacterized protein [Dicentrarchus labrax]
Length = 889
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 190/410 (46%), Gaps = 47/410 (11%)
Query: 5 DISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDL 64
++++ + N + R L +LE F C LQ L YP ++ + + + ++L + L
Sbjct: 469 ELAELLLNHMSRERLLRPRTLELFFGCPLQKFVLNCYPYSTNELLRQLRA-FTALKHLSL 527
Query: 65 SGSD-VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
S +TDSGL + LQ L+ C +++D L+H+ GL +L LS + +T G
Sbjct: 528 VNSPLITDSGLSIFSSLAKLQYLNLASCSKLTDSCLQHITGLKSLCFLSLDQTK-VTDAG 586
Query: 124 MKAF--AGLINLVKLDLERCTRIHGGLVNLKG-LMKLESLNIKWCNCITDSDMKPLSGLT 180
M + + L +L L + LV L + +L L+IK D+ L+ L+
Sbjct: 587 MVLYLQSAPSCLSQLSLNQTAVTEASLVVLPTCVPQLRLLSIKQTKV---KDVSALARLS 643
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR--- 237
NL++L + + VT+S + +L L+ L+L G PV D AL + L L +
Sbjct: 644 NLQTLNLDVTGVTESSLEHLSSHPTLSSLSLAGIPVA----DGNQALQIISDLRLTQLTL 699
Query: 238 ----------------------------CQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
Q++D G + S + LK L+L ++TD L
Sbjct: 700 PGRHTVTDSGLSFLSRLSLLLELDLTDYTQVTDQGVSQLSTMTRLKKLSLSNTQVTDAGL 759
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNL-TGLCNLKCLELSDTQVGSSGLRH-LSGLTNLE 327
L+GL L+ L LD + G+ +L T L +L+ L L+ TQVG + +R + L
Sbjct: 760 PSLRGLQELQELCLDRTAVTSRGVADLITCLPHLQVLGLASTQVGDTVVRRGVIRCNQLV 819
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
+NLS T I+D L+ L + L +NLD ++ G+A L S T ++ +
Sbjct: 820 KLNLSRTRITDHGLKCLKHM-HLAQVNLDGTGVSLIGIANLLSFTNISSI 868
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 149/338 (44%), Gaps = 71/338 (21%)
Query: 166 NCI---TDSDMKPLSGLTNLKSLQISCSK-VTDSGIAYLKGLQKLTLLNLEGC-PVTAAC 220
NC T+ ++ L T LK L + S +TDSG++ L KL LNL C +T +C
Sbjct: 503 NCYPYSTNELLRQLRAFTALKHLSLVNSPLITDSGLSIFSSLAKLQYLNLASCSKLTDSC 562
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKF--SKIGSLKVLNLGFNEITDECLVHLKG-LTN 277
L ++ L SL +L+L++ +++D G + S L L+L +T+ LV L +
Sbjct: 563 LQHITGLKSLCFLSLDQTKVTDAGMVLYLQSAPSCLSQLSLNQTAVTEASLVVLPTCVPQ 622
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
L L++ + D + L L NL+ L L T V S L HLS L S++L+ ++
Sbjct: 623 LRLLSIKQTKVKD--VSALARLSNLQTLNLDVTGVTESSLEHLSSHPTLSSLSLAGIPVA 680
Query: 338 DGSLRKLAGLSSLKSLNL----------------------------DARQITDTGLAALT 369
DG+ + L +S L+ L D Q+TD G++ L+
Sbjct: 681 DGN-QALQIISDLRLTQLTLPGRHTVTDSGLSFLSRLSLLLELDLTDYTQVTDQGVSQLS 739
Query: 370 SLTGLTHLDLFGARITDSGAAYLRNFKNLRS----------------------LEICGGG 407
++T L L L ++TD+G LR + L+ L++ G
Sbjct: 740 TMTRLKKLSLSNTQVTDAGLPSLRGLQELQELCLDRTAVTSRGVADLITCLPHLQVLGLA 799
Query: 408 LTDAGLT----------GLVSLNVSNSRITSAGLRHLK 435
T G T LV LN+S +RIT GL+ LK
Sbjct: 800 STQVGDTVVRRGVIRCNQLVKLNLSRTRITDHGLKCLK 837
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 118/244 (48%), Gaps = 15/244 (6%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGL--INLV 134
L SNLQ+L+ + +++ LEHL L+SLS A G +A + + L
Sbjct: 639 LARLSNLQTLNLD-VTGVTESSLEHLSSHPTLSSLSL--AGIPVADGNQALQIISDLRLT 695
Query: 135 KLDLE-RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
+L L R T GL L L L L++ +TD + LS +T LK L +S ++VT
Sbjct: 696 QLTLPGRHTVTDSGLSFLSRLSLLLELDLTDYTQVTDQGVSQLSTMTRLKKLSLSNTQVT 755
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTA-ACLDSLSALGSLFYLNLNRCQLSDDGCEK-FSKI 251
D+G+ L+GLQ+L L L+ VT+ D ++ L L L L Q+ D + +
Sbjct: 756 DAGLPSLRGLQELQELCLDRTAVTSRGVADLITCLPHLQVLGLASTQVGDTVVRRGVIRC 815
Query: 252 GSLKVLNLGFNEITD---ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
L LNL ITD +CL H+ +L +NLD G+ G+ NL N+ + S
Sbjct: 816 NQLVKLNLSRTRITDHGLKCLKHM----HLAQVNLDGTGVSLIGIANLLSFTNISSIRAS 871
Query: 309 DTQV 312
+T+
Sbjct: 872 NTRT 875
>gi|217074836|gb|ACJ85778.1| unknown [Medicago truncatula]
Length = 81
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 56/62 (90%)
Query: 411 AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFR 470
AGLT LVSLN+SN+RITSAGL+HLK LKNLRSLTLESCKVTANDIK+ + LPNLVSFR
Sbjct: 20 AGLTALVSLNLSNTRITSAGLQHLKTLKNLRSLTLESCKVTANDIKKFKLIHLPNLVSFR 79
Query: 471 PE 472
PE
Sbjct: 80 PE 81
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
LN+ + +TD ++ ++GLT L SL +S +++T +G+ +LK L+ L L LE C VTA
Sbjct: 3 LNLSQNSNLTDKTVELIAGLTALVSLNLSNTRITSAGLQHLKTLKNLRSLTLESCKVTA 61
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 36 LCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC-IQI 94
L L Q + DK +++IA ++L+S++LS + +T +GL HLK NL+SL C +
Sbjct: 3 LNLSQNSNLTDKTVELIAGL-TALVSLNLSNTRITSAGLQHLKTLKNLRSLTLESCKVTA 61
Query: 95 SDGGLEHLRGLSNLTSLSFR 114
+D L L NL +SFR
Sbjct: 62 NDIKKFKLIHLPNL--VSFR 79
>gi|87309359|ref|ZP_01091495.1| hypothetical protein DSM3645_22189 [Blastopirellula marina DSM
3645]
gi|87287998|gb|EAQ79896.1| hypothetical protein DSM3645_22189 [Blastopirellula marina DSM
3645]
Length = 351
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 4/274 (1%)
Query: 142 TRIHGGLVNLKGL---MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIA 198
+R+ V+ +GL + L L+++ +TD L+ LT L+SL + +T +
Sbjct: 58 SRVVATDVDFRGLGEAVTLRKLSLQDVG-MTDESASELAPLTKLQSLDMRGVSITGEALQ 116
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN 258
L L +L L G P+ A L L+ L L L L+ S G E LK L
Sbjct: 117 SLGQLTELERLLFRGQPIRDADLAQLAPLTKLKVLGLDDTDASAGGLEHLQNAHDLKELY 176
Query: 259 LGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
L DE L L L L L + G+ L + +L+ L++S+T+V +G
Sbjct: 177 LFNTPTVDEELAVLTKFPALAKLRLRGSDVTGSGMAELAKIGSLEDLDVSETKVDDAGAA 236
Query: 319 HLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 378
++ L L +NL T ++D SL LA L++L+ LNLDA +TD LA L ++ L L
Sbjct: 237 EIAKLPKLTDLNLWKTKVTDASLPDLAKLTTLERLNLDANDLTDANLALLAAMPNLKWLH 296
Query: 379 LFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
L +TD+G L K+L +L + +TD G
Sbjct: 297 LGSTSVTDAGILELAKSKSLETLIVTRTKVTDDG 330
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 135/286 (47%), Gaps = 5/286 (1%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S + + +DLS TD L + L+ L + ++D L L+ L SL
Sbjct: 47 SSSKAPIGMDLSRVVATDVDFRGLGEAVTLRKLSLQ-DVGMTDESASELAPLTKLQSLDM 105
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGG-LVNLKGLMKLESLNIKWCNCITDSD 172
R +IT + +++ L L +L L R I L L L KL+ L + + +
Sbjct: 106 R-GVSITGEALQSLGQLTELERL-LFRGQPIRDADLAQLAPLTKLKVLGLDDTDA-SAGG 162
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
++ L +LK L + + D +A L L L L G VT + + L+ +GSL
Sbjct: 163 LEHLQNAHDLKELYLFNTPTVDEELAVLTKFPALAKLRLRGSDVTGSGMAELAKIGSLED 222
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L+++ ++ D G + +K+ L LNL ++TD L L LT LE LNLD+ + D
Sbjct: 223 LDVSETKVDDAGAAEIAKLPKLTDLNLWKTKVTDASLPDLAKLTTLERLNLDANDLTDAN 282
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
L L + NLK L L T V +G+ L+ +LE++ ++ T ++D
Sbjct: 283 LALLAAMPNLKWLHLGSTSVTDAGILELAKSKSLETLIVTRTKVTD 328
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 113/249 (45%), Gaps = 7/249 (2%)
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
+L L+L ++D+ + + + L+ L++ IT E L L LT LE L I
Sbjct: 75 TLRKLSLQDVGMTDESASELAPLTKLQSLDMRGVSITGEALQSLGQLTELERLLFRGQPI 134
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
D L L L LK L L DT + GL HL +L+ + L T D L L
Sbjct: 135 RDADLAQLAPLTKLKVLGLDDTDASAGGLEHLQNAHDLKELYLFNTPTVDEELAVLTKFP 194
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL 408
+L L L +T +G+A L + L LD+ ++ D+GAA + L L + +
Sbjct: 195 ALAKLRLRGSDVTGSGMAELAKIGSLEDLDVSETKVDDAGAAEIAKLPKLTDLNLWKTKV 254
Query: 409 TDAGL------TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL-QSR 461
TDA L T L LN+ + +T A L L + NL+ L L S VT I L +S+
Sbjct: 255 TDASLPDLAKLTTLERLNLDANDLTDANLALLAAMPNLKWLHLGSTSVTDAGILELAKSK 314
Query: 462 DLPNLVSFR 470
L L+ R
Sbjct: 315 SLETLIVTR 323
>gi|168701675|ref|ZP_02733952.1| hypothetical protein GobsU_19277 [Gemmata obscuriglobus UQM 2246]
Length = 407
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 111/191 (58%), Gaps = 8/191 (4%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGI--------AYLKGLQKLTLLNLEGCPVTAA 219
+TD+ +K L+ L L +L +S ++VTD+G+ GL+ LT L+L VT A
Sbjct: 46 VTDTGLKELAALKGLTTLDLSYTEVTDAGVKALAALKALTALGLKGLTTLDLTFTRVTDA 105
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
+ +L+AL +L L+L+ ++D+G ++ + +G+L L LG +TD + L L L
Sbjct: 106 GVKALAALKALTTLDLSHTLVTDEGLKELAALGALNTLGLGGTSVTDAGVKELAALKGLT 165
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
+L+L S G+ D G L+GL L L +S T V +G++ L+ L NL + L+ TG++D
Sbjct: 166 ALDLGSMGVTDAGAKELSGLTGLTALGMSFTGVTDAGVKELAALKNLTHLELAATGVTDA 225
Query: 340 SLRKLAGLSSL 350
+++LA L SL
Sbjct: 226 GVKELAALKSL 236
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 107/199 (53%), Gaps = 14/199 (7%)
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-----------VHLKGLTNLESL 281
++L+ +++D G ++ + + L L+L + E+TD + + LKGLT +L
Sbjct: 39 VSLSFTRVTDTGLKELAALKGLTTLDLSYTEVTDAGVKALAALKALTALGLKGLT---TL 95
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 341
+L + D G+ L L L L+LS T V GL+ L+ L L ++ L T ++D +
Sbjct: 96 DLTFTRVTDAGVKALAALKALTTLDLSHTLVTDEGLKELAALGALNTLGLGGTSVTDAGV 155
Query: 342 RKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
++LA L L +L+L + +TD G L+ LTGLT L + +TD+G L KNL L
Sbjct: 156 KELAALKGLTALDLGSMGVTDAGAKELSGLTGLTALGMSFTGVTDAGVKELAALKNLTHL 215
Query: 402 EICGGGLTDAGLTGLVSLN 420
E+ G+TDAG+ L +L
Sbjct: 216 ELAATGVTDAGVKELAALK 234
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 26/212 (12%)
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC--------NLKCLELS 308
++L F +TD L L L L +L+L + D G+ L L L L+L+
Sbjct: 39 VSLSFTRVTDTGLKELAALKGLTTLDLSYTEVTDAGVKALAALKALTALGLKGLTTLDLT 98
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
T+V +G++ L+ L L +++LS T ++D L++LA L +L +L L +TD G+ L
Sbjct: 99 FTRVTDAGVKALAALKALTTLDLSHTLVTDEGLKELAALGALNTLGLGGTSVTDAGVKEL 158
Query: 369 TSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITS 428
+L GLT LDL +TD+GA L +GLTGL +L +S + +T
Sbjct: 159 AALKGLTALDLGSMGVTDAGAKEL------------------SGLTGLTALGMSFTGVTD 200
Query: 429 AGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
AG++ L LKNL L L + VT +K L +
Sbjct: 201 AGVKELAALKNLTHLELAATGVTDAGVKELAA 232
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 11/209 (5%)
Query: 204 QKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIG--------SLK 255
+ +T ++L VT L L+AL L L+L+ +++D G + + + L
Sbjct: 34 RPVTKVSLSFTRVTDTGLKELAALKGLTTLDLSYTEVTDAGVKALAALKALTALGLKGLT 93
Query: 256 VLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSS 315
L+L F +TD + L L L +L+L + DEGL L L L L L T V +
Sbjct: 94 TLDLTFTRVTDAGVKALAALKALTTLDLSHTLVTDEGLKELAALGALNTLGLGGTSVTDA 153
Query: 316 GLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLT 375
G++ L+ L L +++L G++D ++L+GL+ L +L + +TD G+ L +L LT
Sbjct: 154 GVKELAALKGLTALDLGSMGVTDAGAKELSGLTGLTALGMSFTGVTDAGVKELAALKNLT 213
Query: 376 HLDLFGARITDSGAAYLRNFKNLRSLEIC 404
HL+L +TD+G ++ L+SL +C
Sbjct: 214 HLELAATGVTDAG---VKELAALKSLVLC 239
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 17/210 (8%)
Query: 56 GSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLE-----------HLRG 104
G + V LS + VTD+GL L L +LD ++ +++D G++ L+G
Sbjct: 33 GRPVTKVSLSFTRVTDTGLKELAALKGLTTLDLSY-TEVTDAGVKALAALKALTALGLKG 91
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW 164
L+ L L+F R +T G+KA A L L LDL GL L L L +L +
Sbjct: 92 LTTL-DLTFTR---VTDAGVKALAALKALTTLDLSHTLVTDEGLKELAALGALNTLGLG- 146
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
+TD+ +K L+ L L +L + VTD+G L GL LT L + VT A + L
Sbjct: 147 GTSVTDAGVKELAALKGLTALDLGSMGVTDAGAKELSGLTGLTALGMSFTGVTDAGVKEL 206
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSL 254
+AL +L +L L ++D G ++ + + SL
Sbjct: 207 AALKNLTHLELAATGVTDAGVKELAALKSL 236
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 16/196 (8%)
Query: 59 LLSVDLSGSDVTDSGL--------IHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTS 110
L ++DLS ++VTD+G+ + L +LD F +++D G++ L L LT+
Sbjct: 60 LTTLDLSYTEVTDAGVKALAALKALTALGLKGLTTLDLTF-TRVTDAGVKALAALKALTT 118
Query: 111 LSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITD 170
L + +T +G+K A L L L L + G+ L L L +L++ +TD
Sbjct: 119 LDLS-HTLVTDEGLKELAALGALNTLGLGGTSVTDAGVKELAALKGLTALDLG-SMGVTD 176
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
+ K LSGLT L +L +S + VTD+G+ L L+ LT L L VT A + L+AL SL
Sbjct: 177 AGAKELSGLTGLTALGMSFTGVTDAGVKELAALKNLTHLELAATGVTDAGVKELAALKSL 236
Query: 231 FYLNLNRCQLSDDGCE 246
CQ ++ GC
Sbjct: 237 VL-----CQANELGCH 247
>gi|254416357|ref|ZP_05030110.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196176795|gb|EDX71806.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 438
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 184/388 (47%), Gaps = 50/388 (12%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
+ L G SNLT L + +N+IT + AGL NL L LE + ++ L +L
Sbjct: 66 ISPLAGFSNLTKL-YLESNSIT--DISPLAGLSNLTVLSLE-----SNSITDVSPLAELS 117
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
+L + N + +D+ PL+GL+NL L ++ + +TD I L GL LT+L L+ +T
Sbjct: 118 NLTKLYLNNNSITDVSPLAGLSNLTKLYLNNNSITD--IGPLAGLSNLTVLYLDSNSITD 175
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
+ L+ L +L LNL ++D +++ +L + L N IT+ + L L+NL
Sbjct: 176 --VSPLAGLSNLTVLNLGNNSITD--VNPLAELSNLTKVFLTNNSITN--ISPLAELSNL 229
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS-SGLRHLSGLTNLESINLSFTGIS 337
L L S I D + L GL NL L L + + S L LS LT L N F I
Sbjct: 230 TVLYLYSNSITD--ISPLAGLSNLTVLNLDNNSITDISPLAGLSNLTELSLGNADFFIIG 287
Query: 338 DGS---LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
+ S + LAGLS+L LNL ITD ++ L L+ LT L L ITD + L
Sbjct: 288 ENSITDISPLAGLSNLTVLNLGRNSITD--VSPLAELSNLTKLSLGSNSITD--ISPLAG 343
Query: 395 FKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL----- 445
NL L + +TD AGL+ L L +S++ IT A L L NLR L L
Sbjct: 344 LSNLTKLYLDSNSITDVSPLAGLSNLTELFLSSNSITDA--SPLAQLTNLRRLFLGDNLI 401
Query: 446 --ESCKVTANDIKRLQSRDLPNLVSFRP 471
+C V+ P + SF P
Sbjct: 402 AQPTCPVSP-----------PGVCSFSP 418
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 150/306 (49%), Gaps = 34/306 (11%)
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
W N ITD + PL+G +NL L + + +TD I+ L GL LT+L+LE +T +
Sbjct: 59 WDNSITD--ISPLAGFSNLTKLYLESNSITD--ISPLAGLSNLTVLSLESNSITD--VSP 112
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
L+ L +L L LN ++D + + +L L L N ITD + L GL+NL L L
Sbjct: 113 LAELSNLTKLYLNNNSITD--VSPLAGLSNLTKLYLNNNSITD--IGPLAGLSNLTVLYL 168
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGS-SGLRHLSGLTNLESINLSFTGISDGSLR 342
DS I D + L GL NL L L + + + L LS LT + N S T IS
Sbjct: 169 DSNSITD--VSPLAGLSNLTVLNLGNNSITDVNPLAELSNLTKVFLTNNSITNIS----- 221
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD-SGAAYLRNFKNLR-- 399
LA LS+L L L + ITD ++ L L+ LT L+L ITD S A L N L
Sbjct: 222 PLAELSNLTVLYLYSNSITD--ISPLAGLSNLTVLNLDNNSITDISPLAGLSNLTELSLG 279
Query: 400 --SLEICG-GGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
I G +TD AGL+ L LN+ + IT + L L NL L+L S +T
Sbjct: 280 NADFFIIGENSITDISPLAGLSNLTVLNLGRNSIT--DVSPLAELSNLTKLSLGSNSIT- 336
Query: 453 NDIKRL 458
DI L
Sbjct: 337 -DISPL 341
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 143/291 (49%), Gaps = 34/291 (11%)
Query: 45 NDKWMDVIASQG-SSLLSVDLSGSDVTDSGLIHLKDCSNLQ--SLDFNFCIQISDGGLEH 101
N+ DV G S+L + L+ + +TD G L SNL LD N +S
Sbjct: 126 NNSITDVSPLAGLSNLTKLYLNNNSITDIG--PLAGLSNLTVLYLDSNSITDVS-----P 178
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLN 161
L GLSNLT L+ NN+IT + A L NL K+ L + + N+ L +L +L
Sbjct: 179 LAGLSNLTVLNLG-NNSIT--DVNPLAELSNLTKVFLT-----NNSITNISPLAELSNLT 230
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV----- 216
+ + + +D+ PL+GL+NL L + + +TD I+ L GL LT L+L
Sbjct: 231 VLYLYSNSITDISPLAGLSNLTVLNLDNNSITD--ISPLAGLSNLTELSLGNADFFIIGE 288
Query: 217 -TAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
+ + L+ L +L LNL R ++D +++ +L L+LG N ITD + L GL
Sbjct: 289 NSITDISPLAGLSNLTVLNLGRNSITD--VSPLAELSNLTKLSLGSNSITD--ISPLAGL 344
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
+NL L LDS I D + L GL NL L LS + + L+ LTNL
Sbjct: 345 SNLTKLYLDSNSITD--VSPLAGLSNLTELFLSSNSITDA--SPLAQLTNL 391
>gi|87307769|ref|ZP_01089912.1| serine/threonine protein kinase [Blastopirellula marina DSM 3645]
gi|87289383|gb|EAQ81274.1| serine/threonine protein kinase [Blastopirellula marina DSM 3645]
Length = 1283
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 191/456 (41%), Gaps = 39/456 (8%)
Query: 9 QIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD 68
++ N ++++ +T AF DC LQ + L P V D+W+ + + + + S +
Sbjct: 855 KVTNLMLWATPITREDFLAFADCKLQGVLLSYTP-VKDEWLTHL-THPEAFTDLGFSFTQ 912
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+ D GL ++ + +L +I+D GL + L S+ R+ ++T G+ F
Sbjct: 913 IGDEGLAAFQNSKKIVNLHLEHT-KITDVGLAYFHDCRELKSIRLRQT-SVTDAGVLPFK 970
Query: 129 GLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
L +L L + L+ L + I W D D K S
Sbjct: 971 HCSKLEELSLATTNVTAAAVEELRA--ALPNCKITW-----DGDAKTES----------P 1013
Query: 189 CSKVTDS-GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCE 246
K +D+ Y+ + + LN G + +A + A L ++N N C+ +DDG
Sbjct: 1014 EEKNSDNLAAKYVLSIGGIVRLNGGGTDIHSAT-ELPPAPFRLTHVNFNLCKKATDDGLA 1072
Query: 247 KFSKIGSLKVLNLGFNE-ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
F+ + L + F +T L + K +L+ LN + GL L NL+ +
Sbjct: 1073 VFANCKDIVSLTMRFTPNVTGRGLAYFKNCKDLKELNCNYSPYVSAGLPLLANCKNLEKI 1132
Query: 306 ELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL 365
L + LR ++ L L +NL T + D L SL LN + +I D GL
Sbjct: 1133 SLMGVKFTREELRPIAELP-LTFVNLGATPVQDEWLSDFTNAESLTYLNFASTKIGDKGL 1191
Query: 366 AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL------TGLVSL 419
AA + L L L ITD G AY + ++L L++ + D GL L +
Sbjct: 1192 AAFQNCNALQQLSLQDTNITDEGLAYFYDCRDLEILQLQNTKVRDFGLLRFKSCQKLKQV 1251
Query: 420 NVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 455
+S +R+T+AG+ LK +L C V +D+
Sbjct: 1252 EISKTRVTAAGVDELK-------KSLPYCTVVWDDV 1280
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 154/388 (39%), Gaps = 32/388 (8%)
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC 141
L+S+ FN I+ ++ ++ +L+ I+A G+K F NL L L C
Sbjct: 781 KLKSVFFNQAIECTNEEFAVFADCQDIEALTLWAVPTISADGLKHFRRCRNLKVLALPHC 840
Query: 142 TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLK 201
I GL +L K+ +L + W IT D + L+ + +S + V D + +L
Sbjct: 841 DNIGSGLSHLSECDKVTNLML-WATPITREDFLAFAD-CKLQGVLLSYTPVKDEWLTHLT 898
Query: 202 GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF 261
+ T L + L + + L+L +++D G F LK + L
Sbjct: 899 HPEAFTDLGFSFTQIGDEGLAAFQNSKKIVNLHLEHTKITDVGLAYFHDCRELKSIRLRQ 958
Query: 262 NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL-TGLCNLKCLELSDTQVGSS----- 315
+TD ++ K + LE L+L + + + L L N K D + S
Sbjct: 959 TSVTDAGVLPFKHCSKLEELSLATTNVTAAAVEELRAALPNCKITWDGDAKTESPEEKNS 1018
Query: 316 ---GLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSL 371
+++ + + +N T I + A L +N + ++ TD GLA +
Sbjct: 1019 DNLAAKYVLSIGGIVRLNGGGTDIHSATELPPAPFR-LTHVNFNLCKKATDDGLAVFANC 1077
Query: 372 TGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAG 430
+ L + F +T G AY +N K+L+ L N + S SAG
Sbjct: 1078 KDIVSLTMRFTPNVTGRGLAYFKNCKDLKEL------------------NCNYSPYVSAG 1119
Query: 431 LRHLKPLKNLRSLTLESCKVTANDIKRL 458
L L KNL ++L K T +++ +
Sbjct: 1120 LPLLANCKNLEKISLMGVKFTREELRPI 1147
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 108/246 (43%), Gaps = 40/246 (16%)
Query: 253 SLKVLNLGFN---EITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELS 308
+K+ ++ FN E T+E ++E+L L + I +GL + NLK L L
Sbjct: 779 PVKLKSVFFNQAIECTNEEFAVFADCQDIEALTLWAVPTISADGLKHFRRCRNLKVLALP 838
Query: 309 DTQVGSSGLRHLS---GLTNL--------------------ESINLSFTGISDGSLRKLA 345
SGL HLS +TNL + + LS+T + D L L
Sbjct: 839 HCDNIGSGLSHLSECDKVTNLMLWATPITREDFLAFADCKLQGVLLSYTPVKDEWLTHLT 898
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
+ L QI D GLAA + + +L L +ITD G AY + + L+S+ +
Sbjct: 899 HPEAFTDLGFSFTQIGDEGLAAFQNSKKIVNLHLEHTKITDVGLAYFHDCRELKSIRLRQ 958
Query: 406 GGLTDAGL------TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
+TDAG+ + L L+++ + +T+A + L+ L +CK+T + + +
Sbjct: 959 TSVTDAGVLPFKHCSKLEELSLATTNVTAAAVEELR-------AALPNCKITWDGDAKTE 1011
Query: 460 SRDLPN 465
S + N
Sbjct: 1012 SPEEKN 1017
>gi|347547841|ref|YP_004854169.1| putative internalin A [Listeria ivanovii subsp. ivanovii PAM 55]
gi|346980912|emb|CBW84831.1| Putative internalin A [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 798
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 203/418 (48%), Gaps = 44/418 (10%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+ ++ DL + V+D+ + D + SL+ + S G+E+L +N+T L F N
Sbjct: 54 AEVVKTDLGKATVSDT--VTQTDLDGITSLEADRKGITSIAGVEYL---NNVTQLDFSYN 108
Query: 117 NAITAQGMKAFAGLINLVKL-DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+ L NL KL L L L+ L L L + + N ITD + P
Sbjct: 109 Q------ITDLTPLANLTKLTSLVMNNNQIADLTPLQNLTSLTELTL-FYNKITD--VAP 159
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD--SLSALGSLFYL 233
L+ LTNL +L I TD+ I+ + + LT NLEG + D L+ L L L
Sbjct: 160 LANLTNLTNLAI-----TDNEISDVTPIGNLT--NLEGLSIGNKVTDIKPLANLTKLERL 212
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
NL+R +++D +K+ +L+ L+L N+ +D L L LTNL L+L S + D G
Sbjct: 213 NLSRNKITD--ISPVAKLINLQSLSLDNNQFSD--LTPLGILTNLTELSLYSNHLSDIG- 267
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
L L NLK L L D Q+ S L +S LTNL +NLS ISD L+ ++ L++L L
Sbjct: 268 -TLASLTNLKKLNLMDNQI--SNLAPISNLTNLTDLNLSTNQISD--LKPISNLTNLTVL 322
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD--- 410
+ Q+ D ++ ++SL L L L+ +I+D + L N L+ L ++D
Sbjct: 323 QVPTNQLED--ISPISSLPNLEFLTLYTNQISD--LSPLENLTKLKQLFFYDNKVSDVSP 378
Query: 411 -AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLV 467
A LT L L+ ++I + L L L L L L+ KVT+ +K + +PN V
Sbjct: 379 IANLTSLQELSAGTNQI--SDLTPLAKLTRLTQLGLDKQKVTSQPVKYQSNLVVPNAV 434
>gi|254416421|ref|ZP_05030174.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196176859|gb|EDX71870.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 477
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 214/407 (52%), Gaps = 44/407 (10%)
Query: 73 GLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLS--FRRNNAITAQGMKAFAGL 130
G +KD S L L + + + + + LS LTSL+ + NN IT +
Sbjct: 84 GYNQIKDVSPLSGLTNLTVLNLWNNQITDISSLSGLTSLTELYLNNNQITDISPLSGLTN 143
Query: 131 INLVKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
+ ++ L+ + T I GL +L GL+ L IK D+ PLSGLTNL L ++
Sbjct: 144 LTVLNLNNNQITDISPLSGLTSLTGLI-LGGNQIK--------DVSPLSGLTNLTVLNLN 194
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
+++TD I+ L GL LT+L L +T + SLS L SL L L+ Q++D
Sbjct: 195 NNQITD--ISPLSGLTSLTVLILYSNQITD--ISSLSGLTSLTVLILSDNQITD--ISPL 248
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
S + +L L L N+ITD + L GLTNL++L L++ I D + L+GL NL L L+
Sbjct: 249 SGLTNLDALYLNNNQITD--ISPLSGLTNLDALYLNNNQITD--ISPLSGLTNLDALYLN 304
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
+ Q+ + + LSGLTNL+++ L+ I+D SL L+GL++L +L L++ QITD ++ L
Sbjct: 305 NNQI--TDISPLSGLTNLDALYLNSNQITDISL--LSGLTNLDALYLNSNQITD--ISPL 358
Query: 369 TSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNS 424
LT L +L L +ITD + L NL L + +TD +GLT L L ++++
Sbjct: 359 LELTNLNYLILDNNQITD--ISPLSGLTNLTILILDNNQITDISPLSGLTNLGGLILNSN 416
Query: 425 RITSAGLRHLKPLKNLRSLTLESCKVT-------ANDIKRLQSRDLP 464
+IT L L NL L L S ++T +++RL +D P
Sbjct: 417 QITDV--SPLSGLTNLTVLNLNSNQITDVSPLSGLTNLRRLHLKDNP 461
>gi|290984863|ref|XP_002675146.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284088740|gb|EFC42402.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 458
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 156/318 (49%), Gaps = 2/318 (0%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
+I + G + + L LT+L+ +N I +G+K F+ L +L ++ + G +
Sbjct: 135 KIRNEGAKCIPQLKQLTNLNVE-DNKIGNEGVKCFSELKHLTNFNIRNNKIMDEGAKYIS 193
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
+ +L +NI N I + + +S + L +L I +++ D G ++ ++ LT L++
Sbjct: 194 QMSQLTCMNI-GNNNIGEPGAEYISQMKQLTNLNIHGNRIGDKGARHISEMEGLTHLDIG 252
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
+ LS + L YL + +L ++G + S++ L +L +G N I ++
Sbjct: 253 YNNLGNLGSQYLSQMKKLTYLFIEGNRLDENGAKFVSELKQLTILCIGANGIGPNGARYI 312
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
+ L L++ IG+EG +L + L L + ++GS G + +S + L S+++
Sbjct: 313 TEMKQLTDLSIGGAKIGEEGARHLKTMNQLTNLNIGYNRLGSIGAKFISEMKQLTSLDIF 372
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
+ I D + ++ L +L+ L++ ITD G ++ L LTHL + ++D GA Y+
Sbjct: 373 YNNIEDEGAKHISELKNLRKLDIGRNNITDEGAKYVSQLNQLTHLSITYNNLSDEGAKYI 432
Query: 393 RNFKNLRSLEICGGGLTD 410
L L+I G ++D
Sbjct: 433 NTMTQLTKLDIGGNAISD 450
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 165/372 (44%), Gaps = 37/372 (9%)
Query: 81 SNLQSLDFNFCIQISD-GGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE 139
N+QSL+ N D LE + L+NLT S RN +G K L L L++E
Sbjct: 102 QNIQSLNVNQYFNTFDCHVLEFMGSLNNLTIRSKIRN-----EGAKCIPQLKQLTNLNVE 156
Query: 140 RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY 199
N I + +K S L +L + I +K+ D G Y
Sbjct: 157 D-------------------------NKIGNEGVKCFSELKHLTNFNIRNNKIMDEGAKY 191
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
+ + +LT +N+ + + +S + L LN++ ++ D G S++ L L++
Sbjct: 192 ISQMSQLTCMNIGNNNIGEPGAEYISQMKQLTNLNIHGNRIGDKGARHISEMEGLTHLDI 251
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
G+N + + +L + L L ++ + + G ++ L L L + +G +G R+
Sbjct: 252 GYNNLGNLGSQYLSQMKKLTYLFIEGNRLDENGAKFVSELKQLTILCIGANGIGPNGARY 311
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
++ + L +++ I + R L ++ L +LN+ ++ G ++ + LT LD+
Sbjct: 312 ITEMKQLTDLSIGGAKIGEEGARHLKTMNQLTNLNIGYNRLGSIGAKFISEMKQLTSLDI 371
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRH 433
F I D GA ++ KNLR L+I +TD G L L L+++ + ++ G ++
Sbjct: 372 FYNNIEDEGAKHISELKNLRKLDIGRNNITDEGAKYVSQLNQLTHLSITYNNLSDEGAKY 431
Query: 434 LKPLKNLRSLTL 445
+ + L L +
Sbjct: 432 INTMTQLTKLDI 443
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 146/305 (47%), Gaps = 11/305 (3%)
Query: 154 LMKLESLNI-KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
L ++SLN+ ++ N D L + +L +L I SK+ + G + L++LT LN+E
Sbjct: 101 LQNIQSLNVNQYFNTF---DCHVLEFMGSLNNLTIR-SKIRNEGAKCIPQLKQLTNLNVE 156
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
+ + S L L N+ ++ D+G + S++ L +N+G N I + ++
Sbjct: 157 DNKIGNEGVKCFSELKHLTNFNIRNNKIMDEGAKYISQMSQLTCMNIGNNNIGEPGAEYI 216
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
+ L +LN+ IGD+G +++ + L L++ +G+ G ++LS + L + +
Sbjct: 217 SQMKQLTNLNIHGNRIGDKGARHISEMEGLTHLDIGYNNLGNLGSQYLSQMKKLTYLFIE 276
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
+ + + ++ L L L + A I G +T + LT L + GA+I + GA +L
Sbjct: 277 GNRLDENGAKFVSELKQLTILCIGANGIGPNGARYITEMKQLTDLSIGGAKIGEEGARHL 336
Query: 393 RNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
+ L +L I L G + L SL++ + I G +H+ LKNLR L +
Sbjct: 337 KTMNQLTNLNIGYNRLGSIGAKFISEMKQLTSLDIFYNNIEDEGAKHISELKNLRKLDIG 396
Query: 447 SCKVT 451
+T
Sbjct: 397 RNNIT 401
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 112/242 (46%), Gaps = 11/242 (4%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
SQ L ++++ G+ + D G H+ + L LD + + + G ++L + LT L F
Sbjct: 217 SQMKQLTNLNIHGNRIGDKGARHISEMEGLTHLDIGYN-NLGNLGSQYLSQMKKLTYL-F 274
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHG----GLVNLKGLMKLESLNIKWCNCIT 169
N + G K + L L L C +G G + + +L L+I I
Sbjct: 275 IEGNRLDENGAKFVSELKQLTIL----CIGANGIGPNGARYITEMKQLTDLSIGGAK-IG 329
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
+ + L + L +L I +++ G ++ +++LT L++ + +S L +
Sbjct: 330 EEGARHLKTMNQLTNLNIGYNRLGSIGAKFISEMKQLTSLDIFYNNIEDEGAKHISELKN 389
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L L++ R ++D+G + S++ L L++ +N ++DE ++ +T L L++ I
Sbjct: 390 LRKLDIGRNNITDEGAKYVSQLNQLTHLSITYNNLSDEGAKYINTMTQLTKLDIGGNAIS 449
Query: 290 DE 291
D+
Sbjct: 450 DD 451
>gi|290970785|ref|XP_002668255.1| predicted protein [Naegleria gruberi]
gi|284081550|gb|EFC35511.1| predicted protein [Naegleria gruberi]
Length = 295
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 145/291 (49%), Gaps = 7/291 (2%)
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
+ +L SLNI + N I D +K +S + L SL I+ + + G Y+ +++LT L++
Sbjct: 1 MKQLTSLNINYNN-IGDEGVKLISEMKQLTSLDINYNNIGVEGAKYISEMKQLTSLDISD 59
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
+ + +S + L LN+ ++ +G + S++ L L++ N I E ++
Sbjct: 60 NNIGVEGVKLISEMKQLTSLNIRINEIGVEGAKYISEMKQLTSLDINCNNIGVEGAKYIS 119
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
+ L SL++ IG EG ++ + L L + ++G G +++S + L S+N+S
Sbjct: 120 EMKQLTSLDISWNNIGVEGAKLISEMKQLTSLNIRRNEIGDEGAKYISEMKQLTSLNISD 179
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
I + ++ + L SLN++ +I D G ++ + LT L++ +I D GA Y+
Sbjct: 180 NNIGVEGAKLISEMKQLTSLNINWNEIGDEGAKYISEMKQLTSLNISWNKIGDEGAKYIS 239
Query: 394 NFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLK 438
K L SL+I + G + L SLN++++ I G ++L +K
Sbjct: 240 EMKQLTSLDINWNKIGVEGAKLISEMKQLTSLNINDNNIGVEGAKYLSEMK 290
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 145/287 (50%), Gaps = 12/287 (4%)
Query: 41 YPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDF---NFCIQISDG 97
Y + D+ + +I S+ L S+D++ +++ G ++ + L SLD N ++
Sbjct: 11 YNNIGDEGVKLI-SEMKQLTSLDINYNNIGVEGAKYISEMKQLTSLDISDNNIGVE---- 65
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIH-GGLVNLKGLMK 156
G++ + + LTSL+ R N I +G K + + L LD+ C I G + + +
Sbjct: 66 GVKLISEMKQLTSLNIRI-NEIGVEGAKYISEMKQLTSLDI-NCNNIGVEGAKYISEMKQ 123
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV 216
L SL+I W N + K +S + L SL I +++ D G Y+ +++LT LN+ +
Sbjct: 124 LTSLDISWNNIGVEG-AKLISEMKQLTSLNIRRNEIGDEGAKYISEMKQLTSLNISDNNI 182
Query: 217 TAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT 276
+S + L LN+N ++ D+G + S++ L LN+ +N+I DE ++ +
Sbjct: 183 GVEGAKLISEMKQLTSLNINWNEIGDEGAKYISEMKQLTSLNISWNKIGDEGAKYISEMK 242
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL 323
L SL+++ IG EG ++ + L L ++D +G G ++LS +
Sbjct: 243 QLTSLDINWNKIGVEGAKLISEMKQLTSLNINDNNIGVEGAKYLSEM 289
>gi|315301494|ref|ZP_07872641.1| internalin A, partial [Listeria ivanovii FSL F6-596]
gi|313630136|gb|EFR98122.1| internalin A [Listeria ivanovii FSL F6-596]
Length = 759
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 129/417 (30%), Positives = 205/417 (49%), Gaps = 42/417 (10%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+ ++ +L + V+D+ + D + SL+ + + S G+E+L N+T L+F N
Sbjct: 54 AEVVKTNLGKATVSDT--VTQTDLDGITSLEADRNVIKSIAGVEYLN---NVTQLNFSYN 108
Query: 117 NAITAQGMKAFAGLINLVKL-DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+ L NL KL L L L+ L L L + + N ITD + P
Sbjct: 109 Q------ITDLTPLANLSKLTSLVMNNNQVADLTPLQNLTSLTDLTL-FYNKITD--VTP 159
Query: 176 LSGLTNLKSLQISCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L+ LTNL +L I+ ++++D + I L L+ L++ G VT + L L +L LN
Sbjct: 160 LANLTNLTTLAITGNEISDLTPIGSLTNLEALSI----GNQVTD--IKPLDKLTNLEQLN 213
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
L+ +++D +K+ +L+ L L N+ +D L L LTNL L+L S + D G
Sbjct: 214 LSDNKITD--ISPVAKLINLQSLTLDNNQFSD--LTPLGILTNLTELSLYSNHLSDIGT- 268
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
L L NLK L L D Q+ S L +S LTNL +N+S ISD L+ ++ L++L L
Sbjct: 269 -LASLTNLKKLNLMDNQI--SNLAPISNLTNLTDLNVSTNQISD--LKPISNLTNLTVLQ 323
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD---- 410
+ Q+ D ++ ++SLT L L L+ +I+D L N L+ L ++D
Sbjct: 324 VPTNQVED--ISPISSLTNLDFLTLYSNQISDISP--LENLTKLKQLFFYDNKVSDVSPL 379
Query: 411 AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLV 467
A LT L L+ ++I + L L L L L L+ KVT+ +K + +PN V
Sbjct: 380 ANLTTLQELSAGTNQI--SDLTPLAKLTRLTQLGLDKQKVTSQPVKYQSNIVVPNAV 434
>gi|46447466|ref|YP_008831.1| hypothetical protein pc1832 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401107|emb|CAF24556.1| hypothetical protein pc1832 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 456
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 127/232 (54%), Gaps = 9/232 (3%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
++E+LN +TD+ + L NLK L + C TD+G+A+L L L L+L GC
Sbjct: 224 EIEALNFSNNADLTDAHLLALKNCKNLKVLDLQECWNFTDAGLAHLTPLTALQHLDLTGC 283
Query: 215 -PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG--FNEITDECLVH 271
VT L LS L +L +LNL C L+D G + +LK L+L +N +TD L H
Sbjct: 284 FRVTDTGLAHLSPLVALQHLNLIGCDLTDAGLVHLKPLIALKHLDLMRCWN-LTDAGLAH 342
Query: 272 LKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESI 329
L+ L L+ LNL +C I D GL +LT L LK L+L ++ +GL L L L+ +
Sbjct: 343 LRPLVALQHLNLTNCENITDVGLAHLTPLVALKHLDLMQCWKLTGNGLARLRSLVALQHL 402
Query: 330 NLS-FTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDL 379
NLS + ++D L L L +L+ L+L + ++TD GLA L THLDL
Sbjct: 403 NLSGCSYLTDAGLAHLRPLVALQHLDLANCYELTDAGLAHFKFLAATTHLDL 454
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 118/223 (52%), Gaps = 4/223 (1%)
Query: 65 SGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+ +D+TD+ L+ LK+C NL+ LD C +D GL HL L+ L L +T G+
Sbjct: 232 NNADLTDAHLLALKNCKNLKVLDLQECWNFTDAGLAHLTPLTALQHLDLTGCFRVTDTGL 291
Query: 125 KAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
+ L+ L L+L C GLV+LK L+ L+ L++ C +TD+ + L L L+
Sbjct: 292 AHLSPLVALQHLNLIGCDLTDAGLVHLKPLIALKHLDLMRCWNLTDAGLAHLRPLVALQH 351
Query: 185 LQIS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLS 241
L ++ C +TD G+A+L L L L+L C +T L L +L +L +LNL+ C L+
Sbjct: 352 LNLTNCENITDVGLAHLTPLVALKHLDLMQCWKLTGNGLARLRSLVALQHLNLSGCSYLT 411
Query: 242 DDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNL 283
D G + +L+ L+L E+TD L H K L L+L
Sbjct: 412 DAGLAHLRPLVALQHLDLANCYELTDAGLAHFKFLAATTHLDL 454
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
+L ++L G D+TD+GL+HLK L+ LD C ++D GL HLR L L L+
Sbjct: 299 ALQHLNLIGCDLTDAGLVHLKPLIALKHLDLMRCWNLTDAGLAHLRPLVALQHLNLTNCE 358
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
IT G+ L+ L LDL +C ++ G GL L+ L+ L+ LN+ C+ +TD+ + L
Sbjct: 359 NITDVGLAHLTPLVALKHLDLMQCWKLTGNGLARLRSLVALQHLNLSGCSYLTDAGLAHL 418
Query: 177 SGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNL 211
L L+ L ++ C ++TD+G+A+ K L T L+L
Sbjct: 419 RPLVALQHLDLANCYELTDAGLAHFKFLAATTHLDL 454
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 110/210 (52%), Gaps = 13/210 (6%)
Query: 252 GSLKVLNLGFN-EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD 309
++ LN N ++TD L+ LK NL+ L+L C D GL +LT L L+ L+L+
Sbjct: 223 NEIEALNFSNNADLTDAHLLALKNCKNLKVLDLQECWNFTDAGLAHLTPLTALQHLDLTG 282
Query: 310 -TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAA 367
+V +GL HLS L L+ +NL ++D L L L +LK L+L +TD GLA
Sbjct: 283 CFRVTDTGLAHLSPLVALQHLNLIGCDLTDAGLVHLKPLIALKHLDLMRCWNLTDAGLAH 342
Query: 368 LTSLTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEI------CGGGLTD-AGLTGLVSL 419
L L L HL+L ITD G A+L L+ L++ G GL L L L
Sbjct: 343 LRPLVALQHLNLTNCENITDVGLAHLTPLVALKHLDLMQCWKLTGNGLARLRSLVALQHL 402
Query: 420 NVSN-SRITSAGLRHLKPLKNLRSLTLESC 448
N+S S +T AGL HL+PL L+ L L +C
Sbjct: 403 NLSGCSYLTDAGLAHLRPLVALQHLDLANC 432
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 111/205 (54%), Gaps = 7/205 (3%)
Query: 216 VTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLK 273
+T A L +L +L L+L C +D G + + +L+ L+L G +TD L HL
Sbjct: 236 LTDAHLLALKNCKNLKVLDLQECWNFTDAGLAHLTPLTALQHLDLTGCFRVTDTGLAHLS 295
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLS 332
L L+ LNL C + D GLV+L L LK L+L + +GL HL L L+ +NL+
Sbjct: 296 PLVALQHLNLIGCDLTDAGLVHLKPLIALKHLDLMRCWNLTDAGLAHLRPLVALQHLNLT 355
Query: 333 F-TGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFG-ARITDSGA 389
I+D L L L +LK L+L ++T GLA L SL L HL+L G + +TD+G
Sbjct: 356 NCENITDVGLAHLTPLVALKHLDLMQCWKLTGNGLARLRSLVALQHLNLSGCSYLTDAGL 415
Query: 390 AYLRNFKNLRSLEICG-GGLTDAGL 413
A+LR L+ L++ LTDAGL
Sbjct: 416 AHLRPLVALQHLDLANCYELTDAGL 440
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 102/201 (50%), Gaps = 35/201 (17%)
Query: 272 LKGLTN-LESLNL-DSCGIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLES 328
LK +N +E+LN ++ + D L+ L NLK L+L + +GL HL+ LT L+
Sbjct: 218 LKYFSNEIEALNFSNNADLTDAHLLALKNCKNLKVLDLQECWNFTDAGLAHLTPLTALQH 277
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG 388
++L+ G R +TDTGLA L+ L L HL+L G +TD+G
Sbjct: 278 LDLT------GCFR-----------------VTDTGLAHLSPLVALQHLNLIGCDLTDAG 314
Query: 389 AAYLRNFKNLRSLEICG-GGLTDAG------LTGLVSLNVSN-SRITSAGLRHLKPLKNL 440
+L+ L+ L++ LTDAG L L LN++N IT GL HL PL L
Sbjct: 315 LVHLKPLIALKHLDLMRCWNLTDAGLAHLRPLVALQHLNLTNCENITDVGLAHLTPLVAL 374
Query: 441 RSLTLESC-KVTANDIKRLQS 460
+ L L C K+T N + RL+S
Sbjct: 375 KHLDLMQCWKLTGNGLARLRS 395
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 58 SLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
+L ++LSG S +TD+GL HL+ LQ LD C +++D GL H + L+ T L R
Sbjct: 398 ALQHLNLSGCSYLTDAGLAHLRPLVALQHLDLANCYELTDAGLAHFKFLAATTHLDLR 455
>gi|386333663|ref|YP_006029833.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
gi|334196112|gb|AEG69297.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
Length = 629
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 180/402 (44%), Gaps = 14/402 (3%)
Query: 37 CLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISD 96
C G GV++ + ++A++ L S+ L+G ++ G L C++L SL C I D
Sbjct: 175 CTGS--GVSNAGLALLATR--PLKSLSLNGIEIDAEGARLLATCTSLTSLSLTGC-SIGD 229
Query: 97 GGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMK 156
L ++ SL N I G +A AG L L+L G + L
Sbjct: 230 RAATALARSRSIASLDLSVN-MIGPDGARALAG-APLASLNLHNNGIGDEGALALATSGT 287
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV 216
L+SLN N I D+ + + L L ++ + + +G L+ LT L+L +
Sbjct: 288 LKSLNAS-NNGIGDAGVLGFADNAVLTQLNLAGNMIGPAGARALRCNTSLTELDLSTNRL 346
Query: 217 TAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT 276
A L+A SL LNL ++ DDG E ++ +LK LNL +N I L G T
Sbjct: 347 GDAGAQVLAANRSLTSLNLRHNEIGDDGTEALARNTTLKSLNLSYNPIGFWGAGALGGST 406
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
L L+L C I G L +L L L ++G SG R ++ L ++LS I
Sbjct: 407 TLRELDLRCCAIDPYGASALARNTSLASLHLGSNRIGDSGARAIATSRTLTLLDLSRNNI 466
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
D + LAG SL SLNL ++ D G AAL LT L+L RI +GA +L
Sbjct: 467 HDAGAQALAGNGSLTSLNLYGNEVDDDGAAALAHHPRLTSLNLGRNRIGPNGAQHLAKSA 526
Query: 397 NLRSLEICGGGLTDAGL------TGLVSLNVSNSRITSAGLR 432
L L++ + G T L +LNVS++ I G R
Sbjct: 527 TLTELDLSENRIGPEGADALSLSTVLTTLNVSDNAIGEKGAR 568
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 200/472 (42%), Gaps = 47/472 (9%)
Query: 2 LPRDISQQIFNEL--VYSRCLTEVSLE------------AFRDCALQDLCLGQYPGVNDK 47
LP ++ QQI + R + EV+ E R+ A+ LG+YP +
Sbjct: 91 LPPELWQQIGSSAGARPRRAMREVNRELRNASRAVVTHLTIRNPAMFG-QLGKYPALKSV 149
Query: 48 W------MDVIASQGSSLLSVDLS---GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGG 98
++ + + + +D+S GS V+++GL L L+SL N I+I G
Sbjct: 150 RFKGALTLEALKALPPGVEHLDISRCTGSGVSNAGLALLA-TRPLKSLSLN-GIEIDAEG 207
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
L ++LTSLS +I + A A ++ LDL G L G L
Sbjct: 208 ARLLATCTSLTSLSLT-GCSIGDRAATALARSRSIASLDLSVNMIGPDGARALAG-APLA 265
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
SLN+ N I D L+ LKSL S + + D+G+ LT LNL G +
Sbjct: 266 SLNLH-NNGIGDEGALALATSGTLKSLNASNNGIGDAGVLGFADNAVLTQLNLAGNMIGP 324
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
A +L SL L+L+ +L D G + + SL LNL NEI D+ L T L
Sbjct: 325 AGARALRCNTSLTELDLSTNRLGDAGAQVLAANRSLTSLNLRHNEIGDDGTEALARNTTL 384
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
+SLNL IG G L G L+ L+L + G L+ T+L S++L I D
Sbjct: 385 KSLNLSYNPIGFWGAGALGGSTTLRELDLRCCAIDPYGASALARNTSLASLHLGSNRIGD 444
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 398
R +A +L L+L I D G AL LT L+L+G + D GAA L +
Sbjct: 445 SGARAIATSRTLTLLDLSRNNIHDAGAQALAGNGSLTSLNLYGNEVDDDGAAALAHHPR- 503
Query: 399 RSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
L SLN+ +RI G +HL L L L ++
Sbjct: 504 -----------------LTSLNLGRNRIGPNGAQHLAKSATLTELDLSENRI 538
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 147/338 (43%), Gaps = 4/338 (1%)
Query: 56 GSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
G+ L S++L + + D G + L L+SL+ + I D G+ + LT L+
Sbjct: 261 GAPLASLNLHNNGIGDEGALALATSGTLKSLNASNN-GIGDAGVLGFADNAVLTQLNLA- 318
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
N I G +A +L +LDL G L L SLN++ N I D +
Sbjct: 319 GNMIGPAGARALRCNTSLTELDLSTNRLGDAGAQVLAANRSLTSLNLRH-NEIGDDGTEA 377
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L+ T LKSL +S + + G L G L L+L C + +L+ SL L+L
Sbjct: 378 LARNTTLKSLNLSYNPIGFWGAGALGGSTTLRELDLRCCAIDPYGASALARNTSLASLHL 437
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
++ D G + +L +L+L N I D L G +L SLNL + D+G
Sbjct: 438 GSNRIGDSGARAIATSRTLTLLDLSRNNIHDAGAQALAGNGSLTSLNLYGNEVDDDGAAA 497
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L L L L ++G +G +HL+ L ++LS I L+ + L +LN+
Sbjct: 498 LAHHPRLTSLNLGRNRIGPNGAQHLAKSATLTELDLSENRIGPEGADALSLSTVLTTLNV 557
Query: 356 DARQITDTGLAALTSL-TGLTHLDLFGARITDSGAAYL 392
I + G A T LT LD + ++GA L
Sbjct: 558 SDNAIGEKGARAFAEKSTSLTSLDARNNGMGEAGAKML 595
>gi|168054406|ref|XP_001779622.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668936|gb|EDQ55533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 627
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 212/460 (46%), Gaps = 71/460 (15%)
Query: 18 RCLTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIH 76
R +T+V L A R C L+ L L G+ D + +A+ L ++DLS ++V+D G+
Sbjct: 145 RDVTDVGLSALRRCTELRILGLKYCSGIGDSGIQNVATGCPQLRNIDLSFTEVSDKGVSS 204
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLR-GLSNLTSLSFRRNNAITAQGMKAFAGL-INLV 134
L NL+ L CI ++D GL LR G +L L + + ++++G+ A G+ + L
Sbjct: 205 LALLKNLECLSIISCINVTDKGLSCLRSGCMSLQKLDVAKCSNVSSRGILALTGISLGLQ 264
Query: 135 KLDLERCTRIHG----------------------GLVNLK--GLMKLESLNIKWCNCITD 170
+L+L C +I G VNL G +L+ L++ C +TD
Sbjct: 265 ELNLSYCKKISDVLFASFQKLKTLQVVKLNGCAIGRVNLSLIGCKELKELSLSKCQGVTD 324
Query: 171 SDMK-PLSGLTNLKSLQISCSK-VTDSGI-AYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
+ + ++ T L+ L ++C + +TD + A + L L +E CP + + L+ +
Sbjct: 325 ASVVGVVTACTGLQKLDLTCCRDITDVALEAIAANCKGLLSLRMENCPSVTS--EGLTLI 382
Query: 228 GSLFY----LNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKG-LTNLESL 281
G F L+L L+D+G + S+ +++L LG+ +IT+ L + NL
Sbjct: 383 GRNFAHLEELDLTDSNLNDNGLKSISRCTEMRLLKLGYCMDITNAGLASISSTCKNLREF 442
Query: 282 N-LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG-ISDG 339
+ S GI D+G+ + C+ L+ +NLS+ I+D
Sbjct: 443 DCYRSVGISDDGVAAIARGCD-----------------------RLKVVNLSYCASITDA 479
Query: 340 SLRKLAGLSSLKSLNLDA-RQITDTGLAAL-TSLTGLTHLDLFGAR-ITDSGAAYL-RNF 395
SL LA L L L L A QIT G++ + S L LD+ R + D G L R
Sbjct: 480 SLHSLALLRDLVQLELRACSQITSVGISYIGASCKHLRELDIKRCRFVGDPGVLALSRGC 539
Query: 396 KNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLK 435
+NLR + + LTD G+T + ++ S I L H+K
Sbjct: 540 RNLRQINLSYTALTDLGMTAVANM----SCIQDMKLVHMK 575
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 205/464 (44%), Gaps = 58/464 (12%)
Query: 44 VNDKWMDVIAS-QGSSLLSVDLSGSD-VTDSGLIHLKDCSNLQSLDFNFCIQISDG---- 97
V D+ + +A S LLS+ L + +G+ L +CS+LQ +D C QI D
Sbjct: 70 VTDQCLATVAKFTNSRLLSIKLIRTKGFGIAGVKSLVECSSLQDVDVTHCTQIGDAEVIV 129
Query: 98 ---------------------GLEHLRGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVK 135
GL LR + L L + + I G++ A G L
Sbjct: 130 LSKLKHLQKLKLNSCRDVTDVGLSALRRCTELRILGLKYCSGIGDSGIQNVATGCPQLRN 189
Query: 136 LDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQIS-CSKVT 193
+DL G+ +L L LE L+I C +TD + L SG +L+ L ++ CS V+
Sbjct: 190 IDLSFTEVSDKGVSSLALLKNLECLSIISCINVTDKGLSCLRSGCMSLQKLDVAKCSNVS 249
Query: 194 DSGIAYLKGLQ-KLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI 251
GI L G+ L LNL C ++ S L +L + LN C + G S I
Sbjct: 250 SRGILALTGISLGLQELNLSYCKKISDVLFASFQKLKTLQVVKLNGCAI---GRVNLSLI 306
Query: 252 GSLKVLNLGFNE---ITDECLVH-LKGLTNLESLNLDSC-GIGDEGLVNLTGLCN-LKCL 305
G ++ L ++ +TD +V + T L+ L+L C I D L + C L L
Sbjct: 307 GCKELKELSLSKCQGVTDASVVGVVTACTGLQKLDLTCCRDITDVALEAIAANCKGLLSL 366
Query: 306 ELSD-TQVGSSGLRHL-SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD-ARQITD 362
+ + V S GL + +LE ++L+ + ++D L+ ++ + ++ L L IT+
Sbjct: 367 RMENCPSVTSEGLTLIGRNFAHLEELDLTDSNLNDNGLKSISRCTEMRLLKLGYCMDITN 426
Query: 363 TGLAALTS-LTGLTHLDLF-GARITDSG-AAYLRNFKNLR--SLEICGGGLTDAGLTGLV 417
GLA+++S L D + I+D G AA R L+ +L C +TDA L L
Sbjct: 427 AGLASISSTCKNLREFDCYRSVGISDDGVAAIARGCDRLKVVNLSYC-ASITDASLHSLA 485
Query: 418 SLN-------VSNSRITSAGLRHL-KPLKNLRSLTLESCKVTAN 453
L + S+ITS G+ ++ K+LR L ++ C+ +
Sbjct: 486 LLRDLVQLELRACSQITSVGISYIGASCKHLRELDIKRCRFVGD 529
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 155/354 (43%), Gaps = 65/354 (18%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 215
++E L++ C +TD + ++ TN + L I + GIA +K
Sbjct: 58 QVEHLDLSSCVEVTDQCLATVAKFTNSRLLSIKLIRTKGFGIAGVK-------------- 103
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN---EITDECLVHL 272
SL SL +++ C D E + L N ++TD L L
Sbjct: 104 -------SLVECSSLQDVDVTHCTQIGDA-EVIVLSKLKHLQKLKLNSCRDVTDVGLSAL 155
Query: 273 KGLTNLESLNLDSC-GIGDEGLVNL-TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
+ T L L L C GIGD G+ N+ TG L+ ++LS T+V G+ L+ L NLE ++
Sbjct: 156 RRCTELRILGLKYCSGIGDSGIQNVATGCPQLRNIDLSFTEVSDKGVSSLALLKNLECLS 215
Query: 331 -LSFTGISDGSLRKL-AGLSSLKSLNL-DARQITDTGLAALTSLT-GLTHLDL-FGARIT 385
+S ++D L L +G SL+ L++ ++ G+ ALT ++ GL L+L + +I+
Sbjct: 216 IISCINVTDKGLSCLRSGCMSLQKLDVAKCSNVSSRGILALTGISLGLQELNLSYCKKIS 275
Query: 386 DSGAAYLRNFKNLRSLEICG------------------------GGLTDAGLTGLVS--- 418
D A + K L+ +++ G G+TDA + G+V+
Sbjct: 276 DVLFASFQKLKTLQVVKLNGCAIGRVNLSLIGCKELKELSLSKCQGVTDASVVGVVTACT 335
Query: 419 ----LNVSNSR-ITSAGLRHLKP-LKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
L+++ R IT L + K L SL +E+C ++ L R+ +L
Sbjct: 336 GLQKLDLTCCRDITDVALEAIAANCKGLLSLRMENCPSVTSEGLTLIGRNFAHL 389
>gi|290979162|ref|XP_002672303.1| predicted protein [Naegleria gruberi]
gi|284085879|gb|EFC39559.1| predicted protein [Naegleria gruberi]
Length = 371
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 146/314 (46%), Gaps = 10/314 (3%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
+K L KL S N N I + K +S L L L IS +K+ G Y+ L++LT L+
Sbjct: 1 MKSLTKLISCN----NNIGVEEAKYISELKQLTHLYISSNKIGVEGAKYISELKQLTNLD 56
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
+ + A ++ + L L +L + + D+G + S + L L FN I E +
Sbjct: 57 ISYNNIGAEGVEHIGNLKQLTFLCIYHNNIGDEGAKHLSALKQLTYLYTAFNNIGVEGVK 116
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
++ L L LN+ S +GDEG L+ L L L +S++ + + G+ H++ + L +N
Sbjct: 117 YIIKLKQLSYLNICSNKVGDEGAKYLSELKQLTNLNISNSNICAKGVEHITEMNQLTILN 176
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
+S I + + L L LN+ I G ++ + LT L++ I GA
Sbjct: 177 ISTNNIGIEGAKYIGKLKQLTCLNIYYSNIDIEGAKYISEMKQLTDLNISYNNIGIEGAK 236
Query: 391 YLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
Y+ K L L I + D G L L +LN+ ++ I G +++ LK L +L
Sbjct: 237 YIGKLKQLTCLTIYNNYICDEGAKYISELNQLTNLNIYSNNIGDEGAKYISELKQLTNLD 296
Query: 445 LESCKVTANDIKRL 458
+ ++ A +K +
Sbjct: 297 ISVNQIGAKGVKYI 310
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 162/332 (48%), Gaps = 13/332 (3%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI---QISDGGLEHLRGLSNLTS 110
S+ L ++D+S +++ G+ H+ NL+ L F CI I D G +HL L LT
Sbjct: 47 SELKQLTNLDISYNNIGAEGVEHI---GNLKQLTF-LCIYHNNIGDEGAKHLSALKQLTY 102
Query: 111 LSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG--GLVNLKGLMKLESLNIKWCNCI 168
L NN I +G+K L L L++ C+ G G L L +L +LNI N I
Sbjct: 103 LYTAFNN-IGVEGVKYIIKLKQLSYLNI--CSNKVGDEGAKYLSELKQLTNLNISNSN-I 158
Query: 169 TDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG 228
++ ++ + L L IS + + G Y+ L++LT LN+ + +S +
Sbjct: 159 CAKGVEHITEMNQLTILNISTNNIGIEGAKYIGKLKQLTCLNIYYSNIDIEGAKYISEMK 218
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
L LN++ + +G + K+ L L + N I DE ++ L L +LN+ S I
Sbjct: 219 QLTDLNISYNNIGIEGAKYIGKLKQLTCLTIYNNYICDEGAKYISELNQLTNLNIYSNNI 278
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
GDEG ++ L L L++S Q+G+ G+++++ L L ++ S I D + ++ L
Sbjct: 279 GDEGAKYISELKQLTNLDISVNQIGAKGVKYIAELNQLTILSASLNNIRDEGAKYISELK 338
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
L +L++ + I+ G+ + LT L+++
Sbjct: 339 QLTNLDISSNNISIEGVKCFEEMKHLTVLEIY 370
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 145/316 (45%), Gaps = 2/316 (0%)
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
G +++ L LT+L NN I A+G++ L L L + G +L L +L
Sbjct: 42 GAKYISELKQLTNLDISYNN-IGAEGVEHIGNLKQLTFLCIYHNNIGDEGAKHLSALKQL 100
Query: 158 ESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
L + N I +K + L L L I +KV D G YL L++LT LN+ +
Sbjct: 101 TYLYTAFNN-IGVEGVKYIIKLKQLSYLNICSNKVGDEGAKYLSELKQLTNLNISNSNIC 159
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 277
A ++ ++ + L LN++ + +G + K+ L LN+ ++ I E ++ +
Sbjct: 160 AKGVEHITEMNQLTILNISTNNIGIEGAKYIGKLKQLTCLNIYYSNIDIEGAKYISEMKQ 219
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
L LN+ IG EG + L L CL + + + G +++S L L ++N+ I
Sbjct: 220 LTDLNISYNNIGIEGAKYIGKLKQLTCLTIYNNYICDEGAKYISELNQLTNLNIYSNNIG 279
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
D + ++ L L +L++ QI G+ + L LT L I D GA Y+ K
Sbjct: 280 DEGAKYISELKQLTNLDISVNQIGAKGVKYIAELNQLTILSASLNNIRDEGAKYISELKQ 339
Query: 398 LRSLEICGGGLTDAGL 413
L +L+I ++ G+
Sbjct: 340 LTNLDISSNNISIEGV 355
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 162/367 (44%), Gaps = 33/367 (8%)
Query: 98 GLEHLRGLSNLTSLS--FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLM 155
G+E + +S L L+ + +N I +G K + L L LD+ G+ ++ L
Sbjct: 15 GVEEAKYISELKQLTHLYISSNKIGVEGAKYISELKQLTNLDISYNNIGAEGVEHIGNLK 74
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 215
+L L I + N I D K LS L L L + + + G+ Y+ L++L+
Sbjct: 75 QLTFLCI-YHNNIGDEGAKHLSALKQLTYLYTAFNNIGVEGVKYIIKLKQLS-------- 125
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
YLN+ ++ D+G + S++ L LN+ + I + + H+ +
Sbjct: 126 ----------------YLNICSNKVGDEGAKYLSELKQLTNLNISNSNICAKGVEHITEM 169
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 335
L LN+ + IG EG + L L CL + + + G +++S + L +N+S+
Sbjct: 170 NQLTILNISTNNIGIEGAKYIGKLKQLTCLNIYYSNIDIEGAKYISEMKQLTDLNISYNN 229
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF 395
I + + L L L + I D G ++ L LT+L+++ I D GA Y+
Sbjct: 230 IGIEGAKYIGKLKQLTCLTIYNNYICDEGAKYISELNQLTNLNIYSNNIGDEGAKYISEL 289
Query: 396 KNLRSLEICGGGLTDAGLTGLVSLN------VSNSRITSAGLRHLKPLKNLRSLTLESCK 449
K L +L+I + G+ + LN S + I G +++ LK L +L + S
Sbjct: 290 KQLTNLDISVNQIGAKGVKYIAELNQLTILSASLNNIRDEGAKYISELKQLTNLDISSNN 349
Query: 450 VTANDIK 456
++ +K
Sbjct: 350 ISIEGVK 356
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 163/353 (46%), Gaps = 9/353 (2%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L + +S + + G ++ + L +LD ++ I G+EH+ L LT L
Sbjct: 23 SELKQLTHLYISSNKIGVEGAKYISELKQLTNLDISYN-NIGAEGVEHIGNLKQLTFLCI 81
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLN-IKWC-NCITD 170
NN I +G K + L L L T + G+ +K ++KL+ L+ + C N + D
Sbjct: 82 YHNN-IGDEGAKHLSALKQLTYL----YTAFNNIGVEGVKYIIKLKQLSYLNICSNKVGD 136
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
K LS L L +L IS S + G+ ++ + +LT+LN+ + + L L
Sbjct: 137 EGAKYLSELKQLTNLNISNSNICAKGVEHITEMNQLTILNISTNNIGIEGAKYIGKLKQL 196
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
LN+ + +G + S++ L LN+ +N I E ++ L L L + + I D
Sbjct: 197 TCLNIYYSNIDIEGAKYISEMKQLTDLNISYNNIGIEGAKYIGKLKQLTCLTIYNNYICD 256
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
EG ++ L L L + +G G +++S L L ++++S I ++ +A L+ L
Sbjct: 257 EGAKYISELNQLTNLNIYSNNIGDEGAKYISELKQLTNLDISVNQIGAKGVKYIAELNQL 316
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
L+ I D G ++ L LT+LD+ I+ G K+L LEI
Sbjct: 317 TILSASLNNIRDEGAKYISELKQLTNLDISSNNISIEGVKCFEEMKHLTVLEI 369
>gi|290978242|ref|XP_002671845.1| predicted protein [Naegleria gruberi]
gi|284085417|gb|EFC39101.1| predicted protein [Naegleria gruberi]
Length = 439
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 162/354 (45%), Gaps = 27/354 (7%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
+L +D+S ++++D + H + ++L +L N C I G + L L+ LT L+ NN
Sbjct: 101 NLTRIDISDNEISDERVKHFGNLTHLTNLVIN-CNDIGVEGAKCLCQLNQLTRLNIG-NN 158
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS 177
++ +G K + L NL KLD+ R NCI D + ++
Sbjct: 159 SLETEGAKYISELKNLTKLDIAR-------------------------NCIGDRGAQFIT 193
Query: 178 GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
+ L SL ++ + + G ++ + +LT L++ + + +S L L L +
Sbjct: 194 EMKQLTSLNLNRNGIEYLGAKFISEMYQLTSLDISNNDIGSEGAKQISKLDQLTKLYIYD 253
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
+ D+G S++ L L++ N+I E + L L +LN+ S IG+ G +++
Sbjct: 254 NNIGDEGAMHISEMKQLTNLDISRNDIDSEGAKSICELYQLTNLNICSNYIGETGAKHIS 313
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA 357
+ NL LE+ ++GS G H+S + L + + I + + ++ + L L++
Sbjct: 314 EMNNLTILEIGSNEIGSEGAYHISRMHQLTRLMIFANDIGEKGAKHVSEMKQLTKLDIYD 373
Query: 358 RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
I D G ++ + LT+LD+ I GA Y+R L L + +D+
Sbjct: 374 NNIGDEGTIHISEMKQLTYLDVSANNIGHEGAEYIRKLNRLTFLNVHYNSFSDS 427
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 143/317 (45%), Gaps = 4/317 (1%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIH-GGLVNLKGLMKLESLNIK 163
L NLT + +N I+ + +K F L +L L + C I G L L +L LNI
Sbjct: 99 LKNLTRIDIS-DNEISDERVKHFGNLTHLTNLVI-NCNDIGVEGAKCLCQLNQLTRLNIG 156
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
N + K +S L NL L I+ + + D G ++ +++LT LNL +
Sbjct: 157 -NNSLETEGAKYISELKNLTKLDIARNCIGDRGAQFITEMKQLTSLNLNRNGIEYLGAKF 215
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
+S + L L+++ + +G ++ SK+ L L + N I DE +H+ + L +L++
Sbjct: 216 ISEMYQLTSLDISNNDIGSEGAKQISKLDQLTKLYIYDNNIGDEGAMHISEMKQLTNLDI 275
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
I EG ++ L L L + +G +G +H+S + NL + + I
Sbjct: 276 SRNDIDSEGAKSICELYQLTNLNICSNYIGETGAKHISEMNNLTILEIGSNEIGSEGAYH 335
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
++ + L L + A I + G ++ + LT LD++ I D G ++ K L L++
Sbjct: 336 ISRMHQLTRLMIFANDIGEKGAKHVSEMKQLTKLDIYDNNIGDEGTIHISEMKQLTYLDV 395
Query: 404 CGGGLTDAGLTGLVSLN 420
+ G + LN
Sbjct: 396 SANNIGHEGAEYIRKLN 412
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 112/236 (47%), Gaps = 12/236 (5%)
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE---CLVHLKGLTNLES 280
L +L ++++ ++SD+ + F + L L + N+I E CL L LT
Sbjct: 96 FECLKNLTRIDISDNEISDERVKHFGNLTHLTNLVINCNDIGVEGAKCLCQLNQLT---R 152
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
LN+ + + EG ++ L NL L+++ +G G + ++ + L S+NL+ GI
Sbjct: 153 LNIGNNSLETEGAKYISELKNLTKLDIARNCIGDRGAQFITEMKQLTSLNLNRNGIEYLG 212
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRS 400
+ ++ + L SL++ I G ++ L LT L ++ I D GA ++ K L +
Sbjct: 213 AKFISEMYQLTSLDISNNDIGSEGAKQISKLDQLTKLYIYDNNIGDEGAMHISEMKQLTN 272
Query: 401 LEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
L+I + G L L +LN+ ++ I G +H+ + NL L + S ++
Sbjct: 273 LDISRNDIDSEGAKSICELYQLTNLNICSNYIGETGAKHISEMNNLTILEIGSNEI 328
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 31/223 (13%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L S+D+S +D+ G + L L + + I D G H+ + LT+L
Sbjct: 217 SEMYQLTSLDISNNDIGSEGAKQISKLDQLTKL-YIYDNNIGDEGAMHISEMKQLTNLDI 275
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHG--------------------------G 147
RN+ I ++G K+ L L L++ C+ G G
Sbjct: 276 SRND-IDSEGAKSICELYQLTNLNI--CSNYIGETGAKHISEMNNLTILEIGSNEIGSEG 332
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
++ + +L L I + N I + K +S + L L I + + D G ++ +++LT
Sbjct: 333 AYHISRMHQLTRLMI-FANDIGEKGAKHVSEMKQLTKLDIYDNNIGDEGTIHISEMKQLT 391
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
L++ + + + L L +LN++ SD E K
Sbjct: 392 YLDVSANNIGHEGAEYIRKLNRLTFLNVHYNSFSDSESELIEK 434
>gi|290998898|ref|XP_002682017.1| predicted protein [Naegleria gruberi]
gi|284095643|gb|EFC49273.1| predicted protein [Naegleria gruberi]
Length = 408
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 143/279 (51%), Gaps = 8/279 (2%)
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
+ +L SLNI N I K +S +T L SL IS +++ G ++ +++LT L++
Sbjct: 130 MKQLTSLNIS-DNQIGLEGAKYISEMTQLTSLDISVNRIGVEGAKFISEMKQLTSLDISV 188
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
+ + +S + L L+++ Q+ +G + S++ L L++ N I E +
Sbjct: 189 NRIGVEGVKFISEMKQLTSLDISDNQIGLEGSKYISEMTQLTSLDISVNRIGVEGAKFIS 248
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
+ L SLN+ IG EG+ ++ + L L++SD Q+G G +++S +T L S+++S
Sbjct: 249 EMKQLTSLNISVNRIGVEGVKFISEMKQLTSLDISDNQIG-LGAKYISEMTQLTSLDISV 307
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
I D + ++ + L SL++ QI G ++ +T LT L + RI GA ++
Sbjct: 308 NRIGDEGAKFISEMKQLTSLDICDNQIGVEGAKFISEMTQLTSLVITSNRIGVEGAKFIS 367
Query: 394 NFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRI 426
K L SL+I G + D G + L SLN+S +RI
Sbjct: 368 EMKQLTSLDISGNRIGDEGVKFISEMKQLTSLNISVNRI 406
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 132/277 (47%), Gaps = 35/277 (12%)
Query: 215 PVTAACLDSL------SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
V+ LDSL S + L LN++ Q+ +G + S++ L L++ N I E
Sbjct: 112 KVSRRLLDSLEQPKFISEMKQLTSLNISDNQIGLEGAKYISEMTQLTSLDISVNRIGVEG 171
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
+ + L SL++ IG EG+ ++ + L L++SD Q+G G +++S +T L S
Sbjct: 172 AKFISEMKQLTSLDISVNRIGVEGVKFISEMKQLTSLDISDNQIGLEGSKYISEMTQLTS 231
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNL--------------DARQIT-------DTGLAA 367
+++S I + ++ + L SLN+ + +Q+T GL A
Sbjct: 232 LDISVNRIGVEGAKFISEMKQLTSLNISVNRIGVEGVKFISEMKQLTSLDISDNQIGLGA 291
Query: 368 --LTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSL 419
++ +T LT LD+ RI D GA ++ K L SL+IC + G +T L SL
Sbjct: 292 KYISEMTQLTSLDISVNRIGDEGAKFISEMKQLTSLDICDNQIGVEGAKFISEMTQLTSL 351
Query: 420 NVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIK 456
++++RI G + + +K L SL + ++ +K
Sbjct: 352 VITSNRIGVEGAKFISEMKQLTSLDISGNRIGDEGVK 388
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 6/261 (2%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ + L S+D+S + + G + + L SLD + +I G++ + + LTSL
Sbjct: 152 SEMTQLTSLDISVNRIGVEGAKFISEMKQLTSLDISVN-RIGVEGVKFISEMKQLTSLDI 210
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIH-GGLVNLKGLMKLESLNIKWCNCITDSD 172
+N I +G K + + L LD+ RI G + + +L SLNI N I
Sbjct: 211 S-DNQIGLEGSKYISEMTQLTSLDIS-VNRIGVEGAKFISEMKQLTSLNIS-VNRIGVEG 267
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
+K +S + L SL IS +++ G Y+ + +LT L++ + +S + L
Sbjct: 268 VKFISEMKQLTSLDISDNQI-GLGAKYISEMTQLTSLDISVNRIGDEGAKFISEMKQLTS 326
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L++ Q+ +G + S++ L L + N I E + + L SL++ IGDEG
Sbjct: 327 LDICDNQIGVEGAKFISEMTQLTSLVITSNRIGVEGAKFISEMKQLTSLDISGNRIGDEG 386
Query: 293 LVNLTGLCNLKCLELSDTQVG 313
+ ++ + L L +S ++G
Sbjct: 387 VKFISEMKQLTSLNISVNRIG 407
>gi|290984286|ref|XP_002674858.1| predicted protein [Naegleria gruberi]
gi|284088451|gb|EFC42114.1| predicted protein [Naegleria gruberi]
Length = 385
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 105/193 (54%), Gaps = 9/193 (4%)
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
L NL +LN+ SC IG+EG + L NL L++ + +GS G+++++ L+NL S+N+
Sbjct: 182 LNNLITLNITSCNIGEEGSKEIAKLSNLTELKIDNNNIGSEGVKYIAQLSNLTSLNVYNN 241
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
I +++ L +LK+LN+D I D G ++ L LT L+++ I GA +
Sbjct: 242 NIGTEGAKEIGKLLNLKTLNIDNNYIGDEGAQEISKLINLTSLNMYKNSIGYEGAKAISK 301
Query: 395 FKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
NLR+L I + + G LT L SLN+SN+ I G + + L NL L +++
Sbjct: 302 LGNLRALTIYNNYIGEEGAKEISKLTNLTSLNISNNNIGDEGAKEITKLSNLTGLKIDNN 361
Query: 449 KV---TANDIKRL 458
+ A +I++L
Sbjct: 362 NIGYEAAKEIRQL 374
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%)
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
+ L +L LN+ C + ++G ++ +K+ +L L + N I E + ++ L+NL SLN+
Sbjct: 179 IGKLNNLITLNITSCNIGEEGSKEIAKLSNLTELKIDNNNIGSEGVKYIAQLSNLTSLNV 238
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
+ IG EG + L NLK L + + +G G + +S L NL S+N+ I +
Sbjct: 239 YNNNIGTEGAKEIGKLLNLKTLNIDNNYIGDEGAQEISKLINLTSLNMYKNSIGYEGAKA 298
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
++ L +L++L + I + G ++ LT LT L++ I D GA + NL L+I
Sbjct: 299 ISKLGNLRALTIYNNYIGEEGAKEISKLTNLTSLNISNNNIGDEGAKEITKLSNLTGLKI 358
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 143/316 (45%), Gaps = 58/316 (18%)
Query: 64 LSGSDVTDSGLIHLK-----------DCSNLQSLDFNFCI---QISDGGLEHLRGLS-NL 108
+S SD T+S L +++ + N +++ F CI S G + L+G++ N
Sbjct: 87 ISDSDFTESKLENIQFILCKFNNSNFNYENFENVTFTDCIYDDNCSFSGEKQLKGIALNQ 146
Query: 109 TSLSF----RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW 164
S+ F ++NN I IN + L+ ++ + L L+ +LNI
Sbjct: 147 NSIKFEILDQKNNWI-----------INYLDLNNNVGYKLAKFIGKLNNLI---TLNITS 192
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
CN I + K ++ L+NL L+I + + G+ Y+ L LT LN+ +
Sbjct: 193 CN-IGEEGSKEIAKLSNLTELKIDNNNIGSEGVKYIAQLSNLTSLNVYNNNIGT------ 245
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
+G ++ K+ +LK LN+ N I DE + L NL SLN+
Sbjct: 246 ------------------EGAKEIGKLLNLKTLNIDNNYIGDEGAQEISKLINLTSLNMY 287
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
IG EG ++ L NL+ L + + +G G + +S LTNL S+N+S I D +++
Sbjct: 288 KNSIGYEGAKAISKLGNLRALTIYNNYIGEEGAKEISKLTNLTSLNISNNNIGDEGAKEI 347
Query: 345 AGLSSLKSLNLDARQI 360
LS+L L +D I
Sbjct: 348 TKLSNLTGLKIDNNNI 363
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 1/204 (0%)
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN 258
++ L L LN+ C + ++ L +L L ++ + +G + +++ +L LN
Sbjct: 178 FIGKLNNLITLNITSCNIGEEGSKEIAKLSNLTELKIDNNNIGSEGVKYIAQLSNLTSLN 237
Query: 259 LGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
+ N I E + L NL++LN+D+ IGDEG ++ L NL L + +G G +
Sbjct: 238 VYNNNIGTEGAKEIGKLLNLKTLNIDNNYIGDEGAQEISKLINLTSLNMYKNSIGYEGAK 297
Query: 319 HLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 378
+S L NL ++ + I + ++++ L++L SLN+ I D G +T L+ LT L
Sbjct: 298 AISKLGNLRALTIYNNYIGEEGAKEISKLTNLTSLNISNNNIGDEGAKEITKLSNLTGLK 357
Query: 379 LFGARITDSGAAYLRN-FKNLRSL 401
+ I A +R KNL+ L
Sbjct: 358 IDNNNIGYEAAKEIRQLLKNLKYL 381
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 7/201 (3%)
Query: 250 KIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSD 309
K+ +L LN+ I +E + L+NL L +D+ IG EG+ + L NL L + +
Sbjct: 181 KLNNLITLNITSCNIGEEGSKEIAKLSNLTELKIDNNNIGSEGVKYIAQLSNLTSLNVYN 240
Query: 310 TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALT 369
+G+ G + + L NL+++N+ I D ++++ L +L SLN+ I G A++
Sbjct: 241 NNIGTEGAKEIGKLLNLKTLNIDNNYIGDEGAQEISKLINLTSLNMYKNSIGYEGAKAIS 300
Query: 370 SLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSN 423
L L L ++ I + GA + NL SL I + D G L+ L L + N
Sbjct: 301 KLGNLRALTIYNNYIGEEGAKEISKLTNLTSLNISNNNIGDEGAKEITKLSNLTGLKIDN 360
Query: 424 SRITSAGLRHLKP-LKNLRSL 443
+ I + ++ LKNL+ L
Sbjct: 361 NNIGYEAAKEIRQLLKNLKYL 381
>gi|414586495|tpg|DAA37066.1| TPA: hypothetical protein ZEAMMB73_067914 [Zea mays]
Length = 115
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 71/112 (63%), Gaps = 31/112 (27%)
Query: 392 LRNFKNLRSLEICGGGLTDAG-------------------------------LTGLVSLN 420
R FKN++SLE+CGG +TDAG LT LVSLN
Sbjct: 4 FRFFKNIQSLEVCGGLITDAGVKNIKDLKALTLLNLSQNGKLTDKTLELISGLTALVSLN 63
Query: 421 VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFRPE 472
VSNSR++++GL HLKPL+NLRSL+LESC+VTA+++ +L+ LPNL+S RPE
Sbjct: 64 VSNSRVSNSGLHHLKPLQNLRSLSLESCRVTASEMDKLRLVALPNLISVRPE 115
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%)
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
G+ N+K L L LN+ +TD ++ +SGLT L SL +S S+V++SG+ +LK LQ
Sbjct: 23 AGVKNIKDLKALTLLNLSQNGKLTDKTLELISGLTALVSLNVSNSRVSNSGLHHLKPLQN 82
Query: 206 LTLLNLEGCPVTAACLDSL 224
L L+LE C VTA+ +D L
Sbjct: 83 LRSLSLESCRVTASEMDKL 101
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 25/109 (22%)
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNL-EGCPVTAACLDSLSALGSLFYLNLNRCQ 239
N++SL++ +TD+G+ +K L+ LTLLNL + +T L+ +S L +L LN++ +
Sbjct: 9 NIQSLEVCGGLITDAGVKNIKDLKALTLLNLSQNGKLTDKTLELISGLTALVSLNVSNSR 68
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
+S+ G L HLK L NL SL+L+SC +
Sbjct: 69 VSNSG------------------------LHHLKPLQNLRSLSLESCRV 93
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG-ISDGSLRKLAGLSSLKSLNLDARQ 359
N++ LE+ + +G++++ L L +NLS G ++D +L ++GL++L SLN+ +
Sbjct: 9 NIQSLEVCGGLITDAGVKNIKDLKALTLLNLSQNGKLTDKTLELISGLTALVSLNVSNSR 68
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
++++GL L L L L L R+T S LR
Sbjct: 69 VSNSGLHHLKPLQNLRSLSLESCRVTASEMDKLR 102
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC 141
N+QSL+ + I+D G+++++ L LT L+ +N +T + ++ +GL LV L++
Sbjct: 9 NIQSLEVCGGL-ITDAGVKNIKDLKALTLLNLSQNGKLTDKTLELISGLTALVSLNVSNS 67
Query: 142 TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS--GLTNLKSLQ 186
+ GL +LK L L SL+++ C +T S+M L L NL S++
Sbjct: 68 RVSNSGLHHLKPLQNLRSLSLESCR-VTASEMDKLRLVALPNLISVR 113
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 20 LTEVSLEAFRDC-ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLK 78
+T+ ++ +D AL L L Q + DK +++I S ++L+S+++S S V++SGL HLK
Sbjct: 20 ITDAGVKNIKDLKALTLLNLSQNGKLTDKTLELI-SGLTALVSLNVSNSRVSNSGLHHLK 78
Query: 79 DCSNLQSLDFNFCIQISDGGLEHLR--GLSNLTSL 111
NL+SL C +++ ++ LR L NL S+
Sbjct: 79 PLQNLRSLSLESC-RVTASEMDKLRLVALPNLISV 112
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 264 ITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG 322
ITD + ++K L L LNL G + D+ L ++GL L L +S+++V +SGL HL
Sbjct: 20 ITDAGVKNIKDLKALTLLNLSQNGKLTDKTLELISGLTALVSLNVSNSRVSNSGLHHLKP 79
Query: 323 LTNLESINLSFTGISDGSLRKL 344
L NL S++L ++ + KL
Sbjct: 80 LQNLRSLSLESCRVTASEMDKL 101
>gi|328950290|ref|YP_004367625.1| hypothetical protein Marky_0765 [Marinithermus hydrothermalis DSM
14884]
gi|328450614|gb|AEB11515.1| hypothetical protein Marky_0765 [Marinithermus hydrothermalis DSM
14884]
Length = 462
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 177/383 (46%), Gaps = 61/383 (15%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
+L+++DL G+ + D L L + L+ LD +I+D L L+NLT L
Sbjct: 81 EHAVNLVTLDLKGNRIAD--LTPLAELRYLEELDL-VSNRITD-----LAPLANLTRLKR 132
Query: 114 RR--NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDS 171
NN + Q ++ AGL L +L + R+ L L L +L L + W N +TD
Sbjct: 133 LHLGNNQV--QSLEPLAGLTQLTELRIGN-NRV-ADLAPLADLGRLAVL-VAWRNAVTD- 186
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
++PL+ LT ++ L ++ ++VTD L L+ L L
Sbjct: 187 -LQPLANLTRMRVLSLASNRVTD--------------------------LTPLAELAQLD 219
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
L L+ Q++D + + LKVL+L FN IT L L L L L LD+ I D
Sbjct: 220 TLFLSENQIAD--LAPLAGLTQLKVLSLDFNRITH--LDPLARLVELTELGLDANQIAD- 274
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
L L GL NL+ L S+ ++ L L GL LE + L+F I D S L GL +LK
Sbjct: 275 -LTPLAGLTNLQVLSASENRIAD--LTPLGGLVRLEQLGLNFNRIRDIS--ALEGLKALK 329
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
L L+ QI + LA L LT L L L RI D L NL LE+ +TD
Sbjct: 330 VLELEGNQIVN--LAPLAGLTELRVLVLGQNRIAD--LTPLGALVNLVQLEVSRNEITDL 385
Query: 412 G----LTGLVSLNVSNSRITSAG 430
G L LV +++ +R+T+ G
Sbjct: 386 GALAQLENLVRVSLVRNRVTNLG 408
>gi|320165725|gb|EFW42624.1| hypothetical protein CAOG_07756 [Capsaspora owczarzaki ATCC 30864]
Length = 880
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 174/417 (41%), Gaps = 57/417 (13%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
+N+ W+ I S + L+ LI L+ LD N QI+
Sbjct: 234 LNNNWLSAIPSSAFTGLT-----------ALIQLR-------LDTN---QITTVPANAFS 272
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVNLKGLMKLESLN 161
GL+ L L + NN IT AF+G LV+L L + T I L GL L L
Sbjct: 273 GLTALIYL-YLYNNQITTVATNAFSGPTALVQLQLYGNQITTIPSSA--LTGLSALTQLY 329
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL---EGCPVTA 218
+ + N IT SGLT L L++S + +T GL KLT L+L + + A
Sbjct: 330 L-YNNQITSVPANGFSGLTALTDLRLSNNTITSILANAFTGLTKLTYLDLSLNQLTSIPA 388
Query: 219 ACLDSLSALG---------------------SLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
L+AL +L YL LN Q++ F+ + +L L
Sbjct: 389 GAFSGLTALTQLLLFNNWLSAVPSSAFTGLTALIYLYLNNNQITTVAANAFTGLTALVQL 448
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGL 317
L N+IT GL+ L L L S I + TGL +L LELS+ Q+ S
Sbjct: 449 QLYGNQITTIPASAFAGLSALVQLYLYSNRITAIFVNAFTGLTHLSLLELSNNQITSLPA 508
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
+GLT + ++L +S GL++L++L L QIT A T LT L L
Sbjct: 509 NAFAGLTAMTQLSLYNNSLSAVPSSAFTGLTALQALYLYNNQITTVAANAFTGLTALVQL 568
Query: 378 DLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITS 428
L+ +IT A+ L L + +T LT L L++SN++ITS
Sbjct: 569 HLYRNQITTIPASAFAGLSALVQLYLNSNRITTIFANAFPSLTKLTYLDISNNQITS 625
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 190/447 (42%), Gaps = 31/447 (6%)
Query: 25 LEAFRDCALQDLCLGQYPGVNDKWMDVIASQG----SSLLSVDLSGSDVTD--------- 71
L A A L Y +N+ + +A+ ++L+ + L G+ +T
Sbjct: 407 LSAVPSSAFTGLTALIYLYLNNNQITTVAANAFTGLTALVQLQLYGNQITTIPASAFAGL 466
Query: 72 SGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLI 131
S L+ L SN +I+ + GL++L+ L NN IT+ AFAGL
Sbjct: 467 SALVQLYLYSN----------RITAIFVNAFTGLTHLSLLELS-NNQITSLPANAFAGLT 515
Query: 132 NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK 191
+ +L L + GL L++L + + N IT +GLT L L + ++
Sbjct: 516 AMTQLSLYNNSLSAVPSSAFTGLTALQALYL-YNNQITTVAANAFTGLTALVQLHLYRNQ 574
Query: 192 VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI 251
+T + GL L L L +T ++ +L L YL+++ Q++ F+ +
Sbjct: 575 ITTIPASAFAGLSALVQLYLNSNRITTIFANAFPSLTKLTYLDISNNQITSLPANAFTGL 634
Query: 252 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ 311
++ L+L N + GLT L++L L + I T L L L+L
Sbjct: 635 TAMTQLHLYNNLFSTVPSSAFTGLTALQALFLFNNQISSVAANAFTSLTALIQLQLYGNL 694
Query: 312 VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 371
+ + SGL+ L + L +S GL++L L LD QIT A + L
Sbjct: 695 ITTIPAGAFSGLSKLNLLQLYNNWLSAIPSSAFTGLTALTQLRLDTNQITTVPANAFSGL 754
Query: 372 TGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSR 425
T L +L L+G +IT A+ L++L + +T AGLT L L++S+S+
Sbjct: 755 TALIYLSLYGNQITTISASAFAGLTALQALYLNDNTITTIAANAFAGLTALNWLDLSDSQ 814
Query: 426 ITSAGLRHLKPLKNLRSLTLESCKVTA 452
ITS L L L L + ++A
Sbjct: 815 ITSIPANVFSSLPALAQLNLYNNWLSA 841
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 160/366 (43%), Gaps = 8/366 (2%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
QI+ GL+ L L + NN I + AF+GL L L L I
Sbjct: 142 QITTVPSSAFTGLTALQIL-YLHNNQIATVAINAFSGLTALQTLYLYNNQIITVATNAFS 200
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
GL L+ L + N IT SGL+ L +LQ++ + ++ + GL L L L+
Sbjct: 201 GLAALQVLRLD-TNQITTVPANAFSGLSKLNTLQLNNNWLSAIPSSAFTGLTALIQLRLD 259
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
+T ++ S L +L YL L Q++ FS +L L L N+IT L
Sbjct: 260 TNQITTVPANAFSGLTALIYLYLYNNQITTVATNAFSGPTALVQLQLYGNQITTIPSSAL 319
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
GL+ L L L + I +GL L L LS+ + S +GLT L ++LS
Sbjct: 320 TGLSALTQLYLYNNQITSVPANGFSGLTALTDLRLSNNTITSILANAFTGLTKLTYLDLS 379
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
++ +GL++L L L ++ +A T LT L +L L +IT A
Sbjct: 380 LNQLTSIPAGAFSGLTALTQLLLFNNWLSAVPSSAFTGLTALIYLYLNNNQITTVAANAF 439
Query: 393 RNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
L L++ G +T AGL+ LV L + ++RIT+ + L +L L L
Sbjct: 440 TGLTALVQLQLYGNQITTIPASAFAGLSALVQLYLYSNRITAIFVNAFTGLTHLSLLELS 499
Query: 447 SCKVTA 452
+ ++T+
Sbjct: 500 NNQITS 505
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 136/334 (40%), Gaps = 14/334 (4%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVN 150
QI+ GL+ L L RN IT AFAGL LV+L L R T I
Sbjct: 550 QITTVAANAFTGLTALVQLHLYRNQ-ITTIPASAFAGLSALVQLYLNSNRITTIFANA-- 606
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS---CSKVTDSGIAYLKGLQKLT 207
L KL L+I N IT +GLT + L + S V S L LQ L
Sbjct: 607 FPSLTKLTYLDIS-NNQITSLPANAFTGLTAMTQLHLYNNLFSTVPSSAFTGLTALQALF 665
Query: 208 LLNLEGCPVTAACLDSLSALGSL-FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
L N + V A SL+AL L Y NL ++ FS + L +L L N ++
Sbjct: 666 LFNNQISSVAANAFTSLTALIQLQLYGNL----ITTIPAGAFSGLSKLNLLQLYNNWLSA 721
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
GLT L L LD+ I +GL L L L Q+ + +GLT L
Sbjct: 722 IPSSAFTGLTALTQLRLDTNQITTVPANAFSGLTALIYLSLYGNQITTISASAFAGLTAL 781
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
+++ L+ I+ + AGL++L L+L QIT +SL L L+L+ ++
Sbjct: 782 QALYLNDNTITTIAANAFAGLTALNWLDLSDSQITSIPANVFSSLPALAQLNLYNNWLSA 841
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLN 420
+ L L + G +T LN
Sbjct: 842 VPTSAFTGLTALTQLTMYGNRITTISANAFTGLN 875
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 161/391 (41%), Gaps = 36/391 (9%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLV--KLDLERCTRIHGGLVN 150
QI+ GLS L +L NN ++A AF GL L+ +LD + T +
Sbjct: 214 QITTVPANAFSGLSKLNTLQLN-NNWLSAIPSSAFTGLTALIQLRLDTNQITTVPANA-- 270
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
GL L L + + N IT SG T L LQ+ +++T + L GL LT L
Sbjct: 271 FSGLTALIYLYL-YNNQITTVATNAFSGPTALVQLQLYGNQITTIPSSALTGLSALTQLY 329
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
L +T+ + S L +L L L+ ++ F+ + L L+L N++T
Sbjct: 330 LYNNQITSVPANGFSGLTALTDLRLSNNTITSILANAFTGLTKLTYLDLSLNQLTSIPAG 389
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
GLT L L L + + TGL L L L++ Q+ + +GLT L +
Sbjct: 390 AFSGLTALTQLLLFNNWLSAVPSSAFTGLTALIYLYLNNNQITTVAANAFTGLTALVQLQ 449
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITD------TGLA------------------ 366
L I+ AGLS+L L L + +IT TGL
Sbjct: 450 LYGNQITTIPASAFAGLSALVQLYLYSNRITAIFVNAFTGLTHLSLLELSNNQITSLPAN 509
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA------GLTGLVSLN 420
A LT +T L L+ ++ ++ L++L + +T GLT LV L+
Sbjct: 510 AFAGLTAMTQLSLYNNSLSAVPSSAFTGLTALQALYLYNNQITTVAANAFTGLTALVQLH 569
Query: 421 VSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
+ ++IT+ L L L L S ++T
Sbjct: 570 LYRNQITTIPASAFAGLSALVQLYLNSNRIT 600
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 139/334 (41%), Gaps = 37/334 (11%)
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
G+ T+ + ++N IT+ AF GL L + L+
Sbjct: 56 GIPATTTTLYLQSNQITSISSSAFTGLTALTYMRLD------------------------ 91
Query: 164 WCNCITDSDMKPLSGLTNLKSLQIS---CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC 220
N IT SGL+ L +LQ++ S + S L L +L L N + V ++
Sbjct: 92 -TNQITTVPANAFSGLSTLNTLQLNNNWLSAIPSSAFTGLTALIQLLLNNNQITTVPSSA 150
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
L+AL L+ L+ Q++ FS + +L+ L L N+I GL L+
Sbjct: 151 FTGLTALQILY---LHNNQIATVAINAFSGLTALQTLYLYNNQIITVATNAFSGLAALQV 207
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
L LD+ I +GL L L+L++ + + +GLT L + L I+
Sbjct: 208 LRLDTNQITTVPANAFSGLSKLNTLQLNNNWLSAIPSSAFTGLTALIQLRLDTNQITTVP 267
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRS 400
+GL++L L L QIT A + T L L L+G +IT ++ L L
Sbjct: 268 ANAFSGLTALIYLYLYNNQITTVATNAFSGPTALVQLQLYGNQITTIPSSALTGLSALTQ 327
Query: 401 LEICGGGLTD------AGLTGLVSLNVSNSRITS 428
L + +T +GLT L L +SN+ ITS
Sbjct: 328 LYLYNNQITSVPANGFSGLTALTDLRLSNNTITS 361
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 117/277 (42%), Gaps = 3/277 (1%)
Query: 103 RGLSNLTSLSFR--RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL 160
+LT L++ NN IT+ AF GL + +L L GL L++L
Sbjct: 605 NAFPSLTKLTYLDISNNQITSLPANAFTGLTAMTQLHLYNNLFSTVPSSAFTGLTALQAL 664
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC 220
+ N I+ + LT L LQ+ + +T GL KL LL L ++A
Sbjct: 665 -FLFNNQISSVAANAFTSLTALIQLQLYGNLITTIPAGAFSGLSKLNLLQLYNNWLSAIP 723
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
+ + L +L L L+ Q++ FS + +L L+L N+IT GLT L++
Sbjct: 724 SSAFTGLTALTQLRLDTNQITTVPANAFSGLTALIYLSLYGNQITTISASAFAGLTALQA 783
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
L L+ I GL L L+LSD+Q+ S S L L +NL +S
Sbjct: 784 LYLNDNTITTIAANAFAGLTALNWLDLSDSQITSIPANVFSSLPALAQLNLYNNWLSAVP 843
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
GL++L L + +IT A T L L L
Sbjct: 844 TSAFTGLTALTQLTMYGNRITTISANAFTGLNALVQL 880
>gi|320165727|gb|EFW42626.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 553
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 174/401 (43%), Gaps = 41/401 (10%)
Query: 85 SLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI 144
SL N IS GL+ LT+L F NN + + A AGL L L L+R
Sbjct: 60 SLQGNLLTSISANAFT---GLTALTTL-FLENNQLPSISANALAGLTALQYLSLQRNQLT 115
Query: 145 HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQ 204
GL L LN+ + N L+GLT +++L + + +T L
Sbjct: 116 SISANTFTGLTALTGLNLDF-NQFASISADTLAGLTTMRTLSLGSNGITSISANAFTSLT 174
Query: 205 KLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI 264
LT+L+L + + D+L+ L ++ L+L R QL+ F+ + +L L+L +NE+
Sbjct: 175 ALTVLDLSYNELPSISADALTGLTAMRTLSLQRNQLTSISANTFTGLTALTGLDLSYNEL 234
Query: 265 TDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLT 324
L GLT L+ L+L++ I TGL L L L+ Q+ + L+GLT
Sbjct: 235 PSISANALTGLTALQYLSLNNNRITRISANTFTGLTALTTLYLNYNQLPNISANALTGLT 294
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI 384
L S++L+ I+ AGL++L SL L Q++ ALT LT L +L L RI
Sbjct: 295 ALRSLSLTQNNITTIHANAFAGLTALASLVLVQNQLSSISADALTGLTALQYLSLNNNRI 354
Query: 385 TDSGAAYLRNFKNLRSLEICG--------------GGLTD-------------------A 411
T A F L +L + GLT A
Sbjct: 355 TRISA---NAFTGLTALTVLYLSYNELPSISANALAGLTALQYLSLNNNQITSIAAAAFA 411
Query: 412 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
GLT L L + N++ITS L L+ L+L S ++T+
Sbjct: 412 GLTALTHLPLDNNQITSISAEAFTGLSALQLLSLNSNQITS 452
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 161/372 (43%), Gaps = 11/372 (2%)
Query: 86 LDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIH 145
LDFN IS + L GL+ + +LS N IT+ AF L L LDL
Sbjct: 133 LDFNQFASISA---DTLAGLTTMRTLSLGSN-GITSISANAFTSLTALTVLDLSYNELPS 188
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
L GL + +L+++ N +T +GLT L L +S +++ L GL
Sbjct: 189 ISADALTGLTAMRTLSLQR-NQLTSISANTFTGLTALTGLDLSYNELPSISANALTGLTA 247
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
L L+L +T ++ + L +L L LN QL + + + +L+ L+L N IT
Sbjct: 248 LQYLSLNNNRITRISANTFTGLTALTTLYLNYNQLPNISANALTGLTALRSLSLTQNNIT 307
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
GLT L SL L + LTGL L+ L L++ ++ +GLT
Sbjct: 308 TIHANAFAGLTALASLVLVQNQLSSISADALTGLTALQYLSLNNNRITRISANAFTGLTA 367
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L + LS+ + S LAGL++L+ L+L+ QIT AA LT LTHL L +IT
Sbjct: 368 LTVLYLSYNELPSISANALAGLTALQYLSLNNNQITSIAAAAFAGLTALTHLPLDNNQIT 427
Query: 386 DSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKN 439
A L+ L + +T GL L SL ++ + I L
Sbjct: 428 SISAEAFTGLSALQLLSLNSNQITSIAANAFTGLNALTSLYLNQNNIAGISANAFTGLTK 487
Query: 440 LRSLTLESCKVT 451
L L L+ T
Sbjct: 488 LTQLYLDDNPFT 499
>gi|218960535|ref|YP_001740310.1| putative Phosphoprotein phosphatase [Candidatus Cloacamonas
acidaminovorans]
gi|167729192|emb|CAO80103.1| putative Phosphoprotein phosphatase [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 3445
Score = 99.8 bits (247), Expect = 3e-18, Method: Composition-based stats.
Identities = 103/302 (34%), Positives = 158/302 (52%), Gaps = 49/302 (16%)
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
L L+SL++ N I SD+ PL+GLTNL+ L + ++++D
Sbjct: 2943 LTNLQSLDLD-SNQI--SDLSPLAGLTNLQELYLYYNQISD------------------- 2980
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
L L+ L +L YL+L Q+SD + + +L+ L L +N+I D L L
Sbjct: 2981 -------LSPLAELTNLQYLDLGGNQISD--LSPLAGLNNLQELYLYWNQIGD--LSPLA 3029
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
GLTNL+ L+L S I D L L L NL L+LS Q+ S L L+GLTNL+ + L +
Sbjct: 3030 GLTNLQELDLYSNQISD--LSPLAELTNLWYLDLSYNQI--SDLSPLAGLTNLQDLYLGW 3085
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
I+ L LAGL++L+ LNL + QI+D L+ L LT L +L L+ +I+D + L
Sbjct: 3086 NQIN--YLSPLAGLTNLQVLNLYSNQISD--LSPLAELTNLQYLHLYYNQISD--LSPLT 3139
Query: 394 NFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
NL L + ++D GLT L L++ ++I+ + L L NL+ L L+S +
Sbjct: 3140 GLTNLHYLYLAYNQISDLSPLIGLTNLQYLHLYYNQISD--ISPLAELTNLQYLWLDSNQ 3197
Query: 450 VT 451
++
Sbjct: 3198 IS 3199
Score = 93.6 bits (231), Expect = 2e-16, Method: Composition-based stats.
Identities = 101/265 (38%), Positives = 140/265 (52%), Gaps = 23/265 (8%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
L +NLQ LD QISD L L GL+NL L N + AGL NL +L
Sbjct: 2353 LAGLTNLQYLDLG-GNQISD--LSPLAGLTNLQDLYLGWNQI---NYLSPLAGLTNLQEL 2406
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG 196
DL +I + L GL L+ L + + N I SD+ PLSGLTNL+ L + +++ S
Sbjct: 2407 DLNN-NQI-SNINPLAGLTNLQKLYLYY-NQI--SDLSPLSGLTNLQYLLLEYNQI--SN 2459
Query: 197 IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 256
I+ L GL L +L+L ++ L L+ L +L+YL+L+ Q+SD + +L+
Sbjct: 2460 ISPLAGLTNLQVLDLYSNQISD--LSPLAELTNLWYLDLSYNQISD--LSPLVGLVNLQG 2515
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
L L N+I D L L GLTNL+ L+L I D L LTGL NL L L+ Q+ S
Sbjct: 2516 LWLDNNQIND--LSPLIGLTNLQYLHLYYNQISD--LSPLTGLTNLHYLYLAYNQI--SD 2569
Query: 317 LRHLSGLTNLESINLSFTGISDGSL 341
L + GLTNL+ + L + IS S+
Sbjct: 2570 LSSVEGLTNLQELYLDYNPISYESM 2594
Score = 90.5 bits (223), Expect = 2e-15, Method: Composition-based stats.
Identities = 83/230 (36%), Positives = 130/230 (56%), Gaps = 19/230 (8%)
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
+++++G L +L + + SD+ PL+GL NL+ L + ++++D I+ L GL L
Sbjct: 1089 IISIEGAQYLTNLQVMYLYSNQISDLSPLAGLANLQELLLYANQISD--ISPLAGLNNLQ 1146
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
L L+ ++ L L+ L +L L L Q+SD + + +L+VL+L N+I+
Sbjct: 1147 YLLLQYNQISD--LSPLAGLTNLQNLILAYNQISD--ISPLAGLTNLQVLDLYSNQIS-- 1200
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
L L GLTNL+ L L S I D L L G+ NL+ + L + Q+ S L L+GLTNL+
Sbjct: 1201 YLSPLAGLTNLQELYLHSNQISD--LSPLAGMTNLRVINLKNNQI--SDLSPLAGLTNLQ 1256
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
+ L + I+D + LAGL++L SLNL QI+D L+ L GLT+L
Sbjct: 1257 YLLLGWNKIND--ISPLAGLTNLWSLNLSYNQISD-----LSPLAGLTNL 1299
Score = 89.4 bits (220), Expect = 4e-15, Method: Composition-based stats.
Identities = 123/384 (32%), Positives = 176/384 (45%), Gaps = 93/384 (24%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLER 140
+NLQSLD + QISD L L GL+NL L N + AGL NL LDL
Sbjct: 2313 TNLQSLDLD-SNQISD--LSPLAGLTNLLELYLLDN---MINYLSPLAGLTNLQYLDL-- 2364
Query: 141 CTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYL 200
GG N I SD+ PL+GLTNL+ L + +++
Sbjct: 2365 -----GG------------------NQI--SDLSPLAGLTNLQDLYLGWNQIN------- 2392
Query: 201 KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG 260
L L+ L +L L+LN Q+S+ + + +L+ L L
Sbjct: 2393 -------------------YLSPLAGLTNLQELDLNNNQISN--INPLAGLTNLQKLYLY 2431
Query: 261 FNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
+N+I+D L L GLTNL+ L L+ I + + L GL NL+ L+L Q+ S L L
Sbjct: 2432 YNQISD--LSPLSGLTNLQYLLLEYNQISN--ISPLAGLTNLQVLDLYSNQI--SDLSPL 2485
Query: 321 SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
+ LTNL ++LS+ ISD L L GL +L+ L LD QI D L+ L LT L +L L+
Sbjct: 2486 AELTNLWYLDLSYNQISD--LSPLVGLVNLQGLWLDNNQIND--LSPLIGLTNLQYLHLY 2541
Query: 381 GARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNL 440
+I+D L L GLT L L ++ ++I+ L ++ L NL
Sbjct: 2542 YNQISD-----------LSPL---------TGLTNLHYLYLAYNQISD--LSSVEGLTNL 2579
Query: 441 RSLTLESCKVTANDIKRLQSRDLP 464
+ L L+ ++ + QS LP
Sbjct: 2580 QELYLDYNPISYESMLLAQSWSLP 2603
Score = 75.9 bits (185), Expect = 5e-11, Method: Composition-based stats.
Identities = 100/304 (32%), Positives = 149/304 (49%), Gaps = 44/304 (14%)
Query: 169 TDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG 228
T +D++ L+G N I ++ G YL LQ + L + + + L L+ L
Sbjct: 1071 TIADLQGLTGTLNAWDRNI----ISIEGAQYLTNLQVMYLYSNQ-----ISDLSPLAGLA 1121
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
+L L L Q+SD + + +L+ L L +N+I+D L L GLTNL++L L I
Sbjct: 1122 NLQELLLYANQISD--ISPLAGLNNLQYLLLQYNQISD--LSPLAGLTNLQNLILAYNQI 1177
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
D + L GL NL+ L+L Q+ S L L+GLTNL+ + L ISD L LAG++
Sbjct: 1178 SD--ISPLAGLTNLQVLDLYSNQI--SYLSPLAGLTNLQELYLHSNQISD--LSPLAGMT 1231
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL 408
+L+ +NL QI+D L+ L LT L +L L +I D
Sbjct: 1232 NLRVINLKNNQISD--LSPLAGLTNLQYLLLGWNKINDISPL------------------ 1271
Query: 409 TDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLP-NLV 467
AGLT L SLN+S ++I+ L L L NL L L++ ++ + QS LP +
Sbjct: 1272 --AGLTNLWSLNLSYNQISD--LSPLAGLTNLWYLYLDNNPISYESMLLSQSWALPWSTS 1327
Query: 468 SFRP 471
S+ P
Sbjct: 1328 SYNP 1331
Score = 71.6 bits (174), Expect = 9e-10, Method: Composition-based stats.
Identities = 84/258 (32%), Positives = 130/258 (50%), Gaps = 39/258 (15%)
Query: 57 SSLLSVDLSGSDVTD----SGLIHLKDC----------------SNLQSLDFNFCIQISD 96
++L +DL G+ ++D +GL +L+D +NLQ LD N QIS+
Sbjct: 2357 TNLQYLDLGGNQISDLSPLAGLTNLQDLYLGWNQINYLSPLAGLTNLQELDLNNN-QISN 2415
Query: 97 GGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMK 156
+ L GL+NL L N + +GL NL L LE +I + L GL
Sbjct: 2416 --INPLAGLTNLQKLYLYYNQI---SDLSPLSGLTNLQYLLLEY-NQI-SNISPLAGLTN 2468
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV 216
L+ L++ + N I SD+ PL+ LTNL L +S ++++D ++ L GL L L L+ +
Sbjct: 2469 LQVLDL-YSNQI--SDLSPLAELTNLWYLDLSYNQISD--LSPLVGLVNLQGLWLDNNQI 2523
Query: 217 TAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT 276
L L L +L YL+L Q+SD + + +L L L +N+I+D L ++GLT
Sbjct: 2524 ND--LSPLIGLTNLQYLHLYYNQISD--LSPLTGLTNLHYLYLAYNQISD--LSSVEGLT 2577
Query: 277 NLESLNLDSCGIGDEGLV 294
NL+ L LD I E ++
Sbjct: 2578 NLQELYLDYNPISYESML 2595
Score = 68.9 bits (167), Expect = 5e-09, Method: Composition-based stats.
Identities = 69/239 (28%), Positives = 120/239 (50%), Gaps = 38/239 (15%)
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
+++++G +L+ + + S++ PL+GLTNLK L + ++++D I L GL ++
Sbjct: 1694 IISIEGAQYFTNLDSLYLSYNQISNLNPLAGLTNLKGLNLGSNQISD--INPLAGLTNIS 1751
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
L L G ++ +++ L L+ +L+ L L +N+I+D
Sbjct: 1752 WLFLFGNYIS-----NIAPLEGLY---------------------NLRNLQLHYNQISD- 1784
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
+ L L ++ + L S I D + L GL +L LEL Q+ + + LSGL NL+
Sbjct: 1785 -ITPLAALIDIGGIALGSNQIVD--ITPLAGLTHLIGLELYHNQI--NNIDALSGLINLQ 1839
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
+ L I D + LAGLS L+ L L+ QI D ++ L+ L L +L L+ +I+D
Sbjct: 1840 WLYLDGNQIID--ISPLAGLSILRELYLENNQIND--ISTLSELNNLQYLFLYNNQISD 1894
Score = 46.2 bits (108), Expect = 0.041, Method: Composition-based stats.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 57/255 (22%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI 92
LQDL LG + +N ++ +A ++L +DL+ + + S + L +NLQ L + +
Sbjct: 2381 LQDLYLG-WNQIN--YLSPLAGL-TNLQELDLNNNQI--SNINPLAGLTNLQKL-YLYYN 2433
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL-----------ERC 141
QISD L L GL+NL L N + AGL NL LDL
Sbjct: 2434 QISD--LSPLSGLTNLQYLLLEYNQI---SNISPLAGLTNLQVLDLYSNQISDLSPLAEL 2488
Query: 142 TRI------HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDS 195
T + + + +L L+ L +L W + +D+ PL GLTNL+ L + ++++D
Sbjct: 2489 TNLWYLDLSYNQISDLSPLVGLVNLQGLWLDNNQINDLSPLIGLTNLQYLHLYYNQISD- 2547
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 255
L L+ L +L YL L Q+SD + +L+
Sbjct: 2548 -------------------------LSPLTGLTNLHYLYLAYNQISD--LSSVEGLTNLQ 2580
Query: 256 VLNLGFNEITDECLV 270
L L +N I+ E ++
Sbjct: 2581 ELYLDYNPISYESML 2595
Score = 45.8 bits (107), Expect = 0.045, Method: Composition-based stats.
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 17/148 (11%)
Query: 308 SDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAA 367
SD Q + L+ L+G NL G + S+ L++L+SL+LD+ QI+D L+
Sbjct: 2911 SDYQPTIADLQGLAG-------NLHADGRNIISIEGAQYLTNLQSLDLDSNQISD--LSP 2961
Query: 368 LTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSN 423
L LT L L L+ +I+D + L NL+ L++ G ++D AGL L L +
Sbjct: 2962 LAGLTNLQELYLYYNQISD--LSPLAELTNLQYLDLGGNQISDLSPLAGLNNLQELYLYW 3019
Query: 424 SRITSAGLRHLKPLKNLRSLTLESCKVT 451
++I L L L NL+ L L S +++
Sbjct: 3020 NQI--GDLSPLAGLTNLQELDLYSNQIS 3045
Score = 41.6 bits (96), Expect = 0.78, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 35/162 (21%)
Query: 308 SDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG--- 364
SD Q + L+ L+G NL G + S+ L++L+SL+LD+ QI+D
Sbjct: 2280 SDYQPTIADLQGLAG-------NLHADGRNIISIEGAQYLTNLQSLDLDSNQISDLSPLA 2332
Query: 365 -----------------LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGG 407
L+ L LT L +LDL G +I+D + L NL+ L +
Sbjct: 2333 GLTNLLELYLLDNMINYLSPLAGLTNLQYLDLGGNQISD--LSPLAGLTNLQDLYLGWNQ 2390
Query: 408 LTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
+ AGLT L L+++N++I++ + L L NL+ L L
Sbjct: 2391 INYLSPLAGLTNLQELDLNNNQISN--INPLAGLTNLQKLYL 2430
Score = 40.8 bits (94), Expect = 1.6, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L +DL + + S L L +NLQ L + QISD L L G++NL ++ + N
Sbjct: 1187 TNLQVLDLYSNQI--SYLSPLAGLTNLQEL-YLHSNQISD--LSPLAGMTNLRVINLK-N 1240
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N I+ + AGL NL L L +I+ + L GL L SLN+ + N I SD+ PL
Sbjct: 1241 NQIS--DLSPLAGLTNLQYL-LLGWNKIND-ISPLAGLTNLWSLNLSY-NQI--SDLSPL 1293
Query: 177 SGLTNL 182
+GLTNL
Sbjct: 1294 AGLTNL 1299
Score = 38.9 bits (89), Expect = 5.5, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 21/168 (12%)
Query: 72 SGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLI 131
S + L+ NL++L ++ QISD + L L ++ ++ N + + AGL
Sbjct: 1761 SNIAPLEGLYNLRNLQLHYN-QISD--ITPLAALIDIGGIALGSNQIVD---ITPLAGLT 1814
Query: 132 NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDS--DMKPLSGLTNLKSLQISC 189
+L+ L+L H + N+ L L +N++W + D+ PL+GL+ L+ L +
Sbjct: 1815 HLIGLEL-----YHNQINNIDALSGL--INLQWLYLDGNQIIDISPLAGLSILRELYLEN 1867
Query: 190 SKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+++ D S ++ L LQ L L N + + L L+ L +L++L L+
Sbjct: 1868 NQINDISTLSELNNLQYLFLYNNQ-----ISDLSPLAGLTNLWWLLLD 1910
>gi|344169683|emb|CCA82044.1| putative leucine-rich-repeat type III effector protein (GALA1-like)
[blood disease bacterium R229]
Length = 590
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 186/414 (44%), Gaps = 18/414 (4%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC-IQISDGGLEHLRGLSNLTSLSFRR 115
++L + LSG DVTD L L ++L++LD + C QI+ G+ HL L L L+
Sbjct: 121 AALEKLTLSG-DVTDDDLKGLP--ASLKALDLSDCRAQITSEGIAHLSKLP-LVRLNVSH 176
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
N I A+G + A + L +LD+ G L L LN+ N I D +
Sbjct: 177 NR-IDAEGARLLAAMPTLTELDISHNDIRADGAQALADSATLTLLNVG-NNRIGDRGAQA 234
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L+ T L SL S + + +G+ L L L+L P+ +L+ +L LN+
Sbjct: 235 LAANTKLTSLNASANGIGSAGVQALAANATLAALDLSCTPIDEESAQALARNTTLTSLNV 294
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
+L D G + +L LN+ NEI E L T+L SL++ +G +G
Sbjct: 295 RLSRLGDAGARALAATTTLTSLNVSLNEIGPEGAKALANNTSLTSLDIGGNKVGVDGAQA 354
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L L L + ++ +G + L+ T L S+++S G+ R +L SL +
Sbjct: 355 LATSMTLTSLVIHRNRIEVAGAQALANNTRLTSLDISDNGLGVWGARAFVDNETLTSLRI 414
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL-- 413
I D G L T LT LD+ RI ++GA L L SL I G + G+
Sbjct: 415 ATNMIGDEGAKWLARNTTLTSLDIGENRIGETGAQALAGNTKLTSLNISGNAIGMMGVLR 474
Query: 414 ----TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDL 463
T L +LNVS ++I AG + L R+ TL S V N+I +R L
Sbjct: 475 LARNTTLAALNVSRNQIGVAGAQDLA-----RNTTLRSLVVNYNEIGNEGARAL 523
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 118/252 (46%), Gaps = 3/252 (1%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L S+++S +++ G L + ++L SLD ++ G + L LTSL RN
Sbjct: 311 TTLTSLNVSLNEIGPEGAKALANNTSLTSLDIGGN-KVGVDGAQALATSMTLTSLVIHRN 369
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
I G +A A L LD+ G L SL I N I D K L
Sbjct: 370 R-IEVAGAQALANNTRLTSLDISDNGLGVWGARAFVDNETLTSLRIA-TNMIGDEGAKWL 427
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+ T L SL I +++ ++G L G KLT LN+ G + + L+ +L LN++
Sbjct: 428 ARNTTLTSLDIGENRIGETGAQALAGNTKLTSLNISGNAIGMMGVLRLARNTTLAALNVS 487
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
R Q+ G + ++ +L+ L + +NEI +E L G L SL++ C IGDEG L
Sbjct: 488 RNQIGVAGAQDLARNTTLRSLVVNYNEIGNEGARALAGNKTLVSLSVVDCRIGDEGAHAL 547
Query: 297 TGLCNLKCLELS 308
L L++S
Sbjct: 548 AANTTLALLDVS 559
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 175/383 (45%), Gaps = 12/383 (3%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
+L +D+S +D+ G L D + L L+ +I D G + L + LTSL+ N
Sbjct: 192 TLTELDISHNDIRADGAQALADSATLTLLNVGNN-RIGDRGAQALAANTKLTSLNASAN- 249
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
I + G++A A L LDL CT I L L SLN++ + D+ + L
Sbjct: 250 GIGSAGVQALAANATLAALDLS-CTPIDEESAQALARNTTLTSLNVRLSR-LGDAGARAL 307
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+ T L SL +S +++ G L LT L++ G V +L+ +L L ++
Sbjct: 308 AATTTLTSLNVSLNEIGPEGAKALANNTSLTSLDIGGNKVGVDGAQALATSMTLTSLVIH 367
Query: 237 RCQLSDDGCEKFS---KIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
R ++ G + + ++ SL + + G V + LT SL + + IGDEG
Sbjct: 368 RNRIEVAGAQALANNTRLTSLDISDNGLGVWGARAFVDNETLT---SLRIATNMIGDEGA 424
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
L L L++ + ++G +G + L+G T L S+N+S I + +LA ++L +L
Sbjct: 425 KWLARNTTLTSLDIGENRIGETGAQALAGNTKLTSLNISGNAIGMMGVLRLARNTTLAAL 484
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL 413
N+ QI G L T L L + I + GA L K L SL + + D G
Sbjct: 485 NVSRNQIGVAGAQDLARNTTLRSLVVNYNEIGNEGARALAGNKTLVSLSVVDCRIGDEGA 544
Query: 414 TGLVSLNVSNSRITSAGLRHLKP 436
L + N + + + + RH++P
Sbjct: 545 HALAA-NTTLALLDVSLNRHIRP 566
>gi|443729605|gb|ELU15470.1| hypothetical protein CAPTEDRAFT_224593 [Capitella teleta]
Length = 858
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 184/393 (46%), Gaps = 44/393 (11%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLS 61
LP ++++ + +L+ + L +L F LQ L L YP ++ + I + L
Sbjct: 444 LPANVAEGLLKQLMKEKLLRPKTLHPFIPSHLQTLLLDYYPYATNELLHEIRLH-NCLAH 502
Query: 62 VDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
+ L S +TD GL + L+ L+ C Q++D L +R L NL L + ++
Sbjct: 503 LSLKACSLITDRGLQDISSLKRLKVLNLAACTQLTDNCLPLVRELPNLQVLILE-STGVS 561
Query: 121 AQGMKAF--AGLINLVKLDLERCTRIHGGLVNL-KGLMKLESLNIKWCNCITDSDMKPLS 177
+GM+ L +LV LDL + T++ + NL K KL LN++ S++ LS
Sbjct: 562 DRGMQELFHQPLTSLVNLDLSK-TQVTHRIFNLAKNAPKLSHLNLE------QSEVASLS 614
Query: 178 GLTNL--KSLQISCSK-VTDS---------------------GIAYLKGLQKLTLLNLEG 213
G+ L +SL +S +K VTDS G L+ LQ L LL
Sbjct: 615 GVKELCLQSLNLSHTKIVTDSLLCLSGCDIRALNISNTPNIEGDLGLEYLQSLKLLQHLS 674
Query: 214 CPVTAACLD---SLSALGSLFYLNL-NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
P + D + L L+L N + DDG KI SL+ L L +ITD L
Sbjct: 675 LPSRLSLSDHGLQFTTAMPLVLLDLTNYLNVGDDGMRHIGKITSLRRLLLCNTKITDGGL 734
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH--LSGLTNLE 327
+ L+GL NLE ++LD I DEG + L+ L L++T + ++ L H L+ L
Sbjct: 735 LFLRGLVNLEEISLDRTAITDEGACVVEAFTRLQQLSLTETGISNAFLEHQSLNPCYLLS 794
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
+NLS T ISD +R L L +L LNLD +I
Sbjct: 795 KLNLSRTAISDKGVRCLR-LPNLTLLNLDHTRI 826
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 152/350 (43%), Gaps = 79/350 (22%)
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP 215
L L++K C+ ITD ++ +S L LK L ++ C+++TD+ + ++ L L +L LE
Sbjct: 500 LAHLSLKACSLITDRGLQDISSLKRLKVLNLAACTQLTDNCLPLVRELPNLQVLILESTG 559
Query: 216 VTAACLDSL--SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
V+ + L L SL L+L++ Q++ L LNL +E+ L
Sbjct: 560 VSDRGMQELFHQPLTSLVNLDLSKTQVTHRIFNLAKNAPKLSHLNLEQSEVAS-----LS 614
Query: 274 GLTNL--ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ-------------------- 311
G+ L +SLNL I + L+ L+G C+++ L +S+T
Sbjct: 615 GVKELCLQSLNLSHTKIVTDSLLCLSG-CDIRALNISNTPNIEGDLGLEYLQSLKLLQHL 673
Query: 312 -------------------------------VGSSGLRHLSGLTNLESINLSFTGISDGS 340
VG G+RH+ +T+L + L T I+DG
Sbjct: 674 SLPSRLSLSDHGLQFTTAMPLVLLDLTNYLNVGDDGMRHIGKITSLRRLLLCNTKITDGG 733
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRS 400
L L GL +L+ ++LD ITD G + + T L L L I+++ F +S
Sbjct: 734 LLFLRGLVNLEEISLDRTAITDEGACVVEAFTRLQQLSLTETGISNA-------FLEHQS 786
Query: 401 LEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
L C L LN+S + I+ G+R L+ L NL L L+ ++
Sbjct: 787 LNPC---------YLLSKLNLSRTAISDKGVRCLR-LPNLTLLNLDHTRI 826
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 114/240 (47%), Gaps = 27/240 (11%)
Query: 230 LFYLNLNRCQL-SDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCG 287
L +L+L C L +D G + S + LKVLNL ++TD CL ++ L NL+ L L+S G
Sbjct: 500 LAHLSLKACSLITDRGLQDISSLKRLKVLNLAACTQLTDNCLPLVRELPNLQVLILESTG 559
Query: 288 IGDEGLVNL--TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
+ D G+ L L +L L+LS TQV L +NL + ++A
Sbjct: 560 VSDRGMQELFHQPLTSLVNLDLSKTQVTHRIFNLAKNAPKLSHLNLEQS--------EVA 611
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT-------DSGAAYLRNFKNL 398
LS +K L L + ++ T + SL L+ D+ I+ D G YL++ K L
Sbjct: 612 SLSGVKELCLQSLNLSHTKIVT-DSLLCLSGCDIRALNISNTPNIEGDLGLEYLQSLKLL 670
Query: 399 RSLEIC------GGGLTDAGLTGLVSLNVSNS-RITSAGLRHLKPLKNLRSLTLESCKVT 451
+ L + GL LV L+++N + G+RH+ + +LR L L + K+T
Sbjct: 671 QHLSLPSRLSLSDHGLQFTTAMPLVLLDLTNYLNVGDDGMRHIGKITSLRRLLLCNTKIT 730
>gi|254417119|ref|ZP_05030865.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196176097|gb|EDX71115.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 414
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 164/288 (56%), Gaps = 30/288 (10%)
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
+D++PLSGLTNL++L + + ++D ++ L L L ++L +T ++ LS L +L
Sbjct: 86 TDIRPLSGLTNLRTLYLGSNLISD--VSPLVELTNLKKVDLSHNQITN--VNPLSGLTNL 141
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
+L+L+R Q+++ S++ +L+ L+LG N+IT+ + L GLTNLE LNL I +
Sbjct: 142 EWLDLSRNQITN--VNPLSELTNLEWLDLGHNQITN--ISPLSGLTNLEFLNLSHNQITN 197
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
++ + L NLK + L++ Q+ + + L+ LTNL I+L+ I+ ++R L L++L
Sbjct: 198 FRII--SALINLKDIALNNNQI--TDIYPLAELTNLRRISLNNNQIT--TVRPLVQLTNL 251
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
+SL + QITD + L+ LT L L L +ITD L NL L + +TD
Sbjct: 252 ESLYIGNNQITD--IRPLSQLTNLRQLALNHNQITDIRP--LSQLTNLTGLALSHNQITD 307
Query: 411 ----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT---LESCKVT 451
+ LT L ++++ ++IT ++ PL NL +LT L S +VT
Sbjct: 308 VRPLSQLTNLEWIHLNYNQIT-----NITPLVNLNNLTGLDLHSNQVT 350
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 154/285 (54%), Gaps = 24/285 (8%)
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
SD+ PL LTNLK + +S +++T+ + L GL L L+L +T ++ LS L +L
Sbjct: 108 SDVSPLVELTNLKKVDLSHNQITN--VNPLSGLTNLEWLDLSRNQITN--VNPLSELTNL 163
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
+L+L Q+++ S + +L+ LNL N+IT+ ++ L NL+ + L++ I D
Sbjct: 164 EWLDLGHNQITN--ISPLSGLTNLEFLNLSHNQITNFRII--SALINLKDIALNNNQITD 219
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
+ L L NL+ + L++ Q+ + +R L LTNLES+ + I+D +R L+ L++L
Sbjct: 220 --IYPLAELTNLRRISLNNNQI--TTVRPLVQLTNLESLYIGNNQITD--IRPLSQLTNL 273
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
+ L L+ QITD + L+ LT LT L L +ITD L NL + + +T+
Sbjct: 274 RQLALNHNQITD--IRPLSQLTNLTGLALSHNQITD--VRPLSQLTNLEWIHLNYNQITN 329
Query: 411 ----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
L L L++ ++++T+ L LKNL+ + L ++T
Sbjct: 330 ITPLVNLNNLTGLDLHSNQVTNVT--PLVQLKNLKWIDLRFNQIT 372
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 139/285 (48%), Gaps = 65/285 (22%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
+DLS + +T+ L + +NL+ LD QI++ + L GL+NL L+ N IT
Sbjct: 144 LDLSRNQITNVN--PLSELTNLEWLDLGHN-QITN--ISPLSGLTNLEFLNLSHN-QIT- 196
Query: 122 QGMKAFAGLINL--VKLDLERCTRIH--GGLVNLK----------------GLMKLESLN 161
+ + LINL + L+ + T I+ L NL+ L LESL
Sbjct: 197 -NFRIISALINLKDIALNNNQITDIYPLAELTNLRRISLNNNQITTVRPLVQLTNLESLY 255
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 221
I N ITD ++PLS LTNL+ L ++ +++TD ++ L +LT NL G
Sbjct: 256 IG-NNQITD--IRPLSQLTNLRQLALNHNQITD-----IRPLSQLT--NLTG-------- 297
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
L L+ Q++D S++ +L+ ++L +N+IT+ + L L NL L
Sbjct: 298 -----------LALSHNQITD--VRPLSQLTNLEWIHLNYNQITN--ITPLVNLNNLTGL 342
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
+L S + + + L L NLK ++L Q+ + + LSGLTNL
Sbjct: 343 DLHSNQVTN--VTPLVQLKNLKWIDLRFNQI--TDISSLSGLTNL 383
>gi|410684076|ref|YP_006060083.1| leucine-rich-repeat type III effector protein (GALA1-like)
[Ralstonia solanacearum CMR15]
gi|299068565|emb|CBJ39793.1| leucine-rich-repeat type III effector protein (GALA1-like)
[Ralstonia solanacearum CMR15]
Length = 555
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 185/403 (45%), Gaps = 21/403 (5%)
Query: 25 LEAFRD----CALQDLCL-GQYPGVNDKWMDVIASQGSSLLSVDLS--GSDVTDSGLIHL 77
L+A RD AL+ L L G++ + +A+ +SL ++DLS G +T +G+ HL
Sbjct: 123 LQALRDTEGYAALESLTLEGRFTDED------LATLPASLKALDLSRCGRQITAAGIAHL 176
Query: 78 KDCSNLQSLDF--NFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
+ L L+ N+ I D G L LT+L+ +N I G +A A L
Sbjct: 177 SELP-LAELNVRNNW---IGDEGARLLAAHPTLTTLNVA-SNGIGDAGAQALAANTRLES 231
Query: 136 LDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDS 195
LD+ G+ L L++LNI N I D+ L+ T L L SC++++D+
Sbjct: 232 LDISFNEIGSDGVQALADNATLKTLNIS-SNDIGDAGALALAVNTTLTELNTSCNRISDA 290
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 255
G L LT L++ A + +++A L L+++R +LS+ G + +L
Sbjct: 291 GAQALANSDSLTSLDISDNGFGDAGVQAIAANTRLRRLDISRNRLSEAGVLAVAANTTLT 350
Query: 256 VLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSS 315
L + EI L T L SL+ GIG EG L LK L L +G +
Sbjct: 351 KLCIADCEIGTAGAQALAANTRLVSLDAGHNGIGTEGAQALARHATLKQLNLEKNPIGDA 410
Query: 316 GLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLT 375
G + L S+NL ++D LR LA ++L++LN+ +IT G A + + LT
Sbjct: 411 GAVAFADNATLRSLNLKGCKVTDSGLRVLATNATLRTLNVSDNRITAEGAKATAANSTLT 470
Query: 376 HLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS 418
LD+ I D GA L L L IC LT G+T L +
Sbjct: 471 SLDVSHNGIEDEGALALAANTVLNVLNICYNALTVKGVTALAA 513
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 173/371 (46%), Gaps = 18/371 (4%)
Query: 17 SRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSV-------DLSGSDV 69
SRC +++ L +L L + V + W I +G+ LL+ +++ + +
Sbjct: 162 SRCGRQITAAGI--AHLSELPLAEL-NVRNNW---IGDEGARLLAAHPTLTTLNVASNGI 215
Query: 70 TDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAG 129
D+G L + L+SLD +F +I G++ L + L +L+ N+ I G A A
Sbjct: 216 GDAGAQALAANTRLESLDISFN-EIGSDGVQALADNATLKTLNISSND-IGDAGALALAV 273
Query: 130 LINLVKLDLERCTRIH-GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
L +L+ C RI G L L SL+I N D+ ++ ++ T L+ L IS
Sbjct: 274 NTTLTELNTS-CNRISDAGAQALANSDSLTSLDIS-DNGFGDAGVQAIAANTRLRRLDIS 331
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
++++++G+ + LT L + C + A +L+A L L+ + +G +
Sbjct: 332 RNRLSEAGVLAVAANTTLTKLCIADCEIGTAGAQALAANTRLVSLDAGHNGIGTEGAQAL 391
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
++ +LK LNL N I D V L SLNL C + D GL L L+ L +S
Sbjct: 392 ARHATLKQLNLEKNPIGDAGAVAFADNATLRSLNLKGCKVTDSGLRVLATNATLRTLNVS 451
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
D ++ + G + + + L S+++S GI D LA + L LN+ +T G+ AL
Sbjct: 452 DNRITAEGAKATAANSTLTSLDVSHNGIEDEGALALAANTVLNVLNICYNALTVKGVTAL 511
Query: 369 TSLTGLTHLDL 379
+ T L LD+
Sbjct: 512 AASTTLAVLDI 522
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 169/368 (45%), Gaps = 7/368 (1%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC-IQISDGGLEHLRGLSNLTSLSFRR 115
++L S+ L G TD L L ++L++LD + C QI+ G+ HL L L L+ R
Sbjct: 133 AALESLTLEGR-FTDEDLATLP--ASLKALDLSRCGRQITAAGIAHLSELP-LAELNVR- 187
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
NN I +G + A L L++ G L +LESL+I + N I ++
Sbjct: 188 NNWIGDEGARLLAAHPTLTTLNVASNGIGDAGAQALAANTRLESLDISF-NEIGSDGVQA 246
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L+ LK+L IS + + D+G L LT LN ++ A +L+ SL L++
Sbjct: 247 LADNATLKTLNISSNDIGDAGALALAVNTTLTELNTSCNRISDAGAQALANSDSLTSLDI 306
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
+ D G + + L+ L++ N +++ ++ + T L L + C IG G
Sbjct: 307 SDNGFGDAGVQAIAANTRLRRLDISRNRLSEAGVLAVAANTTLTKLCIADCEIGTAGAQA 366
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L L L+ +G+ G + L+ L+ +NL I D A ++L+SLNL
Sbjct: 367 LAANTRLVSLDAGHNGIGTEGAQALARHATLKQLNLEKNPIGDAGAVAFADNATLRSLNL 426
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG 415
++TD+GL L + L L++ RIT GA L SL++ G+ D G
Sbjct: 427 KGCKVTDSGLRVLATNATLRTLNVSDNRITAEGAKATAANSTLTSLDVSHNGIEDEGALA 486
Query: 416 LVSLNVSN 423
L + V N
Sbjct: 487 LAANTVLN 494
>gi|218196286|gb|EEC78713.1| hypothetical protein OsI_18882 [Oryza sativa Indica Group]
Length = 601
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 201/443 (45%), Gaps = 74/443 (16%)
Query: 25 LEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNL 83
LE F+ +++++ L + V+ +W+ + + L + L+ +V S + L S L
Sbjct: 65 LEVFQH-SVEEIDLSGHIAVDAEWLAYLGA-FRYLRVLKLADCKNVNSSAVWALSGMSTL 122
Query: 84 QSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTR 143
+ LD + C +ISD G++H+ + +L L + +T G+ A + LINL LDL
Sbjct: 123 KELDLSRCSKISDAGIKHIASIESLEKLHVSQT-GLTDNGVMAISSLINLRLLDLGGVRF 181
Query: 144 IHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGL 203
L +L+ L +LE L+I W + IT+ L T+L L IS ++VT L L
Sbjct: 182 TDKALRSLQVLTQLEHLDI-WGSEITNEGASVLIAFTSLSFLNISWTRVT-----CLPIL 235
Query: 204 QKLTLLNLEGCPVTAAC-------------LDSLSALG------------SLFYLNLNRC 238
L LN+ C + + C + S ++ G SL YL+++ C
Sbjct: 236 LTLRCLNMSNCTIHSICNGEFQVLIHLEKLVISAASFGNIDEVFSSILPSSLTYLDMSSC 295
Query: 239 QLSD----------------------DGCEKFSKIG-SLKVLNLGFNEITDECLVHLKG- 274
S+ D E + IG +L L+L +E+T + L L G
Sbjct: 296 SSSNLYFLGNMRNLEHLDLSYSRIISDAIEYIANIGMNLMFLSLSNSEVTSQALCVLAGT 355
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT---------QVGSSGLRHLSGLTN 325
+ +L +L+L I D L+ ++ + +L+ L LS T V L L L
Sbjct: 356 VPSLTTLSLAHTKIDDSALLYISMMPSLRILNLSRTCIKGFMMENSVKVLSLSALEELKY 415
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
LES+NL+ T + D + LA +LK L L + ++D L AL+S + L HL G ++
Sbjct: 416 LESLNLNNTQLMDDVIPPLASFRALKYLFLKSDFLSDPALHALSSASNLIHLGFCGNILS 475
Query: 386 DSGAAYLRNF---KNLRSLEICG 405
+G LR F LR L++ G
Sbjct: 476 TTG---LRKFVPPATLRMLDLSG 495
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 172/377 (45%), Gaps = 44/377 (11%)
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLV-NLKGLMKLESLNIKWCNCITDSDMKPL 176
A+ A+ + L L L C ++ V L G+ L+ L++ C+ I+D+ +K +
Sbjct: 82 AVDAEWLAYLGAFRYLRVLKLADCKNVNSSAVWALSGMSTLKELDLSRCSKISDAGIKHI 141
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+ + +L+ L +S + +TD+G+ + L L LL+L G T L SL L L +L++
Sbjct: 142 ASIESLEKLHVSQTGLTDNGVMAISSLINLRLLDLGGVRFTDKALRSLQVLTQLEHLDIW 201
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEIT-------------DECLVH------LKGLTN 277
+++++G SL LN+ + +T C +H + L +
Sbjct: 202 GSEITNEGASVLIAFTSLSFLNISWTRVTCLPILLTLRCLNMSNCTIHSICNGEFQVLIH 261
Query: 278 LESLNLDSCGIG--DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 335
LE L + + G DE ++ +L L++S SS L L + NLE ++LS++
Sbjct: 262 LEKLVISAASFGNIDEVFSSILP-SSLTYLDMSS--CSSSNLYFLGNMRNLEHLDLSYSR 318
Query: 336 ISDGSLRKLAGLS-SLKSLNLDARQITDTGLAALT-SLTGLTHLDLFGARITDSGAAYLR 393
I ++ +A + +L L+L ++T L L ++ LT L L +I DS Y+
Sbjct: 319 IISDAIEYIANIGMNLMFLSLSNSEVTSQALCVLAGTVPSLTTLSLAHTKIDDSALLYIS 378
Query: 394 NFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAN 453
+LR L L+ + G + N + L L+ LK L SL L + ++ +
Sbjct: 379 MMPSLRIL-----NLSRTCIKGFMMEN----SVKVLSLSALEELKYLESLNLNNTQLM-D 428
Query: 454 DIKRLQSRDLPNLVSFR 470
D+ +P L SFR
Sbjct: 429 DV-------IPPLASFR 438
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 111/213 (52%), Gaps = 5/213 (2%)
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGL 317
G + E L +L L L L C + + L+G+ LK L+LS +++ +G+
Sbjct: 79 GHIAVDAEWLAYLGAFRYLRVLKLADCKNVNSSAVWALSGMSTLKELDLSRCSKISDAGI 138
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
+H++ + +LE +++S TG++D + ++ L +L+ L+L + TD L +L LT L HL
Sbjct: 139 KHIASIESLEKLHVSQTGLTDNGVMAISSLINLRLLDLGGVRFTDKALRSLQVLTQLEHL 198
Query: 378 DLFGARITDSGAAYLRNFKNLRSLEICGGGLT-DAGLTGLVSLNVSNSRITSAGLRHLKP 436
D++G+ IT+ GA+ L F +L L I +T L L LN+SN I S +
Sbjct: 199 DIWGSEITNEGASVLIAFTSLSFLNISWTRVTCLPILLTLRCLNMSNCTIHSICNGEFQV 258
Query: 437 LKNLRSLTLESCKVTANDIKRLQSRDLPNLVSF 469
L +L L + + +I + S LP+ +++
Sbjct: 259 LIHLEKLVISAASF--GNIDEVFSSILPSSLTY 289
>gi|83592173|ref|YP_425925.1| hypothetical protein Rru_A0837 [Rhodospirillum rubrum ATCC 11170]
gi|386348881|ref|YP_006047129.1| hypothetical protein F11_04310 [Rhodospirillum rubrum F11]
gi|83575087|gb|ABC21638.1| Leucine-rich repeat [Rhodospirillum rubrum ATCC 11170]
gi|346717317|gb|AEO47332.1| leucine-rich repeat-containing protein [Rhodospirillum rubrum F11]
Length = 1085
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 157/286 (54%), Gaps = 24/286 (8%)
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
L L G+ L+SL + +D+ PL+GL NL+S+ +S +++TD +A L GL+ L
Sbjct: 109 LTPLTGIKSLQSLILSETQV---TDLTPLAGLKNLQSINLSATQITD--LAPLAGLENLQ 163
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
L L VT L L+ L +L +L L ++ D + + SL+ L+L +T+
Sbjct: 164 NLTLSYTTVTD--LAPLAGLENLQHLILLGTRVID--LTPLAGLKSLQSLDLSGTRVTN- 218
Query: 268 CLVHLKGLTNLESLNLDSCGIGD-EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
+ L GL +L+SL+L + D LV L L +L+ L LS T V + L L+GL NL
Sbjct: 219 -IAPLVGLKSLQSLDLRRTRVTDIAPLVGLKSLKSLQSLNLSRTPV--TDLAPLAGLENL 275
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
+++ LS+T ++D L LAGL +L++++L ++ D LA L L L ++DL G + D
Sbjct: 276 QNLTLSYTTVTD--LAPLAGLENLQNIDLGGTEVID--LAPLAGLENLQNIDLGGTEVID 331
Query: 387 SGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITS 428
A L +NL++L + +TD AGL L S++ S RITS
Sbjct: 332 --LAPLAGLENLQNLTLSYTTVTDLAPLAGLENLQSIDCSGCRITS 375
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 158/305 (51%), Gaps = 37/305 (12%)
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
+D+ PL+GL NL+ L +S + VTD + L G++ L L L VT L L+ L +L
Sbjct: 85 TDLTPLTGLENLQGLFLSYTAVTD--LTPLTGIKSLQSLILSETQVTD--LTPLAGLKNL 140
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
+NL+ Q++D + + +L+ L L + +TD L L GL NL+ L L + D
Sbjct: 141 QSINLSATQITD--LAPLAGLENLQNLTLSYTTVTD--LAPLAGLENLQHLILLGTRVID 196
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD-GSLRKLAGLSS 349
L L GL +L+ L+LS T+V + + L GL +L+S++L T ++D L L L S
Sbjct: 197 --LTPLAGLKSLQSLDLSGTRV--TNIAPLVGLKSLQSLDLRRTRVTDIAPLVGLKSLKS 252
Query: 350 LKSLNLDARQITD--------------------TGLAALTSLTGLTHLDLFGARITDSGA 389
L+SLNL +TD T LA L L L ++DL G + D
Sbjct: 253 LQSLNLSRTPVTDLAPLAGLENLQNLTLSYTTVTDLAPLAGLENLQNIDLGGTEVID--L 310
Query: 390 AYLRNFKNLRSLEICGGGLTD-AGLTGLVSL-NVSNSRITSAGLRHLKPLKNLRSLTLES 447
A L +NL+++++ G + D A L GL +L N++ S T L L L+NL+S+
Sbjct: 311 APLAGLENLQNIDLGGTEVIDLAPLAGLENLQNLTLSYTTVTDLAPLAGLENLQSIDCSG 370
Query: 448 CKVTA 452
C++T+
Sbjct: 371 CRITS 375
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 114/225 (50%), Gaps = 28/225 (12%)
Query: 58 SLLSVDLSGSDVTD-SGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
SL S+DL + VTD + L+ LK +LQSL+ + ++D L L GL NL +L+
Sbjct: 227 SLQSLDLRRTRVTDIAPLVGLKSLKSLQSLNLSRT-PVTD--LAPLAGLENLQNLTL--- 280
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+ T + AGL NL +DL I L L GL L+++++ I D+ PL
Sbjct: 281 SYTTVTDLAPLAGLENLQNIDLGGTEVID--LAPLAGLENLQNIDLGGTEVI---DLAPL 335
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+GL NL++L +S + VTD +A L GL+ L ++ GC +T+ D L +L ++ +
Sbjct: 336 AGLENLQNLTLSYTTVTD--LAPLAGLENLQSIDCSGCRITSVP-DGLFDSPALRWVICS 392
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG-LTNLES 280
L+D E S+ G+ D CL H++ L +LE
Sbjct: 393 EGALADIPAEALSQGGA------------DNCLPHIRAHLRDLEQ 425
>gi|290993787|ref|XP_002679514.1| predicted protein [Naegleria gruberi]
gi|284093131|gb|EFC46770.1| predicted protein [Naegleria gruberi]
Length = 282
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 135/300 (45%), Gaps = 57/300 (19%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+T LKSL + + + D G+ ++ L+ L +LG L RC
Sbjct: 1 ITTLKSLNLHHNNIEDEGVEFISDLK-------------------LESLG------LCRC 35
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI---------- 288
L+ KI SLK L+L N I DEC +L LT+LE L+L I
Sbjct: 36 ALTSKSTSFLCKITSLKKLDLSENIINDECGFYLSMLTDLEELDLHDNSIEGKCFKEFSS 95
Query: 289 ---------------GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
+E ++ L+ +LK L LS +G S + HLS LTNL+ + L+
Sbjct: 96 LKKLKTLKLCQNRISQEEAMIYLSQTVSLKSLNLSQNNIGQSSI-HLSNLTNLKELELNL 154
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
I+ G L + L L+ L + + L+ L L L +FG + + ++
Sbjct: 155 CKITKGGLSFFSNLKKLEILKISQNSLGYDDFEELSHLVRLRILSIFGCGLEKNSTNFIG 214
Query: 394 NFKNLRSLEICGGGLTDAG---LTGLVSLNV---SNSRITSAGLRHLKPLKNLRSLTLES 447
N K LR+LE+ + DAG L+GLV+L + ++RIT G++HL +K L L L S
Sbjct: 215 NIKTLRNLEMFSNNIYDAGLASLSGLVNLQILKLDSTRITDTGIQHLSQMKELEILRLNS 274
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 125/261 (47%), Gaps = 5/261 (1%)
Query: 155 MKLESLNIKWCNC-ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
+KLESL + C C +T L +T+LK L +S + + D YL L L L+L
Sbjct: 25 LKLESLGL--CRCALTSKSTSFLCKITSLKKLDLSENIINDECGFYLSMLTDLEELDLHD 82
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF-SKIGSLKVLNLGFNEITDECLVHL 272
+ C S+L L L L + ++S + + S+ SLK LNL N I +HL
Sbjct: 83 NSIEGKCFKEFSSLKKLKTLKLCQNRISQEEAMIYLSQTVSLKSLNLSQNNIGQSS-IHL 141
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
LTNL+ L L+ C I GL + L L+ L++S +G LS L L +++
Sbjct: 142 SNLTNLKELELNLCKITKGGLSFFSNLKKLEILKISQNSLGYDDFEELSHLVRLRILSIF 201
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
G+ S + + +L++L + + I D GLA+L+ L L L L RITD+G +L
Sbjct: 202 GCGLEKNSTNFIGNIKTLRNLEMFSNNIYDAGLASLSGLVNLQILKLDSTRITDTGIQHL 261
Query: 393 RNFKNLRSLEICGGGLTDAGL 413
K L L + L + L
Sbjct: 262 SQMKELEILRLNSNSLGNETL 282
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 2/171 (1%)
Query: 147 GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKL 206
++ L + L+SLN+ N I S + LS LTNLK L+++ K+T G+++ L+KL
Sbjct: 114 AMIYLSQTVSLKSLNLSQNN-IGQSSI-HLSNLTNLKELELNLCKITKGGLSFFSNLKKL 171
Query: 207 TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
+L + + + LS L L L++ C L + I +L+ L + N I D
Sbjct: 172 EILKISQNSLGYDDFEELSHLVRLRILSIFGCGLEKNSTNFIGNIKTLRNLEMFSNNIYD 231
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGL 317
L L GL NL+ L LDS I D G+ +L+ + L+ L L+ +G+ L
Sbjct: 232 AGLASLSGLVNLQILKLDSTRITDTGIQHLSQMKELEILRLNSNSLGNETL 282
>gi|320164611|gb|EFW41510.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 853
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 172/425 (40%), Gaps = 59/425 (13%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
QI+ GL+ LT LS N IT+ + AFAGL L +LDL
Sbjct: 69 QITGIAPSAFTGLTALTVLSLSYNQ-ITSIPVSAFAGLDALTRLDLSSNLITSISASAFP 127
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS------------------------ 188
L L LN++ N IT +GLT L+ L +S
Sbjct: 128 SLTALTELNLQG-NLITSIPASLFTGLTALRWLPLSNNQITSIAANAFNGLSAVTLIYLQ 186
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
+++TD A GL LT L L G +T+ + + L SL L+L ++++ F
Sbjct: 187 TNQITDLSPATFTGLAALTELYLMGNQITSIHASTFAGLTSLENLDLQDNKITEVPASAF 246
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
+ + +L L L N+IT+ GLT LE LNL I + L L+ L L
Sbjct: 247 TDLSALTGLTLQDNQITEIPASAFAGLTVLEILNLQGNQITNIPETVFADLTALETLNLQ 306
Query: 309 DTQVGSSGLRHLSGLTNLESINLS-----------FTG-------------ISDGSLRKL 344
D Q+ S + LT L S++L FTG I+D S
Sbjct: 307 DNQITSIPASAFADLTALRSLDLQDNNITSIPASVFTGLSALNELKLHTNKITDLSASVF 366
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
A L++L L L + QIT+ A T LT LT LDL +IT + LR L +
Sbjct: 367 ASLTALAVLELQSNQITEISANAFTGLTALTKLDLSSCQITSFSVDAFTSLTALRDLYLH 426
Query: 405 GGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT---ANDI 455
+T GLT L L ++ ++ITS L L +LTL +T AN
Sbjct: 427 FNQITSIPASAFTGLTALYVLILAYNQITSLPTNTFTGLTALNTLTLSFNPITSISANTF 486
Query: 456 KRLQS 460
L S
Sbjct: 487 TDLTS 491
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 158/362 (43%), Gaps = 24/362 (6%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVN 150
QI+ GLS +T L + + N IT F GL L +L L + T IH
Sbjct: 165 QITSIAANAFNGLSAVT-LIYLQTNQITDLSPATFTGLAALTELYLMGNQITSIHAS--T 221
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
GL LE+L+++ N IT+ + L+ L L + +++T+ + GL L +LN
Sbjct: 222 FAGLTSLENLDLQD-NKITEVPASAFTDLSALTGLTLQDNQITEIPASAFAGLTVLEILN 280
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
L+G +T + L +L LNL Q++ F+ + +L+ L+L N IT
Sbjct: 281 LQGNQITNIPETVFADLTALETLNLQDNQITSIPASAFADLTALRSLDLQDNNITSIPAS 340
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
GL+ L L L + I D L L LEL Q+ +GLT L ++
Sbjct: 341 VFTGLSALNELKLHTNKITDLSASVFASLTALAVLELQSNQITEISANAFTGLTALTKLD 400
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
LS I+ S+ L++L+ L L QIT +A T LT L L L +IT
Sbjct: 401 LSSCQITSFSVDAFTSLTALRDLYLHFNQITSIPASAFTGLTALYVLILAYNQIT----- 455
Query: 391 YLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
SL T GLT L +L +S + ITS L +L L L + ++
Sbjct: 456 ---------SLPTN----TFTGLTALNTLTLSFNPITSISANTFTDLTSLFFLILNNNQI 502
Query: 451 TA 452
T+
Sbjct: 503 TS 504
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 142/319 (44%), Gaps = 12/319 (3%)
Query: 139 ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIA 198
E T I G+ +++L S N IT +GLT L L +S +++T ++
Sbjct: 47 ETLTTIPTGIPVDTTMLRLSS------NQITGIAPSAFTGLTALTVLSLSYNQITSIPVS 100
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN 258
GL LT L+L +T+ + +L +L LNL ++ F+ + +L+ L
Sbjct: 101 AFAGLDALTRLDLSSNLITSISASAFPSLTALTELNLQGNLITSIPASLFTGLTALRWLP 160
Query: 259 LGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
L N+IT GL+ + + L + I D TGL L L L Q+ S
Sbjct: 161 LSNNQITSIAANAFNGLSAVTLIYLQTNQITDLSPATFTGLAALTELYLMGNQITSIHAS 220
Query: 319 HLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 378
+GLT+LE+++L I++ LS+L L L QIT+ +A LT L L+
Sbjct: 221 TFAGLTSLENLDLQDNKITEVPASAFTDLSALTGLTLQDNQITEIPASAFAGLTVLEILN 280
Query: 379 LFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLR 432
L G +IT+ + L +L + +T A LT L SL++ ++ ITS
Sbjct: 281 LQGNQITNIPETVFADLTALETLNLQDNQITSIPASAFADLTALRSLDLQDNNITSIPAS 340
Query: 433 HLKPLKNLRSLTLESCKVT 451
L L L L + K+T
Sbjct: 341 VFTGLSALNELKLHTNKIT 359
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 142/341 (41%), Gaps = 26/341 (7%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVN 150
QI+D GL+ LT L + N IT+ FAGL +L LDL+ + T +
Sbjct: 189 QITDLSPATFTGLAALTEL-YLMGNQITSIHASTFAGLTSLENLDLQDNKITEVPASAFT 247
Query: 151 ----------------------LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
GL LE LN++ N IT+ + LT L++L +
Sbjct: 248 DLSALTGLTLQDNQITEIPASAFAGLTVLEILNLQG-NQITNIPETVFADLTALETLNLQ 306
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
+++T + L L L+L+ +T+ + L +L L L+ +++D F
Sbjct: 307 DNQITSIPASAFADLTALRSLDLQDNNITSIPASVFTGLSALNELKLHTNKITDLSASVF 366
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
+ + +L VL L N+IT+ GLT L L+L SC I + T L L+ L L
Sbjct: 367 ASLTALAVLELQSNQITEISANAFTGLTALTKLDLSSCQITSFSVDAFTSLTALRDLYLH 426
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
Q+ S +GLT L + L++ I+ GL++L +L L IT
Sbjct: 427 FNQITSIPASAFTGLTALYVLILAYNQITSLPTNTFTGLTALNTLTLSFNPITSISANTF 486
Query: 369 TSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLT 409
T LT L L L +IT A L+ L + T
Sbjct: 487 TDLTSLFFLILNNNQITSISANAFAGLPGLKYLVLSDNPFT 527
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 153/354 (43%), Gaps = 13/354 (3%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQ---ISDGGLEHLRGLSNLTSLSF 113
++L + L G+ +T IH + L SL+ N +Q I++ LS LT L+
Sbjct: 202 AALTELYLMGNQITS---IHASTFAGLTSLE-NLDLQDNKITEVPASAFTDLSALTGLTL 257
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDS 171
+ +N IT AFAGL L L+L+ + T I + L LE+LN++ N IT
Sbjct: 258 Q-DNQITEIPASAFAGLTVLEILNLQGNQITNIPETV--FADLTALETLNLQD-NQITSI 313
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
+ LT L+SL + + +T + GL L L L +T ++L +L
Sbjct: 314 PASAFADLTALRSLDLQDNNITSIPASVFTGLSALNELKLHTNKITDLSASVFASLTALA 373
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
L L Q+++ F+ + +L L+L +IT + LT L L L I
Sbjct: 374 VLELQSNQITEISANAFTGLTALTKLDLSSCQITSFSVDAFTSLTALRDLYLHFNQITSI 433
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
TGL L L L+ Q+ S +GLT L ++ LSF I+ S L+SL
Sbjct: 434 PASAFTGLTALYVLILAYNQITSLPTNTFTGLTALNTLTLSFNPITSISANTFTDLTSLF 493
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
L L+ QIT A L GL +L L T + N SL + G
Sbjct: 494 FLILNNNQITSISANAFAGLPGLKYLVLSDNPFTTLPPGLFQGLPNGLSLSLSG 547
>gi|300691655|ref|YP_003752650.1| type III effector protein [Ralstonia solanacearum PSI07]
gi|299078715|emb|CBJ51374.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
solanacearum PSI07]
Length = 608
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 147/470 (31%), Positives = 204/470 (43%), Gaps = 31/470 (6%)
Query: 3 PRDISQQIFNELV-YSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWM------DVIASQ 55
PR + + EL SR + V+ RD A+ LG YP + + D + +
Sbjct: 103 PRRAMRAVSRELRDASRAV--VTHLTIRDPAVLR-HLGNYPALKSLRLKGALTLDALKAL 159
Query: 56 GSSLLSVDLS---GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLS 112
L +DLS GS ++ +GL HL L+SL I+I G + L ++L SLS
Sbjct: 160 PPGLEHLDLSRCTGSAMSSAGLAHLA-ARPLKSLCM-IGIEIGVEGAQRLAASTSLASLS 217
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDS 171
I + +A A ++ LDL RI G L G L SLN+ + N I D
Sbjct: 218 LI-GCEIGDRAAEALAASQSIKSLDLS-ANRIGRDGARALAG-APLVSLNL-YSNAIGDE 273
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
+ L+ L SL +S + + D+G L LT LNL+G + +L+ SL
Sbjct: 274 GARALATSRTLTSLNLSSNGIDDAGAGALADNTLLTQLNLQGNRIGRGGAQALANSTSLT 333
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
L+L +L D G + SL L++ NEI D+ L L+SLNL I
Sbjct: 334 DLDLGNNRLGDRGARALAGSKSLTSLSVRGNEIGDKGAKALARNATLKSLNLSYNLISLR 393
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
G+ L G L L+L + SSG L+ +L S+ L I D R LA S+L
Sbjct: 394 GVRALGGSATLSVLDLCACDIDSSGASALARNASLASLYLGSNRIGDRGARALAKNSTLT 453
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
L L I TG AL L LDL G I D GAA L L SL++ G + A
Sbjct: 454 RLALSGNGIHTTGAQALAGNDSLISLDLGGNEIDDDGAAALARHPRLISLDLRGNRIRSA 513
Query: 412 GL------TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 455
G L L++S +RI + G L RS L + V+ N I
Sbjct: 514 GAQQLAKSATLAELDLSANRIGAEGAEALS-----RSTVLTTLNVSDNAI 558
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 167/384 (43%), Gaps = 9/384 (2%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
+ D+ + +A+ S+ S+DLS + + G L L SL+ + I D G L
Sbjct: 223 IGDRAAEALAAS-QSIKSLDLSANRIGRDGARALAGAP-LVSLNL-YSNAIGDEGARALA 279
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
LTSL+ +N I G A A L +L+L+ GG L L L++
Sbjct: 280 TSRTLTSLNLS-SNGIDDAGAGALADNTLLTQLNLQGNRIGRGGAQALANSTSLTDLDL- 337
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
N + D + L+G +L SL + +++ D G L L LNL ++ + +
Sbjct: 338 GNNRLGDRGARALAGSKSLTSLSVRGNEIGDKGAKALARNATLKSLNLSYNLISLRGVRA 397
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
L +L L+L C + G ++ SL L LG N I D L + L L L
Sbjct: 398 LGGSATLSVLDLCACDIDSSGASALARNASLASLYLGSNRIGDRGARALAKNSTLTRLAL 457
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
GI G L G +L L+L ++ G L+ L S++L I ++
Sbjct: 458 SGNGIHTTGAQALAGNDSLISLDLGGNEIDDDGAAALARHPRLISLDLRGNRIRSAGAQQ 517
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
LA ++L L+L A +I G AL+ T LT L++ I D+GA L +L SL+
Sbjct: 518 LAKSATLAELDLSANRIGAEGAEALSRSTVLTTLNVSDNAIGDAGALALAKSTSLISLDA 577
Query: 404 CGGGLTDAGLTGLVSLNVSNSRIT 427
G+ + G L +N+R+T
Sbjct: 578 RRSGIGEVGARAL----EANTRLT 597
>gi|428317664|ref|YP_007115546.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
gi|428241344|gb|AFZ07130.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
Length = 782
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 118/335 (35%), Positives = 167/335 (49%), Gaps = 40/335 (11%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++L + +TD + L +NL L+ N QI+D + L GL+NLT LS N
Sbjct: 97 TNLTYLNLESNQITD--ITPLSALTNLTYLNLNHN-QITD--ITPLSGLTNLTILSLEYN 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHG--GLVNLKGLMKLESLNIKWCNCITDSDMK 174
G+ A L +L L + T I G GL NL + SLN N ITD +
Sbjct: 152 QITDITGLSALTNLTDLC-LGCNQITDITGLLGLTNLTRV----SLN---NNEITD--VT 201
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
PLS LTNL L I ++TD I+ L L LT L++ + + L +L+ L LF
Sbjct: 202 PLSALTNLTKLGIENQEITD--ISPLSALTNLTELSISDGIIDISPLSALTNLTELFI-- 257
Query: 235 LNRCQLSDDGCEKFSKIGS---LKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
+G S + + L L++ +N+ E + L LTNL SL I D
Sbjct: 258 -------SEGITDISPLSALTNLTKLSIIYNDTITE-ISPLSALTNLTSLYFLYTQITD- 308
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
+ L+ L NL L LSD Q+ + + LS LTNL +NLS I+D + L+ L++L
Sbjct: 309 -ITALSALTNLTYLYLSDNQI--TDITALSALTNLTYLNLSNNQITD--IAALSALTNLT 363
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
LNL QITD + AL++LT LT L L +ITD
Sbjct: 364 YLNLSNNQITD--ITALSALTNLTELHLETNQITD 396
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 163/352 (46%), Gaps = 63/352 (17%)
Query: 145 HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQ 204
H + N L L +L + +D+ LS LTNL L + +++TD I L L
Sbjct: 62 HRSITNFTSLSALTNLTALYLQGSQINDIASLSALTNLTYLNLESNQITD--ITPLSALT 119
Query: 205 KLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD--------------GCEKFSK 250
LT LNL +T + LS L +L L+L Q++D GC + +
Sbjct: 120 NLTYLNLNHNQITD--ITPLSGLTNLTILSLEYNQITDITGLSALTNLTDLCLGCNQITD 177
Query: 251 I------GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
I +L ++L NEITD + L LTNL L +++ I D + L+ L NL
Sbjct: 178 ITGLLGLTNLTRVSLNNNEITD--VTPLSALTNLTKLGIENQEITD--ISPLSALTNLTE 233
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS---------------------LRK 343
L +SD G + LS LTNL + +S GI+D S +
Sbjct: 234 LSISD---GIIDISPLSALTNLTELFIS-EGITDISPLSALTNLTKLSIIYNDTITEISP 289
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
L+ L++L SL QITD + AL++LT LT+L L +ITD A L NL L +
Sbjct: 290 LSALTNLTSLYFLYTQITD--ITALSALTNLTYLYLSDNQITDITA--LSALTNLTYLNL 345
Query: 404 CGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
+TD + LT L LN+SN++IT + L L NL L LE+ ++T
Sbjct: 346 SNNQITDIAALSALTNLTYLNLSNNQIT--DITALSALTNLTELHLETNQIT 395
>gi|374586212|ref|ZP_09659304.1| hypothetical protein Lepil_2392 [Leptonema illini DSM 21528]
gi|373875073|gb|EHQ07067.1| hypothetical protein Lepil_2392 [Leptonema illini DSM 21528]
Length = 346
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 148/312 (47%), Gaps = 9/312 (2%)
Query: 79 DCSNLQSLD-FNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLD 137
D + +++++ + + Q+ + +R + + +L T M + L KL
Sbjct: 26 DWAKVRAIEQYVYTGQLKGVTMAEIRAVKDWYAL------GATDAEMPRLLSMQRLEKLS 79
Query: 138 LERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGI 197
L LV+L G L+ LN+ ITD+ +K + + L+ L ++ +K+TD+G+
Sbjct: 80 LGGQNYTDAALVHLAGFKHLKELNLS-TGPITDAGLKSIGQIKTLEKLDLAETKITDAGV 138
Query: 198 AYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
A L GL +L L+L VT AC+ S+ + SL L LN ++D G E+ + L+ L
Sbjct: 139 ADLVGLSRLKDLSLIDTAVTDACMTSIMQMKSLEILQLNMTGITDRGVEQLIQHQRLRKL 198
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGL 317
LG +TDE + ++ + NL+ I +GLV L NL+ L L+DT V L
Sbjct: 199 ILGGTAVTDESVGYVAQIANLDEAVFSRTKIRGKGLVRLRQAKNLRRLWLADTSVDDDDL 258
Query: 318 RH-LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
L L+ ++L I+ ++ +A + +K L + +I + L L T L
Sbjct: 259 IELLQPPMELDMLHLGHLKITGKTMEAIARCNCVKDLYVGYTKIGNDDLLKLIPATRLKS 318
Query: 377 LDLFGARITDSG 388
+ + R+TD G
Sbjct: 319 ITVTKTRVTDDG 330
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 18/218 (8%)
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
+D + + L+ L+LG TD LVHL G +L+ LNL + I D GL ++ +
Sbjct: 62 TDAEMPRLLSMQRLEKLSLGGQNYTDAALVHLAGFKHLKELNLSTGPITDAGLKSIGQIK 121
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
L+ L+L++T++ +G+ L GL+ L+ ++L T ++D + + + SL+ L L+ I
Sbjct: 122 TLEKLDLAETKITDAGVADLVGLSRLKDLSLIDTAVTDACMTSIMQMKSLEILQLNMTGI 181
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLN 420
TD G+ L L L L G +TD Y+ NL D +
Sbjct: 182 TDRGVEQLIQHQRLRKLILGGTAVTDESVGYVAQIANL-----------DEAV------- 223
Query: 421 VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
S ++I GL L+ KNLR L L V +D+ L
Sbjct: 224 FSRTKIRGKGLVRLRQAKNLRRLWLADTSVDDDDLIEL 261
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 133/305 (43%), Gaps = 21/305 (6%)
Query: 150 NLKGLMKLESLNIK-WCNC-ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
LKG+ E +K W TD++M L + L+ L + TD+ + +L G + L
Sbjct: 41 QLKGVTMAEIRAVKDWYALGATDAEMPRLLSMQRLEKLSLGGQNYTDAALVHLAGFKHLK 100
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
LNL P+T A L S+ + +L L+L +++D G + LK L+L +TD
Sbjct: 101 ELNLSTGPITDAGLKSIGQIKTLEKLDLAETKITDAGVADLVGLSRLKDLSLIDTAVTDA 160
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
C+ + + +LE L L+ GI D G+ L L+ L L T V + +++ + NL+
Sbjct: 161 CMTSIMQMKSLEILQLNMTGITDRGVEQLIQHQRLRKLILGGTAVTDESVGYVAQIANLD 220
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDS 387
S T I L +L +L+ L L + D L L L LD+
Sbjct: 221 EAVFSRTKIRGKGLVRLRQAKNLRRLWLADTSVDDDDLIEL--LQPPMELDML------- 271
Query: 388 GAAYLRNFKNLRSLEICGGGLTDAGLTGLVS-LNVSNSRITSAGLRHLKPLKNLRSLTLE 446
+L L+I G + V L V ++I + L L P L+S+T+
Sbjct: 272 ---------HLGHLKITGKTMEAIARCNCVKDLYVGYTKIGNDDLLKLIPATRLKSITVT 322
Query: 447 SCKVT 451
+VT
Sbjct: 323 KTRVT 327
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 157/340 (46%), Gaps = 39/340 (11%)
Query: 3 PRDISQ-QIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYP-GVNDKWMDVIASQGSSLL 60
P D ++ + + VY+ L V++ R A++D Y G D M + S L
Sbjct: 24 PADWAKVRAIEQYVYTGQLKGVTMAEIR--AVKDW----YALGATDAEMPRLLSM-QRLE 76
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
+ L G + TD+ L+HL G +HL+ L NL++ IT
Sbjct: 77 KLSLGGQNYTDAALVHL-------------------AGFKHLKEL-NLST------GPIT 110
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
G+K+ + L KLDL G+ +L GL +L+ L++ +TD+ M + +
Sbjct: 111 DAGLKSIGQIKTLEKLDLAETKITDAGVADLVGLSRLKDLSL-IDTAVTDACMTSIMQMK 169
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
+L+ LQ++ + +TD G+ L Q+L L L G VT + ++ + +L +R ++
Sbjct: 170 SLEILQLNMTGITDRGVEQLIQHQRLRKLILGGTAVTDESVGYVAQIANLDEAVFSRTKI 229
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVH-LKGLTNLESLNLDSCGIGDEGLVNLTGL 299
G + + +L+ L L + D+ L+ L+ L+ L+L I + + +
Sbjct: 230 RGKGLVRLRQAKNLRRLWLADTSVDDDDLIELLQPPMELDMLHLGHLKITGKTMEAI-AR 288
Query: 300 CN-LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
CN +K L + T++G+ L L T L+SI ++ T ++D
Sbjct: 289 CNCVKDLYVGYTKIGNDDLLKLIPATRLKSITVTKTRVTD 328
>gi|344174745|emb|CCA86555.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
syzygii R24]
Length = 468
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 168/370 (45%), Gaps = 10/370 (2%)
Query: 81 SNLQSLDFNFCI-QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE 139
++L+ LD + C I+ G+ HL L L L+ R + I A+G + A L LD+
Sbjct: 74 ASLKELDLSRCRGPITAAGIAHLSRLP-LVRLNVR-DKRIGAEGARRLANHPTLTSLDVS 131
Query: 140 RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY 199
G L KL +L++ N I K L+ L SL IS + + + G
Sbjct: 132 NGRIGPEGARALADNTKLTTLSVSH-NRIGAEGAKALAASKTLTSLDISENGIGNEGACA 190
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
L KLT LN+ + +L+A +L L++ + D+G + L LN+
Sbjct: 191 LATNAKLTTLNVNRNQIGVEGAKALAAGEALTSLDIGGNDIGDEGVRALAANARLTTLNV 250
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
+ + + L L SL +DS IGD G L +L L + + +G +
Sbjct: 251 ERTRVGADGVGALAASKTLTSLRIDSNTIGDAGARALATNTSLTTLHIESNGISPAGAQA 310
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
L+ T L ++NL + GI D + + ++L SL++ ++D G L + LT LD
Sbjct: 311 LAANTTLTTLNLGYNGIGDAGAQAWSANTTLISLSVRRSGLSDAGATTLAASKTLTTLDA 370
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL------TGLVSLNVSNSRITSAGLRH 433
I D+GA L + L +L++ + +AG T L SL++ N+R+T AG+R
Sbjct: 371 GDNTIRDAGARALAANRTLTTLDVRSNEIENAGARALAANTRLASLDLRNNRVTKAGVRA 430
Query: 434 LKPLKNLRSL 443
L + L SL
Sbjct: 431 LLANRTLSSL 440
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 154/341 (45%), Gaps = 19/341 (5%)
Query: 133 LVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNC----ITDSDMKPLSGLTNLKSLQIS 188
L +LDL RC G + G+ L L + N I + L+ L SL +S
Sbjct: 76 LKELDLSRCR----GPITAAGIAHLSRLPLVRLNVRDKRIGAEGARRLANHPTLTSLDVS 131
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
++ G L KLT L++ + A +L+A +L L+++ + ++G
Sbjct: 132 NGRIGPEGARALADNTKLTTLSVSHNRIGAEGAKALAASKTLTSLDISENGIGNEGACAL 191
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
+ L LN+ N+I E L L SL++ IGDEG+ L L L +
Sbjct: 192 ATNAKLTTLNVNRNQIGVEGAKALAAGEALTSLDIGGNDIGDEGVRALAANARLTTLNVE 251
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
T+VG+ G+ L+ L S+ + I D R LA +SL +L++++ I+ G AL
Sbjct: 252 RTRVGADGVGALAASKTLTSLRIDSNTIGDAGARALATNTSLTTLHIESNGISPAGAQAL 311
Query: 369 TSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS------LNVS 422
+ T LT L+L I D+GA L SL + GL+DAG T L + L+
Sbjct: 312 AANTTLTTLNLGYNGIGDAGAQAWSANTTLISLSVRRSGLSDAGATTLAASKTLTTLDAG 371
Query: 423 NSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDL 463
++ I AG R L + TL + V +N+I+ +R L
Sbjct: 372 DNTIRDAGARALAANR-----TLTTLDVRSNEIENAGARAL 407
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 3/230 (1%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
+ G +L S+D+ G+D+ D G+ L + L +L+ ++ G+ L LTSL
Sbjct: 216 AAGEALTSLDIGGNDIGDEGVRALAANARLTTLNVERT-RVGADGVGALAASKTLTSLRI 274
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
+N I G +A A +L L +E G L L +LN+ + N I D+
Sbjct: 275 -DSNTIGDAGARALATNTSLTTLHIESNGISPAGAQALAANTTLTTLNLGY-NGIGDAGA 332
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
+ S T L SL + S ++D+G L + LT L+ + A +L+A +L L
Sbjct: 333 QAWSANTTLISLSVRRSGLSDAGATTLAASKTLTTLDAGDNTIRDAGARALAANRTLTTL 392
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
++ ++ + G + L L+L N +T + L L SL +
Sbjct: 393 DVRSNEIENAGARALAANTRLASLDLRNNRVTKAGVRALLANRTLSSLGV 442
>gi|215769345|dbj|BAH01574.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 483
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 172/381 (45%), Gaps = 65/381 (17%)
Query: 83 LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT 142
L+ LD + C +ISD G++H+ + +L L + +T G+ A + LINL LDL
Sbjct: 4 LKELDLSRCSKISDAGIKHIASIESLEKLHVSQT-GLTDNGVMAISSLINLRLLDLGGVR 62
Query: 143 RIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKG 202
L +L+ L +LE L+I W + IT+ L T+L L IS ++VT L
Sbjct: 63 FTDKALRSLQVLTQLEHLDI-WGSEITNEGASVLIAFTSLSFLNISWTRVT-----CLPI 116
Query: 203 LQKLTLLNLEGCPVTAAC-------------LDSLSALG------------SLFYLNLNR 237
L L LN+ C + + C + S ++ G SL YL+++
Sbjct: 117 LPTLRCLNMSNCTIHSICNGEFQVLIHLEKLIISAASFGNIDEVFSSILPSSLTYLDMSS 176
Query: 238 CQLSD----------------------DGCEKFSKIG-SLKVLNLGFNEITDECLVHLKG 274
C S+ D E + IG +LK L+L +E+T + L L G
Sbjct: 177 CSSSNLYFLGNMRNLEHLDLSYSRIISDAIEYIANIGMNLKFLSLSNSEVTSQALCVLAG 236
Query: 275 -LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT---------QVGSSGLRHLSGLT 324
+ +L +L+L I D L+ ++ + +L+ L LS T V L L L
Sbjct: 237 TVPSLTTLSLAHTKIDDSALLYISMMPSLRILNLSRTCIKGFMMENSVKVLSLSALEELK 296
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI 384
LES+NL+ T + D + LA L +LK L L + ++D L AL+S + L HL G +
Sbjct: 297 YLESLNLNNTQLMDDVIPPLASLRALKYLFLKSDFLSDPALHALSSASNLIHLGFCGNIL 356
Query: 385 TDSGAAYLRNFKNLRSLEICG 405
+ +G LR L++ G
Sbjct: 357 STTGLRKFVPPATLRMLDLSG 377
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 154/329 (46%), Gaps = 41/329 (12%)
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV 216
L+ L++ C+ I+D+ +K ++ + +L+ L +S + +TD+G+ + L L LL+L G
Sbjct: 4 LKELDLSRCSKISDAGIKHIASIESLEKLHVSQTGLTDNGVMAISSLINLRLLDLGGVRF 63
Query: 217 TAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT----------- 265
T L SL L L +L++ +++++G SL LN+ + +T
Sbjct: 64 TDKALRSLQVLTQLEHLDIWGSEITNEGASVLIAFTSLSFLNISWTRVTCLPILPTLRCL 123
Query: 266 --DECLVH------LKGLTNLESLNLDSCGIG--DEGLVNLTGLCNLKCLELSDTQVGSS 315
C +H + L +LE L + + G DE ++ +L L++S SS
Sbjct: 124 NMSNCTIHSICNGEFQVLIHLEKLIISAASFGNIDEVFSSILP-SSLTYLDMSS--CSSS 180
Query: 316 GLRHLSGLTNLESINLSFTGISDGSLRKLAGLS-SLKSLNLDARQITDTGLAALT-SLTG 373
L L + NLE ++LS++ I ++ +A + +LK L+L ++T L L ++
Sbjct: 181 NLYFLGNMRNLEHLDLSYSRIISDAIEYIANIGMNLKFLSLSNSEVTSQALCVLAGTVPS 240
Query: 374 LTHLDLFGARITDSGAAYLRNFKNLRSLEI---CGGGLTDAG------------LTGLVS 418
LT L L +I DS Y+ +LR L + C G L L S
Sbjct: 241 LTTLSLAHTKIDDSALLYISMMPSLRILNLSRTCIKGFMMENSVKVLSLSALEELKYLES 300
Query: 419 LNVSNSRITSAGLRHLKPLKNLRSLTLES 447
LN++N+++ + L L+ L+ L L+S
Sbjct: 301 LNLNNTQLMDDVIPPLASLRALKYLFLKS 329
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 95/170 (55%), Gaps = 4/170 (2%)
Query: 302 LKCLELSD-TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
LK L+LS +++ +G++H++ + +LE +++S TG++D + ++ L +L+ L+L +
Sbjct: 4 LKELDLSRCSKISDAGIKHIASIESLEKLHVSQTGLTDNGVMAISSLINLRLLDLGGVRF 63
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLT-DAGLTGLVSL 419
TD L +L LT L HLD++G+ IT+ GA+ L F +L L I +T L L L
Sbjct: 64 TDKALRSLQVLTQLEHLDIWGSEITNEGASVLIAFTSLSFLNISWTRVTCLPILPTLRCL 123
Query: 420 NVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSF 469
N+SN I S + L +L L + + +I + S LP+ +++
Sbjct: 124 NMSNCTIHSICNGEFQVLIHLEKLIISAASF--GNIDEVFSSILPSSLTY 171
>gi|290974964|ref|XP_002670214.1| predicted protein [Naegleria gruberi]
gi|284083770|gb|EFC37470.1| predicted protein [Naegleria gruberi]
Length = 383
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 132/253 (52%), Gaps = 14/253 (5%)
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
++ + L L+++ ++ D+G + S++ L L++G+N I + + + +L SL++
Sbjct: 123 ITEMKQLKSLDISENRIGDEGAKFISEMKQLTSLDIGYNRIGVVGVKFINEMKHLTSLDI 182
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
GIGDEG+ +++ L L L+ ++ ++G G + +S + +L ++++ I R
Sbjct: 183 SGNGIGDEGVKSISELKQLTSLDFNNNRIGDKGAKSISEMKHLTLLSINNNHIGAEGARF 242
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
++ + LKSL++ QI D G + + LT LD+ G I G + K L SLEI
Sbjct: 243 ISEMKQLKSLSIYNNQIGDEGAKFINEMKQLTSLDISGNEIGVEGVIPISEMKQLTSLEI 302
Query: 404 CGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL-------ESCKV 450
G + D G + L+SLN+ N++I G + + +K L+SL + E K
Sbjct: 303 GGNQIGDEGAKLISEMKQLISLNIYNNQIGIEGAKFISEMKQLKSLYIGGNQIGDEGVKF 362
Query: 451 TANDIKRLQSRDL 463
+ ++K+L S D+
Sbjct: 363 IS-EMKQLTSLDI 374
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 132/255 (51%), Gaps = 1/255 (0%)
Query: 160 LNIKWCNCITDS-DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
+N+K+ + DS +K ++ + LKSL IS +++ D G ++ +++LT L++ +
Sbjct: 106 VNLKFSRRLLDSIQVKFITEMKQLKSLDISENRIGDEGAKFISEMKQLTSLDIGYNRIGV 165
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
+ ++ + L L+++ + D+G + S++ L L+ N I D+ + + +L
Sbjct: 166 VGVKFINEMKHLTSLDISGNGIGDEGVKSISELKQLTSLDFNNNRIGDKGAKSISEMKHL 225
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
L++++ IG EG ++ + LK L + + Q+G G + ++ + L S+++S I
Sbjct: 226 TLLSINNNHIGAEGARFISEMKQLKSLSIYNNQIGDEGAKFINEMKQLTSLDISGNEIGV 285
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 398
+ ++ + L SL + QI D G ++ + L L+++ +I GA ++ K L
Sbjct: 286 EGVIPISEMKQLTSLEIGGNQIGDEGAKLISEMKQLISLNIYNNQIGIEGAKFISEMKQL 345
Query: 399 RSLEICGGGLTDAGL 413
+SL I G + D G+
Sbjct: 346 KSLYIGGNQIGDEGV 360
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
+ +L+SL+I N I D K +S + L SL I +++ G+ ++ ++ LT L++ G
Sbjct: 126 MKQLKSLDISE-NRIGDEGAKFISEMKQLTSLDIGYNRIGVVGVKFINEMKHLTSLDISG 184
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
+ + S+S L L L+ N ++ D G + S++ L +L++ N I E +
Sbjct: 185 NGIGDEGVKSISELKQLTSLDFNNNRIGDKGAKSISEMKHLTLLSINNNHIGAEGARFIS 244
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
+ L+SL++ + IGDEG + + L L++S ++G G+ +S + L S+ +
Sbjct: 245 EMKQLKSLSIYNNQIGDEGAKFINEMKQLTSLDISGNEIGVEGVIPISEMKQLTSLEIGG 304
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
I D + ++ + L SLN+ QI G ++ + L L + G +I D G ++
Sbjct: 305 NQIGDEGAKLISEMKQLISLNIYNNQIGIEGAKFISEMKQLKSLYIGGNQIGDEGVKFIS 364
Query: 394 NFKNLRSLEI 403
K L SL+I
Sbjct: 365 EMKQLTSLDI 374
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 125/248 (50%), Gaps = 7/248 (2%)
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGL--MK-LESLNIKWCNCITDSDM 173
N I +G K + + L LD+ RI G+V +K + MK L SL+I N I D +
Sbjct: 137 NRIGDEGAKFISEMKQLTSLDI-GYNRI--GVVGVKFINEMKHLTSLDIS-GNGIGDEGV 192
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K +S L L SL + +++ D G + ++ LTLL++ + A +S + L L
Sbjct: 193 KSISELKQLTSLDFNNNRIGDKGAKSISEMKHLTLLSINNNHIGAEGARFISEMKQLKSL 252
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
++ Q+ D+G + +++ L L++ NEI E ++ + + L SL + IGDEG
Sbjct: 253 SIYNNQIGDEGAKFINEMKQLTSLDISGNEIGVEGVIPISEMKQLTSLEIGGNQIGDEGA 312
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
++ + L L + + Q+G G + +S + L+S+ + I D ++ ++ + L SL
Sbjct: 313 KLISEMKQLISLNIYNNQIGIEGAKFISEMKQLKSLYIGGNQIGDEGVKFISEMKQLTSL 372
Query: 354 NLDARQIT 361
++ +I
Sbjct: 373 DIGYNEIV 380
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 150/318 (47%), Gaps = 15/318 (4%)
Query: 6 ISQQIFNELVYSRCLTEVSLEAFRDCALQDLCL-GQYPG--VNDKW----MDVIA----S 54
IS+Q FN + L + F + + +LC+ Q+ VN K+ +D I +
Sbjct: 66 ISKQFFNVIKERSKLVIKFKQKFTETRI-ELCMKSQFMNSIVNLKFSRRLLDSIQVKFIT 124
Query: 55 QGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
+ L S+D+S + + D G + + L SLD + +I G++ + + +LTSL
Sbjct: 125 EMKQLKSLDISENRIGDEGAKFISEMKQLTSLDIGYN-RIGVVGVKFINEMKHLTSLDI- 182
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N I +G+K+ + L L LD G ++ + L L+I N I +
Sbjct: 183 SGNGIGDEGVKSISELKQLTSLDFNNNRIGDKGAKSISEMKHLTLLSIN-NNHIGAEGAR 241
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
+S + LKSL I +++ D G ++ +++LT L++ G + + +S + L L
Sbjct: 242 FISEMKQLKSLSIYNNQIGDEGAKFINEMKQLTSLDISGNEIGVEGVIPISEMKQLTSLE 301
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
+ Q+ D+G + S++ L LN+ N+I E + + L+SL + IGDEG+
Sbjct: 302 IGGNQIGDEGAKLISEMKQLISLNIYNNQIGIEGAKFISEMKQLKSLYIGGNQIGDEGVK 361
Query: 295 NLTGLCNLKCLELSDTQV 312
++ + L L++ ++
Sbjct: 362 FISEMKQLTSLDIGYNEI 379
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 3/207 (1%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L S+D+SG+ + D G+ + + L SLDFN +I D G + + + +LT LS NN
Sbjct: 177 LTSLDISGNGIGDEGVKSISELKQLTSLDFNNN-RIGDKGAKSISEMKHLTLLSIN-NNH 234
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
I A+G + + + L L + G + + +L SL+I N I + P+S
Sbjct: 235 IGAEGARFISEMKQLKSLSIYNNQIGDEGAKFINEMKQLTSLDIS-GNEIGVEGVIPISE 293
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+ L SL+I +++ D G + +++L LN+ + +S + L L +
Sbjct: 294 MKQLTSLEIGGNQIGDEGAKLISEMKQLISLNIYNNQIGIEGAKFISEMKQLKSLYIGGN 353
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEIT 265
Q+ D+G + S++ L L++G+NEI
Sbjct: 354 QIGDEGVKFISEMKQLTSLDIGYNEIV 380
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
++ + + LKSL++ +I D G ++ + LT LD+ RI G ++ K+L
Sbjct: 119 QVKFITEMKQLKSLDISENRIGDEGAKFISEMKQLTSLDIGYNRIGVVGVKFINEMKHLT 178
Query: 400 SLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA- 452
SL+I G G+ D G L L SL+ +N+RI G + + +K+L L++ + + A
Sbjct: 179 SLDISGNGIGDEGVKSISELKQLTSLDFNNNRIGDKGAKSISEMKHLTLLSINNNHIGAE 238
Query: 453 -----NDIKRLQSRDLPN 465
+++K+L+S + N
Sbjct: 239 GARFISEMKQLKSLSIYN 256
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 12/113 (10%)
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG 406
++S+ +L R + + +T + L LD+ RI D GA ++ K L SL+I
Sbjct: 102 MNSIVNLKFSRRLLDSIQVKFITEMKQLKSLDISENRIGDEGAKFISEMKQLTSLDI--- 158
Query: 407 GLTDAGLTG---------LVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
G G+ G L SL++S + I G++ + LK L SL + ++
Sbjct: 159 GYNRIGVVGVKFINEMKHLTSLDISGNGIGDEGVKSISELKQLTSLDFNNNRI 211
>gi|290974552|ref|XP_002670009.1| predicted protein [Naegleria gruberi]
gi|284083563|gb|EFC37265.1| predicted protein [Naegleria gruberi]
Length = 445
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 169/395 (42%), Gaps = 34/395 (8%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
L +D+ G+++ + G ++ + L L+ I + G++++ G+ LT L+ NN
Sbjct: 64 QLTQLDIDGNNIDEEGAKYISEMQYLAILNM-LGNNIGNEGVKYISGMKQLTHLNVSENN 122
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS 177
I G+K + L L++ + N I D K +
Sbjct: 123 -IGLDGVKYIVEMKQLTHLNIGQ-------------------------NSIGDEGAKLIG 156
Query: 178 GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
+T L L I ++ GI ++ L KLT LN+ + +S + L YL ++
Sbjct: 157 EMTQLLDLCIFYCGISSEGIKHISKLDKLTDLNISSNMLYDDSTKYISGMNQLTYLRIHD 216
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
+ D+G + K+ L +N+ NE+T E + L GL L +++ S IGD G ++
Sbjct: 217 NNIGDEGAKFLGKMKQLTGINIWRNELTAEGVKFLTGLDKLTEIDISSNNIGDNGAKYIS 276
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA 357
+ L L++SD +G G +++ + L + L I + ++ L L L++
Sbjct: 277 EMKQLTNLDVSDNNIGEEGAKYIGNMKQLTILTLWKNNIRGEGAKYISKLEKLTELDISE 336
Query: 358 RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA------ 411
I + G ++ ++ L LD+ I + GA Y++ K L L I + +
Sbjct: 337 NHIDEKGAKYISEMSQLNALDISVNIIGNQGAKYIKEMKQLTDLLIWDNNIIEQEEHPKE 396
Query: 412 -GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
L +N+++++ L + K L+ L L
Sbjct: 397 IKEVSTTPLAETNTKLSTPSLDNTKGLRKLIGLAF 431
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 130/280 (46%), Gaps = 6/280 (2%)
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
D K L L L L I + + + G Y+ +Q L +LN+ G + + +S + L
Sbjct: 55 DCKKLGLLKQLTQLDIDGNNIDEEGAKYISEMQYLAILNMLGNNIGNEGVKYISGMKQLT 114
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
+LN++ + DG + ++ L LN+G N I DE + +T L L + CGI E
Sbjct: 115 HLNVSENNIGLDGVKYIVEMKQLTHLNIGQNSIGDEGAKLIGEMTQLLDLCIFYCGISSE 174
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
G+ +++ L L L +S + +++SG+ L + + I D + L + L
Sbjct: 175 GIKHISKLDKLTDLNISSNMLYDDSTKYISGMNQLTYLRIHDNNIGDEGAKFLGKMKQLT 234
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
+N+ ++T G+ LT L LT +D+ I D+GA Y+ K L +L++ + +
Sbjct: 235 GINIWRNELTAEGVKFLTGLDKLTEIDISSNNIGDNGAKYISEMKQLTNLDVSDNNIGEE 294
Query: 412 G------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
G + L L + + I G +++ L+ L L +
Sbjct: 295 GAKYIGNMKQLTILTLWKNNIRGEGAKYISKLEKLTELDI 334
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 38 LGQYPGVNDKWMDVIASQGSSLLS-------VDLSGSDVTDSGLIHLKDCSNLQSLDFNF 90
+ Q G+N W + + ++G L+ +D+S +++ D+G ++ + L +LD +
Sbjct: 230 MKQLTGIN-IWRNELTAEGVKFLTGLDKLTEIDISSNNIGDNGAKYISEMKQLTNLDVSD 288
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN 150
I + G +++ + LT L+ +NN I +G K + L L +LD+
Sbjct: 289 N-NIGEEGAKYIGNMKQLTILTLWKNN-IRGEGAKYISKLEKLTELDISE---------- 336
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
N I + K +S ++ L +L IS + + + G Y+K +++LT
Sbjct: 337 ---------------NHIDEKGAKYISEMSQLNALDISVNIIGNQGAKYIKEMKQLT 378
>gi|431930507|ref|YP_007243553.1| TIR domain-containing protein [Thioflavicoccus mobilis 8321]
gi|431828810|gb|AGA89923.1| TIR domain-containing protein [Thioflavicoccus mobilis 8321]
Length = 1283
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 123/353 (34%), Positives = 168/353 (47%), Gaps = 40/353 (11%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L S+D + + V +GL L D + L+SLD +++D L L+ LT L F
Sbjct: 162 TNLRSLDCAYTPV--AGLEPLADLTTLKSLDCRH-TRVAD-----LAPLAGLTELQFLDC 213
Query: 117 NAITAQGMKAFAGLINLVKLDLERC--TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
++ A L NL LD C TR+ L L GL L++L+ C +D+
Sbjct: 214 GDTRVADLEPVASLANLQSLD---CGGTRVVD-LTPLAGLANLQALD---CGFTQVADLA 266
Query: 175 PLSGLTNLKSLQISCSKVTDSG-IAYLKGLQKLTLLNLEGCPVTA-ACLDSLSALGSLFY 232
PL+ LTNL+SL + VTD G +A L LQ L C T A L L+ L +L
Sbjct: 267 PLASLTNLQSLDCRSAPVTDLGPLASLGNLQSLI------CQFTPVADLAPLAGLTNLLS 320
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
LN + D + IG+L+ LN + D L L GLTNL SL + D
Sbjct: 321 LNCWNTPVID--LAPLASIGNLQSLNCSSTPVAD--LASLAGLTNLRSLECAGSPVTD-- 374
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
L L GL NL+ L+ T V G L LTNL S++ FT ++D L LAGL++L+S
Sbjct: 375 LAPLAGLTNLRSLDCEGTPVADLG--PLINLTNLRSLDCGFTRVTD--LAPLAGLTNLQS 430
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
L RQ LA L +L L RITD L + N+ SL+ CG
Sbjct: 431 LI--CRQTPVADLAPLAALNNLQSFACGNTRITD--LTPLADLANMESLD-CG 478
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 156/327 (47%), Gaps = 40/327 (12%)
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD------------- 194
L NL L L +L C+ +D+ PL+GLTNL++L C+ VTD
Sbjct: 108 LSNLGFLAGLTALQYLKCSSTQVADLTPLAGLTNLQALDCGCTPVTDLTPLAGLTNLRSL 167
Query: 195 ----SGIAYLKGLQKLTLLNLEGCPVT-AACLDSLSALGSLFYLNLNRCQLSDDGCEKFS 249
+ +A L+ L LT L C T A L L+ L L +L+ +++D E +
Sbjct: 168 DCAYTPVAGLEPLADLTTLKSLDCRHTRVADLAPLAGLTELQFLDCGDTRVAD--LEPVA 225
Query: 250 KIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD-EGLVNLTGLCNLKCLELS 308
+ +L+ L+ G + D L L GL NL++L+ + D L +LT L +L C
Sbjct: 226 SLANLQSLDCGGTRVVD--LTPLAGLANLQALDCGFTQVADLAPLASLTNLQSLDCRSAP 283
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
T +G L+ L NL+S+ FT ++D L LAGL++L SLN + D LA L
Sbjct: 284 VTDLGP-----LASLGNLQSLICQFTPVAD--LAPLAGLTNLLSLNCWNTPVID--LAPL 334
Query: 369 TSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNS 424
S+ L L+ + D A L NLRSLE G +TD AGLT L SL+ +
Sbjct: 335 ASIGNLQSLNCSSTPVAD--LASLAGLTNLRSLECAGSPVTDLAPLAGLTNLRSLDCEGT 392
Query: 425 RITSAGLRHLKPLKNLRSLTLESCKVT 451
+ A L L L NLRSL +VT
Sbjct: 393 PV--ADLGPLINLTNLRSLDCGFTRVT 417
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 141/325 (43%), Gaps = 62/325 (19%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L S+D + VTD G L NLQSL F ++D L L GL+NL SL+
Sbjct: 272 TNLQSLDCRSAPVTDLG--PLASLGNLQSLICQF-TPVAD--LAPLAGLTNLLSLNCWNT 326
Query: 117 NAI-------------------TAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
I + + AGL NL L+ L L GL L
Sbjct: 327 PVIDLAPLASIGNLQSLNCSSTPVADLASLAGLTNLRSLECAGSPVTD--LAPLAGLTNL 384
Query: 158 ESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
SL+ C +D+ PL LTNL+SL ++VTD +A L GL L L PV
Sbjct: 385 RSLD---CEGTPVADLGPLINLTNLRSLDCGFTRVTD--LAPLAGLTNLQSLICRQTPV- 438
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD--ECLVHL--- 272
A L L+AL +L +++D + + +++ L+ G I++ E +V L
Sbjct: 439 -ADLAPLAALNNLQSFACGNTRITD--LTPLADLANMESLDCGETPISNLPEAIVWLPRL 495
Query: 273 --------KGLTNLESLNLDSCGIGDEGLVNL-----------TGLCNLKCLELSDTQVG 313
GLTN+ + L S G GD L+ L L ++K + L + +VG
Sbjct: 496 ERLILMPHPGLTNIPAEVL-SQGHGDNCLLRLRTHLTDLGAGAKPLQDIKVIVLGNGRVG 554
Query: 314 SSGL-RHLSGLTNLESINLSFTGIS 337
+ L R L G + +E+ + S GIS
Sbjct: 555 KTQLCRRLRGKSFVENAD-STHGIS 578
>gi|300691489|ref|YP_003752484.1| type III effector protein [Ralstonia solanacearum PSI07]
gi|299078549|emb|CBJ51205.2| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
solanacearum PSI07]
Length = 533
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 197/415 (47%), Gaps = 28/415 (6%)
Query: 72 SGLIHLKDCSNLQSLD-FNFCIQISDGGLEHLRGL-SNLTSLSFRR-NNAITAQGMKAFA 128
+GL +K N +L+ +D LRGL ++LT L R ITA G+ +
Sbjct: 106 AGLAGVKRAGNYPALEKLTLIGPFTD---NDLRGLPASLTELDLSRCRGPITAAGIAHLS 162
Query: 129 GLINLVKLDLERCTRI--HGG--LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
L LV+L++ R RI G L N L L+ N + I + L+ T L +
Sbjct: 163 HLP-LVRLNV-RDQRIGVEGARLLANHPTLTSLDVSNGR----IGPEGARALADNTRLTT 216
Query: 185 LQISCSKVTDSGIAYLKGLQKLTLLNLE--GCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L +S +++ G L + LT L++ G AC +L+ L LN+NR ++
Sbjct: 217 LSVSHNRIGAEGAKALAASETLTSLDISENGIGDEGAC--ALATNTKLTTLNVNRNRIGV 274
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNL 302
+G + + +L L++G N+I DE + L L +LN++ +G +G+ L L
Sbjct: 275 EGAKALAAGEALTSLDIGGNDIGDEGVRALAANARLTTLNVERTRVGADGVGALAASKTL 334
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
L + +G +G R L+ T+L ++++ GIS + LA ++L +LNL I D
Sbjct: 335 TSLRIDSNNIGDAGARALATNTSLTTLHIESNGISPAGAQALAANTTLTTLNLGYNGIGD 394
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS---- 418
G A ++ T L L + ++D+GA L K + +L+ + DAG L +
Sbjct: 395 AGAQAWSANTTLISLSVRRNGLSDAGATILAASKTMTTLDAGDNTIRDAGARALAANRTL 454
Query: 419 --LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKR-LQSRDLPNL-VSF 469
L+V ++ I +AG R L L SL L + +VT ++ L +R L +L VSF
Sbjct: 455 TTLDVRSNEIENAGARALAANTWLASLDLRNNRVTEAGVRALLANRTLSSLGVSF 509
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 142/312 (45%), Gaps = 12/312 (3%)
Query: 114 RRNNAITAQGMKAFA-GLINLVKLDLER-CTRIHGGLVNLK---GLMKLESLNIKWCNCI 168
RR+ + Q ++A + L V+ D+ + R GL +K LE L +
Sbjct: 72 RRSKPLAVQRLRAVSKPLKAAVEADMRQLVIRDRAGLAGVKRAGNYPALEKLTL--IGPF 129
Query: 169 TDSDMKPLSGLTNLKSLQIS-C-SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA 226
TD+D++ L +L L +S C +T +GIA+L L L LN+ + L+
Sbjct: 130 TDNDLRGLPA--SLTELDLSRCRGPITAAGIAHLSHL-PLVRLNVRDQRIGVEGARLLAN 186
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC 286
+L L+++ ++ +G + L L++ N I E L L SL++
Sbjct: 187 HPTLTSLDVSNGRIGPEGARALADNTRLTTLSVSHNRIGAEGAKALAASETLTSLDISEN 246
Query: 287 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAG 346
GIGDEG L L L ++ ++G G + L+ L S+++ I D +R LA
Sbjct: 247 GIGDEGACALATNTKLTTLNVNRNRIGVEGAKALAAGEALTSLDIGGNDIGDEGVRALAA 306
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG 406
+ L +LN++ ++ G+ AL + LT L + I D+GA L +L +L I
Sbjct: 307 NARLTTLNVERTRVGADGVGALAASKTLTSLRIDSNNIGDAGARALATNTSLTTLHIESN 366
Query: 407 GLTDAGLTGLVS 418
G++ AG L +
Sbjct: 367 GISPAGAQALAA 378
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 126/276 (45%), Gaps = 3/276 (1%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
+L S+D+S + + D G L + L +L+ N +I G + L LTSL N+
Sbjct: 237 TLTSLDISENGIGDEGACALATNTKLTTLNVNRN-RIGVEGAKALAAGEALTSLDIGGND 295
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS 177
I +G++A A L L++ER G+ L L SL I N I D+ + L+
Sbjct: 296 -IGDEGVRALAANARLTTLNVERTRVGADGVGALAASKTLTSLRID-SNNIGDAGARALA 353
Query: 178 GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
T+L +L I + ++ +G L LT LNL + A + SA +L L++ R
Sbjct: 354 TNTSLTTLHIESNGISPAGAQALAANTTLTTLNLGYNGIGDAGAQAWSANTTLISLSVRR 413
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
LSD G + ++ L+ G N I D L L +L++ S I + G L
Sbjct: 414 NGLSDAGATILAASKTMTTLDAGDNTIRDAGARALAANRTLTTLDVRSNEIENAGARALA 473
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
L L+L + +V +G+R L L S+ +SF
Sbjct: 474 ANTWLASLDLRNNRVTEAGVRALLANRTLSSLGVSF 509
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 3/230 (1%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
+ G +L S+D+ G+D+ D G+ L + L +L+ ++ G+ L LTSL
Sbjct: 281 AAGEALTSLDIGGNDIGDEGVRALAANARLTTLNVERT-RVGADGVGALAASKTLTSLRI 339
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
NN I G +A A +L L +E G L L +LN+ + N I D+
Sbjct: 340 DSNN-IGDAGARALATNTSLTTLHIESNGISPAGAQALAANTTLTTLNLGY-NGIGDAGA 397
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
+ S T L SL + + ++D+G L + +T L+ + A +L+A +L L
Sbjct: 398 QAWSANTTLISLSVRRNGLSDAGATILAASKTMTTLDAGDNTIRDAGARALAANRTLTTL 457
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
++ ++ + G + L L+L N +T+ + L L SL +
Sbjct: 458 DVRSNEIENAGARALAANTWLASLDLRNNRVTEAGVRALLANRTLSSLGV 507
>gi|149918909|ref|ZP_01907395.1| hypothetical protein PPSIR1_16600 [Plesiocystis pacifica SIR-1]
gi|149820283|gb|EDM79700.1| hypothetical protein PPSIR1_16600 [Plesiocystis pacifica SIR-1]
Length = 1503
Score = 97.4 bits (241), Expect = 2e-17, Method: Composition-based stats.
Identities = 80/236 (33%), Positives = 117/236 (49%), Gaps = 12/236 (5%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGI---AYLKGLQKLTLLNLEGCPVTAACLDSL 224
I D+ ++ LS LT L+ L +S + +T +G+ +++ GL +L+L + +G A + L
Sbjct: 90 IDDAMVEVLSKLTGLQILDLSRNAITATGVESLSWIGGLTQLSLRSNQGVGDRGA--EIL 147
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
++L SL LNL+RC + G + K+G L+ L L N I DE V L L L L L
Sbjct: 148 ASLRSLEVLNLDRCGIGPIGAQALGKLGELRELVLSHNRILDEGAVALAKLAKLRELELS 207
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG-LTNLESINLSFTGISDGSLRK 343
C +GDEG L L L+ L L VG +G L L+ + L+ + + R
Sbjct: 208 VCQLGDEGAAALAKLRALEILRLGGNHVGPKAAAAFAGHLDKLQELELAVNQVGEEGARS 267
Query: 344 LAG-LSSLKSLNLDARQITDTGLAALTSLTG-----LTHLDLFGARITDSGAAYLR 393
L+G L L+ L+L +I D GL L G L HLDL IT + LR
Sbjct: 268 LSGMLGHLRRLDLSYNKIGDAGLEGLLQPWGKRRVALEHLDLIENGITLVSPSVLR 323
Score = 77.8 bits (190), Expect = 1e-11, Method: Composition-based stats.
Identities = 73/220 (33%), Positives = 107/220 (48%), Gaps = 6/220 (2%)
Query: 201 KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG 260
+GL++L L+ L+ + A ++ LS L L L+L+R ++ G E S IG L L+L
Sbjct: 78 QGLERLALVALD---IDDAMVEVLSKLTGLQILDLSRNAITATGVESLSWIGGLTQLSLR 134
Query: 261 FNE-ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
N+ + D L L +LE LNLD CGIG G L L L+ L LS ++ G
Sbjct: 135 SNQGVGDRGAEILASLRSLEVLNLDRCGIGPIGAQALGKLGELRELVLSHNRILDEGAVA 194
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS-LTGLTHLD 378
L+ L L + LS + D LA L +L+ L L + AA L L L+
Sbjct: 195 LAKLAKLRELELSVCQLGDEGAAALAKLRALEILRLGGNHVGPKAAAAFAGHLDKLQELE 254
Query: 379 LFGARITDSGAAYLRN-FKNLRSLEICGGGLTDAGLTGLV 417
L ++ + GA L +LR L++ + DAGL GL+
Sbjct: 255 LAVNQVGEEGARSLSGMLGHLRRLDLSYNKIGDAGLEGLL 294
Score = 66.2 bits (160), Expect = 3e-08, Method: Composition-based stats.
Identities = 75/262 (28%), Positives = 117/262 (44%), Gaps = 37/262 (14%)
Query: 92 IQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVN 150
+ I D +E L L+ L L RN AITA G+++ + + L +L L + G
Sbjct: 88 LDIDDAMVEVLSKLTGLQILDLSRN-AITATGVESLSWIGGLTQLSLRSNQGVGDRGAEI 146
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
L L LE LN+ C I + L L L+ L +S +++ D G
Sbjct: 147 LASLRSLEVLNLDRCG-IGPIGAQALGKLGELRELVLSHNRILDEGAV------------ 193
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
+L+ L L L L+ CQL D+G +K+ +L++L LG N + +
Sbjct: 194 ------------ALAKLAKLRELELSVCQLGDEGAAALAKLRALEILRLGGNHVGPKAAA 241
Query: 271 HLKG-LTNLESLNLDSCGIGDEGLVNLTG-LCNLKCLELSDTQVGSSGLRHL-------- 320
G L L+ L L +G+EG +L+G L +L+ L+LS ++G +GL L
Sbjct: 242 AFAGHLDKLQELELAVNQVGEEGARSLSGMLGHLRRLDLSYNKIGDAGLEGLLQPWGKRR 301
Query: 321 SGLTNLESINLSFTGISDGSLR 342
L +L+ I T +S LR
Sbjct: 302 VALEHLDLIENGITLVSPSVLR 323
Score = 58.5 bits (140), Expect = 8e-06, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 42/268 (15%)
Query: 237 RCQLSDDGCEKFSKI----GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
RC +S G + + + L+ L L +I D + L LT L+ L+L I G
Sbjct: 59 RCFVSGFGADVLAALVERGQGLERLALVALDIDDAMVEVLSKLTGLQILDLSRNAITATG 118
Query: 293 LVNLTGLCNLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
+ +L+ + L L L Q VG G L+ L +LE +NL GI + L L L+
Sbjct: 119 VESLSWIGGLTQLSLRSNQGVGDRGAEILASLRSLEVLNLDRCGIGPIGAQALGKLGELR 178
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG----------------------- 388
L L +I D G AL L L L+L ++ D G
Sbjct: 179 ELVLSHNRILDEGAVALAKLAKLRELELSVCQLGDEGAAALAKLRALEILRLGGNHVGPK 238
Query: 389 --AAYLRNFKNLRSLEICGGGLTDAG---LTGLVS----LNVSNSRITSAGLRHLKPLKN 439
AA+ + L+ LE+ + + G L+G++ L++S ++I AGL L
Sbjct: 239 AAAAFAGHLDKLQELELAVNQVGEEGARSLSGMLGHLRRLDLSYNKIGDAGLEGLLQPWG 298
Query: 440 LRSLTLESCKVTANDI-----KRLQSRD 462
R + LE + N I L++RD
Sbjct: 299 KRRVALEHLDLIENGITLVSPSVLRTRD 326
>gi|149173873|ref|ZP_01852502.1| hypothetical protein PM8797T_05530 [Planctomyces maris DSM 8797]
gi|148847403|gb|EDL61737.1| hypothetical protein PM8797T_05530 [Planctomyces maris DSM 8797]
Length = 473
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 163/378 (43%), Gaps = 49/378 (12%)
Query: 117 NAITAQGMKAFAGLINLVKLD-LERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
N A G F+ + D L TR+ G L + ++ N + + K
Sbjct: 72 NKPEAGGGYYFSNYFDYCSEDELPMLTRVEG----------LRAFDMFDGNSFSPAGWKQ 121
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT---LLN--LEGCPVTAACLDSLSALGSL 230
+ ++ L++ +SC VTD + L+GL +L +LN ++ PV+ L LS+ +L
Sbjct: 122 IGQISGLEAFNVSCQYVTDEHLMGLQGLPQLKDLKILNNCMKQSPVSDQGLQVLSSFPAL 181
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L L+ +++ GCE L+ L L + ITDECL L L NL+ L + D
Sbjct: 182 RRLVLHSREINVRGCELIGDCTELRALEL-WGPITDECLKPLGKLKNLKHLIVVGT-FSD 239
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGL------------------------RHLSGLTNL 326
GL +L+GL L L L Q+ SGL + L L L
Sbjct: 240 AGLKHLSGLKQLTRLVLHSDQMTGSGLNSFAEAPELREFGFSGSPAGNATLKQLDQLPGL 299
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
+NLS ++D L+ + L L++L+L ITD GL AL + L L L+ IT+
Sbjct: 300 AVLNLSTPSVNDAVLQTMPDLPQLEALSLKNSNITDKGLDALVKVKNLRELVLYSTEITN 359
Query: 387 SGAAYLRNFKNLRSLEICGGGLTD-------AGLTGLVSLNVSNSRITSAGLRHLKPLKN 439
+G L + LR L + G T+ LT L L V + +A L+PL
Sbjct: 360 AGLIRLEPLQQLRLLVLGNPGHTELITGKGLESLTKLSRLEVLDIDYVNAEQLDLRPLAR 419
Query: 440 LRSLTLESCKVTANDIKR 457
SL ++D+++
Sbjct: 420 CSSLVEVILNFGSDDVRK 437
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 131/292 (44%), Gaps = 57/292 (19%)
Query: 25 LEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQ 84
L +D + + C+ Q P V+D+ + V++S +L + L ++ G + DC+ L+
Sbjct: 149 LPQLKDLKILNNCMKQSP-VSDQGLQVLSS-FPALRRLVLHSREINVRGCELIGDCTELR 206
Query: 85 SLDF-----NFCIQ----------------ISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
+L+ + C++ SD GL+HL GL LT L ++ +T G
Sbjct: 207 ALELWGPITDECLKPLGKLKNLKHLIVVGTFSDAGLKHLSGLKQLTRLVL-HSDQMTGSG 265
Query: 124 MKAFA------------------------GLINLVKLDLERCTRIHGGLVNLKGLMKLES 159
+ +FA L L L+L + L + L +LE+
Sbjct: 266 LNSFAEAPELREFGFSGSPAGNATLKQLDQLPGLAVLNLSTPSVNDAVLQTMPDLPQLEA 325
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP---- 215
L++K N ITD + L + NL+ L + +++T++G+ L+ LQ+L LL L G P
Sbjct: 326 LSLKNSN-ITDKGLDALVKVKNLRELVLYSTEITNAGLIRLEPLQQLRLLVL-GNPGHTE 383
Query: 216 -VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSL--KVLNLGFNEI 264
+T L+SL+ L L L+++ ++ SL +LN G +++
Sbjct: 384 LITGKGLESLTKLSRLEVLDIDYVNAEQLDLRPLARCSSLVEVILNFGSDDV 435
>gi|46447283|ref|YP_008648.1| hypothetical protein pc1649 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400924|emb|CAF24373.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 521
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 101/178 (56%), Gaps = 3/178 (1%)
Query: 65 SGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
S +TD+GL L +NLQ L+ N C +++D GL HL L NL L + +T++G+
Sbjct: 324 SCHHLTDTGLACLPSLTNLQYLNLNGCKKLTDAGLAHLTPLVNLQYLDLGFCDKLTSKGL 383
Query: 125 KAFAGLINLVKLDLERCTRIH-GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
F LI L L+L C I GL +L L+ L+ LN+ C +TD+ + L L LK
Sbjct: 384 GHFKSLIALQHLNLSGCKFIRDNGLAHLTPLVALQYLNLSQCTFLTDAGLAHLVPLVALK 443
Query: 184 SLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQ 239
L +S C+ +T++G+A+L L L LNL GC ++ A L L+ L SL +LNL C+
Sbjct: 444 HLDLSWCNSLTNAGLAHLVHLVALQYLNLSGCIYLSEAGLAHLAPLTSLQHLNLEDCE 501
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 115/208 (55%), Gaps = 7/208 (3%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
++E LN +TD+ + L NLK LQ+ SC +TD+G+A L L L LNL GC
Sbjct: 291 EIEGLNFSENAYLTDAHLLALKNCKNLKVLQLQSCHHLTDTGLACLPSLTNLQYLNLNGC 350
Query: 215 -PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVH 271
+T A L L+ L +L YL+L C +L+ G F + +L+ LNL G I D L H
Sbjct: 351 KKLTDAGLAHLTPLVNLQYLDLGFCDKLTSKGLGHFKSLIALQHLNLSGCKFIRDNGLAH 410
Query: 272 LKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNLESI 329
L L L+ LNL C + D GL +L L LK L+LS + ++GL HL L L+ +
Sbjct: 411 LTPLVALQYLNLSQCTFLTDAGLAHLVPLVALKHLDLSWCNSLTNAGLAHLVHLVALQYL 470
Query: 330 NLS-FTGISDGSLRKLAGLSSLKSLNLD 356
NLS +S+ L LA L+SL+ LNL+
Sbjct: 471 NLSGCIYLSEAGLAHLAPLTSLQHLNLE 498
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 113/221 (51%), Gaps = 26/221 (11%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD+ L+ LK+C NL+ L C ++D GL L L+NL L+ +T G+
Sbjct: 303 LTDAHLLALKNCKNLKVLQLQSCHHLTDTGLACLPSLTNLQYLNLNGCKKLTDAGLAHLT 362
Query: 129 GLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L+NL LDL C ++ GL + K L+ L+ LN+ C I D+ + L+ L L+ L +
Sbjct: 363 PLVNLQYLDLGFCDKLTSKGLGHFKSLIALQHLNLSGCKFIRDNGLAHLTPLVALQYLNL 422
Query: 188 S-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQLSDDGC 245
S C+ +TD+G+A+L L L L+L C +T A L L L +L YLNL+ GC
Sbjct: 423 SQCTFLTDAGLAHLVPLVALKHLDLSWCNSLTNAGLAHLVHLVALQYLNLS-------GC 475
Query: 246 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC 286
S+ G L HL LT+L+ LNL+ C
Sbjct: 476 IYLSEAG----------------LAHLAPLTSLQHLNLEDC 500
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 120/229 (52%), Gaps = 16/229 (6%)
Query: 246 EKFSKIGSLKVLNLGFNE---ITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCN 301
EK S ++ L F+E +TD L+ LK NL+ L L SC + D GL L L N
Sbjct: 282 EKILNYFSNEIEGLNFSENAYLTDAHLLALKNCKNLKVLQLQSCHHLTDTGLACLPSLTN 341
Query: 302 LKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-R 358
L+ L L+ ++ +GL HL+ L NL+ ++L F ++ L L +L+ LNL +
Sbjct: 342 LQYLNLNGCKKLTDAGLAHLTPLVNLQYLDLGFCDKLTSKGLGHFKSLIALQHLNLSGCK 401
Query: 359 QITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGL 416
I D GLA LT L L +L+L +TD+G A+L L+ L++ LT+AGL L
Sbjct: 402 FIRDNGLAHLTPLVALQYLNLSQCTFLTDAGLAHLVPLVALKHLDLSWCNSLTNAGLAHL 461
Query: 417 VSL------NVSNS-RITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
V L N+S ++ AGL HL PL +L+ L LE C+ N RL
Sbjct: 462 VHLVALQYLNLSGCIYLSEAGLAHLAPLTSLQHLNLEDCEHFTNARFRL 510
>gi|158336627|ref|YP_001517801.1| internalin A protein [Acaryochloris marina MBIC11017]
gi|158306868|gb|ABW28485.1| internalin A protein [Acaryochloris marina MBIC11017]
Length = 627
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 146/505 (28%), Positives = 228/505 (45%), Gaps = 93/505 (18%)
Query: 23 VSLEAFRDCALQDLCLGQYPGVNDKWM-DVIASQGSSLLS------VDLSGSDVTDSGLI 75
+SL+ L D + QYP ++ ++ D+++ + S + LSG DVT + +
Sbjct: 55 LSLQGVDGHELVDASIEQYPHLSALYLFDIVSPEIVPFASLPGLSTIALSGQDVTAASYL 114
Query: 76 H--------------------LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
L D NL LD + QI+D L ++ L LTSL
Sbjct: 115 QPTTNLTTVYLKTTNISDYSFLSDLKNLTHLDLSNN-QIAD--LSFIQDLKQLTSLGLAS 171
Query: 116 NNAITAQGMKA----------------FAGLINLVKL-DLERCTRIHGGLVNLKGLMKLE 158
N + G+K ++ L+NL +L L R L L+ L L
Sbjct: 172 NKIVDISGLKDLTKLNTLNLRSNAIDDYSVLLNLKELRQLTVSVREATDLAFLQDLKDLT 231
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
L++ + + I SD+ L L L L + +++ S IA L LQ+LT L+L ++
Sbjct: 232 HLDLSYNHWI--SDISVLRNLPKLTHLDLGSNQI--SNIAVLLDLQQLTHLSLSSNQISD 287
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
+ L L L L+++ +++D + L L++ NE++D + L+ LT L
Sbjct: 288 VSV--LQTLQGLERLDVSANEIADIAI--LQNLQGLTHLDISSNEVSDISV--LQDLTTL 341
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
LN+ S I D + L GL L L++SD Q+ S + L GL +L S+NLS+ +SD
Sbjct: 342 TQLNVSSNEIIDYSV--LQGLTQLTSLDVSDNQM--SEISDLQGLHSLTSLNLSYNQLSD 397
Query: 339 GS----LRKLAGLS----------------SLKSLNLDARQITDTGLAALTSLTGLTHLD 378
S L++LA L+ L +LNL QITD L+ L L GL LD
Sbjct: 398 ISVLQDLKQLATLNLSYNPVSDIAVLQNFKDLTTLNLSFTQITD--LSHLQDLKGLISLD 455
Query: 379 LFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG----LTGLVSLNVSNSRITSAGLRHL 434
L +ITD A L++ + L L + L+D L GL SLN+S ++I + L
Sbjct: 456 LHSNQITDISA--LQDLEGLYRLNVSDNQLSDIAALRKLKGLFSLNLSINQI--LDIAAL 511
Query: 435 KPLKNLRSLTLESCKVTANDIKRLQ 459
+ L L SL + +++ DI LQ
Sbjct: 512 QDLTRLTSLNVSHNQLS--DISVLQ 534
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 155/340 (45%), Gaps = 49/340 (14%)
Query: 62 VDLSGSDVTD-------SGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
+D+S +++ D GL HL SN ++SD + L+ L+ LT L+
Sbjct: 300 LDVSANEIADIAILQNLQGLTHLDISSN----------EVSDISV--LQDLTTLTQLNVS 347
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N I GL L LD+ + +L+GL L SLN+ + SD+
Sbjct: 348 SNEII---DYSVLQGLTQLTSLDVSDNQM--SEISDLQGLHSLTSLNLSYNQL---SDIS 399
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L L L +L +S + V+D IA L+ + LT LNL +T L L L L L+
Sbjct: 400 VLQDLKQLATLNLSYNPVSD--IAVLQNFKDLTTLNLSFTQITD--LSHLQDLKGLISLD 455
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
L+ Q++D + L LN+ N+++D + L+ L L SLNL I D +
Sbjct: 456 LHSNQITD--ISALQDLEGLYRLNVSDNQLSD--IAALRKLKGLFSLNLSINQILD--IA 509
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS-LRKLAGLSSLKSL 353
L L L L +S Q+ S + L GLT L S++L I+D S L+ + GL S
Sbjct: 510 ALQDLTRLTSLNVSHNQL--SDISVLQGLTRLNSLDLGANQIADISVLQNIPGLFS---- 563
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LD R + ++ GLT L+L +I+ S +LR
Sbjct: 564 -LDLRF---SDVSVFQDFKGLTSLNLSSNQIS-SVPEWLR 598
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 161/333 (48%), Gaps = 42/333 (12%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
L+ L ++ +K N SD LS L NL L +S +++ D +++++ L++LT L
Sbjct: 114 LQPTTNLTTVYLKTTNI---SDYSFLSDLKNLTHLDLSNNQIAD--LSFIQDLKQLTSLG 168
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS---KIGSLKVLNLGFNEITDE 267
L + +S L L LN L + + +S + L+ L + E TD
Sbjct: 169 LASNKIV-----DISGLKDLT--KLNTLNLRSNAIDDYSVLLNLKELRQLTVSVREATD- 220
Query: 268 CLVHLKGLTNLESLNLD-SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
L L+ L +L L+L + I D + L L L L+L Q+ S + L L L
Sbjct: 221 -LAFLQDLKDLTHLDLSYNHWISDISV--LRNLPKLTHLDLGSNQI--SNIAVLLDLQQL 275
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
++LS ISD S+ L L L+ L++ A +I D +A L +L GLTHLD+ ++D
Sbjct: 276 THLSLSSNQISDVSV--LQTLQGLERLDVSANEIAD--IAILQNLQGLTHLDISSNEVSD 331
Query: 387 SGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRS 442
+ L++ L L + + D GLT L SL+VS+++++ + L+ L +L S
Sbjct: 332 --ISVLQDLTTLTQLNVSSNEIIDYSVLQGLTQLTSLDVSDNQMSE--ISDLQGLHSLTS 387
Query: 443 LTLESCKVTANDIKRLQSRDLPNL----VSFRP 471
L L +++ DI LQ DL L +S+ P
Sbjct: 388 LNLSYNQLS--DISVLQ--DLKQLATLNLSYNP 416
>gi|18378037|emb|CAD21749.1| hypothetical leucine-rich repeat protein 1, LRRP1 [Trypanosoma
brucei]
Length = 1394
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 210/506 (41%), Gaps = 83/506 (16%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC 91
AL +L L G+N W + Q L L + +TD + H +C NL +LD +FC
Sbjct: 556 ALNELNLSNCFGINAGWEAIEKLQ--QLHVAILPNTHITDRDISHFSNCKNLVTLDLSFC 613
Query: 92 IQISDGGLEHLRGLSNLTSLS-------------------FRRNNAITAQGMKAFAGLI- 131
++ D + LSN+T+L R + +G+ +I
Sbjct: 614 NKLLD-----VTTLSNITTLEDLNLDNCSNIRKGLSVLGELPRLCVLNIKGVHLKDSVIG 668
Query: 132 ------NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
+ VKL LE C + G + L L+ LE LN+ +C+ +T S M L L L+ L
Sbjct: 669 SLGNGNSFVKLSLENC-KGFGDVKPLSNLVTLEELNLHYCDKVT-SGMGTLGRLLQLRVL 726
Query: 186 QI--------------------------SCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTA 218
+ C K+T S IA L L++L N++ C
Sbjct: 727 DLGRTQVDNNSLENICTSSSPLVSLNLSHCKKITSISAIASLTALEEL---NIDNCCNVT 783
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTN 277
+ + L L L+ +++D+ S+ SL LNL F +ITD + L +T
Sbjct: 784 SGWNVFGTLHQLRVATLSNTRINDENVRHVSECKSLNTLNLAFCKDITD--VTALSKITM 841
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
LE LNLD C +G+ L L + L + + Q+G S + S L N +S+ S
Sbjct: 842 LEELNLDCCPNIRKGIETLGTLPKARILSMKECQIGDSDAQQCSILGNSKSLVKLNLERS 901
Query: 338 DG--SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF 395
G S++ L+ +++L+ L LD Q + + S + L HL + + TD +N
Sbjct: 902 RGRISVKALSNIATLEELVLDHAQ----EVCCIPSFSCLPHLRVLNVKYTDINGDVTKNI 957
Query: 396 KNLRSLEICG----GGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 447
+SL + +TD + L+ L LNV G L L LR L
Sbjct: 958 SESKSLRLLNLSHCKWVTDISVLSSLSTLEKLNVKCCNGIRKGWESLGKLPLLRVAILSD 1017
Query: 448 CKVTANDIKRLQS-RDLPNLVSFRPE 472
+TA DI L S + L L FR E
Sbjct: 1018 TNITAKDIACLSSCKTLVKLKFFRCE 1043
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 174/388 (44%), Gaps = 44/388 (11%)
Query: 94 ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG 153
I + HL + L L+ +T ++ + L NL+ LDL + +
Sbjct: 189 IDNNDARHLFNIGTLEKLAITDTMQLT--NIRGISRLTNLMCLDLNSTNIDDSCVRRICA 246
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLE 212
+KL L++ CN ITD+ P+S L L+ L + SC +T GI L L +L +L+L
Sbjct: 247 CVKLSKLSVSECNNITDA--TPISQLEALEELNLNSCYHIT-KGIGTLGMLLRLRILDLS 303
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRC-QLSD---------------DGCEKFSK------ 250
G PV CL L GSL LN++ C QL D +GC + ++
Sbjct: 304 GVPVEDNCLKGLCDCGSLERLNISYCIQLKDINPLSNATATEELNLNGCRRITRGIGVVW 363
Query: 251 -IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELS 308
+ L+VL++ +++ L + L ++LD+C G GD L L+ + L+ L +
Sbjct: 364 ALPKLRVLHMKDVHLSEPSLDSVGTGGPLVKVSLDNCAGFGDMTL--LSSIVTLEELNIQ 421
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD-TGLAA 367
SG+ L L L +N+ IS + SL LN+++ IT + + A
Sbjct: 422 KCADIISGVGCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNMES--ITGLSNVEA 479
Query: 368 LTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL------VSLNV 421
L ++ L L L G D+G L N L+ L++ G + L L VSLN+
Sbjct: 480 LANILTLEKLSLHGCTDIDAGIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTMVSLNL 539
Query: 422 SNS-RITSAGLRHLKPLKNLRSLTLESC 448
S+ ++T+ H+ L+ L L L +C
Sbjct: 540 SHCWKMTNVS--HISSLEALNELNLSNC 565
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 158/367 (43%), Gaps = 40/367 (10%)
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+ + L L KL+++ C I G +L G + L + I IT D+ LS L
Sbjct: 977 ISVLSSLSTLEKLNVKCCNGIRKGWESL-GKLPLLRVAILSDTNITAKDIACLSSCKTLV 1035
Query: 184 SLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L+ C K++D + Y +Q L L + C L++L L L +L+L + SD
Sbjct: 1036 KLKFFRCEKLSDVTVVY--KIQSLEELMVRSCSDGLKGLNALGTLPRLRFLHLRNLKGSD 1093
Query: 243 DGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
E SL LN+ E+T+ L +T+LE L+L CG EG+ L L
Sbjct: 1094 ISVESIGTSKSLVRLNIEMREELTNA--TPLSNITSLEELSLRDCGDNLEGVGTLGKLPR 1151
Query: 302 LKCLELSDTQVGS-----------------------SGLRHLSGLTNLESINLSFTGISD 338
LK L+L +++ + + H+S LT LE +NLS +
Sbjct: 1152 LKSLDLGLSRISDDTLDDICLSRSITSLNLASSWKLTDISHISNLTALEEMNLSGCYPIN 1211
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTS-LTGLTHLDLFGARITDSGAAYLRNFKN 397
+ L+ L L+ +NL++ +T S L L++ + +TD A+Y+ N K
Sbjct: 1212 SGWKALSELPRLRVVNLESASVTTRYDGYYISRCKYLVTLNIQLSDMTD--ASYIANIKT 1269
Query: 398 LRSLEICGGGLTDAGLTGLVS------LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
L L I G + L + L++ SRIT LR ++P + L L C+
Sbjct: 1270 LEELRIGKSKELTQGFSALFTLPRLRILDLFMSRITDEDLREIQPPHTIEELNLSYCE-E 1328
Query: 452 ANDIKRL 458
NDI L
Sbjct: 1329 LNDITPL 1335
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 183/423 (43%), Gaps = 42/423 (9%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ ++L+ +DL+ +++ DS + + C L L + C I+D + L L L+
Sbjct: 221 SRLTNLMCLDLNSTNIDDSCVRRICACVKLSKLSVSECNNITDAT--PISQLEALEELNL 278
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
IT +G+ L+ L LDL L L LE LNI +C I D+
Sbjct: 279 NSCYHIT-KGIGTLGMLLRLRILDLSGVPVEDNCLKGLCDCGSLERLNISYC--IQLKDI 335
Query: 174 KPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
PLS T + L ++ C ++T GI + L KL +L+++ ++ LDS+ G L
Sbjct: 336 NPLSNATATEELNLNGCRRIT-RGIGVVWALPKLRVLHMKDVHLSEPSLDSVGTGGPLVK 394
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
++L+ C GF ++T L + LE LN+ C G
Sbjct: 395 VSLDNCA--------------------GFGDMT-----LLSSIVTLEELNIQKCADIISG 429
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAGLSSLK 351
+ L L L+ L + + + S + +L +N+ S TG+S+ + LA + +L+
Sbjct: 430 VGCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNMESITGLSN--VEALANILTLE 487
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG-GGLTD 410
L+L D G+ L +L L LDL G + L + + SL + +T+
Sbjct: 488 KLSLHGCTDIDAGIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTMVSLNLSHCWKMTN 547
Query: 411 ----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
+ L L LN+SN +AG ++ L+ L L + +T DI + NL
Sbjct: 548 VSHISSLEALNELNLSNCFGINAGWEAIEKLQQLHVAILPNTHITDRDISHFS--NCKNL 605
Query: 467 VSF 469
V+
Sbjct: 606 VTL 608
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 130/529 (24%), Positives = 202/529 (38%), Gaps = 141/529 (26%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISD----------------GGLEHLRGL 105
+DLSG V D+ L L DC +L+ L+ ++CIQ+ D G RG+
Sbjct: 300 LDLSGVPVEDNCLKGLCDCGSLERLNISYCIQLKDINPLSNATATEELNLNGCRRITRGI 359
Query: 106 SNLTSLSFRR----------------------------NNAITAQGMKAFAGLINLVKLD 137
+ +L R +N M + ++ L +L+
Sbjct: 360 GVVWALPKLRVLHMKDVHLSEPSLDSVGTGGPLVKVSLDNCAGFGDMTLLSSIVTLEELN 419
Query: 138 LERCTRIHGGLVNLKGLMKLESLNIKWCNC-------------ITDSDMKPLSGLTNLKS 184
+++C I G+ L L L LNIK + + +M+ ++GL+N+++
Sbjct: 420 IQKCADIISGVGCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNMESITGLSNVEA 479
Query: 185 LQ--ISCSKVT-------DSGIAYLKGLQKLTLLNLEGCPVTAACLDSL----------- 224
L ++ K++ D+GI L L +L +L+L G L SL
Sbjct: 480 LANILTLEKLSLHGCTDIDAGIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTMVSLNL 539
Query: 225 ------------SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
S+L +L LNL+ C + G E K+ L V L ITD + H
Sbjct: 540 SHCWKMTNVSHISSLEALNELNLSNCFGINAGWEAIEKLQQLHVAILPNTHITDRDISHF 599
Query: 273 KGLTNLESL-----------------------NLDSCGIGDEGLV---NLTGLC--NLKC 304
NL +L NLD+C +GL L LC N+K
Sbjct: 600 SNCKNLVTLDLSFCNKLLDVTTLSNITTLEDLNLDNCSNIRKGLSVLGELPRLCVLNIKG 659
Query: 305 LELSDTQVGSSG------------------LRHLSGLTNLESINLSFTGISDGSLRKLAG 346
+ L D+ +GS G ++ LS L LE +NL + + L
Sbjct: 660 VHLKDSVIGSLGNGNSFVKLSLENCKGFGDVKPLSNLVTLEELNLHYCDKVTSGMGTLGR 719
Query: 347 LSSLKSLNLDARQITDTGLAAL-TSLTGLTHLDL-FGARITD-SGAAYLRNFKNLRSLEI 403
L L+ L+L Q+ + L + TS + L L+L +IT S A L + L
Sbjct: 720 LLQLRVLDLGRTQVDNNSLENICTSSSPLVSLNLSHCKKITSISAIASLTALEELNIDNC 779
Query: 404 C---GGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
C G L L +SN+RI +RH+ K+L +L L CK
Sbjct: 780 CNVTSGWNVFGTLHQLRVATLSNTRINDENVRHVSECKSLNTLNLAFCK 828
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 137/319 (42%), Gaps = 37/319 (11%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISD-------------------GGLEHLRG 104
LS +++T + L C L L F C ++SD GL+ L
Sbjct: 1015 LSDTNITAKDIACLSSCKTLVKLKFFRCEKLSDVTVVYKIQSLEELMVRSCSDGLKGLNA 1074
Query: 105 LSNLTSLSFR--RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
L L L F RN + +++ +LV+L++E + L + LE L++
Sbjct: 1075 LGTLPRLRFLHLRNLKGSDISVESIGTSKSLVRLNIEMREELTNA-TPLSNITSLEELSL 1133
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
+ C + + L L LKSL + S+++D + + + +T LNL +
Sbjct: 1134 RDCGDNLEG-VGTLGKLPRLKSLDLGLSRISDDTLDDICLSRSITSLNL-ASSWKLTDIS 1191
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTNLESL 281
+S L +L +NL+ C + G + S++ L+V+NL +T ++ L +L
Sbjct: 1192 HISNLTALEEMNLSGCYPINSGWKALSELPRLRVVNLESASVTTRYDGYYISRCKYLVTL 1251
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSS-----GLRHLSGLTNLESINLSFTGI 336
N+ + D + N+K LE + ++G S G L L L ++L + I
Sbjct: 1252 NIQLSDMTDASYI-----ANIKTLE--ELRIGKSKELTQGFSALFTLPRLRILDLFMSRI 1304
Query: 337 SDGSLRKLAGLSSLKSLNL 355
+D LR++ +++ LNL
Sbjct: 1305 TDEDLREIQPPHTIEELNL 1323
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 118/271 (43%), Gaps = 44/271 (16%)
Query: 83 LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT 142
L+SLD +ISD L+ + ++TSL+ + +T + + L L +++L C
Sbjct: 1152 LKSLDLGLS-RISDDTLDDICLSRSITSLNLASSWKLT--DISHISNLTALEEMNLSGCY 1208
Query: 143 RIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD-SGIAYLK 201
I+ G L L +L +N++ + T D +S L +L I S +TD S IA +K
Sbjct: 1209 PINSGWKALSELPRLRVVNLESASVTTRYDGYYISRCKYLVTLNIQLSDMTDASYIANIK 1268
Query: 202 GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF 261
L++L + + +LF L L++L+L
Sbjct: 1269 TLEELRI---------GKSKELTQGFSALFTL------------------PRLRILDLFM 1301
Query: 262 NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL------ELSDTQVGSS 315
+ ITDE L ++ +E LNL C E L ++T L +K + + D + +
Sbjct: 1302 SRITDEDLREIQPPHTIEELNLSYC----EELNDITPLGRIKSIKKLHLRQRHDVRRPTE 1357
Query: 316 GLRHLSGLTNLESINL-SFTGISDGS--LRK 343
G R L L L ++L + G SD S LRK
Sbjct: 1358 GFRSLLELPCLSWVDLDNVYGWSDVSCELRK 1388
>gi|290984372|ref|XP_002674901.1| predicted protein [Naegleria gruberi]
gi|284088494|gb|EFC42157.1| predicted protein [Naegleria gruberi]
Length = 599
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 195/425 (45%), Gaps = 42/425 (9%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L S+++ + + G H+ L LD N + I + G+E + + LT L
Sbjct: 167 SKLKELTSLEIGDNHLKSEGAAHIAQMRKLTFLDINTNM-IGNEGIELISRMEQLTDLDV 225
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
NN I ++G+K+ + +L L++ G + L + +L++L I CN I
Sbjct: 226 MDNN-IRSEGVKSLCKMKHLTNLNIGNNPIEDEGAILLGEMKQLKNL-ITACNNIGMKGF 283
Query: 174 KPLSGLTNLKSLQISC--SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
LS L NL+SL I K TD +++ + +LT L G + D +S L +L
Sbjct: 284 SSLSTLLNLESLVILGLDGKSTD----FIREMNQLTRLEFYGSNLEPKGFDPISHLSNLT 339
Query: 232 YLNLNRCQLSDDGCE---KFSKIGSLKV--------------------LNLGFNEITD-E 267
+L + ++D E +F K+ +L V L+L +N+I E
Sbjct: 340 FLTIRGRNIADGDLECIGQFKKLTTLNVPSCNINQGFKSICGLKNLTFLDLSYNKIESVE 399
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
+ +LK LT L+ ++ IG EG +++ L NL L++ + G+++LS + L
Sbjct: 400 SITNLKSLTQLD---INGNRIGHEGAKSISQLDNLTNLQIGHNLIQDEGIKYLSTMQCLT 456
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDS 387
++ ++ IS + ++ L SL+L I G L+ L LT L ++G RI D
Sbjct: 457 TLGVAENQISIEGAKFISKSHQLTSLDLTNNVIETEGAKILSELNNLTGLFVYGNRIRDE 516
Query: 388 GAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLR 441
GA Y+ + L L+I +TD G L L +L + ++ I G + + +K L
Sbjct: 517 GAKYISTMQQLTILDIAYNEITDEGAKAISNLDQLSTLYIYSNEICDEGAKSICGMKQLT 576
Query: 442 SLTLE 446
L ++
Sbjct: 577 ILDID 581
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 127/274 (46%), Gaps = 12/274 (4%)
Query: 185 LQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
L+IS ++ + ++ +++LT L++ + ++S L L LN+ + ++ +G
Sbjct: 103 LEISYCRLEAEDVNFIGEMKQLTELDISLNNINCKGAITISQLSKLTKLNVYQTKMGVEG 162
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
++ SK+ L L +G N + E H+ + L L++++ IG+EG+ ++ + L
Sbjct: 163 AKELSKLKELTSLEIGDNHLKSEGAAHIAQMRKLTFLDINTNMIGNEGIELISRMEQLTD 222
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 364
L++ D + S G++ L + +L ++N+ I D L + LK+L I G
Sbjct: 223 LDVMDNNIRSEGVKSLCKMKHLTNLNIGNNPIEDEGAILLGEMKQLKNLITACNNIGMKG 282
Query: 365 LAALTSLTGLTHLDLFG--ARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGL 416
++L++L L L + G + TD ++R L LE G L G L+ L
Sbjct: 283 FSSLSTLLNLESLVILGLDGKSTD----FIREMNQLTRLEFYGSNLEPKGFDPISHLSNL 338
Query: 417 VSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
L + I L + K L +L + SC +
Sbjct: 339 TFLTIRGRNIADGDLECIGQFKKLTTLNVPSCNI 372
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 132/294 (44%), Gaps = 41/294 (13%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
G++ K D I + + L ++ GS++ G + SNL L I+DG LE +
Sbjct: 299 GLDGKSTDFI-REMNQLTRLEFYGSNLEPKGFDPISHLSNLTFLTIR-GRNIADGDLECI 356
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG--GLVNLKGLMKLESL 160
LT+L+ N QG K+ GL NL LDL +I + NLK L +L+ +
Sbjct: 357 GQFKKLTTLNVPSCN--INQGFKSICGLKNLTFLDLSY-NKIESVESITNLKSLTQLD-I 412
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL-------NLEG 213
N N I K +S L NL +LQI + + D GI YL +Q LT L ++EG
Sbjct: 413 N---GNRIGHEGAKSISQLDNLTNLQIGHNLIQDEGIKYLSTMQCLTTLGVAENQISIEG 469
Query: 214 CPVT--------------------AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGS 253
A L L+ L LF NR + D+G + S +
Sbjct: 470 AKFISKSHQLTSLDLTNNVIETEGAKILSELNNLTGLFVYG-NR--IRDEGAKYISTMQQ 526
Query: 254 LKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL 307
L +L++ +NEITDE + L L +L + S I DEG ++ G+ L L++
Sbjct: 527 LTILDIAYNEITDEGAKAISNLDQLSTLYIYSNEICDEGAKSICGMKQLTILDI 580
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 27/216 (12%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
SL +D++G+ + G + NL +L + I D G+++L + LT+L N
Sbjct: 406 SLTQLDINGNRIGHEGAKSISQLDNLTNLQIGHNL-IQDEGIKYLSTMQCLTTLGVAEN- 463
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS 177
I+ +G K + L LDL N I K LS
Sbjct: 464 QISIEGAKFISKSHQLTSLDLTN-------------------------NVIETEGAKILS 498
Query: 178 GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
L NL L + +++ D G Y+ +Q+LT+L++ +T ++S L L L +
Sbjct: 499 ELNNLTGLFVYGNRIRDEGAKYISTMQQLTILDIAYNEITDEGAKAISNLDQLSTLYIYS 558
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
++ D+G + + L +L++ +N +++E L+
Sbjct: 559 NEICDEGAKSICGMKQLTILDIDYNVLSEEVSNQLR 594
>gi|290994542|ref|XP_002679891.1| predicted protein [Naegleria gruberi]
gi|284093509|gb|EFC47147.1| predicted protein [Naegleria gruberi]
Length = 359
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 139/295 (47%), Gaps = 1/295 (0%)
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
+ A+G + L +L LD+ + G ++ + +L LNI N I K +
Sbjct: 51 VNAEGANMISNLAHLADLDISNNQLLERGSKIIREMTQLTKLNISRNN-INAGGTKSICE 109
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+T L L IS + + + G +Y+ G+ KLT L++ + + SL + +L LN++ C
Sbjct: 110 MTQLTDLDISNNFIGNEGASYIGGMTKLTNLSISENHIGVEGIKSLFHINNLICLNISSC 169
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
++ D+G S++ L L + NEI + + L LN+ +G+EG +
Sbjct: 170 KIGDEGARLISEMKQLTTLEISHNEIGSYGSKAISEMYQLTKLNIRYNVLGNEGAHYIGI 229
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
+ L L++S ++ G + LS L+ L ++++ I D ++ ++ L L L++
Sbjct: 230 MEQLTELDISHNRISGEGAKSLSKLSQLTKLDINTNEIGDEGMKSISKLDQLLYLDIGEN 289
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL 413
+I D G + ++ LT L + R+ + GA L L L+IC + D L
Sbjct: 290 EIGDIGTGLIIGMSKLTELLINDNRVGNDGAESLAQMHQLTQLDICNNPVNDDSL 344
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 142/301 (47%), Gaps = 10/301 (3%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
+S L +L L IS +++ + G ++ + +LT LN+ + A S+ + L L++
Sbjct: 59 ISNLAHLADLDISNNQLLERGSKIIREMTQLTKLNISRNNINAGGTKSICEMTQLTDLDI 118
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
+ + ++G + L L++ N I E + L + NL LN+ SC IGDEG
Sbjct: 119 SNNFIGNEGASYIGGMTKLTNLSISENHIGVEGIKSLFHINNLICLNISSCKIGDEGARL 178
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
++ + L LE+S ++GS G + +S + L +N+ + + + + + L L++
Sbjct: 179 ISEMKQLTTLEISHNEIGSYGSKAISEMYQLTKLNIRYNVLGNEGAHYIGIMEQLTELDI 238
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI-------CGGGL 408
+I+ G +L+ L+ LT LD+ I D G + L L+I G GL
Sbjct: 239 SHNRISGEGAKSLSKLSQLTKLDINTNEIGDEGMKSISKLDQLLYLDIGENEIGDIGTGL 298
Query: 409 TDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVS 468
G++ L L ++++R+ + G L + L L + C ND LP+L++
Sbjct: 299 I-IGMSKLTELLINDNRVGNDGAESLAQMHQLTQLDI--CNNPVNDDSLELLSKLPDLIN 355
Query: 469 F 469
F
Sbjct: 356 F 356
>gi|326679785|ref|XP_002660968.2| PREDICTED: hypothetical protein LOC100332407 [Danio rerio]
Length = 537
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 204/450 (45%), Gaps = 57/450 (12%)
Query: 5 DISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIAS----QGSSLL 60
++++ + + + R L +LE F C LQ L YP ++ + + + + S L
Sbjct: 111 ELAELLLSHMARERLLRPRTLELFFGCPLQKFVLNCYPYTTNELLRQLRAFTCLKHLSFL 170
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
+ L +TD+GL L + S LQ L+ + C +++D L+H+ GL +LT L+ +
Sbjct: 171 NSPL----ITDAGLSVLSNLSKLQHLNLSSCSKLTDSCLQHITGLRSLTFLALDQTKV-- 224
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCN------CITDSDMK 174
+ AGL L+ L+S + C IT+S ++
Sbjct: 225 -----SDAGL-----------------------LLYLQSGSSALCQLSLNQTAITESTLR 256
Query: 175 PLSG-LTNLKSLQISCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
L + L+ L I +KV+D S +A LK LQ L+L+G V L L++ SL
Sbjct: 257 VLPASVPQLRMLSIKHTKVSDVSALAELKNLQT---LHLDGTGVQENSLQCLASHPSLSA 313
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNL---GFNEITDECLVHL-KGLTNLESLNLDSCGI 288
L+L ++ DG I L++ L G + +TD L L + LE D +
Sbjct: 314 LSLAGIPVA-DGNHTLEIIAGLRLTQLTLPGRHSVTDSGLSFLSRQTLLLELDLTDYTQL 372
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI-SDGSLRKLAGL 347
D G+ L+ + LK L LS+TQV SGL+ L L L+ + L T + S G + L
Sbjct: 373 TDHGITQLSSMTRLKKLSLSNTQVSDSGLQGLIRLKELQELCLDRTAVTSRGVAALITHL 432
Query: 348 SSLKSLNLDARQITDTGL-AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG 406
L+ + L + Q+ DT + L L L+L RITD G +L + L + + G
Sbjct: 433 PHLQVMGLASTQVGDTVIRRGLVHCPQLLKLNLSRTRITDQGLKFLCRMQ-LSQVNLDGT 491
Query: 407 GLTDAGLTGLVSLNVSNSRITSAGLRHLKP 436
G+T G+ L+S S + ++ R + P
Sbjct: 492 GVTLVGIANLISACPHLSSVRASHTRAIPP 521
>gi|254411888|ref|ZP_05025664.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196181610|gb|EDX76598.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 415
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 162/312 (51%), Gaps = 44/312 (14%)
Query: 171 SDMKPLSGLTNLKSLQISCSKVTD--------------------SGIAYLKGLQKLTLLN 210
SD+ PLS LTNL+SL + +++TD + I L L LT L+
Sbjct: 86 SDLSPLSELTNLESLHLDGNQITDICPLTELTNLKYLTLRRNQITDICPLTELTNLTELS 145
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
LEG + A ++SL+ L +L +LNL Q++ +++ +LK L+L N+ITD +
Sbjct: 146 LEGNQI--ADVNSLAELTNLEFLNLENNQIT--TISPLAELQNLKRLHLEDNQITD--IS 199
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
L GL NL L+L+ I D + L+ NLK L L Q+ + LS LTNL+++
Sbjct: 200 SLAGLQNLTWLHLEDNQITD--ISPLSEFTNLKGLFLVLNQI--KDISPLSQLTNLKALE 255
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
L F I D + LA L +L L+L+ QITD ++ L+ LT LT L L +I D +
Sbjct: 256 LKFNQIQD--ISPLAELQNLTWLDLEDNQITD--ISPLSGLTNLTFLSLTYNQIQD--VS 309
Query: 391 YLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
L NL+ L++ + D A LT L +L+++ ++IT L L+NL +L+L
Sbjct: 310 PLSGLTNLKRLQLNFNQIQDISPLAELTNLETLSLNGNQITDVS--PLSGLQNLNALSLN 367
Query: 447 SCKVTANDIKRL 458
++T DI L
Sbjct: 368 GNQIT--DISPL 377
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 202/391 (51%), Gaps = 60/391 (15%)
Query: 11 FNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVT 70
F EL ++ ++S+EA R L L + G ND ++ A SS + L+ +++
Sbjct: 35 FKELCQNQA--DLSVEAGRTV---QLLLAEV-GTND--CELAAENLSSRTELSLNRQEIS 86
Query: 71 DSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGL 130
D L L + +NL+SL + QI+D + L L+NL L+ RRN IT + L
Sbjct: 87 D--LSPLSELTNLESLHLDGN-QITD--ICPLTELTNLKYLTLRRN-QIT--DICPLTEL 138
Query: 131 INLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCS 190
NL +L LE +I + +L L LE LN++ N IT + PL+ L NLK L + +
Sbjct: 139 TNLTELSLE-GNQI-ADVNSLAELTNLEFLNLE-NNQITT--ISPLAELQNLKRLHLEDN 193
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVT-AACLDSLSALGSLFYLNLNRCQLSDDGCEKFS 249
++TD I+ L GLQ LT L+LE +T + L + L LF + LN+ + S
Sbjct: 194 QITD--ISSLAGLQNLTWLHLEDNQITDISPLSEFTNLKGLFLV-LNQIK----DISPLS 246
Query: 250 KIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD----EGLVNLT-------- 297
++ +LK L L FN+I D + L L NL L+L+ I D GL NLT
Sbjct: 247 QLTNLKALELKFNQIQD--ISPLAELQNLTWLDLEDNQITDISPLSGLTNLTFLSLTYNQ 304
Query: 298 --------GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 349
GL NLK L+L+ Q+ + L+ LTNLE+++L+ I+D S L+GL +
Sbjct: 305 IQDVSPLSGLTNLKRLQLNFNQI--QDISPLAELTNLETLSLNGNQITDVS--PLSGLQN 360
Query: 350 LKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
L +L+L+ QITD ++ L+GLT+L +
Sbjct: 361 LNALSLNGNQITD-----ISPLSGLTNLKVL 386
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 137/282 (48%), Gaps = 49/282 (17%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L + L G+ + D L + +NL+ L+ QI+ + L L NL L +
Sbjct: 139 TNLTELSLEGNQIADVN--SLAELTNLEFLNLENN-QIT--TISPLAELQNLKRLHLE-D 192
Query: 117 NAITAQGMKAFAGLINLVKLDLE--RCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSD 172
N IT + + AGL NL L LE + T I NLKGL + N I D
Sbjct: 193 NQIT--DISSLAGLQNLTWLHLEDNQITDISPLSEFTNLKGLFLV-------LNQI--KD 241
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
+ PLS LTNLK+L++ +++ D I+ L LQ LT L+LE +T + LS L +L +
Sbjct: 242 ISPLSQLTNLKALELKFNQIQD--ISPLAELQNLTWLDLEDNQITD--ISPLSGLTNLTF 297
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD-- 290
L+L Q+ D S + +LK L L FN+I D + L LTNLE+L+L+ I D
Sbjct: 298 LSLTYNQIQD--VSPLSGLTNLKRLQLNFNQIQD--ISPLAELTNLETLSLNGNQITDVS 353
Query: 291 --EGLVNL----------------TGLCNLKCLELSDTQVGS 314
GL NL +GL NLK L L++ + S
Sbjct: 354 PLSGLQNLNALSLNGNQITDISPLSGLTNLKVLHLTENPIFS 395
>gi|149175637|ref|ZP_01854257.1| putative serine/threonine-protein kinase [Planctomyces maris DSM
8797]
gi|148845622|gb|EDL59965.1| putative serine/threonine-protein kinase [Planctomyces maris DSM
8797]
Length = 718
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 228 GSLFYLNLNRCQLSDDG-CEKFSKIGSLKVLNLGFNEI-------TDECLVHLKGLTNLE 279
+++ LN ++C++ DG E +++ L V++ EI T E + LKGL LE
Sbjct: 510 AAVWLLN-HQCEIIIDGRYEPVTQVQELPVVDFYIREIKFHPQTITREVMAPLKGLAKLE 568
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT-GISD 338
+L+L+ C + D+ L L G LK L+L +T + ++GL H+S L NL ++L I+D
Sbjct: 569 TLHLEDCHVMDDALAPLEGKLTLKTLDLHETGLTNAGLSHISSLLNLTHLSLQKNREITD 628
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 398
L+ LA L L S+NLD ITD G+ + L L++ +I+D+ L +
Sbjct: 629 EGLQALANLKKLSSINLDRLNITDEGITFIKHNPRLDWLNIKDTQISDTSIPLLIKLNRM 688
Query: 399 RSLEICGGGLTDAGLTGL 416
++L + G +TD G+ +
Sbjct: 689 KNLYLEGSKITDQGIQKI 706
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 165 CNCITDSDMKPLSGLTNL-------KSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
C I D +P++ + L + ++ +T +A LKGL KL L+LE C V
Sbjct: 519 CEIIIDGRYEPVTQVQELPVVDFYIREIKFHPQTITREVMAPLKGLAKLETLHLEDCHVM 578
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN-EITDECLVHLKGLT 276
L L +L L+L+ L++ G S + +L L+L N EITDE L L L
Sbjct: 579 DDALAPLEGKLTLKTLDLHETGLTNAGLSHISSLLNLTHLSLQKNREITDEGLQALANLK 638
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
L S+NLD I DEG+ + L L + DTQ+ + + L L ++++ L + I
Sbjct: 639 KLSSINLDRLNITDEGITFIKHNPRLDWLNIKDTQISDTSIPLLIKLNRMKNLYLEGSKI 698
Query: 337 SDGSLRKL----AGLSSLK 351
+D ++K+ AG +K
Sbjct: 699 TDQGIQKIKNAYAGRDPIK 717
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 2/146 (1%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+ L ++ L V D L L+ L++LD + +++ GL H+ L NLT LS ++N
Sbjct: 565 AKLETLHLEDCHVMDDALAPLEGKLTLKTLDLHET-GLTNAGLSHISSLLNLTHLSLQKN 623
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
IT +G++A A L L ++L+R G+ +K +L+ LNIK I+D+ + L
Sbjct: 624 REITDEGLQALANLKKLSSINLDRLNITDEGITFIKHNPRLDWLNIK-DTQISDTSIPLL 682
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKG 202
L +K+L + SK+TD GI +K
Sbjct: 683 IKLNRMKNLYLEGSKITDQGIQKIKN 708
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 8/191 (4%)
Query: 91 CIQISDGGLEHLRGLSNLTSLSFR------RNNAITAQGMKAFAGLINLVKLDLERCTRI 144
C I DG E + + L + F IT + M GL L L LE C +
Sbjct: 519 CEIIIDGRYEPVTQVQELPVVDFYIREIKFHPQTITREVMAPLKGLAKLETLHLEDCHVM 578
Query: 145 HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK-VTDSGIAYLKGL 203
L L+G + L++L++ +T++ + +S L NL L + ++ +TD G+ L L
Sbjct: 579 DDALAPLEGKLTLKTLDLHETG-LTNAGLSHISSLLNLTHLSLQKNREITDEGLQALANL 637
Query: 204 QKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNE 263
+KL+ +NL+ +T + + L +LN+ Q+SD K+ +K L L ++
Sbjct: 638 KKLSSINLDRLNITDEGITFIKHNPRLDWLNIKDTQISDTSIPLLIKLNRMKNLYLEGSK 697
Query: 264 ITDECLVHLKG 274
ITD+ + +K
Sbjct: 698 ITDQGIQKIKN 708
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQI-------TDTGLAALTSLTGLTHLDLFGARITDSG 388
I DG + + L ++ R+I T +A L L L L L + D
Sbjct: 522 IIDGRYEPVTQVQELPVVDFYIREIKFHPQTITREVMAPLKGLAKLETLHLEDCHVMDDA 581
Query: 389 AAYLRNFKNLRSLEICGGGLTDAGLTGLVS-LNVS------NSRITSAGLRHLKPLKNLR 441
A L L++L++ GLT+AGL+ + S LN++ N IT GL+ L LK L
Sbjct: 582 LAPLEGKLTLKTLDLHETGLTNAGLSHISSLLNLTHLSLQKNREITDEGLQALANLKKLS 641
Query: 442 SLTLESCKVT 451
S+ L+ +T
Sbjct: 642 SINLDRLNIT 651
>gi|168701211|ref|ZP_02733488.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 702
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 194/459 (42%), Gaps = 102/459 (22%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
L S+ L + VTD+G+ HL L++LD + ++++D GL+ L GL NL +L+
Sbjct: 218 PKLKSLRLERTQVTDAGMKHLAAVEGLEALDLSR-LRVTDAGLKELAGLKNLRALTLLFT 276
Query: 117 NAITAQGMKAF--AGLINL------VK----LDLERCTRIHG----------GLVNLKGL 154
+T G++ F AGL +L VK D+ C + + L GL
Sbjct: 277 Q-VTGAGLRPFAGAGLTHLALSGSKVKAADVADVVACRALAALAVEGRWPADAVAQLAGL 335
Query: 155 MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLK------------- 201
+L SL+ + + + + LSG + L+++ ++ VTD +A L+
Sbjct: 336 PELRSLHFQ-SDLLDGKVLAELSGASKLEAVHLAT--VTDDALAGLRRAGKLHTIPQARA 392
Query: 202 ------GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 255
G ++ L+L G PVT A L L+ +L L L +++ G + + L
Sbjct: 393 ERGRPAGPDEVVHLDLSGQPVTGAGLKELTVFRNLDTLVLRNTRVA-GGIGALADLRKLS 451
Query: 256 VLNLGF-----NEITDECLVHLKGLTNLESLNLD-------------------------- 284
L L +T + L L LE L+L
Sbjct: 452 ALTLPLYGGDDRAVTPAEMRRLAALDTLEELHLHGVLVPGMARAVASIPNLTTLSGTFQD 511
Query: 285 ------------------SCGIGDEGLVNLTGLCNLKCLELSDT-QVGSSGLRHLSGLTN 325
GI DEG ++ + L+C+ LSDT ++ +G R L+ L N
Sbjct: 512 TDLREFPALKHLRALMTGGAGITDEGAWDVARMKRLECVSLSDTRRLTDAGARDLAALPN 571
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L+ + LS TG++D ++ LAG+ +L++L L ++ G+AAL GL LDL GA
Sbjct: 572 LKHLCLSRTGVTDEGVQVLAGVKTLRTLWLSEIKVGPAGVAALGRHPGLVALDLSGAPRG 631
Query: 386 DSGAAYLRNFKNLRSLEICG---GGLTDAGLTGLVSLNV 421
+ A L L L + G G T A L L L V
Sbjct: 632 E--AEPLAGITTLEYLNLAGALTGERTLAALAKLPHLRV 668
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 178/410 (43%), Gaps = 47/410 (11%)
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC 141
L LD +F ++ D L+ L L SL R +T GMK A + L LDL R
Sbjct: 195 GLTHLDLSFS-RVGDDDLKLLAAFPKLKSLRLERTQ-VTDAGMKHLAAVEGLEALDLSRL 252
Query: 142 TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLK 201
GL L GL L +L + + +T + ++P +G L L +S SKV + +A +
Sbjct: 253 RVTDAGLKELAGLKNLRALTLLFTQ-VTGAGLRPFAG-AGLTHLALSGSKVKAADVADVV 310
Query: 202 GLQKLTLLNLEG-CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG 260
+ L L +EG P A L+ L L L+ L + S L+ ++L
Sbjct: 311 ACRALAALAVEGRWPADAVA--QLAGLPELRSLHFQSDLLDGKVLAELSGASKLEAVHLA 368
Query: 261 FNEITDECLVHLKGLTNL-----------------ESLNLDSCG--IGDEGLVNLTGLCN 301
+TD+ L L+ L E ++LD G + GL LT N
Sbjct: 369 --TVTDDALAGLRRAGKLHTIPQARAERGRPAGPDEVVHLDLSGQPVTGAGLKELTVFRN 426
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG-----ISDGSLRKLAGLSSLKSLNLD 356
L L L +T+V + G+ L+ L L ++ L G ++ +R+LA L +L+ L+L
Sbjct: 427 LDTLVLRNTRV-AGGIGALADLRKLSALTLPLYGGDDRAVTPAEMRRLAALDTLEELHLH 485
Query: 357 ARQITDTGLA-ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG 415
+ G+A A+ S+ LT L D+ K+LR+L G G+TD G
Sbjct: 486 G--VLVPGMARAVASIPNLTTLS---GTFQDTDLREFPALKHLRALMTGGAGITDEGAWD 540
Query: 416 LVSLN----VSNS---RITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
+ + VS S R+T AG R L L NL+ L L VT ++ L
Sbjct: 541 VARMKRLECVSLSDTRRLTDAGARDLAALPNLKHLCLSRTGVTDEGVQVL 590
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 30/263 (11%)
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L +L+L+ ++ DD + + LK L L ++TD + HL + LE+L+L +
Sbjct: 196 LTHLDLSFSRVGDDDLKLLAAFPKLKSLRLERTQVTDAGMKHLAAVEGLEALDLSRLRVT 255
Query: 290 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHL--SGLTN--LESINLSFTGISD------- 338
D GL L GL NL+ L L TQV +GLR +GLT+ L + ++D
Sbjct: 256 DAGLKELAGLKNLRALTLLFTQVTGAGLRPFAGAGLTHLALSGSKVKAADVADVVACRAL 315
Query: 339 -----------GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDS 387
++ +LAGL L+SL+ + + LA L+ + L + L A +TD
Sbjct: 316 AALAVEGRWPADAVAQLAGLPELRSLHFQSDLLDGKVLAELSGASKLEAVHL--ATVTDD 373
Query: 388 GAAYLRNFKNLRSLEICGGGL-TDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
A LR L ++ AG +V L++S +T AGL+ L +NL +L L
Sbjct: 374 ALAGLRRAGKLHTIPQARAERGRPAGPDEVVHLDLSGQPVTGAGLKELTVFRNLDTLVLR 433
Query: 447 SCKVTAN-----DIKRLQSRDLP 464
+ +V D+++L + LP
Sbjct: 434 NTRVAGGIGALADLRKLSALTLP 456
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 147/332 (44%), Gaps = 23/332 (6%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S S L +V L+ VTD L L+ L ++ + G + + L LS
Sbjct: 357 SGASKLEAVHLA--TVTDDALAGLRRAGKLHTIPQARAERGRPAGPDEVVHLD----LS- 409
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC----NCIT 169
+T G+K NL L L R TR+ GG+ L L KL +L + +T
Sbjct: 410 --GQPVTGAGLKELTVFRNLDTLVL-RNTRVAGGIGALADLRKLSALTLPLYGGDDRAVT 466
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAY-LKGLQKLTLLNLEGCPVTAACLDSLSALG 228
++M+ L+ L L+ L + V G+A + + LT L G L AL
Sbjct: 467 PAEMRRLAALDTLEELHLHGVLV--PGMARAVASIPNLT--TLSGT-FQDTDLREFPALK 521
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG-FNEITDECLVHLKGLTNLESLNLDSCG 287
L L ++D+G +++ L+ ++L +TD L L NL+ L L G
Sbjct: 522 HLRALMTGGAGITDEGAWDVARMKRLECVSLSDTRRLTDAGARDLAALPNLKHLCLSRTG 581
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
+ DEG+ L G+ L+ L LS+ +VG +G+ L L +++LS G G LAG+
Sbjct: 582 VTDEGVQVLAGVKTLRTLWLSEIKVGPAGVAALGRHPGLVALDLS--GAPRGEAEPLAGI 639
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
++L+ LNL + LAAL L L L L
Sbjct: 640 TTLEYLNLAGALTGERTLAALAKLPHLRVLHL 671
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 6/182 (3%)
Query: 247 KFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE 306
+ +KI ++ + L + T L L L L+L +GD+ L L LK L
Sbjct: 165 EIAKIDNVTYIGLSSSRDTGAKLRALAAAKGLTHLDLSFSRVGDDDLKLLAAFPKLKSLR 224
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA 366
L TQV +G++HL+ + LE+++LS ++D L++LAGL +L++L L Q+T GL
Sbjct: 225 LERTQVTDAGMKHLAAVEGLEALDLSRLRVTDAGLKELAGLKNLRALTLLFTQVTGAGLR 284
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD-----AGLTGLVSLNV 421
GLTHL L G+++ + A + + L +L + G D AGL L SL+
Sbjct: 285 PFAG-AGLTHLALSGSKVKAADVADVVACRALAALAVEGRWPADAVAQLAGLPELRSLHF 343
Query: 422 SN 423
+
Sbjct: 344 QS 345
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 11/153 (7%)
Query: 322 GLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG 381
GLT+L +LSF+ + D L+ LA LKSL L+ Q+TD G+ L ++ GL LDL
Sbjct: 195 GLTHL---DLSFSRVGDDDLKLLAAFPKLKSLRLERTQVTDAGMKHLAAVEGLEALDLSR 251
Query: 382 ARITDSGAAYLRNFKNLRSL-----EICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKP 436
R+TD+G L KNLR+L ++ G GL GL L +S S++ +A + +
Sbjct: 252 LRVTDAGLKELAGLKNLRALTLLFTQVTGAGLRPFAGAGLTHLALSGSKVKAADVADVVA 311
Query: 437 LKNLRSLTLESCKVTANDIKRLQSRDLPNLVSF 469
+ L +L +E + A+ + +L LP L S
Sbjct: 312 CRALAALAVEG-RWPADAVAQLAG--LPELRSL 341
>gi|149173736|ref|ZP_01852365.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148847266|gb|EDL61600.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 496
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 127/265 (47%), Gaps = 10/265 (3%)
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT-AACLDSLSALGSLFYLNL 235
GL + + + +++TD G+ YL L L LNL+ VT A L L L L L+L
Sbjct: 116 PGLRPVPAANVRRNQITDRGLGYLTELSSLRSLNLQATRVTDAGLLQYLPELPRLQRLSL 175
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT--NLESLNLDSCGIGDEGL 293
++D + L+ +NLG +++E +++L G +L LNL + + D+ L
Sbjct: 176 ACLDITDAALLALESLAWLESINLGHTAVSNEAILNLVGAKAFSLRRLNLSNTAVNDQAL 235
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
L LELSDT + + + L + L+FT I+D +R LA L+ L
Sbjct: 236 AECLPDSQLNKLELSDTGITDAACQSCVECEWLTDLCLNFTDITDDGVRHLANCGHLRKL 295
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL 413
L +ITDT L L +G+ L L ITD+G L +F L SL++ LTD GL
Sbjct: 296 ELFKTKITDTSLVWLAD-SGIEDLGLGFTAITDAGIPALTDFPALESLDLQKTSLTDKGL 354
Query: 414 ------TGLVSLNVSNSRITSAGLR 432
T L L + N+ I+ AG+
Sbjct: 355 RFLSEATNLKQLQLDNTEISHAGIE 379
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 145/343 (42%), Gaps = 65/343 (18%)
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+GL NL + S+V + + +L L L+ ++ A L+ + + +L L L
Sbjct: 30 NGLVNLMN-----SEVANEDLRHLIFYPGFEALILDNTSISDAGLNFIGEMRNLERLGLY 84
Query: 237 RCQLSDDGCEKFSK-------------------IGSLKVLNLGFNEITDECLVHLKGLTN 277
+SDDG + K + + N+ N+ITD L +L L++
Sbjct: 85 DTLVSDDGLKPLLKLSKLEKLNIACAPGCLSPGLRPVPAANVRRNQITDRGLGYLTELSS 144
Query: 278 LESLNLDSCGIGDEGLVN-LTGLCNLK-----CLELSD-------------------TQV 312
L SLNL + + D GL+ L L L+ CL+++D T V
Sbjct: 145 LRSLNLQATRVTDAGLLQYLPELPRLQRLSLACLDITDAALLALESLAWLESINLGHTAV 204
Query: 313 GSSGLRHLSGLT--NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
+ + +L G +L +NLS T ++D +L + S L L L ITD +
Sbjct: 205 SNEAILNLVGAKAFSLRRLNLSNTAVNDQALAECLPDSQLNKLELSDTGITDAACQSCVE 264
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL-----TGLVSLNVSNSR 425
LT L L ITD G +L N +LR LE+ +TD L +G+ L + +
Sbjct: 265 CEWLTDLCLNFTDITDDGVRHLANCGHLRKLELFKTKITDTSLVWLADSGIEDLGLGFTA 324
Query: 426 ITSAGLRHLKPLKNLRSLTLESCKVT---------ANDIKRLQ 459
IT AG+ L L SL L+ +T A ++K+LQ
Sbjct: 325 ITDAGIPALTDFPALESLDLQKTSLTDKGLRFLSEATNLKQLQ 367
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 154/357 (43%), Gaps = 48/357 (13%)
Query: 57 SSLLSVDLSGSDVTDSGLI-HLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
SSL S++L + VTD+GL+ +L + LQ L C+ I+D L L L+ L S++
Sbjct: 143 SSLRSLNLQATRVTDAGLLQYLPELPRLQRLSL-ACLDITDAALLALESLAWLESINLGH 201
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
TA +A L+ L R + VN + L + C+ DS
Sbjct: 202 ----TAVSNEAILNLVGAKAFSLRRLN-LSNTAVNDQALAE----------CLPDS---- 242
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L L++S + +TD+ + LT L L +T + L+ G L L L
Sbjct: 243 -----QLNKLELSDTGITDAACQSCVECEWLTDLCLNFTDITDDGVRHLANCGHLRKLEL 297
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
+ +++D + G ++ L LGF ITD + L LESL+L + D+GL
Sbjct: 298 FKTKITDTSLVWLADSG-IEDLGLGFTAITDAGIPALTDFPALESLDLQKTSLTDKGLRF 356
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L+ NLK L+L +T++ +G+ L L GI + L L +SL++L +
Sbjct: 357 LSEATNLKQLQLDNTEISHAGIEFLLSLP--LESLSLNPGIDNAGLNTLVRHNSLRNLAI 414
Query: 356 DARQITD-------------------TGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
+T+ T L+ L L L +L L+G R + + A LR
Sbjct: 415 WNCNVTNWQPLMKLELLEVLLIDDSVTDLSPLRELDQLKYLLLWGDRFSPTELARLR 471
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 16/189 (8%)
Query: 15 VYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGL 74
++ +T+ SL D ++DL LG + + D + + + +L S+DL + +TD GL
Sbjct: 297 LFKTKITDTSLVWLADSGIEDLGLG-FTAITDAGIPAL-TDFPALESLDLQKTSLTDKGL 354
Query: 75 IHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLV 134
L + +NL+ L + +IS G+E L +L S N I G+ +L
Sbjct: 355 RFLSEATNLKQLQLDN-TEISHAGIEF---LLSLPLESLSLNPGIDNAGLNTLVRHNSLR 410
Query: 135 KLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDS--DMKPLSGLTNLKSLQISCSKV 192
L + C + N + LMKLE L + I DS D+ PL L LK L + +
Sbjct: 411 NLAIWNC-----NVTNWQPLMKLELLEVL---LIDDSVTDLSPLRELDQLKYLLLWGDRF 462
Query: 193 TDSGIAYLK 201
+ + +A L+
Sbjct: 463 SPTELARLR 471
>gi|421897032|ref|ZP_16327415.1| type III effector gala6 protein [Ralstonia solanacearum MolK2]
gi|206588197|emb|CAQ18765.1| type III effector gala6 protein [Ralstonia solanacearum MolK2]
Length = 625
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 199/466 (42%), Gaps = 52/466 (11%)
Query: 3 PRDISQQIFNELV-YSRCLTEVSLEAFRDCALQDLCLGQYPGVN------DKWMDVIASQ 55
PR +++ EL SR + V+ RD A+ LG+YP + + ++ + +
Sbjct: 103 PRRAMREVNRELRNASRAV--VTHLTIRDPAMF-AHLGKYPALTSVRFKGELTLEALKAL 159
Query: 56 GSSLLSVDLS---GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLS 112
+ +D+S G V+++GL HL L+SL N I+I G L ++LTSLS
Sbjct: 160 PPGVEHLDISRCTGRGVSNAGLAHLA-TRPLKSLSLN-GIEIDAEGARLLATCASLTSLS 217
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGL--------MKLESLNIKW 164
+I + A A ++ LDL VN+ G L SLN+
Sbjct: 218 LT-GCSIGDRAATALAQSRSIASLDLS---------VNMIGPDGARALASAPLLSLNLH- 266
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
N I D L+ LKSL S + + D+G+ LT LNL G + A +L
Sbjct: 267 NNGIGDEGALALATSGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAGNMIGPAGARAL 326
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
SL L+L+ +L D G + + SL LNL NEI D+ L T L+SLNL
Sbjct: 327 RRNTSLTELDLSTNRLGDAGAQVLAGSRSLTSLNLRHNEIGDDGTEALARNTTLKSLNLS 386
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
IG G L G L+ L+L + G L+ T+L S++L I D R L
Sbjct: 387 YNPIGFWGAGALGGSTTLRELDLRCCAIDPYGASALARNTSLASLHLGSNRIGDDGARAL 446
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
A +L L+L I D G AL LT L+L+G + D GAA L
Sbjct: 447 ATSRTLTLLDLSRNNIHDAGAQALAGNGSLTSLNLYGNEVDDDGAAALAQHPR------- 499
Query: 405 GGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
L SLN+ +RI G +HL L L L ++
Sbjct: 500 -----------LTSLNLGRNRIGPNGAQHLAKSATLTELDLSENRI 534
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 158/407 (38%), Gaps = 53/407 (13%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLE-----------HLRGL 105
+SL S+ L+G + D L ++ SLD + + DG H G+
Sbjct: 211 ASLTSLSLTGCSIGDRAATALAQSRSIASLDLSVNMIGPDGARALASAPLLSLNLHNNGI 270
Query: 106 SNLTSLSFR----------RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLM 155
+ +L+ NN I G+ FA L +L+L G L+
Sbjct: 271 GDEGALALATSGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAGNMIGPAGARALRRNT 330
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 215
L L++ N + D+ + L+G +L SL + +++ D G L L LNL P
Sbjct: 331 SLTELDLS-TNRLGDAGAQVLAGSRSLTSLNLRHNEIGDDGTEALARNTTLKSLNLSYNP 389
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
+ +L +L L+L C + G ++ SL L+LG N
Sbjct: 390 IGFWGAGALGGSTTLRELDLRCCAIDPYGASALARNTSLASLHLGSNR------------ 437
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 335
IGD+G L L L+LS + +G + L+G +L S+NL
Sbjct: 438 ------------IGDDGARALATSRTLTLLDLSRNNIHDAGAQALAGNGSLTSLNLYGNE 485
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF 395
+ D LA L SLNL +I G L LT LDL RI GA L
Sbjct: 486 VDDDGAAALAQHPRLTSLNLGRNRIGPNGAQHLAKSATLTELDLSENRIGPEGAEALSLS 545
Query: 396 KNLRSLEICGGGLTDAGL-------TGLVSLNVSNSRITSAGLRHLK 435
L +L + G + + G T L SL+ N+R AG + L+
Sbjct: 546 TVLTTLNVSGNAIGEKGARAFAEKSTSLTSLDARNNRRGEAGAKMLE 592
>gi|46447197|ref|YP_008562.1| hypothetical protein pc1563 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400838|emb|CAF24287.1| hypothetical protein pc1563 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 380
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 110/209 (52%), Gaps = 5/209 (2%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD+ L+ LK+C NL+ L C ++D GL HL L L L+ +T G+
Sbjct: 172 LTDTHLLALKNCKNLKELHLQDCYMLTDAGLAHLASLVALQHLNLAGCRKLTDAGLAHLT 231
Query: 129 GLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L+ L L L C + GL +L L+ L+ L++ C +T + L L L+ L +
Sbjct: 232 PLVVLQYLSLAGCDNLTDAGLAHLTPLVALQHLDLNGCPNLTGVGLAHLKPLVALQHLNL 291
Query: 188 S-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDG 244
S C K+TD+G+A+LK L L LNL GC +T A L L L +L +L+L C L+D G
Sbjct: 292 SWCDKLTDAGLAHLKPLVALHYLNLAGCDKLTDAGLVHLMPLVTLQHLDLTACSNLTDVG 351
Query: 245 CEKFSKIGSLKVLNLGF-NEITDECLVHL 272
+ +L+ LNLG+ +TD L H+
Sbjct: 352 LAHLKPLVALQHLNLGWCPNLTDAGLAHI 380
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 122/244 (50%), Gaps = 30/244 (12%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGC 214
++E LN +TD+ + L NLK L + C +TD+G+A+L L L LNL GC
Sbjct: 160 EIEGLNFSEKYSLTDTHLLALKNCKNLKELHLQDCYMLTDAGLAHLASLVALQHLNLAGC 219
Query: 215 -PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVH 271
+T A L L+ L L YL+L C L+D G + + +L+ L+L G +T L H
Sbjct: 220 RKLTDAGLAHLTPLVVLQYLSLAGCDNLTDAGLAHLTPLVALQHLDLNGCPNLTGVGLAH 279
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
LK L L+ LNL C +L+D +GL HL L L +NL
Sbjct: 280 LKPLVALQHLNLSWCD------------------KLTD-----AGLAHLKPLVALHYLNL 316
Query: 332 S-FTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL-FGARITDSG 388
+ ++D L L L +L+ L+L A +TD GLA L L L HL+L + +TD+G
Sbjct: 317 AGCDKLTDAGLVHLMPLVTLQHLDLTACSNLTDVGLAHLKPLVALQHLNLGWCPNLTDAG 376
Query: 389 AAYL 392
A++
Sbjct: 377 LAHI 380
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 117/221 (52%), Gaps = 19/221 (8%)
Query: 247 KFSKI---GSLKVLNLGFNE---ITDECLVHLKGLTNLESLNLDSCGI-GDEGLVNLTGL 299
KF KI S ++ L F+E +TD L+ LK NL+ L+L C + D GL +L L
Sbjct: 149 KFEKILNHFSNEIEGLNFSEKYSLTDTHLLALKNCKNLKELHLQDCYMLTDAGLAHLASL 208
Query: 300 CNLKCLELSD-TQVGSSGLRHLSGLTNLESINLS-FTGISDGSLRKLAGLSSLKSLNLDA 357
L+ L L+ ++ +GL HL+ L L+ ++L+ ++D L L L +L+ L+L+
Sbjct: 209 VALQHLNLAGCRKLTDAGLAHLTPLVVLQYLSLAGCDNLTDAGLAHLTPLVALQHLDLNG 268
Query: 358 -RQITDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLT 414
+T GLA L L L HL+L + ++TD+G A+L+ L L + G LTDAGL
Sbjct: 269 CPNLTGVGLAHLKPLVALQHLNLSWCDKLTDAGLAHLKPLVALHYLNLAGCDKLTDAGLV 328
Query: 415 GLVSLNV-------SNSRITSAGLRHLKPLKNLRSLTLESC 448
L+ L + S +T GL HLKPL L+ L L C
Sbjct: 329 HLMPLVTLQHLDLTACSNLTDVGLAHLKPLVALQHLNLGWC 369
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 78/157 (49%), Gaps = 28/157 (17%)
Query: 62 VDLSGSD-VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
+ L+G D +TD+GL HL LQ LD N C ++ GL HL+
Sbjct: 239 LSLAGCDNLTDAGLAHLTPLVALQHLDLNGCPNLTGVGLAHLK----------------- 281
Query: 121 AQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGL 179
L+ L L+L C ++ GL +LK L+ L LN+ C+ +TD+ + L L
Sbjct: 282 --------PLVALQHLNLSWCDKLTDAGLAHLKPLVALHYLNLAGCDKLTDAGLVHLMPL 333
Query: 180 TNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGCP 215
L+ L + +CS +TD G+A+LK L L LNL CP
Sbjct: 334 VTLQHLDLTACSNLTDVGLAHLKPLVALQHLNLGWCP 370
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
Query: 58 SLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+L +DL+G ++T GL HLK LQ L+ ++C +++D GL HL+ L L L+
Sbjct: 260 ALQHLDLNGCPNLTGVGLAHLKPLVALQHLNLSWCDKLTDAGLAHLKPLVALHYLNLAGC 319
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDS 171
+ +T G+ L+ L LDL C+ + GL +LK L+ L+ LN+ WC +TD+
Sbjct: 320 DKLTDAGLVHLMPLVTLQHLDLTACSNLTDVGLAHLKPLVALQHLNLGWCPNLTDA 375
>gi|62632752|ref|NP_001015043.1| F-box and leucine-rich repeat protein 14b [Danio rerio]
gi|190338219|gb|AAI63001.1| F-box and leucine-rich repeat protein 14b [Danio rerio]
gi|190338703|gb|AAI63002.1| F-box and leucine-rich repeat protein 14b [Danio rerio]
Length = 400
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 170/327 (51%), Gaps = 32/327 (9%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMP------NIESLNLSGCYNLTDNGLGHAFVQEIPSLRV 121
Query: 160 LNIKWCNCITDSDMKPLSG-LTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGC-P 215
LN+ C ITDS + ++ L NL+ L++ CS +T++G+ + GL +L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIAQYLKNLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCRH 181
Query: 216 VTAACLDSLSALG--------SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-NEI 264
V+ + L+ + SL YL L CQ L+D + SK + LKVLNL F I
Sbjct: 182 VSDVGIGHLAGMTRSAAEGCLSLEYLTLQDCQKLTDLSLKHISKGLTKLKVLNLSFCGGI 241
Query: 265 TDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRHLS 321
+D ++HL +T+L SLNL SC I D G+++L G L L++S ++G L +++
Sbjct: 242 SDAGMIHLSHMTSLWSLNLRSCDNISDTGIMHLAMGTLRLSGLDVSFCDKIGDQSLAYIA 301
Query: 322 -GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALT-SLTGLTHL 377
GL L+S++L ISD + R + + L++LN+ +ITD GL + LT LT +
Sbjct: 302 QGLYQLKSLSLCSCHISDDGINRMVRQMHELRTLNIGQCVRITDKGLELIADHLTQLTGI 361
Query: 378 DLFG-ARITDSGAAYLRNFKNLRSLEI 403
DL+G +IT G + L+ L +
Sbjct: 362 DLYGCTKITKRGLERITQLPCLKVLNL 388
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 143/286 (50%), Gaps = 33/286 (11%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEH 101
+ D + IA +L ++L G S++T++GL+ + L+SL+ C +SD G+ H
Sbjct: 130 ITDSSLGRIAQYLKNLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSDVGIGH 189
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLES 159
L G++ A G ++L L L+ C ++ L ++ KGL KL+
Sbjct: 190 LAGMTR-----------------SAAEGCLSLEYLTLQDCQKLTDLSLKHISKGLTKLKV 232
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGCPVT 217
LN+ +C I+D+ M LS +T+L SL + SC ++D+GI +L G +L+ L++ C
Sbjct: 233 LNLSFCGGISDAGMIHLSHMTSLWSLNLRSCDNISDTGIMHLAMGTLRLSGLDVSFCDKI 292
Query: 218 AACLDSLSALGSLFY----LNLNRCQLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVH 271
SL+ + Y L+L C +SDDG + + + L+ LN+G ITD+ L
Sbjct: 293 GD--QSLAYIAQGLYQLKSLSLCSCHISDDGINRMVRQMHELRTLNIGQCVRITDKGLEL 350
Query: 272 LK-GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSS 315
+ LT L ++L C I GL +T L LK L L Q+ S
Sbjct: 351 IADHLTQLTGIDLYGCTKITKRGLERITQLPCLKVLNLGLWQMTES 396
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 92/197 (46%), Gaps = 39/197 (19%)
Query: 272 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 322
++G+ N+ESLNL C G+G + + L L C +++D+ +G R
Sbjct: 86 IQGMPNIESLNLSGCYNLTDNGLGHAFVQEIPSLRVLNLSLCKQITDSSLG----RIAQY 141
Query: 323 LTNLESINLS-FTGISDGSLRKLA-GLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL 379
L NLE + L + I++ L +A GL LKSLNL + R ++D G+ L +T
Sbjct: 142 LKNLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSDVGIGHLAGMT------- 194
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTD-------AGLTGLVSLNVSN-SRITSAGL 431
R G L +L+ C LTD GLT L LN+S I+ AG+
Sbjct: 195 ---RSAAEGCLSLEYL----TLQDCQK-LTDLSLKHISKGLTKLKVLNLSFCGGISDAGM 246
Query: 432 RHLKPLKNLRSLTLESC 448
HL + +L SL L SC
Sbjct: 247 IHLSHMTSLWSLNLRSC 263
>gi|149174147|ref|ZP_01852775.1| hypothetical protein PM8797T_13198 [Planctomyces maris DSM 8797]
gi|148847127|gb|EDL61462.1| hypothetical protein PM8797T_13198 [Planctomyces maris DSM 8797]
Length = 476
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 20/198 (10%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
+ +TD ++ + + L +S SKVTD+GI YL+G +L LNL G VT A L+ L
Sbjct: 265 SAVTDQILRDFNYWNKVSGLWLSRSKVTDAGIEYLRGATRLYSLNLSGTEVTDATLEHLK 324
Query: 226 ALGSLFYLNLNRCQLSDDGC-EKFSKIGSLKV-----------------LNLGFNEITDE 267
L L +NL Q+S G E + S+++ L L +T E
Sbjct: 325 GLPELHSVNLRGTQVSPRGVLELIASSDSMQIAFPGGWVWKLENAHGFQLKLSSPAVTGE 384
Query: 268 CLVHLKGLTNLES-LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
L+ L G +++ L+LD + DEGL +L G +L+ L +S+TQ+ S+GL HL+GL +L
Sbjct: 385 -LLKLFGTVRVQAYLDLDGIALTDEGLASLGGFEDLRTLRISNTQISSAGLNHLAGLASL 443
Query: 327 ESINLSFTGISDGSLRKL 344
++L + ++D + KL
Sbjct: 444 RELDLRGSAVADEDINKL 461
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 112/234 (47%), Gaps = 25/234 (10%)
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
+ +L ++D F+ + L L +++TD + +L+G T L SLNL + D
Sbjct: 259 FESLGHSAVTDQILRDFNYWNKVSGLWLSRSKVTDAGIEYLRGATRLYSLNLSGTEVTDA 318
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
L +L GL L + L TQV G+ L + + +S+ ++F G G + KL +
Sbjct: 319 TLEHLKGLPELHSVNLRGTQVSPRGVLEL--IASSDSMQIAFPG---GWVWKLENAHGFQ 373
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
L L + +T L ++ +LDL G +TD G A L F++LR+L I
Sbjct: 374 -LKLSSPAVTGELLKLFGTVRVQAYLDLDGIALTDEGLASLGGFEDLRTLRI-------- 424
Query: 412 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 465
SN++I+SAGL HL L +LR L L V DI +LQ R LPN
Sbjct: 425 ----------SNTQISSAGLNHLAGLASLRELDLRGSAVADEDINKLQ-RALPN 467
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 115/246 (46%), Gaps = 23/246 (9%)
Query: 22 EVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCS 81
E+S+ FRD + L + V D+ + + + + + LS S VTD+G+ +L+ +
Sbjct: 248 EISMVEFRDTGFESLG---HSAVTDQILRDF-NYWNKVSGLWLSRSKVTDAGIEYLRGAT 303
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC 141
L SL+ + +++D LEHL+GL L S++ R + G++ L+
Sbjct: 304 RLYSLNLS-GTEVTDATLEHLKGLPELHSVNLRGTQV-------SPRGVLELIASSDSMQ 355
Query: 142 TRIHGGLVNLKGLMKLES---LNIKWCNCITDSDMKPLSGLTNLKS-LQISCSKVTDSGI 197
GG V KLE+ +K + ++ L G +++ L + +TD G+
Sbjct: 356 IAFPGGWV-----WKLENAHGFQLKLSSPAVTGELLKLFGTVRVQAYLDLDGIALTDEGL 410
Query: 198 AYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
A L G + L L + +++A L+ L+ L SL L+L ++D+ K + +L
Sbjct: 411 ASLGGFEDLRTLRISNTQISSAGLNHLAGLASLRELDLRGSAVADEDINKLQR--ALPNC 468
Query: 258 NLGFNE 263
+ +NE
Sbjct: 469 KIDWNE 474
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 18/127 (14%)
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
+FT I+ G + +L +TD L ++ L L +++TD+G Y
Sbjct: 239 AFTTIAAGDEISMVEFRDTGFESLGHSAVTDQILRDFNYWNKVSGLWLSRSKVTDAGIEY 298
Query: 392 LRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
LR G T L SLN+S + +T A L HLK L L S+ L +V+
Sbjct: 299 LR------------------GATRLYSLNLSGTEVTDATLEHLKGLPELHSVNLRGTQVS 340
Query: 452 ANDIKRL 458
+ L
Sbjct: 341 PRGVLEL 347
>gi|290974572|ref|XP_002670019.1| leucine-rich repeat protein [Naegleria gruberi]
gi|284083573|gb|EFC37275.1| leucine-rich repeat protein [Naegleria gruberi]
Length = 334
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 109/189 (57%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N I D +K +S L L SL +S +++ D G+ + L++LT L++ + A + S+S
Sbjct: 145 NGIGDEGVKLISELKQLTSLNMSNNRIGDEGVKLISELKQLTSLDISLNDIGAEGVKSIS 204
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
+ L LN+N ++ D+G + S++ L LN+ N I DE + + + L SLN+ +
Sbjct: 205 EMKQLTSLNINYNRIGDEGVKLISELKQLTSLNISNNGIGDEGVKLISEMKQLTSLNISN 264
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
GIGDEG+ +++ L L L +S+ ++G+ G + +S + L S+++++ I D ++ ++
Sbjct: 265 NGIGDEGVKSISELKQLTSLNISNNRIGAEGAKSISEMKQLTSLSINYNQIGDEGVKSIS 324
Query: 346 GLSSLKSLN 354
+ L SLN
Sbjct: 325 DMKQLTSLN 333
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 8/203 (3%)
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
+ L SL + GIGDEG+ ++ L L L +S+ ++G G++ +S L L S+++S
Sbjct: 134 MKQLTSLIISDNGIGDEGVKLISELKQLTSLNMSNNRIGDEGVKLISELKQLTSLDISLN 193
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
I ++ ++ + L SLN++ +I D G+ ++ L LT L++ I D G +
Sbjct: 194 DIGAEGVKSISEMKQLTSLNINYNRIGDEGVKLISELKQLTSLNISNNGIGDEGVKLISE 253
Query: 395 FKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
K L SL I G+ D G L L SLN+SN+RI + G + + +K L SL++
Sbjct: 254 MKQLTSLNISNNGIGDEGVKSISELKQLTSLNISNNRIGAEGAKSISEMKQLTSLSINYN 313
Query: 449 KVTANDIKRLQSRDLPNLVSFRP 471
++ +K + D+ L S
Sbjct: 314 QIGDEGVKSI--SDMKQLTSLNK 334
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 111/205 (54%)
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K +S + L SL IS + + D G+ + L++LT LN+ + + +S L L L
Sbjct: 129 KFISEMKQLTSLIISDNGIGDEGVKLISELKQLTSLNMSNNRIGDEGVKLISELKQLTSL 188
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+++ + +G + S++ L LN+ +N I DE + + L L SLN+ + GIGDEG+
Sbjct: 189 DISLNDIGAEGVKSISEMKQLTSLNINYNRIGDEGVKLISELKQLTSLNISNNGIGDEGV 248
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
++ + L L +S+ +G G++ +S L L S+N+S I + ++ + L SL
Sbjct: 249 KLISEMKQLTSLNISNNGIGDEGVKSISELKQLTSLNISNNRIGAEGAKSISEMKQLTSL 308
Query: 354 NLDARQITDTGLAALTSLTGLTHLD 378
+++ QI D G+ +++ + LT L+
Sbjct: 309 SINYNQIGDEGVKSISDMKQLTSLN 333
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 107/204 (52%)
Query: 198 AYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
++ +++LT L + + + +S L L LN++ ++ D+G + S++ L L
Sbjct: 129 KFISEMKQLTSLIISDNGIGDEGVKLISELKQLTSLNMSNNRIGDEGVKLISELKQLTSL 188
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGL 317
++ N+I E + + + L SLN++ IGDEG+ ++ L L L +S+ +G G+
Sbjct: 189 DISLNDIGAEGVKSISEMKQLTSLNINYNRIGDEGVKLISELKQLTSLNISNNGIGDEGV 248
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
+ +S + L S+N+S GI D ++ ++ L L SLN+ +I G +++ + LT L
Sbjct: 249 KLISEMKQLTSLNISNNGIGDEGVKSISELKQLTSLNISNNRIGAEGAKSISEMKQLTSL 308
Query: 378 DLFGARITDSGAAYLRNFKNLRSL 401
+ +I D G + + K L SL
Sbjct: 309 SINYNQIGDEGVKSISDMKQLTSL 332
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%)
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
+ D+G + S++ L LN+ N I DE + + L L SL++ IG EG+ +++ +
Sbjct: 147 IGDEGVKLISELKQLTSLNMSNNRIGDEGVKLISELKQLTSLDISLNDIGAEGVKSISEM 206
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 359
L L ++ ++G G++ +S L L S+N+S GI D ++ ++ + L SLN+
Sbjct: 207 KQLTSLNINYNRIGDEGVKLISELKQLTSLNISNNGIGDEGVKLISEMKQLTSLNISNNG 266
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL 416
I D G+ +++ L LT L++ RI GA + K L SL I + D G+ +
Sbjct: 267 IGDEGVKSISELKQLTSLNISNNRIGAEGAKSISEMKQLTSLSINYNQIGDEGVKSI 323
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 30/171 (17%)
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
+ +S + L S+ +S GI D ++ ++ L L SLN+ +I D G+ ++ L LT L
Sbjct: 129 KFISEMKQLTSLIISDNGIGDEGVKLISELKQLTSLNMSNNRIGDEGVKLISELKQLTSL 188
Query: 378 DL----FGA--------------------RITDSGAAYLRNFKNLRSLEICGGGLTDAG- 412
D+ GA RI D G + K L SL I G+ D G
Sbjct: 189 DISLNDIGAEGVKSISEMKQLTSLNINYNRIGDEGVKLISELKQLTSLNISNNGIGDEGV 248
Query: 413 -----LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
+ L SLN+SN+ I G++ + LK L SL + + ++ A K +
Sbjct: 249 KLISEMKQLTSLNISNNGIGDEGVKSISELKQLTSLNISNNRIGAEGAKSI 299
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 28/216 (12%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
G+ D+ + +I S+ L S+++S + + D G+ + + L SLD +
Sbjct: 146 GIGDEGVKLI-SELKQLTSLNMSNNRIGDEGVKLISELKQLTSLDISL------------ 192
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
N I A+G+K+ + + L L++ G+ + L +L SLNI
Sbjct: 193 --------------NDIGAEGVKSISEMKQLTSLNINYNRIGDEGVKLISELKQLTSLNI 238
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
N I D +K +S + L SL IS + + D G+ + L++LT LN+ + A
Sbjct: 239 S-NNGIGDEGVKLISEMKQLTSLNISNNGIGDEGVKSISELKQLTSLNISNNRIGAEGAK 297
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN 258
S+S + L L++N Q+ D+G + S + L LN
Sbjct: 298 SISEMKQLTSLSINYNQIGDEGVKSISDMKQLTSLN 333
>gi|300694035|ref|YP_003750008.1| type III effector protein [Ralstonia solanacearum PSI07]
gi|299076072|emb|CBJ35382.1| putative leucine-rich-repeat type III effector protein (GALA1-like)
[Ralstonia solanacearum PSI07]
Length = 590
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 185/414 (44%), Gaps = 18/414 (4%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC-IQISDGGLEHLRGLSNLTSLSFRR 115
++L + LSG DVTD L L ++L++LD + C QI+ G+ HL L L L+
Sbjct: 121 AALEKLTLSG-DVTDDDLKGLP--ASLKALDLSDCRAQITSEGIAHLSKLP-LVRLNVSH 176
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
N I A+G + A + L +LD+ G L L LN+ N I D +
Sbjct: 177 NR-IDAEGARLLAAMPTLTELDISHNDIRADGAQALADSATLTLLNVG-NNRIGDRGAQA 234
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L+ T L SL S + + +G+ L L L+L + +L+ +L LN+
Sbjct: 235 LAANTKLTSLNASANGIGSAGVQALAANATLAALDLSCTSIDEESAQALARNTTLTSLNV 294
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
+L D G + +L LN+ NEI E L T+L SL++ +G +G
Sbjct: 295 RLSRLGDAGARALAATTTLTSLNVSLNEIGPEGAKALANNTSLTSLDIGGNKVGVDGAQA 354
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L L L + ++ +G + L+ T L S+++S G+ R +L SL +
Sbjct: 355 LATSMTLTSLVIHRNRIEVAGAQALANNTRLTSLDISDNGLGVWGARAFVDNETLTSLRI 414
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL-- 413
I D G L T LT LD+ RI ++GA L L SL I G + G+
Sbjct: 415 ATNMIGDEGAKWLARNTTLTSLDIGENRIGETGAQALAGNTKLTSLNISGNAIGMMGVLR 474
Query: 414 ----TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDL 463
T L +LNVS ++I AG + L R+ TL S V N+I +R L
Sbjct: 475 LARNTTLAALNVSRNQIGVAGAQDLA-----RNTTLRSLVVNYNEIGNEGARAL 523
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 118/252 (46%), Gaps = 3/252 (1%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L S+++S +++ G L + ++L SLD ++ G + L LTSL RN
Sbjct: 311 TTLTSLNVSLNEIGPEGAKALANNTSLTSLDIGGN-KVGVDGAQALATSMTLTSLVIHRN 369
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
I G +A A L LD+ G L SL I N I D K L
Sbjct: 370 R-IEVAGAQALANNTRLTSLDISDNGLGVWGARAFVDNETLTSLRIA-TNMIGDEGAKWL 427
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+ T L SL I +++ ++G L G KLT LN+ G + + L+ +L LN++
Sbjct: 428 ARNTTLTSLDIGENRIGETGAQALAGNTKLTSLNISGNAIGMMGVLRLARNTTLAALNVS 487
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
R Q+ G + ++ +L+ L + +NEI +E L G L SL++ C IGDEG L
Sbjct: 488 RNQIGVAGAQDLARNTTLRSLVVNYNEIGNEGARALAGNKTLASLSVVDCRIGDEGAHAL 547
Query: 297 TGLCNLKCLELS 308
L L++S
Sbjct: 548 AANTTLALLDVS 559
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 175/383 (45%), Gaps = 12/383 (3%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
+L +D+S +D+ G L D + L L+ +I D G + L + LTSL+ N
Sbjct: 192 TLTELDISHNDIRADGAQALADSATLTLLNVGNN-RIGDRGAQALAANTKLTSLNASAN- 249
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
I + G++A A L LDL CT I L L SLN++ + D+ + L
Sbjct: 250 GIGSAGVQALAANATLAALDLS-CTSIDEESAQALARNTTLTSLNVRLSR-LGDAGARAL 307
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+ T L SL +S +++ G L LT L++ G V +L+ +L L ++
Sbjct: 308 AATTTLTSLNVSLNEIGPEGAKALANNTSLTSLDIGGNKVGVDGAQALATSMTLTSLVIH 367
Query: 237 RCQLSDDGCEKFS---KIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
R ++ G + + ++ SL + + G V + LT SL + + IGDEG
Sbjct: 368 RNRIEVAGAQALANNTRLTSLDISDNGLGVWGARAFVDNETLT---SLRIATNMIGDEGA 424
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
L L L++ + ++G +G + L+G T L S+N+S I + +LA ++L +L
Sbjct: 425 KWLARNTTLTSLDIGENRIGETGAQALAGNTKLTSLNISGNAIGMMGVLRLARNTTLAAL 484
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL 413
N+ QI G L T L L + I + GA L K L SL + + D G
Sbjct: 485 NVSRNQIGVAGAQDLARNTTLRSLVVNYNEIGNEGARALAGNKTLASLSVVDCRIGDEGA 544
Query: 414 TGLVSLNVSNSRITSAGLRHLKP 436
L + N + + + + RH++P
Sbjct: 545 HALAA-NTTLALLDVSLNRHIRP 566
>gi|290977840|ref|XP_002671645.1| member of the leucine-rich repeat protein family [Naegleria
gruberi]
gi|284085215|gb|EFC38901.1| member of the leucine-rich repeat protein family [Naegleria
gruberi]
Length = 392
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 130/253 (51%), Gaps = 9/253 (3%)
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
L L + + + D G++Y+ L KLT LN+ +++ LS + L YL+++ ++
Sbjct: 109 LVDLDMKMNNIGDIGVSYISNLTKLTKLNVSYNRISSEGAKYLSKMKQLTYLDISHNKIG 168
Query: 242 DDGCEKF--SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
+DG KF + I L LN+ +NEI + + L L SLN+ IGD+G+ +L +
Sbjct: 169 EDGS-KFICNGIRQLTHLNIYYNEIGVRGVKFIGALKQLTSLNVGGNRIGDQGIEHLMRM 227
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 359
L L +S+ + G + +S +T L ++N+ I D + ++ + L L++
Sbjct: 228 HQLVDLNISNNNIRVEGAKLVSEMTQLTNLNIRKNIIGDDGAKYISEMKQLIKLDIGKNY 287
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA------GL 413
+++ G ++ + LT+LD+ I + GA ++ K L +L + G +TD GL
Sbjct: 288 LSNRGAKYISEMKYLTNLDIRSNNIREEGAEFIGEMKQLTNLNLNGNYITDEGIKHLCGL 347
Query: 414 TGLVSLNVSNSRI 426
LVSL++ N+ I
Sbjct: 348 YQLVSLSIYNTGI 360
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 4/271 (1%)
Query: 125 KAFAGLIN--LVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNL 182
K F+ ++ LV LD++ G+ + L KL LN+ + N I+ K LS + L
Sbjct: 99 KIFSAMMKNRLVDLDMKMNNIGDIGVSYISNLTKLTKLNVSY-NRISSEGAKYLSKMKQL 157
Query: 183 KSLQISCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
L IS +K+ + G ++ G+++LT LN+ + + + AL L LN+ ++
Sbjct: 158 TYLDISHNKIGEDGSKFICNGIRQLTHLNIYYNEIGVRGVKFIGALKQLTSLNVGGNRIG 217
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
D G E ++ L LN+ N I E + +T L +LN+ IGD+G ++ +
Sbjct: 218 DQGIEHLMRMHQLVDLNISNNNIRVEGAKLVSEMTQLTNLNIRKNIIGDDGAKYISEMKQ 277
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
L L++ + + G +++S + L ++++ I + + + L +LNL+ IT
Sbjct: 278 LIKLDIGKNYLSNRGAKYISEMKYLTNLDIRSNNIREEGAEFIGEMKQLTNLNLNGNYIT 337
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
D G+ L L L L ++ I A L
Sbjct: 338 DEGIKHLCGLYQLVSLSIYNTGIQMEDGAKL 368
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
+I D G+EHL + L L+ NN I +G K + + L L++ + G +
Sbjct: 215 RIGDQGIEHLMRMHQLVDLNISNNN-IRVEGAKLVSEMTQLTNLNIRKNIIGDDGAKYIS 273
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
+ +L L+I N +++ K +S + L +L I + + + G ++ +++LT LNL
Sbjct: 274 EMKQLIKLDI-GKNYLSNRGAKYISEMKYLTNLDIRSNNIREEGAEFIGEMKQLTNLNLN 332
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLS-DDGCEKFSK 250
G +T + L L L L++ + +DG + S+
Sbjct: 333 GNYITDEGIKHLCGLYQLVSLSIYNTGIQMEDGAKLLSE 371
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 82/161 (50%), Gaps = 5/161 (3%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDF-NFCIQISDGGLEHLRGLSNLTSLSFRR 115
L S+++ G+ + D G+ HL L L+ N I++ G + + ++ LT+L+ R+
Sbjct: 204 KQLTSLNVGGNRIGDQGIEHLMRMHQLVDLNISNNNIRVE--GAKLVSEMTQLTNLNIRK 261
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
N I G K + + L+KLD+ + + G + + L +L+I+ N I + +
Sbjct: 262 -NIIGDDGAKYISEMKQLIKLDIGKNYLSNRGAKYISEMKYLTNLDIR-SNNIREEGAEF 319
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV 216
+ + L +L ++ + +TD GI +L GL +L L++ +
Sbjct: 320 IGEMKQLTNLNLNGNYITDEGIKHLCGLYQLVSLSIYNTGI 360
>gi|290994342|ref|XP_002679791.1| predicted protein [Naegleria gruberi]
gi|284093409|gb|EFC47047.1| predicted protein [Naegleria gruberi]
Length = 300
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 138/275 (50%), Gaps = 7/275 (2%)
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NL SL IS + + + G Y+ L LT+L++ G + A + +S + + L++ L
Sbjct: 4 NLTSLNISRNWIGEEGAKYISELDNLTILDIHGNDIVANGANHISKMKRITTLSVGLNNL 63
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
+G + S++ L L + N I +E + GL L L++ IGD G +L+ L
Sbjct: 64 GKEGTKYISEMKQLTNLEINNNNIQEEGAKFISGLKQLTELSIHFNNIGDVGTKHLSELK 123
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
L L + + +G G++H+ + L +++S I ++G++ L+ L++++ I
Sbjct: 124 QLTRLNIGENNIGDEGVKHILEMKQLTDLDISNNNIRHKGSEYISGMNQLRILDINSCNI 183
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LT 414
G ++ + LT L++ + D GA ++ + K L +LE+ ++D G ++
Sbjct: 184 DPIGAQKISEMKQLTDLNIAWNQFGDEGAKFISDMKQLTTLELFNCDISDIGAKCVSEMS 243
Query: 415 GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
L +L++ + ++ G+R + +K L L++ S K
Sbjct: 244 KLTNLDIGENNLSDEGVRAVSNMK-LMILSVSSSK 277
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 111/229 (48%), Gaps = 6/229 (2%)
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
+L LN++R + ++G + S++ +L +L++ N+I H+ + + +L++ +
Sbjct: 4 NLTSLNISRNWIGEEGAKYISELDNLTILDIHGNDIVANGANHISKMKRITTLSVGLNNL 63
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
G EG ++ + L LE+++ + G + +SGL L +++ F I D + L+ L
Sbjct: 64 GKEGTKYISEMKQLTNLEINNNNIQEEGAKFISGLKQLTELSIHFNNIGDVGTKHLSELK 123
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG--- 405
L LN+ I D G+ + + LT LD+ I G+ Y+ LR L+I
Sbjct: 124 QLTRLNIGENNIGDEGVKHILEMKQLTDLDISNNNIRHKGSEYISGMNQLRILDINSCNI 183
Query: 406 ---GGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
G + + L LN++ ++ G + + +K L +L L +C ++
Sbjct: 184 DPIGAQKISEMKQLTDLNIAWNQFGDEGAKFISDMKQLTTLELFNCDIS 232
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 139/290 (47%), Gaps = 26/290 (8%)
Query: 107 NLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCN 166
NLTSL+ RN I +G K + L NL LD+ + G ++ + ++ +L++ N
Sbjct: 4 NLTSLNISRN-WIGEEGAKYISELDNLTILDIHGNDIVANGANHISKMKRITTLSVG-LN 61
Query: 167 CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA 226
+ K +S + L +L+I+ + + + G ++ GL++LT L
Sbjct: 62 NLGKEGTKYISEMKQLTNLEINNNNIQEEGAKFISGLKQLTEL----------------- 104
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC 286
S+ + N+ D G + S++ L LN+G N I DE + H+ + L L++ +
Sbjct: 105 --SIHFNNI-----GDVGTKHLSELKQLTRLNIGENNIGDEGVKHILEMKQLTDLDISNN 157
Query: 287 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAG 346
I +G ++G+ L+ L+++ + G + +S + L +N+++ D + ++
Sbjct: 158 NIRHKGSEYISGMNQLRILDINSCNIDPIGAQKISEMKQLTDLNIAWNQFGDEGAKFISD 217
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
+ L +L L I+D G ++ ++ LT+LD+ ++D G + N K
Sbjct: 218 MKQLTTLELFNCDISDIGAKCVSEMSKLTNLDIGENNLSDEGVRAVSNMK 267
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 3/198 (1%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L +++++ +++ + G + L L +F I D G +HL L LT L+
Sbjct: 72 SEMKQLTNLEINNNNIQEEGAKFISGLKQLTELSIHFN-NIGDVGTKHLSELKQLTRLNI 130
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
NN I +G+K + L LD+ H G + G+ +L L+I CN I
Sbjct: 131 GENN-IGDEGVKHILEMKQLTDLDISNNNIRHKGSEYISGMNQLRILDINSCN-IDPIGA 188
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
+ +S + L L I+ ++ D G ++ +++LT L L C ++ +S + L L
Sbjct: 189 QKISEMKQLTDLNIAWNQFGDEGAKFISDMKQLTTLELFNCDISDIGAKCVSEMSKLTNL 248
Query: 234 NLNRCQLSDDGCEKFSKI 251
++ LSD+G S +
Sbjct: 249 DIGENNLSDEGVRAVSNM 266
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 6/140 (4%)
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI 384
NL S+N+S I + + ++ L +L L++ I G ++ + +T L + +
Sbjct: 4 NLTSLNISRNWIGEEGAKYISELDNLTILDIHGNDIVANGANHISKMKRITTLSVGLNNL 63
Query: 385 TDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLK 438
G Y+ K L +LEI + + +GL L L++ + I G +HL LK
Sbjct: 64 GKEGTKYISEMKQLTNLEINNNNIQEEGAKFISGLKQLTELSIHFNNIGDVGTKHLSELK 123
Query: 439 NLRSLTLESCKVTANDIKRL 458
L L + + +K +
Sbjct: 124 QLTRLNIGENNIGDEGVKHI 143
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 26/180 (14%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
+++ D G HL + L L+ I D G++H+ + LT L NN I +G +
Sbjct: 109 NNIGDVGTKHLSELKQLTRLNIGEN-NIGDEGVKHILEMKQLTDLDISNNN-IRHKGSEY 166
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW---------------------- 164
+G+ L LD+ C G + + +L LNI W
Sbjct: 167 ISGMNQLRILDINSCNIDPIGAQKISEMKQLTDLNIAWNQFGDEGAKFISDMKQLTTLEL 226
Query: 165 CNC-ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
NC I+D K +S ++ L +L I + ++D G+ + + KL +L++ A D+
Sbjct: 227 FNCDISDIGAKCVSEMSKLTNLDIGENNLSDEGVRAVSNM-KLMILSVSSSKKGQAKKDA 285
>gi|449464060|ref|XP_004149747.1| PREDICTED: uncharacterized protein LOC101203036 [Cucumis sativus]
gi|449505065|ref|XP_004162366.1| PREDICTED: uncharacterized protein LOC101225004 [Cucumis sativus]
Length = 586
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 191/458 (41%), Gaps = 86/458 (18%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEH 101
V+ +WM + S L S+++S ++ SG+ + + L+ L+ + C++++D G+ H
Sbjct: 73 AVDSEWMAYLGS-FRYLQSLNVSNCHRLSSSGVWTISGMTTLRELNVSRCLKVTDAGIRH 131
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL- 160
L + L L ITA G+ + L LV LDL L +L+ L KL+ L
Sbjct: 132 LLSIPTLEKLCIAET-GITAHGVTLLSSLKTLVFLDLGGLPVTDQALSSLQVLTKLQYLD 190
Query: 161 -----------------------NIKWC-----------------NCITDSDMKPLSGLT 180
NI W NCI DS +K L
Sbjct: 191 LWGSKISNSGSDVLQMFPKLSFLNIAWTSVTKFPNLPHLECLNMSNCIIDSTLKGLGA-- 248
Query: 181 NLKSLQISCSKVTDSGIAY--------LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
++ K+ SG + + L L+ + C LS + ++ +
Sbjct: 249 -----KVPPRKLIASGATFSNETEDLGFVAMDALYYLDFSNASLHRFCF--LSRMKAVEH 301
Query: 233 LNLNRCQLSDDGCEKFSKIG-SLKVLNLGFNEITDECLVHLKG-LTNLESLNLDSCGIGD 290
L+L+ + D E + +G +LK LNL ++ + L G ++NLE+L+L + D
Sbjct: 302 LDLSSTTIGDSSVELIASVGENLKYLNLSCTAVSSSGIGSLAGKVSNLETLSLSHTMVDD 361
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG--------------LTNLESINLSFTGI 336
L + + +LKC++LS+T + G HLS L LE +NL T +
Sbjct: 362 VALSYMNMMPSLKCIDLSETDI--KGYIHLSAPETVKVFSLTELQNLDCLEMLNLEHTHV 419
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
D SLR L+ L L L + TDT L+ L+ L L L + A +T+ +
Sbjct: 420 DDESLRPLSRFRKLSHLMLRSPSFTDTVLSYLSILPNLKTLSIRDAVLTNQAFDTFKPVA 479
Query: 397 NLRSLEICGGG-LTDAGLTGLVSLNVSNSRITSAGLRH 433
L+ +++ G LT+ GL+ V + R +RH
Sbjct: 480 TLQKIDLRGCWLLTEDGLS------VFHRRFPQIDVRH 511
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 103/442 (23%), Positives = 176/442 (39%), Gaps = 96/442 (21%)
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMK 174
NA+ ++ M L L++ C R+ G+ + G+ L LN+ C +TD+ ++
Sbjct: 71 ENAVDSEWMAYLGSFRYLQSLNVSNCHRLSSSGVWTISGMTTLRELNVSRCLKVTDAGIR 130
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L + L+ L I+ + +T G+ L L+ L L+L G PVT L SL L L YL+
Sbjct: 131 HLLSIPTLEKLCIAETGITAHGVTLLSSLKTLVFLDLGGLPVTDQALSSLQVLTKLQYLD 190
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-------G 287
L ++S+ G + L LN+ + +T L +LE LN+ +C G
Sbjct: 191 LWGSKISNSGSDVLQMFPKLSFLNIAWTSVTK-----FPNLPHLECLNMSNCIIDSTLKG 245
Query: 288 IG--------------------DEGLVNLTGLCNL-------------------KCLELS 308
+G D G V + L L + L+LS
Sbjct: 246 LGAKVPPRKLIASGATFSNETEDLGFVAMDALYYLDFSNASLHRFCFLSRMKAVEHLDLS 305
Query: 309 DTQVGSSGLRHLSGL-TNLESINLSFTGISDGSLRKLAG-LSSLKSLNLDARQITDTGLA 366
T +G S + ++ + NL+ +NLS T +S + LAG +S+L++L+L + D L+
Sbjct: 306 STTIGDSSVELIASVGENLKYLNLSCTAVSSSGIGSLAGKVSNLETLSLSHTMVDDVALS 365
Query: 367 AL-------------TSLTGLTH-----------------------LDLFGARITDSGAA 390
+ T + G H L+L + D
Sbjct: 366 YMNMMPSLKCIDLSETDIKGYIHLSAPETVKVFSLTELQNLDCLEMLNLEHTHVDDESLR 425
Query: 391 YLRNFKNLRSLEICGGGLTDAGLT------GLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
L F+ L L + TD L+ L +L++ ++ +T+ KP+ L+ +
Sbjct: 426 PLSRFRKLSHLMLRSPSFTDTVLSYLSILPNLKTLSIRDAVLTNQAFDTFKPVATLQKID 485
Query: 445 LESCKVTANDIKRLQSRDLPNL 466
L C + D + R P +
Sbjct: 486 LRGCWLLTEDGLSVFHRRFPQI 507
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 377 LDLFGARITDS-GAAYLRNFKNLRSLEIC-------GGGLTDAGLTGLVSLNVSNS-RIT 427
+DL G DS AYL +F+ L+SL + G T +G+T L LNVS ++T
Sbjct: 66 VDLSGENAVDSEWMAYLGSFRYLQSLNVSNCHRLSSSGVWTISGMTTLRELNVSRCLKVT 125
Query: 428 SAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
AG+RHL + L L + +TA+ + L S
Sbjct: 126 DAGIRHLLSIPTLEKLCIAETGITAHGVTLLSS 158
>gi|209154948|gb|ACI33706.1| F-box/LRR-repeat protein 14 [Salmo salar]
Length = 400
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 170/327 (51%), Gaps = 32/327 (9%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMP------NIESLNLSGCYNLTDNGLGHAFVQEIPSLRV 121
Query: 160 LNIKWCNCITDSDMKPLSG-LTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGC-P 215
LN+ C ITDS + ++ L NL+ L++ CS +T++G+ + GL +L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIAQYLKNLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCRH 181
Query: 216 VTAACLDSLSALG--------SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-NEI 264
V+ + L+ + +L YL L CQ L+D + SK + L+VLNL F I
Sbjct: 182 VSDVGIGHLAGMTRSAAEGCLNLEYLTLQDCQKLTDLSLKHISKGLAKLRVLNLSFCGGI 241
Query: 265 TDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRHLS 321
+D ++HL +T+L SLNL SC I D G+++L G L L++S ++G L +++
Sbjct: 242 SDAGMIHLSHMTSLWSLNLRSCDNISDTGIMHLAMGTLRLSGLDMSFCDKIGDQSLAYIA 301
Query: 322 -GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALT-SLTGLTHL 377
GL L+S++L ISD + R + + L++LN+ +ITD GL + LT LT +
Sbjct: 302 QGLYQLKSLSLCSCHISDDGINRMVRQMHELRTLNIGQCVRITDKGLELIADHLTQLTGI 361
Query: 378 DLFG-ARITDSGAAYLRNFKNLRSLEI 403
DL+G +IT G + L+ L +
Sbjct: 362 DLYGCTKITKRGLERITQLPCLKVLNL 388
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 168/307 (54%), Gaps = 26/307 (8%)
Query: 82 NLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLI-NLVKLDL 138
N++SL+ + C ++D GL H ++ + +L L+ IT + A + NL L+L
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQEIPSLRVLNLSLCKQITDSSLGRIAQYLKNLEVLEL 150
Query: 139 ERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT--------NLKSLQIS 188
C+ I G L+ GL +L+SLN++ C ++D + L+G+T NL+ L +
Sbjct: 151 GGCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSDVGIGHLAGMTRSAAEGCLNLEYLTLQ 210
Query: 189 -CSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QLSDDG 244
C K+TD + ++ KGL KL +LNL C ++ A + LS + SL+ LNL C +SD G
Sbjct: 211 DCQKLTDLSLKHISKGLAKLRVLNLSFCGGISDAGMIHLSHMTSLWSLNLRSCDNISDTG 270
Query: 245 CEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGLVNLT-GL 299
+ +G+L++ L++ F ++I D+ L ++ +GL L+SL+L SC I D+G+ + +
Sbjct: 271 IMHLA-MGTLRLSGLDMSFCDKIGDQSLAYIAQGLYQLKSLSLCSCHISDDGINRMVRQM 329
Query: 300 CNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNLD 356
L+ L + ++ GL ++ LT L I+L T I+ L ++ L LK LNL
Sbjct: 330 HELRTLNIGQCVRITDKGLELIADHLTQLTGIDLYGCTKITKRGLERITQLPCLKVLNLG 389
Query: 357 ARQITDT 363
Q+T++
Sbjct: 390 LWQMTES 396
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 142/286 (49%), Gaps = 33/286 (11%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEH 101
+ D + IA +L ++L G S++T++GL+ + L+SL+ C +SD G+ H
Sbjct: 130 ITDSSLGRIAQYLKNLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSDVGIGH 189
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLES 159
L G++ A G +NL L L+ C ++ L ++ KGL KL
Sbjct: 190 LAGMTR-----------------SAAEGCLNLEYLTLQDCQKLTDLSLKHISKGLAKLRV 232
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGCPVT 217
LN+ +C I+D+ M LS +T+L SL + SC ++D+GI +L G +L+ L++ C
Sbjct: 233 LNLSFCGGISDAGMIHLSHMTSLWSLNLRSCDNISDTGIMHLAMGTLRLSGLDMSFCDKI 292
Query: 218 AACLDSLSALGSLFY----LNLNRCQLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVH 271
SL+ + Y L+L C +SDDG + + + L+ LN+G ITD+ L
Sbjct: 293 GD--QSLAYIAQGLYQLKSLSLCSCHISDDGINRMVRQMHELRTLNIGQCVRITDKGLEL 350
Query: 272 LK-GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSS 315
+ LT L ++L C I GL +T L LK L L Q+ S
Sbjct: 351 IADHLTQLTGIDLYGCTKITKRGLERITQLPCLKVLNLGLWQMTES 396
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 93/197 (47%), Gaps = 39/197 (19%)
Query: 272 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 322
++G+ N+ESLNL C G+G + + L L C +++D+ +G R
Sbjct: 86 IQGMPNIESLNLSGCYNLTDNGLGHAFVQEIPSLRVLNLSLCKQITDSSLG----RIAQY 141
Query: 323 LTNLESINLS-FTGISDGSLRKLA-GLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL 379
L NLE + L + I++ L +A GL LKSLNL + R ++D G+ L
Sbjct: 142 LKNLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSDVGIGHL----------- 190
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT----GLVSLNVSN----SRITSAGL 431
A +T S A N + L +L+ C LTD L GL L V N I+ AG+
Sbjct: 191 --AGMTRSAAEGCLNLEYL-TLQDCQK-LTDLSLKHISKGLAKLRVLNLSFCGGISDAGM 246
Query: 432 RHLKPLKNLRSLTLESC 448
HL + +L SL L SC
Sbjct: 247 IHLSHMTSLWSLNLRSC 263
>gi|320166208|gb|EFW43107.1| tyrosine-protein kinase Src42A [Capsaspora owczarzaki ATCC 30864]
Length = 1869
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 167/383 (43%), Gaps = 37/383 (9%)
Query: 104 GLSNLTSLSFRR--NNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLES 159
G S LT+L+ R NN IT+ AF GL L LDL + T I G GL L
Sbjct: 678 GFSGLTALTDLRLFNNTITSILANAFTGLTKLTYLDLSLNQLTSIPAGA--FSGLTALTQ 735
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
L + + N ++ +GLT L L + +++T GL L L L G +T
Sbjct: 736 L-LLYNNWLSAVPSSAFTGLTALLYLYLYNNQITTVAANAFTGLTALVQLQLYGNQITTI 794
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
+ + + SL L L +++ F+ + L +L++ N+IT GLT +
Sbjct: 795 SASAFAGMSSLVQLYLYSNRITAIFVNAFTGLTHLSLLDISNNQITSLPANAFTGLTAMT 854
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL-------- 331
L+L + + TGL L+ L L + Q+ S + + LT L + L
Sbjct: 855 QLSLYNNSLSAVPSSAFTGLTALQALWLYNNQITSVVVNAFTSLTALVQLQLYGNQITTI 914
Query: 332 ---SFTGISDGSLRKL-------------AGLSSLKSLNLDARQITDTGLAALTSLTGLT 375
+F+G+S SL +L GL++L L L QIT +A T LT LT
Sbjct: 915 PASAFSGLSKLSLLQLNNNWLSAIPSSAFTGLTALTQLQLYNNQITTVPSSAFTGLTALT 974
Query: 376 HLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSA 429
L L+G +IT A+ L++L + +T AGLT L L++S S+ITS
Sbjct: 975 QLSLYGNQITTISASAFAGLTALQALYLNNNTITTIAANAFAGLTALNWLDLSGSQITSI 1034
Query: 430 GLRHLKPLKNLRSLTLESCKVTA 452
L L L L + ++A
Sbjct: 1035 PANVFSSLPALAQLNLYNNWLSA 1057
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 196/471 (41%), Gaps = 48/471 (10%)
Query: 17 SRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQG----SSLLSVDLSGSDVTDS 72
S +T +S AF L Y +N+ W+ I S ++L + L + +T
Sbjct: 68 SNQITSISSSAFTG-----LTALTYLQLNNNWLSAIPSSAFTGLTALTQLQLYNNQITTV 122
Query: 73 GLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLIN 132
+ LQ+L + + QI+ + GL+ L L + NN IT+ AF+GL
Sbjct: 123 PSSAFTGLTALQTL-YLYNNQIATVAINAFSGLTALVQL-YLYNNQITSISANAFSGLSK 180
Query: 133 LVKLDLER------CTRIHGGLVNLK------------------GLMKLESLNIKWCNCI 168
L L L + GL L GL L++L + + N I
Sbjct: 181 LNTLQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITTVPSSAFTGLTALQTLYL-YNNQI 239
Query: 169 TDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG 228
+ SGLT L L++ +++T GL KL L+L ++A + + L
Sbjct: 240 ATVAINAFSGLTALVQLRLDTNQITTVPANAFSGLSKLNTLHLYNNWLSAIPSSAFTGLT 299
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
+L L L+ Q++ F+ + +L+ L L N+I GL L+ L LD+ I
Sbjct: 300 ALTQLRLDTNQITTVPSSAFTGLTALQTLYLYNNQIITVATNAFSGLAALQVLRLDTNQI 359
Query: 289 GDEGLVNLTGLCNLKCLELSD---TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
+GL L L+LS+ + + SS L+ LT L+ N T + +
Sbjct: 360 TTVPANAFSGLSALNTLQLSNNWLSAIPSSAFTGLTALTQLQLYNNQITTVPSSAFT--- 416
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
GL++L++L L QI + A + LT L L L+ +IT A L +L++
Sbjct: 417 GLTALQTLYLYNNQIATVAINAFSGLTALVQLYLYNNQITSISANAFSGLSKLNTLQLNN 476
Query: 406 GGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
L+ GLT L L + N++IT+ L L+ L L + ++
Sbjct: 477 NWLSAIPSSAFTGLTALTQLLLYNNQITTVPSSAFTGLTALQFLYLYNNQI 527
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 151/344 (43%), Gaps = 12/344 (3%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVN 150
QI+ G+S+L L + +N ITA + AF GL +L LD+ + T +
Sbjct: 790 QITTISASAFAGMSSLVQL-YLYSNRITAIFVNAFTGLTHLSLLDISNNQITSLPANA-- 846
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
GL + L++ + N ++ +GLT L++L + +++T + L L L
Sbjct: 847 FTGLTAMTQLSL-YNNSLSAVPSSAFTGLTALQALWLYNNQITSVVVNAFTSLTALVQLQ 905
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
L G +T + S L L L LN LS F+ + +L L L N+IT
Sbjct: 906 LYGNQITTIPASAFSGLSKLSLLQLNNNWLSAIPSSAFTGLTALTQLQLYNNQITTVPSS 965
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
GLT L L+L I GL L+ L L++ + + +GLT L ++
Sbjct: 966 AFTGLTALTQLSLYGNQITTISASAFAGLTALQALYLNNNTITTIAANAFAGLTALNWLD 1025
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
LS + I+ + L +L LNL ++ +A T LT LT L ++G RIT A
Sbjct: 1026 LSGSQITSIPANVFSSLPALAQLNLYNNWLSAVPTSAFTGLTALTQLTMYGNRITTISAN 1085
Query: 391 YLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITS 428
L L + +T GL+ L L +SN++IT+
Sbjct: 1086 AFTGLNALVQLFLQSNQITTISASAFTGLSLLTQLYLSNNQITT 1129
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 157/368 (42%), Gaps = 35/368 (9%)
Query: 116 NNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
NN IT AF+GL LV+L L + T I L GL L L + + N IT
Sbjct: 620 NNQITTVPANAFSGLTALVQLQLYGNQITTIPSSA--LTGLSALTQL-LLYNNRITSVPA 676
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL---EGCPVTAACLDSLSALGSL 230
SGLT L L++ + +T GL KLT L+L + + A L+AL L
Sbjct: 677 NGFSGLTALTDLRLFNNTITSILANAFTGLTKLTYLDLSLNQLTSIPAGAFSGLTALTQL 736
Query: 231 FYLN---------------------LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
N L Q++ F+ + +L L L N+IT
Sbjct: 737 LLYNNWLSAVPSSAFTGLTALLYLYLYNNQITTVAANAFTGLTALVQLQLYGNQITTISA 796
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
G+++L L L S I + TGL +L L++S+ Q+ S +GLT + +
Sbjct: 797 SAFAGMSSLVQLYLYSNRITAIFVNAFTGLTHLSLLDISNNQITSLPANAFTGLTAMTQL 856
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGA 389
+L +S GL++L++L L QIT + A TSLT L L L+G +IT A
Sbjct: 857 SLYNNSLSAVPSSAFTGLTALQALWLYNNQITSVVVNAFTSLTALVQLQLYGNQITTIPA 916
Query: 390 AYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSL 443
+ L L++ L+ GLT L L + N++IT+ L L L
Sbjct: 917 SAFSGLSKLSLLQLNNNWLSAIPSSAFTGLTALTQLQLYNNQITTVPSSAFTGLTALTQL 976
Query: 444 TLESCKVT 451
+L ++T
Sbjct: 977 SLYGNQIT 984
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 146/347 (42%), Gaps = 10/347 (2%)
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
G+ T++ + +N IT+ AF GL L L L GL L L +
Sbjct: 56 GIPATTTILYLSSNQITSISSSAFTGLTALTYLQLNNNWLSAIPSSAFTGLTALTQLQL- 114
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
+ N IT +GLT L++L + +++ I GL L L L +T+ ++
Sbjct: 115 YNNQITTVPSSAFTGLTALQTLYLYNNQIATVAINAFSGLTALVQLYLYNNQITSISANA 174
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
S L L L LN LS F+ + +L L L N+IT GLT L++L L
Sbjct: 175 FSGLSKLNTLQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITTVPSSAFTGLTALQTLYL 234
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
+ I + +GL L L L Q+ + SGL+ L +++L +S
Sbjct: 235 YNNQIATVAINAFSGLTALVQLRLDTNQITTVPANAFSGLSKLNTLHLYNNWLSAIPSSA 294
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
GL++L L LD QIT +A T LT L L L+ +I L+ L +
Sbjct: 295 FTGLTALTQLRLDTNQITTVPSSAFTGLTALQTLYLYNNQIITVATNAFSGLAALQVLRL 354
Query: 404 CGGGLTD------AGLTGLVSLNVSN---SRITSAGLRHLKPLKNLR 441
+T +GL+ L +L +SN S I S+ L L L+
Sbjct: 355 DTNQITTVPANAFSGLSALNTLQLSNNWLSAIPSSAFTGLTALTQLQ 401
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 168/409 (41%), Gaps = 41/409 (10%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
S + S L + L+ LD N QI+ GL+ L +L + NN I A
Sbjct: 288 SAIPSSAFTGLTALTQLR-LDTN---QITTVPSSAFTGLTALQTL-YLYNNQIITVATNA 342
Query: 127 FAGL--INLVKLDLERCTRIHGGLVNLKGLMKLESLNIK--WCNCITDSDMKPLSGLTNL 182
F+GL + +++LD + T + GL L +L + W + I S L+ LT L
Sbjct: 343 FSGLAALQVLRLDTNQITTVPANA--FSGLSALNTLQLSNNWLSAIPSSAFTGLTALTQL 400
Query: 183 KSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN-------- 234
+ + V S L LQ L L N + V L+AL L+ N
Sbjct: 401 QLYNNQITTVPSSAFTGLTALQTLYLYNNQIATVAINAFSGLTALVQLYLYNNQITSISA 460
Query: 235 --------LNRCQLSDDG-----CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
LN QL+++ F+ + +L L L N+IT GLT L+ L
Sbjct: 461 NAFSGLSKLNTLQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITTVPSSAFTGLTALQFL 520
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 341
L + I + +GL L L L Q+ + SGL+ L +++L +S
Sbjct: 521 YLYNNQIATVAINAFSGLTALVQLRLDTNQITTVPANAFSGLSKLNTLHLYNNWLSAIPS 580
Query: 342 RKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
GL++L L LD QIT A + LT L +L L+ +IT A L L
Sbjct: 581 SAFTGLTALTQLRLDTNQITTVPANAFSGLTALLYLYLYNNQITTVPANAFSGLTALVQL 640
Query: 402 EICGGGLTD------AGLTGLVSLNVSNSRITSA---GLRHLKPLKNLR 441
++ G +T GL+ L L + N+RITS G L L +LR
Sbjct: 641 QLYGNQITTIPSSALTGLSALTQLLLYNNRITSVPANGFSGLTALTDLR 689
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 158/370 (42%), Gaps = 16/370 (4%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLV--KLDLERCTRIHGGLVN 150
QI+ GL+ L L + NN I + AF+GL LV +LD + T +
Sbjct: 502 QITTVPSSAFTGLTALQFL-YLYNNQIATVAINAFSGLTALVQLRLDTNQITTVPANA-- 558
Query: 151 LKGLMKLESLNI--KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTL 208
GL KL +L++ W + I S +GLT L L++ +++T GL L
Sbjct: 559 FSGLSKLNTLHLYNNWLSAIPSSA---FTGLTALTQLRLDTNQITTVPANAFSGLTALLY 615
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
L L +T ++ S L +L L L Q++ + + +L L L N IT
Sbjct: 616 LYLYNNQITTVPANAFSGLTALVQLQLYGNQITTIPSSALTGLSALTQLLLYNNRITSVP 675
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
GLT L L L + I TGL L L+LS Q+ S SGLT L
Sbjct: 676 ANGFSGLTALTDLRLFNNTITSILANAFTGLTKLTYLDLSLNQLTSIPAGAFSGLTALTQ 735
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG 388
+ L +S GL++L L L QIT A T LT L L L+G +IT
Sbjct: 736 LLLYNNWLSAVPSSAFTGLTALLYLYLYNNQITTVAANAFTGLTALVQLQLYGNQITTIS 795
Query: 389 AAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRS 442
A+ +L L + +T GLT L L++SN++ITS L +
Sbjct: 796 ASAFAGMSSLVQLYLYSNRITAIFVNAFTGLTHLSLLDISNNQITSLPANAFTGLTAMTQ 855
Query: 443 LTLESCKVTA 452
L+L + ++A
Sbjct: 856 LSLYNNSLSA 865
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 147/346 (42%), Gaps = 16/346 (4%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVN 150
QI+ GL+ L +L + NN I + AF+GL LV+L L + T I
Sbjct: 406 QITTVPSSAFTGLTALQTL-YLYNNQIATVAINAFSGLTALVQLYLYNNQITSISANA-- 462
Query: 151 LKGLMKLESL--NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTL 208
GL KL +L N W + I S +GLT L L + +++T + GL L
Sbjct: 463 FSGLSKLNTLQLNNNWLSAIPSSA---FTGLTALTQLLLYNNQITTVPSSAFTGLTALQF 519
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
L L + +++ S L +L L L+ Q++ FS + L L+L N ++
Sbjct: 520 LYLYNNQIATVAINAFSGLTALVQLRLDTNQITTVPANAFSGLSKLNTLHLYNNWLSAIP 579
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
GLT L L LD+ I +GL L L L + Q+ + SGLT L
Sbjct: 580 SSAFTGLTALTQLRLDTNQITTVPANAFSGLTALLYLYLYNNQITTVPANAFSGLTALVQ 639
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG 388
+ L I+ L GLS+L L L +IT + LT LT L LF IT
Sbjct: 640 LQLYGNQITTIPSSALTGLSALTQLLLYNNRITSVPANGFSGLTALTDLRLFNNTITSIL 699
Query: 389 AAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITS 428
A L L++ LT +GLT L L + N+ +++
Sbjct: 700 ANAFTGLTKLTYLDLSLNQLTSIPAGAFSGLTALTQLLLYNNWLSA 745
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 119/283 (42%), Gaps = 22/283 (7%)
Query: 15 VYSRCLTEVSLEAFRD-CALQDLCLGQYPGVNDKWMDVIASQGSSL---LSVDLSGSDVT 70
+Y+ L+ V AF ALQ L L N++ V+ + +SL + + L G+ +T
Sbjct: 858 LYNNSLSAVPSSAFTGLTALQALWL-----YNNQITSVVVNAFTSLTALVQLQLYGNQIT 912
Query: 71 D---SGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
S L S LQ L+ N+ I GL+ LT L NN IT AF
Sbjct: 913 TIPASAFSGLSKLSLLQ-LNNNWLSAIPSSAFT---GLTALTQLQLY-NNQITTVPSSAF 967
Query: 128 AGLINLVKLDL--ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
GL L +L L + T I GL L++L + N IT +GLT L L
Sbjct: 968 TGLTALTQLSLYGNQITTISASA--FAGLTALQALYLN-NNTITTIAANAFAGLTALNWL 1024
Query: 186 QISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGC 245
+S S++T L L LNL ++A + + L +L L + +++
Sbjct: 1025 DLSGSQITSIPANVFSSLPALAQLNLYNNWLSAVPTSAFTGLTALTQLTMYGNRITTISA 1084
Query: 246 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
F+ + +L L L N+IT GL+ L L L + I
Sbjct: 1085 NAFTGLNALVQLFLQSNQITTISASAFTGLSLLTQLYLSNNQI 1127
>gi|290980745|ref|XP_002673092.1| predicted protein [Naegleria gruberi]
gi|284086673|gb|EFC40348.1| predicted protein [Naegleria gruberi]
Length = 498
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 141/314 (44%), Gaps = 32/314 (10%)
Query: 176 LSGLTNLKSLQISC-SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L + LK L I S + SG Y+ L++LT L + C L +L SL YL
Sbjct: 100 LDSMKELKKLNIEYNSNIDPSGFKYICSLEQLTDLYMTFCYFRLPIAKHLPSLKSLTYLL 159
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG----- 289
+ + +G + ++ LK L++ N I E ++ GL L LN+ + I
Sbjct: 160 ITGNYIGVEGAKYIGEMKQLKQLHIANNNIGPEGAKYISGLEQLTFLNIRANEITVDGAK 219
Query: 290 -------------------DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
DEG ++G+ L L++S +G +G +++S + N+ +N
Sbjct: 220 FISEMKQLTVLNIIGNNICDEGAKFISGMKQLTNLDISVNNIGENGAKYVSEMMNITKLN 279
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
+ F I+DG ++ + L LN+++R I G+ ++S LTHL + I+ A
Sbjct: 280 IGFNSINDG-VKCFGEMKQLTDLNVNSRCIGSNGVEYISSFNQLTHLSIAKNLISLYEAM 338
Query: 391 YLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
++ KNL L+I + D G + L LNVS+ IT G++++ + NL L
Sbjct: 339 HISQMKNLIKLDISDNDIGDNGVQSISEMNQLTELNVSSIDITPIGIQYICKMDNLTYLI 398
Query: 445 LESCKVTANDIKRL 458
+ A K++
Sbjct: 399 SAHNNIGAKGAKQI 412
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 148/327 (45%), Gaps = 5/327 (1%)
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
G +++ + L L NN I +G K +GL L L++ G + + +L
Sbjct: 169 GAKYIGEMKQLKQLHIANNN-IGPEGAKYISGLEQLTFLNIRANEITVDGAKFISEMKQL 227
Query: 158 ESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
LNI N I D K +SG+ L +L IS + + ++G Y+ + +T LN+ G
Sbjct: 228 TVLNI-IGNNICDEGAKFISGMKQLTNLDISVNNIGENGAKYVSEMMNITKLNI-GFNSI 285
Query: 218 AACLDSLSALGSLFYLNLN-RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT 276
+ + L LN+N RC + +G E S L L++ N I+ +H+ +
Sbjct: 286 NDGVKCFGEMKQLTDLNVNSRC-IGSNGVEYISSFNQLTHLSIAKNLISLYEAMHISQMK 344
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
NL L++ IGD G+ +++ + L L +S + G++++ + NL + + I
Sbjct: 345 NLIKLDISDNDIGDNGVQSISEMNQLTELNVSSIDITPIGIQYICKMDNLTYLISAHNNI 404
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
++++ + L L++ + D G ++ + LT LD+ I D G +L K
Sbjct: 405 GAKGAKQISEMKHLAQLSIYHNAVGDEGAKFISEMEQLTFLDIGYNEIGDEGVKFLCGMK 464
Query: 397 NLRSLEICGGGLTDAGLTGLVSLNVSN 423
L L ++D G + +N+++
Sbjct: 465 QLTRLNTVDNNISDEGEKYIREMNLAD 491
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 131/288 (45%), Gaps = 3/288 (1%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
+I+ G + + + LT L+ NN I +G K +G+ L LD+ G +
Sbjct: 212 EITVDGAKFISEMKQLTVLNIIGNN-ICDEGAKFISGMKQLTNLDISVNNIGENGAKYVS 270
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
+M + LNI + N I D +K + L L ++ + +G+ Y+ +LT L++
Sbjct: 271 EMMNITKLNIGF-NSINDG-VKCFGEMKQLTDLNVNSRCIGSNGVEYISSFNQLTHLSIA 328
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
++ +S + +L L+++ + D+G + S++ L LN+ +IT + ++
Sbjct: 329 KNLISLYEAMHISQMKNLIKLDISDNDIGDNGVQSISEMNQLTELNVSSIDITPIGIQYI 388
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
+ NL L IG +G ++ + +L L + VG G + +S + L +++
Sbjct: 389 CKMDNLTYLISAHNNIGAKGAKQISEMKHLAQLSIYHNAVGDEGAKFISEMEQLTFLDIG 448
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
+ I D ++ L G+ L LN I+D G + + H+ ++
Sbjct: 449 YNEIGDEGVKFLCGMKQLTRLNTVDNNISDEGEKYIREMNLADHVGIY 496
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 124/268 (46%), Gaps = 6/268 (2%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L +++ G+++ D G + L +LD + I + G +++ + N+T L+
Sbjct: 222 SEMKQLTVLNIIGNNICDEGAKFISGMKQLTNLDISVN-NIGENGAKYVSEMMNITKLNI 280
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLE-RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
N+ G+K F + L L++ RC G+ + +L L+I N I+ +
Sbjct: 281 GFNS--INDGVKCFGEMKQLTDLNVNSRCIG-SNGVEYISSFNQLTHLSIAK-NLISLYE 336
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
+S + NL L IS + + D+G+ + + +LT LN+ +T + + + +L Y
Sbjct: 337 AMHISQMKNLIKLDISDNDIGDNGVQSISEMNQLTELNVSSIDITPIGIQYICKMDNLTY 396
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L + G ++ S++ L L++ N + DE + + L L++ IGDEG
Sbjct: 397 LISAHNNIGAKGAKQISEMKHLAQLSIYHNAVGDEGAKFISEMEQLTFLDIGYNEIGDEG 456
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHL 320
+ L G+ L L D + G +++
Sbjct: 457 VKFLCGMKQLTRLNTVDNNISDEGEKYI 484
>gi|357134265|ref|XP_003568738.1| PREDICTED: uncharacterized protein LOC100844673 [Brachypodium
distachyon]
Length = 547
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 175/414 (42%), Gaps = 54/414 (13%)
Query: 58 SLLSVDLSGSDVTDS-GLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
S+ +DLSG+ D+ L +L L+ L C +++ + L L +
Sbjct: 73 SVEEIDLSGNIAVDAEWLAYLGSFRYLRVLKLADCKNVNNSAVWALSDLGGIH------- 125
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+T + +++ L L LD+ + G LK +L LN+ W + + + PL
Sbjct: 126 --MTDKTLRSLQVLTRLEHLDIWGSEITNEGASVLKAFTRLSFLNVSWTHV---TRLPPL 180
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA-CLDSLSAL--GSLFYL 233
L +L + + D L+K T+ C + + S++ SL YL
Sbjct: 181 PNLQHLNMSNCTIHSIRDGDSEVNVPLEKFTV-----CAASFGNIFEVFSSIQGSSLLYL 235
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL-TNLESLNLDSCGIGDEG 292
+++ C LS+ F K+ ++ L+L F+ ITD + H+ + NL L+L + GI +
Sbjct: 236 DMSGCSLSN--LHIFEKMKHIEHLDLSFSRITDAAIQHVANIGMNLRHLSLKNTGITSQA 293
Query: 293 LVNLTG-LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD-----------GS 340
L G + NL L L+ T++ S L ++S + +L I+LS T I S
Sbjct: 294 PCILAGTVPNLSSLSLAYTEIDDSALAYISMMPSLRVIDLSHTSIKGFTCVEVNSEKIPS 353
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRS 400
+ L L L+SLNL+ ++D + L S + +L L ++D L + NL
Sbjct: 354 MPPLEHLMYLESLNLEDTALSDEVIPPLASFRAIKYLYLKSDFLSDPALHALSSASNLTH 413
Query: 401 LEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAND 454
L CG L+D+GL V P LR L L C + D
Sbjct: 414 LGFCGNILSDSGLLQFV------------------PPAKLRVLDLSGCWILTGD 449
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 179/442 (40%), Gaps = 81/442 (18%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIAS------- 54
LP ++ + L R L+ LE FR +++++ L V+ +W+ + S
Sbjct: 44 LPGQLADALLQRLAARRLLSPSLLEVFRH-SVEEIDLSGNIAVDAEWLAYLGSFRYLRVL 102
Query: 55 --------QGSSLLSV-DLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGL 105
S++ ++ DL G +TD L L+ + L+ LD + +I++ G L+
Sbjct: 103 KLADCKNVNNSAVWALSDLGGIHMTDKTLRSLQVLTRLEHLDI-WGSEITNEGASVLKAF 161
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-----GLVNLKGLMKLESL 160
+ L+ L+ ++ + L NL L++ CT IH VN + LE
Sbjct: 162 TRLSFLN------VSWTHVTRLPPLPNLQHLNMSNCT-IHSIRDGDSEVN----VPLEKF 210
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC 220
+ C + + S + L + S + S + + ++ + L+L +T A
Sbjct: 211 TV--CAASFGNIFEVFSSIQGSSLLYLDMSGCSLSNLHIFEKMKHIEHLDLSFSRITDAA 268
Query: 221 LDSLSALGSLFYLNLNRCQLSDDG------CEKFSKIGSLKVLNLGFNEITDECLVHLKG 274
+ ++ +G +NL L + G C + +L L+L + EI D L ++
Sbjct: 269 IQHVANIG----MNLRHLSLKNTGITSQAPCILAGTVPNLSSLSLAYTEIDDSALAYISM 324
Query: 275 LTNLESLNLDSCGI--------GDEGLVNLTGLCNLKCLE---LSDTQVGSSGLRHLSGL 323
+ +L ++L I E + ++ L +L LE L D
Sbjct: 325 MPSLRVIDLSHTSIKGFTCVEVNSEKIPSMPPLEHLMYLESLNLED-------------- 370
Query: 324 TNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGAR 383
T +SD + LA ++K L L + ++D L AL+S + LTHL G
Sbjct: 371 ----------TALSDEVIPPLASFRAIKYLYLKSDFLSDPALHALSSASNLTHLGFCGNI 420
Query: 384 ITDSGAAYLRNFKNLRSLEICG 405
++DSG LR L++ G
Sbjct: 421 LSDSGLLQFVPPAKLRVLDLSG 442
>gi|290991272|ref|XP_002678259.1| predicted protein [Naegleria gruberi]
gi|284091871|gb|EFC45515.1| predicted protein [Naegleria gruberi]
Length = 434
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 179/392 (45%), Gaps = 10/392 (2%)
Query: 83 LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT 142
L L+ N+ ++ D +E + L NLT L N I+ MK + L L KL + +
Sbjct: 47 LTELNVNWN-RLKDEDVESIGNLKNLTLLELS-GNEISKNSMKFISQLSELTKLSVGLNS 104
Query: 143 RIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKG 202
+ G+ ++ L KL LNI N IT +K + L+NL L IS + + G Y+
Sbjct: 105 IENEGINSIINLSKLTCLNIINAN-ITSEGVKLIGKLSNLTILDISGNLIGAEGGQYIGE 163
Query: 203 LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
L+ L L + S+ + L L L + ++G + S++ L L+LG N
Sbjct: 164 LKNLKTLVASDNELGVLGAKSIGEMNQLTSLCLIGNSIGNEGAKYISQLSQLTDLDLGKN 223
Query: 263 EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG 322
EI DE L L L +L+L S I D GL N CL++ ++ G+R++
Sbjct: 224 EIGDEGFKLLAKLEKLTNLDLVSNNISDLSSTGQLGLLN--CLDVRKNKIEDKGIRNICQ 281
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
L+ L+S+ L I+ + L+ + L +L++ I D G + LT L +LD+
Sbjct: 282 LSGLQSLRLCANPITSEGAKILSEMVQLTNLSISETHIDDEGAKFIAQLTTLKYLDISTK 341
Query: 383 RITDSGAAYLRNFKNLRSLEICGGGLTDAG---LTGLVSLNVSNSRITSAGLRHLKPLKN 439
RIT +G ++ L SL+I + D G ++ + L N+ + GL K L
Sbjct: 342 RITANGVKFICQLSKLISLDINWNNIGDEGVLYISRMQQLETLNAVYCNIGLEGAKLLSE 401
Query: 440 LRSLTLESCKVTANDIKRLQSRDLPNLVSFRP 471
+ LT+ K+ N I + L N+ F+
Sbjct: 402 MEQLTVLDVKI--NRIPGEGIQLLENIARFKS 431
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 139/314 (44%), Gaps = 28/314 (8%)
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
S++ S L L L ++ +++ D + + L+ LTLL L G ++ + +S L L
Sbjct: 36 SEIDKFSRLDQLTELNVNWNRLKDEDVESIGNLKNLTLLELSGNEISKNSMKFISQLSEL 95
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L++ + ++G + L LN+ IT E + + L+NL L++ IG
Sbjct: 96 TKLSVGLNSIENEGINSIINLSKLTCLNIINANITSEGVKLIGKLSNLTILDISGNLIGA 155
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
EG + L NLK L SD ++G G + + + L S+ L I + + ++ LS L
Sbjct: 156 EGGQYIGELKNLKTLVASDNELGVLGAKSIGEMNQLTSLCLIGNSIGNEGAKYISQLSQL 215
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFG----------------------ARITDSG 388
L+L +I D G L L LT+LDL +I D G
Sbjct: 216 TDLDLGKNEIGDEGFKLLAKLEKLTNLDLVSNNISDLSSTGQLGLLNCLDVRKNKIEDKG 275
Query: 389 AAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRS 442
+ L+SL +C +T G + L +L++S + I G + + L L+
Sbjct: 276 IRNICQLSGLQSLRLCANPITSEGAKILSEMVQLTNLSISETHIDDEGAKFIAQLTTLKY 335
Query: 443 LTLESCKVTANDIK 456
L + + ++TAN +K
Sbjct: 336 LDISTKRITANGVK 349
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 167/365 (45%), Gaps = 27/365 (7%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
++LSG++++ + + + S L L I + G+ + LS LT L+ N IT+
Sbjct: 74 LELSGNEISKNSMKFISQLSELTKLSVGLN-SIENEGINSIINLSKLTCLNIINAN-ITS 131
Query: 122 QGMKAFAGLINLVKLDLE------RCTRIHGGLVNLKGLM----KLESLNIKWC------ 165
+G+K L NL LD+ + G L NLK L+ +L L K
Sbjct: 132 EGVKLIGKLSNLTILDISGNLIGAEGGQYIGELKNLKTLVASDNELGVLGAKSIGEMNQL 191
Query: 166 -------NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
N I + K +S L+ L L + +++ D G L L+KLT NL+
Sbjct: 192 TSLCLIGNSIGNEGAKYISQLSQLTDLDLGKNEIGDEGFKLLAKLEKLT--NLDLVSNNI 249
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
+ L S LG L L++ + ++ D G ++ L+ L L N IT E L + L
Sbjct: 250 SDLSSTGQLGLLNCLDVRKNKIEDKGIRNICQLSGLQSLRLCANPITSEGAKILSEMVQL 309
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
+L++ I DEG + L LK L++S ++ ++G++ + L+ L S+++++ I D
Sbjct: 310 TNLSISETHIDDEGAKFIAQLTTLKYLDISTKRITANGVKFICQLSKLISLDINWNNIGD 369
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 398
+ ++ + L++LN I G L+ + LT LD+ RI G L N
Sbjct: 370 EGVLYISRMQQLETLNAVYCNIGLEGAKLLSEMEQLTVLDVKINRIPGEGIQLLENIARF 429
Query: 399 RSLEI 403
+SL +
Sbjct: 430 KSLVV 434
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 253 SLKVLNLGFNEITDECLVHLKGLTNLE-------------------SLNLDSCGIGDEGL 293
+L LN+ +N+I+++ + L G+ +L+ LN++ + DE +
Sbjct: 3 NLTYLNIDWNKISEKSKIILSGMKHLKILAASGSEIDKFSRLDQLTELNVNWNRLKDEDV 62
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
++ L NL LELS ++ + ++ +S L+ L +++ I + + + LS L L
Sbjct: 63 ESIGNLKNLTLLELSGNEISKNSMKFISQLSELTKLSVGLNSIENEGINSIINLSKLTCL 122
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
N+ IT G+ + L+ LT LD+ G I G Y+ KNL++L
Sbjct: 123 NIINANITSEGVKLIGKLSNLTILDISGNLIGAEGGQYIGELKNLKTL 170
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 11/176 (6%)
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
+ NL LN+D I ++ + L+G+ +LK L S +++ S L L +N+++
Sbjct: 1 MKNLTYLNIDWNKISEKSKIILSGMKHLKILAASGSEI-----DKFSRLDQLTELNVNWN 55
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
+ D + + L +L L L +I+ + ++ L+ LT L + I + G + N
Sbjct: 56 RLKDEDVESIGNLKNLTLLELSGNEISKNSMKFISQLSELTKLSVGLNSIENEGINSIIN 115
Query: 395 FKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
L L I +T G L+ L L++S + I + G +++ LKNL++L
Sbjct: 116 LSKLTCLNIINANITSEGVKLIGKLSNLTILDISGNLIGAEGGQYIGELKNLKTLV 171
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 5/228 (2%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
SQ S L +DL +++ D G L L +LD ISD L L L L
Sbjct: 210 SQLSQLTDLDLGKNEIGDEGFKLLAKLEKLTNLDL-VSNNISD--LSSTGQLGLLNCLDV 266
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
R+ N I +G++ L L L L G L +++L +L+I + I D
Sbjct: 267 RK-NKIEDKGIRNICQLSGLQSLRLCANPITSEGAKILSEMVQLTNLSISETH-IDDEGA 324
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K ++ LT LK L IS ++T +G+ ++ L KL L++ + + +S + L L
Sbjct: 325 KFIAQLTTLKYLDISTKRITANGVKFICQLSKLISLDINWNNIGDEGVLYISRMQQLETL 384
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
N C + +G + S++ L VL++ N I E + L+ + +SL
Sbjct: 385 NAVYCNIGLEGAKLLSEMEQLTVLDVKINRIPGEGIQLLENIARFKSL 432
>gi|427735495|ref|YP_007055039.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
gi|427370536|gb|AFY54492.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
Length = 396
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 165/307 (53%), Gaps = 30/307 (9%)
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
SD+KPLSGLTNL ++ + +K++D + L L LT LN+ G ++ + L++L +L
Sbjct: 84 SDLKPLSGLTNLTNIDLWGNKISD--VKPLVNLTNLTNLNIGGNKISD--VKPLASLTNL 139
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L+L ++SD + + +L L++ N+I+D + L+ L NL L + S I D
Sbjct: 140 TNLDLGGNKISD--VTPLASLTNLIRLDVYSNQISD--INSLENLNNLTFLRVGSNRIVD 195
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
+ NL L L + Q+ S +R LS L NL +NL ISD ++ +A L+SL
Sbjct: 196 --VKQFANFTNLTELWLEENQI--SDVRPLSSLNNLTKLNLMSNQISD--IKPIASLNSL 249
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
SL+LD QI+D + AL++LT LT L L +I + L N LR L + ++D
Sbjct: 250 NSLDLDKNQISD--IEALSNLTNLTTLGLDRNQIIN--IKPLSNLTKLRWLFLRQNQISD 305
Query: 411 ----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS-RDLPN 465
+ LT L L + +++I R +KPL NL L + +++N I +QS +L N
Sbjct: 306 IKPLSSLTNLRWLELKSNKI-----RDVKPLTNLAK--LRNLNLSSNQITNVQSLANLTN 358
Query: 466 LVSFRPE 472
LV+F E
Sbjct: 359 LVNFNVE 365
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 162/321 (50%), Gaps = 32/321 (9%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
SSL + L ++D L L +NL ++D + +ISD ++ L L+NLT+L+ N
Sbjct: 71 SSLTELRLLTKQISD--LKPLSGLTNLTNIDL-WGNKISD--VKPLVNLTNLTNLNIGGN 125
Query: 117 NAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
+K A L NL LDL + + + L +L L++L+ + N I SD+
Sbjct: 126 ---KISDVKPLASLTNLTNLDLGGNKISDV-TPLASLTNLIRLDV----YSNQI--SDIN 175
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L L NL L++ +++ D + LT L LE ++ + LS+L +L LN
Sbjct: 176 SLENLNNLTFLRVGSNRIVD--VKQFANFTNLTELWLEENQISD--VRPLSSLNNLTKLN 231
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
L Q+SD + + + SL L+L N+I+D + L LTNL +L LD I + +
Sbjct: 232 LMSNQISD--IKPIASLNSLNSLDLDKNQISD--IEALSNLTNLTTLGLDRNQIIN--IK 285
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
L+ L L+ L L Q+ S ++ LS LTNL + L I D ++ L L+ L++LN
Sbjct: 286 PLSNLTKLRWLFLRQNQI--SDIKPLSSLTNLRWLELKSNKIRD--VKPLTNLAKLRNLN 341
Query: 355 LDARQITDT-GLAALTSLTGL 374
L + QIT+ LA LT+L
Sbjct: 342 LSSNQITNVQSLANLTNLVNF 362
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 137/284 (48%), Gaps = 47/284 (16%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++DL G+ ++D + L +NL LD + QISD + L NL +L+F R
Sbjct: 137 TNLTNLDLGGNKISD--VTPLASLTNLIRLDV-YSNQISD-----INSLENLNNLTFLRV 188
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+ +K FA NL +L LE N I SD++PL
Sbjct: 189 GSNRIVDVKQFANFTNLTELWLEE-------------------------NQI--SDVRPL 221
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
S L NL L + ++++D I + L L L+L+ ++ +++LS L +L L L+
Sbjct: 222 SSLNNLTKLNLMSNQISD--IKPIASLNSLNSLDLDKNQISD--IEALSNLTNLTTLGLD 277
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
R Q+ + + S + L+ L L N+I+D + L LTNL L L S I D + L
Sbjct: 278 RNQIIN--IKPLSNLTKLRWLFLRQNQISD--IKPLSSLTNLRWLELKSNKIRD--VKPL 331
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
T L L+ L LS Q+ + ++ L+ LTNL + N+ I+ S
Sbjct: 332 TNLAKLRNLNLSSNQI--TNVQSLANLTNLVNFNVEENPINTKS 373
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 15/170 (8%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
QISD ++ + L++L SL +N ++A + L NL L L+R ++N+K
Sbjct: 236 QISD--IKPIASLNSLNSLDLDKN---QISDIEALSNLTNLTTLGLDR-----NQIINIK 285
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
L L L + SD+KPLS LTNL+ L++ +K+ D + L L KL LNL
Sbjct: 286 PLSNLTKLRWLFLRQNQISDIKPLSSLTNLRWLELKSNKIRD--VKPLTNLAKLRNLNLS 343
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCE-KFSKIGSLKVLNLGF 261
+T + SL+ L +L N+ ++ C + +K GS K+ + F
Sbjct: 344 SNQITN--VQSLANLTNLVNFNVEENPINTKSCPGRSTKCGSTKLKHRTF 391
>gi|290983152|ref|XP_002674293.1| predicted protein [Naegleria gruberi]
gi|284087882|gb|EFC41549.1| predicted protein [Naegleria gruberi]
Length = 338
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 118/223 (52%), Gaps = 2/223 (0%)
Query: 160 LNIKWCNCITDSDMKP--LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
+N+K+ + DS KP ++ + L SL IS +++ D G+ ++ +++L L + +
Sbjct: 112 VNVKFSKRLFDSIEKPTFITEMKQLTSLDISNNRIGDEGVKFISEMKQLISLGIYNNGIG 171
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 277
+ S+ + L L + Q+ D+G + S++ L L++ N+ DE + + +
Sbjct: 172 DEGVKSIIEMKRLTSLGIGGNQIGDEGAKSISEMKQLTSLDINNNQTGDEGVKFICEMKQ 231
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
L SL + + IGDEG +++ + L L +S+ ++G G +S L L S+++ + I
Sbjct: 232 LTSLTIYNNRIGDEGAKSISEMKQLTSLNISENRIGDEGAIFISELKQLTSLDICYNRIG 291
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
D + + + LKSL++ QI D G+ ++ +T LT LD+F
Sbjct: 292 DKEAKFICEMKQLKSLDIGGNQIGDEGVKFISEMTRLTSLDIF 334
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 104/204 (50%), Gaps = 6/204 (2%)
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
++ + L L+++ ++ D+G + S++ L L + N I DE + + + L SL +
Sbjct: 130 ITEMKQLTSLDISNNRIGDEGVKFISEMKQLISLGIYNNGIGDEGVKSIIEMKRLTSLGI 189
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
IGDEG +++ + L L++++ Q G G++ + + L S+ + I D +
Sbjct: 190 GGNQIGDEGAKSISEMKQLTSLDINNNQTGDEGVKFICEMKQLTSLTIYNNRIGDEGAKS 249
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
++ + L SLN+ +I D G ++ L LT LD+ RI D A ++ K L+SL+I
Sbjct: 250 ISEMKQLTSLNISENRIGDEGAIFISELKQLTSLDICYNRIGDKEAKFICEMKQLKSLDI 309
Query: 404 CGGGLTDAG------LTGLVSLNV 421
G + D G +T L SL++
Sbjct: 310 GGNQIGDEGVKFISEMTRLTSLDI 333
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 91/179 (50%), Gaps = 5/179 (2%)
Query: 34 QDLCLGQYP-GVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI 92
Q + LG Y G+ D+ + I + L S+ + G+ + D G + + L SLD N
Sbjct: 159 QLISLGIYNNGIGDEGVKSII-EMKRLTSLGIGGNQIGDEGAKSISEMKQLTSLDINNN- 216
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
Q D G++ + + LTSL+ NN I +G K+ + + L L++ G + +
Sbjct: 217 QTGDEGVKFICEMKQLTSLTI-YNNRIGDEGAKSISEMKQLTSLNISENRIGDEGAIFIS 275
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
L +L SL+I + N I D + K + + LKSL I +++ D G+ ++ + +LT L++
Sbjct: 276 ELKQLTSLDICY-NRIGDKEAKFICEMKQLKSLDIGGNQIGDEGVKFISEMTRLTSLDI 333
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 27/230 (11%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
++ L S+D+S + + D G+ + + L SL + I D G++ + + LTSL
Sbjct: 131 TEMKQLTSLDISNNRIGDEGVKFISEMKQLISLGI-YNNGIGDEGVKSIIEMKRLTSLGI 189
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
N I +G K+ + + L LD+ G+ + + +L SL I + N I D
Sbjct: 190 -GGNQIGDEGAKSISEMKQLTSLDINNNQTGDEGVKFICEMKQLTSLTI-YNNRIGDEGA 247
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K +S + L SL IS +++ D G ++ L++LT L++ C + + + F
Sbjct: 248 KSISEMKQLTSLNISENRIGDEGAIFISELKQLTSLDI--------CYNRIGDKEAKFI- 298
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
CE + LK L++G N+I DE + + +T L SL++
Sbjct: 299 -----------CE----MKQLKSLDIGGNQIGDEGVKFISEMTRLTSLDI 333
>gi|46447550|ref|YP_008915.1| hypothetical protein pc1916 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401191|emb|CAF24640.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 310
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 123/226 (54%), Gaps = 16/226 (7%)
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLEL 307
KI L LN + +T+ L+ LK NL++L L++C + D+GL +LT L L+ L+L
Sbjct: 76 KKIEGLNFLNQAY--LTNAHLLALKDCKNLKALYLEACQALTDDGLEHLTLLTALQHLDL 133
Query: 308 SD-TQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNL-DARQITDTG 364
S + +GL HL+ L L+ + L + ++D L L L++L+ L+L D +TD G
Sbjct: 134 SGCWNLTDAGLVHLTPLVGLQHLKLNACYNLTDDGLVHLTPLTALQHLDLSDCMNLTDAG 193
Query: 365 LAALTSLTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEICG-GGLTDAGL------TGL 416
LA L LT L HL L +TD+G A+L L+ L + LTD GL T L
Sbjct: 194 LAHLKPLTALQHLGLSCCENLTDAGLAHLAPLTGLQYLALSDCMNLTDDGLVHLKPLTAL 253
Query: 417 VSLNVSNSR-ITSAGLRHLKPLKNLRSLTLESC-KVTANDIKRLQS 460
LN+ N R +T AGL HL PLK L+ L L C KVT + R ++
Sbjct: 254 QHLNLRNCRNVTDAGLAHLTPLKALQQLNLRRCDKVTNTGLARFKT 299
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
L+ + +T++ L+ LKDC NL++L C ++D GLEHL L+ L L
Sbjct: 84 LNQAYLTNAHLLALKDCKNLKALYLEACQALTDDGLEHLTLLTALQHLD----------- 132
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+G NL GLV+L L+ L+ L + C +TD + L+ LT L+
Sbjct: 133 ---LSGCWNLTD----------AGLVHLTPLVGLQHLKLNACYNLTDDGLVHLTPLTALQ 179
Query: 184 SLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQ-L 240
L +S C +TD+G+A+LK L L L L C +T A L L+ L L YL L+ C L
Sbjct: 180 HLDLSDCMNLTDAGLAHLKPLTALQHLGLSCCENLTDAGLAHLAPLTGLQYLALSDCMNL 239
Query: 241 SDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
+DDG + +L+ LNL +TD L HL L L+ LNL C V TGL
Sbjct: 240 TDDGLVHLKPLTALQHLNLRNCRNVTDAGLAHLTPLKALQQLNLRRCDK-----VTNTGL 294
Query: 300 CNLKCLELS 308
K L S
Sbjct: 295 ARFKTLAAS 303
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
++TD+GL HL + LQ L + C+ ++D GL HL+ L+ L L+ R +T G+
Sbjct: 212 ENLTDAGLAHLAPLTGLQYLALSDCMNLTDDGLVHLKPLTALQHLNLRNCRNVTDAGLAH 271
Query: 127 FAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCN 166
L L +L+L RC ++ + GL K L SLN++ N
Sbjct: 272 LTPLKALQQLNLRRCDKVTNTGLARFKTLAA--SLNLRIIN 310
>gi|18568223|gb|AAL75966.1|AF467462_1 PpaB [Danio rerio]
Length = 392
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 165/312 (52%), Gaps = 32/312 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + +LS RR+ + QGM N+ L+L C + G ++ + L
Sbjct: 66 RGIRRVQTLSLRRSLSYVIQGMP------NIESLNLSGCYNLTDNGLGHAFVQEIPSLRV 119
Query: 160 LNIKWCNCITDSDMKPLSG-LTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGC-P 215
LN+ C ITDS + ++ L NL+ L++ CS +T++G+ + GL +L LNL C
Sbjct: 120 LNLSLCKQITDSSLGRIAQYLKNLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCRH 179
Query: 216 VTAACLDSLSALG--------SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-NEI 264
V+ + L+ + SL YL L CQ L+D + SK + LKVLNL F I
Sbjct: 180 VSDVGIGHLAGMTRSAAEGCLSLEYLTLQDCQKLTDLSLKHISKGLTKLKVLNLSFCGGI 239
Query: 265 TDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRHLS 321
+D ++HL +T+L SLNL SC I D G+++L G L L++S ++G L ++
Sbjct: 240 SDAGMIHLSHMTSLWSLNLRSCDNISDTGIMHLAMGTLRLSGLDVSFCDKIGDQSLACIA 299
Query: 322 -GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALT-SLTGLTHL 377
GL L+S++L ISD + R + + L++LN+ +ITD GL + LT LT +
Sbjct: 300 QGLYQLKSLSLCSCHISDDGINRMVRQMHELRTLNIGQCVRITDKGLELIADHLTQLTGI 359
Query: 378 DLFG-ARITDSG 388
DL+G +IT G
Sbjct: 360 DLYGCTKITKRG 371
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 141/283 (49%), Gaps = 33/283 (11%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEH 101
+ D + IA +L ++L G S++T++GL+ + L+SL+ C +SD G+ H
Sbjct: 128 ITDSSLGRIAQYLKNLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSDVGIGH 187
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLES 159
L G++ A G ++L L L+ C ++ L ++ KGL KL+
Sbjct: 188 LAGMTR-----------------SAAEGCLSLEYLTLQDCQKLTDLSLKHISKGLTKLKV 230
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGCPVT 217
LN+ +C I+D+ M LS +T+L SL + SC ++D+GI +L G +L+ L++ C
Sbjct: 231 LNLSFCGGISDAGMIHLSHMTSLWSLNLRSCDNISDTGIMHLAMGTLRLSGLDVSFCDKI 290
Query: 218 A----ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVH 271
AC+ L L L+L C +SDDG + + + L+ LN+G ITD+ L
Sbjct: 291 GDQSLACIA--QGLYQLKSLSLCSCHISDDGINRMVRQMHELRTLNIGQCVRITDKGLEL 348
Query: 272 LK-GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQV 312
+ LT L ++L C I GL +T L LK L Q+
Sbjct: 349 IADHLTQLTGIDLYGCTKITKRGLERITQLPCLKVFNLGLWQM 391
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 92/197 (46%), Gaps = 39/197 (19%)
Query: 272 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 322
++G+ N+ESLNL C G+G + + L L C +++D+ +G R
Sbjct: 84 IQGMPNIESLNLSGCYNLTDNGLGHAFVQEIPSLRVLNLSLCKQITDSSLG----RIAQY 139
Query: 323 LTNLESINLS-FTGISDGSLRKLA-GLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL 379
L NLE + L + I++ L +A GL LKSLNL + R ++D G+ L +T
Sbjct: 140 LKNLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSDVGIGHLAGMT------- 192
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTD-------AGLTGLVSLNVSN-SRITSAGL 431
R G L +L+ C LTD GLT L LN+S I+ AG+
Sbjct: 193 ---RSAAEGCLSLEYL----TLQDCQK-LTDLSLKHISKGLTKLKVLNLSFCGGISDAGM 244
Query: 432 RHLKPLKNLRSLTLESC 448
HL + +L SL L SC
Sbjct: 245 IHLSHMTSLWSLNLRSC 261
>gi|209154162|gb|ACI33313.1| F-box/LRR-repeat protein 14 [Salmo salar]
Length = 403
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 170/329 (51%), Gaps = 32/329 (9%)
Query: 101 HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKL 157
H RG+ + LS RR+ + QGM N+ L+L C + G ++ + L
Sbjct: 69 HTRGIKKVQILSLRRSLSYVIQGMP------NIESLNLCGCFNLTDNGLGHAFVQDIPSL 122
Query: 158 ESLNIKWCNCITDSDMKPLSG-LTNLKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ L NL+ L++ S +T++G+ + GL KL LNL C
Sbjct: 123 RILNLSLCKPITDSSLGRIAQYLKNLEVLELGGLSNITNTGLLLIAWGLHKLKSLNLRSC 182
Query: 215 PVTA-------ACLDSLSALGSLF--YLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A + +A G LF L L CQ L+D + SK + +LKVLNL F
Sbjct: 183 RHVSDVGIGHLAGMTRSAAEGCLFLEQLTLQDCQKLTDLSLKHVSKGLANLKVLNLSFCG 242
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRH 319
I+D ++HL +T+L SLNL SC I D G+++L G L L++S ++G L +
Sbjct: 243 GISDSGMIHLSNMTHLWSLNLRSCDNISDTGIMHLAMGSLQLSGLDVSFCDKIGDQSLAY 302
Query: 320 LS-GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALT-SLTGLT 375
++ GL L+S++L ISD + R + + LK+LN+ +ITD GL + LT LT
Sbjct: 303 IAQGLYQLKSLSLCSCHISDDGINRMVRQMHELKTLNIGQCVRITDKGLELIADHLTQLT 362
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEI 403
+DL+G +IT G + L+ L +
Sbjct: 363 GIDLYGCTKITKRGLERITQLPCLKVLNL 391
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 163/314 (51%), Gaps = 40/314 (12%)
Query: 82 NLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLI-NLVKLDL 138
N++SL+ C ++D GL H ++ + +L L+ IT + A + NL L+L
Sbjct: 94 NIESLNLCGCFNLTDNGLGHAFVQDIPSLRILNLSLCKPITDSSLGRIAQYLKNLEVLEL 153
Query: 139 ERCTRIHGGLVNLK---------GLMKLESLNIKWCNCITDSDMKPLSGLTN-------- 181
GGL N+ GL KL+SLN++ C ++D + L+G+T
Sbjct: 154 -------GGLSNITNTGLLLIAWGLHKLKSLNLRSCRHVSDVGIGHLAGMTRSAAEGCLF 206
Query: 182 LKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC 238
L+ L + C K+TD + ++ KGL L +LNL C ++ + + LS + L+ LNL C
Sbjct: 207 LEQLTLQDCQKLTDLSLKHVSKGLANLKVLNLSFCGGISDSGMIHLSNMTHLWSLNLRSC 266
Query: 239 -QLSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL 293
+SD G + +GSL++ L++ F ++I D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 267 DNISDTGIMHLA-MGSLQLSGLDVSFCDKIGDQSLAYIAQGLYQLKSLSLCSCHISDDGI 325
Query: 294 VNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKLAGLSS 349
+ + LK L + ++ GL ++ LT L I+L T I+ L ++ L
Sbjct: 326 NRMVRQMHELKTLNIGQCVRITDKGLELIADHLTQLTGIDLYGCTKITKRGLERITQLPC 385
Query: 350 LKSLNLDARQITDT 363
LK LNL Q+T++
Sbjct: 386 LKVLNLGLWQMTES 399
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 141/290 (48%), Gaps = 41/290 (14%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEH 101
+ D + IA +L ++L G S++T++GL+ + L+SL+ C +SD G+ H
Sbjct: 133 ITDSSLGRIAQYLKNLEVLELGGLSNITNTGLLLIAWGLHKLKSLNLRSCRHVSDVGIGH 192
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL------KGLM 155
L G++ A G + L +L L+ C + L +L KGL
Sbjct: 193 LAGMTR-----------------SAAEGCLFLEQLTLQDCQK----LTDLSLKHVSKGLA 231
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEG 213
L+ LN+ +C I+DS M LS +T+L SL + SC ++D+GI +L G +L+ L++
Sbjct: 232 NLKVLNLSFCGGISDSGMIHLSNMTHLWSLNLRSCDNISDTGIMHLAMGSLQLSGLDVSF 291
Query: 214 CPVTAACLDSLSALGSLFY----LNLNRCQLSDDGCEKFSK-IGSLKVLNLG-FNEITDE 267
C SL+ + Y L+L C +SDDG + + + LK LN+G ITD+
Sbjct: 292 CDKIGD--QSLAYIAQGLYQLKSLSLCSCHISDDGINRMVRQMHELKTLNIGQCVRITDK 349
Query: 268 CLVHLK-GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSS 315
L + LT L ++L C I GL +T L LK L L Q+ S
Sbjct: 350 GLELIADHLTQLTGIDLYGCTKITKRGLERITQLPCLKVLNLGLWQMTES 399
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 39/197 (19%)
Query: 272 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 322
++G+ N+ESLNL C G+G + ++ L L C ++D+ +G R
Sbjct: 89 IQGMPNIESLNLCGCFNLTDNGLGHAFVQDIPSLRILNLSLCKPITDSSLG----RIAQY 144
Query: 323 LTNLESINLS-FTGISDGSLRKLA-GLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL 379
L NLE + L + I++ L +A GL LKSLNL + R ++D G+ L +T
Sbjct: 145 LKNLEVLELGGLSNITNTGLLLIAWGLHKLKSLNLRSCRHVSDVGIGHLAGMT------- 197
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT----GLVSLNVSN----SRITSAGL 431
R G +L +L+ C LTD L GL +L V N I+ +G+
Sbjct: 198 ---RSAAEGCLFLEQL----TLQDCQK-LTDLSLKHVSKGLANLKVLNLSFCGGISDSGM 249
Query: 432 RHLKPLKNLRSLTLESC 448
HL + +L SL L SC
Sbjct: 250 IHLSNMTHLWSLNLRSC 266
>gi|359464005|ref|ZP_09252568.1| internalin A protein [Acaryochloris sp. CCMEE 5410]
Length = 624
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 139/490 (28%), Positives = 225/490 (45%), Gaps = 92/490 (18%)
Query: 23 VSLEAFRDCALQDLCLGQYPGVNDKWM-DVIASQGSSLLS------VDLSGSDVTDSGLI 75
+SL+ L D + QYP ++ ++ D+++ + S + LSG DVT +
Sbjct: 55 LSLQGVDGHELVDASIEQYPHLSALYLFDIVSPEIVPFASLPGLSTIALSGQDVTATS-- 112
Query: 76 HLKDCSNLQSL--------DFNFCI-------------QISDGGLEHLRGLSNLTSLSFR 114
+L+ +NL ++ D++F QI+D + ++ L LTSL
Sbjct: 113 YLQQATNLTTVYLKTTHISDYSFLSDLKNLTHLDLSNNQIAD--ISFIQDLKQLTSLGLA 170
Query: 115 RNNAITAQGMKA----------------FAGLINLVKL-DLERCTRIHGGLVNLKGLMKL 157
N + G+K ++ L+N +L L R GL L+ L L
Sbjct: 171 ANKIVDISGLKDLTTLNSLNLRSNAIDDYSVLLNFKELSQLTVSVREATGLAFLQDLRGL 230
Query: 158 ESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
L++ + + I SD+ L L L L + ++++D IA L L +LT L+L ++
Sbjct: 231 TYLDLSYNHWI--SDISVLRHLPKLTHLDLGSNQISD--IAVLSDLPQLTHLSLSANKIS 286
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 277
L L L L L+++ +++D + L L++ N+++D + L+ LT
Sbjct: 287 D--LSVLQTLQGLESLDISANEIADIAI--LQNLQGLTQLDISSNDVSD--ISALQDLTT 340
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
L LN+ S + D + L GL L L++SD Q+ S + L GL L S+NLS+ +S
Sbjct: 341 LTQLNVSSNEVIDYSV--LQGLTELTNLDVSDNQL--SEISDLQGLHALTSLNLSYNQLS 396
Query: 338 DGS----LRKLAGLS----------------SLKSLNLDARQITDTGLAALTSLTGLTHL 377
D S L++LA L+ L +LNL QITD L+ L L GLT L
Sbjct: 397 DISVLQDLKQLATLNLSYNPVSDIAVLQNFKDLTTLNLSFTQITD--LSTLQGLKGLTSL 454
Query: 378 DLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG----LTGLVSLNVSNSRITS-AGLR 432
DL +I D A L++ K L L + L+D L GL SLN+S ++I+ A L+
Sbjct: 455 DLHSNQIRDISA--LQDLKGLYRLNVSDNQLSDISALRNLKGLFSLNLSINQISDIAALQ 512
Query: 433 HLKPLKNLRS 442
L L +L +
Sbjct: 513 DLTRLTSLNA 522
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 154/330 (46%), Gaps = 42/330 (12%)
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
S+D+S +++ D + L++ L LD + +SD + L+ L+ LT L+ N I
Sbjct: 299 SLDISANEIADIAI--LQNLQGLTQLDIS-SNDVSD--ISALQDLTTLTQLNVSSNEVI- 352
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
GL L LD+ + +L+GL L SLN+ + SD+ L L
Sbjct: 353 --DYSVLQGLTELTNLDVSDNQL--SEISDLQGLHALTSLNLSYNQL---SDISVLQDLK 405
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
L +L +S + V+D IA L+ + LT LNL +T L +L L L L+L+ Q+
Sbjct: 406 QLATLNLSYNPVSD--IAVLQNFKDLTTLNLSFTQITD--LSTLQGLKGLTSLDLHSNQI 461
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITD-ECLVHLKGLTNLESLNLDSCGIGD-EGLVNLTG 298
D + L LN+ N+++D L +LKGL SLNL I D L +LT
Sbjct: 462 RD--ISALQDLKGLYRLNVSDNQLSDISALRNLKGLF---SLNLSINQISDIAALQDLTR 516
Query: 299 LCNLKCLE--LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS-LRKLAGLSSLKSLNL 355
L +L LSD V L GLT L S++L I+D S L+ + GL S L
Sbjct: 517 LTSLNASHNRLSDISV-------LQGLTRLNSLDLGANQIADISVLQNIPGLFS-----L 564
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARIT 385
D R + ++ GLT L+L +I+
Sbjct: 565 DLRF---SDVSVFQDFKGLTSLNLSSNQIS 591
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 47/275 (17%)
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
L+L ++G + A ++ L +L+ ++ ++ F+ + L + L ++T
Sbjct: 55 LSLQGVDGHELVDASIEQYPHLSALYLFDIVSPEIV-----PFASLPGLSTIALSGQDVT 109
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
+L+ TNL ++ L + I D L+ L NL L+LS+ Q+ + + L
Sbjct: 110 --ATSYLQQATNLTTVYLKTTHISDYSF--LSDLKNLTHLDLSNNQIA--DISFIQDLKQ 163
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD--------------------TGL 365
L S+ L+ I D + L L++L SLNL + I D TGL
Sbjct: 164 LTSLGLAANKIVD--ISGLKDLTTLNSLNLRSNAIDDYSVLLNFKELSQLTVSVREATGL 221
Query: 366 AALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLN 420
A L L GLT+LDL + I+D + LR+ L L++ ++D + L L L+
Sbjct: 222 AFLQDLRGLTYLDLSYNHWISD--ISVLRHLPKLTHLDLGSNQISDIAVLSDLPQLTHLS 279
Query: 421 VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 455
+S ++I+ L L+ L+ LES ++AN+I
Sbjct: 280 LSANKISD-----LSVLQTLQG--LESLDISANEI 307
>gi|290972583|ref|XP_002669031.1| predicted protein [Naegleria gruberi]
gi|284082572|gb|EFC36287.1| predicted protein [Naegleria gruberi]
Length = 369
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 163/356 (45%), Gaps = 13/356 (3%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
+E + + LT L N I M+ + L +LD+ERC G+ L + +L
Sbjct: 18 IEAISEMRQLTKLGI---NGIQDNDMRQIGMMSQLTELDIERCDISGEGIKFLIVMPQLT 74
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
SLN + N + D K +S ++ L L I+ +++ G Y+ L +LT L++ + +
Sbjct: 75 SLNGGY-NYLQCGDAKLISEMSKLTKLDINTNEIGTEGAKYISTLNQLTELDIGNNNILS 133
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
+ L +L LN+ R + D+G S++ L L++GFN E + + L +L
Sbjct: 134 EGAKFIRNLKNLVKLNVERNNIGDEGANYISEMKQLTALDIGFNMFGFEGIKAISQLNHL 193
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT--QVGSSGLRHL-SGLTNLESINLSFTG 335
L++ I G+ +T NL L L + + L L S + L ++++
Sbjct: 194 IELSIQGNEITINGVKLITEKKNLTSLNLGNIFYDTKTPELSQLVSQMHQLTTLDIENNN 253
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF 395
I LA + +LK LN+ I GL+ +T LT LT L++ G +I D GA + +
Sbjct: 254 IGPEVANLLAEMKNLKHLNIAFNNIEKEGLSHITQLTQLTSLNVCGNQIDDEGAKIVSSM 313
Query: 396 KNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
K L L I L + G + L L +S++RI + + KNLR + +
Sbjct: 314 KQLLKLNIEENFLNEGGCETIIEMPQLTQLYISSNRIGEKQVEMICGKKNLRDIRI 369
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 137/313 (43%), Gaps = 37/313 (11%)
Query: 169 TDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA--------- 219
T S ++ +S + L L I+ + D+ + + + +LT L++E C ++
Sbjct: 14 TSSSIEAISEMRQLTKLGING--IQDNDMRQIGMMSQLTELDIERCDISGEGIKFLIVMP 71
Query: 220 -------------CLDS--LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI 264
C D+ +S + L L++N ++ +G + S + L L++G N I
Sbjct: 72 QLTSLNGGYNYLQCGDAKLISEMSKLTKLDINTNEIGTEGAKYISTLNQLTELDIGNNNI 131
Query: 265 TDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLT 324
E ++ L NL LN++ IGDEG ++ + L L++ G G++ +S L
Sbjct: 132 LSEGAKFIRNLKNLVKLNVERNNIGDEGANYISEMKQLTALDIGFNMFGFEGIKAISQLN 191
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG----LTHLDLF 380
+L +++ I+ ++ + +L SLNL DT L+ L LT LD+
Sbjct: 192 HLIELSIQGNEITINGVKLITEKKNLTSLNL-GNIFYDTKTPELSQLVSQMHQLTTLDIE 250
Query: 381 GARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHL 434
I A L KNL+ L I + G LT L SLNV ++I G + +
Sbjct: 251 NNNIGPEVANLLAEMKNLKHLNIAFNNIEKEGLSHITQLTQLTSLNVCGNQIDDEGAKIV 310
Query: 435 KPLKNLRSLTLES 447
+K L L +E
Sbjct: 311 SSMKQLLKLNIEE 323
>gi|290972542|ref|XP_002669011.1| predicted protein [Naegleria gruberi]
gi|284082551|gb|EFC36267.1| predicted protein [Naegleria gruberi]
Length = 335
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 157/323 (48%), Gaps = 12/323 (3%)
Query: 96 DGGLEHLRGLSNLTSLSFR--RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG 153
D LE + +SN + L+ ++ +T Q A L NL L + RC+ G N+
Sbjct: 3 DCNLETINEISNHSKLTELCINSSELTPQSAHLIAKLSNLTNLSINRCSIADLGTNNISQ 62
Query: 154 LMKLESLNIKWC-NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
L +++ L + C N I + + + NL L++S +++ D G+ + L KL L+L
Sbjct: 63 LKQIKYL--RACENGIGSIGARNIGEMKNLTLLELSGNRIGDDGLESIGKLSKLAYLDLG 120
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF--NEITDECLV 270
+T L SL+ L L LNL ++++ I LK+ NL N+I +E
Sbjct: 121 ENEITDQGLKSLNNLEKLVTLNLKNNKITN-----LETISHLKLTNLDVTTNKIGNEGAK 175
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
++ + L+ L ++ I +G L+G+ L C+ L D +G G + L NLE ++
Sbjct: 176 YIAEMKRLKVLRINDNHITSDGAKILSGMTQLTCIFLCDNLIGDEGALSIGLLYNLEYLD 235
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
L GI+ L+ + L +L+ L++ QI+D G ++ + LT L++ I GA
Sbjct: 236 LKGAGITGEGLKTICELINLRRLHVSHNQISDLGAKYISGMNNLTALNVCDCNIGFEGAQ 295
Query: 391 YLRNFKNLRSLEICGGGLTDAGL 413
++ N ++L L+I LT G+
Sbjct: 296 FISNMQSLADLDITKNNLTTNGI 318
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 139/293 (47%), Gaps = 14/293 (4%)
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
CN T +++ S LT L I+ S++T + L LT L++ C + +++
Sbjct: 4 CNLETINEISNHSKLT---ELCINSSELTPQSAHLIAKLSNLTNLSINRCSIADLGTNNI 60
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
S L + YL + G ++ +L +L L N I D+ L + L+ L L+L
Sbjct: 61 SQLKQIKYLRACENGIGSIGARNIGEMKNLTLLELSGNRIGDDGLESIGKLSKLAYLDLG 120
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGS-SGLRHLSGLTNLESINLSFTGISDGSLRK 343
I D+GL +L L L L L + ++ + + HL LTNL+ ++ I + +
Sbjct: 121 ENEITDQGLKSLNNLEKLVTLNLKNNKITNLETISHLK-LTNLD---VTTNKIGNEGAKY 176
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
+A + LK L ++ IT G L+ +T LT + L I D GA + NL L++
Sbjct: 177 IAEMKRLKVLRINDNHITSDGAKILSGMTQLTCIFLCDNLIGDEGALSIGLLYNLEYLDL 236
Query: 404 CGGGLTDAGLT------GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
G G+T GL L L+VS+++I+ G +++ + NL +L + C +
Sbjct: 237 KGAGITGEGLKTICELINLRRLHVSHNQISDLGAKYISGMNNLTALNVCDCNI 289
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 27/223 (12%)
Query: 263 EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG 322
E+T + + L+NL +L+++ C I D G N++ L +K L + +GS G R++
Sbjct: 27 ELTPQSAHLIAKLSNLTNLSINRCSIADLGTNNISQLKQIKYLRACENGIGSIGARNIGE 86
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT---------- 372
+ NL + LS I D L + LS L L+L +ITD GL +L +L
Sbjct: 87 MKNLTLLELSGNRIGDDGLESIGKLSKLAYLDLGENEITDQGLKSLNNLEKLVTLNLKNN 146
Query: 373 -----------GLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTG 415
LT+LD+ +I + GA Y+ K L+ L I +T +G+T
Sbjct: 147 KITNLETISHLKLTNLDVTTNKIGNEGAKYIAEMKRLKVLRINDNHITSDGAKILSGMTQ 206
Query: 416 LVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
L + + ++ I G + L NL L L+ +T +K +
Sbjct: 207 LTCIFLCDNLIGDEGALSIGLLYNLEYLDLKGAGITGEGLKTI 249
>gi|290977818|ref|XP_002671634.1| predicted protein [Naegleria gruberi]
gi|284085204|gb|EFC38890.1| predicted protein [Naegleria gruberi]
Length = 359
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 133/278 (47%), Gaps = 1/278 (0%)
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
F + L K+ L T G L GL L +++ N + + LS L+ L L
Sbjct: 58 FESMKKLTKVYLSSETIDSKGAKYLAGLNNLTDIHVDSYNNFGNESLYYLSKLSQLTKLS 117
Query: 187 I-SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGC 245
I S + +T G+ YL L KLT L + G T + +S+ L LN+ +SD
Sbjct: 118 IGSKNNITYEGVEYLSQLSKLTYLCITGNETTDEQVKLISSFKQLKTLNIYSNLISDKSA 177
Query: 246 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
E S + L VL + N+I + + G+ L+ L+ +G+ G+ ++ + L L
Sbjct: 178 EYISNLDELTVLVINNNQIGSKGAKFISGMKQLKQLSDSYTKLGETGVKHICEMTQLTHL 237
Query: 306 ELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL 365
+ +T++G+SG +++ L L+ +++S+ GI++ + L+ L L LN+ I + L
Sbjct: 238 YICNTKIGNSGAKNIIKLKQLQLLDISYNGINNEIVELLSQLDQLTFLNISGSAIDNLAL 297
Query: 366 AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
+ + LT+LD+ I D G Y+ K L+ + I
Sbjct: 298 TFINKMNQLTYLDVSYNGINDEGLIYISKMKPLKQVGI 335
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 121/242 (50%), Gaps = 2/242 (0%)
Query: 174 KPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNL-EGCPVTAACLDSLSALGSLF 231
K L+GL NL + + S + + + YL L +LT L++ +T ++ LS L L
Sbjct: 80 KYLAGLNNLTDIHVDSYNNFGNESLYYLSKLSQLTKLSIGSKNNITYEGVEYLSQLSKLT 139
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
YL + + +D+ + S LK LN+ N I+D+ ++ L L L +++ IG +
Sbjct: 140 YLCITGNETTDEQVKLISSFKQLKTLNIYSNLISDKSAEYISNLDELTVLVINNNQIGSK 199
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
G ++G+ LK L S T++G +G++H+ +T L + + T I + + + L L+
Sbjct: 200 GAKFISGMKQLKQLSDSYTKLGETGVKHICEMTQLTHLYICNTKIGNSGAKNIIKLKQLQ 259
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
L++ I + + L+ L LT L++ G+ I + ++ L L++ G+ D
Sbjct: 260 LLDISYNGINNEIVELLSQLDQLTFLNISGSAIDNLALTFINKMNQLTYLDVSYNGINDE 319
Query: 412 GL 413
GL
Sbjct: 320 GL 321
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 136/292 (46%), Gaps = 8/292 (2%)
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSL 230
D + + L + +S + G YL GL LT ++++ L LS L L
Sbjct: 54 DCEIFESMKKLTKVYLSSETIDSKGAKYLAGLNNLTDIHVDSYNNFGNESLYYLSKLSQL 113
Query: 231 FYLNL-NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L++ ++ ++ +G E S++ L L + NE TDE + + L++LN+ S I
Sbjct: 114 TKLSIGSKNNITYEGVEYLSQLSKLTYLCITGNETTDEQVKLISSFKQLKTLNIYSNLIS 173
Query: 290 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 349
D+ ++ L L L +++ Q+GS G + +SG+ L+ ++ S+T + + ++ + ++
Sbjct: 174 DKSAEYISNLDELTVLVINNNQIGSKGAKFISGMKQLKQLSDSYTKLGETGVKHICEMTQ 233
Query: 350 LKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLT 409
L L + +I ++G + L L LD+ I + L L L I G +
Sbjct: 234 LTHLYICNTKIGNSGAKNIIKLKQLQLLDISYNGINNEIVELLSQLDQLTFLNISGSAID 293
Query: 410 DAGLT------GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 455
+ LT L L+VS + I GL ++ +K L+ + + +++ N +
Sbjct: 294 NLALTFINKMNQLTYLDVSYNGINDEGLIYISKMKPLKQVGIGFLQLSRNQM 345
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 123/285 (43%), Gaps = 30/285 (10%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L V LS + G +L +NL + + + L +L LS LT LS N
Sbjct: 64 LTKVYLSSETIDSKGAKYLAGLNNLTDIHVDSYNNFGNESLYYLSKLSQLTKLSIGSKNN 123
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
IT +G++ + L L L + + + +L++LNI + N I+D + +S
Sbjct: 124 ITYEGVEYLSQLSKLTYLCITGNETTDEQVKLISSFKQLKTLNI-YSNLISDKSAEYISN 182
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
L L L I+ +++ G ++ G+++L L+ + + + + L +L +
Sbjct: 183 LDELTVLVINNNQIGSKGAKFISGMKQLKQLSDSYTKLGETGVKHICEMTQLTHLYICNT 242
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDE------------------------CLVHLKG 274
++ + G + K+ L++L++ +N I +E L +
Sbjct: 243 KIGNSGAKNIIKLKQLQLLDISYNGINNEIVELLSQLDQLTFLNISGSAIDNLALTFINK 302
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLK-----CLELSDTQVGS 314
+ L L++ GI DEGL+ ++ + LK L+LS Q+GS
Sbjct: 303 MNQLTYLDVSYNGINDEGLIYISKMKPLKQVGIGFLQLSRNQMGS 347
>gi|434405929|ref|YP_007148814.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
gi|428260184|gb|AFZ26134.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
Length = 384
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 151/288 (52%), Gaps = 29/288 (10%)
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
D+KPLS LTNL + I +++ D I L L KL LNL + + LS L +L
Sbjct: 107 DIKPLSNLTNLTGINIYYNQIID--IKPLSNLTKLIYLNLIKNEFSD--IKPLSNLTNLI 162
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
YL L+R Q++D + S + +L L+L N+I+D + L LT L L L I D
Sbjct: 163 YLGLSRNQIND--IKPLSNLTNLTTLDLIENKISD--IEPLSNLTKLTYLTLIENKISD- 217
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
+ L+ L NL L L + ++ S ++HLS LT L + LS ISD ++ L+ L++L
Sbjct: 218 -IKPLSNLTNLTALYLWNNEI--SDIKHLSNLTKLTYLLLSENKISD--IKPLSNLTNLT 272
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
SL LD QI+D + L++LT LT+L+L +I+D L N NL SL + +++
Sbjct: 273 SLGLDENQISD--IKPLSNLTNLTYLNLGLNQISDIKV--LSNLTNLTSLYLDYNQISNI 328
Query: 412 ----GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 455
L L +++ ++I+ +KPL N+ LE ++ N I
Sbjct: 329 QPLFNLNNLTKIDLDYNQIS-----DIKPLSNMTK--LEKLEIQNNPI 369
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 118/270 (43%), Gaps = 52/270 (19%)
Query: 63 DLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQ 122
+L+G ++ + +I +K SNL L + I+ ++ L L+NL L RN
Sbjct: 116 NLTGINIYYNQIIDIKPLSNLTKLIYLNLIKNEFSDIKPLSNLTNLIYLGLSRNQI---N 172
Query: 123 GMKAFAGLINLVKLDL-----------------ERCTRIHGGLVNLKGLMKLESLN--IK 163
+K + L NL LDL T I + ++K L L +L
Sbjct: 173 DIKPLSNLTNLTTLDLIENKISDIEPLSNLTKLTYLTLIENKISDIKPLSNLTNLTALYL 232
Query: 164 WCNCITD--------------------SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGL 203
W N I+D SD+KPLS LTNL SL + ++++D I L L
Sbjct: 233 WNNEISDIKHLSNLTKLTYLLLSENKISDIKPLSNLTNLTSLGLDENQISD--IKPLSNL 290
Query: 204 QKLTLLNLEGCPVT-AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
LT LNL ++ L +L+ L SL YL+ N+ + + +L ++L +N
Sbjct: 291 TNLTYLNLGLNQISDIKVLSNLTNLTSL-YLDYNQIS----NIQPLFNLNNLTKIDLDYN 345
Query: 263 EITDECLVHLKGLTNLESLNLDSCGIGDEG 292
+I+D + L +T LE L + + I D+
Sbjct: 346 QISD--IKPLSNMTKLEKLEIQNNPIPDKA 373
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 15/131 (11%)
Query: 72 SGLIHLKDCSNLQSL--DFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAG 129
S + L + +NL SL D N QISD ++ LSNLT+L++ +K +
Sbjct: 260 SDIKPLSNLTNLTSLGLDEN---QISD-----IKPLSNLTNLTYLNLGLNQISDIKVLSN 311
Query: 130 LINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISC 189
L NL L L+ + + N++ L L +L + SD+KPLS +T L+ L+I
Sbjct: 312 LTNLTSLYLD-----YNQISNIQPLFNLNNLTKIDLDYNQISDIKPLSNMTKLEKLEIQN 366
Query: 190 SKVTDSGIAYL 200
+ + D ++
Sbjct: 367 NPIPDKACPFI 377
>gi|356513289|ref|XP_003525346.1| PREDICTED: uncharacterized protein LOC100814174 [Glycine max]
Length = 589
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 174/393 (44%), Gaps = 47/393 (11%)
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIH-GGLVNLKGLMKLESLNIKWCNCITDSD 172
R +N++ A+ M +L L+L C R+ L + G+ L+ L++ C + D+
Sbjct: 71 RGDNSVDAEWMAYLGAYRHLRYLNLSDCHRVSTSALWPITGMSSLQELDLSRCFKVNDAG 130
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
+ + + NL+ L+IS + VT G+ L L+ L+LL+L G PV L SL L L Y
Sbjct: 131 INHILSIPNLERLRISETSVTAKGVKLLASLKNLSLLDLGGLPVDDVALTSLQVLKRLHY 190
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI---- 288
++L ++S+ G + L LNL + +T L L+ LE LN+ +C I
Sbjct: 191 IDLWGSKISNKGASVLNTFPKLTYLNLAWTSVTK-----LPKLSFLEYLNMSNCTIDSIL 245
Query: 289 -GDEGLVN---LTGLCNLKCLE---------LSDTQVGSSGLRH---LSGLTNLESINLS 332
D+ + L+G + E LS V +S LS + +E +NLS
Sbjct: 246 EDDKAPLAKLILSGAMFMNEAEALLYANTNFLSFLDVANSSFHRFFFLSKMKVIEHLNLS 305
Query: 333 FTGISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFGARITDSGAA 390
+ D S+ +A +LKSLNL +++ GL L + L L L + D+ +
Sbjct: 306 SCMMGDDSVEMVACAGGNLKSLNLSGTRVSSAGLGILAGHVPHLEILSLSQTPVDDTAIS 365
Query: 391 YLRNFKNLRSLEICG---GGLTDAGLTGLVS--------------LNVSNSRITSAGLRH 433
++ +L+ +++ G G T + S LN+ ++++ L
Sbjct: 366 FISMMPSLKDVDLSNTNIKGFLHQGRTDVNSLLSLMALQNLKLERLNLEHTQVRDEALYP 425
Query: 434 LKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
L + LR L+L+S + DI +P L
Sbjct: 426 LSSFQELRYLSLKSASLA--DISLYYLSSIPKL 456
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 151 LKGLMKLESLNIKWCNCITDS-DMKPLSGLTNLKSLQISCSKVTDSGIAYLKG-LQKLTL 208
L + +E LN+ C DS +M +G NLKSL +S ++V+ +G+ L G + L +
Sbjct: 293 LSKMKVIEHLNLSSCMMGDDSVEMVACAG-GNLKSLNLSGTRVSSAGLGILAGHVPHLEI 351
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
L+L PV + +S + SL LS+ + F G V
Sbjct: 352 LSLSQTPVDDTAISFISMMPSL-----KDVDLSNTNIKGFLHQGRTDV----------NS 396
Query: 269 LVHLKGLTNL--ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
L+ L L NL E LNL+ + DE L L+ L+ L L + L +LS + L
Sbjct: 397 LLSLMALQNLKLERLNLEHTQVRDEALYPLSSFQELRYLSLKSASLADISLYYLSSIPKL 456
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNL 355
++++ +++ L +LK L+L
Sbjct: 457 TNLSICDAVLTNYGLDMFKAPETLKLLDL 485
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 46 DKWMDVIASQGSSLLSVDLSGSDVTDSGL-IHLKDCSNLQSLDFNFCIQISDGGLEHLRG 104
D ++++A G +L S++LSG+ V+ +GL I +L+ L + + D + +
Sbjct: 311 DDSVEMVACAGGNLKSLNLSGTRVSSAGLGILAGHVPHLEILSLS-QTPVDDTAISFISM 369
Query: 105 LSNLTSLSFRRNN--AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
+ +L + N QG L++L+ L NLK LE LN+
Sbjct: 370 MPSLKDVDLSNTNIKGFLHQGRTDVNSLLSLMALQ------------NLK----LERLNL 413
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
+ + D + PLS L+ L + + + D + YL + KLT L++ +T LD
Sbjct: 414 EHTQ-VRDEALYPLSSFQELRYLSLKSASLADISLYYLSSIPKLTNLSICDAVLTNYGLD 472
Query: 223 SLSALGSLFYLNLNRCQL 240
A +L L+L C L
Sbjct: 473 MFKAPETLKLLDLKGCWL 490
>gi|290996590|ref|XP_002680865.1| predicted protein [Naegleria gruberi]
gi|284094487|gb|EFC48121.1| predicted protein [Naegleria gruberi]
Length = 304
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 143/308 (46%), Gaps = 33/308 (10%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
+++ L ++T LSF + + K F+ L NL LDL
Sbjct: 2 IDYFPTLESVTDLSFNHH-QVRITNTKIFSKLKNLTALDLS------------------- 41
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
+ +TD+ +K +S + +++ L I C+ + I Y+ ++ L L L + A
Sbjct: 42 -----YNELVTDAHVKEISLIPSMRRLNIFCTDIGKQSIVYISEMKLLESLILGELRLEA 96
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCE-KFSKIGSLK--VLNLGFNEITDECLVHLKGL 275
+ L L +L LN C G S++ SL +LN+ +N+ +E + ++ L
Sbjct: 97 ESVAYLKKLTNLKELN---CSPDSYGTSAHLSEMKSLNSLILNVKYNK--EEDIENISKL 151
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 335
T+L L L + I +G L+ + + L LS + +GL ++ L NL +NLS+ G
Sbjct: 152 TSLNHLKLWNSNINSKGAEFLSNISSFTSLNLSGNVIRDAGLVNIGKLANLTFLNLSYNG 211
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF 395
+SD + L L L LNL+ I D G ++ + L +L L +IT +GA YL N
Sbjct: 212 LSDSGITNLGNLRKLTDLNLNGNNIEDQGAKIISKFSHLKYLQLRNNQITKNGANYLSNL 271
Query: 396 KNLRSLEI 403
+L SL++
Sbjct: 272 NSLYSLDL 279
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 120/232 (51%), Gaps = 9/232 (3%)
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNE-ITDECLVHLKGLTNLE 279
+D L S+ L+ N Q+ + FSK+ +L L+L +NE +TD + + + ++
Sbjct: 2 IDYFPTLESVTDLSFNHHQVRITNTKIFSKLKNLTALDLSYNELVTDAHVKEISLIPSMR 61
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
LN+ IG + +V ++ + L+ L L + ++ + + +L LTNL+ +N S S G
Sbjct: 62 RLNIFCTDIGKQSIVYISEMKLLESLILGELRLEAESVAYLKKLTNLKELNCS--PDSYG 119
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
+ L+ + SL SL L+ + + + ++ LT L HL L+ + I GA +L N +
Sbjct: 120 TSAHLSEMKSLNSLILNVKYNKEEDIENISKLTSLNHLKLWNSNINSKGAEFLSNISSFT 179
Query: 400 SLEICGGGLTDAGLT------GLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
SL + G + DAGL L LN+S + ++ +G+ +L L+ L L L
Sbjct: 180 SLNLSGNVIRDAGLVNIGKLANLTFLNLSYNGLSDSGITNLGNLRKLTDLNL 231
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 42/287 (14%)
Query: 52 IASQGSSLLSVDLSGSD-VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTS 110
I S+ +L ++DLS ++ VTD+ + + +++ L+ FC I + ++ + L S
Sbjct: 28 IFSKLKNLTALDLSYNELVTDAHVKEISLIPSMRRLNI-FCTDIGKQSIVYISEMKLLES 86
Query: 111 L---SFRRNNAITAQGMKAFAGLINLVKLDLERCTR-IHGGLVNLKGLMKLESL--NIKW 164
L R + A+ + L NL +L+ C+ +G +L + L SL N+K+
Sbjct: 87 LILGELR----LEAESVAYLKKLTNLKELN---CSPDSYGTSAHLSEMKSLNSLILNVKY 139
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
+ D++ +S LT+L L++ S + G +L + T LNL G + A L ++
Sbjct: 140 N---KEEDIENISKLTSLNHLKLWNSNINSKGAEFLSNISSFTSLNLSGNVIRDAGLVNI 196
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
L +L +LNL+ LSD G + L LNL N
Sbjct: 197 GKLANLTFLNLSYNGLSDSGITNLGNLRKLTDLNLNGN---------------------- 234
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
I D+G ++ +LK L+L + Q+ +G +LS L +L S++L
Sbjct: 235 --NIEDQGAKIISKFSHLKYLQLRNNQITKNGANYLSNLNSLYSLDL 279
>gi|343414367|emb|CCD21012.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 1699
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 126/378 (33%), Positives = 199/378 (52%), Gaps = 37/378 (9%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
L + S+L++LD + C I+D + L LS+L +L IT + + + L KL
Sbjct: 745 LSELSSLRTLDISHCTGITD--VSPLSELSSLRTLDLSHCTDIT--NVSPLSKISTLQKL 800
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDS 195
DL CT + + L ++ LE L + C IT D+ PLS L++L+ L +S C+ +TD
Sbjct: 801 DLSHCTGV-TDVSPLSKMIGLEKLYLSHCTGIT--DVPPLSELSSLRMLDLSHCTGITD- 856
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 255
++ L L L L+L C + LS L SL L+L+ C D S++ SL+
Sbjct: 857 -VSPLSELSSLHTLDLSHC-TGITDVSPLSELSSLRTLDLSHCTGITD-VSPLSELSSLR 913
Query: 256 VLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVG 313
L+L ITD + L L++L +L+L C GI D + L+ L +L+ L+LS G
Sbjct: 914 TLDLSHCTGITD--VSPLSELSSLRTLDLSHCTGITD--VSPLSKLSSLRTLDLSHC-TG 968
Query: 314 SSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSL 371
+ + LS L++L +++LS TGI+D S L+ LSSL++L+L ITD ++ L+ L
Sbjct: 969 ITDVSPLSELSSLRTLDLSHCTGITDVS--PLSKLSSLRTLDLSHCTGITD--VSPLSEL 1024
Query: 372 TGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEICG-GGLTDAG----LTGLVSLNVSNSR 425
+ L LDL ITD + L +LR+L++ G+TD L+ L +L++S+
Sbjct: 1025 SSLRTLDLSHCTGITD--VSPLSELSSLRTLDLSHCTGITDVSPLSKLSSLRTLDLSH-- 1080
Query: 426 ITSAGLRHLKPLKNLRSL 443
G+ + PL L SL
Sbjct: 1081 --CTGITDVSPLSELSSL 1096
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 123/375 (32%), Positives = 190/375 (50%), Gaps = 50/375 (13%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNF 90
+L+ L L G+ D S+ SSL ++DLS + +TD + L S+L++LD +
Sbjct: 1348 SLRTLDLSHCTGITDVSP---LSELSSLRTLDLSHCTGITD--VSPLSKLSSLRTLDLSH 1402
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN 150
C I+D + L LS+L +L IT + + L +L LDL CT I +
Sbjct: 1403 CTGITD--VSPLSVLSSLRTLGLSHCTGIT--DVSPLSELSSLRTLDLSHCTGI-TDVSP 1457
Query: 151 LKGLMKLESLNIKWCNCITD---------------------SDMKPLSGLTNLKSLQIS- 188
L L L +L++ C ITD +D+ PLS L+NL++L +S
Sbjct: 1458 LSELSSLRTLDLSHCTGITDVSPLSVFSSLRTLGLSHCTGITDVSPLSELSNLRTLDLSH 1517
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
C+ +TD ++ L L L L+L C + LS L SL L+L+ C D
Sbjct: 1518 CTGITD--VSPLSELSSLRTLDLSHC-TGITDVSPLSELSSLRTLDLSHCTGITD-VSPL 1573
Query: 249 SKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLE 306
SK+ SL+ L+L ITD + L L++L +L+L C GI D + L+ L +L+ L+
Sbjct: 1574 SKLSSLRTLDLSHCTGITD--VSPLSELSSLRTLDLSHCTGITD--VSPLSELSSLRTLD 1629
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLN-LDARQITDTG 364
LS G + + LS L++L +++LS TGI+D S L+ LSSL++L+ L ITD
Sbjct: 1630 LSHC-TGITDVSPLSKLSSLRTLDLSHCTGITDVS--PLSELSSLRTLDLLHCTGITD-- 1684
Query: 365 LAALTSLTGLTHLDL 379
++ L+ L+ L LD
Sbjct: 1685 VSPLSELSSLGTLDF 1699
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 195/388 (50%), Gaps = 57/388 (14%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA-QGMKAFAGLINLVK 135
L + S+L++LD + C G+ ++ LSNL+SL + T + + L +L
Sbjct: 1297 LSELSSLRTLDLSHC-----RGIANVSPLSNLSSLRMLNLSHCTGITDVSPLSVLSSLRT 1351
Query: 136 LDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTD 194
LDL CT I + L L L +L++ C ITD + PLS L++L++L +S C+ +TD
Sbjct: 1352 LDLSHCTGI-TDVSPLSELSSLRTLDLSHCTGITD--VSPLSKLSSLRTLDLSHCTGITD 1408
Query: 195 SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSL 254
++ L L L L L C + LS L SL L+L+ C D S++ SL
Sbjct: 1409 --VSPLSVLSSLRTLGLSHC-TGITDVSPLSELSSLRTLDLSHCTGITD-VSPLSELSSL 1464
Query: 255 KVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQV 312
+ L+L ITD + L ++L +L L C GI D + L+ L NL+ L+LS
Sbjct: 1465 RTLDLSHCTGITD--VSPLSVFSSLRTLGLSHCTGITD--VSPLSELSNLRTLDLS---- 1516
Query: 313 GSSGLRHLSGLTN---------LESINLSF-TGISDGSLRKLAGLSSLKSLNLD-ARQIT 361
H +G+T+ L +++LS TGI+D S L+ LSSL++L+L IT
Sbjct: 1517 ------HCTGITDVSPLSELSSLRTLDLSHCTGITDVS--PLSELSSLRTLDLSHCTGIT 1568
Query: 362 DTGLAALTSLTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEICG-GGLTDAG----LTG 415
D ++ L+ L+ L LDL ITD + L +LR+L++ G+TD L+
Sbjct: 1569 D--VSPLSKLSSLRTLDLSHCTGITD--VSPLSELSSLRTLDLSHCTGITDVSPLSELSS 1624
Query: 416 LVSLNVSNSRITSAGLRHLKPLKNLRSL 443
L +L++S+ G+ + PL L SL
Sbjct: 1625 LRTLDLSH----CTGITDVSPLSKLSSL 1648
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 218/448 (48%), Gaps = 68/448 (15%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNF 90
+L+ L L G+ D S+ SSL ++DLS + +TD + L + S+L++LD +
Sbjct: 1049 SLRTLDLSHCTGITDVSP---LSKLSSLRTLDLSHCTGITD--VSPLSELSSLRTLDLSH 1103
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN 150
C I+D + L LS+L +L IT + + L +L LDL CT I +
Sbjct: 1104 CTGITD--VSPLSELSSLRTLDLSHCTGIT--DVSPLSELSSLRTLDLSHCTGI-TDVSP 1158
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLL 209
L L L +L++ C IT D+ PLS L++L +L++S C+ +TD ++ L L L L
Sbjct: 1159 LSELSSLRTLDLSHCTGIT--DVSPLSKLSSLCTLELSHCTGITD--VSPLSELSSLRTL 1214
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-------- 261
+L C + LS L + L+L+ C D S + SL+ L+L +
Sbjct: 1215 DLSHCRGITD-VSPLSELSNFVQLDLSHCTGITD-VSPLSVLSSLRTLDLSYCTGITNVS 1272
Query: 262 ----------------NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
ITD + L L++L +L+L C G+ N++ L NL L
Sbjct: 1273 PLSNLSSLRSLDLSHCTGITD--VSPLSELSSLRTLDLSHC----RGIANVSPLSNLSSL 1326
Query: 306 ELSDTQ--VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLD-ARQIT 361
+ + G + + LS L++L +++LS TGI+D S L+ LSSL++L+L IT
Sbjct: 1327 RMLNLSHCTGITDVSPLSVLSSLRTLDLSHCTGITDVS--PLSELSSLRTLDLSHCTGIT 1384
Query: 362 DTGLAALTSLTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEICG-GGLTDAG----LTG 415
D ++ L+ L+ L LDL ITD + L +LR+L + G+TD L+
Sbjct: 1385 D--VSPLSKLSSLRTLDLSHCTGITD--VSPLSVLSSLRTLGLSHCTGITDVSPLSELSS 1440
Query: 416 LVSLNVSNSRITSAGLRHLKPLKNLRSL 443
L +L++S+ G+ + PL L SL
Sbjct: 1441 LRTLDLSH----CTGITDVSPLSELSSL 1464
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 191/385 (49%), Gaps = 33/385 (8%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
D+ D L L L++LD + C I+D L L LS L +L IT +
Sbjct: 345 DINDVTLRDLDGNECLRTLDLSHCTGITDVSL--LSKLSGLHTLGLSHCTGIT--DVSPL 400
Query: 128 AGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
+ L L L L CT I + L L L +L + C IT D+ PLS ++L++L I
Sbjct: 401 SNLSGLRMLGLSHCTGI-TDVSPLSELSSLRTLGLSHCTGIT--DVSPLSVFSSLRTLGI 457
Query: 188 S-CSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGC 245
S C+ +TD S ++ + GLQKL L + G +T + LSAL S L+L+ C D
Sbjct: 458 SHCTGITDVSPLSKMNGLQKLYLSHCTG--ITD--VPPLSALSSFEKLDLSHCTGITD-V 512
Query: 246 EKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLK 303
S + SL+ L++ ITD + L + L+ L L C GI D + L+ L + +
Sbjct: 513 SPLSVLSSLRTLDISHCTGITD--VSPLSKMNGLQKLYLSHCTGITD--VPPLSALSSFE 568
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDARQITD 362
L+LS G + + LS L++L +++LS TGI++ S L SSL+ L++ +
Sbjct: 569 KLDLSHC-TGITDVSPLSKLSSLHTLDLSHCTGITNVS--PLLKFSSLRMLDI-SHCTGI 624
Query: 363 TGLAALTSLTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEI--CGGGLTDAGLTGLVSL 419
T ++ L+ L+ L LDL ITD + L F +L +L++ C G + L+ SL
Sbjct: 625 TNVSPLSELSSLRTLDLSHCTGITD--VSPLSKFSSLHTLDLSHCTGITNVSPLSKFSSL 682
Query: 420 NVSN-SRITSAGLRHLKPLKNLRSL 443
+ + S T G+ ++ PL L SL
Sbjct: 683 RMLDISHCT--GITNVSPLSKLSSL 705
>gi|449019210|dbj|BAM82612.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]
Length = 2325
Score = 93.2 bits (230), Expect = 3e-16, Method: Composition-based stats.
Identities = 131/457 (28%), Positives = 203/457 (44%), Gaps = 104/457 (22%)
Query: 83 LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR----RNNAI-TAQGMKAFAGLINLVKLD 137
L+ LD + CI ++D GL L ++ L++ + + AI + +A AGL+ L
Sbjct: 1801 LKHLDLSSCIHLTDEGLGAL--VAALSTPEAKAGDSEDTAIESVATTEASAGLV--APLT 1856
Query: 138 LERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL--SGLTNLKSLQISCSKVTDS 195
E + G LE+L++ C + D ++PL +L+ + +S +++T +
Sbjct: 1857 TEALLYSSSSNSSSSG--TLETLSVAHCFRLGDRSLRPLLRQHRQSLRVVDLSYTRITGA 1914
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAAC-LDSLSALG--------SLFYLNLNRC-QLSDDG- 244
+ L L +L L+L GC T + D+ + G L +L+L +C QL DG
Sbjct: 1915 VLQELGALPQLQSLSLCGCGETLSVESDAATRFGEELALPGKQLVHLDLGKCAQLVTDGF 1974
Query: 245 ----------------------------CEK--------FSKIGSLKVLNLGFNEITDEC 268
E+ +S +L+ L++ +TD
Sbjct: 1975 LAALAGLASGRRTHHQYNRQQYQQNPAAVERLVHATHGVYSSRDTLRSLSVHGCRLTDRS 2034
Query: 269 LVH-LKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQVGSS-GLRHLSGLTN 325
L H ++ LE L+L C I D GL +L L +L+ L+L+DT V S+ G L+ L
Sbjct: 2035 LSHYVRLFQGLERLDLSQCRLITDAGLEHLQSLKSLRELDLADTNVTSAVGASLLARLRQ 2094
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA------------------- 366
L ++LS+T + + L+ L L+ L LDAR I+D L
Sbjct: 2095 LRRLDLSYTAVQSNITKSLSTLEQLEWLGLDARLISDDALQVEENEASPEPVSSRDVAAP 2154
Query: 367 ALTSLT-------------GLTHLDLFGARITDSGAAYL-RNFKNLRSLEICGGGLTDAG 412
AL+S T L HLDLFGA ITD G +YL + + SLE+C G LTDA
Sbjct: 2155 ALSSATVAVHLHRRIGLPRHLRHLDLFGAHITDRGMSYLVQACPYVESLEVCSGALTDAA 2214
Query: 413 -------LTGLVSLNVS-NSRITSAGLRHLKPLKNLR 441
L L +LN+S N RI+ AGLR L ++
Sbjct: 2215 LRLIAQHLPYLRALNISQNMRISDAGLREYARLAQVQ 2251
Score = 63.2 bits (152), Expect = 3e-07, Method: Composition-based stats.
Identities = 118/412 (28%), Positives = 176/412 (42%), Gaps = 62/412 (15%)
Query: 61 SVDLSG-SDVTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNN 117
++DLSG S +TD GLI L L+ + C+ I G+ L R S L LS
Sbjct: 1713 TLDLSGCSHITDRGLIGLAPHLRQLKECILDGCLGIWGPGVRALLRLCSKLERLSLAGCR 1772
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS 177
++T + AF GL + V C R G LK L++ C +TD + L
Sbjct: 1773 SLTDE---AFQGLASGVARG--PCQRTSAGRFALK------HLDLSSCIHLTDEGLGAL- 1820
Query: 178 GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL-----DSLSALGSLFY 232
+ +L +K DS ++ + P+T L + S+ G+L
Sbjct: 1821 ----VAALSTPEAKAGDSEDTAIESVATTEASAGLVAPLTTEALLYSSSSNSSSSGTLET 1876
Query: 233 LNLNRC-QLSDDGCEKFSKI--GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L++ C +L D + SL+V++L + IT L L L L+SL+L CG G
Sbjct: 1877 LSVAHCFRLGDRSLRPLLRQHRQSLRVVDLSYTRITGAVLQELGALPQLQSLSL--CGCG 1934
Query: 290 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 349
+ L + T+ G L +L+ + ++DG L LAGL+S
Sbjct: 1935 E----------TLSVESDAATRFGEELALPGKQLVHLD-LGKCAQLVTDGFLAALAGLAS 1983
Query: 350 -LKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL 408
++ + RQ AA+ L TH ++ +R T LRSL + G L
Sbjct: 1984 GRRTHHQYNRQQYQQNPAAVERLVHATH-GVYSSRDT------------LRSLSVHGCRL 2030
Query: 409 TDAGLT-------GLVSLNVSNSR-ITSAGLRHLKPLKNLRSLTLESCKVTA 452
TD L+ GL L++S R IT AGL HL+ LK+LR L L VT+
Sbjct: 2031 TDRSLSHYVRLFQGLERLDLSQCRLITDAGLEHLQSLKSLRELDLADTNVTS 2082
Score = 42.0 bits (97), Expect = 0.67, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 52 IASQGSSLLSVDLSGSDVTDSGLIH-LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTS 110
+ S +L S+ + G +TD L H ++ L+ LD + C I+D GLEHL+ L +L
Sbjct: 2013 VYSSRDTLRSLSVHGCRLTDRSLSHYVRLFQGLERLDLSQCRLITDAGLEHLQSLKSLRE 2072
Query: 111 LSFRRNNAITAQG 123
L N +A G
Sbjct: 2073 LDLADTNVTSAVG 2085
>gi|384253405|gb|EIE26880.1| RNI-like protein [Coccomyxa subellipsoidea C-169]
Length = 641
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 135/476 (28%), Positives = 202/476 (42%), Gaps = 85/476 (17%)
Query: 55 QGSSLLSVDLSGSDVTDSG---------LIHLKDCSNLQSLD-FNFCIQISDGGLEHLRG 104
+G++L +DLSG D+T L L+ + Q L ++ C Q+ D E L
Sbjct: 57 RGTTLRKLDLSGCDLTMPAGTLLDLLWNLTQLEHLAIAQQLPKYDACFQVDDELCEALGR 116
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT-RIHGGLVNLKGLMKLESLNI- 162
+ LT L R+ + IT +G+ AGL L L L C + ++ +L L+I
Sbjct: 117 MRGLTHLDLRQPSPITGRGLDRLAGLERLRTLRLGPCAGLLDSSFQSIACHTQLTELDIC 176
Query: 163 -----KWCNCITDSDMKPLSGLTNLKSLQIS---CSKVTDSGIAYLKGLQKLTLLNLEGC 214
+ C + + L+ L NL SLQ++ S+ D + L L LT L L
Sbjct: 177 FGEKGRTCTSLPAEVLAQLATLPNLVSLQLAGFDTSRTED--LPSLHCLSTLTHLGLSQV 234
Query: 215 -----PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL-GFNEITDEC 268
P A + SL L LN+C + D S+ +L+ L++ + +
Sbjct: 235 TNSRSPGGVATFLRCMPIQSLIRLELNQCNIGIDVFPLISQATTLRALSVTQCSPVYGLD 294
Query: 269 LVHLKGLTNLESLNLD---------------------SCGIGDEGLV-----NLTGLC-- 300
L H+ GL+ LESL LD SC + L N+ GL
Sbjct: 295 LHHMSGLSRLESLTLDHSHPLSSNWSFLQHLTRLTQFSCAAHKDALPMSSDHNIAGLLEN 354
Query: 301 -----NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS-----------LRKL 344
+L+ L+L +G L ++ LT L +++S G S L +L
Sbjct: 355 AIARKDLQRLDLRGHLLGKE-LGDIAALTALTELDISAAGCDVASHPSIACVFNLGLAQL 413
Query: 345 AGLSSLKSLNLDARQITDTGLAALTS-LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
AGLS L+ LNL + + GL + S L L HLDL G+ + D+ A+L L+SL I
Sbjct: 414 AGLSRLQRLNLACTAVDEEGLRGICSGLRELLHLDLSGSAVEDADLAHLTKLPRLQSLRI 473
Query: 404 CGGG----LTDAGL------TGLVSLNVS-NSRITSAGLRHLKPLKNLRSLTLESC 448
++DAGL + L L V N IT+AGL+HL L L L + C
Sbjct: 474 NNQPALDDISDAGLAEVSRVSALRCLEVKGNQCITAAGLKHLSALTGLSDLDVSDC 529
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFN---FCIQISDGGL 99
V+++ + I S LL +DLSGS V D+ L HL LQSL N ISD GL
Sbjct: 428 AVDEEGLRGICSGLRELLHLDLSGSAVEDADLAHLTKLPRLQSLRINNQPALDDISDAGL 487
Query: 100 EHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG--GLVNLKGLMKL 157
+ +S L L + N ITA G+K + L L LD+ C+ I+ L +L+G L
Sbjct: 488 AEVSRVSALRCLEVKGNQCITAAGLKHLSALTGLSDLDVSDCSAINPKRALNSLQGCTAL 547
Query: 158 ESL 160
L
Sbjct: 548 RML 550
>gi|300704275|ref|YP_003745878.1| leucine-rich-repeat type III effector protein (gala6) [Ralstonia
solanacearum CFBP2957]
gi|299071939|emb|CBJ43268.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
solanacearum CFBP2957]
Length = 519
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 136/464 (29%), Positives = 200/464 (43%), Gaps = 54/464 (11%)
Query: 4 RDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVN------DKWMDVIASQGS 57
R++++++ N SR + V+ RD A+ LG+YP + + ++ + +
Sbjct: 2 REVNRELRN---ASRAV--VTHLTIRDPAMF-AHLGKYPALTSVRFKGELTLEALKALPP 55
Query: 58 SLLSVDLS---GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
+ +D+S G V+++GL HL L+SL N I+I G L ++LTSLS
Sbjct: 56 GVEHLDISRCTGRGVSNAGLAHLA-TRPLKSLSLN-GIEIDAEGARLLATCASLTSLSLT 113
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGL--------MKLESLNIKWCN 166
+I + A A ++ LDL VN+ G L SLN+ N
Sbjct: 114 -GCSIGDRAATALAQSRSIASLDLS---------VNMIGPDGARALASAPLVSLNLH-NN 162
Query: 167 CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA 226
I D L+ LKSL S + + D+G+ LT LNL G + A +L
Sbjct: 163 GIGDEGALALATSGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAGNMIGPAGARALRR 222
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC 286
SL L+L+ +L D G + + SL LN+ NEI D+ L T L+SLNL
Sbjct: 223 NTSLTELDLSTNRLGDAGAQALAGSRSLTSLNVRSNEIGDDGTEALARNTTLKSLNLSYN 282
Query: 287 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAG 346
IG G L G L+ L+L + G L+ T+L S++L I D R LA
Sbjct: 283 PIGFWGAGALGGSTTLRELDLRCCAIDPYGASALARNTSLASLHLGSNRIGDDGARALAT 342
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG 406
+L L+L I D G AL LT L+L+G + D GAA L
Sbjct: 343 SRTLTLLDLSRNNIHDAGAQALAGNGSLTSLNLYGNEVDDDGAAALAQHPR--------- 393
Query: 407 GLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
L SLN+ +RI G +HL L L L ++
Sbjct: 394 ---------LTSLNLGRNRIGPNGAQHLAKSATLTELDLSENRL 428
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 156/402 (38%), Gaps = 53/402 (13%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLE-----------HLRGL 105
+SL S+ L+G + D L ++ SLD + + DG H G+
Sbjct: 105 ASLTSLSLTGCSIGDRAATALAQSRSIASLDLSVNMIGPDGARALASAPLVSLNLHNNGI 164
Query: 106 SNLTSLSFR----------RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLM 155
+ +L+ NN I G+ FA L +L+L G L+
Sbjct: 165 GDEGALALATSGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAGNMIGPAGARALRRNT 224
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 215
L L++ N + D+ + L+G +L SL + +++ D G L L LNL P
Sbjct: 225 SLTELDLS-TNRLGDAGAQALAGSRSLTSLNVRSNEIGDDGTEALARNTTLKSLNLSYNP 283
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
+ +L +L L+L C + G ++ SL L+LG N
Sbjct: 284 IGFWGAGALGGSTTLRELDLRCCAIDPYGASALARNTSLASLHLGSNR------------ 331
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 335
IGD+G L L L+LS + +G + L+G +L S+NL
Sbjct: 332 ------------IGDDGARALATSRTLTLLDLSRNNIHDAGAQALAGNGSLTSLNLYGNE 379
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF 395
+ D LA L SLNL +I G L LT LDL R+ GA L
Sbjct: 380 VDDDGAAALAQHPRLTSLNLGRNRIGPNGAQHLAKSATLTELDLSENRLGPEGAEALSLS 439
Query: 396 KNLRSLEICGGGLTDAGL-------TGLVSLNVSNSRITSAG 430
L +L + + +AG T L SL+ N+R+ AG
Sbjct: 440 TVLTTLNVSDNAIGEAGARAFAEKSTSLTSLDARNNRMGEAG 481
>gi|168052598|ref|XP_001778727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669846|gb|EDQ56425.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 643
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 204/471 (43%), Gaps = 36/471 (7%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIA--SQGSS 58
MLP +++ ++FN L+ S L+ + F+ LQ++ L V+ +WM + +
Sbjct: 41 MLPSELAHELFNSLLQSHLLSATLIGLFQS-NLQEVNLSGEATVDGEWMAYLGGCRHLRA 99
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L + D +T++ + L + ++ LD C +ISD + H+ L L
Sbjct: 100 LRATDCKA--LTNNAIRQLTGLTAMEELDLARCRKISDDAVPHILSFKMLRKLGLAETGL 157
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
T + GL LV LDL C L++ + L LE L++ W + +T+ + LS
Sbjct: 158 TTKGLLLL-PGLSRLVLLDLGGCPVTDADLISFQALGMLEHLDL-WGSKVTNMGARCLSS 215
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
LK L ++ + VT L ++E DSL L LF L+
Sbjct: 216 FKTLKYLNLAMTAVTAIPQLNSLLSLNLCNCDVESIYGDGTFSDSL--LRELF---LSGA 270
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITD-ECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
LS S +L +L+L + + D + VH+ L L+L + G+ +E ++
Sbjct: 271 SLSLKDVISGSNTRNLHLLDLASSRVNDLDAFVHIP---KLAILDLRATGLTNELMLKFQ 327
Query: 298 GLC-NLKCLELSDTQVGSSGLRHLSG-LTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
GL NL+ ++LS T++ S G+ ++G N+E ++L+ T + D L L+SLNL
Sbjct: 328 GLGDNLRWIDLSYTKIDSEGVGAIAGHAPNVEQLSLNHTPVDDNVFIYLVHFPVLQSLNL 387
Query: 356 DARQITD---------TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN---LRSLEI 403
++ ++ L+ L L HL R T G A L KN L L I
Sbjct: 388 GGSKVNGFMTVGSEEFQQISVLSYLEQLQHLRRLDMRYTGVGDAALHGLKNLVQLSHLHI 447
Query: 404 CGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
L+D + LV L + + IT+ GL KP L L L C
Sbjct: 448 HSNSLSDECLQQLSSFPNLVCLGIGGATITADGLLSYKPPSLLEELDLTDC 498
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 167/413 (40%), Gaps = 101/413 (24%)
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYL---KGL 203
+ L G L +L C +T++ ++ L+GLT ++ L ++ C K++D + ++ K L
Sbjct: 88 MAYLGGCRHLRALRATDCKALTNNAIRQLTGLTAMEELDLARCRKISDDAVPHILSFKML 147
Query: 204 QKL---------------------TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
+KL LL+L GCPVT A L S ALG L +L+L ++++
Sbjct: 148 RKLGLAETGLTTKGLLLLPGLSRLVLLDLGGCPVTDADLISFQALGMLEHLDLWGSKVTN 207
Query: 243 DGCEKFSKIGSLKVLNLGFNEIT----------------------------DECLVHL-- 272
G S +LK LNL +T D L L
Sbjct: 208 MGARCLSSFKTLKYLNLAMTAVTAIPQLNSLLSLNLCNCDVESIYGDGTFSDSLLRELFL 267
Query: 273 -------------KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
NL L+L S + D L + L L+L T + + +
Sbjct: 268 SGASLSLKDVISGSNTRNLHLLDLASSRVND--LDAFVHIPKLAILDLRATGLTNELMLK 325
Query: 320 LSGL-TNLESINLSFTGISDGSLRKLAGLSS-LKSLNLDARQITDTGLAALTSLTGLTHL 377
GL NL I+LS+T I + +AG + ++ L+L+ + D L L L
Sbjct: 326 FQGLGDNLRWIDLSYTKIDSEGVGAIAGHAPNVEQLSLNHTPVDDNVFIYLVHFPVLQSL 385
Query: 378 DLFGARITD------------SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS------L 419
+L G+++ S +YL ++LR L++ G+ DA L GL + L
Sbjct: 386 NLGGSKVNGFMTVGSEEFQQISVLSYLEQLQHLRRLDMRYTGVGDAALHGLKNLVQLSHL 445
Query: 420 NVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFRPE 472
++ ++ ++ L+ L NL L + +TA+ L+S++P
Sbjct: 446 HIHSNSLSDECLQQLSSFPNLVCLGIGGATITAD-----------GLLSYKPP 487
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 71/162 (43%), Gaps = 33/162 (20%)
Query: 324 TNLESINLSFTGISDGS-LRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFG 381
+NL+ +NLS DG + L G L++L D + +T+ + LT LT + LDL
Sbjct: 70 SNLQEVNLSGEATVDGEWMAYLGGCRHLRALRATDCKALTNNAIRQLTGLTAMEELDLAR 129
Query: 382 AR-ITDSGAAYLRNFKNLRS------------------------LEICGGGLTDAGLTG- 415
R I+D ++ +FK LR L++ G +TDA L
Sbjct: 130 CRKISDDAVPHILSFKMLRKLGLAETGLTTKGLLLLPGLSRLVLLDLGGCPVTDADLISF 189
Query: 416 -----LVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
L L++ S++T+ G R L K L+ L L VTA
Sbjct: 190 QALGMLEHLDLWGSKVTNMGARCLSSFKTLKYLNLAMTAVTA 231
>gi|432942786|ref|XP_004083072.1| PREDICTED: F-box/LRR-repeat protein 14-like [Oryzias latipes]
Length = 400
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 169/307 (55%), Gaps = 26/307 (8%)
Query: 82 NLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLI-NLVKLDL 138
N++SL+ + C ++D GL H ++ + +L L+ IT + A + NL L+L
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQEIPSLRVLNLSLCKQITDSSLGRIAQYLKNLEMLEL 150
Query: 139 ERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT--------NLKSLQIS 188
C+ I G L+ GL +L+SLN++ C ++D + L+G+T NL+ L +
Sbjct: 151 GGCSNITNTGLLLVAWGLHRLKSLNLRSCRHVSDVGIGHLAGMTRSAAEGCLNLEYLTLQ 210
Query: 189 -CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDG 244
C K+TD + ++ KGL KL +LNL C ++ A + LS +GSL+ LNL C +SD G
Sbjct: 211 DCQKLTDLSLKHISKGLTKLRVLNLSFCGGISDAGMIHLSHMGSLWSLNLRSCDNISDTG 270
Query: 245 CEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGLVNLT-GL 299
+ +GSL++ L++ F ++I D+ L ++ +GL L+SL+L SC I D+G+ + +
Sbjct: 271 TMHLA-MGSLRLSGLDVSFCDKIGDQTLAYIAQGLYQLKSLSLCSCHISDDGINRMVRQM 329
Query: 300 CNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNLD 356
L+ L + ++ GL ++ LT L I+L T I+ L ++ L LK LNL
Sbjct: 330 HELRTLNIGQCVRITDKGLELIADHLTQLVGIDLYGCTKITKRGLERITQLPCLKVLNLG 389
Query: 357 ARQITDT 363
Q+T++
Sbjct: 390 LWQMTES 396
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 167/327 (51%), Gaps = 32/327 (9%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMP------NIESLNLSGCYNLTDNGLGHAFVQEIPSLRV 121
Query: 160 LNIKWCNCITDSDMKPLSG-LTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGC-P 215
LN+ C ITDS + ++ L NL+ L++ CS +T++G+ + GL +L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIAQYLKNLEMLELGGCSNITNTGLLLVAWGLHRLKSLNLRSCRH 181
Query: 216 VTAACLDSLSALG--------SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-NEI 264
V+ + L+ + +L YL L CQ L+D + SK + L+VLNL F I
Sbjct: 182 VSDVGIGHLAGMTRSAAEGCLNLEYLTLQDCQKLTDLSLKHISKGLTKLRVLNLSFCGGI 241
Query: 265 TDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRHLS 321
+D ++HL + +L SLNL SC I D G ++L G L L++S ++G L +++
Sbjct: 242 SDAGMIHLSHMGSLWSLNLRSCDNISDTGTMHLAMGSLRLSGLDVSFCDKIGDQTLAYIA 301
Query: 322 -GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALT-SLTGLTHL 377
GL L+S++L ISD + R + + L++LN+ +ITD GL + LT L +
Sbjct: 302 QGLYQLKSLSLCSCHISDDGINRMVRQMHELRTLNIGQCVRITDKGLELIADHLTQLVGI 361
Query: 378 DLFG-ARITDSGAAYLRNFKNLRSLEI 403
DL+G +IT G + L+ L +
Sbjct: 362 DLYGCTKITKRGLERITQLPCLKVLNL 388
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 114/214 (53%), Gaps = 16/214 (7%)
Query: 69 VTDSGLIHL--------KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAI 119
V+D G+ HL + C NL+ L C +++D L+H+ +GL+ L L+ I
Sbjct: 182 VSDVGIGHLAGMTRSAAEGCLNLEYLTLQDCQKLTDLSLKHISKGLTKLRVLNLSFCGGI 241
Query: 120 TAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLK-GLMKLESLNIKWCNCITDSDMKPLS 177
+ GM + + +L L+L C I G ++L G ++L L++ +C+ I D + ++
Sbjct: 242 SDAGMIHLSHMGSLWSLNLRSCDNISDTGTMHLAMGSLRLSGLDVSFCDKIGDQTLAYIA 301
Query: 178 -GLTNLKSLQISCSKVTDSGI-AYLKGLQKLTLLNLEGC-PVTAACLDSLS-ALGSLFYL 233
GL LKSL + ++D GI ++ + +L LN+ C +T L+ ++ L L +
Sbjct: 302 QGLYQLKSLSLCSCHISDDGINRMVRQMHELRTLNIGQCVRITDKGLELIADHLTQLVGI 361
Query: 234 NLNRC-QLSDDGCEKFSKIGSLKVLNLGFNEITD 266
+L C +++ G E+ +++ LKVLNLG ++T+
Sbjct: 362 DLYGCTKITKRGLERITQLPCLKVLNLGLWQMTE 395
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 95/197 (48%), Gaps = 39/197 (19%)
Query: 272 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 322
++G+ N+ESLNL C G+G + + L L C +++D+ +G R
Sbjct: 86 IQGMPNIESLNLSGCYNLTDNGLGHAFVQEIPSLRVLNLSLCKQITDSSLG----RIAQY 141
Query: 323 LTNLESINLS-FTGISDGSLRKLA-GLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL 379
L NLE + L + I++ L +A GL LKSLNL + R ++D G+ L
Sbjct: 142 LKNLEMLELGGCSNITNTGLLLVAWGLHRLKSLNLRSCRHVSDVGIGHL----------- 190
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTD-------AGLTGLVSLNVSN-SRITSAGL 431
A +T S A N + L +L+ C LTD GLT L LN+S I+ AG+
Sbjct: 191 --AGMTRSAAEGCLNLEYL-TLQDCQK-LTDLSLKHISKGLTKLRVLNLSFCGGISDAGM 246
Query: 432 RHLKPLKNLRSLTLESC 448
HL + +L SL L SC
Sbjct: 247 IHLSHMGSLWSLNLRSC 263
>gi|290976637|ref|XP_002671046.1| predicted protein [Naegleria gruberi]
gi|284084611|gb|EFC38302.1| predicted protein [Naegleria gruberi]
Length = 350
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 146/317 (46%), Gaps = 26/317 (8%)
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N I+++ ++ LINL +L + + + L L KL LNI C IT+ ++ +
Sbjct: 12 NVISSEATQSIGNLINLTELSIGYNDIGYKAVEYLSKLEKLTILNISKCK-ITNLGIESM 70
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL-------EGCP-------------- 215
G+ L SL+IS + + DSG+ L L +LT L++ EGC
Sbjct: 71 IGMKQLTSLEISENGIDDSGVKSLIELSQLTKLDIDHNEIRTEGCKCISQMKNLTDLSVG 130
Query: 216 ---VTAACLDSLSALGSLFYLNLNRCQL-SDDGCEKFSKIGSLKVLNLGFNEITDECLVH 271
+ + + L L L+ + Q+ S DG + + + L LN+G N I D
Sbjct: 131 LNGIDEEGIKFICELKQLTNLSAHAIQIVSVDGVQSITSLKQLISLNIGDNWIGDAGAKV 190
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
+ + L++L + S IG +G +++ + NL L++S +G G + +SGL L + +
Sbjct: 191 ISEMKQLKTLYMHSTLIGIDGTKSISEMTNLTFLDISANNLGDEGAKLISGLNQLIKLWI 250
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
S I + ++ L L L++ I G +L+ L LT LD+ I DSG Y
Sbjct: 251 SEISIGNEGAESISKLEKLTELDVHRNSIETEGAKSLSKLKHLTRLDISENFIEDSGVKY 310
Query: 392 LRNFKNLRSLEICGGGL 408
L K L+ L + G+
Sbjct: 311 LSKMKKLKHLNVYDNGI 327
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 151/327 (46%), Gaps = 29/327 (8%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
+D+ + +L L L+ + C +I++ G+E + G+ LTSL N I G+K+
Sbjct: 36 NDIGYKAVEYLSKLEKLTILNISKC-KITNLGIESMIGMKQLTSLEISEN-GIDDSGVKS 93
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
L L KLD++ + + C CI S + NL L
Sbjct: 94 LIELSQLTKLDIDH-----------------NEIRTEGCKCI--------SQMKNLTDLS 128
Query: 187 ISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA-CLDSLSALGSLFYLNLNRCQLSDDGC 245
+ + + + GI ++ L++LT L+ + + + S+++L L LN+ + D G
Sbjct: 129 VGLNGIDEEGIKFICELKQLTNLSAHAIQIVSVDGVQSITSLKQLISLNIGDNWIGDAGA 188
Query: 246 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
+ S++ LK L + I + + +TNL L++ + +GDEG ++GL L L
Sbjct: 189 KVISEMKQLKTLYMHSTLIGIDGTKSISEMTNLTFLDISANNLGDEGAKLISGLNQLIKL 248
Query: 306 ELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL 365
+S+ +G+ G +S L L +++ I + L+ L L L++ I D+G+
Sbjct: 249 WISEISIGNEGAESISKLEKLTELDVHRNSIETEGAKSLSKLKHLTRLDISENFIEDSGV 308
Query: 366 AALTSLTGLTHLDLFGARITDSGAAYL 392
L+ + L HL+++ I D+G YL
Sbjct: 309 KYLSKMKKLKHLNVYDNGI-DNGNKYL 334
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 121/255 (47%), Gaps = 7/255 (2%)
Query: 203 LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
+ +L L+L +++ S+ L +L L++ + E SK+ L +LN+
Sbjct: 1 MDQLKKLDLISNVISSEATQSIGNLINLTELSIGYNDIGYKAVEYLSKLEKLTILNISKC 60
Query: 263 EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG 322
+IT+ + + G+ L SL + GI D G+ +L L L L++ ++ + G + +S
Sbjct: 61 KITNLGIESMIGMKQLTSLEISENGIDDSGVKSLIELSQLTKLDIDHNEIRTEGCKCISQ 120
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT-GLAALTSLTGLTHLDLFG 381
+ NL +++ GI + ++ + L L +L+ A QI G+ ++TSL L L++
Sbjct: 121 MKNLTDLSVGLNGIDEEGIKFICELKQLTNLSAHAIQIVSVDGVQSITSLKQLISLNIGD 180
Query: 382 ARITDSGAAYLRNFKNLRSLEI------CGGGLTDAGLTGLVSLNVSNSRITSAGLRHLK 435
I D+GA + K L++L + G + + +T L L++S + + G + +
Sbjct: 181 NWIGDAGAKVISEMKQLKTLYMHSTLIGIDGTKSISEMTNLTFLDISANNLGDEGAKLIS 240
Query: 436 PLKNLRSLTLESCKV 450
L L L + +
Sbjct: 241 GLNQLIKLWISEISI 255
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 136/327 (41%), Gaps = 61/327 (18%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N I+ + + L NL L I + + + YL L+KLT+LN+
Sbjct: 12 NVISSEATQSIGNLINLTELSIGYNDIGYKAVEYLSKLEKLTILNI-------------- 57
Query: 226 ALGSLFYLNLNRCQLS------------------------DDGCEKFSKIGSLKVLNLGF 261
++C+++ D G + ++ L L++
Sbjct: 58 ----------SKCKITNLGIESMIGMKQLTSLEISENGIDDSGVKSLIELSQLTKLDIDH 107
Query: 262 NEITDE---CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS-SGL 317
NEI E C+ +K LT+L S+ L+ GI +EG+ + L L L Q+ S G+
Sbjct: 108 NEIRTEGCKCISQMKNLTDL-SVGLN--GIDEEGIKFICELKQLTNLSAHAIQIVSVDGV 164
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
+ ++ L L S+N+ I D + ++ + LK+L + + I G +++ +T LT L
Sbjct: 165 QSITSLKQLISLNIGDNWIGDAGAKVISEMKQLKTLYMHSTLIGIDGTKSISEMTNLTFL 224
Query: 378 DLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGL 431
D+ + D GA + L L I + + G L L L+V + I + G
Sbjct: 225 DISANNLGDEGAKLISGLNQLIKLWISEISIGNEGAESISKLEKLTELDVHRNSIETEGA 284
Query: 432 RHLKPLKNLRSLTLESCKVTANDIKRL 458
+ L LK+L L + + + +K L
Sbjct: 285 KSLSKLKHLTRLDISENFIEDSGVKYL 311
>gi|51850103|dbj|BAD42392.1| leucine-rich repeat protein [Ralstonia solanacearum]
Length = 621
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 166/374 (44%), Gaps = 29/374 (7%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
G+ D+ +A+ S+ S+DLS + + G L D L SL+ + +I D G L
Sbjct: 224 GIGDRAAQALAAS-RSIRSLDLSVNMIGCDGAQALADAP-LVSLNL-YSNEIGDDGARAL 280
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
LTSL RRN I G AFA L KL+L G L G L L++
Sbjct: 281 ATSQTLTSLELRRN-GIGNAGAGAFANNTVLRKLNLANNMIDKRGARVLAGNTSLTELDL 339
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGI------AYLKGLQ------------ 204
N + D + L+G +L SL++ ++++D G+ A L+ L
Sbjct: 340 G-GNRLGDKGARALAGNRSLLSLKVDHNEISDEGVQALAQHATLRSLDLSFNFVGLQGAG 398
Query: 205 ------KLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN 258
+L+ LNL C + + +L+ SL L LN ++ DDG +K +L +L+
Sbjct: 399 ALGGNTRLSELNLSLCGINSYSASALARNKSLASLYLNGNRIGDDGARALAKNSTLTLLD 458
Query: 259 LGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
L N I + L G L SL L GI D+G L L L+LS ++GS G R
Sbjct: 459 LSRNNIQNAGAEALGGNQALISLKLAGNGIDDDGAAALARHPRLTTLDLSQNRIGSEGAR 518
Query: 319 HLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 378
HL+ L ++LS I + L+ + L +L + I + G AL T LT LD
Sbjct: 519 HLAQSATLAELDLSENRIGPEGAKALSLSTVLTTLKVIDNAIGEDGARALADSTSLTSLD 578
Query: 379 LFGARITDSGAAYL 392
I ++GA L
Sbjct: 579 ARRNGIGEAGAQVL 592
>gi|168030611|ref|XP_001767816.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680898|gb|EDQ67330.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 628
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 143/498 (28%), Positives = 225/498 (45%), Gaps = 83/498 (16%)
Query: 20 LTEVSLEAFRDC-ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLK 78
+T+ L + C L+ L L G+ D + +A L +DLS ++V+D GL L
Sbjct: 147 VTDSGLSSLSRCKGLRILGLKYCSGLGDFGIQNVAIGCQRLYIIDLSFTEVSDKGLASLA 206
Query: 79 DCSNLQSLDFNFCIQISDGGLEHLR-GLSNLTSLSFRRNNAITAQGMKAFAGL-INLVKL 136
+L+ L CI ++D GL LR G +L L+ + +++QG+ G + L +L
Sbjct: 207 LLKHLECLSLISCINVTDKGLSCLRNGCKSLQKLNVAKCLNVSSQGIIELTGSSVQLQEL 266
Query: 137 DLERCTRIHGGL-VNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQIS-CSKVT 193
+L C I L + + L L+ + + C I DS++ + SG LK L +S C VT
Sbjct: 267 NLSYCKLISNVLFASFQKLKTLQVVKLDGCV-IGDSNLSLIGSGCIELKELSLSKCQGVT 325
Query: 194 DSGIAYL----KGLQKLTL-----------------------LNLEGCPVTAACLDSLSA 226
D+G+ + GLQKL L L +E C + A + L
Sbjct: 326 DAGVVGVVTSCTGLQKLDLTCCRDITDTALKAVATSCTGLLSLRMENCLLVTA--EGLIM 383
Query: 227 LG-SLFYL---NLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKG-LTNLES 280
+G S YL +L C L+D+G + + L++L +G+ +IT L + TNL
Sbjct: 384 IGKSCVYLEELDLTDCNLNDNGLKSIGRCRGLRLLKVGYCMDITYAGLASIGATCTNLRE 443
Query: 281 LN-LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISD 338
L+ S GI DEG+ + SG L+ +NLS+ + I+D
Sbjct: 444 LDCYRSVGISDEGVAAIA-----------------------SGCKRLKVVNLSYCSSITD 480
Query: 339 GSLRKLAGLSSLKSLNLDA-RQITDTGLAAL-TSLTGLTHLDLFGAR-ITDSGAAYL-RN 394
SL LA LS L L L A QIT G++ + S L LD+ + + D G L R
Sbjct: 481 ASLHSLALLSDLVQLELRACSQITSAGISYIGASCKHLRELDVKRCKFVGDHGVLALSRG 540
Query: 395 FKNLRSLEICGGGLTDAGLTG-----------LVSLNVSNSRITSAGLRHLKPLKNLRSL 443
+NLR + + +TDAG+ LV +NV++S A L LK ++ L
Sbjct: 541 CRNLRQVNLSYTAVTDAGMMAIANMSCIQDMKLVHVNVTSSCFARA-LLACGSLKKVKLL 599
Query: 444 TLESCKVTANDIKRLQSR 461
T + + I++L++R
Sbjct: 600 TGLRIALPSGVIRQLENR 617
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 186/406 (45%), Gaps = 73/406 (17%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
L+ ++ LD + C++++D + L ++ TS AI +G AG +LV+
Sbjct: 53 LRRYPQIECLDLSSCVEVTD---QCLAAVAKFTSSRLISIKAIRTKGF-TIAGFRSLVEC 108
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDS 195
L+ +++ +C + D+++ LS L +L+ L++ SC VTDS
Sbjct: 109 RF------------------LQDVDVTFCTQVGDAEVIALSELRHLQKLKLDSCRDVTDS 150
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 255
G++ L + L +L L+ C S LG N+ GC++ L
Sbjct: 151 GLSSLSRCKGLRILGLKYC----------SGLGDFGIQNVA------IGCQR------LY 188
Query: 256 VLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCN-------LKCLEL 307
+++L F E++D+ L L L +LE L+L SC + D+GL L C KCL +
Sbjct: 189 IIDLSFTEVSDKGLASLALLKHLECLSLISCINVTDKGLSCLRNGCKSLQKLNVAKCLNV 248
Query: 308 SDTQVGSSGLRHLSGLT-NLESINLSFTG-ISDGSLRKLAGLSSLKSLNLDARQITDTGL 365
S S G+ L+G + L+ +NLS+ IS+ L +L+ + LD I D+ L
Sbjct: 249 S-----SQGIIELTGSSVQLQELNLSYCKLISNVLFASFQKLKTLQVVKLDGCVIGDSNL 303
Query: 366 AALTS-LTGLTHLDLFGAR-ITDSGAA-YLRNFKNLRSLEI-CGGGLTDAGL-------T 414
+ + S L L L + +TD+G + + L+ L++ C +TD L T
Sbjct: 304 SLIGSGCIELKELSLSKCQGVTDAGVVGVVTSCTGLQKLDLTCCRDITDTALKAVATSCT 363
Query: 415 GLVSLNVSNS-RITSAGLRHL-KPLKNLRSLTLESCKVTANDIKRL 458
GL+SL + N +T+ GL + K L L L C + N +K +
Sbjct: 364 GLLSLRMENCLLVTAEGLIMIGKSCVYLEELDLTDCNLNDNGLKSI 409
>gi|195150157|ref|XP_002016021.1| GL10712 [Drosophila persimilis]
gi|194109868|gb|EDW31911.1| GL10712 [Drosophila persimilis]
Length = 529
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 189/374 (50%), Gaps = 68/374 (18%)
Query: 7 SQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG 66
S +FN LV R + +V + + R AL+DL LG +L S++LSG
Sbjct: 193 SPSLFNCLV-RRGIKKVQILSLRR-ALKDLVLGV----------------PALTSLNLSG 234
Query: 67 S-DVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGL----EHLRGLSNLTSLSFRRNNAI 119
+V D L H D NL++LD + C QI+D L +HLR NL +L I
Sbjct: 235 CFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGRIAQHLR---NLENLELGGCCNI 291
Query: 120 TAQGMKAFA-GLINLVKLDLERCTRIH-GGLVNLKGL--------MKLESLNIKWCNCIT 169
T G+ A GL L L+L C I G+ +L G ++LE L ++ C ++
Sbjct: 292 TNTGLLLIAWGLKKLRHLNLRSCWHISDQGIGHLAGFSRETAEGNLQLEHLGLQDCQRLS 351
Query: 170 DSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
D + ++ GLT+LKS+ +S C VTDSG+ +L + KL LNL C D++S +
Sbjct: 352 DEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC-------DNISDI 404
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDS 285
G + L++ G S I SL V F ++I+D+ L H+ +GL L SL+L+
Sbjct: 405 GMAY--------LTEGG----SGINSLDV---SFCDKISDQALTHIAQGLYRLRSLSLNQ 449
Query: 286 CGIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSL 341
C I D+G+V + L L+ L + +++ GL+ L+ LTNL++I+L T +S +
Sbjct: 450 CQITDQGMVKIAKSLQELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGI 509
Query: 342 RKLAGLSSLKSLNL 355
+ L L+ LNL
Sbjct: 510 DIIMKLPKLQKLNL 523
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 163/329 (49%), Gaps = 57/329 (17%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAF-----AGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
RG+ + LS RR G+ A +G N+ ++L H V+L L
Sbjct: 203 RGIKKVQILSLRRALKDLVLGVPALTSLNLSGCFNVADMNLG-----HAFSVDLP---NL 254
Query: 158 ESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGC 214
++L++ C ITD+ + ++ L NL++L++ C +T++G+ + GL+KL LNL C
Sbjct: 255 KTLDLSLCKQITDTSLGRIAQHLRNLENLELGGCCNITNTGLLLIAWGLKKLRHLNLRSC 314
Query: 215 PVTA-------ACLDSLSALGSL--FYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A +A G+L +L L CQ LSD+ ++ + SLK +NL F
Sbjct: 315 WHISDQGIGHLAGFSRETAEGNLQLEHLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCV 374
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS 321
+TD L HL + LE LNL SC I D G+ LT G SG+
Sbjct: 375 SVTDSGLKHLARMPKLEQLNLRSCDNISDIGMAYLTE--------------GGSGI---- 416
Query: 322 GLTNLESINLSF-TGISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLD 378
S+++SF ISD +L +A GL L+SL+L+ QITD G+ + SL L +L+
Sbjct: 417 -----NSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDQGMVKIAKSLQELENLN 471
Query: 379 LFG-ARITDSGAAYL-RNFKNLRSLEICG 405
+ +RITD G L + NL+++++ G
Sbjct: 472 IGQCSRITDKGLQTLAEDLTNLKTIDLYG 500
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 112/209 (53%), Gaps = 16/209 (7%)
Query: 69 VTDSGLIHLKDCS--------NLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAI 119
++D G+ HL S L+ L C ++SD L H+ +GL++L S++ ++
Sbjct: 317 ISDQGIGHLAGFSRETAEGNLQLEHLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSV 376
Query: 120 TAQGMKAFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKPLS 177
T G+K A + L +L+L C I G+ L +G + SL++ +C+ I+D + ++
Sbjct: 377 TDSGLKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIA 436
Query: 178 -GLTNLKSLQISCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSA-LGSLFYL 233
GL L+SL ++ ++TD G+ + K LQ+L LN+ C +T L +L+ L +L +
Sbjct: 437 QGLYRLRSLSLNQCQITDQGMVKIAKSLQELENLNIGQCSRITDKGLQTLAEDLTNLKTI 496
Query: 234 NLNRC-QLSDDGCEKFSKIGSLKVLNLGF 261
+L C QLS G + K+ L+ LNLG
Sbjct: 497 DLYGCTQLSSKGIDIIMKLPKLQKLNLGL 525
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 139/273 (50%), Gaps = 44/273 (16%)
Query: 201 KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC-QLSDDGC-EKFS-KIGSLKVL 257
+G++K+ +L+L A D + + +L LNL+ C ++D FS + +LK L
Sbjct: 203 RGIKKVQILSLR-----RALKDLVLGVPALTSLNLSGCFNVADMNLGHAFSVDLPNLKTL 257
Query: 258 NLGF-NEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLEL-SDTQV 312
+L +ITD L + + L NLE+L L C I + GL+ + GL L+ L L S +
Sbjct: 258 DLSLCKQITDTSLGRIAQHLRNLENLELGGCCNITNTGLLLIAWGLKKLRHLNLRSCWHI 317
Query: 313 GSSGLRHLSGLT------NLESINLSFTG---ISDGSLRKLA-GLSSLKSLNLD-ARQIT 361
G+ HL+G + NL+ +L +SD +L +A GL+SLKS+NL +T
Sbjct: 318 SDQGIGHLAGFSRETAEGNLQLEHLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVT 377
Query: 362 DTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLN 420
D+GL L + L L+L I+D G AYL T+ G +G+ SL+
Sbjct: 378 DSGLKHLARMPKLEQLNLRSCDNISDIGMAYL----------------TEGG-SGINSLD 420
Query: 421 VSN-SRITSAGLRHL-KPLKNLRSLTLESCKVT 451
VS +I+ L H+ + L LRSL+L C++T
Sbjct: 421 VSFCDKISDQALTHIAQGLYRLRSLSLNQCQIT 453
>gi|290976253|ref|XP_002670855.1| predicted protein [Naegleria gruberi]
gi|284084418|gb|EFC38111.1| predicted protein [Naegleria gruberi]
Length = 286
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 121/245 (49%)
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
CN + D +S L SL + +++ +G + +++LT LN++ V S+
Sbjct: 11 CNQLGDESAHKISQFKQLTSLGVENNEIGPTGAKSISTMKQLTSLNIKNNSVGVEGAHSI 70
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
S + L +L+++ + D+G + ++ L LN+ +N+IT ++ K + L LN+
Sbjct: 71 SNMTRLTHLDISLNNIGDEGAKIICQLKQLTNLNISYNQITSNGMIPFKEMKQLIILNVG 130
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
S IG+EG+ N++GL L L++ G+ G + +S LTNL + I + + +
Sbjct: 131 SNRIGNEGIENISGLSQLTELDIGGCDFGNEGAKSISQLTNLTCLYCCSNNIREEGAKSI 190
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
+ L + LNL + G ++ + LTHL + I D GA L +NL+ L I
Sbjct: 191 SQLEKVTCLNLCVNYLHADGAKHISQMKQLTHLYMDSNEIGDDGAEDLCGLENLKVLSIR 250
Query: 405 GGGLT 409
G ++
Sbjct: 251 GNNIS 255
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 6/230 (2%)
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC 286
+ L L+L QL D+ K S+ L L + NEI + + L SLN+ +
Sbjct: 1 MSQLTELSLECNQLGDESAHKISQFKQLTSLGVENNEIGPTGAKSISTMKQLTSLNIKNN 60
Query: 287 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAG 346
+G EG +++ + L L++S +G G + + L L ++N+S+ I+ +
Sbjct: 61 SVGVEGAHSISNMTRLTHLDISLNNIGDEGAKIICQLKQLTNLNISYNQITSNGMIPFKE 120
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG 406
+ L LN+ + +I + G+ ++ L+ LT LD+ G + GA + NL L C
Sbjct: 121 MKQLIILNVGSNRIGNEGIENISGLSQLTELDIGGCDFGNEGAKSISQLTNLTCLYCCSN 180
Query: 407 GLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
+ + G L + LN+ + + + G +H+ +K L L ++S ++
Sbjct: 181 NIREEGAKSISQLEKVTCLNLCVNYLHADGAKHISQMKQLTHLYMDSNEI 230
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 2/271 (0%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW 164
+S LT LS N + + + L L +E G ++ + +L SLNIK
Sbjct: 1 MSQLTELSLECN-QLGDESAHKISQFKQLTSLGVENNEIGPTGAKSISTMKQLTSLNIKN 59
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
N + +S +T L L IS + + D G + L++LT LN+ +T+ +
Sbjct: 60 -NSVGVEGAHSISNMTRLTHLDISLNNIGDEGAKIICQLKQLTNLNISYNQITSNGMIPF 118
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
+ L LN+ ++ ++G E S + L L++G + +E + LTNL L
Sbjct: 119 KEMKQLIILNVGSNRIGNEGIENISGLSQLTELDIGGCDFGNEGAKSISQLTNLTCLYCC 178
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
S I +EG +++ L + CL L + + G +H+S + L + + I D L
Sbjct: 179 SNNIREEGAKSISQLEKVTCLNLCVNYLHADGAKHISQMKQLTHLYMDSNEIGDDGAEDL 238
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLT 375
GL +LK L++ I+ + A+ L T
Sbjct: 239 CGLENLKVLSIRGNNISYDMVQAIHELGKFT 269
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 124/275 (45%), Gaps = 9/275 (3%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
++ L L + C+++ D + ++LT L +E + S+S + L LN+
Sbjct: 1 MSQLTELSLECNQLGDESAHKISQFKQLTSLGVENNEIGPTGAKSISTMKQLTSLNIKNN 60
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDE---CLVHLKGLTNLESLNLDSCGIGDEGLVN 295
+ +G S + L L++ N I DE + LK LTNL N+ I G++
Sbjct: 61 SVGVEGAHSISNMTRLTHLDISLNNIGDEGAKIICQLKQLTNL---NISYNQITSNGMIP 117
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
+ L L + ++G+ G+ ++SGL+ L +++ + + ++ L++L L
Sbjct: 118 FKEMKQLIILNVGSNRIGNEGIENISGLSQLTELDIGGCDFGNEGAKSISQLTNLTCLYC 177
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG--- 412
+ I + G +++ L +T L+L + GA ++ K L L + + D G
Sbjct: 178 CSNNIREEGAKSISQLEKVTCLNLCVNYLHADGAKHISQMKQLTHLYMDSNEIGDDGAED 237
Query: 413 LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 447
L GL +L V + R + ++ + L T+ES
Sbjct: 238 LCGLENLKVLSIRGNNISYDMVQAIHELGKFTVES 272
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
++ L ++L + D S K++ L SL ++ +I TG +++++ LT L++
Sbjct: 1 MSQLTELSLECNQLGDESAHKISQFKQLTSLGVENNEIGPTGAKSISTMKQLTSLNIKNN 60
Query: 383 RITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKP 436
+ GA + N L L+I + D G L L +LN+S ++ITS G+ K
Sbjct: 61 SVGVEGAHSISNMTRLTHLDISLNNIGDEGAKIICQLKQLTNLNISYNQITSNGMIPFKE 120
Query: 437 LKNLRSLTLESCKVTANDIKRL 458
+K L L + S ++ I+ +
Sbjct: 121 MKQLIILNVGSNRIGNEGIENI 142
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 3/179 (1%)
Query: 52 IASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSL 111
I Q L ++++S + +T +G+I K+ L L+ +I + G+E++ GLS LT L
Sbjct: 93 IICQLKQLTNLNISYNQITSNGMIPFKEMKQLIILNVG-SNRIGNEGIENISGLSQLTEL 151
Query: 112 SFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDS 171
+ +G K+ + L NL L G ++ L K+ LN+ N +
Sbjct: 152 DIGGCD-FGNEGAKSISQLTNLTCLYCCSNNIREEGAKSISQLEKVTCLNL-CVNYLHAD 209
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
K +S + L L + +++ D G L GL+ L +L++ G ++ + ++ LG
Sbjct: 210 GAKHISQMKQLTHLYMDSNEIGDDGAEDLCGLENLKVLSIRGNNISYDMVQAIHELGKF 268
>gi|320165418|gb|EFW42317.1| tyrosine-protein kinase CSK [Capsaspora owczarzaki ATCC 30864]
Length = 953
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 130/297 (43%), Gaps = 7/297 (2%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N IT +GLT L L + +++T GL LT L +T+ D+ +
Sbjct: 9 NPITSIPTNAFTGLTALTELSLLYNQITGISAGTFTGLTALTALYFASNQITSIPADAFT 68
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD-ECLVHLKGLTNLESLNLD 284
L +L +L+L Q++ F+ + +L L+L +N+IT LT L L+LD
Sbjct: 69 GLTALTHLSLQYNQITSISGTAFTSLTALTYLSLQYNQITSISGTAFTFNLTALTYLSLD 128
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
S I + TGL L L L Q+ S + +GLT L S+ L I+
Sbjct: 129 SNQITSIPVGAFTGLTALTYLSLYTNQITSISVNAFTGLTALASLVLQNNQITSIPAAAC 188
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
GL +L L+L QIT A T LT LT+L + +IT A + L L +
Sbjct: 189 TGLPALTELSLGINQITSIPADAFTGLTALTYLSVENNQITSIPAGAFTDLAALTDLHLD 248
Query: 405 GGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 455
G +T GLT L +L + N+ IT+ K L N +L+L + N+
Sbjct: 249 GNQITSIPDFSFTGLTALTTLALQNNPITTLPPGLFKGLPNALALSLSYPYLAPNNF 305
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 132/298 (44%), Gaps = 14/298 (4%)
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVNLKGLMKLESLNIKWCNCITD 170
+ +N IT+ AF GL L +L L + T I G GL L +L N IT
Sbjct: 5 YINSNPITSIPTNAFTGLTALTELSLLYNQITGISAG--TFTGLTALTALYFA-SNQITS 61
Query: 171 SDMKPLSGLTNLKSLQISCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA-LG 228
+GLT L L + +++T SG A+ L LT L+L+ +T+ + + L
Sbjct: 62 IPADAFTGLTALTHLSLQYNQITSISGTAF-TSLTALTYLSLQYNQITSISGTAFTFNLT 120
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
+L YL+L+ Q++ F+ + +L L+L N+IT + GLT L SL L + I
Sbjct: 121 ALTYLSLDSNQITSIPVGAFTGLTALTYLSLYTNQITSISVNAFTGLTALASLVLQNNQI 180
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI---NLSFTGISDGSLRKLA 345
TGL L L L Q+ S +GLT L + N T I G+ LA
Sbjct: 181 TSIPAAACTGLPALTELSLGINQITSIPADAFTGLTALTYLSVENNQITSIPAGAFTDLA 240
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
L+ L +LD QIT + T LT LT L L IT + N +L +
Sbjct: 241 ALTDL---HLDGNQITSIPDFSFTGLTALTTLALQNNPITTLPPGLFKGLPNALALSL 295
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 109/245 (44%), Gaps = 9/245 (3%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLV- 149
QI+ + GL+ LT LS + N IT+ AF L L L L+ + T I G
Sbjct: 58 QITSIPADAFTGLTALTHLSLQYNQ-ITSISGTAFTSLTALTYLSLQYNQITSISGTAFT 116
Query: 150 -NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTL 208
NL L L SL+ N IT + +GLT L L + +++T + GL L
Sbjct: 117 FNLTALTYL-SLD---SNQITSIPVGAFTGLTALTYLSLYTNQITSISVNAFTGLTALAS 172
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
L L+ +T+ + + L +L L+L Q++ + F+ + +L L++ N+IT
Sbjct: 173 LVLQNNQITSIPAAACTGLPALTELSLGINQITSIPADAFTGLTALTYLSVENNQITSIP 232
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
L L L+LD I + TGL L L L + + + GL N +
Sbjct: 233 AGAFTDLAALTDLHLDGNQITSIPDFSFTGLTALTTLALQNNPITTLPPGLFKGLPNALA 292
Query: 329 INLSF 333
++LS+
Sbjct: 293 LSLSY 297
>gi|157865941|ref|XP_001681677.1| putative surface antigen protein [Leishmania major strain Friedlin]
gi|68124975|emb|CAJ02737.1| putative surface antigen protein [Leishmania major strain Friedlin]
Length = 776
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 192/407 (47%), Gaps = 11/407 (2%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ SL +++L G+ V+ + +L++L+ Q+S +++L +L+
Sbjct: 251 SEMKSLTNLELEGTQVSGTLPPGWSSIKSLRTLNLE-GTQVSGSLPPEWVSMASLRTLNL 309
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMK-LESLNIKWCNCITDSD 172
++ ++ + +L L+LE T++ G L MK L +LN++ ++ S
Sbjct: 310 E-GTQVSGTLPPGWSEMKSLTSLELE-GTQVSGTLPPRWSEMKSLRTLNLE-GTQVSGSL 366
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
+ +L++L + ++V+ S + L LNLEG V+ S + SL
Sbjct: 367 PPQWVSMASLRTLNLEGTQVSGSLPPEWVSMASLRTLNLEGTQVSGTLPPGWSEMKSLTS 426
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L L Q+S ++S++ SL+ LNL +++ + +L +LNL+ +
Sbjct: 427 LELEGTQVSGTLPPRWSEMKSLRTLNLEGTQVSGSLPPEWVSMASLRTLNLEGTQVSGTL 486
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
+ + +L LEL TQV + S + +L ++NL T +S + ++SL++
Sbjct: 487 PPGWSEMKSLTSLELEGTQVSGTLPPRWSEMKSLRTLNLEGTQVSGSLPPEWVSMASLRT 546
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
LNL+ Q++ T + + LT L+L G +++ + K+LR+L + G ++ A
Sbjct: 547 LNLEGTQVSGTLPPGWSEMKSLTSLELEGTQVSGTLPPRWSEMKSLRTLNLEGTQVSGAL 606
Query: 413 LTG------LVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAN 453
G L +L + ++++ + + +K+L +L LE +V+ +
Sbjct: 607 PPGWGEMKSLTNLYLEGTQLSGSLPTEWRGMKSLTNLYLEGTQVSGS 653
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 198/468 (42%), Gaps = 46/468 (9%)
Query: 6 ISQQIF---NELVYSRCLTEVSLEA-FRDCALQDLCLGQYP----GVNDKWMDVIASQGS 57
+S +F N Y+ L E+ + +R ++DL P + D W SQ
Sbjct: 78 VSVNVFVGLNVSTYAGTLPEIPVNVDYRHVMIRDLGFWNMPLLSGTLPDSW-----SQLG 132
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
LLSV LSG V+ + L+ L C HL G +L SL
Sbjct: 133 GLLSVTLSGCGVSGTLPASWGLMVRLRELTVRDC--------RHLTG--SLPSL------ 176
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGL-VNLKGLMKLESLNIKWCNCITDSDMKPL 176
++ L NL KL L R ++ G L + L L I IT +
Sbjct: 177 ---------WSWLPNLQKLVL-RQLQLSGTLPAEWSRVTSLLELEIVAAGDITGTLPPEW 226
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
S + +L++L + ++V+ + ++ LT L LEG V+ S++ SL LNL
Sbjct: 227 SSIKSLRTLNLEGTQVSGTLPPGWSEMKSLTNLELEGTQVSGTLPPGWSSIKSLRTLNLE 286
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
Q+S ++ + SL+ LNL +++ + +L SL L+ +
Sbjct: 287 GTQVSGSLPPEWVSMASLRTLNLEGTQVSGTLPPGWSEMKSLTSLELEGTQVSGTLPPRW 346
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
+ + +L+ L L TQV S + +L ++NL T +S + ++SL++LNL+
Sbjct: 347 SEMKSLRTLNLEGTQVSGSLPPQWVSMASLRTLNLEGTQVSGSLPPEWVSMASLRTLNLE 406
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG----GGLTD-- 410
Q++ T + + LT L+L G +++ + K+LR+L + G G L
Sbjct: 407 GTQVSGTLPPGWSEMKSLTSLELEGTQVSGTLPPRWSEMKSLRTLNLEGTQVSGSLPPEW 466
Query: 411 AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
+ L +LN+ ++++ +K+L SL LE +V+ R
Sbjct: 467 VSMASLRTLNLEGTQVSGTLPPGWSEMKSLTSLELEGTQVSGTLPPRW 514
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 163/364 (44%), Gaps = 27/364 (7%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ SL S++L G+ V+ + + +L++L+ Q+S +++L +L+
Sbjct: 323 SEMKSLTSLELEGTQVSGTLPPRWSEMKSLRTLNLE-GTQVSGSLPPQWVSMASLRTLNL 381
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHG----GLVNLKGLMKLE--------SLN 161
++ + + +L L+LE T++ G G +K L LE +L
Sbjct: 382 E-GTQVSGSLPPEWVSMASLRTLNLE-GTQVSGTLPPGWSEMKSLTSLELEGTQVSGTLP 439
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 221
+W S+MK +L++L + ++V+ S + L LNLEG V+
Sbjct: 440 PRW------SEMK------SLRTLNLEGTQVSGSLPPEWVSMASLRTLNLEGTQVSGTLP 487
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
S + SL L L Q+S ++S++ SL+ LNL +++ + +L +L
Sbjct: 488 PGWSEMKSLTSLELEGTQVSGTLPPRWSEMKSLRTLNLEGTQVSGSLPPEWVSMASLRTL 547
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 341
NL+ + + + +L LEL TQV + S + +L ++NL T +S
Sbjct: 548 NLEGTQVSGTLPPGWSEMKSLTSLELEGTQVSGTLPPRWSEMKSLRTLNLEGTQVSGALP 607
Query: 342 RKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
+ SL +L L+ Q++ + + LT+L L G +++ S + +LR+L
Sbjct: 608 PGWGEMKSLTNLYLEGTQLSGSLPTEWRGMKSLTNLYLEGTQVSGSLPPQWSSLTSLRTL 667
Query: 402 EICG 405
++ G
Sbjct: 668 DLEG 671
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 154/336 (45%), Gaps = 11/336 (3%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ SL +++L G+ V+ S ++L++L+ Q+S +++L +L+
Sbjct: 347 SEMKSLRTLNLEGTQVSGSLPPQWVSMASLRTLNLE-GTQVSGSLPPEWVSMASLRTLNL 405
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMK-LESLNIKWCNCITDSD 172
++ ++ + +L L+LE T++ G L MK L +LN++ ++ S
Sbjct: 406 E-GTQVSGTLPPGWSEMKSLTSLELE-GTQVSGTLPPRWSEMKSLRTLNLE-GTQVSGSL 462
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
+ +L++L + ++V+ + ++ LT L LEG V+ S + SL
Sbjct: 463 PPEWVSMASLRTLNLEGTQVSGTLPPGWSEMKSLTSLELEGTQVSGTLPPRWSEMKSLRT 522
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
LNL Q+S ++ + SL+ LNL +++ + +L SL L+ +
Sbjct: 523 LNLEGTQVSGSLPPEWVSMASLRTLNLEGTQVSGTLPPGWSEMKSLTSLELEGTQVSGTL 582
Query: 293 LVNLTGLCNLKCLELSDTQVG---SSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 349
+ + +L+ L L TQV G + LTNL L T +S + G+ S
Sbjct: 583 PPRWSEMKSLRTLNLEGTQVSGALPPGWGEMKSLTNL---YLEGTQLSGSLPTEWRGMKS 639
Query: 350 LKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L +L L+ Q++ + +SLT L LDL G +++
Sbjct: 640 LTNLYLEGTQVSGSLPPQWSSLTSLRTLDLEGTQVS 675
>gi|430741732|ref|YP_007200861.1| hypothetical protein Sinac_0756 [Singulisphaera acidiphila DSM
18658]
gi|430013452|gb|AGA25166.1| hypothetical protein Sinac_0756 [Singulisphaera acidiphila DSM
18658]
Length = 304
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 99/183 (54%), Gaps = 6/183 (3%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD+GL L L+ + + F ++++ GL HL+G ++L SL R IT +G+ A
Sbjct: 113 MTDTGLAQLGGLPRLRQV-YCFKPKVTNAGLAHLKGATHLVSLELLRVPEITDEGLVHLA 171
Query: 129 GLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
GL NL KL+L RI G GL +L L +L +L + TD+ + L TNLK L +
Sbjct: 172 GLTNLEKLNLS-GARIAGPGLPHLARLGRLRTLVL---GSTTDAGLAQLGRFTNLKQLYL 227
Query: 188 SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEK 247
K TD+G+A L L+ LT L LE +T A L ++ L +L L+L +S EK
Sbjct: 228 GTGKYTDAGLAELSKLRSLTELGLEAGDLTEAVLIHVAGLPNLERLDLGGAPVSQAAIEK 287
Query: 248 FSK 250
F +
Sbjct: 288 FKR 290
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
I+D L L+ L + +TD+G+A L GL +L + VT A L L
Sbjct: 89 ISDEAFTALGMFDQLQELTMVVGVMTDTGLAQLGGLPRLRQVYCFKPKVTNAGLAHLKGA 148
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
L L L R EITDE LVHL GLTNLE LNL
Sbjct: 149 THLVSLELLRVP-----------------------EITDEGLVHLAGLTNLEKLNLSGAR 185
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
I GL +L L L+ L L T +GL L TNL+ + L +D L +L+ L
Sbjct: 186 IAGPGLPHLARLGRLRTLVLGSTT--DAGLAQLGRFTNLKQLYLGTGKYTDAGLAELSKL 243
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRS 400
SL L L+A +T+ L + L L LDL GA ++ A + FK R
Sbjct: 244 RSLTELGLEAGDLTEAVLIHVAGLPNLERLDLGGAPVSQ---AAIEKFKRARP 293
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 3/205 (1%)
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
L P++ +L L L + ++D G + + L+ + ++T+ L
Sbjct: 83 TLPQVPISDEAFTALGMFDQLQELTMVVGVMTDTGLAQLGGLPRLRQVYCFKPKVTNAGL 142
Query: 270 VHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
HLKG T+L SL L I DEGLV+L GL NL+ L LS ++ GL HL+ L L +
Sbjct: 143 AHLKGATHLVSLELLRVPEITDEGLVHLAGLTNLEKLNLSGARIAGPGLPHLARLGRLRT 202
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG 388
+ L T +D L +L ++LK L L + TD GLA L+ L LT L L +T++
Sbjct: 203 LVLGST--TDAGLAQLGRFTNLKQLYLGTGKYTDAGLAELSKLRSLTELGLEAGDLTEAV 260
Query: 389 AAYLRNFKNLRSLEICGGGLTDAGL 413
++ NL L++ G ++ A +
Sbjct: 261 LIHVAGLPNLERLDLGGAPVSQAAI 285
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 102/215 (47%), Gaps = 9/215 (4%)
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
GS+ L + +SD+ L+ L + +TD L L GL L +
Sbjct: 77 GSINPATLPQVPISDEAFTALGMFDQLQELTMVVGVMTDTGLAQLGGLPRLRQVYCFKPK 136
Query: 288 IGDEGLVNLTGLCNLKCLE-LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAG 346
+ + GL +L G +L LE L ++ GL HL+GLTNLE +NLS I+ L LA
Sbjct: 137 VTNAGLAHLKGATHLVSLELLRVPEITDEGLVHLAGLTNLEKLNLSGARIAGPGLPHLAR 196
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG 406
L L++L L + TD GLA L T L L L + TD+G A L ++L L + G
Sbjct: 197 LGRLRTLVLGS--TTDAGLAQLGRFTNLKQLYLGTGKYTDAGLAELSKLRSLTELGLEAG 254
Query: 407 GLTD------AGLTGLVSLNVSNSRITSAGLRHLK 435
LT+ AGL L L++ + ++ A + K
Sbjct: 255 DLTEAVLIHVAGLPNLERLDLGGAPVSQAAIEKFK 289
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 103/222 (46%), Gaps = 10/222 (4%)
Query: 252 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ 311
GS+ L I+DE L L+ L + + D GL L GL L+ + +
Sbjct: 77 GSINPATLPQVPISDEAFTALGMFDQLQELTMVVGVMTDTGLAQLGGLPRLRQVYCFKPK 136
Query: 312 VGSSGLRHLSGLTNLESIN-LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
V ++GL HL G T+L S+ L I+D L LAGL++L+ LNL +I GL L
Sbjct: 137 VTNAGLAHLKGATHLVSLELLRVPEITDEGLVHLAGLTNLEKLNLSGARIAGPGLPHLAR 196
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT------GLVSLNVSNS 424
L L L L TD+G A L F NL+ L + G TDAGL L L +
Sbjct: 197 LGRLRTLVL--GSTTDAGLAQLGRFTNLKQLYLGTGKYTDAGLAELSKLRSLTELGLEAG 254
Query: 425 RITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
+T A L H+ L NL L L V+ I++ + R P +
Sbjct: 255 DLTEAVLIHVAGLPNLERLDLGGAPVSQAAIEKFK-RARPQV 295
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
++TD GL+HL +NL+ L+ + +I+ GL HL L L +L + T G+
Sbjct: 160 PEITDEGLVHLAGLTNLEKLNLSGA-RIAGPGLPHLARLGRLRTLVL---GSTTDAGLAQ 215
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
NL +L L GL L L L L ++ +T++ + ++GL NL+ L
Sbjct: 216 LGRFTNLKQLYLGTGKYTDAGLAELSKLRSLTELGLE-AGDLTEAVLIHVAGLPNLERLD 274
Query: 187 ISCSKVTDSGIAYLK 201
+ + V+ + I K
Sbjct: 275 LGGAPVSQAAIEKFK 289
>gi|320167107|gb|EFW44006.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 624
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 112/238 (47%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N IT +GLT L L + +++T GL LT L +T+ D+ +
Sbjct: 68 NSITSISANAFTGLTALTYLSLQYNQITGIPAGTFTGLTALTALFFAYNQITSIPADTFT 127
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
L SL YL+L Q++ F+ + +L L+LG N+IT GLT L +L+L +
Sbjct: 128 GLTSLTYLSLQNNQVTSISGTAFTGLTALTSLSLGPNQITSIPADTFTGLTALTTLSLQN 187
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
I TGL L CL Q+ S +G+T+L ++L I+ S A
Sbjct: 188 NQITSISGTAFTGLTALTCLYFGSNQITSIPAGAFTGMTSLTYLSLYLNKITSISANAFA 247
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
GL++L L+L +IT + A T LTGLT L L G +IT ++ N L +L +
Sbjct: 248 GLTALTYLSLFNNKITSIPVGAFTGLTGLTDLYLDGNQITSIPSSSFTNLTALTALAL 305
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 118/263 (44%), Gaps = 22/263 (8%)
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
+T+ ++ + L +L YL+L Q++ F+ + +L L +N+IT GL
Sbjct: 70 ITSISANAFTGLTALTYLSLQYNQITGIPAGTFTGLTALTALFFAYNQITSIPADTFTGL 129
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 335
T+L L+L + + TGL L L L Q+ S +GLT L +++L
Sbjct: 130 TSLTYLSLQNNQVTSISGTAFTGLTALTSLSLGPNQITSIPADTFTGLTALTTLSLQNNQ 189
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGA------ 389
I+ S GL++L L + QIT A T +T LT+L L+ +IT A
Sbjct: 190 ITSISGTAFTGLTALTCLYFGSNQITSIPAGAFTGMTSLTYLSLYLNKITSISANAFAGL 249
Query: 390 ---AYLRNFKN-LRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
YL F N + S+ + G T GLTGL L + ++ITS L L +L L
Sbjct: 250 TALTYLSLFNNKITSIPV--GAFT--GLTGLTDLYLDGNQITSIPSSSFTNLTALTALAL 305
Query: 446 ESCKVTANDIKRLQS---RDLPN 465
++ N I L + LPN
Sbjct: 306 QN-----NPITTLPPGLFKGLPN 323
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 122/284 (42%), Gaps = 31/284 (10%)
Query: 117 NAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N+IT+ AF GL L L L+ + T I G GL L +L + N IT
Sbjct: 68 NSITSISANAFTGLTALTYLSLQYNQITGIPAG--TFTGLTALTALFFAY-NQITSIPAD 124
Query: 175 PLSGLTNLKSLQISCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
+GLT+L L + ++VT SG A+ GL LT L+L +T+ D+ + L +L L
Sbjct: 125 TFTGLTSLTYLSLQNNQVTSISGTAF-TGLTALTSLSLGPNQITSIPADTFTGLTALTTL 183
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+L Q++ F+ + +L L G N+IT G+T+L L+L I
Sbjct: 184 SLQNNQITSISGTAFTGLTALTCLYFGSNQITSIPAGAFTGMTSLTYLSLYLNKI----- 238
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
T + ++ L+ LT L N T I G+ L GL+ L
Sbjct: 239 ----------------TSISANAFAGLTALTYLSLFNNKITSIPVGAFTGLTGLTDLY-- 280
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
LD QIT ++ T+LT LT L L IT + N
Sbjct: 281 -LDGNQITSIPSSSFTNLTALTALALQNNPITTLPPGLFKGLPN 323
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 68/145 (46%), Gaps = 6/145 (4%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVN 150
QI+ + GL+ LT+LS + NN IT+ AF GL L L + T I G
Sbjct: 165 QITSIPADTFTGLTALTTLSLQ-NNQITSISGTAFTGLTALTCLYFGSNQITSIPAGA-- 221
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
G+ L L++ + N IT +GLT L L + +K+T + GL LT L
Sbjct: 222 FTGMTSLTYLSL-YLNKITSISANAFAGLTALTYLSLFNNKITSIPVGAFTGLTGLTDLY 280
Query: 211 LEGCPVTAACLDSLSALGSLFYLNL 235
L+G +T+ S + L +L L L
Sbjct: 281 LDGNQITSIPSSSFTNLTALTALAL 305
>gi|29823176|emb|CAD15503.2| probable lrr-gala family type III effector protein (gala 5)
[Ralstonia solanacearum GMI1000]
Length = 538
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 186/435 (42%), Gaps = 62/435 (14%)
Query: 1 MLPRDISQQI--------FNELVYSRCLTEVSLEA-FRDCALQD-------LCLGQYPGV 44
LP DI ++I L + + ++EA R+ ++D L G YP
Sbjct: 66 QLPPDIFREIARRSDPLTVQRLRVASKPVKAAIEADMRELVIKDRAGLAGVLRAGNYP-- 123
Query: 45 NDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI-QISDGGLEHLR 103
+L + L+G+ TD L L ++L++LD + C I+ G+ HL
Sbjct: 124 -------------ALEKLTLAGT-FTDDDLRGLP--ASLKALDLSRCRGSITAAGIAHLS 167
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
L L L+ R N I A+G + A L L++ G L +L +LN+
Sbjct: 168 RLP-LVRLNVR-NKRIGAEGARLLANHPTLTSLNVSNGRIGPEGAQALAANTRLTTLNVS 225
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
N I + K L+ L+SL +S +++ D G L AAC
Sbjct: 226 -GNRIGVAGAKALAANQTLRSLDVSDNRIGDEGAREL-----------------AACTQ- 266
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
L L+ NR + DG + +L L +G NEI D ++ L L +LN+
Sbjct: 267 ------LTTLDANRNGIGVDGATALAASRTLTSLAIGGNEIGDAGVLALAANARLTTLNV 320
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
+S G+G +G+ L L L L +G++G L+ T+L +++L + I +
Sbjct: 321 ESTGVGADGVKALAASKTLTWLRLDGNDIGNAGATALAASTSLTTLHLEHSRIGAEGAQA 380
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
LA + L +L+L I D G+ AL++ L L + + D+ A L K L +L+I
Sbjct: 381 LAANTKLTTLDLGYNDIGDAGVRALSANATLVWLSVRRNNLEDASAVSLAAGKTLTTLDI 440
Query: 404 CGGGLTDAGLTGLVS 418
G G+ D G L +
Sbjct: 441 SGNGIQDQGAKALAA 455
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 3/276 (1%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
+L S+D+S + + D G L C+ L +LD N I G L LTSL+ N
Sbjct: 242 TLRSLDVSDNRIGDEGARELAACTQLTTLDANRN-GIGVDGATALAASRTLTSLAIG-GN 299
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS 177
I G+ A A L L++E G+ L L L + N I ++ L+
Sbjct: 300 EIGDAGVLALAANARLTTLNVESTGVGADGVKALAASKTLTWLRLD-GNDIGNAGATALA 358
Query: 178 GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
T+L +L + S++ G L KLT L+L + A + +LSA +L +L++ R
Sbjct: 359 ASTSLTTLHLEHSRIGAEGAQALAANTKLTTLDLGYNDIGDAGVRALSANATLVWLSVRR 418
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
L D + +L L++ N I D+ L L +L++ S I + G L
Sbjct: 419 NNLEDASAVSLAAGKTLTTLDISGNGIQDQGAKALAANPTLTTLDVSSNDIKNAGARALA 478
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
L L+L + ++ SG R L L S+ +S
Sbjct: 479 ANARLVSLDLRNNRMEESGTRALLANRTLSSLGVSL 514
>gi|428163352|gb|EKX32427.1| hypothetical protein GUITHDRAFT_121393 [Guillardia theta CCMP2712]
Length = 1894
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 161/355 (45%), Gaps = 8/355 (2%)
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
GL++L +L + +N +T+ F GL +L L L GL L++L +
Sbjct: 472 GLASLQTL-YLYDNELTSIPATGFNGLASLQTLYLSSNELTSIPETVFAGLASLQTLYLS 530
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
N +T +GL +L++L +S +++T GL L L L +T+
Sbjct: 531 -GNELTSVPETVFAGLASLQTLYLSGNELTSVPETVFAGLASLQTLYLSSNELTSIPETV 589
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
+ L SL YL L+ +L+ F+ + SL+ L L +NE+T GL +L++L L
Sbjct: 590 FAGLASLQYLYLSSNKLTSVPETVFAGLASLQTLYLSYNELTSVPETVFNGLASLQTLYL 649
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
+ GL +L+ L L D ++ S +GL +L S++L F ++
Sbjct: 650 SYNKLTSVPATVFAGLASLRSLGLYDNKLTSVPATVFAGLASLRSLSLDFNELTSIPETV 709
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
AGL+SL++L L ++T L L +L L ++T ++++L +
Sbjct: 710 FAGLTSLQTLYLYDNELTSVPETVFNGLASLQYLYLDNNKLTSIPETVFAGLASVQTLYL 769
Query: 404 CGGGLTDA------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
G LT GL L LNVS++ +TS L +L++L L K+T+
Sbjct: 770 SGNELTSVPETVFNGLASLQYLNVSSNELTSVPETVFDGLASLQTLDLSYNKLTS 824
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 6/293 (2%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N +T +GL +L+ L +S +K+T GL + +L L G +T+ +
Sbjct: 100 NKLTSVPATVFAGLASLQYLYLSSNKLTSIPETVFAGLASIRVLILSGNELTSVPETVFA 159
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
L SL YL L+ +L+ F+ + SL+ L L N++T GL +L SL LD+
Sbjct: 160 GLASLQYLYLDNNKLTSVPATVFNGLASLQTLYLSSNKLTSVPETVFNGLASLRSLYLDN 219
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
+ GL +L+ L L D ++ S +GL +L+++ LS+ ++
Sbjct: 220 NELTSVPETVFAGLASLQTLYLYDNELTSIPATVFAGLASLQTLYLSYNKLTSVPETVFD 279
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
GL+SL+SL L ++T L L +L L ++T A +L++L + G
Sbjct: 280 GLASLRSLYLSYNELTSVPETVFDGLASLQYLYLSSNKLTSVPATVFAGLTSLQTLYLSG 339
Query: 406 GGLTDA------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
LT GL L +L +S++++TS L +L++L L S K+T+
Sbjct: 340 NELTSVPETVFTGLASLQTLYLSSNKLTSVPETVFNGLASLQTLYLSSNKLTS 392
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 158/355 (44%), Gaps = 8/355 (2%)
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
GL++L SL + N +T+ F GL +L L L GL L++L +
Sbjct: 280 GLASLRSL-YLSYNELTSVPETVFDGLASLQYLYLSSNKLTSVPATVFAGLTSLQTLYLS 338
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
N +T +GL +L++L +S +K+T GL L L L +T+
Sbjct: 339 -GNELTSVPETVFTGLASLQTLYLSSNKLTSVPETVFNGLASLQTLYLSSNKLTSVPATV 397
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
+ L SL YL L +L+ F+ + SL+ L L N++T GL +L++L L
Sbjct: 398 FAGLASLQYLYLYDNELTSIPATVFAGLTSLQSLYLSSNKLTSVPETVFDGLASLQTLYL 457
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
S + GL +L+ L L D ++ S +GL +L+++ LS ++
Sbjct: 458 SSNKLTSVPATVFNGLASLQTLYLYDNELTSIPATGFNGLASLQTLYLSSNELTSIPETV 517
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
AGL+SL++L L ++T L L L L G +T +L++L +
Sbjct: 518 FAGLASLQTLYLSGNELTSVPETVFAGLASLQTLYLSGNELTSVPETVFAGLASLQTLYL 577
Query: 404 CGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
LT AGL L L +S++++TS L +L++L L ++T+
Sbjct: 578 SSNELTSIPETVFAGLASLQYLYLSSNKLTSVPETVFAGLASLQTLYLSYNELTS 632
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 159/355 (44%), Gaps = 8/355 (2%)
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
GL++L +L + +N +T+ F GL +L L L GL L+ L +
Sbjct: 352 GLASLQTL-YLSSNKLTSVPETVFNGLASLQTLYLSSNKLTSVPATVFAGLASLQYLYL- 409
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
+ N +T +GLT+L+SL +S +K+T GL L L L +T+
Sbjct: 410 YDNELTSIPATVFAGLTSLQSLYLSSNKLTSVPETVFDGLASLQTLYLSSNKLTSVPATV 469
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
+ L SL L L +L+ F+ + SL+ L L NE+T GL +L++L L
Sbjct: 470 FNGLASLQTLYLYDNELTSIPATGFNGLASLQTLYLSSNELTSIPETVFAGLASLQTLYL 529
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
+ GL +L+ L LS ++ S +GL +L+++ LS ++
Sbjct: 530 SGNELTSVPETVFAGLASLQTLYLSGNELTSVPETVFAGLASLQTLYLSSNELTSIPETV 589
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
AGL+SL+ L L + ++T L L L L +T +L++L +
Sbjct: 590 FAGLASLQYLYLSSNKLTSVPETVFAGLASLQTLYLSYNELTSVPETVFNGLASLQTLYL 649
Query: 404 CGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
LT AGL L SL + ++++TS L +LRSL+L+ ++T+
Sbjct: 650 SYNKLTSVPATVFAGLASLRSLGLYDNKLTSVPATVFAGLASLRSLSLDFNELTS 704
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 160/355 (45%), Gaps = 8/355 (2%)
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
GL++L +L + +N +T+ F GL +L L L+ GL L++L +
Sbjct: 184 GLASLQTL-YLSSNKLTSVPETVFNGLASLRSLYLDNNELTSVPETVFAGLASLQTLYL- 241
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
+ N +T +GL +L++L +S +K+T GL L L L +T+
Sbjct: 242 YDNELTSIPATVFAGLASLQTLYLSYNKLTSVPETVFDGLASLRSLYLSYNELTSVPETV 301
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
L SL YL L+ +L+ F+ + SL+ L L NE+T GL +L++L L
Sbjct: 302 FDGLASLQYLYLSSNKLTSVPATVFAGLTSLQTLYLSGNELTSVPETVFTGLASLQTLYL 361
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
S + GL +L+ L LS ++ S +GL +L+ + L ++
Sbjct: 362 SSNKLTSVPETVFNGLASLQTLYLSSNKLTSVPATVFAGLASLQYLYLYDNELTSIPATV 421
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
AGL+SL+SL L + ++T L L L L ++T A +L++L +
Sbjct: 422 FAGLTSLQSLYLSSNKLTSVPETVFDGLASLQTLYLSSNKLTSVPATVFNGLASLQTLYL 481
Query: 404 CGGGLTDA------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
LT GL L +L +S++ +TS L +L++L L ++T+
Sbjct: 482 YDNELTSIPATGFNGLASLQTLYLSSNELTSIPETVFAGLASLQTLYLSGNELTS 536
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 172/373 (46%), Gaps = 19/373 (5%)
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLN 161
GL++L L + NN +T+ FAGL ++ L L T + + N GL L+ LN
Sbjct: 736 GLASLQYL-YLDNNKLTSIPETVFAGLASVQTLYLSGNELTSVPETVFN--GLASLQYLN 792
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 221
+ N +T GL +L++L +S +K+T GL L L L+ +T+
Sbjct: 793 VS-SNELTSVPETVFDGLASLQTLDLSYNKLTSVPETVFAGLASLRSLYLDNNELTSVPE 851
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
+ L SL+ L+L+ +L+ F L L L N ++ L GL +LE+L
Sbjct: 852 TVFAGLDSLWRLDLHSNRLASLALSLFYDCHDLMELYLNNNLLSGLLPGSLDGLVSLEAL 911
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 341
L S + D L +L L L + ++ S +GL L ++++ ++ S
Sbjct: 912 YLHSNQLADISSDVFAQLSSLTTLTLHNNRLSSLSPGAFAGLARLTTLSIHHNRLTRLSP 971
Query: 342 RKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
GLS+L +L+L +T ALT L + LDL ++ D A L N LR+L
Sbjct: 972 GAFQGLSTLATLDLHDNHLTSLTAGALTGLDAMRALDLSSNKLADLPAQALHNLTGLRNL 1031
Query: 402 EICGGGLT--DAG----LTGLVSLNVSNSRI--TSAGLRHLKPLKNLRSLTLESCKVTAN 453
+ LT AG L GL L +S++R+ AGL L +LR L L+ +T+
Sbjct: 1032 SLDDNQLTSLSAGVLEPLAGLEYLWLSHNRLAEVPAGLGS---LASLRYLLLDHNPLTSL 1088
Query: 454 DIKRLQSRDLPNL 466
D+ L ++ P+L
Sbjct: 1089 DVSLLDNK--PDL 1099
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 6/253 (2%)
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
LT + L G +T+ + L SL YL L+ +L+ F+ + S++VL L NE+T
Sbjct: 92 LTEIRLSGNKLTSVPATVFAGLASLQYLYLSSNKLTSIPETVFAGLASIRVLILSGNELT 151
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
GL +L+ L LD+ + GL +L+ L LS ++ S +GL +
Sbjct: 152 SVPETVFAGLASLQYLYLDNNKLTSVPATVFNGLASLQTLYLSSNKLTSVPETVFNGLAS 211
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L S+ L ++ AGL+SL++L L ++T L L L L ++T
Sbjct: 212 LRSLYLDNNELTSVPETVFAGLASLQTLYLYDNELTSIPATVFAGLASLQTLYLSYNKLT 271
Query: 386 DSGAAYLRNFKNLRSLEICGGGLTDA------GLTGLVSLNVSNSRITSAGLRHLKPLKN 439
+LRSL + LT GL L L +S++++TS L +
Sbjct: 272 SVPETVFDGLASLRSLYLSYNELTSVPETVFDGLASLQYLYLSSNKLTSVPATVFAGLTS 331
Query: 440 LRSLTLESCKVTA 452
L++L L ++T+
Sbjct: 332 LQTLYLSGNELTS 344
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 168/381 (44%), Gaps = 22/381 (5%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVN 150
Q++D + LS+LT+L+ NN +++ AFAGL L L + R TR+ G
Sbjct: 917 QLADISSDVFAQLSSLTTLTLH-NNRLSSLSPGAFAGLARLTTLSIHHNRLTRLSPG--A 973
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
+GL L +L++ N +T L+GL +++L +S +K+ D L L L L+
Sbjct: 974 FQGLSTLATLDLH-DNHLTSLTAGALTGLDAMRALDLSSNKLADLPAQALHNLTGLRNLS 1032
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
L+ +T+ L L L YL L+ +L++ + SL+ L L N +T +
Sbjct: 1033 LDDNQLTSLSAGVLEPLAGLEYLWLSHNRLAEVPA-GLGSLASLRYLLLDHNPLTSLDVS 1091
Query: 271 HLKGLTNLESLNLDS---CGIGDEGLVNLTGLCNLKCLELSDTQVGSSG---LRHLSGLT 324
L +L +L ++S + + L L L + D Q S+ L LS LT
Sbjct: 1092 LLDNKPDLRALGVNSDAFKALSAQRPSVLETLLELWLCKSDDDQDQSAAGELLDKLSQLT 1151
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI 384
L + I G L+ LSS++ L L+ + L L L L +
Sbjct: 1152 GLYLFGFDQSLIHAG---MLSSLSSVRVLWLEDNLLDQLPPGTFDQLPSLQSLYLIHNGL 1208
Query: 385 TDSGAAYLRNFKNLRSLEICGGGLT--DAG----LTGLVSLNVSNSRITSAGLRHLKPLK 438
T A L N L L I G+T AG L+GL +L++S + I+S L
Sbjct: 1209 TAVPVAALSNLSGLTELHIVNDGITRVPAGAFRSLSGLRTLDLSGNLISSIEAEAFDNLD 1268
Query: 439 NLRSLTLESCKVTANDIKRLQ 459
N+R L L + ++ D+ L+
Sbjct: 1269 NVRQLDLSNNRLVMLDVAELR 1289
>gi|290991127|ref|XP_002678187.1| predicted protein [Naegleria gruberi]
gi|284091798|gb|EFC45443.1| predicted protein [Naegleria gruberi]
Length = 265
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 124/245 (50%), Gaps = 3/245 (1%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSG-LTNLKSLQIS-CSKVTDSGIAYLKGLQKLTL 208
+K L +L+SL I+ I D++ G L L SL IS C + + G+ ++ L KLT
Sbjct: 10 MKKLNQLKSLKIR-SKFIFGEDLRSYIGELKQLNSLNISDCINIGNRGVNVIRELDKLTE 68
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
L+++ C + + A+ L L++N C L G K+ + L + N I+D
Sbjct: 69 LHIDNCCIGEKGAKKIGAMQQLRTLSINGCGLGKKGVASVCKLKDMTKLGIRKNHISDSL 128
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
+ + +T L L+ IG EG +++ + NLK L L +G G++++SG+ L S
Sbjct: 129 ALEISQMTKLTELDAGVNDIGPEGAKSISQMTNLKTLLLDFNDIGKEGVKYISGMKQLIS 188
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG 388
+N+S I D ++ ++ + +L L++ + I D G ++ ++ LT LD+ +T G
Sbjct: 189 LNISENDIRDKGVKSISEMKNLTCLSVRSNSIGDEGAKYISEMSNLTQLDISCNVLTQKG 248
Query: 389 AAYLR 393
L+
Sbjct: 249 IKLLQ 253
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 106/217 (48%), Gaps = 11/217 (5%)
Query: 239 QLSDDGCEKFSKIGSLKVLN-LGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNL 296
+LS + +K +++ SLK+ + F E + ++ L L SLN+ C IG+ G+ +
Sbjct: 4 ELSSNFMKKLNQLKSLKIRSKFIFGE---DLRSYIGELKQLNSLNISDCINIGNRGVNVI 60
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
L L L + + +G G + + + L +++++ G+ + + L + L +
Sbjct: 61 RELDKLTELHIDNCCIGEKGAKKIGAMQQLRTLSINGCGLGKKGVASVCKLKDMTKLGIR 120
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL-----EICGGGLTD- 410
I+D+ ++ +T LT LD I GA + NL++L +I G+
Sbjct: 121 KNHISDSLALEISQMTKLTELDAGVNDIGPEGAKSISQMTNLKTLLLDFNDIGKEGVKYI 180
Query: 411 AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 447
+G+ L+SLN+S + I G++ + +KNL L++ S
Sbjct: 181 SGMKQLISLNISENDIRDKGVKSISEMKNLTCLSVRS 217
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 76 HLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
++ + L SL+ + CI I + G+ +R L LT L N I +G K + L
Sbjct: 34 YIGELKQLNSLNISDCINIGNRGVNVIRELDKLTELHID-NCCIGEKGAKKIGAMQQLRT 92
Query: 136 LDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDS-------------------DMKP- 175
L + C G+ ++ L + L I+ N I+DS D+ P
Sbjct: 93 LSINGCGLGKKGVASVCKLKDMTKLGIRK-NHISDSLALEISQMTKLTELDAGVNDIGPE 151
Query: 176 ----LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
+S +TNLK+L + + + G+ Y+ G+++L LN+ + + S+S + +L
Sbjct: 152 GAKSISQMTNLKTLLLDFNDIGKEGVKYISGMKQLISLNISENDIRDKGVKSISEMKNLT 211
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
L++ + D+G + S++ +L L++ N +T + + L+ ESLN
Sbjct: 212 CLSVRSNSIGDEGAKYISEMSNLTQLDISCNVLTQKGIKLLQ-----ESLN 257
>gi|72385483|ref|XP_846409.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|9366582|emb|CAB95344.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 1449
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 210/492 (42%), Gaps = 80/492 (16%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC 91
AL +L L G+N W + Q L LS + +TD + H C NL +LD +FC
Sbjct: 611 ALNELNLNNCFGINAGWEAIEKLQ--QLHVAILSNTHITDRDISHFSKCKNLVTLDLSFC 668
Query: 92 IQISD-------GGLEHL---------RGLSNLTSLSFRRNNAITAQGMKAFAGLI---- 131
++ D LE L +GLS L L R + +G++ +I
Sbjct: 669 NKLLDVTTLSNITTLEELNLDSCSNIRKGLSVLGELP--RLCVLNIKGVELEDSVIGSLG 726
Query: 132 ---NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI- 187
+ V+L LE C + G + L L+ LE LN+ +C+ +T S M L L L+ L +
Sbjct: 727 NGNSFVRLSLEHC-KGFGDVTPLSNLVTLEELNLHYCDKVT-SGMGTLGRLLQLRVLDLG 784
Query: 188 -------------------------SCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACL 221
C K+T S IA L L++L N++ C +
Sbjct: 785 RTQVDNNSLENICTSSIPLVLLNLSHCKKITSISAIASLTALEEL---NIDNCCNVTSGW 841
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLES 280
+ L L L+ +++D+ S+ SL LNL F +ITD + L +T LE
Sbjct: 842 NVFGTLHQLRVATLSNTRINDENVRYVSECKSLNTLNLAFCKDITD--VTALSKITMLEE 899
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES---INLSFTGIS 337
LNLD C +G+ L L + L + + +G S + S L N +S +NL + +
Sbjct: 900 LNLDCCHNIRKGIETLGKLPKARILSMKECYMGDSDAQQCSILGNSKSLVKLNLERS-MG 958
Query: 338 DGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
S++ L+ +++L+ L LD AR++ + S + L L + + TD +N
Sbjct: 959 FISVKALSNIATLEELVLDHAREV-----CCIPSFSCLPRLRVLNLKYTDINGDVTKNIS 1013
Query: 397 NLRSLEICG----GGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
+SL + +TD + L+ L LNVS+ G L L LR L
Sbjct: 1014 ESKSLRLLNLSHCKWVTDISVLSSLSTLEELNVSSCYGIKKGWESLGKLPLLRVAILSDT 1073
Query: 449 KVTANDIKRLQS 460
+TA DI L S
Sbjct: 1074 NITAKDIACLSS 1085
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 189/473 (39%), Gaps = 117/473 (24%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
LS + + D + ++ +C +L +L+ FC I+D
Sbjct: 855 LSNTRINDENVRYVSECKSLNTLNLAFCKDITD--------------------------- 887
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+ A + + L +L+L+ C I G+ L L K L++K C + DSD + S L N K
Sbjct: 888 VTALSKITMLEELNLDCCHNIRKGIETLGKLPKARILSMKECY-MGDSDAQQCSILGNSK 946
Query: 184 SL-----QISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
SL + S ++ ++ + L++L L + C+ S S L L LNL
Sbjct: 947 SLVKLNLERSMGFISVKALSNIATLEELVLDHAR----EVCCIPSFSCLPRLRVLNLKYT 1002
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GI--GDEGL-- 293
++ D + S+ SL++LNL + + V L L+ LE LN+ SC GI G E L
Sbjct: 1003 DINGDVTKNISESKSLRLLNLSHCKWVTDISV-LSSLSTLEELNVSSCYGIKKGWESLGK 1061
Query: 294 -----------VNLTG-----------LCNLK---CLELSDTQV---------------- 312
N+T L L+ C ELSD V
Sbjct: 1062 LPLLRVAILSDTNITAKDIACLSSCKTLVKLQFSWCEELSDVTVVYEIQSLEELIVKKYS 1121
Query: 313 -GSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR-QITDTGLAALTS 370
G GL L L L ++L SD S+ + SL LN++ R ++TD + L++
Sbjct: 1122 DGLKGLNALGTLPRLRFLHLRNVRGSDISVESIGTSKSLVRLNIEMRGELTD--ITPLSN 1179
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLE-------------IC------------G 405
+T L L L+ R T GA L LRSL+ IC
Sbjct: 1180 ITSLEELSLWECRDTLEGAWTLERLPRLRSLDLGLSDISDSTLYYICLSRFITSLNLTSS 1239
Query: 406 GGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAND 454
LTD + LT L LN+ ++G L L LR L LES VT D
Sbjct: 1240 WKLTDISGISKLTALEELNLRGCHRITSGWEALSELPRLRVLNLESTSVTTRD 1292
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 156/372 (41%), Gaps = 61/372 (16%)
Query: 133 LVKLDLERCTRIHGGLVNLKGL---MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISC 189
L++L LE T GL++++ L + LE L++ C I D+ + L L LK L +S
Sbjct: 518 LLQLTLESIT----GLIDVEALANILTLEKLSLHGCTGI-DAGIGCLGNLPQLKMLDLSG 572
Query: 190 SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS 249
+ + + L Q + LNL C + +S+L +L LNLN C + G E
Sbjct: 573 TNTDNESLRSLCLSQTMVSLNLSHC-WKMTNVSHISSLEALNELNLNNCFGINAGWEAIE 631
Query: 250 KIGSLKVLNLGFNEITDECLVH-----------------------LKGLTNLESLNLDSC 286
K+ L V L ITD + H L +T LE LNLDSC
Sbjct: 632 KLQQLHVAILSNTHITDRDISHFSKCKNLVTLDLSFCNKLLDVTTLSNITTLEELNLDSC 691
Query: 287 GIGDEGLV---NLTGLC--NLKCLELSDTQVGSSG---------LRH---------LSGL 323
+GL L LC N+K +EL D+ +GS G L H LS L
Sbjct: 692 SNIRKGLSVLGELPRLCVLNIKGVELEDSVIGSLGNGNSFVRLSLEHCKGFGDVTPLSNL 751
Query: 324 TNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL-TSLTGLTHLDL-FG 381
LE +NL + + L L L+ L+L Q+ + L + TS L L+L
Sbjct: 752 VTLEELNLHYCDKVTSGMGTLGRLLQLRVLDLGRTQVDNNSLENICTSSIPLVLLNLSHC 811
Query: 382 ARITD-SGAAYLRNFKNLRSLEIC---GGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPL 437
+IT S A L + L C G L L +SN+RI +R++
Sbjct: 812 KKITSISAIASLTALEELNIDNCCNVTSGWNVFGTLHQLRVATLSNTRINDENVRYVSEC 871
Query: 438 KNLRSLTLESCK 449
K+L +L L CK
Sbjct: 872 KSLNTLNLAFCK 883
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 158/369 (42%), Gaps = 44/369 (11%)
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+ + L L +L++ C I G +L G + L + I IT D+ LS L
Sbjct: 1032 ISVLSSLSTLEELNVSSCYGIKKGWESL-GKLPLLRVAILSDTNITAKDIACLSSCKTLV 1090
Query: 184 SLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
LQ S C +++D + Y +Q L L ++ L++L L L +L+L + SD
Sbjct: 1091 KLQFSWCEELSDVTVVY--EIQSLEELIVKKYSDGLKGLNALGTLPRLRFLHLRNVRGSD 1148
Query: 243 DGCEKFSKIGSLKVLNLGFN-EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
E SL LN+ E+TD + L +T+LE L+L C EG L L
Sbjct: 1149 ISVESIGTSKSLVRLNIEMRGELTD--ITPLSNITSLEELSLWECRDTLEGAWTLERLPR 1206
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS---SLKSLNLDAR 358
L+ L+L + + S L ++ + S+NL+ S L ++G+S +L+ LNL
Sbjct: 1207 LRSLDLGLSDISDSTLYYICLSRFITSLNLT----SSWKLTDISGISKLTALEELNLRGC 1262
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITD-SGAAYLRNFKNLRSLEICGGGLTDA------ 411
+G AL+ L L L+L +T G Y+ K+L +L I +TDA
Sbjct: 1263 HRITSGWEALSELPRLRVLNLESTSVTTRDGGYYISRCKSLVTLNIQLSDMTDASCLANI 1322
Query: 412 ----------------GLTGLVSL------NVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
G + L +L N+ S IT LR ++P + L L CK
Sbjct: 1323 KTLEELHIGECDELTQGFSALFTLPRLRILNLMGSLITDEDLREIQPPHTIEELNLSYCK 1382
Query: 450 VTANDIKRL 458
NDI L
Sbjct: 1383 -NLNDITPL 1390
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 148/328 (45%), Gaps = 44/328 (13%)
Query: 155 MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEG 213
+KL L++ CN ITD+ P+S L L+ L + SC +T GI L L +L +L+L G
Sbjct: 303 VKLSKLSVSECNNITDA--TPISQLAALEELNVNSCYHIT-KGIGTLGMLLRLRMLDLSG 359
Query: 214 CPVTAACLDSLSALGSLFYLNLNRC-QLSD---------------DGCEKFSK------- 250
PV CL L GSL LNL+ C QL+D +GC + ++
Sbjct: 360 VPVEDNCLKDLCDCGSLERLNLSYCIQLTDINPLSSATAIEELNLNGCRRITRGIGVVWA 419
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD 309
+ L+VL++ ++ D + L + L+L++C G GD L L+ + L+ L +
Sbjct: 420 LPKLRVLHMKDVQLEDSVIGSLGNGNSFVRLSLENCAGFGDMTL--LSSIVTLEELNIQK 477
Query: 310 TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL---A 366
SG+ L L L +N+ IS + SL L L++ TGL
Sbjct: 478 CADIISGVGCLGTLPYLRVLNVKEVHISSLDFTGIGASKSLLQLTLESI----TGLIDVE 533
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL------VSLN 420
AL ++ L L L G D+G L N L+ L++ G + L L VSLN
Sbjct: 534 ALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTMVSLN 593
Query: 421 VSNSRITSAGLRHLKPLKNLRSLTLESC 448
+S+ + H+ L+ L L L +C
Sbjct: 594 LSHC-WKMTNVSHISSLEALNELNLNNC 620
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 181/422 (42%), Gaps = 57/422 (13%)
Query: 20 LTEVSLEAFRD--CALQDLCLGQYPGVNDKWMDVIA------SQGSSLLSVDLSGSD-VT 70
L E+ L+ R+ C CL + +N K+ D+ S+ SL ++LS VT
Sbjct: 971 LEELVLDHAREVCCIPSFSCLPRLRVLNLKYTDINGDVTKNISESKSLRLLNLSHCKWVT 1030
Query: 71 DSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGL 130
D + L S L+ L+ + C I G E L L L ++ + ITA+ + +
Sbjct: 1031 DISV--LSSLSTLEELNVSSCYGIKKG-WESLGKLP-LLRVAILSDTNITAKDIACLSSC 1086
Query: 131 INLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD----MKPLSGLTNLKSLQ 186
LVKL C + V + + LE L +K SD + L L L+ L
Sbjct: 1087 KTLVKLQFSWCEELSDVTV-VYEIQSLEELIVK-----KYSDGLKGLNALGTLPRLRFLH 1140
Query: 187 ISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD--SLSALGSLFYLNLNRCQLSDDG 244
+ + +D + + + L LN+E + D LS + SL L+L C+ + +G
Sbjct: 1141 LRNVRGSDISVESIGTSKSLVRLNIE---MRGELTDITPLSNITSLEELSLWECRDTLEG 1197
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVH-----------------------LKGLTNLESL 281
++ L+ L+LG ++I+D L + + LT LE L
Sbjct: 1198 AWTLERLPRLRSLDLGLSDISDSTLYYICLSRFITSLNLTSSWKLTDISGISKLTALEEL 1257
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS-SGLRHLSGLTNLESINLSFTGISDGS 340
NL C G L+ L L+ L L T V + G ++S +L ++N+ + ++D S
Sbjct: 1258 NLRGCHRITSGWEALSELPRLRVLNLESTSVTTRDGGYYISRCKSLVTLNIQLSDMTDAS 1317
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRS 400
LA + +L+ L++ G +AL +L L L+L G+ ITD LR + +
Sbjct: 1318 C--LANIKTLEELHIGECDELTQGFSALFTLPRLRILNLMGSLITDED---LREIQPPHT 1372
Query: 401 LE 402
+E
Sbjct: 1373 IE 1374
>gi|72385469|ref|XP_846402.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|9366571|emb|CAB95333.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 1448
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 218/501 (43%), Gaps = 73/501 (14%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC 91
AL +L L +N W + Q L LS + +TD + H C NL +LD +FC
Sbjct: 610 ALNELNLSNCIRINAGWEAIEKLQ--QLHVAILSNTHITDRDISHFSKCKNLVTLDLSFC 667
Query: 92 IQISD-------GGLEHL---------RGLSNLTSLSFRRNNAITAQGMKAFAGLI---- 131
++ D LE L +GLS L L R + +G++ +I
Sbjct: 668 NKLLDVTTLSNITTLEELNLDSCSNIRKGLSVLGELP--RLCVLNIKGVQLEDSVIGSLG 725
Query: 132 ---NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
+ V+L LE C + GG+ L L+ LE LN+ +C+ +T S M L L L+ L +
Sbjct: 726 NGNSFVRLSLENC-KGFGGVTPLSNLVTLEELNLHYCDKVT-SGMGTLGRLLQLRVLDLG 783
Query: 189 CSKVTD------------------------SGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
++V D + I+ + L L LN++ C + +
Sbjct: 784 RTQVDDNSLENICTCSSPLVSLNLSHCKKITSISAIASLTALEELNIDNCCNVTSGWNVF 843
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNL 283
L L L+ +++D+ + S+ SL LNL F +ITD + L +T LE LNL
Sbjct: 844 GTLHQLRVATLSNTRINDENIQHVSECKSLNTLNLAFCKDITD--VTALSTITMLEELNL 901
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES---INLSFTGISDGS 340
D C +G+ L L ++ L + + +G S + S L N +S +NL + + S
Sbjct: 902 DCCHNIRKGIETLGKLPKVRILSMKECYMGDSDAQQCSILGNSKSLVKLNLERS-MGFIS 960
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF---KN 397
++ L+ +++L+ L LD+ G+ + S + L L + + TD +N K+
Sbjct: 961 VKALSNIATLEELVLDSV----CGIYDVLSFSCLPRLRVLNLKYTDINDDVTKNISESKS 1016
Query: 398 LRSLEICG-GGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
L+SL + +TD + L+ L LNV+ G L L LR L +TA
Sbjct: 1017 LQSLNLSHCKWVTDISVLSSLSTLEELNVNFCNGIRKGWESLGKLPLLRVAILSDTNITA 1076
Query: 453 NDIKRLQS-RDLPNLVSFRPE 472
DI L S + L L FR E
Sbjct: 1077 KDIACLSSCKKLVKLQFFRCE 1097
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 179/453 (39%), Gaps = 77/453 (16%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISD----------------------GGLEH 101
LS + + D + H+ +C +L +L+ FC I+D G+E
Sbjct: 854 LSNTRINDENIQHVSECKSLNTLNLAFCKDITDVTALSTITMLEELNLDCCHNIRKGIET 913
Query: 102 LRGLSNLTSLSFRR--NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES 159
L L + LS + AQ +LVKL+LER G +++K L + +
Sbjct: 914 LGKLPKVRILSMKECYMGDSDAQQCSILGNSKSLVKLNLERSM----GFISVKALSNIAT 969
Query: 160 LNIKWCNCITDS-----DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC 214
L + DS D+ S L L+ L + + + D + + L LNL C
Sbjct: 970 LE----ELVLDSVCGIYDVLSFSCLPRLRVLNLKYTDINDDVTKNISESKSLQSLNLSHC 1025
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG 274
+ LS+L +L LN+N C G E K+ L+V L IT + + L
Sbjct: 1026 KWVTD-ISVLSSLSTLEELNVNFCNGIRKGWESLGKLPLLRVAILSDTNITAKDIACLSS 1084
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE---LSDTQVGSSGLRHLSGLTNLESINL 331
L L C E L ++T + ++ LE + G GL L L+ L ++L
Sbjct: 1085 CKKLVKLQFFRC----EKLSDVTVVYEIQSLEELIVRKYSDGLKGLNALGTLSRLRFLHL 1140
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQ-ITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
SD S+ + SL LN++ R+ +TD L+++T L L L T GA
Sbjct: 1141 RNARGSDISVESIGTSKSLVRLNIETREELTDA--TPLSNITSLEELSLRDCGDTLEGAW 1198
Query: 391 YLRNFKNLRSL-------------EIC------------GGGLTD----AGLTGLVSLNV 421
L LRSL EIC LTD + LT L LN+
Sbjct: 1199 TLGKLPRLRSLDLGLSDISDNTLDEICLSRFITSLNLRYNFKLTDISSISNLTALEELNL 1258
Query: 422 SNSRITSAGLRHLKPLKNLRSLTLESCKVTAND 454
S ++G L L LR L LES VT D
Sbjct: 1259 SGCHRITSGWEALSELPRLRVLNLESTSVTTRD 1291
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 200/475 (42%), Gaps = 73/475 (15%)
Query: 18 RCLTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSV-DLSGSDVTDSGLI 75
R + +S++A + A L++L L G+ DV++ L V +L +D+ D
Sbjct: 954 RSMGFISVKALSNIATLEELVLDSVCGI----YDVLSFSCLPRLRVLNLKYTDINDDVTK 1009
Query: 76 HLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
++ + +LQSL+ + C ++D +S L+SLS L +
Sbjct: 1010 NISESKSLQSLNLSHCKWVTD--------ISVLSSLS-------------------TLEE 1042
Query: 136 LDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTD 194
L++ C I G +L G + L + I IT D+ LS L LQ C K++D
Sbjct: 1043 LNVNFCNGIRKGWESL-GKLPLLRVAILSDTNITAKDIACLSSCKKLVKLQFFRCEKLSD 1101
Query: 195 SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSL 254
+ Y +Q L L + L++L L L +L+L + SD E SL
Sbjct: 1102 VTVVY--EIQSLEELIVRKYSDGLKGLNALGTLSRLRFLHLRNARGSDISVESIGTSKSL 1159
Query: 255 KVLNLGF-NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL--SDTQ 311
LN+ E+TD L +T+LE L+L CG EG L L L+ L+L SD
Sbjct: 1160 VRLNIETREELTDA--TPLSNITSLEELSLRDCGDTLEGAWTLGKLPRLRSLDLGLSDIS 1217
Query: 312 ------------VGSSGLRH---------LSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
+ S LR+ +S LT LE +NLS L+ L L
Sbjct: 1218 DNTLDEICLSRFITSLNLRYNFKLTDISSISNLTALEELNLSGCHRITSGWEALSELPRL 1277
Query: 351 KSLNLDARQITDT-GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLT 409
+ LNL++ +T G ++ L L+L +TD A+ L N K L L I
Sbjct: 1278 RVLNLESTSVTTRDGGYYISRCKSLVTLNLESCDMTD--ASCLANIKTLEELHIGECDEL 1335
Query: 410 DAGLTGLVSL------NVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
G + L +L N+ +S IT LR ++P + L L CK NDI L
Sbjct: 1336 TQGFSALFTLPRLRILNLMDSLITDEDLREIQPPHTIEELNLSYCK-NLNDITPL 1389
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 181/412 (43%), Gaps = 41/412 (9%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ ++L ++L+ +++ DS + + C L L + C ++D + L+ L L+
Sbjct: 276 SRLTNLKCLELNSTNIDDSCVEEISACVKLSKLSVSECNNVTDAT--PISQLAALEELNL 333
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
+N +G+ L+ L LDL L +L LE LNI +C I +D+
Sbjct: 334 --SNCHITKGIGTLGMLLRLRILDLSGVPVEDNCLKDLCDCGSLERLNISYC--IQLTDI 389
Query: 174 KPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
PLS T ++ L ++ C ++T GI + L +L +L+++ ++ LDS+ G L
Sbjct: 390 NPLSNATAIEELNLNGCRRIT-RGIGVVWALPRLRILHMKDVHLSEPSLDSVGTGGLLVK 448
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
++L+ C GF ++T L + LE LN+ C G
Sbjct: 449 VSLDNCA--------------------GFGDMT-----LLSSIVTLEELNIQKCADIISG 483
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAGLSSLK 351
+ L L L+ L + + + S + +L + L SFTG+S+ + LA + +L+
Sbjct: 484 VGCLGTLPYLRVLNVKEVHISSLDFIGIGASKSLLQLTLESFTGLSN--VEALANILTLE 541
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG-GGLTD 410
L+L D G+ L +L L LDL G + L + + SL + +T+
Sbjct: 542 KLSLHGCTGIDAGIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTVVSLNLSHCWKMTN 601
Query: 411 ----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
+ L L LN+SN +AG ++ L+ L L + +T DI
Sbjct: 602 VSHISSLEALNELNLSNCIRINAGWEAIEKLQQLHVAILSNTHITDRDISHF 653
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 174/391 (44%), Gaps = 51/391 (13%)
Query: 94 ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG 153
I + HL + L L+ +T ++ + L NL L+L + +
Sbjct: 244 IDNNDARHLFSVGTLEELAITDTMQLT--NIREISRLTNLKCLELNSTNIDDSCVEEISA 301
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
+KL L++ CN +TD+ P+S L L+ L +S +T GI L L +L +L+L G
Sbjct: 302 CVKLSKLSVSECNNVTDA--TPISQLAALEELNLSNCHIT-KGIGTLGMLLRLRILDLSG 358
Query: 214 CPVTAACLDSLSALGSLFYLNLNRC-QLSD---------------DGCEKFSK------- 250
PV CL L GSL LN++ C QL+D +GC + ++
Sbjct: 359 VPVEDNCLKDLCDCGSLERLNISYCIQLTDINPLSNATAIEELNLNGCRRITRGIGVVWA 418
Query: 251 IGSLKVLNLGFNEITDECL--VHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLEL 307
+ L++L++ +++ L V GL L ++LD+C G GD L L+ + L+ L +
Sbjct: 419 LPRLRILHMKDVHLSEPSLDSVGTGGL--LVKVSLDNCAGFGDMTL--LSSIVTLEELNI 474
Query: 308 SDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA- 366
SG+ L L L +N+ IS + SL L L++ TGL+
Sbjct: 475 QKCADIISGVGCLGTLPYLRVLNVKEVHISSLDFIGIGASKSLLQLTLESF----TGLSN 530
Query: 367 --ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL------VS 418
AL ++ L L L G D+G L N L+ L++ G + L L VS
Sbjct: 531 VEALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTVVS 590
Query: 419 LNVSNS-RITSAGLRHLKPLKNLRSLTLESC 448
LN+S+ ++T+ H+ L+ L L L +C
Sbjct: 591 LNLSHCWKMTNVS--HISSLEALNELNLSNC 619
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 131/530 (24%), Positives = 204/530 (38%), Gaps = 143/530 (26%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISD-------GGLEHL---------RGL 105
+DLSG V D+ L L DC +L+ L+ ++CIQ++D +E L RG+
Sbjct: 354 LDLSGVPVEDNCLKDLCDCGSLERLNISYCIQLTDINPLSNATAIEELNLNGCRRITRGI 413
Query: 106 SNLTSLSFRR----------------------------NNAITAQGMKAFAGLINLVKLD 137
+ +L R +N M + ++ L +L+
Sbjct: 414 GVVWALPRLRILHMKDVHLSEPSLDSVGTGGLLVKVSLDNCAGFGDMTLLSSIVTLEELN 473
Query: 138 LERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD--------------MKPLSGLTNLK 183
+++C I G+ L L L LN+K + I+ D ++ +GL+N++
Sbjct: 474 IQKCADIISGVGCLGTLPYLRVLNVKEVH-ISSLDFIGIGASKSLLQLTLESFTGLSNVE 532
Query: 184 SLQ--ISCSKVT-------DSGIAYLKGLQKLTLLNLEGCPVTAACLDSL---------- 224
+L ++ K++ D+GI L L +L +L+L G L SL
Sbjct: 533 ALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTVVSLN 592
Query: 225 -------------SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH 271
S+L +L LNL+ C + G E K+ L V L ITD + H
Sbjct: 593 LSHCWKMTNVSHISSLEALNELNLSNCIRINAGWEAIEKLQQLHVAILSNTHITDRDISH 652
Query: 272 LKGLTNLESL-----------------------NLDSCGIGDEGLV---NLTGLC--NLK 303
NL +L NLDSC +GL L LC N+K
Sbjct: 653 FSKCKNLVTLDLSFCNKLLDVTTLSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIK 712
Query: 304 CLELSDTQVGS------------------SGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
++L D+ +GS G+ LS L LE +NL + + L
Sbjct: 713 GVQLEDSVIGSLGNGNSFVRLSLENCKGFGGVTPLSNLVTLEELNLHYCDKVTSGMGTLG 772
Query: 346 GLSSLKSLNLDARQITDTGLAAL-TSLTGLTHLDL-FGARITD-SGAAYLRNFKNLRSLE 402
L L+ L+L Q+ D L + T + L L+L +IT S A L + L
Sbjct: 773 RLLQLRVLDLGRTQVDDNSLENICTCSSPLVSLNLSHCKKITSISAIASLTALEELNIDN 832
Query: 403 IC---GGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
C G L L +SN+RI ++H+ K+L +L L CK
Sbjct: 833 CCNVTSGWNVFGTLHQLRVATLSNTRINDENIQHVSECKSLNTLNLAFCK 882
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 12/200 (6%)
Query: 254 LKVLNLGFNEITDECLVHLKGLTNLESLNL-DSCGIGDEGLVNLTGLCNLKCLELSDTQV 312
LK L L N I + HL + LE L + D+ + + + ++ L NLKCLEL+ T +
Sbjct: 234 LKRLRLRSNNIDNNDARHLFSVGTLEELAITDTMQLTN--IREISRLTNLKCLELNSTNI 291
Query: 313 GSSGLRHLSGLTNLESINLS-FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 371
S + +S L +++S ++D + ++ L++L+ LNL IT G+ L L
Sbjct: 292 DDSCVEEISACVKLSKLSVSECNNVTDAT--PISQLAALEELNLSNCHITK-GIGTLGML 348
Query: 372 TGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG-GLTD----AGLTGLVSLNVSNSRI 426
L LDL G + D+ L + +L L I LTD + T + LN++ R
Sbjct: 349 LRLRILDLSGVPVEDNCLKDLCDCGSLERLNISYCIQLTDINPLSNATAIEELNLNGCRR 408
Query: 427 TSAGLRHLKPLKNLRSLTLE 446
+ G+ + L LR L ++
Sbjct: 409 ITRGIGVVWALPRLRILHMK 428
>gi|17546520|ref|NP_519922.1| GALA protein 3 [Ralstonia solanacearum GMI1000]
Length = 522
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 186/435 (42%), Gaps = 62/435 (14%)
Query: 1 MLPRDISQQI--------FNELVYSRCLTEVSLEA-FRDCALQD-------LCLGQYPGV 44
LP DI ++I L + + ++EA R+ ++D L G YP
Sbjct: 50 QLPPDIFREIARRSDPLTVQRLRVASKPVKAAIEADMRELVIKDRAGLAGVLRAGNYP-- 107
Query: 45 NDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI-QISDGGLEHLR 103
+L + L+G+ TD L L ++L++LD + C I+ G+ HL
Sbjct: 108 -------------ALEKLTLAGT-FTDDDLRGLP--ASLKALDLSRCRGSITAAGIAHLS 151
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
L L L+ R N I A+G + A L L++ G L +L +LN+
Sbjct: 152 RLP-LVRLNVR-NKRIGAEGARLLANHPTLTSLNVSNGRIGPEGAQALAANTRLTTLNVS 209
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
N I + K L+ L+SL +S +++ D G L AAC
Sbjct: 210 -GNRIGVAGAKALAANQTLRSLDVSDNRIGDEGAREL-----------------AACTQ- 250
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
L L+ NR + DG + +L L +G NEI D ++ L L +LN+
Sbjct: 251 ------LTTLDANRNGIGVDGATALAASRTLTSLAIGGNEIGDAGVLALAANARLTTLNV 304
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
+S G+G +G+ L L L L +G++G L+ T+L +++L + I +
Sbjct: 305 ESTGVGADGVKALAASKTLTWLRLDGNDIGNAGATALAASTSLTTLHLEHSRIGAEGAQA 364
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
LA + L +L+L I D G+ AL++ L L + + D+ A L K L +L+I
Sbjct: 365 LAANTKLTTLDLGYNDIGDAGVRALSANATLVWLSVRRNNLEDASAVSLAAGKTLTTLDI 424
Query: 404 CGGGLTDAGLTGLVS 418
G G+ D G L +
Sbjct: 425 SGNGIQDQGAKALAA 439
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 3/276 (1%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
+L S+D+S + + D G L C+ L +LD N I G L LTSL+ N
Sbjct: 226 TLRSLDVSDNRIGDEGARELAACTQLTTLDANRN-GIGVDGATALAASRTLTSLAIG-GN 283
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS 177
I G+ A A L L++E G+ L L L + N I ++ L+
Sbjct: 284 EIGDAGVLALAANARLTTLNVESTGVGADGVKALAASKTLTWLRLD-GNDIGNAGATALA 342
Query: 178 GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
T+L +L + S++ G L KLT L+L + A + +LSA +L +L++ R
Sbjct: 343 ASTSLTTLHLEHSRIGAEGAQALAANTKLTTLDLGYNDIGDAGVRALSANATLVWLSVRR 402
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
L D + +L L++ N I D+ L L +L++ S I + G L
Sbjct: 403 NNLEDASAVSLAAGKTLTTLDISGNGIQDQGAKALAANPTLTTLDVSSNDIKNAGARALA 462
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
L L+L + ++ SG R L L S+ +S
Sbjct: 463 ANARLVSLDLRNNRMEESGTRALLANRTLSSLGVSL 498
>gi|290991518|ref|XP_002678382.1| predicted protein [Naegleria gruberi]
gi|284091994|gb|EFC45638.1| predicted protein [Naegleria gruberi]
Length = 344
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 151/337 (44%), Gaps = 32/337 (9%)
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
NN IT++G + F L L+KLD+ GG I D MK
Sbjct: 11 NNPITSKGAEYFTNLKQLIKLDI-------GGTE------------------IGDEGMKS 45
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQK-LTLLNLEGCPVTAACLDSLSALGSLFYLN 234
+ + L L++ +K+ D GI L L LT L + + +L L L YL+
Sbjct: 46 IGKMKQLTKLEMCGNKIGDEGIKALSNLNSSLTHLCVRKNNIGQEGAKTLKHLTRLNYLD 105
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
+ + +L + G ++ S++ L L + N I DE + + L L + IGD G +
Sbjct: 106 IRKNKLGNQGAKEISELPQLTRLFICKNNIGDEGAKAIGEIQTLTQLVMSENPIGDGGAI 165
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
+++ L +LK L + T V + G++ + + L +++ + ++ + L+ L L
Sbjct: 166 SVSQLRHLKTLCIQWTNVRTEGIKAICNMKQLTCLHIQSNKLGFDDIKPIGQLNQLTRLL 225
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT 414
+ QI D+G ++ L LT+L ++ + I GA L KNL L + G + + GL
Sbjct: 226 ISDNQIGDSGAKIISELNQLTNLRIYDSNIGIEGAKSLSGMKNLTKLNLSGNKIGNKGLE 285
Query: 415 G------LVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
L L+V + I G ++L + NLR L +
Sbjct: 286 AISGMLQLQKLSVIHCEIGDEGAKYLLNMPNLRKLYI 322
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 8/300 (2%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC-IQISDGGLEHLRGL-SNLTSLSFR 114
L+ +D+ G+++ D G+ + L L+ C +I D G++ L L S+LT L R
Sbjct: 26 KQLIKLDIGGTEIGDEGMKSIGKMKQLTKLEM--CGNKIGDEGIKALSNLNSSLTHLCVR 83
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC-NCITDSDM 173
+NN I +G K L L LD+ + + G + L +L L I C N I D
Sbjct: 84 KNN-IGQEGAKTLKHLTRLNYLDIRKNKLGNQGAKEISELPQLTRLFI--CKNNIGDEGA 140
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K + + L L +S + + D G + L+ L L ++ V + ++ + L L
Sbjct: 141 KAIGEIQTLTQLVMSENPIGDGGAISVSQLRHLKTLCIQWTNVRTEGIKAICNMKQLTCL 200
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
++ +L D + ++ L L + N+I D + L L +L + IG EG
Sbjct: 201 HIQSNKLGFDDIKPIGQLNQLTRLLISDNQIGDSGAKIISELNQLTNLRIYDSNIGIEGA 260
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
+L+G+ NL L LS ++G+ GL +SG+ L+ +++ I D + L + +L+ L
Sbjct: 261 KSLSGMKNLTKLNLSGNKIGNKGLEAISGMLQLQKLSVIHCEIGDEGAKYLLNMPNLRKL 320
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 129/319 (40%), Gaps = 57/319 (17%)
Query: 203 LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
+ + T LN+ P+T+ + + L L L++ ++ D+G + K+ L L + N
Sbjct: 1 MTQFTELNVFNNPITSKGAEYFTNLKQLIKLDIGGTEIGDEGMKSIGKMKQLTKLEMCGN 60
Query: 263 EITDE----------CLVH---------------LKGLTNLESLNLDSCGIGDEGLVNLT 297
+I DE L H LK LT L L++ +G++G ++
Sbjct: 61 KIGDEGIKALSNLNSSLTHLCVRKNNIGQEGAKTLKHLTRLNYLDIRKNKLGNQGAKEIS 120
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA 357
L L L + +G G + + + L + +S I DG ++ L LK+L +
Sbjct: 121 ELPQLTRLFICKNNIGDEGAKAIGEIQTLTQLVMSENPIGDGGAISVSQLRHLKTLCIQW 180
Query: 358 RQITDTGLAA------------------------LTSLTGLTHLDLFGARITDSGAAYLR 393
+ G+ A + L LT L + +I DSGA +
Sbjct: 181 TNVRTEGIKAICNMKQLTCLHIQSNKLGFDDIKPIGQLNQLTRLLISDNQIGDSGAKIIS 240
Query: 394 NFKNLRSLEI------CGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 447
L +L I G + +G+ L LN+S ++I + GL + + L+ L++
Sbjct: 241 ELNQLTNLRIYDSNIGIEGAKSLSGMKNLTKLNLSGNKIGNKGLEAISGMLQLQKLSVIH 300
Query: 448 CKVTANDIKRLQSRDLPNL 466
C++ K L ++PNL
Sbjct: 301 CEIGDEGAKYL--LNMPNL 317
>gi|299065269|emb|CBJ36437.1| leucine-rich-repeat type III effector protein (GALA8) [Ralstonia
solanacearum CMR15]
Length = 524
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 166/378 (43%), Gaps = 17/378 (4%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR----RNNAITAQGMKAFAGLINLVKL 136
++++ +D + C S + GL L L ++ +T+ G +A A L L
Sbjct: 103 ASVRHIDLSGCNATSSTSATSVAGLKYLAKLPITSLVIQDAGMTSVGARALAASDTLTSL 162
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG 196
DL G L L +LN+ N I + L+ L +L + +K+ D+G
Sbjct: 163 DLRGNKITDLGAQALATSRTLTTLNLD-TNTIGAKGAQALAASRTLTTLNLRGNKIEDAG 221
Query: 197 IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 256
L LT L+ EGC + A + +L+A SL LNL + D G + + +L
Sbjct: 222 AQALAASTTLTSLSAEGCRIGLAGVQALAASRSLTTLNLAGNNIDDAGAQALAASRTLTT 281
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
L+L N+I D + L L SL +D C IG G L +L L +S VG +G
Sbjct: 282 LDLSANKIGDAGALALAASRTLASLEVDHCEIGAAGAQALATSDSLAALNISHNPVGDAG 341
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
+ L+ L SI I + LA SL SL+LDA QI D G AL + LT
Sbjct: 342 AQALAICRTLTSIKAKDCQIGAAGAQALAASDSLTSLDLDANQIGDDGAQALATSNTLTS 401
Query: 377 LDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG---------LVSLNVSNSRIT 427
L++ I D G L + L SL++ + G+T L SLNVS + I
Sbjct: 402 LNVRYNTIGDLGVQALAANRLLESLDVSDNKI---GITSVQALAENCTLTSLNVSGNNIG 458
Query: 428 SAGLRHLKPLKNLRSLTL 445
AG + L ++L SL +
Sbjct: 459 DAGAQLLAANRSLTSLNV 476
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 134/484 (27%), Positives = 208/484 (42%), Gaps = 49/484 (10%)
Query: 4 RDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPG------VNDKWMDVIASQGS 57
R IS ++ N + + +T +++ L L G YP V + + + + +
Sbjct: 48 RSISHELHN--ITNATITGLTIT--DPSGLNRLSRGDYPKLQSVRLVGNFTVQDLKALPA 103
Query: 58 SLLSVDLSGSDVTDS-GLIHLKDCSNLQSLDFNFCIQISDGGLEHL--RGLS---NLTSL 111
S+ +DLSG + T S + L L + I D G+ + R L+ LTSL
Sbjct: 104 SVRHIDLSGCNATSSTSATSVAGLKYLAKLPITSLV-IQDAGMTSVGARALAASDTLTSL 162
Query: 112 SFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDS 171
R N IT G +A A L L+L+ T G L L +LN++ N I D+
Sbjct: 163 DLR-GNKITDLGAQALATSRTLTTLNLDTNTIGAKGAQALAASRTLTTLNLR-GNKIEDA 220
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
+ L+ T L SL ++ +G+ L + LT LNL G + A +L+A +L
Sbjct: 221 GAQALAASTTLTSLSAEGCRIGLAGVQALAASRSLTTLNLAGNNIDDAGAQALAASRTLT 280
Query: 232 YLNL------------------------NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
L+L + C++ G + + SL LN+ N + D
Sbjct: 281 TLDLSANKIGDAGALALAASRTLASLEVDHCEIGAAGAQALATSDSLAALNISHNPVGDA 340
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
L L S+ C IG G L +L L+L Q+G G + L+ L
Sbjct: 341 GAQALAICRTLTSIKAKDCQIGAAGAQALAASDSLTSLDLDANQIGDDGAQALATSNTLT 400
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDS 387
S+N+ + I D ++ LA L+SL++ +I T + AL LT L++ G I D+
Sbjct: 401 SLNVRYNTIGDLGVQALAANRLLESLDVSDNKIGITSVQALAENCTLTSLNVSGNNIGDA 460
Query: 388 GAAYLRNFKNLRSLEICGGGLTDAGLT------GLVSLNVSNSRITSAGLRHLKPLKNLR 441
GA L ++L SL +C + DAG L SL+VS +RI AG R L + L
Sbjct: 461 GAQLLAANRSLTSLNVCWSRIGDAGALALAANRSLTSLDVSVNRIGEAGARALVANRFLV 520
Query: 442 SLTL 445
SL +
Sbjct: 521 SLKM 524
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 16/256 (6%)
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLN--------LNRCQLSDDGCEKFSKIGSLKVLNLG 260
++L GC T++ S +++ L YL + ++ G + +L L+L
Sbjct: 108 IDLSGCNATSST--SATSVAGLKYLAKLPITSLVIQDAGMTSVGARALAASDTLTSLDLR 165
Query: 261 FNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
N+ITD L L +LNLD+ IG +G L L L L ++ +G + L
Sbjct: 166 GNKITDLGAQALATSRTLTTLNLDTNTIGAKGAQALAASRTLTTLNLRGNKIEDAGAQAL 225
Query: 321 SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
+ T L S++ I ++ LA SL +LNL I D G AL + LT LDL
Sbjct: 226 AASTTLTSLSAEGCRIGLAGVQALAASRSLTTLNLAGNNIDDAGAQALAASRTLTTLDLS 285
Query: 381 GARITDSGAAYLRNFKNLRSLEI------CGGGLTDAGLTGLVSLNVSNSRITSAGLRHL 434
+I D+GA L + L SLE+ G A L +LN+S++ + AG + L
Sbjct: 286 ANKIGDAGALALAASRTLASLEVDHCEIGAAGAQALATSDSLAALNISHNPVGDAGAQAL 345
Query: 435 KPLKNLRSLTLESCKV 450
+ L S+ + C++
Sbjct: 346 AICRTLTSIKAKDCQI 361
>gi|413949465|gb|AFW82114.1| hypothetical protein ZEAMMB73_510951 [Zea mays]
Length = 606
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 185/437 (42%), Gaps = 86/437 (19%)
Query: 15 VYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSG 73
V+ R + EV L F VN +W+ + S L + L+ ++ +
Sbjct: 69 VFGRSVEEVDLSGFL-------------SVNSEWLAYLGS-FRYLRVLKLADCKNINNDA 114
Query: 74 LIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINL 133
+ L + L+ LD + C +ISD G++H+ + +L L +T G+ + L NL
Sbjct: 115 VWSLSGMNTLKELDLSRCKKISDAGIKHIVTIESLEKLHLSETE-LTDNGVMLISSLTNL 173
Query: 134 VKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
LDL L +L+ L KLE L+I W + T+ L L SL ++ ++V
Sbjct: 174 SFLDLGGILMTDKTLQSLQVLTKLEHLDI-WGSETTNEGASALKSFARLLSLNLALTRVN 232
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAAC-------------LDSLSALG------------ 228
I + LN+ C + + C + S + G
Sbjct: 233 HLSIP-----PTTSYLNMSNCEIHSICDVDSEVPVPLENFIVSAATFGNIDKVFSSIQAS 287
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL-TNLESLNLDSCG 287
SL +L+L+ C+LS+ K+ +L+ L+L +N ITD + H+ + TNL+ L+L + G
Sbjct: 288 SLIHLDLSSCKLSN--LSFLEKMKNLEHLDLSYNIITDGAIEHIAKIGTNLQYLSLKNTG 345
Query: 288 IGDEGLVNLTG-LCNLKCLELSDTQVGSSGLRHL-------------------------- 320
I + L L G + NL L L++T++ S L ++
Sbjct: 346 ITSQALCILAGTVPNLTSLSLANTKIDDSALAYIGMIPLLRTIDLSQTSIKGFIHTEVNS 405
Query: 321 ---------SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 371
L LES+NL T +S + LA ++LK L L + ++D L AL++
Sbjct: 406 EKLLSMSAFEHLKYLESLNLEDTPLSAEVIPPLASFATLKYLYLKSDFLSDPALHALSAA 465
Query: 372 TGLTHLDLFGARITDSG 388
+ L HL G ++ G
Sbjct: 466 SNLIHLGFRGNILSSFG 482
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 168/366 (45%), Gaps = 32/366 (8%)
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLV-NLKGLMKLESLNIKWCNCITDSDMKPL 176
++ ++ + L L L C I+ V +L G+ L+ L++ C I+D+ +K +
Sbjct: 84 SVNSEWLAYLGSFRYLRVLKLADCKNINNDAVWSLSGMNTLKELDLSRCKKISDAGIKHI 143
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+ +L+ L +S +++TD+G+ + L L+ L+L G +T L SL L L +L++
Sbjct: 144 VTIESLEKLHLSETELTDNGVMLISSLTNLSFLDLGGILMTDKTLQSLQVLTKLEHLDIW 203
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS-CGIGDEGLVN 295
+ +++G L LNL + + N+ + + S C + E V
Sbjct: 204 GSETTNEGASALKSFARLLSLNLALTRVNHLSIPPTTSYLNMSNCEIHSICDVDSEVPVP 263
Query: 296 LTGLC-------------------NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
L +L L+LS ++ S L L + NLE ++LS+ I
Sbjct: 264 LENFIVSAATFGNIDKVFSSIQASSLIHLDLSSCKL--SNLSFLEKMKNLEHLDLSYNII 321
Query: 337 SDGSLRKLAGL-SSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFGARITDSGAAYLRN 394
+DG++ +A + ++L+ L+L IT L L ++ LT L L +I DS AY+
Sbjct: 322 TDGAIEHIAKIGTNLQYLSLKNTGITSQALCILAGTVPNLTSLSLANTKIDDSALAYIGM 381
Query: 395 FKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAND 454
LR+++ L+ + G + V++ ++ S + + LK L SL LE ++A
Sbjct: 382 IPLLRTID-----LSQTSIKGFIHTEVNSEKLLS--MSAFEHLKYLESLNLEDTPLSAEV 434
Query: 455 IKRLQS 460
I L S
Sbjct: 435 IPPLAS 440
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 95/172 (55%), Gaps = 3/172 (1%)
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGL 317
GF + E L +L L L L C I ++ + +L+G+ LK L+LS ++ +G+
Sbjct: 81 GFLSVNSEWLAYLGSFRYLRVLKLADCKNINNDAVWSLSGMNTLKELDLSRCKKISDAGI 140
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
+H+ + +LE ++LS T ++D + ++ L++L L+L +TD L +L LT L HL
Sbjct: 141 KHIVTIESLEKLHLSETELTDNGVMLISSLTNLSFLDLGGILMTDKTLQSLQVLTKLEHL 200
Query: 378 DLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS-LNVSNSRITS 428
D++G+ T+ GA+ L++F L SL + + + S LN+SN I S
Sbjct: 201 DIWGSETTNEGASALKSFARLLSLNLALTRVNHLSIPPTTSYLNMSNCEIHS 252
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 113/239 (47%), Gaps = 26/239 (10%)
Query: 55 QGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGL-SNLTSLSF 113
Q SSL+ +DLS + S L L+ NL+ LD ++ I I+DG +EH+ + +NL LS
Sbjct: 285 QASSLIHLDLSSCKL--SNLSFLEKMKNLEHLDLSYNI-ITDGAIEHIAKIGTNLQYLSL 341
Query: 114 RRNNAITAQGMKAFAGLI-NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
+ N IT+Q + AG + NL L L T+I + G++ L D
Sbjct: 342 K-NTGITSQALCILAGTVPNLTSLSLAN-TKIDDSALAYIGMIPLLR--------TIDLS 391
Query: 173 MKPLSGLTNLKSLQISCSKV-TDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
+ G + +++ K+ + S +LK L+ L NLE P++A + L++ +L
Sbjct: 392 QTSIKGFIHT---EVNSEKLLSMSAFEHLKYLESL---NLEDTPLSAEVIPPLASFATLK 445
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGF--NEITDECLVHLKGLTNLESLNLDSCGI 288
YL L LSD S +L ++LGF N ++ L+ L L+L C I
Sbjct: 446 YLYLKSDFLSDPALHALSAASNL--IHLGFRGNILSSFGLLQFVPPVTLCVLDLSGCWI 502
>gi|320163275|gb|EFW40174.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 989
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 204/466 (43%), Gaps = 64/466 (13%)
Query: 4 RDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVD 63
+++ Q+ +LV + L++ ++ F C LQ + L YP
Sbjct: 460 QEVGMQLMAQLVRDKQLSDKNMGVFLPCHLQVIRLDAYPY-------------------- 499
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF---RRNNAIT 120
VT+ L ++ S LQ L ++ G+ H+ GL+NL L R N+
Sbjct: 500 -----VTNELLCAMRFFSLLQELSIRSAEFVTHVGINHIAGLNNLRVLDLGITRLND--- 551
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGL-MKLESLNIKWCNCITDSDMKPLSGL 179
Q M + L L L+LER GL L L L+ L+I C+ +T+ + L+
Sbjct: 552 -QAMPTISQL-PLTVLNLERTLITDSGLARLAPLGATLQHLDISDCSKLTERGLALLAAF 609
Query: 180 TNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ 239
L++L I+ +TD G L +L LNL + LDS+ L +L+L +
Sbjct: 610 PQLRTLAIAGLPLTDVG--RLSNFPELRSLNLARTAIVEGKLDSIRRYIHLVHLSLANTK 667
Query: 240 LSDDGCEKFSKIGSLKVLNLGFN-EITDECLVHLKGLTNLESLNL-DSCGIGDEGLVNLT 297
L D+ + +L L L +I + + H+ L L L+L D + DEG+ ++
Sbjct: 668 LGDNDVRYLQYLTNLSSLKLPSRFQIGNSSIAHISKLP-LTELDLTDYIHVTDEGIQFIS 726
Query: 298 GLC-NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
L L L LS+T++ S+G+ ++ T LE + L T + D + LA L+ L++L+L
Sbjct: 727 ALAPTLVSLSLSNTKLTSAGIPAVAACTKLEVLQLDRTPLKDDVIPLLAPLTRLRTLSLS 786
Query: 357 ARQITDTGL--AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT 414
+T + A + T L L+L I + G LR L
Sbjct: 787 RTHLTSAVVRSGAFSPFTRLESLNLSWTFIENQGLDQLR-------------------LP 827
Query: 415 GLVSLNVSNSRITSA---GLRHLKPLKNLRSLTLESCKVTANDIKR 457
L +LN+ ++R+T+ L L L +R + + S + TA +++R
Sbjct: 828 MLTTLNLDSTRVTANVPLMLTQLPALTTVRMVGIVSEEDTAFEMER 873
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 85/154 (55%), Gaps = 7/154 (4%)
Query: 312 VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 371
V G+ H++GL NL ++L T ++D ++ ++ L L LNL+ ITD+GLA L L
Sbjct: 525 VTHVGINHIAGLNNLRVLDLGITRLNDQAMPTISQLP-LTVLNLERTLITDSGLARLAPL 583
Query: 372 -TGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDAG----LTGLVSLNVSNSR 425
L HLD+ +++T+ G A L F LR+L I G LTD G L SLN++ +
Sbjct: 584 GATLQHLDISDCSKLTERGLALLAAFPQLRTLAIAGLPLTDVGRLSNFPELRSLNLARTA 643
Query: 426 ITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
I L ++ +L L+L + K+ ND++ LQ
Sbjct: 644 IVEGKLDSIRRYIHLVHLSLANTKLGDNDVRYLQ 677
>gi|334117579|ref|ZP_08491670.1| Adenylate cyclase [Microcoleus vaginatus FGP-2]
gi|333460688|gb|EGK89296.1| Adenylate cyclase [Microcoleus vaginatus FGP-2]
Length = 516
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 181/369 (49%), Gaps = 36/369 (9%)
Query: 97 GGLEHLRGLSNLTSLSFRRNNAITAQG-MKAFAGLINLVKLDLERCTRIHGGLVNLKGLM 155
G + L L+NLT L N A G +K A L NL +L+L G + L L
Sbjct: 100 GDITPLASLTNLTVLDLGFN----ALGDIKPLASLTNLTRLNL--FGNQIGDIKPLASLT 153
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 215
KL L + N I D+KPL+ LTNL L +S ++V D I L L LT L+L+G
Sbjct: 154 KLTELTLN-NNKI--GDIKPLASLTNLTDLVLSSNQVGD--IKPLASLTNLTRLDLDGNV 208
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
+ + L++L +L L+L+ + D + + + +L L+L N+I D + L L
Sbjct: 209 I--GDIKPLASLTNLTRLDLDGNVIGD--IKPLASLTNLSSLDLDDNQIGD--IKPLASL 262
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 335
TNL L+L IGD + L L NL L L D Q+G ++ L+ LTNL + LS
Sbjct: 263 TNLMGLDLRRIVIGD--IKPLASLTNLTDLSLDDNQIGD--IKPLASLTNLTRLVLSSNQ 318
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF 395
I D ++ LA L++L SL+L I D + L SLT L+ LDL +I D L +
Sbjct: 319 IRD--IKPLASLTNLSSLDLSGNVIGD--IKPLASLTNLSSLDLNNNKIGD--IKPLASL 372
Query: 396 KNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
L L + G + D A LT L SL + + I ++ L L NL SL L+ +
Sbjct: 373 TKLTELTLSGNVIGDIKPLASLTNLSSLVLFGNVI--GDIKPLASLTNLSSLVLDGNVI- 429
Query: 452 ANDIKRLQS 460
DIK L S
Sbjct: 430 -GDIKALAS 437
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 111/323 (34%), Positives = 158/323 (48%), Gaps = 45/323 (13%)
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
D+ PL+ LTNL L + + + D I L L LT LNL G + + L++L L
Sbjct: 101 DITPLASLTNLTVLDLGFNALGD--IKPLASLTNLTRLNLFGNQI--GDIKPLASLTKLT 156
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD- 290
L LN ++ D + + + +L L L N++ D + L LTNL L+LD IGD
Sbjct: 157 ELTLNNNKIGD--IKPLASLTNLTDLVLSSNQVGD--IKPLASLTNLTRLDLDGNVIGDI 212
Query: 291 ---EGLVNLT----------------GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
L NLT L NL L+L D Q+G ++ L+ LTNL ++L
Sbjct: 213 KPLASLTNLTRLDLDGNVIGDIKPLASLTNLSSLDLDDNQIGD--IKPLASLTNLMGLDL 270
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
I G ++ LA L++L L+LD QI D + L SLT LT L L +I D
Sbjct: 271 RRIVI--GDIKPLASLTNLTDLSLDDNQIGD--IKPLASLTNLTRLVLSSNQIRD--IKP 324
Query: 392 LRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 447
L + NL SL++ G + D A LT L SL+++N++I ++ L L L LTL
Sbjct: 325 LASLTNLSSLDLSGNVIGDIKPLASLTNLSSLDLNNNKI--GDIKPLASLTKLTELTLSG 382
Query: 448 CKVTANDIKRLQS-RDLPNLVSF 469
+ DIK L S +L +LV F
Sbjct: 383 NVI--GDIKPLASLTNLSSLVLF 403
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 123/276 (44%), Gaps = 37/276 (13%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L S+DL + + D + L +NL LD +I G ++ L L+NLT LS N
Sbjct: 241 TNLSSLDLDDNQIGD--IKPLASLTNLMGLDLR---RIVIGDIKPLASLTNLTDLSLDDN 295
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+K A L NL +L L +I + L L L SL++ N I D+KPL
Sbjct: 296 QI---GDIKPLASLTNLTRLVLS-SNQIRD-IKPLASLTNLSSLDLS-GNVI--GDIKPL 347
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV-TAACLDSLSALGSLFYLN- 234
+ LTNL SL ++ +K+ D I L L KLT L L G + L SL+ L SL
Sbjct: 348 ASLTNLSSLDLNNNKIGD--IKPLASLTKLTELTLSGNVIGDIKPLASLTNLSSLVLFGN 405
Query: 235 -----------LNRCQLSDDG-----CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
N L DG + + + +L L L N I D + L LTNL
Sbjct: 406 VIGDIKPLASLTNLSSLVLDGNVIGDIKALASLTNLAGLFLSSNVIGD--IKPLASLTNL 463
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS 314
SL+L IGD + L L NL L LS +
Sbjct: 464 SSLDLSDNHIGD--IKPLASLTNLIELHLSGNPIAP 497
>gi|41393121|ref|NP_958890.1| F-box and leucine-rich repeat protein 14a [Danio rerio]
gi|37681873|gb|AAQ97814.1| hypothetical protein MGC40195 [Danio rerio]
gi|66911816|gb|AAH96775.1| F-box and leucine-rich repeat protein 14a [Danio rerio]
gi|157423043|gb|AAI53540.1| Fbxl14a protein [Danio rerio]
gi|182891432|gb|AAI64514.1| Fbxl14a protein [Danio rerio]
Length = 411
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 168/327 (51%), Gaps = 32/327 (9%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L
Sbjct: 68 RGIKKVQILSLRRSLSYVIQGMP------NIESLNLSGCYNLTDNGLGHAFVQDIPSLRI 121
Query: 160 LNIKWCNCITDSDMKPLSG-LTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGC-P 215
LN+ C ITDS + ++ L NL+ L + CS +T++G+ + GL L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIAQYLKNLELLDLGGCSNITNTGLLLIAWGLHNLKSLNLRSCRH 181
Query: 216 VTAACLDSLSALG--------SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-NEI 264
V+ + L+ + +L +L L CQ L+D + SK + LKVLNL F I
Sbjct: 182 VSDVGIGHLAGMTRSAAEGCLTLEHLTLQDCQKLTDLSLKHISKGLNKLKVLNLSFCGGI 241
Query: 265 TDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS 321
+D ++HL +T L +LNL SC I D G+++L+ G L L++S +VG L +++
Sbjct: 242 SDAGMIHLSHMTQLWTLNLRSCDNISDTGIMHLSMGALRLYGLDVSFCDKVGDQSLAYIA 301
Query: 322 -GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALT-SLTGLTHL 377
GL L+S++L ISD + R + + LK+LN+ +ITD GL + LT LT +
Sbjct: 302 QGLYQLKSLSLCSCHISDDGINRMVRQMHELKTLNIGQCVRITDKGLELIADHLTQLTGI 361
Query: 378 DLFG-ARITDSGAAYLRNFKNLRSLEI 403
DL+G +IT G + L+ L +
Sbjct: 362 DLYGCTKITKRGLERITQLPCLKVLNL 388
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 172/328 (52%), Gaps = 50/328 (15%)
Query: 61 SVDLSG-SDVTDSGLIH--LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
S++LSG ++TD+GL H ++D +L+ L+ + C QI+D L +
Sbjct: 94 SLNLSGCYNLTDNGLGHAFVQDIPSLRILNLSLCKQITDSSLGRI--------------- 138
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRI--HGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
AQ +K NL LDL C+ I G L+ GL L+SLN++ C ++D +
Sbjct: 139 ---AQYLK------NLELLDLGGCSNITNTGLLLIAWGLHNLKSLNLRSCRHVSDVGIGH 189
Query: 176 LSGLT--------NLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSL 224
L+G+T L+ L + C K+TD + ++ KGL KL +LNL C ++ A + L
Sbjct: 190 LAGMTRSAAEGCLTLEHLTLQDCQKLTDLSLKHISKGLNKLKVLNLSFCGGISDAGMIHL 249
Query: 225 SALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLE 279
S + L+ LNL C +SD G S +G+L++ L++ F +++ D+ L ++ +GL L+
Sbjct: 250 SHMTQLWTLNLRSCDNISDTGIMHLS-MGALRLYGLDVSFCDKVGDQSLAYIAQGLYQLK 308
Query: 280 SLNLDSCGIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTG 335
SL+L SC I D+G+ + + LK L + ++ GL ++ LT L I+L T
Sbjct: 309 SLSLCSCHISDDGINRMVRQMHELKTLNIGQCVRITDKGLELIADHLTQLTGIDLYGCTK 368
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQITDT 363
I+ L ++ L LK LNL Q+T+
Sbjct: 369 ITKRGLERITQLPCLKVLNLGLWQMTEV 396
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 140/283 (49%), Gaps = 33/283 (11%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEH 101
+ D + IA +L +DL G S++T++GL+ + NL+SL+ C +SD G+ H
Sbjct: 130 ITDSSLGRIAQYLKNLELLDLGGCSNITNTGLLLIAWGLHNLKSLNLRSCRHVSDVGIGH 189
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLES 159
L G++ A G + L L L+ C ++ L ++ KGL KL+
Sbjct: 190 LAGMTR-----------------SAAEGCLTLEHLTLQDCQKLTDLSLKHISKGLNKLKV 232
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGCPVT 217
LN+ +C I+D+ M LS +T L +L + SC ++D+GI +L G +L L++ C
Sbjct: 233 LNLSFCGGISDAGMIHLSHMTQLWTLNLRSCDNISDTGIMHLSMGALRLYGLDVSFCDKV 292
Query: 218 AACLDSLSALGSLFY----LNLNRCQLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVH 271
SL+ + Y L+L C +SDDG + + + LK LN+G ITD+ L
Sbjct: 293 GD--QSLAYIAQGLYQLKSLSLCSCHISDDGINRMVRQMHELKTLNIGQCVRITDKGLEL 350
Query: 272 LK-GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQV 312
+ LT L ++L C I GL +T L LK L L Q+
Sbjct: 351 IADHLTQLTGIDLYGCTKITKRGLERITQLPCLKVLNLGLWQM 393
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 118/255 (46%), Gaps = 65/255 (25%)
Query: 272 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 322
++G+ N+ESLNL C G+G + ++ L L C +++D+ +G R
Sbjct: 86 IQGMPNIESLNLSGCYNLTDNGLGHAFVQDIPSLRILNLSLCKQITDSSLG----RIAQY 141
Query: 323 LTNLESINL-SFTGISDGSLRKLA-GLSSLKSLNLDA-RQITDTGLAALTSLT------- 372
L NLE ++L + I++ L +A GL +LKSLNL + R ++D G+ L +T
Sbjct: 142 LKNLELLDLGGCSNITNTGLLLIAWGLHNLKSLNLRSCRHVSDVGIGHLAGMTRSAAEGC 201
Query: 373 -GLTHLDLFG-ARITDSGAAYLR---NFKNLRSLEICGGGLTDAG------LTGLVSLNV 421
L HL L ++TD ++ N + +L C GG++DAG +T L +LN+
Sbjct: 202 LTLEHLTLQDCQKLTDLSLKHISKGLNKLKVLNLSFC-GGISDAGMIHLSHMTQLWTLNL 260
Query: 422 -SNSRITSAGLRHL---------------------------KPLKNLRSLTLESCKVTAN 453
S I+ G+ HL + L L+SL+L SC ++ +
Sbjct: 261 RSCDNISDTGIMHLSMGALRLYGLDVSFCDKVGDQSLAYIAQGLYQLKSLSLCSCHISDD 320
Query: 454 DIKRL--QSRDLPNL 466
I R+ Q +L L
Sbjct: 321 GINRMVRQMHELKTL 335
>gi|406830031|ref|ZP_11089625.1| leucine-rich repeat-containing protein [Schlesneria paludicola DSM
18645]
Length = 306
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 117/238 (49%), Gaps = 8/238 (3%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
+ +TD K L+ L +L ++ S + D+ + + L +L L L+ VT A L S+S
Sbjct: 59 HSMTDDAAKQLTAFPALTTLALTDSPIGDAHMGVIGALTQLESLALDHTQVTDAGLQSIS 118
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
+L L LNL C ++D G + + L LNL +I LV+L L LE+L L +
Sbjct: 119 SLEHLRELNLAGCSVTDGGLGSLAGLTELTSLNLNDTQINGLGLVYLSKLNRLEALYLQN 178
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
+ E + L+GL +LK L L+ T+ G +R ++GL +LE + L+ T I D + LA
Sbjct: 179 TVVDFESIPPLSGLESLKILHLAGTKTGGGIVRAITGLPSLERLYLNGTSIKDEDIPALA 238
Query: 346 GL-----SSLKSLNLDARQITDTGLAALTSLTGL---THLDLFGARITDSGAAYLRNF 395
+ K L ++ ++D L + L L T + + G ++T G LR
Sbjct: 239 AVLAQNCPHFKGLFVEKTALSDAALEPMHPLADLKEFTLIHVHGTKVTKDGVVRLRKL 296
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 129/289 (44%), Gaps = 43/289 (14%)
Query: 185 LQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
+ +S +TD L LT L L P+ A + + AL L L L+ Q++D G
Sbjct: 54 VSLSSHSMTDDAAKQLTAFPALTTLALTDSPIGDAHMGVIGALTQLESLALDHTQVTDAG 113
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
+ S + L+ LNL +TD L L GLT L SLNL+ I GLV L+ L L+
Sbjct: 114 LQSISSLEHLRELNLAGCSVTDGGLGSLAGLTELTSLNLNDTQINGLGLVYLSKLNRLEA 173
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 364
L L +T V + LSGL +L+ ++L+ T G +R + GL SL+ L L+ I D
Sbjct: 174 LYLQNTVVDFESIPPLSGLESLKILHLAGTKTGGGIVRAITGLPSLERLYLNGTSIKDED 233
Query: 365 LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNS 424
+ AL ++ A +FK L V +
Sbjct: 234 IPALAAVL----------------AQNCPHFKGLF---------------------VEKT 256
Query: 425 RITSAGLRHLKPLKNLRSLTL---ESCKVTANDIKRLQSRDLP--NLVS 468
++ A L + PL +L+ TL KVT + + RL+ + LP N+VS
Sbjct: 257 ALSDAALEPMHPLADLKEFTLIHVHGTKVTKDGVVRLR-KLLPEANVVS 304
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 43/261 (16%)
Query: 25 LEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQ 84
L AF AL L L P + D M VI + + L S+ L + VTD+GL + +L+
Sbjct: 69 LTAFP--ALTTLALTDSP-IGDAHMGVIGAL-TQLESLALDHTQVTDAGLQSISSLEHLR 124
Query: 85 SLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI 144
L+ C ++DGGL L GL+ LTSL+ T+I
Sbjct: 125 ELNLAGC-SVTDGGLGSLAGLTELTSLNLND--------------------------TQI 157
Query: 145 HG-GLVNLKGLMKLESLNIKWCNCITDSD-MKPLSGLTNLKSLQISCSKVTDSGIAYLKG 202
+G GLV L L +LE+L ++ N + D + + PLSGL +LK L ++ +K + + G
Sbjct: 158 NGLGLVYLSKLNRLEALYLQ--NTVVDFESIPPLSGLESLKILHLAGTKTGGGIVRAITG 215
Query: 203 LQKLTLLNLEGCPVTAACLDSLSAL-----GSLFYLNLNRCQLSDDGCEKFSKIGSLK-- 255
L L L L G + + +L+A+ L + + LSD E + LK
Sbjct: 216 LPSLERLYLNGTSIKDEDIPALAAVLAQNCPHFKGLFVEKTALSDAALEPMHPLADLKEF 275
Query: 256 -VLNLGFNEITDECLVHLKGL 275
++++ ++T + +V L+ L
Sbjct: 276 TLIHVHGTKVTKDGVVRLRKL 296
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 8/227 (3%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
V LS +TD L L +L I D + + L+ L SL+ +T
Sbjct: 54 VSLSSHSMTDDAAKQLTAFPALTTLALTDS-PIGDAHMGVIGALTQLESLALDHTQ-VTD 111
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
G+++ + L +L +L+L C+ GGL +L GL +L SLN+ I + LS L
Sbjct: 112 AGLQSISSLEHLRELNLAGCSVTDGGLGSLAGLTELTSLNLNDTQ-INGLGLVYLSKLNR 170
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
L++L + + V I L GL+ L +L+L G + +++ L SL L LN +
Sbjct: 171 LEALYLQNTVVDFESIPPLSGLESLKILHLAGTKTGGGIVRAITGLPSLERLYLNGTSIK 230
Query: 242 DDGCEKFSKI-----GSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
D+ + + K L + ++D L + L +L+ L
Sbjct: 231 DEDIPALAAVLAQNCPHFKGLFVEKTALSDAALEPMHPLADLKEFTL 277
>gi|290991310|ref|XP_002678278.1| predicted protein [Naegleria gruberi]
gi|284091890|gb|EFC45534.1| predicted protein [Naegleria gruberi]
Length = 346
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 128/261 (49%), Gaps = 3/261 (1%)
Query: 149 VNLKGLMKLESLN-IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
+N + L ++ ++N +K C+CI D + L NL +L ++C K+ D G+ + +++LT
Sbjct: 71 INGQFLQRIVAVNGMKKCDCIPFLDQ--VFDLKNLTTLDVNCMKIKDEGVKIISEMKQLT 128
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
LN+ ++ + +S + L LN++R + +G S++ L LN+ N I E
Sbjct: 129 NLNVGSSGISVEGVKYISGMNQLTNLNISRNNIRAEGARYVSEMKLLTNLNIYLNGIRAE 188
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
++ + L LN+ S I D+G +L + L L ++ + G + +S + +L
Sbjct: 189 GTKYISEMKELTCLNIMSNAIHDKGAEHLRQMPKLNTLNINSNSISVEGAKFISEIQSLT 248
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDS 387
++++ F I D ++ ++ + L L I + G ++ + LT L++ +
Sbjct: 249 NLDIGFNTIGDDGVKFISKMEKLTKLYTMYINIGEKGAKHISEMEQLTSLNINSNNVGTE 308
Query: 388 GAAYLRNFKNLRSLEICGGGL 408
GA YL K+L + IC +
Sbjct: 309 GAKYLCEMKHLTYMNICNNNV 329
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 12/215 (5%)
Query: 253 SLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQV 312
+L L++ +I DE + + + L +LN+ S GI EG+ ++G+ L L +S +
Sbjct: 102 NLTTLDVNCMKIKDEGVKIISEMKQLTNLNVGSSGISVEGVKYISGMNQLTNLNISRNNI 161
Query: 313 GSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT 372
+ G R++S + L ++N+ GI + ++ + L LN+ + I D G L +
Sbjct: 162 RAEGARYVSEMKLLTNLNIYLNGIRAEGTKYISEMKELTCLNIMSNAIHDKGAEHLRQMP 221
Query: 373 GLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG---------LTGLVSLNVSN 423
L L++ I+ GA ++ ++L +L+I + D G LT L ++ ++
Sbjct: 222 KLNTLNINSNSISVEGAKFISEIQSLTNLDIGFNTIGDDGVKFISKMEKLTKLYTMYIN- 280
Query: 424 SRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
I G +H+ ++ L SL + S V K L
Sbjct: 281 --IGEKGAKHISEMEQLTSLNINSNNVGTEGAKYL 313
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 85/175 (48%), Gaps = 6/175 (3%)
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
L NL +L+++ I DEG+ ++ + L L + + + G++++SG+ L ++N+S
Sbjct: 100 LKNLTTLDVNCMKIKDEGVKIISEMKQLTNLNVGSSGISVEGVKYISGMNQLTNLNISRN 159
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
I R ++ + L +LN+ I G ++ + LT L++ I D GA +LR
Sbjct: 160 NIRAEGARYVSEMKLLTNLNIYLNGIRAEGTKYISEMKELTCLNIMSNAIHDKGAEHLRQ 219
Query: 395 FKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSL 443
L +L I ++ G + L +L++ + I G++ + ++ L L
Sbjct: 220 MPKLNTLNINSNSISVEGAKFISEIQSLTNLDIGFNTIGDDGVKFISKMEKLTKL 274
>gi|21674346|ref|NP_662411.1| Rab family protein [Chlorobium tepidum TLS]
gi|21647522|gb|AAM72753.1| Rab family protein [Chlorobium tepidum TLS]
Length = 1102
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 157/311 (50%), Gaps = 21/311 (6%)
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
+ ++ L L SL++ W SD+ PL L +L LQ+S +++TD IA L L+ LT
Sbjct: 97 ITDIAPLASLNSLSMLWLFGNKISDIAPLESLKSLTELQLSSNQITD--IAPLASLKSLT 154
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
L+L G ++ L +L SL L+L+ Q++D + + SL L+L N+I+D
Sbjct: 155 ELSLSGNNISDIA--PLESLKSLTELSLSSNQITD--IAPLASLKSLTELSLSSNQISD- 209
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
+ L+ L +L L L I D + L L +L L+LS Q+ + + L+ L +L
Sbjct: 210 -IAPLESLKSLTELQLSRNQISD--IAPLESLKSLTELQLSSNQI--TDIAPLASLKSLT 264
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDS 387
+ LS ISD + L L+SL L L+ QITD +A L SL LT L+L +ITD
Sbjct: 265 ELQLSRNQISD--IAPLESLNSLSKLWLNGNQITD--IAPLASLNSLTELELSSNQITD- 319
Query: 388 GAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 447
A L + K+L +L + ++D + S ++ + + PL +L SLT
Sbjct: 320 -IAPLASLKSLSTLWLSSNQISDIAPLASLESLSELSLSSNQ-ISDISPLASLNSLT--G 375
Query: 448 CKVTANDIKRL 458
V N IKRL
Sbjct: 376 FDVRRNPIKRL 386
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 41/277 (14%)
Query: 190 SKVTDSGIAYLKGLQKLTLLNLEGCPVT-AACLDSLSALGSLFYL--------------N 234
+++TD I+ L L L++L L+ +T A L SL++L L+ +
Sbjct: 73 NQITD--ISPLASLNSLSMLWLDRNQITDIAPLASLNSLSMLWLFGNKISDIAPLESLKS 130
Query: 235 LNRCQLSDDGCEKFSKIGSLK---VLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
L QLS + + + SLK L+L N I+D + L+ L +L L+L S I D
Sbjct: 131 LTELQLSSNQITDIAPLASLKSLTELSLSGNNISD--IAPLESLKSLTELSLSSNQITD- 187
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
+ L L +L L LS Q+ S + L L +L + LS ISD + L L SL
Sbjct: 188 -IAPLASLKSLTELSLSSNQI--SDIAPLESLKSLTELQLSRNQISD--IAPLESLKSLT 242
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD- 410
L L + QITD +A L SL LT L L +I+D A L + +L L + G +TD
Sbjct: 243 ELQLSSNQITD--IAPLASLKSLTELQLSRNQISD--IAPLESLNSLSKLWLNGNQITDI 298
Query: 411 ---AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
A L L L +S+++IT + PL +L+SL+
Sbjct: 299 APLASLNSLTELELSSNQITD-----IAPLASLKSLS 330
>gi|198456933|ref|XP_001360491.2| GA22149 [Drosophila pseudoobscura pseudoobscura]
gi|198135799|gb|EAL25066.2| GA22149 [Drosophila pseudoobscura pseudoobscura]
Length = 529
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 189/374 (50%), Gaps = 68/374 (18%)
Query: 7 SQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG 66
S +FN LV R + +V + + R +L+DL LG +L S++LSG
Sbjct: 193 SPSLFNCLV-RRGIKKVQILSLRR-SLKDLVLGV----------------PALTSLNLSG 234
Query: 67 S-DVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGL----EHLRGLSNLTSLSFRRNNAI 119
+V D L H D NL++LD + C QI+D L +HLR NL +L I
Sbjct: 235 CFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGRIAQHLR---NLENLELGGCCNI 291
Query: 120 TAQGMKAFA-GLINLVKLDLERCTRIH-GGLVNLKGL--------MKLESLNIKWCNCIT 169
T G+ A GL L L+L C I G+ +L G ++LE L ++ C ++
Sbjct: 292 TNTGLLLIAWGLKKLRHLNLRSCWHISDQGIGHLAGFSRETAEGNLQLEHLGLQDCQRLS 351
Query: 170 DSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
D + ++ GLT+LKS+ +S C VTDSG+ +L + KL LNL C D++S +
Sbjct: 352 DEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC-------DNISDI 404
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDS 285
G + L++ G S I SL V F ++I+D+ L H+ +GL L SL+L+
Sbjct: 405 GMAY--------LTEGG----SGINSLDV---SFCDKISDQALTHIAQGLYRLRSLSLNQ 449
Query: 286 CGIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSL 341
C I D+G+V + L L+ L + +++ GL+ L+ LTNL++I+L T +S +
Sbjct: 450 CQITDQGMVKIAKSLQELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGI 509
Query: 342 RKLAGLSSLKSLNL 355
+ L L+ LNL
Sbjct: 510 DIIMKLPKLQKLNL 523
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 164/329 (49%), Gaps = 57/329 (17%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAF-----AGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
RG+ + LS RR+ G+ A +G N+ ++L H V+L L
Sbjct: 203 RGIKKVQILSLRRSLKDLVLGVPALTSLNLSGCFNVADMNLG-----HAFSVDLP---NL 254
Query: 158 ESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGC 214
++L++ C ITD+ + ++ L NL++L++ C +T++G+ + GL+KL LNL C
Sbjct: 255 KTLDLSLCKQITDTSLGRIAQHLRNLENLELGGCCNITNTGLLLIAWGLKKLRHLNLRSC 314
Query: 215 PVTA-------ACLDSLSALGSLF--YLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A +A G+L +L L CQ LSD+ ++ + SLK +NL F
Sbjct: 315 WHISDQGIGHLAGFSRETAEGNLQLEHLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCV 374
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS 321
+TD L HL + LE LNL SC I D G+ LT G SG+
Sbjct: 375 SVTDSGLKHLARMPKLEQLNLRSCDNISDIGMAYLTE--------------GGSGI---- 416
Query: 322 GLTNLESINLSF-TGISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLD 378
S+++SF ISD +L +A GL L+SL+L+ QITD G+ + SL L +L+
Sbjct: 417 -----NSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDQGMVKIAKSLQELENLN 471
Query: 379 LFG-ARITDSGAAYL-RNFKNLRSLEICG 405
+ +RITD G L + NL+++++ G
Sbjct: 472 IGQCSRITDKGLQTLAEDLTNLKTIDLYG 500
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 112/209 (53%), Gaps = 16/209 (7%)
Query: 69 VTDSGLIHLKDCS--------NLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAI 119
++D G+ HL S L+ L C ++SD L H+ +GL++L S++ ++
Sbjct: 317 ISDQGIGHLAGFSRETAEGNLQLEHLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSV 376
Query: 120 TAQGMKAFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKPLS 177
T G+K A + L +L+L C I G+ L +G + SL++ +C+ I+D + ++
Sbjct: 377 TDSGLKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIA 436
Query: 178 -GLTNLKSLQISCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSA-LGSLFYL 233
GL L+SL ++ ++TD G+ + K LQ+L LN+ C +T L +L+ L +L +
Sbjct: 437 QGLYRLRSLSLNQCQITDQGMVKIAKSLQELENLNIGQCSRITDKGLQTLAEDLTNLKTI 496
Query: 234 NLNRC-QLSDDGCEKFSKIGSLKVLNLGF 261
+L C QLS G + K+ L+ LNLG
Sbjct: 497 DLYGCTQLSSKGIDIIMKLPKLQKLNLGL 525
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 130/264 (49%), Gaps = 47/264 (17%)
Query: 202 GLQKLTLLNLEGCPVTAACLDSLSA----LGSLFYLNLNRC-QLSDDGCEKFSK-IGSLK 255
G+ LT LNL GC A ++ A L +L L+L+ C Q++D + ++ + +L+
Sbjct: 223 GVPALTSLNLSGC-FNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGRIAQHLRNLE 281
Query: 256 VLNLG--FNEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQV 312
L LG N L+ GL L LNL SC I D+G+ +L G +T
Sbjct: 282 NLELGGCCNITNTGLLLIAWGLKKLRHLNLRSCWHISDQGIGHLAGFSR-------ETAE 334
Query: 313 GSSGLRHLSGLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALTS 370
G+ L HL GL + + + SD +L +A GL+SLKS+NL +TD+GL L
Sbjct: 335 GNLQLEHL-GLQDCQRL-------SDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLAR 386
Query: 371 LTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN-SRITS 428
+ L L+L I+D G AYL T+ G +G+ SL+VS +I+
Sbjct: 387 MPKLEQLNLRSCDNISDIGMAYL----------------TEGG-SGINSLDVSFCDKISD 429
Query: 429 AGLRHL-KPLKNLRSLTLESCKVT 451
L H+ + L LRSL+L C++T
Sbjct: 430 QALTHIAQGLYRLRSLSLNQCQIT 453
>gi|51850107|dbj|BAD42395.1| leucine-rich repeat protein [Ralstonia solanacearum]
Length = 538
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 185/435 (42%), Gaps = 62/435 (14%)
Query: 1 MLPRDISQQI--------FNELVYSRCLTEVSLEA-FRDCALQD-------LCLGQYPGV 44
LP DI ++I L + + ++EA R+ ++D L G YP
Sbjct: 66 QLPPDIFREIARRSDPLTVQRLRVASKPVKAAIEADMRELVIKDRAGLAGVLRAGNYP-- 123
Query: 45 NDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI-QISDGGLEHLR 103
+L + L+G+ TD L L ++L++LD + C I+ G+ HL
Sbjct: 124 -------------ALEKLTLAGT-FTDDDLRGLP--ASLKALDLSRCRGPITAAGIAHLS 167
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
L L L+ R N I A+G + A L L++ G L +L +LN+
Sbjct: 168 RLP-LVRLNVR-NKRIGAEGARLLANHPTLTSLNVSNGRIGPEGAQALAANTRLTTLNVS 225
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
N I + K L+ L+SL +S +++ D G L AAC
Sbjct: 226 -GNRIGVAGAKALAANQTLRSLDVSDNRIGDEGAREL-----------------AACTQ- 266
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
L L+ NR + DG + +L L +G NEI D ++ L L +LN+
Sbjct: 267 ------LTTLDANRNGIGVDGATALAASRTLTSLAIGGNEIGDAGVLALAANARLTTLNV 320
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
+S G+G +G+ L L L L +G++G L+ T+L +++L + I +
Sbjct: 321 ESTGVGADGVKALAASKTLTWLRLDGNDIGNAGATALAASTSLTTLHLEHSRIGAEGAQA 380
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
LA + L +L+L I D G+ L++ L L + + D+ A L K L +L+I
Sbjct: 381 LAANTKLTTLDLGYNDIGDAGVRTLSANATLVWLSVRRNNLEDASAVSLAAGKTLTTLDI 440
Query: 404 CGGGLTDAGLTGLVS 418
G G+ D G L +
Sbjct: 441 SGNGIQDQGAKALAA 455
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 3/276 (1%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
+L S+D+S + + D G L C+ L +LD N I G L LTSL+ N
Sbjct: 242 TLRSLDVSDNRIGDEGARELAACTQLTTLDANRN-GIGVDGATALAASRTLTSLAIG-GN 299
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS 177
I G+ A A L L++E G+ L L L + N I ++ L+
Sbjct: 300 EIGDAGVLALAANARLTTLNVESTGVGADGVKALAASKTLTWLRLD-GNDIGNAGATALA 358
Query: 178 GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
T+L +L + S++ G L KLT L+L + A + +LSA +L +L++ R
Sbjct: 359 ASTSLTTLHLEHSRIGAEGAQALAANTKLTTLDLGYNDIGDAGVRTLSANATLVWLSVRR 418
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
L D + +L L++ N I D+ L L +L++ S I + G L
Sbjct: 419 NNLEDASAVSLAAGKTLTTLDISGNGIQDQGAKALAANPTLTTLDVSSNDIRNAGARALA 478
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
L L+L + ++ SG R L L S+ +S
Sbjct: 479 ANARLVSLDLRNNRMEESGTRALLANRTLSSLGVSL 514
>gi|290977411|ref|XP_002671431.1| leucine rich repeat protein [Naegleria gruberi]
gi|284085000|gb|EFC38687.1| leucine rich repeat protein [Naegleria gruberi]
Length = 389
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 139/310 (44%), Gaps = 29/310 (9%)
Query: 130 LINLVKLDLERC----TRIHGGLVNLKGLMKLESLNIKWC-------------------- 165
L N+ K+ L C I G + LK +L S++I +C
Sbjct: 68 LHNISKIKLRACDDYLESIKGLMEILKSYDQLRSVDIGYCYIGNSQTISEMKQLTSLDID 127
Query: 166 -NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE--GCPVTAACLD 222
NC+ + +K + L NL L I C+++ G + G++++ LN+ G V A L
Sbjct: 128 NNCVDEQGVKLIGELHNLTRLNIGCNRIGLEGFKSISGMKQMRDLNVSSSGAGVEGAKL- 186
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
+S L L N++ ++ ++G + ++ L +L++ N+I E + L L L
Sbjct: 187 -MSQLKHLTKFNISGNEIGEEGAKSIGELKWLTMLDICSNQIGAEGAKSISQLERLTKLY 245
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
+ GIG EG +++ L +L L + Q+GS G + +S L L + + I
Sbjct: 246 ISGNGIGPEGAQSISQLSHLTTLFIGGNQIGSKGSKSISQLKRLTILYIDSNEIGSEGAN 305
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
++ LS+LK L + QI D G +++ L LT L++ I D GA + K L L
Sbjct: 306 SISQLSNLKELYISDNQIGDEGAKSISQLKHLTTLEILRNEIGDQGAKSISQLKQLTRLH 365
Query: 403 ICGGGLTDAG 412
I + D G
Sbjct: 366 ISCNRIGDQG 375
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 118/290 (40%), Gaps = 53/290 (18%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
LK L+S+D +C G + + + LTSL NN + QG+K L NL +L
Sbjct: 93 LKSYDQLRSVDIGYCY---IGNSQTISEMKQLTSLDID-NNCVDEQGVKLIGELHNLTRL 148
Query: 137 DLERCTRIH-GGLVNLKGLMKLESLNI--------------------------------- 162
++ C RI G ++ G+ ++ LN+
Sbjct: 149 NI-GCNRIGLEGFKSISGMKQMRDLNVSSSGAGVEGAKLMSQLKHLTKFNISGNEIGEEG 207
Query: 163 -------KW-------CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTL 208
KW N I K +S L L L IS + + G + L LT
Sbjct: 208 AKSIGELKWLTMLDICSNQIGAEGAKSISQLERLTKLYISGNGIGPEGAQSISQLSHLTT 267
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
L + G + + S+S L L L ++ ++ +G S++ +LK L + N+I DE
Sbjct: 268 LFIGGNQIGSKGSKSISQLKRLTILYIDSNEIGSEGANSISQLSNLKELYISDNQIGDEG 327
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
+ L +L +L + IGD+G +++ L L L +S ++G G +
Sbjct: 328 AKSISQLKHLTTLEILRNEIGDQGAKSISQLKQLTRLHISCNRIGDQGAK 377
>gi|440802686|gb|ELR23615.1| leucine rich repeat domain containing protein, partial
[Acanthamoeba castellanii str. Neff]
Length = 431
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 184/404 (45%), Gaps = 26/404 (6%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLS 61
LP ++ ++I L + LT +LE F+ ++ L L V D W+DV+ SSL
Sbjct: 29 LPIEVIERILLYLHRTERLTLEALEFFKAFPVETLFLSNIRAVEDTWLDVLKGY-SSLTY 87
Query: 62 VDLSGS-DVTDSGLIH-LKDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNA 118
+DLS S +TD+GL LK L+SL + C +I+D GL L NL +
Sbjct: 88 LDLSNSYRITDTGLAECLKCMPQLRSLFVDRCKRITDAGLAPLGTHCPNLRRVHVG-GTM 146
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
IT + A L +L + + TR L L+K + W + D +
Sbjct: 147 ITYYALAALNSLEDLQDVSVN-GTRFPDK--ALYTLLKRKEAPDSWA----EEDYGEVRQ 199
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGL-QKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN- 236
LT+ Q S + V D G+ LKGL L LNL P A L +L SL +L+++
Sbjct: 200 LTDF---QASRTLVRDDGVRLLKGLGASLHTLNLAFNPGIADW-SFLGSLASLTHLDISL 255
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL-VN 295
+D K+ SL +LNL E+TDE + L L+ L SL++ I L
Sbjct: 256 NVGFTDQFAADVGKLSSLTLLNLSKTELTDEGIPALMELSQLRSLDVGKTAITHRALGPG 315
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAG-LSSLKSLN 354
L L NL L L T VG R+L+ L L S + G L G L +L+
Sbjct: 316 LAKLPNLTALSLPYTNVGGKFSRYLTVLHRLTSFK------TTGLLELAKGRYPHLTALD 369
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 398
+ Q+TD+GLA + L L + +++ ++T+ GA ++ L
Sbjct: 370 VGCDQLTDSGLAHIGELAALRNFNMWNTKVTNQGAELVQQLTGL 413
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 161/402 (40%), Gaps = 96/402 (23%)
Query: 130 LINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISC 189
+I + L L R R+ + +E+L + + D+ + L G ++L L +S
Sbjct: 33 VIERILLYLHRTERLTLEALEFFKAFPVETLFLSNIRAVEDTWLDVLKGYSSLTYLDLSN 92
Query: 190 S-KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEK 247
S ++TD+G+A CL + L SLF ++RC+ ++D G
Sbjct: 93 SYRITDTGLA--------------------ECLKCMPQLRSLF---VDRCKRITDAGLAP 129
Query: 248 F-SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG-------- 298
+ +L+ +++G IT L L L +L+ ++++ D+ L L
Sbjct: 130 LGTHCPNLRRVHVGGTMITYYALAALNSLEDLQDVSVNGTRFPDKALYTLLKRKEAPDSW 189
Query: 299 -------LCNLKCLELSDTQVGSSGLRHLSGL-TNLESINLSF-TGISDGSLRKLAGLSS 349
+ L + S T V G+R L GL +L ++NL+F GI+D S L L+S
Sbjct: 190 AEEDYGEVRQLTDFQASRTLVRDDGVRLLKGLGASLHTLNLAFNPGIADWSF--LGSLAS 247
Query: 350 LKSLNLD-------------------------ARQITDTGLAALTSLTGLTHLDLFGARI 384
L L++ ++TD G+ AL L+ L LD+ I
Sbjct: 248 LTHLDISLNVGFTDQFAADVGKLSSLTLLNLSKTELTDEGIPALMELSQLRSLDVGKTAI 307
Query: 385 TD----SGAAYLRNFKNLRSLEICGGG-----------LTDAGLTGLV-----------S 418
T G A L N L GG LT TGL+ +
Sbjct: 308 THRALGPGLAKLPNLTALSLPYTNVGGKFSRYLTVLHRLTSFKTTGLLELAKGRYPHLTA 367
Query: 419 LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
L+V ++T +GL H+ L LR+ + + KVT + +Q
Sbjct: 368 LDVGCDQLTDSGLAHIGELAALRNFNMWNTKVTNQGAELVQQ 409
>gi|302753328|ref|XP_002960088.1| hypothetical protein SELMODRAFT_437235 [Selaginella moellendorffii]
gi|300171027|gb|EFJ37627.1| hypothetical protein SELMODRAFT_437235 [Selaginella moellendorffii]
Length = 657
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 211/466 (45%), Gaps = 78/466 (16%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
G+ D + ++A L ++DLS ++VTD GL + +L+ L+ C + DGGL L
Sbjct: 190 GITDIGIALVAVNCKQLRTLDLSYTEVTDEGLASIATLHSLEVLNLVSCNNVDDGGLRSL 249
Query: 103 -RGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRIHGGLVN---------- 150
R +L L R + ++ G+ A A ++L +L L C+ I L+
Sbjct: 250 KRSCRSLLKLDVSRCSNVSDAGLAALATSHLSLEQLTLSYCSIITDDLLATFQKFDHLQS 309
Query: 151 ----------------LKGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQISCSK-V 192
+G +L+ L++ C +TD + ++ G T L L ++C + +
Sbjct: 310 IVLDGCEIARNGLPFIARGCKQLKELSLSKCRGVTDRGIAAVAQGCTALHKLNLTCCREL 369
Query: 193 TDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGS----LFYLNLNRCQLSDDGCEK 247
TD+ + + K + L L +E C + D L LG L L+ C +SD G +
Sbjct: 370 TDASLCRISKDCKGLESLKMESCSLITE--DGLCGLGEGCPRLEELDFTECNMSDTGLKY 427
Query: 248 FSKIGSLKVLNLGF-NEITDECLVHLKG-LTNLESLNL-DSCGIGDEGLVNLTGLCNLKC 304
SK +L+ L LGF + ITD+ + H+ NL L+ S GIGD G+ +
Sbjct: 428 ISKCTALRSLKLGFCSTITDKGVAHIGARCCNLRELDFYRSKGIGDAGVAAIA------- 480
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQITD 362
SG L+ ++LS+ + I+D SL+ L+ L L+ L L ++
Sbjct: 481 ----------------SGCPKLKLLDLSYCSKITDCSLQSLSQLRELQRLELRGCVLVSS 524
Query: 363 TGLAALTS-LTGLTHLDL-FGARITDSGAAYLRNF-KNLRSLEICGGGLTDAGLTGLVSL 419
TGLA + S LT +D+ ++I ++G + L F LR + I ++ AGL L L
Sbjct: 525 TGLAVMASGCKRLTEIDIKRCSQIGNAGVSALSFFCPGLRMMNISYCPISKAGLLSLPRL 584
Query: 420 NVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 465
+ + S L HLK ++T++ + K L++ LP+
Sbjct: 585 SC----LQSVRLVHLK------NVTVDCFVTVLQNCKSLKNVKLPS 620
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 135/467 (28%), Positives = 211/467 (45%), Gaps = 82/467 (17%)
Query: 56 GSSLLSVDLS---GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLS 112
G+ L S++LS G GL+ C++L +D ++C + D + L +SNL +L
Sbjct: 99 GNRLASINLSRVGGFTSAGLGLLARSCCASLTDVDLSYCSNLKDSDVLALAQISNLQALR 158
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
++IT G+ A ++KL L +K C ITD
Sbjct: 159 LTGCHSITDIGLGCLAAGCKMLKL-----------------------LTLKGCLGITDIG 195
Query: 173 MKPLS-GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLS-ALGS 229
+ ++ L++L +S ++VTD G+A + L L +LNL C V L SL + S
Sbjct: 196 IALVAVNCKQLRTLDLSYTEVTDEGLASIATLHSLEVLNLVSCNNVDDGGLRSLKRSCRS 255
Query: 230 LFYLNLNRCQ-LSDDGCEKFSKIG-SLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC 286
L L+++RC +SD G + SL+ L L + + ITD+ L + +L+S+ LD C
Sbjct: 256 LLKLDVSRCSNVSDAGLAALATSHLSLEQLTLSYCSIITDDLLATFQKFDHLQSIVLDGC 315
Query: 287 GIGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSFT-GISDGSLR 342
I GL + C LK L LS + V G+ ++ G T L +NL+ ++D SL
Sbjct: 316 EIARNGLPFIARGCKQLKELSLSKCRGVTDRGIAAVAQGCTALHKLNLTCCRELTDASLC 375
Query: 343 KLA----GLSSLK-----------------------SLNLDARQITDTGLAALTSLTGLT 375
+++ GL SLK L+ ++DTGL ++ T L
Sbjct: 376 RISKDCKGLESLKMESCSLITEDGLCGLGEGCPRLEELDFTECNMSDTGLKYISKCTALR 435
Query: 376 HLDL-FGARITDSGAAYL-RNFKNLRSLEIC-GGGLTDAGLTGLVS-------LNVSN-S 424
L L F + ITD G A++ NLR L+ G+ DAG+ + S L++S S
Sbjct: 436 SLKLGFCSTITDKGVAHIGARCCNLRELDFYRSKGIGDAGVAAIASGCPKLKLLDLSYCS 495
Query: 425 RITSAGLRHLKPLKNLRSLTLESC--------KVTANDIKRLQSRDL 463
+IT L+ L L+ L+ L L C V A+ KRL D+
Sbjct: 496 KITDCSLQSLSQLRELQRLELRGCVLVSSTGLAVMASGCKRLTEIDI 542
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 4/163 (2%)
Query: 29 RDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLS-GSDVTDSGLIHLKDCSNLQSLD 87
R C L++L + G+ D + IAS L +DLS S +TD L L LQ L+
Sbjct: 456 RCCNLRELDFYRSKGIGDAGVAAIASGCPKLKLLDLSYCSKITDCSLQSLSQLRELQRLE 515
Query: 88 FNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLI-NLVKLDLERCTRIH 145
C+ +S GL + G LT + +R + I G+ A + L +++ C
Sbjct: 516 LRGCVLVSSTGLAVMASGCKRLTEIDIKRCSQIGNAGVSALSFFCPGLRMMNISYCPISK 575
Query: 146 GGLVNLKGLMKLESLN-IKWCNCITDSDMKPLSGLTNLKSLQI 187
GL++L L L+S+ + N D + L +LK++++
Sbjct: 576 AGLLSLPRLSCLQSVRLVHLKNVTVDCFVTVLQNCKSLKNVKL 618
>gi|356551924|ref|XP_003544322.1| PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max]
Length = 652
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 130/470 (27%), Positives = 222/470 (47%), Gaps = 74/470 (15%)
Query: 20 LTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGS-DVTD--SGLI 75
LT+V+ +A + L+ LCLG+ G+ D + IA + S L V L VTD +GLI
Sbjct: 139 LTDVAAKAIAEAVNLERLCLGRCKGITDLGIGCIAVRCSKLRHVGLRWCIRVTDFGAGLI 198
Query: 76 HLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF-AGLINLV 134
+K C ++SLD ++ + I++ L H+ L +L L I G+ A ++
Sbjct: 199 AIK-CKEIRSLDLSY-LPITEKCLNHILQLEHLEDLILEHCLGIEDHGLATLQASCKSMK 256
Query: 135 KLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
L+L +C I H G+ +L SG NL+ L +S S +
Sbjct: 257 MLNLSKCQNIGHIGIASLT------------------------SGSQNLEKLILSSSVIV 292
Query: 194 DSGIAY-LKGLQKLTLLNLEGCPVTAACLDSLSALG-SLFYLNLNRCQ-LSDDG------ 244
+ +A L+ +L + L+ C T + L ++ LG SL LNL++C ++D+
Sbjct: 293 TTDLAKCLQSFSRLQSVKLDSCLGTKSGLKAIGNLGASLKELNLSKCVGVTDENLPFLVQ 352
Query: 245 ----CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGL 299
EK + + + +T+ CL L SL ++SC + EG + G
Sbjct: 353 PHKDLEKLDITCCHTITHASISSLTNSCL-------RLTSLRMESCSLVSREGFL-FIGR 404
Query: 300 CN-LKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLA-GLSSLKSLNL- 355
C L+ L+++DT++ GL+ +S T L S+ L + I+D L+ +A S LK L+L
Sbjct: 405 CQLLEELDVTDTEIDDQGLQSISRCTKLSSLKLGICSMITDNGLKHIASSCSKLKQLDLY 464
Query: 356 DARQITDTGLAALTSLTGLTHLDL----FGARITDSGAAYLRNFKNLRSLEICG-GGLTD 410
+ +ITD G+ A+ G L++ + + TD+ +L + LR+LEI G ++
Sbjct: 465 RSSRITDEGIVAIA--LGCPSLEVVNIAYNSNTTDTSLEFLSKCQKLRTLEIRGCPRISP 522
Query: 411 AGLTGLVS-------LNVSN-SRITSAGLRHL-KPLKNLRSLTLESCKVT 451
GL+ +V+ L++ +I G+ L + +NL+ + L C VT
Sbjct: 523 KGLSNIVARCRYLEMLDIKKCHKINDTGMIQLAQHSQNLKHIKLSYCSVT 572
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 41/302 (13%)
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
C C+ ++D+ LT+ V IA L++L L +G +T + +
Sbjct: 125 CTCLVEADLSNRPDLTD----------VAAKAIAEAVNLERLCLGRCKG--ITDLGIGCI 172
Query: 225 SALGS-LFYLNLNRC-QLSDDGCEKFS-KIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
+ S L ++ L C +++D G + K ++ L+L + IT++CL H+ L +LE L
Sbjct: 173 AVRCSKLRHVGLRWCIRVTDFGAGLIAIKCKEIRSLDLSYLPITEKCLNHILQLEHLEDL 232
Query: 282 NLDSC-GIGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHL-SGLTNLESINLSFTGIS 337
L+ C GI D GL L C ++K L LS Q +G G+ L SG NLE + LS + I
Sbjct: 233 ILEHCLGIEDHGLATLQASCKSMKMLNLSKCQNIGHIGIASLTSGSQNLEKLILSSSVIV 292
Query: 338 DGSLRK-LAGLSSLKSLNLDARQITDTGLAALTSL-TGLTHLDLFGAR-ITDSGAAYL-R 393
L K L S L+S+ LD+ T +GL A+ +L L L+L +TD +L +
Sbjct: 293 TTDLAKCLQSFSRLQSVKLDSCLGTKSGLKAIGNLGASLKELNLSKCVGVTDENLPFLVQ 352
Query: 394 NFKNLRSLEI-CGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
K+L L+I C +T A ++ L T++ LR L SL +ESC + +
Sbjct: 353 PHKDLEKLDITCCHTITHASISSL----------TNSCLR-------LTSLRMESCSLVS 395
Query: 453 ND 454
+
Sbjct: 396 RE 397
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 33/188 (17%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNN 117
L +D++ +++ D GL + C+ L SL C I+D GL+H+ S L L R++
Sbjct: 408 LEELDVTDTEIDDQGLQSISRCTKLSSLKLGICSMITDNGLKHIASSCSKLKQLDLYRSS 467
Query: 118 AITAQGMKAFA------GLINLV--------------------KLDLERCTRIHG-GLVN 150
IT +G+ A A ++N+ L++ C RI GL N
Sbjct: 468 RITDEGIVAIALGCPSLEVVNIAYNSNTTDTSLEFLSKCQKLRTLEIRGCPRISPKGLSN 527
Query: 151 LKGLMK-LESLNIKWCNCITDSDMKPLSGLT-NLKSLQISCSKVTDSG---IAYLKGLQK 205
+ + LE L+IK C+ I D+ M L+ + NLK +++S VTD G +A + LQ
Sbjct: 528 IVARCRYLEMLDIKKCHKINDTGMIQLAQHSQNLKHIKLSYCSVTDVGLIALASISCLQH 587
Query: 206 LTLLNLEG 213
+++ ++EG
Sbjct: 588 ISIFHVEG 595
>gi|302804592|ref|XP_002984048.1| hypothetical protein SELMODRAFT_445748 [Selaginella moellendorffii]
gi|300148400|gb|EFJ15060.1| hypothetical protein SELMODRAFT_445748 [Selaginella moellendorffii]
Length = 657
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 212/466 (45%), Gaps = 78/466 (16%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
G+ D + ++A L ++DLS ++VTD GL + +L+ L+ C + DGGL L
Sbjct: 190 GITDIGIALVAVNCKQLRTLDLSYTEVTDEGLASIATLHSLEVLNLVSCNNVDDGGLRSL 249
Query: 103 -RGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRIHGGLVN---------- 150
R +L L R + ++ G+ A A ++L +L L C+ I L+
Sbjct: 250 KRSCRSLLKLDVSRCSNVSDAGLAALATSHLSLEQLTLSYCSIITDDLLATFQKFDHLQS 309
Query: 151 ----------------LKGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQISCSK-V 192
+G +L+ L++ C +TD + ++ G T L L ++C + +
Sbjct: 310 IVLDGCEIARNGLPFIARGCKQLKELSLSKCRGVTDRGIAAVAQGCTALHKLNLTCCREL 369
Query: 193 TDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGS----LFYLNLNRCQLSDDGCEK 247
TD+ + + K + L L +E C + D L LG L L+ C +SD G +
Sbjct: 370 TDASLCRISKDCKGLESLKMESCSLITE--DGLCGLGEGCPRLEELDFTECNMSDTGLKY 427
Query: 248 FSKIGSLKVLNLGF-NEITDECLVHLKG-LTNLESLNL-DSCGIGDEGLVNLTGLCNLKC 304
SK +L+ L LGF + ITD+ + H+ NL L+ S GIGD G+ +
Sbjct: 428 ISKCTALRSLKLGFCSTITDKGVAHIGARCCNLRELDFYRSKGIGDAGVAAIA------- 480
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQITD 362
SG L+ ++LS+ + I+D SL+ L+ L L+ + L ++
Sbjct: 481 ----------------SGCPKLKLLDLSYCSKITDCSLQSLSQLRELQRVELRGCVLVSS 524
Query: 363 TGLAALTS-LTGLTHLDL-FGARITDSGAAYLRNF-KNLRSLEICGGGLTDAGLTGLVSL 419
TGLA + S LT +D+ ++I ++G + L F LR + I +++AGL L L
Sbjct: 525 TGLAVMASGCKRLTEIDIKRCSQIGNAGVSALSFFCPGLRMMNISYCPISNAGLLSLPRL 584
Query: 420 NVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 465
+ + S L HLK ++T++ + K L++ LP+
Sbjct: 585 SC----LQSVRLVHLK------NVTVDCFVTVLQNCKSLKNVKLPS 620
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 211/467 (45%), Gaps = 82/467 (17%)
Query: 56 GSSLLSVDLS---GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLS 112
G+ L S++LS G GL+ C++L +D ++C + D + L +SNL +L
Sbjct: 99 GNRLASINLSRVGGFTSAGLGLLARSCCASLTDVDLSYCSNLKDSDVLALAQISNLQALR 158
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
++IT G+ A ++KL L +K C ITD
Sbjct: 159 LTGCHSITDIGLGCLAAGCKMLKL-----------------------LTLKGCLGITDIG 195
Query: 173 MKPLS-GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLS-ALGS 229
+ ++ L++L +S ++VTD G+A + L L +LNL C V L SL + S
Sbjct: 196 IALVAVNCKQLRTLDLSYTEVTDEGLASIATLHSLEVLNLVSCNNVDDGGLRSLKRSCRS 255
Query: 230 LFYLNLNRCQ-LSDDGCEKFSKIG-SLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC 286
L L+++RC +SD G + SL+ L L + + ITD+ L + +L+S+ LD C
Sbjct: 256 LLKLDVSRCSNVSDAGLAALATSHLSLEQLTLSYCSIITDDLLATFQKFDHLQSIVLDGC 315
Query: 287 GIGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSFT-GISDGSLR 342
I GL + C LK L LS + V G+ ++ G T L +NL+ ++D SL
Sbjct: 316 EIARNGLPFIARGCKQLKELSLSKCRGVTDRGIAAVAQGCTALHKLNLTCCRELTDASLC 375
Query: 343 KLA----GLSSLK-----------------------SLNLDARQITDTGLAALTSLTGLT 375
+++ GL SLK L+ ++DTGL ++ T L
Sbjct: 376 RISKDCKGLESLKMESCSLITEDGLCGLGEGCPRLEELDFTECNMSDTGLKYISKCTALR 435
Query: 376 HLDL-FGARITDSGAAYL-RNFKNLRSLEIC-GGGLTDAGLTGLVS-------LNVSN-S 424
L L F + ITD G A++ NLR L+ G+ DAG+ + S L++S S
Sbjct: 436 SLKLGFCSTITDKGVAHIGARCCNLRELDFYRSKGIGDAGVAAIASGCPKLKLLDLSYCS 495
Query: 425 RITSAGLRHLKPLKNLRSLTLESC--------KVTANDIKRLQSRDL 463
+IT L+ L L+ L+ + L C V A+ KRL D+
Sbjct: 496 KITDCSLQSLSQLRELQRVELRGCVLVSSTGLAVMASGCKRLTEIDI 542
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 28/162 (17%)
Query: 29 RDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDF 88
R C L++L + G+ D + IAS C L+ LD
Sbjct: 456 RCCNLRELDFYRSKGIGDAGVAAIAS------------------------GCPKLKLLDL 491
Query: 89 NFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRI-HG 146
++C +I+D L+ L L L + R +++ G+ A G L ++D++RC++I +
Sbjct: 492 SYCSKITDCSLQSLSQLRELQRVELRGCVLVSSTGLAVMASGCKRLTEIDIKRCSQIGNA 551
Query: 147 GLVNLKGLMK-LESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
G+ L L +NI +C I+++ + L L+ L+S+++
Sbjct: 552 GVSALSFFCPGLRMMNISYCP-ISNAGLLSLPRLSCLQSVRL 592
>gi|348514973|ref|XP_003445014.1| PREDICTED: F-box/LRR-repeat protein 14-like [Oreochromis niloticus]
gi|410918767|ref|XP_003972856.1| PREDICTED: F-box/LRR-repeat protein 14-like [Takifugu rubripes]
Length = 400
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 168/327 (51%), Gaps = 32/327 (9%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMP------NIESLNLSGCYNLTDNGLGHAFVQEIPSLRV 121
Query: 160 LNIKWCNCITDSDMKPLSG-LTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGC-P 215
LN+ C ITDS + ++ L NL+ L++ CS +T++G+ + GL +L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIAQYLKNLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCRH 181
Query: 216 VTAACLDSLSALG--------SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-NEI 264
V+ + L+ + +L YL L CQ L+D + SK + L+VLNL F I
Sbjct: 182 VSDVGIGHLAGMTRSAAEGCLNLEYLTLQDCQKLTDLSLKHISKGLTKLRVLNLSFCGGI 241
Query: 265 TDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRHLS 321
+D ++HL +T+L SLNL SC I D G ++L G L L++S ++G L +++
Sbjct: 242 SDAGMIHLSHMTSLWSLNLRSCDNISDTGTMHLAMGTLRLSGLDVSFCDKIGDQTLAYIA 301
Query: 322 -GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALT-SLTGLTHL 377
GL L+S++L ISD + R + + L++LN+ +ITD GL + LT L +
Sbjct: 302 QGLYQLKSLSLCSCHISDDGINRMVRQMHELRTLNIGQCVRITDKGLELIADHLTQLVGI 361
Query: 378 DLFG-ARITDSGAAYLRNFKNLRSLEI 403
DL+G +IT G + L+ L +
Sbjct: 362 DLYGCTKITKRGLERITQLPCLKVLNL 388
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 141/286 (49%), Gaps = 33/286 (11%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEH 101
+ D + IA +L ++L G S++T++GL+ + L+SL+ C +SD G+ H
Sbjct: 130 ITDSSLGRIAQYLKNLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSDVGIGH 189
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLES 159
L G++ A G +NL L L+ C ++ L ++ KGL KL
Sbjct: 190 LAGMTR-----------------SAAEGCLNLEYLTLQDCQKLTDLSLKHISKGLTKLRV 232
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGCPVT 217
LN+ +C I+D+ M LS +T+L SL + SC ++D+G +L G +L+ L++ C
Sbjct: 233 LNLSFCGGISDAGMIHLSHMTSLWSLNLRSCDNISDTGTMHLAMGTLRLSGLDVSFCDKI 292
Query: 218 AACLDSLSALGSLFY----LNLNRCQLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVH 271
+L+ + Y L+L C +SDDG + + + L+ LN+G ITD+ L
Sbjct: 293 GD--QTLAYIAQGLYQLKSLSLCSCHISDDGINRMVRQMHELRTLNIGQCVRITDKGLEL 350
Query: 272 LK-GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSS 315
+ LT L ++L C I GL +T L LK L L Q+ S
Sbjct: 351 IADHLTQLVGIDLYGCTKITKRGLERITQLPCLKVLNLGLWQMTES 396
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 95/197 (48%), Gaps = 39/197 (19%)
Query: 272 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 322
++G+ N+ESLNL C G+G + + L L C +++D+ +G R
Sbjct: 86 IQGMPNIESLNLSGCYNLTDNGLGHAFVQEIPSLRVLNLSLCKQITDSSLG----RIAQY 141
Query: 323 LTNLESINLS-FTGISDGSLRKLA-GLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL 379
L NLE + L + I++ L +A GL LKSLNL + R ++D G+ L
Sbjct: 142 LKNLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSDVGIGHL----------- 190
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTD-------AGLTGLVSLNVSN-SRITSAGL 431
A +T S A N + L +L+ C LTD GLT L LN+S I+ AG+
Sbjct: 191 --AGMTRSAAEGCLNLEYL-TLQDCQK-LTDLSLKHISKGLTKLRVLNLSFCGGISDAGM 246
Query: 432 RHLKPLKNLRSLTLESC 448
HL + +L SL L SC
Sbjct: 247 IHLSHMTSLWSLNLRSC 263
>gi|406831321|ref|ZP_11090915.1| hypothetical protein SpalD1_06780 [Schlesneria paludicola DSM
18645]
Length = 785
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 125/246 (50%), Gaps = 23/246 (9%)
Query: 177 SGLTNLKSLQIS------CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
+G L++L I CS++TD+ + L GL++L L L G VT+ L ++ L
Sbjct: 541 AGTAQLRALPIVGLNLELCSQLTDATFSSLSGLKQLVALVLSGTNVTSTGLTQVAENLPL 600
Query: 231 FYLNLNRCQ-LSDDGCEKFSKIGSLKVLNL---GFNE--ITDECLVHLKGLTNLESLNLD 284
L L C ++DD C + L+ LNL GF + I+D L LK LT LE LNL
Sbjct: 601 VALELELCDAINDDVCLTLGSMKRLRWLNLKKSGFEKRGISDIGLEQLKTLTELEMLNLY 660
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT------GISD 338
+ D GL++L L L+ L+LS + +G+ LS L +LE +NL FT ++D
Sbjct: 661 GNKVTDAGLIHLQSLKRLRDLDLSLLNLNDAGIESLSPLISLERLNLMFTEGFAGPSLTD 720
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 398
+ R L L L LNL+ ++TD+GL L L L L + ++T+SG R
Sbjct: 721 RATRSLTPLQQLTWLNLNGSKLTDSGLEQLQELNQLRTLHVVRTKVTESGREKFR----- 775
Query: 399 RSLEIC 404
R+L C
Sbjct: 776 RALPEC 781
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 122/263 (46%), Gaps = 27/263 (10%)
Query: 60 LSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAI 119
L ++L G+ ++D+G L+ + L+ C Q++D L GL L +L N +
Sbjct: 529 LILNLEGARISDAGTAQLRALP-IVGLNLELCSQLTDATFSSLSGLKQLVALVLSGTN-V 586
Query: 120 TAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGL 179
T+ G+ A + LV L+LE C I+ + C+T MK L L
Sbjct: 587 TSTGLTQVAENLPLVALELELCDAINDDV------------------CLTLGSMKRLRWL 628
Query: 180 TNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ 239
NLK ++D G+ LK L +L +LNL G VT A L L +L L L+L+
Sbjct: 629 -NLKKSGFEKRGISDIGLEQLKTLTELEMLNLYGNKVTDAGLIHLQSLKRLRDLDLSLLN 687
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNE------ITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
L+D G E S + SL+ LNL F E +TD L L L LNL+ + D GL
Sbjct: 688 LNDAGIESLSPLISLERLNLMFTEGFAGPSLTDRATRSLTPLQQLTWLNLNGSKLTDSGL 747
Query: 294 VNLTGLCNLKCLELSDTQVGSSG 316
L L L+ L + T+V SG
Sbjct: 748 EQLQELNQLRTLHVVRTKVTESG 770
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 129/276 (46%), Gaps = 53/276 (19%)
Query: 240 LSDDGC---EKFSKIGSLK---VLNLGFNEITDECLVHLKGLTNLESLNLDSCG-IGDEG 292
LS DG E S++ LK +LNL I+D L+ L + LNL+ C + D
Sbjct: 508 LSADGTISSEIVSQLALLKGRLILNLEGARISDAGTAQLRALP-IVGLNLELCSQLTDAT 566
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISD------GSLRKLA 345
+L+GL L L LS T V S+GL ++ L ++ L I+D GS+++L
Sbjct: 567 FSSLSGLKQLVALVLSGTNVTSTGLTQVAENLPLVALELELCDAINDDVCLTLGSMKRLR 626
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK--------- 396
L+ LK + R I+D GL L +LT L L+L+G ++TD+G +L++ K
Sbjct: 627 WLN-LKKSGFEKRGISDIGLEQLKTLTELEMLNLYGNKVTDAGLIHLQSLKRLRDLDLSL 685
Query: 397 ------------NLRSLE---------ICGGGLTDAG------LTGLVSLNVSNSRITSA 429
L SLE G LTD L L LN++ S++T +
Sbjct: 686 LNLNDAGIESLSPLISLERLNLMFTEGFAGPSLTDRATRSLTPLQQLTWLNLNGSKLTDS 745
Query: 430 GLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 465
GL L+ L LR+L + KVT + ++ + R LP
Sbjct: 746 GLEQLQELNQLRTLHVVRTKVTESGREKFR-RALPE 780
>gi|46447568|ref|YP_008933.1| hypothetical protein pc1934 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401209|emb|CAF24658.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 261
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 138/255 (54%), Gaps = 30/255 (11%)
Query: 206 LTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNE 263
L LNL GC +T A L L+ L +L +LNL+RC +L+D G + + +L+ L L + E
Sbjct: 3 LKYLNLSGCSKLTNAGLAHLTPLKTLQHLNLSRCSRLTDAGLAHLTPLTALQHLGLSYCE 62
Query: 264 -ITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHL 320
+TD L HL LT L+ L L +C + D GLV+LT L +L+ L+LS+ + GL HL
Sbjct: 63 NLTDAGLAHLALLTALQDLALANCKHLTDVGLVHLTPLTSLQHLDLSNCMNLTDDGLVHL 122
Query: 321 SGLTNLESINLS-FTGISDGSLRKLAGLSSLKSLNLD--ARQITDTGLAALTSLTGLTHL 377
+ LT L+ + LS ++D L L L++L++L L + +T GLA L LT L L
Sbjct: 123 TPLTALQHLVLSGCDNLTDAGLAHLTPLTALQTLGLRRWCQNLTGDGLAHLAPLTALQTL 182
Query: 378 DL-FGARITDSGAAYLRNFKNLRSL--EICGGGLTDAGLTGLVSLNVSNSRITSAGLRHL 434
DL + + D+G A+L L++L + C S++T AGL HL
Sbjct: 183 DLSYCKNLKDAGLAHLTPLTALQTLGLKWC-------------------SKLTDAGLAHL 223
Query: 435 KPLKNLRSLTLESCK 449
KPL L+ L L C+
Sbjct: 224 KPLAALQHLDLSHCR 238
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 128/241 (53%), Gaps = 8/241 (3%)
Query: 62 VDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
++LSG S +T++GL HL LQ L+ + C +++D GL HL L+ L L +T
Sbjct: 6 LNLSGCSKLTNAGLAHLTPLKTLQHLNLSRCSRLTDAGLAHLTPLTALQHLGLSYCENLT 65
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGL 179
G+ A L L L L C + GLV+L L L+ L++ C +TD + L+ L
Sbjct: 66 DAGLAHLALLTALQDLALANCKHLTDVGLVHLTPLTSLQHLDLSNCMNLTDDGLVHLTPL 125
Query: 180 TNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNL-EGCP-VTAACLDSLSALGSLFYLNLN 236
T L+ L +S C +TD+G+A+L L L L L C +T L L+ L +L L+L+
Sbjct: 126 TALQHLVLSGCDNLTDAGLAHLTPLTALQTLGLRRWCQNLTGDGLAHLAPLTALQTLDLS 185
Query: 237 RCQ-LSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGL 293
C+ L D G + + +L+ L L + +++TD L HLK L L+ L+L C + D GL
Sbjct: 186 YCKNLKDAGLAHLTPLTALQTLGLKWCSKLTDAGLAHLKPLAALQHLDLSHCRSLTDAGL 245
Query: 294 V 294
Sbjct: 246 A 246
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 57 SSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
++L ++DLS ++ D+GL HL + LQ+L +C +++D GL HL+ L+ L L
Sbjct: 177 TALQTLDLSYCKNLKDAGLAHLTPLTALQTLGLKWCSKLTDAGLAHLKPLAALQHLDLSH 236
Query: 116 NNAITAQGMKAFAGLINLVKLDLER 140
++T G+ F L + L++ R
Sbjct: 237 CRSLTDAGLARFKILATSLNLEIVR 261
>gi|270010132|gb|EFA06580.1| hypothetical protein TcasGA2_TC009492 [Tribolium castaneum]
Length = 474
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 161/321 (50%), Gaps = 28/321 (8%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLM-----KL 157
RG+ + LS R++ QG+ NL L+L C + G V + L
Sbjct: 156 RGIKRVQVLSLRKSLRDVIQGIP------NLESLNLRGCYNV--GDVGISHAFVADSPTL 207
Query: 158 ESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGC 214
L++ C +TD+ + ++ L NL+ L++ CS VT+SG+ + GL+KL LNL C
Sbjct: 208 TELDLSLCKQVTDTSLTRIAQHLKNLEVLELGGCSNVTNSGLMLIAWGLKKLKRLNLRSC 267
Query: 215 -PVTAACLDSL-SALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGF-NEITDECLV 270
V + L S SL +L L CQ LSD+ + + + SL +NL F ITD L
Sbjct: 268 WHVGDQGIQHLASGNPSLEHLGLQDCQKLSDEALKHATGLTSLISINLSFCVSITDSGLK 327
Query: 271 HLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNL 326
HL +TNL LNL SC I D G+ L G + L++S ++G L H+S GL NL
Sbjct: 328 HLAKMTNLRELNLRSCDNISDTGMAFLAEGGSRISSLDVSFCDKIGDQALVHISQGLFNL 387
Query: 327 ESINLSFTGISDGSLRKLA-GLSSLKSLNL-DARQITDTGLAALT-SLTGLTHLDLFG-A 382
++ +S +SD L K+A L L++LN+ ++TD GL + SL L +DL+G
Sbjct: 388 RNLLMSACQLSDEGLAKIANSLHDLETLNIGQCSRVTDKGLTTIAESLLRLKCIDLYGCT 447
Query: 383 RITDSGAAYLRNFKNLRSLEI 403
RIT G + L L +
Sbjct: 448 RITTVGLERIMKLPQLSVLNL 468
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 7/199 (3%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
V D+ + +AS SL + L ++D L H ++L S++ +FC+ I+D GL+HL
Sbjct: 270 VGDQGIQHLASGNPSLEHLGLQDCQKLSDEALKHATGLTSLISINLSFCVSITDSGLKHL 329
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRI-HGGLVNL-KGLMKLES 159
++NL L+ R + I+ GM A G + LD+ C +I LV++ +GL L +
Sbjct: 330 AKMTNLRELNLRSCDNISDTGMAFLAEGGSRISSLDVSFCDKIGDQALVHISQGLFNLRN 389
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-V 216
L + C + K + L +L++L I CS+VTD G+ + + L +L ++L GC +
Sbjct: 390 LLMSACQLSDEGLAKIANSLHDLETLNIGQCSRVTDKGLTTIAESLLRLKCIDLYGCTRI 449
Query: 217 TAACLDSLSALGSLFYLNL 235
T L+ + L L LNL
Sbjct: 450 TTVGLERIMKLPQLSVLNL 468
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 91/192 (47%), Gaps = 37/192 (19%)
Query: 272 LKGLTNLESLNLDSC-GIGDEGLVN--------LTGLCNLKCLELSDTQVGSSGLRHLSG 322
++G+ NLESLNL C +GD G+ + LT L C +++DT + R
Sbjct: 174 IQGIPNLESLNLRGCYNVGDVGISHAFVADSPTLTELDLSLCKQVTDTSLT----RIAQH 229
Query: 323 LTNLESINLS-FTGISDGSLRKLA-GLSSLKSLNLDA-RQITDTGLAALTS-LTGLTHLD 378
L NLE + L + +++ L +A GL LK LNL + + D G+ L S L HL
Sbjct: 230 LKNLEVLELGGCSNVTNSGLMLIAWGLKKLKRLNLRSCWHVGDQGIQHLASGNPSLEHLG 289
Query: 379 LFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN-SRITSAGLRHLKP 436
L +++D + GLT L+S+N+S IT +GL+HL
Sbjct: 290 LQDCQKLSDEALKH------------------ATGLTSLISINLSFCVSITDSGLKHLAK 331
Query: 437 LKNLRSLTLESC 448
+ NLR L L SC
Sbjct: 332 MTNLRELNLRSC 343
>gi|320165720|gb|EFW42619.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 664
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 183/449 (40%), Gaps = 44/449 (9%)
Query: 15 VYSRCLTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSG 73
+Y+ +T +S AF + L L L N+ W+ I S +G
Sbjct: 210 LYNNQITSISANAFSGLSKLNTLQL------NNNWLSAIPSSA-------FTGLTALTQL 256
Query: 74 LIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINL 133
L++ + + S F GL L+ L + NN I + AF+GL L
Sbjct: 257 LLYNNQITTVPSSAFT--------GLTALQFL-------YLYNNQIATVAINAFSGLTAL 301
Query: 134 V--KLDLERCTRIHGGLVNLKGLMKLESLNI--KWCNCITDSDMKPLSGLTNLKSLQISC 189
V +LD + T + GL KL +L++ W + I S +GLT L L++
Sbjct: 302 VQLRLDTNQITTVPANA--FSGLSKLNTLHLYNNWLSAIPSSAF---TGLTALTQLRLDT 356
Query: 190 SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS 249
+++T GL L L L +T ++ S L +L L L Q++ +
Sbjct: 357 NQITTVPANAFSGLTALIYLYLYNNQITTVPANAFSGLTALVQLYLYNNQITTIPSSALT 416
Query: 250 KIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSD 309
+ +L L L N+IT GLT L L L + I TGL L L+LS
Sbjct: 417 GLSALTQLYLYNNQITSVPANGFSGLTALTDLRLFNNTITSILANAFTGLTKLTYLDLSL 476
Query: 310 TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALT 369
Q+ S SGLT L + L +S GL++L L L QIT A T
Sbjct: 477 NQLTSIPAGAFSGLTALTQLLLYNNWLSAVPSSAFTGLTALLYLYLYNNQITTVAANAFT 536
Query: 370 SLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSN 423
LT L L L+G +IT A+ +L L + +T GLT L L +SN
Sbjct: 537 GLTALVQLQLYGNQITTISASAFAGMSSLVQLYLYSNRITAIFVNAFTGLTHLSLLELSN 596
Query: 424 SRITSAGLRHLKPLKNLRSLTLESCKVTA 452
++ITS L + L+L + ++A
Sbjct: 597 NQITSLPANAFSGLTAMTQLSLYNNSLSA 625
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 146/346 (42%), Gaps = 16/346 (4%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVN 150
QI+ GL+ L L + NN I + AF+GL LV+L L + T I
Sbjct: 166 QITTVPSSAFTGLTAL-QLLYLYNNQIATVAIDAFSGLTALVQLYLYNNQITSISANA-- 222
Query: 151 LKGLMKLESL--NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTL 208
GL KL +L N W + I S +GLT L L + +++T + GL L
Sbjct: 223 FSGLSKLNTLQLNNNWLSAIPSSAF---TGLTALTQLLLYNNQITTVPSSAFTGLTALQF 279
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
L L + +++ S L +L L L+ Q++ FS + L L+L N ++
Sbjct: 280 LYLYNNQIATVAINAFSGLTALVQLRLDTNQITTVPANAFSGLSKLNTLHLYNNWLSAIP 339
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
GLT L L LD+ I +GL L L L + Q+ + SGLT L
Sbjct: 340 SSAFTGLTALTQLRLDTNQITTVPANAFSGLTALIYLYLYNNQITTVPANAFSGLTALVQ 399
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG 388
+ L I+ L GLS+L L L QIT + LT LT L LF IT
Sbjct: 400 LYLYNNQITTIPSSALTGLSALTQLYLYNNQITSVPANGFSGLTALTDLRLFNNTITSIL 459
Query: 389 AAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITS 428
A L L++ LT +GLT L L + N+ +++
Sbjct: 460 ANAFTGLTKLTYLDLSLNQLTSIPAGAFSGLTALTQLLLYNNWLSA 505
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 148/362 (40%), Gaps = 42/362 (11%)
Query: 117 NAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVNLKGLMKLESLNI--KWCNCITDSD 172
N IT AF+GL L LDL + T + GL KL +L + W + I S
Sbjct: 93 NPITNIASSAFSGLSVLNTLDLTNNQITTVPANA--FSGLSKLNTLYLYNNWLSAIPSSA 150
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
+GLT L L + +++T + GL L LL L + +D+ S L +L
Sbjct: 151 F---TGLTALTQLLLHNNQITTVPSSAFTGLTALQLLYLYNNQIATVAIDAFSGLTALVQ 207
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L L Q++ FS + L L L N ++ GLT L L L + I
Sbjct: 208 LYLYNNQITSISANAFSGLSKLNTLQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITTVP 267
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL-----------SFTGISDGSL 341
TGL L+ L L + Q+ + + SGLT L + L +F+G+S +
Sbjct: 268 SSAFTGLTALQFLYLYNNQIATVAINAFSGLTALVQLRLDTNQITTVPANAFSGLSKLNT 327
Query: 342 RKL-------------AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG 388
L GL++L L LD QIT A + LT L +L L+ +IT
Sbjct: 328 LHLYNNWLSAIPSSAFTGLTALTQLRLDTNQITTVPANAFSGLTALIYLYLYNNQITTVP 387
Query: 389 AAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSA---GLRHLKPLKN 439
A L L + +T GL+ L L + N++ITS G L L +
Sbjct: 388 ANAFSGLTALVQLYLYNNQITTIPSSALTGLSALTQLYLYNNQITSVPANGFSGLTALTD 447
Query: 440 LR 441
LR
Sbjct: 448 LR 449
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 157/383 (40%), Gaps = 39/383 (10%)
Query: 104 GLSNLTSLSFRRNNAITAQGM------------------------KAFAGLINLVKLDL- 138
G+ T++ + +NN IT+ AF+GL L LDL
Sbjct: 56 GIPVTTTILYLQNNQITSISANAFSSLTLLTYLSLSSNPITNIASSAFSGLSVLNTLDLT 115
Query: 139 -ERCTRIHGGLVNLKGLMKLESLNI--KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDS 195
+ T + GL KL +L + W + I S +GLT L L + +++T
Sbjct: 116 NNQITTVPANA--FSGLSKLNTLYLYNNWLSAIPSSAF---TGLTALTQLLLHNNQITTV 170
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 255
+ GL L LL L + +D+ S L +L L L Q++ FS + L
Sbjct: 171 PSSAFTGLTALQLLYLYNNQIATVAIDAFSGLTALVQLYLYNNQITSISANAFSGLSKLN 230
Query: 256 VLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSS 315
L L N ++ GLT L L L + I TGL L+ L L + Q+ +
Sbjct: 231 TLQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITTVPSSAFTGLTALQFLYLYNNQIATV 290
Query: 316 GLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLT 375
+ SGLT L + L I+ +GLS L +L+L ++ +A T LT LT
Sbjct: 291 AINAFSGLTALVQLRLDTNQITTVPANAFSGLSKLNTLHLYNNWLSAIPSSAFTGLTALT 350
Query: 376 HLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSA 429
L L +IT A L L + +T +GLT LV L + N++IT+
Sbjct: 351 QLRLDTNQITTVPANAFSGLTALIYLYLYNNQITTVPANAFSGLTALVQLYLYNNQITTI 410
Query: 430 GLRHLKPLKNLRSLTLESCKVTA 452
L L L L L + ++T+
Sbjct: 411 PSSALTGLSALTQLYLYNNQITS 433
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 139/334 (41%), Gaps = 34/334 (10%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
S + S L + L+ LD N QI+ GL+ L L + NN IT A
Sbjct: 336 SAIPSSAFTGLTALTQLR-LDTN---QITTVPANAFSGLTALIYL-YLYNNQITTVPANA 390
Query: 127 FAGLINLVKLDL--ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
F+GL LV+L L + T I L GL L L + + N IT SGLT L
Sbjct: 391 FSGLTALVQLYLYNNQITTIPSSA--LTGLSALTQLYL-YNNQITSVPANGFSGLTALTD 447
Query: 185 LQISCSKVTDSGIAYLKGLQKLTLLNL---EGCPVTAACLDSLSALGSLFYLN------- 234
L++ + +T GL KLT L+L + + A L+AL L N
Sbjct: 448 LRLFNNTITSILANAFTGLTKLTYLDLSLNQLTSIPAGAFSGLTALTQLLLYNNWLSAVP 507
Query: 235 --------------LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
L Q++ F+ + +L L L N+IT G+++L
Sbjct: 508 SSAFTGLTALLYLYLYNNQITTVAANAFTGLTALVQLQLYGNQITTISASAFAGMSSLVQ 567
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
L L S I + TGL +L LELS+ Q+ S SGLT + ++L +S
Sbjct: 568 LYLYSNRITAIFVNAFTGLTHLSLLELSNNQITSLPANAFSGLTAMTQLSLYNNSLSAVP 627
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 374
GL++L++L L QIT A T LT L
Sbjct: 628 SSAFTGLTALQALLLYNNQITSVAANAFTGLTAL 661
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 145/357 (40%), Gaps = 36/357 (10%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINL--VKLDLERCTRIHGGLVN 150
QI+ GLS L +L NN ++A AF GL L ++LD + T +
Sbjct: 310 QITTVPANAFSGLSKLNTLHLY-NNWLSAIPSSAFTGLTALTQLRLDTNQITTVPANA-- 366
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
GL L L + + N IT SGLT L L + +++T + L GL LT L
Sbjct: 367 FSGLTALIYLYL-YNNQITTVPANAFSGLTALVQLYLYNNQITTIPSSALTGLSALTQLY 425
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
L +T+ + S L +L L L ++ F+ + L L+L N++T
Sbjct: 426 LYNNQITSVPANGFSGLTALTDLRLFNNTITSILANAFTGLTKLTYLDLSLNQLTSIPAG 485
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
GLT L L L + + TGL L L L + Q+ + +GLT L +
Sbjct: 486 AFSGLTALTQLLLYNNWLSAVPSSAFTGLTALLYLYLYNNQITTVAANAFTGLTALVQLQ 545
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITD------TGLA------------------ 366
L I+ S AG+SSL L L + +IT TGL
Sbjct: 546 LYGNQITTISASAFAGMSSLVQLYLYSNRITAIFVNAFTGLTHLSLLELSNNQITSLPAN 605
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA------GLTGLV 417
A + LT +T L L+ ++ ++ L++L + +T GLT LV
Sbjct: 606 AFSGLTAMTQLSLYNNSLSAVPSSAFTGLTALQALLLYNNQITSVAANAFTGLTALV 662
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 114/279 (40%), Gaps = 9/279 (3%)
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
+T+ + GL L L+L +T ++ S L L L L LS F+
Sbjct: 94 PITNIASSAFSGLSVLNTLDLTNNQITTVPANAFSGLSKLNTLYLYNNWLSAIPSSAFTG 153
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
+ +L L L N+IT GLT L+ L L + I + +GL L L L +
Sbjct: 154 LTALTQLLLHNNQITTVPSSAFTGLTALQLLYLYNNQIATVAIDAFSGLTALVQLYLYNN 213
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
Q+ S SGL+ L ++ L+ +S GL++L L L QIT +A T
Sbjct: 214 QITSISANAFSGLSKLNTLQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITTVPSSAFTG 273
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSN- 423
LT L L L+ +I L L + +T +GL+ L +L++ N
Sbjct: 274 LTALQFLYLYNNQIATVAINAFSGLTALVQLRLDTNQITTVPANAFSGLSKLNTLHLYNN 333
Query: 424 --SRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
S I S+ L L LR T + V AN L +
Sbjct: 334 WLSAIPSSAFTGLTALTQLRLDTNQITTVPANAFSGLTA 372
>gi|91085811|ref|XP_974701.1| PREDICTED: similar to partner of paired CG9952-PA [Tribolium
castaneum]
Length = 439
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 162/322 (50%), Gaps = 30/322 (9%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI------HGGLVNLKGLMK 156
RG+ + LS R++ QG+ NL L+L C + H + + L +
Sbjct: 121 RGIKRVQVLSLRKSLRDVIQGIP------NLESLNLRGCYNVGDVGISHAFVADSPTLTE 174
Query: 157 LESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEG 213
L+ + C +TD+ + ++ L NL+ L++ CS VT+SG+ + GL+KL LNL
Sbjct: 175 LD---LSLCKQVTDTSLTRIAQHLKNLEVLELGGCSNVTNSGLMLIAWGLKKLKRLNLRS 231
Query: 214 C-PVTAACLDSL-SALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGF-NEITDECL 269
C V + L S SL +L L CQ LSD+ + + + SL +NL F ITD L
Sbjct: 232 CWHVGDQGIQHLASGNPSLEHLGLQDCQKLSDEALKHATGLTSLISINLSFCVSITDSGL 291
Query: 270 VHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTN 325
HL +TNL LNL SC I D G+ L G + L++S ++G L H+S GL N
Sbjct: 292 KHLAKMTNLRELNLRSCDNISDTGMAFLAEGGSRISSLDVSFCDKIGDQALVHISQGLFN 351
Query: 326 LESINLSFTGISDGSLRKLA-GLSSLKSLNL-DARQITDTGLAALT-SLTGLTHLDLFG- 381
L ++ +S +SD L K+A L L++LN+ ++TD GL + SL L +DL+G
Sbjct: 352 LRNLLMSACQLSDEGLAKIANSLHDLETLNIGQCSRVTDKGLTTIAESLLRLKCIDLYGC 411
Query: 382 ARITDSGAAYLRNFKNLRSLEI 403
RIT G + L L +
Sbjct: 412 TRITTVGLERIMKLPQLSVLNL 433
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 7/199 (3%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
V D+ + +AS SL + L ++D L H ++L S++ +FC+ I+D GL+HL
Sbjct: 235 VGDQGIQHLASGNPSLEHLGLQDCQKLSDEALKHATGLTSLISINLSFCVSITDSGLKHL 294
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRI-HGGLVNL-KGLMKLES 159
++NL L+ R + I+ GM A G + LD+ C +I LV++ +GL L +
Sbjct: 295 AKMTNLRELNLRSCDNISDTGMAFLAEGGSRISSLDVSFCDKIGDQALVHISQGLFNLRN 354
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-V 216
L + C + K + L +L++L I CS+VTD G+ + + L +L ++L GC +
Sbjct: 355 LLMSACQLSDEGLAKIANSLHDLETLNIGQCSRVTDKGLTTIAESLLRLKCIDLYGCTRI 414
Query: 217 TAACLDSLSALGSLFYLNL 235
T L+ + L L LNL
Sbjct: 415 TTVGLERIMKLPQLSVLNL 433
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 91/192 (47%), Gaps = 37/192 (19%)
Query: 272 LKGLTNLESLNLDSC-GIGDEGLVN--------LTGLCNLKCLELSDTQVGSSGLRHLSG 322
++G+ NLESLNL C +GD G+ + LT L C +++DT + R
Sbjct: 139 IQGIPNLESLNLRGCYNVGDVGISHAFVADSPTLTELDLSLCKQVTDTSLT----RIAQH 194
Query: 323 LTNLESINLS-FTGISDGSLRKLA-GLSSLKSLNLDA-RQITDTGLAALTS-LTGLTHLD 378
L NLE + L + +++ L +A GL LK LNL + + D G+ L S L HL
Sbjct: 195 LKNLEVLELGGCSNVTNSGLMLIAWGLKKLKRLNLRSCWHVGDQGIQHLASGNPSLEHLG 254
Query: 379 LFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN-SRITSAGLRHLKP 436
L +++D + GLT L+S+N+S IT +GL+HL
Sbjct: 255 LQDCQKLSDEALKH------------------ATGLTSLISINLSFCVSITDSGLKHLAK 296
Query: 437 LKNLRSLTLESC 448
+ NLR L L SC
Sbjct: 297 MTNLRELNLRSC 308
>gi|290972233|ref|XP_002668860.1| predicted protein [Naegleria gruberi]
gi|284082393|gb|EFC36116.1| predicted protein [Naegleria gruberi]
Length = 296
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 146/298 (48%), Gaps = 8/298 (2%)
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
+ +L +LN++ N I + K +S L N+ +L IS + + G Y+ +++LT L +
Sbjct: 1 MKQLTNLNVRH-NDIDEEGAKYISELMNVSTLDISGNSINKRGAKYIGEMKQLTDLGMYC 59
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
C + +S+L L +L++N + D+G + +I L L++ N+I E + ++
Sbjct: 60 CSIGVEGTKYISSLNQLTHLSININNIGDEGAKYIGQIKQLTDLSICDNKIGSEGVKYIG 119
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
L NL L + IGD G ++ + L L++S + G++++S + +L + +S
Sbjct: 120 QLKNLLKLYVSCNEIGDNGAQFISEMNQLTKLDISSVNITPIGIKYISKMEHLIDLMISD 179
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
I + ++ + L SL + I G L+ + LT+L++ I D G +L
Sbjct: 180 NNIDSMGAKHISQM-KLTSLEVYNNTIDVEGAKYLSEMEQLTNLEISKNEIGDKGVQFLS 238
Query: 394 NFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
K L SL+I ++D G + L+ L+V ++ I+ + L+ +K L L +
Sbjct: 239 GMKQLTSLDINENKISDVGAKYILEMKNLIDLSVFDNEISEDIIERLREMKQLTYLDI 296
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 147/305 (48%), Gaps = 15/305 (4%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG------LMKLE 158
+ LT+L+ R N+ I +G K + L+N+ LD I G +N +G + +L
Sbjct: 1 MKQLTNLNVRHND-IDEEGAKYISELMNVSTLD------ISGNSINKRGAKYIGEMKQLT 53
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
L + +C I K +S L L L I+ + + D G Y+ +++LT L++ + +
Sbjct: 54 DLGM-YCCSIGVEGTKYISSLNQLTHLSININNIGDEGAKYIGQIKQLTDLSICDNKIGS 112
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
+ + L +L L ++ ++ D+G + S++ L L++ IT + ++ + +L
Sbjct: 113 EGVKYIGQLKNLLKLYVSCNEIGDNGAQFISEMNQLTKLDISSVNITPIGIKYISKMEHL 172
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
L + I G +++ + L LE+ + + G ++LS + L ++ +S I D
Sbjct: 173 IDLMISDNNIDSMGAKHISQM-KLTSLEVYNNTIDVEGAKYLSEMEQLTNLEISKNEIGD 231
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 398
++ L+G+ L SL+++ +I+D G + + L L +F I++ LR K L
Sbjct: 232 KGVQFLSGMKQLTSLDINENKISDVGAKYILEMKNLIDLSVFDNEISEDIIERLREMKQL 291
Query: 399 RSLEI 403
L+I
Sbjct: 292 TYLDI 296
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 135/297 (45%), Gaps = 32/297 (10%)
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
++D+SG+ + G ++ + L L +C I G +++ L+ LT LS NN I
Sbjct: 30 TLDISGNSINKRGAKYIGEMKQLTDLGM-YCCSIGVEGTKYISSLNQLTHLSININN-IG 87
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
+G K + L DL C N I +K + L
Sbjct: 88 DEGAKYIGQIKQLT--DLSICD-----------------------NKIGSEGVKYIGQLK 122
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NL L +SC+++ D+G ++ + +LT L++ +T + +S + L L ++ +
Sbjct: 123 NLLKLYVSCNEIGDNGAQFISEMNQLTKLDISSVNITPIGIKYISKMEHLIDLMISDNNI 182
Query: 241 SDDGCEKFS--KIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
G + S K+ SL+V N N I E +L + L +L + IGD+G+ L+G
Sbjct: 183 DSMGAKHISQMKLTSLEVYN---NTIDVEGAKYLSEMEQLTNLEISKNEIGDKGVQFLSG 239
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
+ L L++++ ++ G +++ + NL +++ IS+ + +L + L L++
Sbjct: 240 MKQLTSLDINENKISDVGAKYILEMKNLIDLSVFDNEISEDIIERLREMKQLTYLDI 296
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 126/287 (43%), Gaps = 55/287 (19%)
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
LN+ + ++G + S++ ++ L++ N I ++ + L L + C IG EG
Sbjct: 7 LNVRHNDIDEEGAKYISELMNVSTLDISGNSINKRGAKYIGEMKQLTDLGMYCCSIGVEG 66
Query: 293 LVNLTGLCNLKCLELS------------------------DTQVGSSGLRHLSGLTNLES 328
++ L L L ++ D ++GS G++++ L NL
Sbjct: 67 TKYISSLNQLTHLSININNIGDEGAKYIGQIKQLTDLSICDNKIGSEGVKYIGQLKNLLK 126
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT---------------- 372
+ +S I D + ++ ++ L L++ + IT G+ ++ +
Sbjct: 127 LYVSCNEIGDNGAQFISEMNQLTKLDISSVNITPIGIKYISKMEHLIDLMISDNNIDSMG 186
Query: 373 -------GLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSL 419
LT L+++ I GA YL + L +LEI + D +G+ L SL
Sbjct: 187 AKHISQMKLTSLEVYNNTIDVEGAKYLSEMEQLTNLEISKNEIGDKGVQFLSGMKQLTSL 246
Query: 420 NVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
+++ ++I+ G +++ +KNL L++ +++ + I+RL R++ L
Sbjct: 247 DINENKISDVGAKYILEMKNLIDLSVFDNEISEDIIERL--REMKQL 291
>gi|290999054|ref|XP_002682095.1| predicted protein [Naegleria gruberi]
gi|284095721|gb|EFC49351.1| predicted protein [Naegleria gruberi]
Length = 357
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 142/289 (49%), Gaps = 28/289 (9%)
Query: 168 ITDSD-MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA 226
T+ D +K + L +L L + + + G Y+ L+KL L++ + A +S
Sbjct: 47 FTNEDGLKSIGTLKHLIHLCVDFNGIGLEGANYISQLEKLESLSIRYNYIGAEGAKVISE 106
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD-- 284
+ +L +LN++ ++ +G + S++ L L++G N++ DE ++ L L L +L++D
Sbjct: 107 MKTLTWLNVSSNRIGGEGAKAISQMKQLTYLDIGDNKVGDEEVILLSELDQLTALSIDRI 166
Query: 285 --------------------SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLT 324
+C I DE L+ + L L++ + + G++ LSGL+
Sbjct: 167 NPDGINAISKMNKLVSLSINNCTILDE-CEELSKMKQLTLLDIKSNGISAKGVKQLSGLS 225
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI 384
L +N+S D + ++ + L L ++ QI+D G+ +L L LT LD+ I
Sbjct: 226 QLTHLNISSNAFGDDGAKSISEIKQLTELFVNDCQISDDGMKSLGDLNELTILDISNNYI 285
Query: 385 TDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRH 433
TD G+ YL + L +LE+ L+ G+ ++++N ++T+ +RH
Sbjct: 286 TDEGSLYLTKLEKLTALEVNNNELSYQGVKHMINMN----QLTALSIRH 330
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 150/328 (45%), Gaps = 33/328 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLE---HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINL 133
LK L+ L + C+ + GLE ++ L L SLS R N I A+G K + + L
Sbjct: 53 LKSIGTLKHL-IHLCVDFNGIGLEGANYISQLEKLESLSIRYN-YIGAEGAKVISEMKTL 110
Query: 134 VKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
L++ N I K +S + L L I +KV
Sbjct: 111 TWLNVS-------------------------SNRIGGEGAKAISQMKQLTYLDIGDNKVG 145
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGS 253
D + L L +LT L+++ + ++++S + L L++N C + D+ CE+ SK+
Sbjct: 146 DEEVILLSELDQLTALSID--RINPDGINAISKMNKLVSLSINNCTILDE-CEELSKMKQ 202
Query: 254 LKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVG 313
L +L++ N I+ + + L GL+ L LN+ S GD+G +++ + L L ++D Q+
Sbjct: 203 LTLLDIKSNGISAKGVKQLSGLSQLTHLNISSNAFGDDGAKSISEIKQLTELFVNDCQIS 262
Query: 314 SSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 373
G++ L L L +++S I+D L L L +L ++ +++ G+ + ++
Sbjct: 263 DDGMKSLGDLNELTILDISNNYITDEGSLYLTKLEKLTALEVNNNELSYQGVKHMINMNQ 322
Query: 374 LTHLDLFGARITDSGAAYLRNFKNLRSL 401
LT L + + T FK L+ L
Sbjct: 323 LTALSIRHNQFTFVQNEVFSQFKQLKLL 350
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 114/247 (46%), Gaps = 9/247 (3%)
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 277
A + + +L +L L ++DG + + L L + FN I E ++ L
Sbjct: 26 AKVIQGFVLMKNLTHLTLGSHFTNEDGLKSIGTLKHLIHLCVDFNGIGLEGANYISQLEK 85
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
LESL++ IG EG ++ + L L +S ++G G + +S + L +++ +
Sbjct: 86 LESLSIRYNYIGAEGAKVISEMKTLTWLNVSSNRIGGEGAKAISQMKQLTYLDIGDNKVG 145
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
D + L+ L L +L++D +I G+ A++ + L L + I D L K
Sbjct: 146 DEEVILLSELDQLTALSID--RINPDGINAISKMNKLVSLSINNCTILDE-CEELSKMKQ 202
Query: 398 LRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
L L+I G++ +GL+ L LN+S++ G + + +K L L + C+++
Sbjct: 203 LTLLDIKSNGISAKGVKQLSGLSQLTHLNISSNAFGDDGAKSISEIKQLTELFVNDCQIS 262
Query: 452 ANDIKRL 458
+ +K L
Sbjct: 263 DDGMKSL 269
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 98/209 (46%), Gaps = 5/209 (2%)
Query: 254 LKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVG 313
+K L +N + + + + NL L L S ++GL ++ L +L L + +G
Sbjct: 14 IKFLTFNYNTLGAKVIQGFVLMKNLTHLTLGSHFTNEDGLKSIGTLKHLIHLCVDFNGIG 73
Query: 314 SSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 373
G ++S L LES+++ + I + ++ + +L LN+ + +I G A++ +
Sbjct: 74 LEGANYISQLEKLESLSIRYNYIGAEGAKVISEMKTLTWLNVSSNRIGGEGAKAISQMKQ 133
Query: 374 LTHLDLFGARITDSGAAYLRNFKNLRSLEI----CGGGLTDAGLTGLVSLNVSNSRITSA 429
LT+LD+ ++ D L L +L I G + + LVSL+++N I
Sbjct: 134 LTYLDIGDNKVGDEEVILLSELDQLTALSIDRINPDGINAISKMNKLVSLSINNCTILDE 193
Query: 430 GLRHLKPLKNLRSLTLESCKVTANDIKRL 458
L +K L L ++S ++A +K+L
Sbjct: 194 -CEELSKMKQLTLLDIKSNGISAKGVKQL 221
>gi|326427049|gb|EGD72619.1| hypothetical protein PTSG_04354 [Salpingoeca sp. ATCC 50818]
Length = 1165
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 165/372 (44%), Gaps = 33/372 (8%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLS 61
LP +++++ L S++AFR C +Q L V D ++ V+ +Q +L
Sbjct: 736 LPETLAREVMTAAAEKETLNSKSIKAFRSCGIQHLAFRSSVVVTDAFLRVLGTQFPTLYE 795
Query: 62 VDLSGSDV-TDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA-I 119
+++ + T G+ LK NL SL + +D ++ L L L S N A +
Sbjct: 796 LEIYDCPMLTFRGIAALKGAPNLASLHLSGA--FTDSCVDALMSLHPLEHFSL--NGARV 851
Query: 120 TAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGL 179
++Q F L T H L+SL + C + D + + GL
Sbjct: 852 SSQQFARF----------LSSPTATH-----------LQSLALTSCPALDDGILPSICGL 890
Query: 180 TNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ 239
T+L L +S + V + L L L LNL + + +L+A ++ L L
Sbjct: 891 TDLGHLSLSKTPV--RAVGQLASLPHLYSLNLSYTRASEREVGALAAATNMTTLGLFGLN 948
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNE-ITDECLVHLKGLTNLESLNLDS-CGIGDEGLVNLT 297
LS D ++ GSL L L + D CL H+ LT++ +L+L + +GL +
Sbjct: 949 LSSDAYAPWAGHGSLAELTLSSRDSFDDACLAHVCTLTHVTTLDLSGYYQLTPDGLKAIA 1008
Query: 298 GLCNLKCLELSDTQVGSSGLRHLS--GLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
+ L+ L LS+T + + L H+ GL +L++ ++S T ++D G +++ LNL
Sbjct: 1009 AMQQLQSLSLSNTALTDAALLHIGGVGLPSLDTFDISRTDVTDACAPAFKGFAAVARLNL 1068
Query: 356 DARQITDTGLAA 367
+IT+T A
Sbjct: 1069 SRTRITNTFFHA 1080
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 148/324 (45%), Gaps = 59/324 (18%)
Query: 157 LESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
++ L + +TD+ ++ L + L L+I C +T GIA LKG L L+L G
Sbjct: 767 IQHLAFRSSVVVTDAFLRVLGTQFPTLYELEIYDCPMLTFRGIAALKGAPNLASLHLSGA 826
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG 274
T +C+D+L +L L + +LN ++S ++F++ S
Sbjct: 827 -FTDSCVDALMSLHPLEHFSLNGARVS---SQQFARFLSSPTA----------------- 865
Query: 275 LTNLESLNLDSCGIGDEG-LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
T+L+SL L SC D+G L ++ GL +L L LS T V + G L+ L +L S+NLS+
Sbjct: 866 -THLQSLALTSCPALDDGILPSICGLTDLGHLSLSKTPVRAVG--QLASLPHLYSLNLSY 922
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
T S+ R++ AL + T +T L LFG ++ A
Sbjct: 923 TRASE-------------------REV-----GALAAATNMTTLGLFGLNLSSDAYAPWA 958
Query: 394 NFKNLRSLEICGGGLTDAG-------LTGLVSLNVSN-SRITSAGLRHLKPLKNLRSLTL 445
+L L + D LT + +L++S ++T GL+ + ++ L+SL+L
Sbjct: 959 GHGSLAELTLSSRDSFDDACLAHVCTLTHVTTLDLSGYYQLTPDGLKAIAAMQQLQSLSL 1018
Query: 446 ESCKVTANDIKRLQSRDLPNLVSF 469
+ +T + + LP+L +F
Sbjct: 1019 SNTALTDAALLHIGGVGLPSLDTF 1042
>gi|410907724|ref|XP_003967341.1| PREDICTED: F-box/LRR-repeat protein 14-like [Takifugu rubripes]
Length = 403
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 165/329 (50%), Gaps = 36/329 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFA-----GLINLVKLDLERCTRIHGGLVNLKGLMKL 157
RG+ + LS RR+ + QGM G NL L G ++ + L
Sbjct: 71 RGIKKVQILSLRRSLSYVIQGMPHIESLNLCGCFNLTDSGL--------GHAFVQDIPSL 122
Query: 158 ESLNIKWCNCITDSDM-KPLSGLTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + K L NL+ L++ CS +T++G+ + GL +L LNL C
Sbjct: 123 RVLNLSLCKQITDSSLGKIAEYLKNLEVLELGGCSNITNTGLLLVAWGLHRLKSLNLRSC 182
Query: 215 -PVTAACLDSLSALG--------SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
V+ + LS + SL L L CQ L+D + SK + LKVLNL F
Sbjct: 183 RHVSDVGIGHLSGMTRSAAEGCLSLEKLTLQDCQKLTDLSLKHVSKGLNKLKVLNLSFCG 242
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRH 319
I+D ++HL +T+L SLNL SC I D G+++L G L L++S ++G L +
Sbjct: 243 GISDVGMIHLSHMTHLCSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKIGDQSLAY 302
Query: 320 LS-GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALT-SLTGLT 375
++ GL L+S++L ISD + R + + LK+LN+ +ITD GL + LT LT
Sbjct: 303 IAQGLYQLKSLSLCSCHISDDGINRMVRQMHELKTLNIGQCGRITDKGLELIADHLTQLT 362
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEI 403
+DL+G +IT G + L+ L +
Sbjct: 363 GIDLYGCTKITKRGLERITQLPCLKVLNL 391
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 163/306 (53%), Gaps = 26/306 (8%)
Query: 82 NLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLI-NLVKLDL 138
+++SL+ C ++D GL H ++ + +L L+ IT + A + NL L+L
Sbjct: 94 HIESLNLCGCFNLTDSGLGHAFVQDIPSLRVLNLSLCKQITDSSLGKIAEYLKNLEVLEL 153
Query: 139 ERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT--------NLKSLQIS 188
C+ I G L+ GL +L+SLN++ C ++D + LSG+T +L+ L +
Sbjct: 154 GGCSNITNTGLLLVAWGLHRLKSLNLRSCRHVSDVGIGHLSGMTRSAAEGCLSLEKLTLQ 213
Query: 189 -CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDG 244
C K+TD + ++ KGL KL +LNL C ++ + LS + L LNL C +SD G
Sbjct: 214 DCQKLTDLSLKHVSKGLNKLKVLNLSFCGGISDVGMIHLSHMTHLCSLNLRSCDNISDTG 273
Query: 245 CEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGLVNLT-GL 299
+ +GSL++ L++ F ++I D+ L ++ +GL L+SL+L SC I D+G+ + +
Sbjct: 274 IMHLA-MGSLRLSGLDVSFCDKIGDQSLAYIAQGLYQLKSLSLCSCHISDDGINRMVRQM 332
Query: 300 CNLKCLELSDT-QVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNLD 356
LK L + ++ GL ++ LT L I+L T I+ L ++ L LK LNL
Sbjct: 333 HELKTLNIGQCGRITDKGLELIADHLTQLTGIDLYGCTKITKRGLERITQLPCLKVLNLG 392
Query: 357 ARQITD 362
Q+T+
Sbjct: 393 LWQMTE 398
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ K + L+ L+ +FC ISD G+ HL +++L SL+ R + I+ G+
Sbjct: 218 LTDLSLKHVSKGLNKLKVLNLSFCGGISDVGMIHLSHMTHLCSLNLRSCDNISDTGIMHL 277
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C +I + +GL +L+SL++ C+ D + + + LK+
Sbjct: 278 AMGSLRLSGLDVSFCDKIGDQSLAYIAQGLYQLKSLSLCSCHISDDGINRMVRQMHELKT 337
Query: 185 LQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + L +LT ++L GC +++
Sbjct: 338 LNIGQCGRITDKGLELIADHLTQLTGIDLYGCT-----------------------KITK 374
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++T+
Sbjct: 375 RGLERITQLPCLKVLNLGLWQMTE 398
>gi|432862145|ref|XP_004069745.1| PREDICTED: F-box/LRR-repeat protein 14-like [Oryzias latipes]
Length = 403
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 169/337 (50%), Gaps = 36/337 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFA-----GLINLVKLDLERCTRIHGGLVNLKGLMKL 157
RG+ + LS RR+ + QGM G NL L G ++ + L
Sbjct: 71 RGIKKVQILSLRRSLSYVIQGMPHIESLNLCGCFNLTDNGL--------GHAFVQDIPSL 122
Query: 158 ESLNIKWCNCITDSDMKPLSG-LTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ L NL++L + CS +T++G+ + GL KL LNL C
Sbjct: 123 RLLNLSLCKQITDSSLGRIAQYLKNLEALDLGGCSNITNTGLLLIAWGLHKLKSLNLRSC 182
Query: 215 -PVTAACLDSLSALG--------SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
V+ + +S + SL L L CQ L+D + SK + LKVLNL F
Sbjct: 183 RHVSDVGIGHISGMTRSAAEGCLSLEKLTLQDCQKLTDLSLKHVSKGLNKLKVLNLSFCG 242
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRH 319
I+D ++HL + +L SLNL SC I D G+++L G L L++S ++G L +
Sbjct: 243 GISDAGMIHLSHMAHLCSLNLRSCDNISDTGIMHLAMGSLQLSGLDVSFCDKIGDQSLAY 302
Query: 320 LS-GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALT-SLTGLT 375
++ GL L+S++L ISD + R + + LK+LN+ +ITD GL + LT LT
Sbjct: 303 VAQGLYQLKSLSLCSCHISDDGINRMVRQMHELKTLNIGQCVRITDKGLELIADHLTQLT 362
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
+DL+G +IT G + L+ L + +TD+
Sbjct: 363 GIDLYGCTKITKRGLERITQLPCLKVLNLGLWQMTDS 399
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 165/307 (53%), Gaps = 26/307 (8%)
Query: 82 NLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAG-LINLVKLDL 138
+++SL+ C ++D GL H ++ + +L L+ IT + A L NL LDL
Sbjct: 94 HIESLNLCGCFNLTDNGLGHAFVQDIPSLRLLNLSLCKQITDSSLGRIAQYLKNLEALDL 153
Query: 139 ERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT--------NLKSLQIS 188
C+ I G L+ GL KL+SLN++ C ++D + +SG+T +L+ L +
Sbjct: 154 GGCSNITNTGLLLIAWGLHKLKSLNLRSCRHVSDVGIGHISGMTRSAAEGCLSLEKLTLQ 213
Query: 189 -CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDG 244
C K+TD + ++ KGL KL +LNL C ++ A + LS + L LNL C +SD G
Sbjct: 214 DCQKLTDLSLKHVSKGLNKLKVLNLSFCGGISDAGMIHLSHMAHLCSLNLRSCDNISDTG 273
Query: 245 CEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGLVNLT-GL 299
+ +GSL++ L++ F ++I D+ L ++ +GL L+SL+L SC I D+G+ + +
Sbjct: 274 IMHLA-MGSLQLSGLDVSFCDKIGDQSLAYVAQGLYQLKSLSLCSCHISDDGINRMVRQM 332
Query: 300 CNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNLD 356
LK L + ++ GL ++ LT L I+L T I+ L ++ L LK LNL
Sbjct: 333 HELKTLNIGQCVRITDKGLELIADHLTQLTGIDLYGCTKITKRGLERITQLPCLKVLNLG 392
Query: 357 ARQITDT 363
Q+TD+
Sbjct: 393 LWQMTDS 399
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ K + L+ L+ +FC ISD G+ HL +++L SL+ R + I+ G+
Sbjct: 218 LTDLSLKHVSKGLNKLKVLNLSFCGGISDAGMIHLSHMAHLCSLNLRSCDNISDTGIMHL 277
Query: 128 A-GLINLVKLDLERCTRI--HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C +I +GL +L+SL++ C+ D + + + LK+
Sbjct: 278 AMGSLQLSGLDVSFCDKIGDQSLAYVAQGLYQLKSLSLCSCHISDDGINRMVRQMHELKT 337
Query: 185 LQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + L +LT ++L GC +++
Sbjct: 338 LNIGQCVRITDKGLELIADHLTQLTGIDLYGCT-----------------------KITK 374
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 375 RGLERITQLPCLKVLNLGLWQMTD 398
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 39/197 (19%)
Query: 272 LKGLTNLESLNLDSC------GIGDEGLVNLTGL--CNLK-CLELSDTQVGSSGLRHLSG 322
++G+ ++ESLNL C G+G + ++ L NL C +++D+ +G R
Sbjct: 89 IQGMPHIESLNLCGCFNLTDNGLGHAFVQDIPSLRLLNLSLCKQITDSSLG----RIAQY 144
Query: 323 LTNLESINLS-FTGISDGSLRKLA-GLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL 379
L NLE+++L + I++ L +A GL LKSLNL + R ++D G+ ++ +T
Sbjct: 145 LKNLEALDLGGCSNITNTGLLLIAWGLHKLKSLNLRSCRHVSDVGIGHISGMT------- 197
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTD-------AGLTGLVSLNVSN-SRITSAGL 431
R G L +L+ C LTD GL L LN+S I+ AG+
Sbjct: 198 ---RSAAEGCLSLEKL----TLQDCQK-LTDLSLKHVSKGLNKLKVLNLSFCGGISDAGM 249
Query: 432 RHLKPLKNLRSLTLESC 448
HL + +L SL L SC
Sbjct: 250 IHLSHMAHLCSLNLRSC 266
>gi|17548893|ref|NP_522233.1| GALA protein [Ralstonia solanacearum GMI1000]
Length = 981
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 183/408 (44%), Gaps = 14/408 (3%)
Query: 58 SLLSVDLSG---SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
S+ +DLSG S V+++GL +L L SLD + I + G + L ++LTSL+
Sbjct: 578 SVRHLDLSGCTGSAVSEAGLAYLARLP-LASLDLSDT-GIGNRGAQALAASASLTSLNLS 635
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N I G +A L LD+ + G L G L SL ++ I D ++
Sbjct: 636 -GNGIGTAGAEALGRNTVLTALDISANPIRNAGAQALAGSRSLTSLELR-DTGIEDGGIE 693
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L+ T L+SL IS + ++D A L + LT L GC +T L+ + SL L
Sbjct: 694 ALAANTVLRSLDISGNDLSDQSAAALAANRTLTSLKANGCGLTNDMAQQLARIRSLRTLE 753
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
+ + D G ++ SL+ LNL N IT + L L L+SL++ G GD G +
Sbjct: 754 VGSNSIGDAGVLTIARNASLRSLNLSRNPITPQGLYPLALSRTLKSLDVSRIGCGDRGAL 813
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
L+G L L+L +V S G R L+ L S++L I + R LA L SLN
Sbjct: 814 LLSGNRALTSLKLGFNRVSSEGARRLAANRTLVSLDLRGNTIDVAAARALANAEPLASLN 873
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT 414
+ ++ D AL LT LD+ R++ A L N L SL I + G
Sbjct: 874 VSDCRLDDAVACALAESRTLTSLDVSWNRLSHRAARALANNPVLASLYISHNDIGPEGAQ 933
Query: 415 GLVS------LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIK 456
L L+ +RI AG R L+ +R T ++ A D+
Sbjct: 934 ALADSASLTFLDARANRIGEAGARLLEANTRMRG-TPQNPHFLAQDVP 980
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 104/210 (49%), Gaps = 8/210 (3%)
Query: 264 ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL 323
+++ L +L L L SL+L GIG+ G L +L L LS +G++G L
Sbjct: 592 VSEAGLAYLARLP-LASLDLSDTGIGNRGAQALAASASLTSLNLSGNGIGTAGAEALGRN 650
Query: 324 TNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGAR 383
T L ++++S I + + LAG SL SL L I D G+ AL + T L LD+ G
Sbjct: 651 TVLTALDISANPIRNAGAQALAGSRSLTSLELRDTGIEDGGIEALAANTVLRSLDISGND 710
Query: 384 ITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPL 437
++D AA L + L SL+ G GLT+ A + L +L V ++ I AG+ +
Sbjct: 711 LSDQSAAALAANRTLTSLKANGCGLTNDMAQQLARIRSLRTLEVGSNSIGDAGVLTIARN 770
Query: 438 KNLRSLTLESCKVTANDIKRLQ-SRDLPNL 466
+LRSL L +T + L SR L +L
Sbjct: 771 ASLRSLNLSRNPITPQGLYPLALSRTLKSL 800
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 157/356 (44%), Gaps = 29/356 (8%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
LR L SLSF + ++ ++A + LDL CT G V+ GL L
Sbjct: 549 FSRLRNYPALESLSF--HGPLSLADLRALPPSVR--HLDLSGCT---GSAVSEAGLAYLA 601
Query: 159 SLNIKWCNC----ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC 214
L + + I + + L+ +L SL +S + + +G L LT L++
Sbjct: 602 RLPLASLDLSDTGIGNRGAQALAASASLTSLNLSGNGIGTAGAEALGRNTVLTALDISAN 661
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG 274
P+ A +L+ SL L L + D G E + L+ L++ N+++D+ L
Sbjct: 662 PIRNAGAQALAGSRSLTSLELRDTGIEDGGIEALAANTVLRSLDISGNDLSDQSAAALAA 721
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
L SL + CG+ ++ L + +L+ LE+ +G +G+ ++ +L S+NLS
Sbjct: 722 NRTLTSLKANGCGLTNDMAQQLARIRSLRTLEVGSNSIGDAGVLTIARNASLRSLNLSRN 781
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
I+ L LA +LKSL++ D G L+ LT L L R++ GA L
Sbjct: 782 PITPQGLYPLALSRTLKSLDVSRIGCGDRGALLLSGNRALTSLKLGFNRVSSEGARRLAA 841
Query: 395 FKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
+ L SL++ G +++V+ +R + +PL SL + C++
Sbjct: 842 NRTLVSLDLRGN-----------TIDVAAARALAN----AEPLA---SLNVSDCRL 879
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 121/300 (40%), Gaps = 71/300 (23%)
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
D + LSGL + L+ +LKG TL +L+ P T L
Sbjct: 40 DRRALSGLRDHPHLES----------VHLKG--DFTLADLKALPTT------------LR 75
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
+L+L+ C GS K + +L GL LESLN+ IGD
Sbjct: 76 HLDLSEC------------TGSAKSF---------RAIAYLAGLP-LESLNVAGAEIGDG 113
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
G L +LK L + + +SG R L+ LES++L+ I D + LAG SL+
Sbjct: 114 GARLLAANPSLKSLNAASGGISASGARMLAESPTLESLDLTQNAIGDAGAQALAGSRSLR 173
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDL------------------FGARITDSGAAYLR 393
L + +TD G AL L LDL IT GA L
Sbjct: 174 HLAVRNGLVTDLGTRALALNPALVSLDLGNLVTETGNQVEQDGYDKTANNITAQGAWALA 233
Query: 394 NFKNLRSLEICGGGL-TDAGLTGLV------SLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
++L+SL + G L D G+ L SLNV+ + +TSA + L L SL++
Sbjct: 234 QNRSLKSLSVQGNDLCGDDGVRALARNRTLTSLNVAFTNMTSASAKALADNPVLTSLSVR 293
>gi|442624469|ref|NP_001261138.1| partner of paired, isoform B [Drosophila melanogaster]
gi|440214583|gb|AGB93669.1| partner of paired, isoform B [Drosophila melanogaster]
Length = 562
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 188/374 (50%), Gaps = 68/374 (18%)
Query: 7 SQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG 66
S +FN LV R + +V + + R +L+DL LG +L S++LSG
Sbjct: 202 SPSLFNCLV-KRGIKKVQILSLRR-SLKDLVLGV----------------PALTSLNLSG 243
Query: 67 S-DVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGL----EHLRGLSNLTSLSFRRNNAI 119
+V D L H D NL++LD + C QI+D L +HLR NL +L I
Sbjct: 244 CFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGRIAQHLR---NLETLELGGCCNI 300
Query: 120 TAQGMKAFA-GLINLVKLDLERCTRIH-GGLVNLKGL--------MKLESLNIKWCNCIT 169
T G+ A GL L L+L C I G+ +L G ++LE L ++ C ++
Sbjct: 301 TNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLS 360
Query: 170 DSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
D + ++ GLT+LKS+ +S C VTDSG+ +L + KL LNL C D++S +
Sbjct: 361 DEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC-------DNISDI 413
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDS 285
G + L++ G S I SL V F ++I+D+ L H+ +GL L SL+L+
Sbjct: 414 GMAY--------LTEGG----SGINSLDV---SFCDKISDQALTHIAQGLYRLRSLSLNQ 458
Query: 286 CGIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSL 341
C I D G++ + L L+ L + +++ GL+ L+ LTNL++I+L T +S +
Sbjct: 459 CQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGI 518
Query: 342 RKLAGLSSLKSLNL 355
+ L L+ LNL
Sbjct: 519 DIIMKLPKLQKLNL 532
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 164/329 (49%), Gaps = 36/329 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAF-----AGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
RG+ + LS RR+ G+ A +G N+ ++L + L L
Sbjct: 212 RGIKKVQILSLRRSLKDLVLGVPALTSLNLSGCFNVADMNLGHAFSV--------DLPNL 263
Query: 158 ESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGC 214
++L++ C ITD+ + ++ L NL++L++ C +T++G+ + GL+KL LNL C
Sbjct: 264 KTLDLSLCKQITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSC 323
Query: 215 PVTA-------ACLDSLSALGSL--FYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A +A G+L YL L CQ LSD+ ++ + SLK +NL F
Sbjct: 324 WHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCV 383
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRH 319
+TD L HL + LE LNL SC I D G+ LT G + L++S ++ L H
Sbjct: 384 SVTDSGLKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTH 443
Query: 320 LS-GLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNL-DARQITDTGLAALTS-LTGLT 375
++ GL L S++L+ I+D + K+A L L++LN+ +ITD GL L LT L
Sbjct: 444 IAQGLYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLK 503
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEI 403
+DL+G +++ G + L+ L +
Sbjct: 504 TIDLYGCTQLSSKGIDIIMKLPKLQKLNL 532
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 57/276 (20%)
Query: 202 GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF 261
G+ LT LNL GC A ++ LG F ++L +LK L+L
Sbjct: 232 GVPALTSLNLSGC-FNVADMN----LGHAFSVDL----------------PNLKTLDLSL 270
Query: 262 -NEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLEL-SDTQVGSSG 316
+ITD L + + L NLE+L L C I + GL+ + GL LK L L S + G
Sbjct: 271 CKQITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQG 330
Query: 317 LRHLSGLTNLES---INLSFTGI------SDGSLRKLA-GLSSLKSLNLD-ARQITDTGL 365
+ HL+G + + + L + G+ SD +L +A GL+SLKS+NL +TD+GL
Sbjct: 331 IGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGL 390
Query: 366 AALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN- 423
L + L L+L I+D G AYL T+ G +G+ SL+VS
Sbjct: 391 KHLARMPKLEQLNLRSCDNISDIGMAYL----------------TEGG-SGINSLDVSFC 433
Query: 424 SRITSAGLRHL-KPLKNLRSLTLESCKVTANDIKRL 458
+I+ L H+ + L LRSL+L C++T + + ++
Sbjct: 434 DKISDQALTHIAQGLYRLRSLSLNQCQITDHGMLKI 469
>gi|17647819|ref|NP_523812.1| partner of paired, isoform A [Drosophila melanogaster]
gi|194884489|ref|XP_001976275.1| GG20101 [Drosophila erecta]
gi|10441427|gb|AAG17034.1|AF187980_1 Partner of Paired [Drosophila melanogaster]
gi|7291460|gb|AAF46886.1| partner of paired, isoform A [Drosophila melanogaster]
gi|21430560|gb|AAM50958.1| RE01138p [Drosophila melanogaster]
gi|190659462|gb|EDV56675.1| GG20101 [Drosophila erecta]
gi|220947678|gb|ACL86382.1| CG9952-PA [synthetic construct]
gi|220957060|gb|ACL91073.1| ppa-PA [synthetic construct]
Length = 538
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 188/374 (50%), Gaps = 68/374 (18%)
Query: 7 SQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG 66
S +FN LV R + +V + + R +L+DL LG +L S++LSG
Sbjct: 202 SPSLFNCLV-KRGIKKVQILSLRR-SLKDLVLGV----------------PALTSLNLSG 243
Query: 67 S-DVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGL----EHLRGLSNLTSLSFRRNNAI 119
+V D L H D NL++LD + C QI+D L +HLR NL +L I
Sbjct: 244 CFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGRIAQHLR---NLETLELGGCCNI 300
Query: 120 TAQGMKAFA-GLINLVKLDLERCTRIH-GGLVNLKGL--------MKLESLNIKWCNCIT 169
T G+ A GL L L+L C I G+ +L G ++LE L ++ C ++
Sbjct: 301 TNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLS 360
Query: 170 DSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
D + ++ GLT+LKS+ +S C VTDSG+ +L + KL LNL C D++S +
Sbjct: 361 DEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC-------DNISDI 413
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDS 285
G + L++ G S I SL V F ++I+D+ L H+ +GL L SL+L+
Sbjct: 414 GMAY--------LTEGG----SGINSLDV---SFCDKISDQALTHIAQGLYRLRSLSLNQ 458
Query: 286 CGIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSL 341
C I D G++ + L L+ L + +++ GL+ L+ LTNL++I+L T +S +
Sbjct: 459 CQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGI 518
Query: 342 RKLAGLSSLKSLNL 355
+ L L+ LNL
Sbjct: 519 DIIMKLPKLQKLNL 532
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 164/329 (49%), Gaps = 36/329 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAF-----AGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
RG+ + LS RR+ G+ A +G N+ ++L + L L
Sbjct: 212 RGIKKVQILSLRRSLKDLVLGVPALTSLNLSGCFNVADMNLGHAFSV--------DLPNL 263
Query: 158 ESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGC 214
++L++ C ITD+ + ++ L NL++L++ C +T++G+ + GL+KL LNL C
Sbjct: 264 KTLDLSLCKQITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSC 323
Query: 215 PVTA-------ACLDSLSALGSLF--YLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A +A G+L YL L CQ LSD+ ++ + SLK +NL F
Sbjct: 324 WHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCV 383
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRH 319
+TD L HL + LE LNL SC I D G+ LT G + L++S ++ L H
Sbjct: 384 SVTDSGLKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTH 443
Query: 320 LS-GLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNL-DARQITDTGLAALTS-LTGLT 375
++ GL L S++L+ I+D + K+A L L++LN+ +ITD GL L LT L
Sbjct: 444 IAQGLYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLK 503
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEI 403
+DL+G +++ G + L+ L +
Sbjct: 504 TIDLYGCTQLSSKGIDIIMKLPKLQKLNL 532
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 57/276 (20%)
Query: 202 GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF 261
G+ LT LNL GC A ++ LG F ++L +LK L+L
Sbjct: 232 GVPALTSLNLSGC-FNVADMN----LGHAFSVDL----------------PNLKTLDLSL 270
Query: 262 -NEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLEL-SDTQVGSSG 316
+ITD L + + L NLE+L L C I + GL+ + GL LK L L S + G
Sbjct: 271 CKQITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQG 330
Query: 317 LRHLSGLTNLES---INLSFTGI------SDGSLRKLA-GLSSLKSLNLD-ARQITDTGL 365
+ HL+G + + + L + G+ SD +L +A GL+SLKS+NL +TD+GL
Sbjct: 331 IGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGL 390
Query: 366 AALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN- 423
L + L L+L I+D G AYL T+ G +G+ SL+VS
Sbjct: 391 KHLARMPKLEQLNLRSCDNISDIGMAYL----------------TEGG-SGINSLDVSFC 433
Query: 424 SRITSAGLRHL-KPLKNLRSLTLESCKVTANDIKRL 458
+I+ L H+ + L LRSL+L C++T + + ++
Sbjct: 434 DKISDQALTHIAQGLYRLRSLSLNQCQITDHGMLKI 469
>gi|195346821|ref|XP_002039953.1| GM15616 [Drosophila sechellia]
gi|194135302|gb|EDW56818.1| GM15616 [Drosophila sechellia]
Length = 538
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 188/374 (50%), Gaps = 68/374 (18%)
Query: 7 SQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG 66
S +FN LV R + +V + + R +L+DL LG +L S++LSG
Sbjct: 202 SPSLFNCLV-KRGIKKVQILSLRR-SLKDLVLGV----------------PALTSLNLSG 243
Query: 67 S-DVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGL----EHLRGLSNLTSLSFRRNNAI 119
+V D L H D NL++LD + C QI+D L +HLR NL +L I
Sbjct: 244 CFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGRIAQHLR---NLETLELGGCCNI 300
Query: 120 TAQGMKAFA-GLINLVKLDLERCTRIH-GGLVNLKGL--------MKLESLNIKWCNCIT 169
T G+ A GL L L+L C I G+ +L G ++LE L ++ C ++
Sbjct: 301 TNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLS 360
Query: 170 DSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
D + ++ GLT+LKS+ +S C VTDSG+ +L + KL LNL C D++S +
Sbjct: 361 DEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC-------DNISDI 413
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDS 285
G + L++ G S I SL V F ++I+D+ L H+ +GL L SL+L+
Sbjct: 414 GMAY--------LTEGG----SGINSLDV---SFCDKISDQALTHIAQGLYRLRSLSLNQ 458
Query: 286 CGIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSL 341
C I D G++ + L L+ L + +++ GL+ L+ LTNL++I+L T +S +
Sbjct: 459 CQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGI 518
Query: 342 RKLAGLSSLKSLNL 355
+ L L+ LNL
Sbjct: 519 DIIMKLPKLQKLNL 532
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 164/329 (49%), Gaps = 36/329 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAF-----AGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
RG+ + LS RR+ G+ A +G N+ ++L + L L
Sbjct: 212 RGIKKVQILSLRRSLKDLVLGVPALTSLNLSGCFNVADMNLGHAFSV--------DLPNL 263
Query: 158 ESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGC 214
++L++ C ITD+ + ++ L NL++L++ C +T++G+ + GL+KL LNL C
Sbjct: 264 KTLDLSLCKQITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSC 323
Query: 215 PVTA-------ACLDSLSALGSL--FYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A +A G+L YL L CQ LSD+ ++ + SLK +NL F
Sbjct: 324 WHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCV 383
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRH 319
+TD L HL + LE LNL SC I D G+ LT G + L++S ++ L H
Sbjct: 384 SVTDSGLKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTH 443
Query: 320 LS-GLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNL-DARQITDTGLAALTS-LTGLT 375
++ GL L S++L+ I+D + K+A L L++LN+ +ITD GL L LT L
Sbjct: 444 IAQGLYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLK 503
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEI 403
+DL+G +++ G + L+ L +
Sbjct: 504 TIDLYGCTQLSSKGIDIIMKLPKLQKLNL 532
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 57/276 (20%)
Query: 202 GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF 261
G+ LT LNL GC A ++ LG F ++L +LK L+L
Sbjct: 232 GVPALTSLNLSGC-FNVADMN----LGHAFSVDL----------------PNLKTLDLSL 270
Query: 262 -NEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLEL-SDTQVGSSG 316
+ITD L + + L NLE+L L C I + GL+ + GL LK L L S + G
Sbjct: 271 CKQITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQG 330
Query: 317 LRHLSGLTNLES---INLSFTGI------SDGSLRKLA-GLSSLKSLNLD-ARQITDTGL 365
+ HL+G + + + L + G+ SD +L +A GL+SLKS+NL +TD+GL
Sbjct: 331 IGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGL 390
Query: 366 AALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN- 423
L + L L+L I+D G AYL T+ G +G+ SL+VS
Sbjct: 391 KHLARMPKLEQLNLRSCDNISDIGMAYL----------------TEGG-SGINSLDVSFC 433
Query: 424 SRITSAGLRHL-KPLKNLRSLTLESCKVTANDIKRL 458
+I+ L H+ + L LRSL+L C++T + + ++
Sbjct: 434 DKISDQALTHIAQGLYRLRSLSLNQCQITDHGMLKI 469
>gi|290982059|ref|XP_002673748.1| predicted protein [Naegleria gruberi]
gi|284087334|gb|EFC41004.1| predicted protein [Naegleria gruberi]
Length = 370
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 151/341 (44%), Gaps = 9/341 (2%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
L+ L + L L+ NN I G+K L L L++ C I L +L L L
Sbjct: 24 LQVLDSMKELKKLNLEYNN-IDPNGIKYLGSLKQLTDLNV-SCCYIGLNLSHLILLKALT 81
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
LNI N I K + + L L I + + G Y+ GL++LT LN+ +
Sbjct: 82 HLNI-TSNNIRAEGAKYIGEMKQLTKLSIGSNDIGPEGAKYISGLEQLTYLNIRSNDIKK 140
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
+S + L YLN+ + D G S++ L L++G+N+I +E ++ L N+
Sbjct: 141 DGAKHISEMKQLTYLNVVGNHICDGGARFISEMKQLSNLSVGYNDIGEEGAKYISELMNV 200
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
L++ I ++G + + L L + +G G +++S L L +++S I D
Sbjct: 201 SILDIGGNSINEKGAKFIGEMKQLTDLRIYCCNIGVEGTQYISSLNQLTHLSISTNNIGD 260
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 398
+ + + L L++ +I G ++ L L +L + G I D+GA ++ L
Sbjct: 261 EGAKYIGQMKQLTDLSIRENKIGIEGAKSIGQLKNLLNLYISGNEIGDNGAQFISEMNQL 320
Query: 399 RSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRH 433
L+I +T G + L L + ++ I S G ++
Sbjct: 321 TILDISSINITPIGIKYISNMEYLTDLRIIDNNIDSMGAKY 361
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 144/321 (44%), Gaps = 31/321 (9%)
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
+++ L + LK L + + + +GI YL L++LT LN+ C + L L L +L
Sbjct: 23 NLQVLDSMKELKKLNLEYNNIDPNGIKYLGSLKQLTDLNVSCCYI-GLNLSHLILLKALT 81
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
+LN+ + +G + ++ L L++G N+I E ++ GL L LN+ S I +
Sbjct: 82 HLNITSNNIRAEGAKYIGEMKQLTKLSIGSNDIGPEGAKYISGLEQLTYLNIRSNDIKKD 141
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
G +++ + L L + + G R +S + L ++++ + I + + ++ L ++
Sbjct: 142 GAKHISEMKQLTYLNVVGNHICDGGARFISEMKQLSNLSVGYNDIGEEGAKYISELMNVS 201
Query: 352 SLNL--------------DARQITD----------TGLAALTSLTGLTHLDLFGARITDS 387
L++ + +Q+TD G ++SL LTHL + I D
Sbjct: 202 ILDIGGNSINEKGAKFIGEMKQLTDLRIYCCNIGVEGTQYISSLNQLTHLSISTNNIGDE 261
Query: 388 GAAYLRNFKNLRSLEI------CGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLR 441
GA Y+ K L L I G + L L++L +S + I G + + + L
Sbjct: 262 GAKYIGQMKQLTDLSIRENKIGIEGAKSIGQLKNLLNLYISGNEIGDNGAQFISEMNQLT 321
Query: 442 SLTLESCKVTANDIKRLQSRD 462
L + S +T IK + + +
Sbjct: 322 ILDISSINITPIGIKYISNME 342
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 8/295 (2%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
L N+ +L + + + L +++L LNLE + + L +L L LN++ C
Sbjct: 6 LENIANLAVRMNGEIGFNLQVLDSMKELKKLNLEYNNIDPNGIKYLGSLKQLTDLNVSCC 65
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
+ + + +L LN+ N I E ++ + L L++ S IG EG ++G
Sbjct: 66 YIGLN-LSHLILLKALTHLNITSNNIRAEGAKYIGEMKQLTKLSIGSNDIGPEGAKYISG 124
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L L L + + G +H+S + L +N+ I DG R ++ + L +L++
Sbjct: 125 LEQLTYLNIRSNDIKKDGAKHISEMKQLTYLNVVGNHICDGGARFISEMKQLSNLSVGYN 184
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI--CGGGLTD----AG 412
I + G ++ L ++ LD+ G I + GA ++ K L L I C G+ +
Sbjct: 185 DIGEEGAKYISELMNVSILDIGGNSINEKGAKFIGEMKQLTDLRIYCCNIGVEGTQYISS 244
Query: 413 LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL-QSRDLPNL 466
L L L++S + I G +++ +K L L++ K+ K + Q ++L NL
Sbjct: 245 LNQLTHLSISTNNIGDEGAKYIGQMKQLTDLSIRENKIGIEGAKSIGQLKNLLNL 299
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 19/174 (10%)
Query: 43 GVNDKWMDVIASQGSSLLS-------VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQIS 95
G ND I +G+ +S +D+ G+ + + G + + L L +C I
Sbjct: 182 GYND-----IGEEGAKYISELMNVSILDIGGNSINEKGAKFIGEMKQLTDLRI-YCCNIG 235
Query: 96 DGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLM 155
G +++ L+ LT LS NN I +G K + L L + R +I G+ K +
Sbjct: 236 VEGTQYISSLNQLTHLSISTNN-IGDEGAKYIGQMKQLTDLSI-RENKI--GIEGAKSIG 291
Query: 156 KLES-LNIKWC-NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
+L++ LN+ N I D+ + +S + L L IS +T GI Y+ ++ LT
Sbjct: 292 QLKNLLNLYISGNEIGDNGAQFISEMNQLTILDISSINITPIGIKYISNMEYLT 345
>gi|348505743|ref|XP_003440420.1| PREDICTED: F-box/LRR-repeat protein 14-like [Oreochromis niloticus]
Length = 403
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 166/329 (50%), Gaps = 36/329 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFA-----GLINLVKLDLERCTRIHGGLVNLKGLMKL 157
RG+ + LS RR+ + QGM G NL L G ++ + L
Sbjct: 71 RGIKKVQILSLRRSLSYVIQGMPHIESLNLCGCFNLTDNGL--------GHAFVQDISSL 122
Query: 158 ESLNIKWCNCITDSDMKPLSG-LTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ L NL+ L++ CS +T++G+ + GL +L LNL C
Sbjct: 123 RVLNLSLCKQITDSSLGRIAQYLKNLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSC 182
Query: 215 -PVTAACLDSLSALG--------SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
V+ + LS + +L L L CQ L+D + SK + LKVLNL F
Sbjct: 183 RHVSDVGIGHLSGMTRSAAEGCLTLEKLTLQDCQKLTDLSLKHISKGLNKLKVLNLSFCG 242
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRH 319
I+D ++HL +T+L SLNL SC I D G+++L G L L++S ++G L +
Sbjct: 243 GISDAGMIHLSHMTHLCSLNLRSCDNISDTGIMHLAMGSLRLTGLDVSFCDKIGDQSLAY 302
Query: 320 LS-GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALT-SLTGLT 375
++ GL L+S++L ISD + R + + LK+LN+ +ITD GL + LT LT
Sbjct: 303 IAQGLYQLKSLSLCSCHISDDGINRMVRQMHELKTLNIGQCVRITDKGLELIADHLTQLT 362
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEI 403
+DL+G +IT G + L+ L +
Sbjct: 363 GIDLYGCTKITKRGLERITQLPCLKVLNL 391
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 165/307 (53%), Gaps = 26/307 (8%)
Query: 82 NLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLI-NLVKLDL 138
+++SL+ C ++D GL H ++ +S+L L+ IT + A + NL L+L
Sbjct: 94 HIESLNLCGCFNLTDNGLGHAFVQDISSLRVLNLSLCKQITDSSLGRIAQYLKNLEVLEL 153
Query: 139 ERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT--------NLKSLQIS 188
C+ I G L+ GL +L+SLN++ C ++D + LSG+T L+ L +
Sbjct: 154 GGCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSDVGIGHLSGMTRSAAEGCLTLEKLTLQ 213
Query: 189 -CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDG 244
C K+TD + ++ KGL KL +LNL C ++ A + LS + L LNL C +SD G
Sbjct: 214 DCQKLTDLSLKHISKGLNKLKVLNLSFCGGISDAGMIHLSHMTHLCSLNLRSCDNISDTG 273
Query: 245 CEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGLVNLT-GL 299
+ +GSL++ L++ F ++I D+ L ++ +GL L+SL+L SC I D+G+ + +
Sbjct: 274 IMHLA-MGSLRLTGLDVSFCDKIGDQSLAYIAQGLYQLKSLSLCSCHISDDGINRMVRQM 332
Query: 300 CNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNLD 356
LK L + ++ GL ++ LT L I+L T I+ L ++ L LK LNL
Sbjct: 333 HELKTLNIGQCVRITDKGLELIADHLTQLTGIDLYGCTKITKRGLERITQLPCLKVLNLG 392
Query: 357 ARQITDT 363
Q+T++
Sbjct: 393 LWQMTES 399
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ K + L+ L+ +FC ISD G+ HL +++L SL+ R + I+ G+
Sbjct: 218 LTDLSLKHISKGLNKLKVLNLSFCGGISDAGMIHLSHMTHLCSLNLRSCDNISDTGIMHL 277
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C +I + +GL +L+SL++ C+ D + + + LK+
Sbjct: 278 AMGSLRLTGLDVSFCDKIGDQSLAYIAQGLYQLKSLSLCSCHISDDGINRMVRQMHELKT 337
Query: 185 LQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + L +LT ++L GC +++
Sbjct: 338 LNIGQCVRITDKGLELIADHLTQLTGIDLYGCT-----------------------KITK 374
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++T+
Sbjct: 375 RGLERITQLPCLKVLNLGLWQMTE 398
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 39/197 (19%)
Query: 272 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 322
++G+ ++ESLNL C G+G + +++ L L C +++D+ +G R
Sbjct: 89 IQGMPHIESLNLCGCFNLTDNGLGHAFVQDISSLRVLNLSLCKQITDSSLG----RIAQY 144
Query: 323 LTNLESINLS-FTGISDGSLRKLA-GLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL 379
L NLE + L + I++ L +A GL LKSLNL + R ++D G+ L+ +T
Sbjct: 145 LKNLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSDVGIGHLSGMT------- 197
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTD-------AGLTGLVSLNVSN-SRITSAGL 431
R G L +L+ C LTD GL L LN+S I+ AG+
Sbjct: 198 ---RSAAEGCLTLEKL----TLQDCQK-LTDLSLKHISKGLNKLKVLNLSFCGGISDAGM 249
Query: 432 RHLKPLKNLRSLTLESC 448
HL + +L SL L SC
Sbjct: 250 IHLSHMTHLCSLNLRSC 266
>gi|195487977|ref|XP_002092120.1| GE11843 [Drosophila yakuba]
gi|194178221|gb|EDW91832.1| GE11843 [Drosophila yakuba]
Length = 533
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 188/374 (50%), Gaps = 68/374 (18%)
Query: 7 SQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG 66
S +FN LV R + +V + + R +L+DL LG +L S++LSG
Sbjct: 197 SPSLFNCLV-KRGIKKVQILSLRR-SLKDLVLGV----------------PALTSLNLSG 238
Query: 67 S-DVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGL----EHLRGLSNLTSLSFRRNNAI 119
+V D L H D NL++LD + C QI+D L +HLR NL +L I
Sbjct: 239 CFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGRIAQHLR---NLETLELGGCCNI 295
Query: 120 TAQGMKAFA-GLINLVKLDLERCTRIH-GGLVNLKGL--------MKLESLNIKWCNCIT 169
T G+ A GL L L+L C I G+ +L G ++LE L ++ C ++
Sbjct: 296 TNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLS 355
Query: 170 DSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
D + ++ GLT+LKS+ +S C VTDSG+ +L + KL LNL C D++S +
Sbjct: 356 DEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC-------DNISDI 408
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDS 285
G + L++ G S I SL V F ++I+D+ L H+ +GL L SL+L+
Sbjct: 409 GMAY--------LTEGG----SGINSLDV---SFCDKISDQALTHIAQGLYRLRSLSLNQ 453
Query: 286 CGIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSL 341
C I D G++ + L L+ L + +++ GL+ L+ LTNL++I+L T +S +
Sbjct: 454 CQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGI 513
Query: 342 RKLAGLSSLKSLNL 355
+ L L+ LNL
Sbjct: 514 DIIMKLPKLQKLNL 527
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 164/329 (49%), Gaps = 36/329 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAF-----AGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
RG+ + LS RR+ G+ A +G N+ ++L + L L
Sbjct: 207 RGIKKVQILSLRRSLKDLVLGVPALTSLNLSGCFNVADMNLGHAFSV--------DLPNL 258
Query: 158 ESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGC 214
++L++ C ITD+ + ++ L NL++L++ C +T++G+ + GL+KL LNL C
Sbjct: 259 KTLDLSLCKQITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSC 318
Query: 215 PVTA-------ACLDSLSALGSL--FYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A +A G+L YL L CQ LSD+ ++ + SLK +NL F
Sbjct: 319 WHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCV 378
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRH 319
+TD L HL + LE LNL SC I D G+ LT G + L++S ++ L H
Sbjct: 379 SVTDSGLKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTH 438
Query: 320 LS-GLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNL-DARQITDTGLAALTS-LTGLT 375
++ GL L S++L+ I+D + K+A L L++LN+ +ITD GL L LT L
Sbjct: 439 IAQGLYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLK 498
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEI 403
+DL+G +++ G + L+ L +
Sbjct: 499 TIDLYGCTQLSSKGIDIIMKLPKLQKLNL 527
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 57/276 (20%)
Query: 202 GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF 261
G+ LT LNL GC A ++ LG F ++L +LK L+L
Sbjct: 227 GVPALTSLNLSGC-FNVADMN----LGHAFSVDL----------------PNLKTLDLSL 265
Query: 262 -NEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLEL-SDTQVGSSG 316
+ITD L + + L NLE+L L C I + GL+ + GL LK L L S + G
Sbjct: 266 CKQITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQG 325
Query: 317 LRHLSGLTNLES---INLSFTGI------SDGSLRKLA-GLSSLKSLNLD-ARQITDTGL 365
+ HL+G + + + L + G+ SD +L +A GL+SLKS+NL +TD+GL
Sbjct: 326 IGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGL 385
Query: 366 AALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN- 423
L + L L+L I+D G AYL T+ G +G+ SL+VS
Sbjct: 386 KHLARMPKLEQLNLRSCDNISDIGMAYL----------------TEGG-SGINSLDVSFC 428
Query: 424 SRITSAGLRHL-KPLKNLRSLTLESCKVTANDIKRL 458
+I+ L H+ + L LRSL+L C++T + + ++
Sbjct: 429 DKISDQALTHIAQGLYRLRSLSLNQCQITDHGMLKI 464
>gi|320165522|gb|EFW42421.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 743
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 152/345 (44%), Gaps = 7/345 (2%)
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
+ NN+IT AFAGL L +L+L+ GL L L + + N IT
Sbjct: 64 YLNNNSITIISASAFAGLTALTRLELKTNQITSFPADTFIGLTFLRELFLNY-NQITSFP 122
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
GLT L+ L ++ +++T + L L+L +T+ D+ L L
Sbjct: 123 ADTFIGLTFLRELFLNYNQITSIPTSAFASQTALIQLDLRSNLITSFPADTFIGLTMLKN 182
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L ++ Q + F+ + +L L+L N+I GLT L L+L + I +
Sbjct: 183 LYMDFNQFTSIPANTFTGLTALTFLSLHTNQIASIPANTFTGLTALTFLDLTNNQITNTS 242
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
+ TGL L L+L+D ++ + SGLT L +NL+ I+ S +GL++L
Sbjct: 243 VDAFTGLTALTHLDLTDNRITTISASTFSGLTALRLLNLNGNQITTISANTFSGLTTLNY 302
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD-- 410
L L QI+ +A LT LT + L IT A L L++ +T
Sbjct: 303 LFLTTNQISSISTSAFAGLTVLTEMSLNNNSITSISANTFAVLTALTILDLSDNQITSIP 362
Query: 411 ----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
A LT L +L++++++ITS L L L LE+ +T
Sbjct: 363 ADAFASLTALDTLSLNDNQITSIPANAFTSLTTLHRLPLENNPLT 407
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 135/324 (41%), Gaps = 29/324 (8%)
Query: 86 LDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIH 145
L++N QI+ + GL+ L L F N IT+ AFA L++LDL
Sbjct: 113 LNYN---QITSFPADTFIGLTFLREL-FLNYNQITSIPTSAFASQTALIQLDLRS----- 163
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
N IT GLT LK+L + ++ T GL
Sbjct: 164 --------------------NLITSFPADTFIGLTMLKNLYMDFNQFTSIPANTFTGLTA 203
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
LT L+L + + ++ + L +L +L+L Q+++ + F+ + +L L+L N IT
Sbjct: 204 LTFLSLHTNQIASIPANTFTGLTALTFLDLTNNQITNTSVDAFTGLTALTHLDLTDNRIT 263
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
GLT L LNL+ I +GL L L L+ Q+ S +GLT
Sbjct: 264 TISASTFSGLTALRLLNLNGNQITTISANTFSGLTTLNYLFLTTNQISSISTSAFAGLTV 323
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L ++L+ I+ S A L++L L+L QIT A SLT L L L +IT
Sbjct: 324 LTEMSLNNNSITSISANTFAVLTALTILDLSDNQITSIPADAFASLTALDTLSLNDNQIT 383
Query: 386 DSGAAYLRNFKNLRSLEICGGGLT 409
A + L L + LT
Sbjct: 384 SIPANAFTSLTTLHRLPLENNPLT 407
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 115/259 (44%), Gaps = 6/259 (2%)
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
GL LT L L+ +T+ D+ L L L LN Q++ + F + L+ L L
Sbjct: 78 FAGLTALTRLELKTNQITSFPADTFIGLTFLRELFLNYNQITSFPADTFIGLTFLRELFL 137
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
+N+IT T L L+L S I GL LK L + Q S
Sbjct: 138 NYNQITSIPTSAFASQTALIQLDLRSNLITSFPADTFIGLTMLKNLYMDFNQFTSIPANT 197
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
+GLT L ++L I+ GL++L L+L QIT+T + A T LT LTHLDL
Sbjct: 198 FTGLTALTFLSLHTNQIASIPANTFTGLTALTFLDLTNNQITNTSVDAFTGLTALTHLDL 257
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRH 433
RIT A+ LR L + G +T +GLT L L ++ ++I+S
Sbjct: 258 TDNRITTISASTFSGLTALRLLNLNGNQITTISANTFSGLTTLNYLFLTTNQISSISTSA 317
Query: 434 LKPLKNLRSLTLESCKVTA 452
L L ++L + +T+
Sbjct: 318 FAGLTVLTEMSLNNNSITS 336
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 94/230 (40%), Gaps = 6/230 (2%)
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
G+ L LN ++ F+ + +L L L N+IT GLT L L L+
Sbjct: 58 GTTTQLYLNNNSITIISASAFAGLTALTRLELKTNQITSFPADTFIGLTFLRELFLNYNQ 117
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
I GL L+ L L+ Q+ S + T L ++L I+ GL
Sbjct: 118 ITSFPADTFIGLTFLRELFLNYNQITSIPTSAFASQTALIQLDLRSNLITSFPADTFIGL 177
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGG 407
+ LK+L +D Q T T LT LT L L +I A L L++
Sbjct: 178 TMLKNLYMDFNQFTSIPANTFTGLTALTFLSLHTNQIASIPANTFTGLTALTFLDLTNNQ 237
Query: 408 LTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
+T+ GLT L L+++++RIT+ L LR L L ++T
Sbjct: 238 ITNTSVDAFTGLTALTHLDLTDNRITTISASTFSGLTALRLLNLNGNQIT 287
>gi|291001373|ref|XP_002683253.1| hypothetical protein NAEGRDRAFT_45222 [Naegleria gruberi]
gi|284096882|gb|EFC50509.1| hypothetical protein NAEGRDRAFT_45222 [Naegleria gruberi]
Length = 461
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 162/340 (47%), Gaps = 37/340 (10%)
Query: 68 DVTDSGLIH---LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
D+ +G+I + +NLQ L+ N C +I + G++ + L NL LS N + A+G+
Sbjct: 145 DIPKAGIIFCQAISQLTNLQKLNVNNC-KIGNLGVQFITQLGNLMELSVI-NTGMDAKGL 202
Query: 125 KAFAG-LINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
A L NL KL + L N+K +L SL++ + + K +S + NL
Sbjct: 203 NLIATRLKNLTKLQFNGTVQHVTSLSNMK---QLTSLSMGFDVDVDVKGAKAISEMNNLT 259
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ-LSD 242
+L ++ + D G+ + + +LT L + G +T L L L L LNLN + +
Sbjct: 260 NLSLNTN---DEGLEEICKMTQLTSLKVCGFYLTTLGLKFLPRLKKLRKLNLNDHEDFGN 316
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNL 302
+G + S+ L L SL ++ GI +G +T L L
Sbjct: 317 EGAKLISE------------------------LDQLTSLEINDIGIDKKGAKFITNLKQL 352
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
L +S+ + + G+++L+ L L ++N FT I + ++ L+ +++LK LN+ + D
Sbjct: 353 TSLTISNNPIFNEGVKYLTELPQLTNLNARFTKIDNEGVKYLSEMANLKILNIKRNYVQD 412
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
G+ ++ + LT LD+ I++ G A L+ K L+ L+
Sbjct: 413 LGVESICGMKNLTELDIEQNEISEEGVAKLKEMKQLKVLK 452
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 130/273 (47%), Gaps = 7/273 (2%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
G++ K +++IA++ +L + +G T + L + L SL F + + G + +
Sbjct: 196 GMDAKGLNLIATRLKNLTKLQFNG---TVQHVTSLSNMKQLTSLSMGFDVDVDVKGAKAI 252
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
++NLT+LS N+ +G++ + L L + GL L L KL LN+
Sbjct: 253 SEMNNLTNLSLNTND----EGLEEICKMTQLTSLKVCGFYLTTLGLKFLPRLKKLRKLNL 308
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
+ K +S L L SL+I+ + G ++ L++LT L + P+ +
Sbjct: 309 NDHEDFGNEGAKLISELDQLTSLEINDIGIDKKGAKFITNLKQLTSLTISNNPIFNEGVK 368
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
L+ L L LN ++ ++G + S++ +LK+LN+ N + D + + G+ NL L+
Sbjct: 369 YLTELPQLTNLNARFTKIDNEGVKYLSEMANLKILNIKRNYVQDLGVESICGMKNLTELD 428
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSS 315
++ I +EG+ L + LK L+ +D +
Sbjct: 429 IEQNEISEEGVAKLKEMKQLKVLKKADQRASKE 461
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 33/300 (11%)
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAY---LKGLQKLTLLNL----EGCPVTAACLDSLSA 226
+ +S LTNL+ L ++ K+ + G+ + L L +L+++N +G + A L +L+
Sbjct: 155 QAISQLTNLQKLNVNNCKIGNLGVQFITQLGNLMELSVINTGMDAKGLNLIATRLKNLTK 214
Query: 227 L---GSLFYLNL--NRCQLSD-----------DGCEKFSKIGSLKVLNLGFNEITDECLV 270
L G++ ++ N QL+ G + S++ +L L+L N DE L
Sbjct: 215 LQFNGTVQHVTSLSNMKQLTSLSMGFDVDVDVKGAKAISEMNNLTNLSLNTN---DEGLE 271
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ-VGSSGLRHLSGLTNLESI 329
+ +T L SL + + GL L L L+ L L+D + G+ G + +S L L S+
Sbjct: 272 EICKMTQLTSLKVCGFYLTTLGLKFLPRLKKLRKLNLNDHEDFGNEGAKLISELDQLTSL 331
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGA 389
++ GI + + L L SL + I + G+ LT L LT+L+ +I + G
Sbjct: 332 EINDIGIDKKGAKFITNLKQLTSLTISNNPIFNEGVKYLTELPQLTNLNARFTKIDNEGV 391
Query: 390 AYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSL 443
YL NL+ L I + D G+ L L++ + I+ G+ LK +K L+ L
Sbjct: 392 KYLSEMANLKILNIKRNYVQDLGVESICGMKNLTELDIEQNEISEEGVAKLKEMKQLKVL 451
>gi|343417958|emb|CCD19884.1| leucine-rich repeat region [Trypanosoma vivax Y486]
Length = 389
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 174/338 (51%), Gaps = 33/338 (9%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
L + S+L++LD + C I+D + L LS+L +L AIT + + L +L L
Sbjct: 62 LSELSSLRTLDLSHCTGITD--VSPLSKLSSLRTLDLSHCTAIT--DVSPLSKLSSLRML 117
Query: 137 DLERCTRIHGGLVNLKGLMKLESL-NIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTD 194
DL CT G+ ++ L KL SL + +C +D+ PLS L++L++L +S C+ +TD
Sbjct: 118 DLSHCT----GITDVSPLSKLSSLRTLDLSHCTGITDVSPLSELSSLRTLDLSHCTGITD 173
Query: 195 SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSL 254
++ L L L L+L C + LS L SL L+L+ C D + G
Sbjct: 174 --VSPLSELSSLRTLDLSHCTGITD-VSPLSKLSSLHELDLSHCTGITDVSLLYRFFGLD 230
Query: 255 KVLNLGFNE---ITDECLVHLKGLTNLESLNLDSC-GIGD-EGLVNLTGLCNLKCLELSD 309
K LG + ITD + L L+ L +L+L C GI D L L GLC L +LS
Sbjct: 231 K---LGLSHCTGITD--VSPLSKLSGLRTLDLSHCTGITDVSPLSKLGGLCEL---DLSH 282
Query: 310 TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAA 367
G + + LS L++L ++LS TGI+D S L+ LSSL++L+L R ITD ++
Sbjct: 283 CT-GITDVSPLSKLSSLRKLDLSHCTGITDVS--PLSVLSSLRTLDLSHCRGITD--VSP 337
Query: 368 LTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
L++L+GL LDL G SG L + LR L G
Sbjct: 338 LSTLSGLEVLDLSGCTGVRSGLESLCSLSFLRYLSFLG 375
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 33/226 (14%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNF 90
+L+ L L G+ D S+ SSL ++DLS + +TD L S+L LD +
Sbjct: 159 SLRTLDLSHCTGITDVSP---LSELSSLRTLDLSHCTGITDVS--PLSKLSSLHELDLSH 213
Query: 91 CIQISDG------------GLEHLRGLSNLTSLS-------FRRNNAITAQGMKAFAGLI 131
C I+D GL H G+++++ LS ++ + + L
Sbjct: 214 CTGITDVSLLYRFFGLDKLGLSHCTGITDVSPLSKLSGLRTLDLSHCTGITDVSPLSKLG 273
Query: 132 NLVKLDLERCTRIHGGLVNLKGLMKLESL-NIKWCNCITDSDMKPLSGLTNLKSLQIS-C 189
L +LDL CT G+ ++ L KL SL + +C +D+ PLS L++L++L +S C
Sbjct: 274 GLCELDLSHCT----GITDVSPLSKLSSLRKLDLSHCTGITDVSPLSVLSSLRTLDLSHC 329
Query: 190 SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
+TD ++ L L L +L+L GC + L+SL +L L YL+
Sbjct: 330 RGITD--VSPLSTLSGLEVLDLSGCTGVRSGLESLCSLSFLRYLSF 373
>gi|290989399|ref|XP_002677325.1| predicted protein [Naegleria gruberi]
gi|284090932|gb|EFC44581.1| predicted protein [Naegleria gruberi]
Length = 412
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 161/334 (48%), Gaps = 37/334 (11%)
Query: 94 ISDGGLEHLRGL--SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL 151
+SD ++H G S++ L F + MK ++ + NL L +++C V L
Sbjct: 64 VSDK-IDHKWGFTGSSIKKLKFSHLTIKSTDFMKIYSNMKNLKSLSMKKCRIEKKDFVYL 122
Query: 152 KGLMKLESLNI--KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
+ +LESLNI + N + K + LTNLK D GI+
Sbjct: 123 MKIKQLESLNIIPHFSNITNEEICKICTNLTNLK----------DFGIS----------- 161
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
G + L ++ + SL L+++ +L ++ ++ K+ L LN+G N L
Sbjct: 162 ---GMSLQYKTLQYITNMKSLTSLDISNTELYEEYLQEIGKMTHLTSLNIGDNGTIP--L 216
Query: 270 VHLKGLTNLESLNLDSCGI--GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL-SGLTNL 326
++K L L+SLN++ I G L L L +L L +S + + GL++L +L
Sbjct: 217 QYIKSLAGLKSLNINGRFINNGFYELRELKDLHSLTELSVSHNTIKTKGLKYLIDTFPDL 276
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
S+++S+ G+ GS++K+ L L L++ I+D L +T L LT L++ +ITD
Sbjct: 277 TSLDISYNGL--GSIKKIRKLKHLTKLDISNNSISDQDLIYITCLPQLTKLNISSNQITD 334
Query: 387 SGAAYLRNFKNLRSLEICGGGLT-DAGLTGLVSL 419
+GA + ++LR++++ +T D G+++L
Sbjct: 335 NGALLFASMESLRNIDVRFNDITNDKVFQGMINL 368
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 119/244 (48%), Gaps = 24/244 (9%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
+SG + L ++ + +L SLD + ++ + L+ + +++LTSL+ N I Q
Sbjct: 160 ISGMSLQYKTLQYITNMKSLTSLDIS-NTELYEEYLQEIGKMTHLTSLNIGDNGTIPLQY 218
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVN--------LKGLMKLESLNIKWCNCITDSDMKP 175
+K+ AGL +L I+G +N LK L L L++ N I +K
Sbjct: 219 IKSLAGLKSL---------NINGRFINNGFYELRELKDLHSLTELSVS-HNTIKTKGLKY 268
Query: 176 L-SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L +L SL IS + + I ++ L+ LT L++ ++ L ++ L L LN
Sbjct: 269 LIDTFPDLTSLDISYNGL--GSIKKIRKLKHLTKLDISNNSISDQDLIYITCLPQLTKLN 326
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
++ Q++D+G F+ + SL+ +++ FN+IT++ + +G+ NLE L S +
Sbjct: 327 ISSNQITDNGALLFASMESLRNIDVRFNDITNDKV--FQGMINLEKLKFKSFSLEPSSRK 384
Query: 295 NLTG 298
N G
Sbjct: 385 NKDG 388
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 111/250 (44%), Gaps = 28/250 (11%)
Query: 245 CEKFSKIG------SLKV------LNLGFNEITDECLVHLKGLT--NLESLNLDSCGIGD 290
C+++ +IG S+K+ LN + + + + H G T +++ L I
Sbjct: 32 CQQWFRIGMTRYSFSIKLNQTSQQLNKWWKRLVSDKIDHKWGFTGSSIKKLKFSHLTIKS 91
Query: 291 EGLVNL-TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL--SFTGISDGSLRKL-AG 346
+ + + + NLK L + ++ +L + LES+N+ F+ I++ + K+
Sbjct: 92 TDFMKIYSNMKNLKSLSMKKCRIEKKDFVYLMKIKQLESLNIIPHFSNITNEEICKICTN 151
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG 406
L++LK + + L +T++ LT LD+ + + + +L SL I
Sbjct: 152 LTNLKDFGISGMSLQYKTLQYITNMKSLTSLDISNTELYEEYLQEIGKMTHLTSLNIGDN 211
Query: 407 GLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRD 462
G L GL SLN+ N R + G L+ LK+L SLT V+ N IK ++
Sbjct: 212 GTIPLQYIKSLAGLKSLNI-NGRFINNGFYELRELKDLHSLT--ELSVSHNTIK---TKG 265
Query: 463 LPNLVSFRPE 472
L L+ P+
Sbjct: 266 LKYLIDTFPD 275
>gi|95108203|emb|CAD17823.3| lrr-gala family type III effector protein (gala 2) [Ralstonia
solanacearum GMI1000]
Length = 1035
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 183/408 (44%), Gaps = 14/408 (3%)
Query: 58 SLLSVDLSG---SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
S+ +DLSG S V+++GL +L L SLD + I + G + L ++LTSL+
Sbjct: 632 SVRHLDLSGCTGSAVSEAGLAYLARLP-LASLDLSDT-GIGNRGAQALAASASLTSLNLS 689
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N I G +A L LD+ + G L G L SL ++ I D ++
Sbjct: 690 -GNGIGTAGAEALGRNTVLTALDISANPIRNAGAQALAGSRSLTSLELR-DTGIEDGGIE 747
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L+ T L+SL IS + ++D A L + LT L GC +T L+ + SL L
Sbjct: 748 ALAANTVLRSLDISGNDLSDQSAAALAANRTLTSLKANGCGLTNDMAQQLARIRSLRTLE 807
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
+ + D G ++ SL+ LNL N IT + L L L+SL++ G GD G +
Sbjct: 808 VGSNSIGDAGVLTIARNASLRSLNLSRNPITPQGLYPLALSRTLKSLDVSRIGCGDRGAL 867
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
L+G L L+L +V S G R L+ L S++L I + R LA L SLN
Sbjct: 868 LLSGNRALTSLKLGFNRVSSEGARRLAANRTLVSLDLRGNTIDVAAARALANAEPLASLN 927
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT 414
+ ++ D AL LT LD+ R++ A L N L SL I + G
Sbjct: 928 VSDCRLDDAVACALAESRTLTSLDVSWNRLSHRAARALANNPVLASLYISHNDIGPEGAQ 987
Query: 415 GLVS------LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIK 456
L L+ +RI AG R L+ +R T ++ A D+
Sbjct: 988 ALADSASLTFLDARANRIGEAGARLLEANTRMRG-TPQNPHFLAQDVP 1034
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 104/210 (49%), Gaps = 8/210 (3%)
Query: 264 ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL 323
+++ L +L L L SL+L GIG+ G L +L L LS +G++G L
Sbjct: 646 VSEAGLAYLARLP-LASLDLSDTGIGNRGAQALAASASLTSLNLSGNGIGTAGAEALGRN 704
Query: 324 TNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGAR 383
T L ++++S I + + LAG SL SL L I D G+ AL + T L LD+ G
Sbjct: 705 TVLTALDISANPIRNAGAQALAGSRSLTSLELRDTGIEDGGIEALAANTVLRSLDISGND 764
Query: 384 ITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPL 437
++D AA L + L SL+ G GLT+ A + L +L V ++ I AG+ +
Sbjct: 765 LSDQSAAALAANRTLTSLKANGCGLTNDMAQQLARIRSLRTLEVGSNSIGDAGVLTIARN 824
Query: 438 KNLRSLTLESCKVTANDIKRLQ-SRDLPNL 466
+LRSL L +T + L SR L +L
Sbjct: 825 ASLRSLNLSRNPITPQGLYPLALSRTLKSL 854
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 156/356 (43%), Gaps = 29/356 (8%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
LR L SLSF + ++ ++A + LDL CT G V+ GL L
Sbjct: 603 FSRLRNYPALESLSF--HGPLSLADLRALPPSVR--HLDLSGCT---GSAVSEAGLAYLA 655
Query: 159 SLNIKWCNC----ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC 214
L + + I + + L+ +L SL +S + + +G L LT L++
Sbjct: 656 RLPLASLDLSDTGIGNRGAQALAASASLTSLNLSGNGIGTAGAEALGRNTVLTALDISAN 715
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG 274
P+ A +L+ SL L L + D G E + L+ L++ N+++D+ L
Sbjct: 716 PIRNAGAQALAGSRSLTSLELRDTGIEDGGIEALAANTVLRSLDISGNDLSDQSAAALAA 775
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
L SL + CG+ ++ L + +L+ LE+ +G +G+ ++ +L S+NLS
Sbjct: 776 NRTLTSLKANGCGLTNDMAQQLARIRSLRTLEVGSNSIGDAGVLTIARNASLRSLNLSRN 835
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
I+ L LA +LKSL++ D G L+ LT L L R++ GA L
Sbjct: 836 PITPQGLYPLALSRTLKSLDVSRIGCGDRGALLLSGNRALTSLKLGFNRVSSEGARRLAA 895
Query: 395 FKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
+ L SL++ G +++V+ +R + + L SL + C++
Sbjct: 896 NRTLVSLDLRGN-----------TIDVAAARALAN-------AEPLASLNVSDCRL 933
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 121/300 (40%), Gaps = 71/300 (23%)
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
D + LSGL + L+ +LKG TL +L+ P T L
Sbjct: 94 DRRALSGLRDHPHLES----------VHLKG--DFTLADLKALPTT------------LR 129
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
+L+L+ C GS K + +L GL LESLN+ IGD
Sbjct: 130 HLDLSEC------------TGSAKSF---------RAIAYLAGLP-LESLNVAGAEIGDG 167
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
G L +LK L + + +SG R L+ LES++L+ I D + LAG SL+
Sbjct: 168 GARLLAANPSLKSLNAASGGISASGARMLAESPTLESLDLTQNAIGDAGAQALAGSRSLR 227
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDL------------------FGARITDSGAAYLR 393
L + +TD G AL L LDL IT GA L
Sbjct: 228 HLAVRNGLVTDLGTRALALNPALVSLDLGNLVTETGNQVEQDGYDKTANNITAQGAWALA 287
Query: 394 NFKNLRSLEICGGGL-TDAGLTGLV------SLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
++L+SL + G L D G+ L SLNV+ + +TSA + L L SL++
Sbjct: 288 QNRSLKSLSVQGNDLCGDDGVRALARNRTLTSLNVAFTNMTSASAKALADNPVLTSLSVR 347
>gi|290996013|ref|XP_002680577.1| predicted protein [Naegleria gruberi]
gi|284094198|gb|EFC47833.1| predicted protein [Naegleria gruberi]
Length = 395
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 147/321 (45%), Gaps = 2/321 (0%)
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
G+E + L LT L R + +G K + L L LD+ + G + + +L
Sbjct: 68 GVEAIGLLKQLTELDVRYC-RMGEEGSKIISKLGQLTNLDISHNSIRSKGFKFICEMKQL 126
Query: 158 ESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
L +++ N + S + L L L IS + + D G + L++LT L++ ++
Sbjct: 127 IILKVQY-NKLEKSSSNQIEDLKQLTKLDISGNNIDDEGAKSIGQLKQLTKLDISVNYLS 185
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 277
+ LS L L YLN++ + ++ + + L LN+G N++ E + + +
Sbjct: 186 NVGVKHLSDLQQLIYLNVSYNDVDEEVAKDIYNMKKLSKLNIGGNDLNIESFSMIGKMDH 245
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
L+ L G+G++G ++ L +L L++S+ Q+ +G LS + +L +++ F I
Sbjct: 246 LKKLEFGVVGLGNDGFEFISKLKHLTMLDISENQINDNGAELLSRMEHLTKLDVGFNSIG 305
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
D +R ++ L L LN + + G ++ + LT L + + D G + KN
Sbjct: 306 DRGIRSISMLKKLTDLNARNNEFGNEGAKYISEMMQLTILQVDENKFGDEGIIAITKMKN 365
Query: 398 LRSLEICGGGLTDAGLTGLVS 418
L+ L I + G L++
Sbjct: 366 LKKLRIFSEYMDKEGKDALLN 386
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 149/332 (44%), Gaps = 4/332 (1%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
+E + LT L+ N + +G++A L L +LD+ C G + L +L
Sbjct: 46 IEPIGKFKQLTILNISDNPIM--KGVEAIGLLKQLTELDVRYCRMGEEGSKIISKLGQLT 103
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
+L+I N I K + + L L++ +K+ S ++ L++LT L++ G +
Sbjct: 104 NLDISH-NSIRSKGFKFICEMKQLIILKVQYNKLEKSSSNQIEDLKQLTKLDISGNNIDD 162
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
S+ L L L+++ LS+ G + S + L LN+ +N++ +E + + L
Sbjct: 163 EGAKSIGQLKQLTKLDISVNYLSNVGVKHLSDLQQLIYLNVSYNDVDEEVAKDIYNMKKL 222
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
LN+ + E + + +LK LE +G+ G +S L +L +++S I+D
Sbjct: 223 SKLNIGGNDLNIESFSMIGKMDHLKKLEFGVVGLGNDGFEFISKLKHLTMLDISENQIND 282
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 398
L+ + L L++ I D G+ +++ L LT L+ + GA Y+ L
Sbjct: 283 NGAELLSRMEHLTKLDVGFNSIGDRGIRSISMLKKLTDLNARNNEFGNEGAKYISEMMQL 342
Query: 399 RSLEICGGGLTDAGLTGLVSL-NVSNSRITSA 429
L++ D G+ + + N+ RI S
Sbjct: 343 TILQVDENKFGDEGIIAITKMKNLKKLRIFSE 374
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 132/318 (41%), Gaps = 55/318 (17%)
Query: 186 QISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGC 245
++ SK T + I + ++LT+LN+ P+ +++ L L L++ C++ ++G
Sbjct: 35 ELKLSKHTFNDIEPIGKFKQLTILNISDNPIMKGV-EAIGLLKQLTELDVRYCRMGEEGS 93
Query: 246 EKFSKIGSLK------------------------VLNLGFNEITDECLVHLKGLTNLESL 281
+ SK+G L +L + +N++ ++ L L L
Sbjct: 94 KIISKLGQLTNLDISHNSIRSKGFKFICEMKQLIILKVQYNKLEKSSSNQIEDLKQLTKL 153
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 341
++ I DEG ++ L L L++S + + G++HLS L L +N+S+ + +
Sbjct: 154 DISGNNIDDEGAKSIGQLKQLTKLDISVNYLSNVGVKHLSDLQQLIYLNVSYNDVDEEVA 213
Query: 342 RKLAGLSSLKSLNLDARQIT------------------------DTGLAALTSLTGLTHL 377
+ + + L LN+ + + G ++ L LT L
Sbjct: 214 KDIYNMKKLSKLNIGGNDLNIESFSMIGKMDHLKKLEFGVVGLGNDGFEFISKLKHLTML 273
Query: 378 DLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGL 431
D+ +I D+GA L ++L L++ + D G L L LN N+ + G
Sbjct: 274 DISENQINDNGAELLSRMEHLTKLDVGFNSIGDRGIRSISMLKKLTDLNARNNEFGNEGA 333
Query: 432 RHLKPLKNLRSLTLESCK 449
+++ + L L ++ K
Sbjct: 334 KYISEMMQLTILQVDENK 351
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 35/264 (13%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
L +D+SG+++ D G + L LD + +S+ G++HL L L L+ N
Sbjct: 148 KQLTKLDISGNNIDDEGAKSIGQLKQLTKLDISVNY-LSNVGVKHLSDLQQLIYLNVSYN 206
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL----ESLNIKWCNCITDSD 172
+ +D E I+ N+K L KL LNI+ + I D
Sbjct: 207 D------------------VDEEVAKDIY----NMKKLSKLNIGGNDLNIESFSMIGKMD 244
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
+LK L+ + + G ++ L+ LT+L++ + + LS + L
Sbjct: 245 --------HLKKLEFGVVGLGNDGFEFISKLKHLTMLDISENQINDNGAELLSRMEHLTK 296
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L++ + D G S + L LN NE +E ++ + L L +D GDEG
Sbjct: 297 LDVGFNSIGDRGIRSISMLKKLTDLNARNNEFGNEGAKYISEMMQLTILQVDENKFGDEG 356
Query: 293 LVNLTGLCNLKCLELSDTQVGSSG 316
++ +T + NLK L + + G
Sbjct: 357 IIAITKMKNLKKLRIFSEYMDKEG 380
>gi|290993458|ref|XP_002679350.1| leucine rich repeat protein [Naegleria gruberi]
gi|284092966|gb|EFC46606.1| leucine rich repeat protein [Naegleria gruberi]
Length = 528
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 167/353 (47%), Gaps = 42/353 (11%)
Query: 152 KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
K L L++ NC + +K L L +L L +S +K + G+ Y+ ++ LT LN+
Sbjct: 125 KRFYNLRELDLSGQNCYREG-VKCLKSLKHLTVLNVSKTKCAN-GVKYIGMIENLTSLNI 182
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH 271
+ ++ LS+L L L++N C L+ + + S++ SL L++G N++ L+
Sbjct: 183 SSVHLENQDVEHLSSLKKLTSLDVNNCNLTFEDADIISRLKSLTFLDIGNNDLGPLGLLP 242
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
+ + +L++L+++ I E +LT + NL L +S G+ GL+ +S + NL +++
Sbjct: 243 ISSMESLQTLHINRIWIESESCESLTKMINLTELYISKNDFGNEGLKWISSMKNLRVLDI 302
Query: 332 S----FTGISDGSLRKLAGLSSLKSLNLDARQITDTG----------------------- 364
+ D + + +A L+ L LN+ +IT +G
Sbjct: 303 GNHSIIDALGDEAAKLVASLTQLTYLNISQHEITSSGAKYLTSLTKLTTLFIDGNEICDD 362
Query: 365 -LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI------CGGGLTDAGLTG-L 416
L +++SL LT+L++ G +I+ G + L L+I C L GL L
Sbjct: 363 FLDSISSLKELTYLNISGGQISVKGVKSISKLPRLTILDISECVGCCSEVLKQLGLMKQL 422
Query: 417 VSLNVSNSRITSA--GLRHL-KPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
SL++S + + + G ++ K L NL L + C + N IK + LPNL
Sbjct: 423 TSLHLSLTDLVESVEGFKYWHKNLINLTYLEMNFCGLDDNAIKWISG--LPNL 473
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 159/347 (45%), Gaps = 49/347 (14%)
Query: 52 IASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSL 111
I S+ SL +D+ +D+ GL+ + +LQ+L N I I E L + NLT L
Sbjct: 218 IISRLKSLTFLDIGNNDLGPLGLLPISSMESLQTLHINR-IWIESESCESLTKMINLTEL 276
Query: 112 SFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDS 171
+N+ +G+K + + NL LD+ + I + + D
Sbjct: 277 YISKND-FGNEGLKWISSMKNLRVLDIGNHSII---------------------DALGDE 314
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
K ++ LT L L IS ++T SG YL L KLT L ++G + LDS+S+L L
Sbjct: 315 AAKLVASLTQLTYLNISQHEITSSGAKYLTSLTKLTTLFIDGNEICDDFLDSISSLKELT 374
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
YLN++ Q+S G + SK+ L +L++ EC+ G E
Sbjct: 375 YLNISGGQISVKGVKSISKLPRLTILDIS------ECV-----------------GCCSE 411
Query: 292 GLVNLTGLCNLKCLELSDTQVGSS--GLRHL-SGLTNLESINLSFTGISDGSLRKLAGLS 348
L L + L L LS T + S G ++ L NL + ++F G+ D +++ ++GL
Sbjct: 412 VLKQLGLMKQLTSLHLSLTDLVESVEGFKYWHKNLINLTYLEMNFCGLDDNAIKWISGLP 471
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF 395
+LK L+L + +TD + L + L +L LFG +T+ L +
Sbjct: 472 NLKYLDLQSNDLTDDCIQHLLGMKKLEYLSLFGNNMTEKKTKRLEKY 518
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 190/445 (42%), Gaps = 75/445 (16%)
Query: 83 LQSLDFNFCI----QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL 138
+ + FNF I + H + + + L + N I K F NL +LDL
Sbjct: 79 MTRIKFNFRISERREWKKLSQSHQKYIDRVECLHLKYNLLIFTIIQKRFY---NLRELDL 135
Query: 139 --ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG 196
+ C R G+ LK L L LN+ C + +K + + NL SL IS + +
Sbjct: 136 SGQNCYR--EGVKCLKSLKHLTVLNVSKTKCA--NGVKYIGMIENLTSLNISSVHLENQD 191
Query: 197 IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL----------------------- 233
+ +L L+KLT L++ C +T D +S L SL +L
Sbjct: 192 VEHLSSLKKLTSLDVNNCNLTFEDADIISRLKSLTFLDIGNNDLGPLGLLPISSMESLQT 251
Query: 234 -NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI---- 288
++NR + + CE +K+ +L L + N+ +E L + + NL L++ + I
Sbjct: 252 LHINRIWIESESCESLTKMINLTELYISKNDFGNEGLKWISSMKNLRVLDIGNHSIIDAL 311
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
GDE + L L L +S ++ SSG ++L+ LT L ++ + I D L ++ L
Sbjct: 312 GDEAAKLVASLTQLTYLNISQHEITSSGAKYLTSLTKLTTLFIDGNEICDDFLDSISSLK 371
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDL----------------------FGARITD 386
L LN+ QI+ G+ +++ L LT LD+ +TD
Sbjct: 372 ELTYLNISGGQISVKGVKSISKLPRLTILDISECVGCCSEVLKQLGLMKQLTSLHLSLTD 431
Query: 387 -----SGAAYL-RNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHL 434
G Y +N NL LE+ GL D +GL L L++ ++ +T ++HL
Sbjct: 432 LVESVEGFKYWHKNLINLTYLEMNFCGLDDNAIKWISGLPNLKYLDLQSNDLTDDCIQHL 491
Query: 435 KPLKNLRSLTLESCKVTANDIKRLQ 459
+K L L+L +T KRL+
Sbjct: 492 LGMKKLEYLSLFGNNMTEKKTKRLE 516
>gi|195430566|ref|XP_002063325.1| GK21848 [Drosophila willistoni]
gi|194159410|gb|EDW74311.1| GK21848 [Drosophila willistoni]
Length = 543
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 189/374 (50%), Gaps = 68/374 (18%)
Query: 7 SQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG 66
S +FN LV R + +V + + R +L+DL LG +L S++LSG
Sbjct: 207 SPSLFNCLV-RRGIKKVQILSLRR-SLKDLVLGV----------------PALTSLNLSG 248
Query: 67 S-DVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGL----EHLRGLSNLTSLSFRRNNAI 119
+V D L H D NL++LD + C QI+D L +HLR NL +L I
Sbjct: 249 CFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGRIAQHLR---NLETLELGGCCNI 305
Query: 120 TAQGMKAFA-GLINLVKLDLERCTRIH-GGLVNLKGL--------MKLESLNIKWCNCIT 169
T G+ A GL L L+L C I G+ +L G ++LE L ++ C ++
Sbjct: 306 TNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLS 365
Query: 170 DSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
D + ++ GLT+LKS+ +S C VTDSG+ +L + KL LNL C D++S +
Sbjct: 366 DEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC-------DNISDI 418
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDS 285
G + L++ G S I SL V F ++I+D+ L H+ +GL L SL+L+
Sbjct: 419 GMAY--------LTEGG----SGINSLDV---SFCDKISDQALTHIAQGLYRLRSLSLNQ 463
Query: 286 CGIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSL 341
C I D+G++ + L L+ L + +++ GL+ L+ LTNL++I+L T ++ +
Sbjct: 464 CQITDQGMLKIAKSLQELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLTSKGI 523
Query: 342 RKLAGLSSLKSLNL 355
+ L L+ LNL
Sbjct: 524 DIIMKLPKLQKLNL 537
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 166/329 (50%), Gaps = 36/329 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAF-----AGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
RG+ + LS RR+ G+ A +G N+ ++L H V+L L
Sbjct: 217 RGIKKVQILSLRRSLKDLVLGVPALTSLNLSGCFNVADMNLG-----HAFSVDLP---NL 268
Query: 158 ESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGC 214
++L++ C ITD+ + ++ L NL++L++ C +T++G+ + GL+KL LNL C
Sbjct: 269 KTLDLSLCKQITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSC 328
Query: 215 PVTA-------ACLDSLSALGSLF--YLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A +A G+L YL L CQ LSD+ ++ + SLK +NL F
Sbjct: 329 WHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCV 388
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRH 319
+TD L HL + LE LNL SC I D G+ LT G + L++S ++ L H
Sbjct: 389 SVTDSGLKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTH 448
Query: 320 LS-GLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNL-DARQITDTGLAALTS-LTGLT 375
++ GL L S++L+ I+D + K+A L L++LN+ +ITD GL L LT L
Sbjct: 449 IAQGLYRLRSLSLNQCQITDQGMLKIAKSLQELENLNIGQCSRITDKGLQTLAEDLTNLK 508
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEI 403
+DL+G ++T G + L+ L +
Sbjct: 509 TIDLYGCTQLTSKGIDIIMKLPKLQKLNL 537
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 130/269 (48%), Gaps = 57/269 (21%)
Query: 202 GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF 261
G+ LT LNL GC A ++ LG F ++L +LK L+L
Sbjct: 237 GVPALTSLNLSGC-FNVADMN----LGHAFSVDL----------------PNLKTLDLSL 275
Query: 262 -NEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLEL-SDTQVGSSG 316
+ITD L + + L NLE+L L C I + GL+ + GL LK L L S + G
Sbjct: 276 CKQITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQG 335
Query: 317 LRHLSGLTNLES---INLSFTGI------SDGSLRKLA-GLSSLKSLNLD-ARQITDTGL 365
+ HL+G + + + L + G+ SD +L +A GL+SLKS+NL +TD+GL
Sbjct: 336 IGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGL 395
Query: 366 AALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN- 423
L + L L+L I+D G AYL T+ G +G+ SL+VS
Sbjct: 396 KHLARMPKLEQLNLRSCDNISDIGMAYL----------------TEGG-SGINSLDVSFC 438
Query: 424 SRITSAGLRHL-KPLKNLRSLTLESCKVT 451
+I+ L H+ + L LRSL+L C++T
Sbjct: 439 DKISDQALTHIAQGLYRLRSLSLNQCQIT 467
>gi|374850803|dbj|BAL53782.1| hypothetical conserved protein, partial [uncultured planctomycete]
Length = 351
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 6/255 (2%)
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
+T QG + A L L +L L L L L LE+L++ W + + +K +
Sbjct: 100 LTPQGWRKIAELRALRELYLADSNVDDEDLQYLANLGSLETLDLAW-TPMKGTGLKHVGQ 158
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+ NL+ L ++ +K+ D IA + L KL L+L G VT ++ +S L +L L RC
Sbjct: 159 IRNLRVLLLTHTKIADEHIAQIVPLTKLEKLDLGGTLVTDKGMEFVSRLANLKDL---RC 215
Query: 239 Q--LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
L+DD + +++ L+ L L + +T + + LK L+ L SL+L I D L +
Sbjct: 216 PESLTDDATKLLARLVQLRTLCLSSSCVTSQGVESLKTLSELRSLDLSRTKIDDRALDQI 275
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
T L L+ L LS+T + + + NL+S+ L T ISD L+++ + +L+ LNL
Sbjct: 276 TVLSKLEHLLLSETNITDAVAPVIGRFMNLKSLFLDGTKISDSVLQEVGKVHTLERLNLS 335
Query: 357 ARQITDTGLAALTSL 371
+T GL LT L
Sbjct: 336 KTAVTGEGLQHLTPL 350
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 166 NCITDSDMKPLSGLTN--LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
N I D ++ L+ + + SL +S +++T G + L+ L L L V L
Sbjct: 72 NLIGDVEIAKLASIPEVCICSLDLSHARLTPQGWRKIAELRALRELYLADSNVDDEDLQY 131
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
L+ LGSL L+L + G + +I +L+VL L +I DE + + LT LE L+L
Sbjct: 132 LANLGSLETLDLAWTPMKGTGLKHVGQIRNLRVLLLTHTKIADEHIAQIVPLTKLEKLDL 191
Query: 284 DSCGIGDEGLVNLTGLCNLK---CLE--------------------LSDTQVGSSGLRHL 320
+ D+G+ ++ L NLK C E LS + V S G+ L
Sbjct: 192 GGTLVTDKGMEFVSRLANLKDLRCPESLTDDATKLLARLVQLRTLCLSSSCVTSQGVESL 251
Query: 321 SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
L+ L S++LS T I D +L ++ LS L+ L L ITD + L L L
Sbjct: 252 KTLSELRSLDLSRTKIDDRALDQITVLSKLEHLLLSETNITDAVAPVIGRFMNLKSLFLD 311
Query: 381 GARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPL 437
G +I+DS L+ + +LE LN+S + +T GL+HL PL
Sbjct: 312 GTKISDS---VLQEVGKVHTLE---------------RLNLSKTAVTGEGLQHLTPL 350
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 7/177 (3%)
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
SL+L + +G + L L+ L L+D+ V L++L+ L +LE+++L++T +
Sbjct: 92 SLDLSHARLTPQGWRKIAELRALRELYLADSNVDDEDLQYLANLGSLETLDLAWTPMKGT 151
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
L+ + + +L+ L L +I D +A + LT L LDL G +TD G ++ NL+
Sbjct: 152 GLKHVGQIRNLRVLLLTHTKIADEHIAQIVPLTKLEKLDLGGTLVTDKGMEFVSRLANLK 211
Query: 400 SLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
L C LTD A L L +L +S+S +TS G+ LK L LRSL L K+
Sbjct: 212 DLR-CPESLTDDATKLLARLVQLRTLCLSSSCVTSQGVESLKTLSELRSLDLSRTKI 267
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 124/277 (44%), Gaps = 35/277 (12%)
Query: 24 SLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNL 83
L A R+ L D V+D+ + +A+ GS L ++DL+ + + +GL H+ NL
Sbjct: 110 ELRALRELYLAD------SNVDDEDLQYLANLGS-LETLDLAWTPMKGTGLKHVGQIRNL 162
Query: 84 QSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTR 143
+ L +I+D + + L+ L L +T +GM+ + L NL L RC
Sbjct: 163 RVLLLTHT-KIADEHIAQIVPLTKLEKLDL-GGTLVTDKGMEFVSRLANLKDL---RCP- 216
Query: 144 IHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGL 203
ESL TD K L+ L L++L +S S VT G+ LK L
Sbjct: 217 --------------ESL--------TDDATKLLARLVQLRTLCLSSSCVTSQGVESLKTL 254
Query: 204 QKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNE 263
+L L+L + LD ++ L L +L L+ ++D + +LK L L +
Sbjct: 255 SELRSLDLSRTKIDDRALDQITVLSKLEHLLLSETNITDAVAPVIGRFMNLKSLFLDGTK 314
Query: 264 ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
I+D L + + LE LNL + EGL +LT L
Sbjct: 315 ISDSVLQEVGKVHTLERLNLSKTAVTGEGLQHLTPLA 351
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 360 ITDTGLAALTSLTG--LTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------A 411
I D +A L S+ + LDL AR+T G + + LR L + + D A
Sbjct: 74 IGDVEIAKLASIPEVCICSLDLSHARLTPQGWRKIAELRALRELYLADSNVDDEDLQYLA 133
Query: 412 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
L L +L+++ + + GL+H+ ++NLR L L K+ I ++
Sbjct: 134 NLGSLETLDLAWTPMKGTGLKHVGQIRNLRVLLLTHTKIADEHIAQI 180
>gi|281211117|gb|EFA85283.1| Histidine kinase A [Polysphondylium pallidum PN500]
Length = 1839
Score = 88.2 bits (217), Expect = 7e-15, Method: Composition-based stats.
Identities = 119/445 (26%), Positives = 205/445 (46%), Gaps = 67/445 (15%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHL-KDCSNLQSLDFNFC 91
LQ++ L + V D + IA+ L++V L ++TD+ +IHL + C + +L + C
Sbjct: 1413 LQNINLNKCRAVTDDKIIAIANMQLPLVNVYLKKCNITDNAIIHLTQSCPKIAALQLSGC 1472
Query: 92 IQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGM-KAFAGLINLVKLDL-ERCTRIHGGL 148
+ D + + L L +R +T+ + K F L N+ + L E +
Sbjct: 1473 KNLGDASINAIATNCLGLRELRMKRCPLVTSNSIDKMFRLLHNIHIVTLAESPMAVSDNT 1532
Query: 149 VNLKG--LMKLESLNIKWCNCITDSDMKPLSGLTN-LKSLQIS-CSKVTDSGIAYL-KGL 203
+ L G +++ +N+ + ITD + L TN ++ L IS C +TD GI ++ +
Sbjct: 1533 LRLMGKYCTEIQCVNVSHNSIITDVGLINLVKFTNTIQELNISQCVNITDIGIQHIAQAC 1592
Query: 204 QKLTLLNLEGC-------PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 256
KL +L + G P+ +C D L L+++ C KI S
Sbjct: 1593 GKLRILRMSGLNNVTSLKPIGKSCAD-------LVELDISECH----------KISS--- 1632
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTG-LCNLKCLELSDTQVGS 314
+LG+ IT KG L S L C G+ D L++ G + + L + D G+
Sbjct: 1633 -DLGY--IT-------KGCPKLTSFKLRRCYGLQDVSLLSEDGEIHAMSKLSVLDWSYGN 1682
Query: 315 SGLRHLSGLT----NLESINLSF-TGISDGSLRKLAG-LSSLKSLNLDAR-QITDTGLAA 367
+ + +T +L S+N+S+ ++D S+ ++A LS+LK L +D+ ITD G+ A
Sbjct: 1683 IEFQTIHSITHSCKSLTSLNISYCKSLTDTSIERIASSLSNLKKLKMDSVVNITDDGIKA 1742
Query: 368 LTSL---TGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG-------L 416
L+ + + L L G R I+D A Y+ F NL+ L + G +T AG+ L
Sbjct: 1743 LSEAPIASSIEDLSLVGCRKISDVSAQYILRFHNLKKLSLGGCLMTTAGVESIAAESFEL 1802
Query: 417 VSLNVSNS-RITSAGLRHLKPLKNL 440
V +++ N I A ++ P N+
Sbjct: 1803 VKISIRNCLNINPAAIKEKHPHMNI 1827
>gi|320170955|gb|EFW47854.1| hypothetical protein CAOG_05792 [Capsaspora owczarzaki ATCC 30864]
Length = 727
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 155/369 (42%), Gaps = 28/369 (7%)
Query: 85 SLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCT 142
SLD+N I + GL+ LT LS N IT+ F G+ L L L + T
Sbjct: 74 SLDYNLITSIPA---DAFTGLTALTYLSLYAN-PITSIPAGTFTGVTALTYLSLSSNQIT 129
Query: 143 RIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKG 202
I G L L SL + + N IT + LT L L + +++T A+ G
Sbjct: 130 SIPAGA--FTDLTALRSLFL-YANLITSISANAFTSLTALTYLHLYGNQITSISNAF-TG 185
Query: 203 LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
L LT L+L +T+ ++ + L +L L+L Q++ + F+ + +L L L N
Sbjct: 186 LTALTELHLYNNHITSISANAFTDLTALTELSLISNQITSIPADTFTGLTALTYLYLNSN 245
Query: 263 EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG 322
+IT GLT L L+L+S I T L L L + + S +G
Sbjct: 246 QITSIPADTFTGLTALTYLSLNSNSITSIAATAFTDLTALTYLSFNSNSITSISANAFAG 305
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
LT L + S I+ S AGL++L L+L + QIT T +T LT+L L
Sbjct: 306 LTALTYLFFSSNLITSISANAFAGLTALTYLSLGSNQITSIPAGTFTGVTALTYLSLDSN 365
Query: 383 RITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRS 442
+IT A T GLT L L + ++ITS L L
Sbjct: 366 QITSIPAD------------------TFTGLTALTYLYLGTNQITSLPSSSFTNLTALTY 407
Query: 443 LTLESCKVT 451
L L+S +T
Sbjct: 408 LVLQSNPIT 416
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 151/369 (40%), Gaps = 30/369 (8%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVNLKGLMKLES 159
GL+ LT LS N IT+ AF GL L L L T I G G+ L
Sbjct: 64 FTGLTALTFLSLDYN-LITSIPADAFTGLTALTYLSLYANPITSIPAG--TFTGVTALTY 120
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
L++ N IT + LT L+SL + + +T L LT L+L G +T+
Sbjct: 121 LSLS-SNQITSIPAGAFTDLTALRSLFLYANLITSISANAFTSLTALTYLHLYGNQITSI 179
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
++ + L +L L+L ++ F+ + +L L+L N+IT GLT L
Sbjct: 180 S-NAFTGLTALTELHLYNNHITSISANAFTDLTALTELSLISNQITSIPADTFTGLTALT 238
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
L L+S I TGL L L L+ + S + LT L ++ + I+
Sbjct: 239 YLYLNSNQITSIPADTFTGLTALTYLSLNSNSITSIAATAFTDLTALTYLSFNSNSITSI 298
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
S AGL++L L + IT A LT LT+L L +IT
Sbjct: 299 SANAFAGLTALTYLFFSSNLITSISANAFAGLTALTYLSLGSNQIT-------------- 344
Query: 400 SLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
I G T G+T L L++ +++ITS L L L L + N I L
Sbjct: 345 --SIPAGTFT--GVTALTYLSLDSNQITSIPADTFTGLTALTYLYLGT-----NQITSLP 395
Query: 460 SRDLPNLVS 468
S NL +
Sbjct: 396 SSSFTNLTA 404
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 123/295 (41%), Gaps = 11/295 (3%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N IT +GLT L L + + +T GL LT L+L P+T+ + +
Sbjct: 54 NPITSIPTNAFTGLTALTFLSLDYNLITSIPADAFTGLTALTYLSLYANPITSIPAGTFT 113
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
+ +L YL+L+ Q++ F+ + +L+ L L N IT LT L L+L
Sbjct: 114 GVTALTYLSLSSNQITSIPAGAFTDLTALRSLFLYANLITSISANAFTSLTALTYLHLYG 173
Query: 286 CGIG--DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
I LT L L T + ++ L+ LT L I+ T I +
Sbjct: 174 NQITSISNAFTGLTALTELHLYNNHITSISANAFTDLTALTELSLISNQITSIPADTFT- 232
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
GL++L L L++ QIT T LT LT+L L IT A + L L
Sbjct: 233 --GLTALTYLYLNSNQITSIPADTFTGLTALTYLSLNSNSITSIAATAFTDLTALTYLSF 290
Query: 404 CGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
+T AGLT L L S++ ITS L L L+L S ++T+
Sbjct: 291 NSNSITSISANAFAGLTALTYLFFSSNLITSISANAFAGLTALTYLSLGSNQITS 345
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 96/226 (42%), Gaps = 7/226 (3%)
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L +N ++ F+ + +L L+L +N IT GLT L L+L + I
Sbjct: 49 LYINSNPITSIPTNAFTGLTALTFLSLDYNLITSIPADAFTGLTALTYLSLYANPITSIP 108
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
TG+ L L LS Q+ S + LT L S+ L I+ S L++L
Sbjct: 109 AGTFTGVTALTYLSLSSNQITSIPAGAFTDLTALRSLFLYANLITSISANAFTSLTALTY 168
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD-- 410
L+L QIT A T LT LT L L+ IT A + L L + +T
Sbjct: 169 LHLYGNQITSIS-NAFTGLTALTELHLYNNHITSISANAFTDLTALTELSLISNQITSIP 227
Query: 411 ----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
GLT L L +++++ITS L L L+L S +T+
Sbjct: 228 ADTFTGLTALTYLYLNSNQITSIPADTFTGLTALTYLSLNSNSITS 273
>gi|326487896|dbj|BAJ89787.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 661
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 143/488 (29%), Positives = 223/488 (45%), Gaps = 83/488 (17%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGS-DVTDSGLIHLKDCSNLQSLDFNFC 91
++ +CL + GV + ++ + + L +VDLS D L S L+ L+ C
Sbjct: 106 VRQVCLARASGVGWRGLEALVAACPRLEAVDLSHCVGAGDREAAALAAASGLRELNLEKC 165
Query: 92 IQISDGGLEHLR-GLSNLTSLSFRRNNAITAQGMKAFAGLI-NLVKLDLERCTRIHGGLV 149
+ ++D GL + G L +LSF+ I+ G+ +L LD+ + L
Sbjct: 166 LGVTDMGLAKVAVGCPRLETLSFKWCREISDIGVDLLVKKCRDLRSLDISYLKVSNESLR 225
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYL----KGL 203
++ L KLE L + C+CI D ++ LS G +L+S+ +S C+ VT G+A L L
Sbjct: 226 SISTLEKLEELAMVACSCIDDEGLELLSRGSNSLQSVDVSRCNHVTSQGLASLIDGHSFL 285
Query: 204 QKL------------------------TLLNLEGCPVTAACLDSLSALGS----LFYLNL 235
QKL T+L L+G V+++ LSA+G L + L
Sbjct: 286 QKLNAADSLHEIGQNFLSKLVTLKATLTVLRLDGFEVSSS---LLSAIGEGCTNLVEIGL 342
Query: 236 NRCQ-LSDDG-------CEKFSKIGSLKVLNLGFNE----ITDECLVHLKGLTNLESLNL 283
++C ++D+G C KI L NL N+ I D C + LE L L
Sbjct: 343 SKCNGVTDEGISSLVARCSYLRKI-DLTCCNLVTNDSLDSIADNCKM-------LECLRL 394
Query: 284 DSCG-IGDEGLVNLTGLC-NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG-ISDGS 340
+SC I ++GL + C NLK ++L+D V L HL+ + L + L + ISD
Sbjct: 395 ESCSSINEKGLERIASCCPNLKEIDLTDCGVNDEALHHLAKCSELLILKLGLSSSISDKG 454
Query: 341 LRKLAGLSSLKSLNLDARQ---ITDTGLAALTSLTGLTHLDL----FGARITDSGAAYLR 393
L ++ K + LD + ITD GLAAL + G + L + +ITDSG ++L
Sbjct: 455 LGFISSKCG-KLIELDLYRCSSITDDGLAALAN--GCKKIKLLNLCYCNKITDSGLSHLG 511
Query: 394 NFKNLRSLE------ICGGGLTDA--GLTGLVSLNVSNSR-ITSAGLRHLKPLK-NLRSL 443
+ L +LE I G G++ G LV L++ + +GL L NLR L
Sbjct: 512 ALEELTNLELRCLVRITGIGISSVVIGCKSLVELDLKRCYSVNDSGLWALARYALNLRQL 571
Query: 444 TLESCKVT 451
T+ C+VT
Sbjct: 572 TISYCQVT 579
>gi|224144082|ref|XP_002325179.1| predicted protein [Populus trichocarpa]
gi|222866613|gb|EEF03744.1| predicted protein [Populus trichocarpa]
Length = 66
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 53/61 (86%)
Query: 408 LTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLV 467
L + GLT LVSLNVSNS IT GLR+LKPLKNLRS++LESCKVTA+ IK+LQS +LPNLV
Sbjct: 6 LVNTGLTELVSLNVSNSLITIDGLRYLKPLKNLRSVSLESCKVTASGIKKLQSTELPNLV 65
Query: 468 S 468
S
Sbjct: 66 S 66
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA 226
+GLT L SL +S S +T G+ YLK L+ L ++LE C VTA+ + L +
Sbjct: 9 TGLTELVSLNVSNSLITIDGLRYLKPLKNLRSVSLESCKVTASGIKKLQS 58
>gi|84043372|ref|XP_951476.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348176|gb|AAQ15503.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62359981|gb|AAX80405.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei]
Length = 1393
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 165/358 (46%), Gaps = 38/358 (10%)
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD-MKPLSGLTNL 182
++A A ++ L KL L CT I G+ L L +L+ L++ N TD++ ++ L +
Sbjct: 477 VEALANILTLEKLSLHGCTDIDAGIGCLGNLPQLKVLDLSGTN--TDNESLRSLCLSQTM 534
Query: 183 KSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
SL +S C K+T+ ++++ L+ L LNL C A ++L L L L+ ++
Sbjct: 535 VSLNLSHCWKMTN--VSHISSLEALNELNLSNCIRINAGWEALEKLQQLHVAILSNTHIT 592
Query: 242 DDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCGIGDEGLV---NLT 297
D G FSK +L L+L F N++ D + L +T LE LNLDSC +GL L
Sbjct: 593 DRGISYFSKCKNLVTLDLSFCNKLLD--VTTLSNITTLEELNLDSCSNIRKGLSVLGELP 650
Query: 298 GLC--NLKCLELSDTQVGSSG------------------LRHLSGLTNLESINLSFTGIS 337
LC N+K ++L D+ +GS G + LS L LE +NL +
Sbjct: 651 RLCVLNIKGVQLEDSVIGSLGNGKSLVRLSLENCKGFGDVTPLSNLVTLEELNLHYCDKV 710
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAAL-TSLTGLTHLDL-FGARITD-SGAAYLRN 394
+ L L L+ L+L Q+ D L + TS L L+ +IT S A L
Sbjct: 711 TSGMGTLGRLPQLRVLDLGRTQVDDNSLENICTSSIPLVSLNFSHCKKITSISAIASLTA 770
Query: 395 FKNLRSLEIC---GGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
+ L C G L L +SN+RI +RH+ K+L +L L CK
Sbjct: 771 LEELNIDNCCNVTSGWNVFGTLHQLRVATLSNTRINDEKIRHVSECKSLNTLNLAFCK 828
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 211/498 (42%), Gaps = 71/498 (14%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC 91
AL +L L +N W + Q L LS + +TD G+ + C NL +LD +FC
Sbjct: 556 ALNELNLSNCIRINAGWEALEKLQ--QLHVAILSNTHITDRGISYFSKCKNLVTLDLSFC 613
Query: 92 IQISD-------GGLEHL---------RGLSNLTSLSFRRNNAITAQGMKAFAGLI---- 131
++ D LE L +GLS L L R + +G++ +I
Sbjct: 614 NKLLDVTTLSNITTLEELNLDSCSNIRKGLSVLGELP--RLCVLNIKGVQLEDSVIGSLG 671
Query: 132 ---NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
+LV+L LE C + G + L L+ LE LN+ +C+ +T S M L L L+ L +
Sbjct: 672 NGKSLVRLSLENC-KGFGDVTPLSNLVTLEELNLHYCDKVT-SGMGTLGRLPQLRVLDLG 729
Query: 189 CSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEK 247
++V D+ + + L LN C + + ++++L +L LN++ C G
Sbjct: 730 RTQVDDNSLENICTSSIPLVSLNFSHCKKITS-ISAIASLTALEELNIDNCCNVTSGWNV 788
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL-----------------------NLD 284
F + L+V L I DE + H+ +L +L NLD
Sbjct: 789 FGTLHQLRVATLSNTRINDEKIRHVSECKSLNTLNLAFCKDITDVTALSKITMLEELNLD 848
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG--SLR 342
C +G+ L L + L + + +G + S L N +S+ S G S++
Sbjct: 849 CCPNIRKGIETLGTLPKARILSMKECYMGDGYAQQCSILGNSKSLVKLNLERSRGRISVK 908
Query: 343 KLAGLSSLKSLNLD-ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF---KNL 398
L+ +++L+ L LD AR++ + S + L L + + TD +N K+L
Sbjct: 909 ALSDIATLEELVLDHAREV-----CCIPSFSCLPRLRVLNLKYTDINGDATKNISESKSL 963
Query: 399 RSLEICG-GGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAN 453
RSL + +TD + L+ L LNV+ G L L LR L +TA
Sbjct: 964 RSLNLSHCKWVTDISVLSSLSTLEELNVNCCNAIRKGWESLGKLPLLRVAILSDTNITAK 1023
Query: 454 DIKRLQS-RDLPNLVSFR 470
DI L S + L L FR
Sbjct: 1024 DIACLSSCKKLVKLKFFR 1041
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 183/406 (45%), Gaps = 42/406 (10%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
++L +D+ ++ + +L+SL+ + C ++D +S L+SLS
Sbjct: 942 LNLKYTDINGDATKNISESKSLRSLNLSHCKWVTD--------ISVLSSLS--------- 984
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
L +L++ C I G +L G + L + I IT D+ LS
Sbjct: 985 ----------TLEELNVNCCNAIRKGWESL-GKLPLLRVAILSDTNITAKDIACLSSCKK 1033
Query: 182 LKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
L L+ C K++D + Y +Q L L ++ C L++L L L +L+L
Sbjct: 1034 LVKLKFFRCKKLSDVTVVY--KIQSLEELIVKNCSGGLKGLNALGTLPRLRFLHLRNVSG 1091
Query: 241 SDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
SD E SL LN+ E+TD L +T+LE L+L CG EG+ L L
Sbjct: 1092 SDISVESIGTSKSLVRLNIETREELTDT--TPLSNITSLEELSLRKCGNNLEGVGTLGKL 1149
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG-ISDGSLRKLAGLSSLKSLNLDAR 358
L+ L L +++ S L ++ ++ S+NL+ + ++D S ++ L++L+ LNL
Sbjct: 1150 PRLRSLYLGLSRINDSTLYYICLSRSITSLNLASSWKLTDIS--HISKLTALEELNLRGC 1207
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDS-GAAYLRNFKNLRSLEICGGGLTDAG----L 413
+G AL+ L L L+L R+T G Y+R K+L +L + +TDA +
Sbjct: 1208 YPITSGWEALSELPRLRVLNLESTRVTTRYGGYYIRRCKSLVTLSLESCDMTDASCLANI 1267
Query: 414 TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
L L++ + G L L LR L L +T D++ +Q
Sbjct: 1268 KTLEELHIGRCKELRWGFSPLFTLPRLRILNLICSLITDEDLREIQ 1313
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 169/380 (44%), Gaps = 42/380 (11%)
Query: 101 HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL 160
HL + L L+ +T ++ + L NL+ L+L + + KL L
Sbjct: 196 HLFSVGTLEELAITDTMQLT--NIRGISRLTNLMCLELNSTDIDDTCIGEISACAKLSKL 253
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
++ CN ITD+ P+S L L+ L + SC +T GI L L +L +L+L G PV
Sbjct: 254 SVSECNNITDA--TPISQLAALEELNLNSCYHIT-KGIGTLGMLLRLRMLDLSGVPVEDN 310
Query: 220 CLDSLSALGSLFYLNLNRC-QLSD---------------DGCEKFSK-------IGSLKV 256
CL L GSL LN++ C QL+D +GC + ++ + L+V
Sbjct: 311 CLKDLCDCGSLERLNISYCIQLTDINPLSNATAIEELNLNGCRRITRGIDVVWALPKLRV 370
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSS 315
++ +++ L + +L ++LD+C G GD L L+ + L+ L + S
Sbjct: 371 FHMKDVHLSEPSLDSVGTGGSLVKVSLDNCAGFGDMSL--LSSIVTLEELNIQKCADIIS 428
Query: 316 GLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD-TGLAALTSLTGL 374
G+ L L L +N+ IS + SL LN+++ IT + + AL ++ L
Sbjct: 429 GVGCLGTLPYLRVLNIKEVHISSLDFTGIGASKSLLQLNMES--ITGLSNVEALANILTL 486
Query: 375 THLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL------VSLNVSNSRITS 428
L L G D+G L N L+ L++ G + L L VSLN+S+
Sbjct: 487 EKLSLHGCTDIDAGIGCLGNLPQLKVLDLSGTNTDNESLRSLCLSQTMVSLNLSHC-WKM 545
Query: 429 AGLRHLKPLKNLRSLTLESC 448
+ H+ L+ L L L +C
Sbjct: 546 TNVSHISSLEALNELNLSNC 565
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 182/409 (44%), Gaps = 40/409 (9%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ ++L+ ++L+ +D+ D+ + + C+ L L + C I+D + L+ L L+
Sbjct: 221 SRLTNLMCLELNSTDIDDTCIGEISACAKLSKLSVSECNNITDAT--PISQLAALEELNL 278
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
IT +G+ L+ L LDL L +L LE LNI +C I +D+
Sbjct: 279 NSCYHIT-KGIGTLGMLLRLRMLDLSGVPVEDNCLKDLCDCGSLERLNISYC--IQLTDI 335
Query: 174 KPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
PLS T ++ L ++ C ++T GI + L KL + +++ ++ LDS+ GSL
Sbjct: 336 NPLSNATAIEELNLNGCRRIT-RGIDVVWALPKLRVFHMKDVHLSEPSLDSVGTGGSLVK 394
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
++L+ C GF +++ L + LE LN+ C G
Sbjct: 395 VSLDNCA--------------------GFGDMS-----LLSSIVTLEELNIQKCADIISG 429
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAGLSSLK 351
+ L L L+ L + + + S + +L +N+ S TG+S+ + LA + +L+
Sbjct: 430 VGCLGTLPYLRVLNIKEVHISSLDFTGIGASKSLLQLNMESITGLSN--VEALANILTLE 487
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG-GGLTD 410
L+L D G+ L +L L LDL G + L + + SL + +T+
Sbjct: 488 KLSLHGCTDIDAGIGCLGNLPQLKVLDLSGTNTDNESLRSLCLSQTMVSLNLSHCWKMTN 547
Query: 411 ----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 455
+ L L LN+SN +AG L+ L+ L L + +T I
Sbjct: 548 VSHISSLEALNELNLSNCIRINAGWEALEKLQQLHVAILSNTHITDRGI 596
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 143/320 (44%), Gaps = 39/320 (12%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISD-------------------GGLEHLRG 104
LS +++T + L C L L F C ++SD GGL+ L
Sbjct: 1015 LSDTNITAKDIACLSSCKKLVKLKFFRCKKLSDVTVVYKIQSLEELIVKNCSGGLKGLNA 1074
Query: 105 LSNLTSLSFR--RNNAITAQGMKAFAGLINLVKLDLERCTRIH-GGLVNLKGLMKLESLN 161
L L L F RN + + +++ +LV+L++E TR L + LE L+
Sbjct: 1075 LGTLPRLRFLHLRNVSGSDISVESIGTSKSLVRLNIE--TREELTDTTPLSNITSLEELS 1132
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 221
++ C + + L L L+SL + S++ DS + Y+ + +T LNL +
Sbjct: 1133 LRKCGNNLEG-VGTLGKLPRLRSLYLGLSRINDSTLYYICLSRSITSLNLAS-SWKLTDI 1190
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTNLES 280
+S L +L LNL C G E S++ L+VLNL +T +++ +L +
Sbjct: 1191 SHISKLTALEELNLRGCYPITSGWEALSELPRLRVLNLESTRVTTRYGGYYIRRCKSLVT 1250
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSS-----GLRHLSGLTNLESINLSFTG 335
L+L+SC + D + L N+K LE + +G G L L L +NL +
Sbjct: 1251 LSLESCDMTDA-----SCLANIKTLE--ELHIGRCKELRWGFSPLFTLPRLRILNLICSL 1303
Query: 336 ISDGSLRKLAGLSSLKSLNL 355
I+D LR++ +++ LNL
Sbjct: 1304 ITDEDLREIQPPHTIEELNL 1323
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 16/191 (8%)
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDS-GIAYLKGLQKLTL 208
++ L LE LN++ C IT S + LS L L+ L + ++VT G Y++ + L
Sbjct: 1192 HISKLTALEELNLRGCYPIT-SGWEALSELPRLRVLNLESTRVTTRYGGYYIRRCKSLVT 1250
Query: 209 LNLEGCPVT-AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
L+LE C +T A+CL ++ L L ++ RC+ G + L++LNL + ITDE
Sbjct: 1251 LSLESCDMTDASCLANIKTLEEL---HIGRCKELRWGFSPLFTLPRLRILNLICSLITDE 1307
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL------ELSDTQVGSSGLRHLS 321
L ++ +E LNL C E L ++T L +K + + D + + G R L
Sbjct: 1308 DLREIQPPHTIEELNLSYC----EELNDITPLGRIKSIKKLHLRQSHDARRPTEGFRSLL 1363
Query: 322 GLTNLESINLS 332
L L ++L+
Sbjct: 1364 ELPCLSWVDLN 1374
>gi|290976088|ref|XP_002670773.1| predicted protein [Naegleria gruberi]
gi|284084335|gb|EFC38029.1| predicted protein [Naegleria gruberi]
Length = 681
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 126/254 (49%), Gaps = 25/254 (9%)
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV 216
L L++ +C I+D ++ +S + LK L +S ++ + + +K +++LT+L++ +
Sbjct: 415 LRRLHVVFCK-ISDREISVISQMKQLKELNVSGNRFSFESVCKIKDMKQLTILDMSYTKL 473
Query: 217 TAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT 276
++ +S + +L L +N L G E +++ L+ L +G N I DE + + +
Sbjct: 474 KCLDVEVVSGMRNLTSLRINDNDLGIQGAELIAQLDQLRELFIGSNNIGDEGMYSISHMK 533
Query: 277 NLESLNLDSCGIGDEGL---------------VNLTG---------LCNLKCLELSDTQV 312
NL L++ S GIG+EG NL G L L L +++ ++
Sbjct: 534 NLTKLDVSSNGIGEEGANSISQLKGLTFINVGFNLIGQQGAESIGELEQLTTLLINNCEI 593
Query: 313 GSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT 372
G +G + +S + + +++S I D ++ L L L ++ +ITD GL A+T +
Sbjct: 594 GPTGAKFISKMQRVTELDISLNDIQDEGAHYISELEKLSILYVNNNEITDEGLKAITQMK 653
Query: 373 GLTHLDLFGARITD 386
L LD+ G +I+D
Sbjct: 654 NLQLLDVSGNKISD 667
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 125/275 (45%), Gaps = 9/275 (3%)
Query: 186 QISCSKVTDSGIAYLKGL---QKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
Q V DS K + + L L++ C ++ + +S + L LN++ + S
Sbjct: 392 QTKSFSVVDSAFDRSKSIARCEHLRRLHVVFCKISDREISVISQMKQLKELNVSGNRFSF 451
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNL 302
+ K + L +L++ + ++ + + G+ NL SL ++ +G +G + L L
Sbjct: 452 ESVCKIKDMKQLTILDMSYTKLKCLDVEVVSGMRNLTSLRINDNDLGIQGAELIAQLDQL 511
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
+ L + +G G+ +S + NL +++S GI + ++ L L +N+ I
Sbjct: 512 RELFIGSNNIGDEGMYSISHMKNLTKLDVSSNGIGEEGANSISQLKGLTFINVGFNLIGQ 571
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGL 416
G ++ L LT L + I +GA ++ + + L+I + D G L L
Sbjct: 572 QGAESIGELEQLTTLLINNCEIGPTGAKFISKMQRVTELDISLNDIQDEGAHYISELEKL 631
Query: 417 VSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
L V+N+ IT GL+ + +KNL+ L + K++
Sbjct: 632 SILYVNNNEITDEGLKAITQMKNLQLLDVSGNKIS 666
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 118/252 (46%), Gaps = 12/252 (4%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNF----CIQISDGGL 99
++D+ + VI SQ L +++SG+ + + +KD L LD ++ C+ +
Sbjct: 425 ISDREISVI-SQMKQLKELNVSGNRFSFESVCKIKDMKQLTILDMSYTKLKCLDV----- 478
Query: 100 EHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES 159
E + G+ NLTSL +N + QG + A L L +L + G+ ++ + L
Sbjct: 479 EVVSGMRNLTSLRIN-DNDLGIQGAELIAQLDQLRELFIGSNNIGDEGMYSISHMKNLTK 537
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
L++ N I + +S L L + + + + G + L++LT L + C +
Sbjct: 538 LDVS-SNGIGEEGANSISQLKGLTFINVGFNLIGQQGAESIGELEQLTTLLINNCEIGPT 596
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
+S + + L+++ + D+G S++ L +L + NEITDE L + + NL+
Sbjct: 597 GAKFISKMQRVTELDISLNDIQDEGAHYISELEKLSILYVNNNEITDEGLKAITQMKNLQ 656
Query: 280 SLNLDSCGIGDE 291
L++ I DE
Sbjct: 657 LLDVSGNKISDE 668
>gi|290972682|ref|XP_002669080.1| predicted protein [Naegleria gruberi]
gi|284082622|gb|EFC36336.1| predicted protein [Naegleria gruberi]
Length = 434
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 188/424 (44%), Gaps = 29/424 (6%)
Query: 67 SDVTDSGLIHLKDCS-------------NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S + SG+ HLK + L L+ N+ ++ D ++ + L NLT L
Sbjct: 18 SKIILSGMKHLKILAASGSEIDKFSRLDQLTELNVNWN-RLKDEDVKSIGNLKNLTLLEL 76
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
N I+ MK + L L KL + + + G+ ++ L KL LNI N IT +
Sbjct: 77 S-GNEISKNSMKFISQLSELTKLSVGLNSIENEGINSIINLSKLTCLNIINAN-ITSEGV 134
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K + L+NL L IS + + G Y+ L L +L + S+ + L L
Sbjct: 135 KLIGKLSNLTILDISGNLIGAEGGQYIGELNNLKILVASDNELGVFGAKSIGEMNQLTSL 194
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
L + ++G + S++ L L+LG NEI +E L L L +L++ S I D
Sbjct: 195 CLIGNSIGNEGAKYISQLTQLTDLDLGRNEIGNEGFKLLTKLEKLTNLDMVSNNISDLSS 254
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
+ GL N CL++ ++ +G+R++ L L ++ L I+ + L+ + L +L
Sbjct: 255 IGQLGLLN--CLDVRKNKIEDTGIRNICQLGGLNALRLCGNPITSEGAKILSEMVQLTNL 312
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG- 412
++ I D G + LT L +LD+ RIT +G ++ L SL+I + D G
Sbjct: 313 SISETHIDDEGAKFIAQLTTLKYLDISTKRITANGVKFICQLSKLISLDINWNNIGDEGV 372
Query: 413 --LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRD---LPNLV 467
++ + L N+ + GL K L + LT+ K IKR+ L N+
Sbjct: 373 LYISRMQQLETLNAVYCNIGLEGAKLLSEMEQLTVLDVK-----IKRIPGEGIQLLENIA 427
Query: 468 SFRP 471
F+
Sbjct: 428 RFKS 431
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 167/365 (45%), Gaps = 27/365 (7%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
++LSG++++ + + + S L L I + G+ + LS LT L+ N IT+
Sbjct: 74 LELSGNEISKNSMKFISQLSELTKLSVGLN-SIENEGINSIINLSKLTCLNIINAN-ITS 131
Query: 122 QGMKAFAGLINLVKLDLE------RCTRIHGGLVNLK------------GLMKLESLN-- 161
+G+K L NL LD+ + G L NLK G + +N
Sbjct: 132 EGVKLIGKLSNLTILDISGNLIGAEGGQYIGELNNLKILVASDNELGVFGAKSIGEMNQL 191
Query: 162 IKWC---NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
C N I + K +S LT L L + +++ + G L L+KLT NL+
Sbjct: 192 TSLCLIGNSIGNEGAKYISQLTQLTDLDLGRNEIGNEGFKLLTKLEKLT--NLDMVSNNI 249
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
+ L S+ LG L L++ + ++ D G ++G L L L N IT E L + L
Sbjct: 250 SDLSSIGQLGLLNCLDVRKNKIEDTGIRNICQLGGLNALRLCGNPITSEGAKILSEMVQL 309
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
+L++ I DEG + L LK L++S ++ ++G++ + L+ L S+++++ I D
Sbjct: 310 TNLSISETHIDDEGAKFIAQLTTLKYLDISTKRITANGVKFICQLSKLISLDINWNNIGD 369
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 398
+ ++ + L++LN I G L+ + LT LD+ RI G L N
Sbjct: 370 EGVLYISRMQQLETLNAVYCNIGLEGAKLLSEMEQLTVLDVKIKRIPGEGIQLLENIARF 429
Query: 399 RSLEI 403
+SL +
Sbjct: 430 KSLVV 434
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 25/218 (11%)
Query: 253 SLKVLNLGFNEITDECLVHLKGLTNLE-------------------SLNLDSCGIGDEGL 293
+L LN+ +N+I+++ + L G+ +L+ LN++ + DE +
Sbjct: 3 NLTYLNIDWNKISEKSKIILSGMKHLKILAASGSEIDKFSRLDQLTELNVNWNRLKDEDV 62
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
++ L NL LELS ++ + ++ +S L+ L +++ I + + + LS L L
Sbjct: 63 KSIGNLKNLTLLELSGNEISKNSMKFISQLSELTKLSVGLNSIENEGINSIINLSKLTCL 122
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL-----EICGGGL 408
N+ IT G+ + L+ LT LD+ G I G Y+ NL+ L E+ G
Sbjct: 123 NIINANITSEGVKLIGKLSNLTILDISGNLIGAEGGQYIGELNNLKILVASDNELGVFGA 182
Query: 409 TDAG-LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
G + L SL + + I + G +++ L L L L
Sbjct: 183 KSIGEMNQLTSLCLIGNSIGNEGAKYISQLTQLTDLDL 220
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 11/176 (6%)
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
+ NL LN+D I ++ + L+G+ +LK L S +++ S L L +N+++
Sbjct: 1 MKNLTYLNIDWNKISEKSKIILSGMKHLKILAASGSEI-----DKFSRLDQLTELNVNWN 55
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
+ D ++ + L +L L L +I+ + ++ L+ LT L + I + G + N
Sbjct: 56 RLKDEDVKSIGNLKNLTLLELSGNEISKNSMKFISQLSELTKLSVGLNSIENEGINSIIN 115
Query: 395 FKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
L L I +T G L+ L L++S + I + G +++ L NL+ L
Sbjct: 116 LSKLTCLNIINANITSEGVKLIGKLSNLTILDISGNLIGAEGGQYIGELNNLKILV 171
>gi|290994540|ref|XP_002679890.1| predicted protein [Naegleria gruberi]
gi|284093508|gb|EFC47146.1| predicted protein [Naegleria gruberi]
Length = 293
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 118/237 (49%)
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K +S + L SL I + + G + +++LT L++ G + + S+S + L L
Sbjct: 44 KLISEMKQLTSLNIFKNGIGVEGAKLISEMKQLTSLDISGNLIYDEGVKSISEMKQLTSL 103
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
++++ ++ +G + S + L LN+ NEI+DE + + L SL + GI D+G
Sbjct: 104 DISKNEIGVEGAKLISGMKQLTSLNISKNEISDEGAKLISEMKQLTSLTIYKSGIDDKGA 163
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
L+ + L L++S +G G + +S + L S+++S I D ++G+ L SL
Sbjct: 164 KYLSEIKQLTSLDISSNPMGVEGAKFISEMKQLTSLDISNNLIYDEGAEFISGMKQLTSL 223
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
N+ I D G ++ + LT LD+ I D GA ++ K L SL + ++D
Sbjct: 224 NISNNIILDEGAKLISEMKQLTSLDICYNEIGDEGAKFISGMKQLTSLYVYANRISD 280
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 133/279 (47%), Gaps = 6/279 (2%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+ L SL I +++ G ++ +++LT L++ + +S + L LN+ +
Sbjct: 1 MKQLTSLSIGVNEIGVEGGKFISEIKQLTSLDISDNQIGVEGAKLISEMKQLTSLNIFKN 60
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
+ +G + S++ L L++ N I DE + + + L SL++ IG EG ++G
Sbjct: 61 GIGVEGAKLISEMKQLTSLDISGNLIYDEGVKSISEMKQLTSLDISKNEIGVEGAKLISG 120
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
+ L L +S ++ G + +S + L S+ + +GI D + L+ + L SL++ +
Sbjct: 121 MKQLTSLNISKNEISDEGAKLISEMKQLTSLTIYKSGIDDKGAKYLSEIKQLTSLDISSN 180
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------ 412
+ G ++ + LT LD+ I D GA ++ K L SL I + D G
Sbjct: 181 PMGVEGAKFISEMKQLTSLDISNNLIYDEGAEFISGMKQLTSLNISNNIILDEGAKLISE 240
Query: 413 LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
+ L SL++ + I G + + +K L SL + + +++
Sbjct: 241 MKQLTSLDICYNEIGDEGAKFISGMKQLTSLYVYANRIS 279
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 115/239 (48%), Gaps = 27/239 (11%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L S+D+SG+ + D G+ + + L SLD + +I G + + G+ LTSL+
Sbjct: 71 SEMKQLTSLDISGNLIYDEGVKSISEMKQLTSLDISKN-EIGVEGAKLISGMKQLTSLNI 129
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
+N I+ +G K LI+ +K +L SL I + + I D
Sbjct: 130 SKNE-ISDEGAK----LISEMK--------------------QLTSLTI-YKSGIDDKGA 163
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K LS + L SL IS + + G ++ +++LT L++ + + +S + L L
Sbjct: 164 KYLSEIKQLTSLDISSNPMGVEGAKFISEMKQLTSLDISNNLIYDEGAEFISGMKQLTSL 223
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
N++ + D+G + S++ L L++ +NEI DE + G+ L SL + + I DE
Sbjct: 224 NISNNIILDEGAKLISEMKQLTSLDICYNEIGDEGAKFISGMKQLTSLYVYANRISDEA 282
>gi|326201424|ref|ZP_08191295.1| Dockerin type 1 [Clostridium papyrosolvens DSM 2782]
gi|325988024|gb|EGD48849.1| Dockerin type 1 [Clostridium papyrosolvens DSM 2782]
Length = 1098
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 218/469 (46%), Gaps = 60/469 (12%)
Query: 10 IFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDV 69
I +L + + F D L+ + G +N D++ + SS+ S+ ++
Sbjct: 18 ILTQLFVHNAFADSDIVTFADPNLEAVVRG---AINKPTGDILKTDVSSITSIIAENKNI 74
Query: 70 TDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAG 129
+ L ++ +NL L + +ISD + L GL++L L+ ++N + A AG
Sbjct: 75 NN--LTGIECLTNLTMLSLSKN-KISD--VTPLAGLTSLKYLALYQSNI---SNINALAG 126
Query: 130 LINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISC 189
LINL LDL + + LK + KL L + W N +D+ LS LTNL+ LQ+ C
Sbjct: 127 LINLEYLDLGMNSV--SDISALKNMTKLTYLELSWNNI---TDISALSKLTNLQYLQLGC 181
Query: 190 SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS 249
+++ D I+ + L KL L+L ++ + LS L +L YL+LN +S+ +
Sbjct: 182 NRIVD--ISPISNLTKLKTLHLFYNRISD--ISGLSGLKTLTYLHLNSNNVSN--INPLN 235
Query: 250 KIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD-EGLVNLTGLCNLKCLELS 308
+ L L+LGFN+ITD + L LT + L+L I + L NLT L +LK LE +
Sbjct: 236 GLTMLSYLDLGFNKITD--ISALNKLTKITDLDLSYNKITNINVLSNLTSLNDLK-LENN 292
Query: 309 DTQVGSSGLRHLSGLT----NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT--D 362
S +S LT NLE I+ ++ +L S ++A QIT D
Sbjct: 293 PINNYSPITGIISKLTKKDFNLEPISFPDADLAKAVCHQLGKNSEDMIYKIEAPQITVLD 352
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVS 418
G + SL+G+ L NL+ L + G L + + LT L +
Sbjct: 353 AGNMEIKSLSGIEQL------------------CNLKDLYLAGNELDNINPISALTSLEA 394
Query: 419 LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA----NDIKRLQSRDL 463
LN+ ++I+ L L+ L NL+ L L K++ +D+ L++ DL
Sbjct: 395 LNLEKNQISD--LNVLRNLHNLKYLILRDNKISDITPLSDLSSLKTLDL 441
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 159/336 (47%), Gaps = 39/336 (11%)
Query: 71 DSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGL 130
D G+ + D S L+++ +++S + + LS LT+L + + + + + +
Sbjct: 134 DLGMNSVSDISALKNMTKLTYLELSWNNITDISALSKLTNLQYLQ---LGCNRIVDISPI 190
Query: 131 INLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCS 190
NL KL + + + ++ GL L++L N S++ PL+GLT L L + +
Sbjct: 191 SNLTKL--KTLHLFYNRISDISGLSGLKTLTYLHLNSNNVSNINPLNGLTMLSYLDLGFN 248
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
K+TD I+ L L K+T L+L +T ++ LS L S LN +L ++ +S
Sbjct: 249 KITD--ISALNKLTKITDLDLSYNKITN--INVLSNLTS-----LNDLKLENNPINNYSP 299
Query: 251 IGSL------KVLNLGFNEITD----ECLVHLKG------LTNLESLNLDSCGIGDEGLV 294
I + K NL D + + H G + +E+ + G+ +
Sbjct: 300 ITGIISKLTKKDFNLEPISFPDADLAKAVCHQLGKNSEDMIYKIEAPQITVLDAGNMEIK 359
Query: 295 NLTG---LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
+L+G LCNLK L L+ ++ + +S LT+LE++NL ISD L L L +LK
Sbjct: 360 SLSGIEQLCNLKDLYLAGNEL--DNINPISALTSLEALNLEKNQISD--LNVLRNLHNLK 415
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDS 387
L L +I+D + L+ L+ L LDL +T++
Sbjct: 416 YLILRDNKISD--ITPLSDLSSLKTLDLSYNSLTNT 449
>gi|326505700|dbj|BAJ95521.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 661
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 143/488 (29%), Positives = 223/488 (45%), Gaps = 83/488 (17%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGS-DVTDSGLIHLKDCSNLQSLDFNFC 91
++ +CL + GV + ++ + + L +VDLS D L S L+ L+ C
Sbjct: 106 VRQVCLARASGVGWRGLEALVAACPRLEAVDLSHCVGAGDREAAALAAASGLRELNLEKC 165
Query: 92 IQISDGGLEHLR-GLSNLTSLSFRRNNAITAQGMKAFAGLI-NLVKLDLERCTRIHGGLV 149
+ ++D GL + G L +LSF+ I+ G+ +L LD+ + L
Sbjct: 166 LGVTDMGLAKVAVGCPRLETLSFKWCREISDIGVDLLVKKCRDLRSLDISYLKVSNESLR 225
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYL----KGL 203
++ L KLE L + C+CI D ++ LS G +L+S+ +S C+ VT G+A L L
Sbjct: 226 SISTLEKLEELAMVACSCIDDEGLELLSRGSNSLQSVDVSRCNHVTSQGLASLIDGHSFL 285
Query: 204 QKL------------------------TLLNLEGCPVTAACLDSLSALGS----LFYLNL 235
QKL T+L L+G V+++ LSA+G L + L
Sbjct: 286 QKLNAADSLHEIGQNFLSKLVTLKATLTVLRLDGFEVSSS---LLSAIGEGCTNLVEIGL 342
Query: 236 NRCQ-LSDDG-------CEKFSKIGSLKVLNLGFNE----ITDECLVHLKGLTNLESLNL 283
++C ++D+G C KI L NL N+ I D C + LE L L
Sbjct: 343 SKCNGVTDEGISSLVARCSYLRKI-DLTCCNLVTNDSLDSIADNCKM-------LECLRL 394
Query: 284 DSCG-IGDEGLVNLTGLC-NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG-ISDGS 340
+SC I ++GL + C NLK ++L+D V L HL+ + L + L + ISD
Sbjct: 395 ESCSSINEKGLERIASCCPNLKEIDLTDCGVNDEALHHLAKCSELLILKLGLSSSISDKG 454
Query: 341 LRKLAGLSSLKSLNLDARQ---ITDTGLAALTSLTGLTHLDL----FGARITDSGAAYLR 393
L ++ K + LD + ITD GLAAL + G + L + +ITDSG ++L
Sbjct: 455 LGFISSKCG-KLIELDLYRCSSITDDGLAALAN--GCKKIKLLNLCYCNKITDSGLSHLG 511
Query: 394 NFKNLRSLE------ICGGGLTDA--GLTGLVSLNVSNSR-ITSAGLRHLKPLK-NLRSL 443
+ L +LE I G G++ G LV L++ + +GL L NLR L
Sbjct: 512 ALEELTNLELRCLVRITGIGISSVVIGCKSLVELDLKRCYSVDDSGLWALARYALNLRQL 571
Query: 444 TLESCKVT 451
T+ C+VT
Sbjct: 572 TISYCQVT 579
>gi|290972196|ref|XP_002668843.1| predicted protein [Naegleria gruberi]
gi|284082373|gb|EFC36099.1| predicted protein [Naegleria gruberi]
Length = 348
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 115/234 (49%), Gaps = 22/234 (9%)
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNL 302
+ + SK+ +LK LN+ N I +E L+ + L NL +LN+++ IGDEG+ +++ L NL
Sbjct: 8 NDVQDISKLVNLKTLNISINNIGNEGLIIVCNLINLTNLNIENNDIGDEGVQDISKLVNL 67
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTG----------------ISDGSLRKLAG 346
L + + S G + +S LTNL S+N++ I + ++ +
Sbjct: 68 TNLNIKSNALRSKGAQEISKLTNLTSLNVAENNVMLSEKNLSRNNITHQIENDGIKSIFN 127
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG 406
L +L +LN+ I D G+ ++ L LT+LD+ +I D G + N NL +L I
Sbjct: 128 LINLTNLNIQNNDIGDEGVQDISKLINLTNLDIGNNKIRDEGIKSIFNLINLTNLNIQNN 187
Query: 407 GLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAND 454
+ D G L L +L++ ++I G + + L NL L + + N+
Sbjct: 188 DIGDEGVQDISKLINLTNLDICQTKIGDNGAKEICKLINLTKLVCWNTDIATNN 241
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 120/232 (51%), Gaps = 18/232 (7%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
++ + L NL +L+ NN I +G+ LINL L++E G+ ++ L+ L
Sbjct: 10 VQDISKLVNLKTLNISINN-IGNEGLIIVCNLINLTNLNIENNDIGDEGVQDISKLVNLT 68
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
+LNIK N + + +S LTNL SL ++ + V L+ NL +T
Sbjct: 69 NLNIK-SNALRSKGAQEISKLTNLTSLNVAENNVM------------LSEKNLSRNNITH 115
Query: 219 AC----LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG 274
+ S+ L +L LN+ + D+G + SK+ +L L++G N+I DE + +
Sbjct: 116 QIENDGIKSIFNLINLTNLNIQNNDIGDEGVQDISKLINLTNLDIGNNKIRDEGIKSIFN 175
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
L NL +LN+ + IGDEG+ +++ L NL L++ T++G +G + + L NL
Sbjct: 176 LINLTNLNIQNNDIGDEGVQDISKLINLTNLDICQTKIGDNGAKEICKLINL 227
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 23/174 (13%)
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA 366
+ + ++G+ ++ +S L NL+++N+S I + L + L +L +LN++ I D G+
Sbjct: 1 MENNKIGND-VQDISKLVNLKTLNISINNIGNEGLIIVCNLINLTNLNIENNDIGDEGVQ 59
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGG--LTDAGLT---------- 414
++ L LT+L++ + GA + NL SL + L++ L+
Sbjct: 60 DISKLVNLTNLNIKSNALRSKGAQEISKLTNLTSLNVAENNVMLSEKNLSRNNITHQIEN 119
Query: 415 ----------GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
L +LN+ N+ I G++ + L NL +L + + K+ IK +
Sbjct: 120 DGIKSIFNLINLTNLNIQNNDIGDEGVQDISKLINLTNLDIGNNKIRDEGIKSI 173
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 66 GSDVTD-SGLIHLKDCSNLQSLDFNFCIQ-ISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
G+DV D S L++LK N I I + GL + L NLT+L+ NN I +G
Sbjct: 7 GNDVQDISKLVNLKT--------LNISINNIGNEGLIIVCNLINLTNLNIE-NNDIGDEG 57
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNC---------------I 168
++ + L+NL L+++ G + L L SLN+ N I
Sbjct: 58 VQDISKLVNLTNLNIKSNALRSKGAQEISKLTNLTSLNVAENNVMLSEKNLSRNNITHQI 117
Query: 169 TDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG 228
+ +K + L NL +L I + + D G+ + L LT L++ + + S+ L
Sbjct: 118 ENDGIKSIFNLINLTNLNIQNNDIGDEGVQDISKLINLTNLDIGNNKIRDEGIKSIFNLI 177
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
+L LN+ + D+G + SK+ +L L++
Sbjct: 178 NLTNLNIQNNDIGDEGVQDISKLINLTNLDI 208
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
+L ++++ +D+ D G+ + NL +LD +I D G++ + L NLT+L+ +NN
Sbjct: 130 NLTNLNIQNNDIGDEGVQDISKLINLTNLDIGNN-KIRDEGIKSIFNLINLTNLNI-QNN 187
Query: 118 AITAQGMKAFAGLINLVKLDL 138
I +G++ + LINL LD+
Sbjct: 188 DIGDEGVQDISKLINLTNLDI 208
>gi|290979547|ref|XP_002672495.1| predicted protein [Naegleria gruberi]
gi|284086072|gb|EFC39751.1| predicted protein [Naegleria gruberi]
Length = 665
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 24/285 (8%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
IT ++ ++ L + + I+ ++ D G + + +++LT L++ T + + ++
Sbjct: 398 ITHEVLQNITKLEKVNYVDIAAIRIGDEGASMIGQMKQLTYLDI---SFTGISYNGMRSI 454
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
G L NL + S D E +S + V +HL+ L L L++
Sbjct: 455 GQL--TNLTQLIFSSDDYENYSAPKGVTVA------------IHLRNLKKLTHLDITYNE 500
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
IGDEG ++ L NL LE+ + Q+ + G + +S L NL +N+S + S++ L L
Sbjct: 501 IGDEGSQFISELLNLTYLEMPNNQLRNEGFKMISKLENLTHLNISNNDFNCESMKHLCEL 560
Query: 348 SSLKSLNLDARQITDTGLAALTS-LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG 406
+L SL IT + + + L LT LDL I + GA Y+ K L+SL++
Sbjct: 561 KNLTSLEAFNTGITSNDVKLIANHLKYLTELDLSCNDIGNEGAKYVSELKQLQSLQLAQT 620
Query: 407 GLTDAGLTGLV------SLNVSNSRITSAGLRHLKPLKNLRSLTL 445
L G+ LV L+VS + I + ++L +K L L++
Sbjct: 621 NLDSEGVKYLVRLDQLTDLDVSENSIDAERCKYLNEMKQLEELSI 665
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 15/195 (7%)
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
+TN+E + I E L N+T L + ++++ ++G G + + L +++SFT
Sbjct: 387 ITNIEKIY--PKKITHEVLQNITKLEKVNYVDIAAIRIGDEGASMIGQMKQLTYLDISFT 444
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITD-------TGLAALTSLTGLTHLDLFGARITDS 387
GIS +R + L++L L + + T L +L LTHLD+ I D
Sbjct: 445 GISYNGMRSIGQLTNLTQLIFSSDDYENYSAPKGVTVAIHLRNLKKLTHLDITYNEIGDE 504
Query: 388 GAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLR 441
G+ ++ NL LE+ L + G L L LN+SN+ ++HL LKNL
Sbjct: 505 GSQFISELLNLTYLEMPNNQLRNEGFKMISKLENLTHLNISNNDFNCESMKHLCELKNLT 564
Query: 442 SLTLESCKVTANDIK 456
SL + +T+ND+K
Sbjct: 565 SLEAFNTGITSNDVK 579
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 28/181 (15%)
Query: 75 IHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLV 134
IHL++ L LD + +I D G + + L NLT L NN + +G K + L NL
Sbjct: 483 IHLRNLKKLTHLDITYN-EIGDEGSQFISELLNLTYLEMP-NNQLRNEGFKMISKLENLT 540
Query: 135 KLDLER----CTRIHGGLVNLKGLMKLESLN--------------IKW-------CNCIT 169
L++ C + L LK L LE+ N +K+ CN I
Sbjct: 541 HLNISNNDFNCESM-KHLCELKNLTSLEAFNTGITSNDVKLIANHLKYLTELDLSCNDIG 599
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
+ K +S L L+SLQ++ + + G+ YL L +LT L++ + A L+ +
Sbjct: 600 NEGAKYVSELKQLQSLQLAQTNLDSEGVKYLVRLDQLTDLDVSENSIDAERCKYLNEMKQ 659
Query: 230 L 230
L
Sbjct: 660 L 660
>gi|290998760|ref|XP_002681948.1| predicted protein [Naegleria gruberi]
gi|284095574|gb|EFC49204.1| predicted protein [Naegleria gruberi]
Length = 391
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 148/326 (45%), Gaps = 6/326 (1%)
Query: 89 NFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL-ERCTRIHGG 147
N ++ D L+++ L LTSL I + A L L +LD+ + G
Sbjct: 53 NKKFKVDDETLQYIGELKQLTSLHIH---GIGIDNVWDIADLKQLTELDISDNKINSEGA 109
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
V + L L+I N D K +S L L L +S +++ + + Y+ + LT
Sbjct: 110 RVISESFKHLTKLDI--SNNTIDVGTKYISQLKQLTYLDVSNNEIEEEDVKYIGNMNGLT 167
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
L+++ + +S L + L++ + D+G + S++ L LN+GFN I
Sbjct: 168 SLSIQYNHIGNIGAQYISGLKQITTLSIYSGDIGDEGAKYISEMKQLTNLNIGFNNINIR 227
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
+H+ L L L++ + G GL +T L L L D+++ S G++++S + L
Sbjct: 228 GAIHISKLKQLTELSISANNFGSGGLKYITQLKQLTKLYCCDSEIDSEGVKYISEMKQLT 287
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDS 387
++LS+ I+ ++ L L L L + + + G ++ L LTHLD+ ++D
Sbjct: 288 DVDLSYNNINSEGVKYLNKLKKLTKLYIGGNDLGNKGAMYISRLNQLTHLDICRNNVSDE 347
Query: 388 GAAYLRNFKNLRSLEICGGGLTDAGL 413
G + K L SL I ++ G+
Sbjct: 348 GFKSISKMKQLSSLFISENTISGEGV 373
>gi|290981112|ref|XP_002673275.1| predicted protein [Naegleria gruberi]
gi|284086857|gb|EFC40531.1| predicted protein [Naegleria gruberi]
Length = 461
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 186/397 (46%), Gaps = 19/397 (4%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L +D++ SD+ + + L NL+ L+ I D GLE L L LT L+ R NN
Sbjct: 4 LKRLDIASSDIGNEQVKILSQFKNLELLNLGDN-HIKDEGLELLSDLKGLTLLNIR-NNR 61
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL-KGLMKLESLNIKWCNCITDSDMKPLS 177
I + +++ + NL L++++ G+ + + L L LN+ C + KP+S
Sbjct: 62 I--ESVESICKMKNLTHLNIKKNRIGDLGIEEIAENLNHLIYLNVSGCGI---TSCKPIS 116
Query: 178 -GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
L LKSL I+ + + G + +++LT L++ + A +S L L L +N
Sbjct: 117 EKLQYLKSLNINRNNLGSKGAQNVAEMKQLTCLSIGNNHIHAKGALYISRLEKLTALCIN 176
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
++ D G E K+ L L++ +N+I + +V +TNL LNL I GLV++
Sbjct: 177 GNRIGDVGAEYIIKMKQLTFLDMQYNQI-ENVMVESSEITNLTYLNLGYNKITTNGLVSI 235
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
T L LK L L L L + +L+ +++S + + + ++ L SL +
Sbjct: 236 TKLDQLKSLYLHYNYYLDPNL--LERMKHLKKLDIS-KNFTQNEFKSICEMTHLTSLIVP 292
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG---- 412
I TG+ ++T L LT LD+ I +GA + K+L L+I + G
Sbjct: 293 RNSINKTGIQSITELKHLTELDIENNEIGTTGAEKISEMKHLLILKIDYNNICSEGARFI 352
Query: 413 --LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 447
L L +L++ + I + G +++ + L L + S
Sbjct: 353 SQLPNLTALSIGANNIRTVGAKYIGQMSQLTELRIYS 389
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
+LK L+++ + +G+ ++ LS NLE +NL I D L L+ L L LN+ +I
Sbjct: 3 HLKRLDIASSDIGNEQVKILSQFKNLELLNLGDNHIKDEGLELLSDLKGLTLLNIRNNRI 62
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYL-RNFKNLRSLEICGGGLT-----DAGLT 414
+ ++ + LTHL++ RI D G + N +L L + G G+T L
Sbjct: 63 --ESVESICKMKNLTHLNIKKNRIGDLGIEEIAENLNHLIYLNVSGCGITSCKPISEKLQ 120
Query: 415 GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
L SLN++ + + S G +++ +K L L++ + + A
Sbjct: 121 YLKSLNINRNNLGSKGAQNVAEMKQLTCLSIGNNHIHA 158
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 10/183 (5%)
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
+ +L+ L++ S IG+E + L+ NL+ L L D + GL LS L L +N+
Sbjct: 1 MKHLKRLDIASSDIGNEQVKILSQFKNLELLNLGDNHIKDEGLELLSDLKGLTLLNIRNN 60
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFGARITDSGAAYLR 393
I S+ + + +L LN+ +I D G+ + +L L +L++ G IT S
Sbjct: 61 RIE--SVESICKMKNLTHLNIKKNRIGDLGIEEIAENLNHLIYLNVSGCGIT-SCKPISE 117
Query: 394 NFKNLRSLEI------CGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 447
+ L+SL I G A + L L++ N+ I + G ++ L+ L +L +
Sbjct: 118 KLQYLKSLNINRNNLGSKGAQNVAEMKQLTCLSIGNNHIHAKGALYISRLEKLTALCING 177
Query: 448 CKV 450
++
Sbjct: 178 NRI 180
>gi|428317856|ref|YP_007115738.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428241536|gb|AFZ07322.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 1221
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 154/309 (49%), Gaps = 49/309 (15%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ ++L ++LS + +TD + L +NL+ L QISD ++ L GL+NLT L
Sbjct: 105 SKFTNLRKLNLSINQITD--VQPLSGLTNLRYLTLT-SNQISD--VKPLSGLTNLTLLYL 159
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
N + +K + NL +L+L N IT D+
Sbjct: 160 ADNQIV---DIKPLSKFTNLRRLNLS-------------------------VNQIT--DV 189
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
+PLSGLTNL+SL ++ ++++D + L GL LT L LE + + L+ L +L L
Sbjct: 190 QPLSGLTNLRSLVLNFNQISD--VKPLSGLTNLTELFLEANQIV--DVKPLAGLTNLTGL 245
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+L Q+ D S + L L L N+I D + L GLTNL L L S I D +
Sbjct: 246 SLASNQIVD--VTPLSTMTELNFLYLSGNKIAD--VKPLSGLTNLIVLFLASNQIAD--V 299
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
L+GL NL L+LS Q+ + L+GLTNL +++LS I+D + LAGL L +L
Sbjct: 300 KPLSGLTNLPTLDLSRNQIADAT--PLAGLTNLTNLDLSRNQIADAT--PLAGLVYLTTL 355
Query: 354 NLDARQITD 362
+L QI D
Sbjct: 356 DLSRNQIPD 364
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 147/305 (48%), Gaps = 32/305 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIH--GGLVNL--------- 151
+ L+NLT LS RN + + + F L L L + + T + GL NL
Sbjct: 83 KTLTNLTELSLIRNQIVDIKPLSKFTNLRKL-NLSINQITDVQPLSGLTNLRYLTLTSNQ 141
Query: 152 ----KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
K L L +L + + D+KPLS TNL+ L +S +++TD + L GL L
Sbjct: 142 ISDVKPLSGLTNLTLLYLADNQIVDIKPLSKFTNLRRLNLSVNQITD--VQPLSGLTNLR 199
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
L L ++ + LS L +L L L Q+ D + + + +L L+L N+I D
Sbjct: 200 SLVLNFNQIS--DVKPLSGLTNLTELFLEANQIVD--VKPLAGLTNLTGLSLASNQIVD- 254
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
+ L +T L L L I D + L+GL NL L L+ Q+ ++ LSGLTNL
Sbjct: 255 -VTPLSTMTELNFLYLSGNKIAD--VKPLSGLTNLIVLFLASNQIAD--VKPLSGLTNLP 309
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDS 387
+++LS I+D + LAGL++L +L+L QI D L L LT LDL +I D
Sbjct: 310 TLDLSRNQIADAT--PLAGLTNLTNLDLSRNQIADA--TPLAGLVYLTTLDLSRNQIPDG 365
Query: 388 GAAYL 392
A L
Sbjct: 366 EAERL 370
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 113/237 (47%), Gaps = 44/237 (18%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ ++L ++LS + +TD + L +NL+SL NF QISD ++ L GL+NLT L
Sbjct: 171 SKFTNLRRLNLSVNQITD--VQPLSGLTNLRSLVLNFN-QISD--VKPLSGLTNLTELFL 225
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC--NCITD- 170
N + +K AGL NL L L +V++ L + LN + N I D
Sbjct: 226 EANQIV---DVKPLAGLTNLTGLSL-----ASNQIVDVTPLSTMTELNFLYLSGNKIADV 277
Query: 171 -------------------SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
+D+KPLSGLTNL +L +S +++ D+ L GL LT L+L
Sbjct: 278 KPLSGLTNLIVLFLASNQIADVKPLSGLTNLPTLDLSRNQIADA--TPLAGLTNLTNLDL 335
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
+ A L+ L L L+L+R Q+ D E+ I K L N+ TDE
Sbjct: 336 SRNQIADAT--PLAGLVYLTTLDLSRNQIPDGEAERL--IQKNKQL---LNQKTDEA 385
>gi|332030619|gb|EGI70307.1| F-box/LRR-repeat protein 14 [Acromyrmex echinatior]
Length = 837
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 156/309 (50%), Gaps = 63/309 (20%)
Query: 59 LLSVDLSG-SDVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFR 114
L +++LSG ++TDSG+ + ++ +L L+ + C Q++D L + + L NL L
Sbjct: 504 LEALNLSGCYNITDSGITNAFCQEYPSLIELNLSLCKQVTDTSLSRIAQFLKNLEHLELG 563
Query: 115 RNNAITAQGMKAFA-GLINLVKLDLERCTRIHG-GLVNLKGL--------MKLESLNIKW 164
IT G+ A GL L +LDL C + G+ +L GL + LE L+++
Sbjct: 564 GCCNITNTGLLLIAWGLKKLKRLDLRSCWHVSDLGIAHLAGLNRETADGNLALEHLSLQD 623
Query: 165 CNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
C ++D ++ +S GLT LKS+ +S C +TDSG+ +L + L LNL C D
Sbjct: 624 CQRLSDEALRHVSLGLTTLKSINLSFCVCITDSGVKHLARMSSLRELNLRSC-------D 676
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLES 280
++S +G + YL E S+I SL V F ++I D+ LVH+ +GL NL+S
Sbjct: 677 NISDIG-MAYL-----------AEGGSRITSLDV---SFCDKIGDQALVHISQGLFNLKS 721
Query: 281 LNLDSCGIGDEGLVNLT------GLC----------------NLKCLELSD-TQVGSSGL 317
L+L +C I DEG+ + G C NLKC++L T++ +SGL
Sbjct: 722 LSLSACQISDEGICKIALETLNIGQCSRLTDRGLHTVAESMKNLKCIDLYGCTKITTSGL 781
Query: 318 RHLSGLTNL 326
+ L L
Sbjct: 782 ERIMKLPQL 790
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 170/335 (50%), Gaps = 45/335 (13%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNL--KGLMKLES 159
RG+ + LS RR + G+ NL L+L C I G+ N + L
Sbjct: 480 RGVKKVQVLSLRRGLS------DVLKGVPNLEALNLSGCYNITDSGITNAFCQEYPSLIE 533
Query: 160 LNIKWCNCITDSDMKPLSG-LTNLKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGCPV 216
LN+ C +TD+ + ++ L NL+ L++ C +T++G+ + GL+KL L+L C
Sbjct: 534 LNLSLCKQVTDTSLSRIAQFLKNLEHLELGGCCNITNTGLLLIAWGLKKLKRLDLRSCW- 592
Query: 217 TAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNE---ITDECLVHLK 273
+S LG LNR + +D G+L + +L + ++DE L H+
Sbjct: 593 ------HVSDLGIAHLAGLNR-ETAD---------GNLALEHLSLQDCQRLSDEALRHVS 636
Query: 274 -GLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESI 329
GLT L+S+NL C I D G+ +L + +L+ L L S + G+ +L+ G + + S+
Sbjct: 637 LGLTTLKSINLSFCVCITDSGVKHLARMSSLRELNLRSCDNISDIGMAYLAEGGSRITSL 696
Query: 330 NLSF-TGISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG-ARITD 386
++SF I D +L ++ GL +LKSL+L A QI+D G+ + L L++ +R+TD
Sbjct: 697 DVSFCDKIGDQALVHISQGLFNLKSLSLSACQISDEGICKI----ALETLNIGQCSRLTD 752
Query: 387 SG-AAYLRNFKNLRSLEICG-GGLTDAGLTGLVSL 419
G + KNL+ +++ G +T +GL ++ L
Sbjct: 753 RGLHTVAESMKNLKCIDLYGCTKITTSGLERIMKL 787
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 133/298 (44%), Gaps = 79/298 (26%)
Query: 176 LSGLTNLKSLQIS-CSKVTDSGI--AYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLF 231
L G+ NL++L +S C +TDSGI A+ + L LNL C VT L ++ F
Sbjct: 498 LKGVPNLEALNLSGCYNITDSGITNAFCQEYPSLIELNLSLCKQVTDTSLSRIAQ----F 553
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG-IGD 290
NL +L GC + G L + GL L+ L+L SC + D
Sbjct: 554 LKNLEHLELG--GCCNITNTGLLLIA---------------WGLKKLKRLDLRSCWHVSD 596
Query: 291 EGLVNLTGLCN--------LKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSF-TGISDG 339
G+ +L GL L+ L L D Q + LRH+S GLT L+SINLSF I+D
Sbjct: 597 LGIAHLAGLNRETADGNLALEHLSLQDCQRLSDEALRHVSLGLTTLKSINLSFCVCITDS 656
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
++ LA +SSL+ LNL + D I+D G AYL
Sbjct: 657 GVKHLARMSSLRELNLRS---CDN--------------------ISDIGMAYLAE----- 688
Query: 400 SLEICGGGLTDAGLTGLVSLNVSN-SRITSAGLRHL-KPLKNLRSLTLESCKVTANDI 455
G + + SL+VS +I L H+ + L NL+SL+L +C+++ I
Sbjct: 689 ------------GGSRITSLDVSFCDKIGDQALVHISQGLFNLKSLSLSACQISDEGI 734
>gi|290981696|ref|XP_002673566.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284087150|gb|EFC40822.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 411
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 152/343 (44%), Gaps = 55/343 (16%)
Query: 111 LSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITD 170
LS + NN +G F I +K+D E T + + L+ + +L L++++ N TD
Sbjct: 74 LSLKCNNDDKLKGQ--FLQNIETLKVDRESLTIMFDCKI-LEFMKQLTDLDVQYNNLGTD 130
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG---CPVTAACLDSLSAL 227
++K +S L L++L IS + + G Y+ L +LT LN+ G C T +S++
Sbjct: 131 -EVKYISQLKQLRNLDISINNIDKEGAKYISQLSQLTKLNISGNCYCIGTEGA-KHISSM 188
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL------------ 275
L YL++++ ++ D+G + S++ L L + N I DE H+ G+
Sbjct: 189 KQLTYLDISKNEIGDEGAKSISELKQLTSLYILTNNIGDEGAKHISGMNQLTELDISFNL 248
Query: 276 -----------------------------------TNLESLNLDSCGIGDEGLVNLTGLC 300
+ L +LN+ SC I G ++ L
Sbjct: 249 IGIEGVRHISSMKQLTSLSINNAKIGDGAKYLGAMSQLTNLNIFSCNIESNGAKQISALQ 308
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
LK L + Q+G G +++S + L+S+ + I + + ++G+ L +LN+ I
Sbjct: 309 QLKFLGIGYNQLGHEGAKNISEMKQLDSLYICGNDIGERGAKHISGMKRLTTLNICENNI 368
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
D G ++ LT L ++ I+ G +L+ K L L+I
Sbjct: 369 GDNGAKFISQSKSLTILSIYSNDISQVGEKFLQRMKQLERLDI 411
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 7/206 (3%)
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
C+ + L L++ +N + + + ++ L L +L++ I EG ++ L L
Sbjct: 108 CKILEFMKQLTDLDVQYNNLGTDEVKYISQLKQLRNLDISINNIDKEGAKYISQLSQLTK 167
Query: 305 LELSDTQ--VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
L +S +G+ G +H+S + L +++S I D + ++ L L SL + I D
Sbjct: 168 LNISGNCYCIGTEGAKHISSMKQLTYLDISKNEIGDEGAKSISELKQLTSLYILTNNIGD 227
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD-----AGLTGLV 417
G ++ + LT LD+ I G ++ + K L SL I + D ++ L
Sbjct: 228 EGAKHISGMNQLTELDISFNLIGIEGVRHISSMKQLTSLSINNAKIGDGAKYLGAMSQLT 287
Query: 418 SLNVSNSRITSAGLRHLKPLKNLRSL 443
+LN+ + I S G + + L+ L+ L
Sbjct: 288 NLNIFSCNIESNGAKQISALQQLKFL 313
>gi|414076287|ref|YP_006995605.1| hypothetical protein ANA_C11003 [Anabaena sp. 90]
gi|413969703|gb|AFW93792.1| leucine-rich repeat-containing protein [Anabaena sp. 90]
Length = 474
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 140/278 (50%), Gaps = 49/278 (17%)
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
SD+KPLS LT L SL +S +K++D I L L KLT L L ++ + SLS L L
Sbjct: 98 SDIKPLSNLTKLTSLGLSKNKISD--IKSLSNLTKLTSLGLSKNKISD--IKSLSNLTKL 153
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L+L Q+SD S + L L+L N+I+D + L LTNL LNL I D
Sbjct: 154 TKLDLVGNQISD--TTPLSNLTKLTSLDLWGNQISD--IKPLSNLTNLTFLNLVGNKISD 209
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
++ LS LT L S+ LS ISD ++ L+ ++L
Sbjct: 210 --------------------------IKPLSNLTKLTSLGLSKNKISD--IKSLSNFTNL 241
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
L+L QI+DT L++LT LT LDL+G +I+D L N NL L + G +++
Sbjct: 242 TKLDLVGNQISDT--TPLSNLTKLTSLDLWGNQISD--IKPLSNLTNLTFLILWGNQISN 297
Query: 411 ----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
+ LT L SL +S ++I+ +KPL NL +LT
Sbjct: 298 IKPLSNLTNLTSLTLSLNQIS-----DIKPLSNLTNLT 330
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 134/418 (32%), Positives = 202/418 (48%), Gaps = 60/418 (14%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSN---LTS 110
SQ + +L+ +L+ ++++ + +K SNL L + +S + ++ LSN LTS
Sbjct: 78 SQANQILT-NLTSLGLSENKISDIKPLSNLTKLT---SLGLSKNKISDIKSLSNLTKLTS 133
Query: 111 LSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITD 170
L +N +K+ + L L KLDL L L KL SL++ W N I
Sbjct: 134 LGLSKNK---ISDIKSLSNLTKLTKLDL--VGNQISDTTPLSNLTKLTSLDL-WGNQI-- 185
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
SD+KPLS LTNL L + +K++D I L L KLT L L ++ + SLS +L
Sbjct: 186 SDIKPLSNLTNLTFLNLVGNKISD--IKPLSNLTKLTSLGLSKNKISD--IKSLSNFTNL 241
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L+L Q+SD S + L L+L N+I+D + L LTNL L L G
Sbjct: 242 TKLDLVGNQISD--TTPLSNLTKLTSLDLWGNQISD--IKPLSNLTNLTFLIL--WGNQI 295
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
+ L+ L NL L LS Q+ S ++ LS LTNL ++L ISD ++ L+ L++L
Sbjct: 296 SNIKPLSNLTNLTSLTLSLNQI--SDIKPLSNLTNLTYLDLWGNKISD--IKPLSNLTNL 351
Query: 351 KSLNLDARQITD--------------------TGLAALTSLTGLTHLDLFGARITDSGAA 390
L L + +I+D + + L+SLT LT L L +I+D
Sbjct: 352 TYLYLLSNKISDIKPLSNLTNLTLLFLSLNQISDIKPLSSLTNLTFLILSKNQISD--IK 409
Query: 391 YLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
L N NL SL + ++D + LT L L++ + I+ +KPL NL +LT
Sbjct: 410 PLSNLTNLTSLGLSENKISDIKPLSNLTNLTYLSLWENPIS-----DIKPLSNLTNLT 462
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 119/334 (35%), Positives = 172/334 (51%), Gaps = 33/334 (9%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI--QISDGGLEHLRGLSNLTSL 111
S + L S+DL G+ ++D +K SNL +L F + +ISD ++ L L+ LTSL
Sbjct: 170 SNLTKLTSLDLWGNQISD-----IKPLSNLTNLTFLNLVGNKISD--IKPLSNLTKLTSL 222
Query: 112 SFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDS 171
+N +K+ + NL KLDL L L KL SL++ W N I S
Sbjct: 223 GLSKNK---ISDIKSLSNFTNLTKLDL--VGNQISDTTPLSNLTKLTSLDL-WGNQI--S 274
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
D+KPLS LTNL L + +++ S I L L LT L L ++ + LS L +L
Sbjct: 275 DIKPLSNLTNLTFLILWGNQI--SNIKPLSNLTNLTSLTLSLNQISD--IKPLSNLTNLT 330
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
YL+L ++SD + S + +L L L N+I+D + L LTNL L L I D
Sbjct: 331 YLDLWGNKISD--IKPLSNLTNLTYLYLLSNKISD--IKPLSNLTNLTLLFLSLNQISD- 385
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
+ L+ L NL L LS Q+ S ++ LS LTNL S+ LS ISD ++ L+ L++L
Sbjct: 386 -IKPLSSLTNLTFLILSKNQI--SDIKPLSNLTNLTSLGLSENKISD--IKPLSNLTNLT 440
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L+L I+D + L++LT LT L L+ T
Sbjct: 441 YLSLWENPISD--IKPLSNLTNLTELYLWENPFT 472
>gi|195383050|ref|XP_002050239.1| GJ20310 [Drosophila virilis]
gi|194145036|gb|EDW61432.1| GJ20310 [Drosophila virilis]
Length = 542
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 188/371 (50%), Gaps = 62/371 (16%)
Query: 7 SQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG 66
S +FN LV R + +V + + R +L+DL LG +L S++LSG
Sbjct: 206 SPSLFNCLV-RRGIKKVQILSLRR-SLKDLVLGV----------------PALTSLNLSG 247
Query: 67 S-DVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQ 122
+V D L H D NL++LD + C QI+D L + + L NL +L IT
Sbjct: 248 CFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGRIAQHLKNLETLELGGCCNITNT 307
Query: 123 GMKAFA-GLINLVKLDLERCTRIH-GGLVNLKGL--------MKLESLNIKWCNCITDSD 172
G+ A GL L L+L C I G+ +L G ++LE L ++ C ++D
Sbjct: 308 GLLLIAWGLKKLRHLNLRSCWHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEA 367
Query: 173 MKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
+ ++ GLT+LKS+ +S C VTDSG+ +L + KL LNL C D++S +G
Sbjct: 368 LGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC-------DNISDIGMA 420
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDSCGI 288
+ L++ G S I SL V F ++I+D+ L H+ +GL L SL+L+ C I
Sbjct: 421 Y--------LTEGG----SGINSLDV---SFCDKISDQALTHIAQGLYRLRSLSLNQCQI 465
Query: 289 GDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKL 344
D+G++ + L L+ L + +++ GL+ L+ L+NL++I+L T +S + +
Sbjct: 466 TDQGMLKIAKSLHELENLNIGQCSRITDKGLQTLAEDLSNLKTIDLYGCTQLSSKGIDII 525
Query: 345 AGLSSLKSLNL 355
L L+ LNL
Sbjct: 526 MKLPKLQKLNL 536
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 166/329 (50%), Gaps = 36/329 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAF-----AGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
RG+ + LS RR+ G+ A +G N+ ++L H V+L L
Sbjct: 216 RGIKKVQILSLRRSLKDLVLGVPALTSLNLSGCFNVADMNLG-----HAFSVDLPNL--- 267
Query: 158 ESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGC 214
++L++ C ITD+ + ++ L NL++L++ C +T++G+ + GL+KL LNL C
Sbjct: 268 KTLDLSLCKQITDTSLGRIAQHLKNLETLELGGCCNITNTGLLLIAWGLKKLRHLNLRSC 327
Query: 215 PVTA-------ACLDSLSALGSL--FYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A +A G+L YL L CQ LSD+ ++ + SLK +NL F
Sbjct: 328 WHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCV 387
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRH 319
+TD L HL + LE LNL SC I D G+ LT G + L++S ++ L H
Sbjct: 388 SVTDSGLKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTH 447
Query: 320 LS-GLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNL-DARQITDTGLAALTS-LTGLT 375
++ GL L S++L+ I+D + K+A L L++LN+ +ITD GL L L+ L
Sbjct: 448 IAQGLYRLRSLSLNQCQITDQGMLKIAKSLHELENLNIGQCSRITDKGLQTLAEDLSNLK 507
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEI 403
+DL+G +++ G + L+ L +
Sbjct: 508 TIDLYGCTQLSSKGIDIIMKLPKLQKLNL 536
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 128/269 (47%), Gaps = 57/269 (21%)
Query: 202 GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF 261
G+ LT LNL GC A LG F ++L +LK L+L
Sbjct: 236 GVPALTSLNLSGCFNVADM-----NLGHAFSVDL----------------PNLKTLDLSL 274
Query: 262 -NEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLEL-SDTQVGSSG 316
+ITD L + + L NLE+L L C I + GL+ + GL L+ L L S + G
Sbjct: 275 CKQITDTSLGRIAQHLKNLETLELGGCCNITNTGLLLIAWGLKKLRHLNLRSCWHISDQG 334
Query: 317 LRHLSGLTNLES---INLSFTGI------SDGSLRKLA-GLSSLKSLNLD-ARQITDTGL 365
+ HL+G + + + L + G+ SD +L +A GL+SLKS+NL +TD+GL
Sbjct: 335 IGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGL 394
Query: 366 AALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN- 423
L + L L+L I+D G AYL T+ G +G+ SL+VS
Sbjct: 395 KHLARMPKLEQLNLRSCDNISDIGMAYL----------------TEGG-SGINSLDVSFC 437
Query: 424 SRITSAGLRHL-KPLKNLRSLTLESCKVT 451
+I+ L H+ + L LRSL+L C++T
Sbjct: 438 DKISDQALTHIAQGLYRLRSLSLNQCQIT 466
>gi|66807643|ref|XP_637544.1| hypothetical protein DDB_G0286583 [Dictyostelium discoideum AX4]
gi|60465980|gb|EAL64047.1| hypothetical protein DDB_G0286583 [Dictyostelium discoideum AX4]
Length = 722
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 202/426 (47%), Gaps = 52/426 (12%)
Query: 47 KWMDVIASQGSSLLSVDLSG--SDVTDSGLIH-LKDCSNLQSLDFNFCIQISDGGLEHLR 103
K MD I + G+ + S+DLS + V + L++ K + L ++ F C ++D GL+ R
Sbjct: 309 KKMDQIVASGARIYSLDLSHQFAVVNNDFLLNCFKYMAELSNVYFRNCENLNDIGLQIFR 368
Query: 104 GLS---NLTSLSFRRNNAITAQGMKAFAGLINLVKLDLER--CTRIHGGLVNLKGLMKLE 158
+ NL +L R +N IT G++ GL+NL +L L CT I GL L L+KL+
Sbjct: 369 QPNFEKNLKTLDLR-DNRITDVGIRNLKGLLNLEELYLGSTGCTDI--GLALLCNLLKLK 425
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC-PVT 217
+L++ CN ITDS M + T LK L +S ++VTD GI + L L L + C +T
Sbjct: 426 TLDVSKCN-ITDSSMDIICRFTELKFLYLSGTQVTDKGINTISKLPNLIQLYVSNCLRIT 484
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 277
L L+ LG +LK+L++ +I + L+
Sbjct: 485 NQSLFFLAYLGK-----------------------TLKLLDIFQTKIGLNGFIQLRMFKQ 521
Query: 278 LESLNLD-SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN---LSF 333
L+ L L I D + +L L NL+ L+LSD + + LS LTNL+S+ LS
Sbjct: 522 LQFLVLPGRDSINDATIGHLNSLSNLRKLDLSDYR----NISDLSPLTNLQSLTELLLSN 577
Query: 334 TGISDGS-LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
T ISD S + + + SL+ L+L+ ++T G++ L +L + +I YL
Sbjct: 578 TKISDNSIINSIKTMDSLEVLSLNKTEVTTEGVSQLVNLNLTSLSLS-STKIDGKSLYYL 636
Query: 393 RNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
K+L+ L+I +TD + L + + S I G RSL + + K+
Sbjct: 637 GQMKSLQKLDISFNDITDNSMDYLKPIADTLSHIDLRG------TDTFRSLHMFNEKIVR 690
Query: 453 NDIKRL 458
+K +
Sbjct: 691 PPVKNI 696
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 147/292 (50%), Gaps = 16/292 (5%)
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NLK+L + +++TD GI LKGL L L L T L L L L L++++C +
Sbjct: 375 NLKTLDLRDNRITDVGIRNLKGLLNLEELYLGSTGCTDIGLALLCNLLKLKTLDVSKCNI 434
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGL 299
+D + + LK L L ++TD+ + + L NL L + +C I ++ L L L
Sbjct: 435 TDSSMDIICRFTELKFLYLSGTQVTDKGINTISKLPNLIQLYVSNCLRITNQSLFFLAYL 494
Query: 300 -CNLKCLELSDTQVGSSGLRHLSGLTNLESINLS-FTGISDGSLRKLAGLSSLKSLNL-D 356
LK L++ T++G +G L L+ + L I+D ++ L LS+L+ L+L D
Sbjct: 495 GKTLKLLDIFQTKIGLNGFIQLRMFKQLQFLVLPGRDSINDATIGHLNSLSNLRKLDLSD 554
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL 416
R I+D L+ LT+L LT L L +I+D+ + + + K + SLE+ T+ G+
Sbjct: 555 YRNISD--LSPLTNLQSLTELLLSNTKISDN--SIINSIKTMDSLEVLSLNKTEVTTEGV 610
Query: 417 VSL--------NVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
L ++S+++I L +L +K+L+ L + +T N + L+
Sbjct: 611 SQLVNLNLTSLSLSSTKIDGKSLYYLGQMKSLQKLDISFNDITDNSMDYLKP 662
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 128/314 (40%), Gaps = 82/314 (26%)
Query: 203 LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
+Q+L L + +T +D + A G+ Y S D +F+ + + +LN
Sbjct: 293 IQRLIELMVSSNRLTRKKMDQIVASGARIY--------SLDLSHQFAVVNNDFLLN---- 340
Query: 263 EITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS 321
C ++ L+N+ N ++ IG + NLK L+L D ++ G+R+L
Sbjct: 341 -----CFKYMAELSNVYFRNCENLNDIGLQIFRQPNFEKNLKTLDLRDNRITDVGIRNLK 395
Query: 322 GLTNLESINLSFTG------------------------ISDGSLRKLAGLSSLKSLNLDA 357
GL NLE + L TG I+D S+ + + LK L L
Sbjct: 396 GLLNLEELYLGSTGCTDIGLALLCNLLKLKTLDVSKCNITDSSMDIICRFTELKFLYLSG 455
Query: 358 RQITDTGLAALTSLTGLTH--------------------------LDLFGARITDSGAAY 391
Q+TD G+ ++ L L LD+F +I +G
Sbjct: 456 TQVTDKGINTISKLPNLIQLYVSNCLRITNQSLFFLAYLGKTLKLLDIFQTKIGLNGFIQ 515
Query: 392 LRNFKNLRSLEICG-GGLTDA------GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
LR FK L+ L + G + DA L+ L L++S+ R + L PL NL+SLT
Sbjct: 516 LRMFKQLQFLVLPGRDSINDATIGHLNSLSNLRKLDLSDYR----NISDLSPLTNLQSLT 571
Query: 445 ---LESCKVTANDI 455
L + K++ N I
Sbjct: 572 ELLLSNTKISDNSI 585
>gi|343419347|emb|CCD19427.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 1478
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 192/370 (51%), Gaps = 58/370 (15%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLER 140
S L++L+ +C I+D + L +S+L +L+ IT + + LI L LDL
Sbjct: 725 SRLETLNLMYCTGITD--VSPLSKMSSLYTLNLSYCTGIT--DVSPLSMLIRLETLDLTG 780
Query: 141 CTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ-ISCSKVTDSGIAY 199
CT I + L L +LE+LN+++C IT D+ PLS L+ L++L + C+ +TD ++
Sbjct: 781 CTGI-TDVSPLSKLSRLETLNLRYCTGIT--DVSPLSKLSRLETLNLMYCTGITD--VSP 835
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
L L +L LNL C + LS + +L L+L+ C
Sbjct: 836 LSKLSRLETLNLMYCTGITD-VSPLSLISNLRTLDLSHCT-------------------- 874
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
G +++ L ++NL SL L C GI D + L+ L L+ L+LS G + +
Sbjct: 875 GITDVSP-----LSLMSNLCSLYLSHCTGITD--VPPLSMLIRLEKLDLSGC-TGITDVS 926
Query: 319 HLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
LS L+ LE++NL + TGI+D S L+ LS L++LNL + TG+ ++ L+ L+ L
Sbjct: 927 PLSKLSRLETLNLMYCTGITDVS--PLSKLSRLETLNL----MYCTGITDVSPLSKLSRL 980
Query: 378 D----LFGARITDSGAAYLRNFKNLRSLEIC-GGGLTD-AGLTGLVSL-NVSNSRITSAG 430
+ ++ ITD + L +F NLR+L++ G+TD + L+ L+ L N+S S I AG
Sbjct: 981 ETLNLMYCTGITD--VSPLSDFINLRTLDLSFYTGITDVSPLSMLIRLENLSLSNI--AG 1036
Query: 431 LRHLKPLKNL 440
+ + PL L
Sbjct: 1037 ITDVSPLSTL 1046
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 199/402 (49%), Gaps = 49/402 (12%)
Query: 77 LKDCSNLQSLDFNFCIQISDGG------------LEHLRGLSNLTSLS-FRRNNAITAQG 123
L D NL++LD +F I+D L ++ G+++++ LS R N + G
Sbjct: 997 LSDFINLRTLDLSFYTGITDVSPLSMLIRLENLSLSNIAGITDVSPLSTLIRLNVLYLSG 1056
Query: 124 ------MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS 177
+ + L +L LDL CT I + L L +LE+LN+ +C IT D+ PLS
Sbjct: 1057 CTGITDVSPLSKLSSLRTLDLSHCTGI-TDVSPLSKLSRLETLNLMYCTGIT--DVSPLS 1113
Query: 178 GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
++NL++L +S C+ +TD ++ L + L L L C + LS L L L+L+
Sbjct: 1114 LISNLRTLDLSHCTGITD--VSPLSLMSNLCSLYLSHCTGITD-VPPLSMLIRLEKLDLS 1170
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLV 294
C D SK+ L+ LNL + ITD + L ++NL SL L C GI D +
Sbjct: 1171 GCTGITD-VSPLSKLSRLETLNLMYCTGITD--VSPLSLMSNLCSLYLSHCTGITD--VS 1225
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSL 353
L+ L L+ L+LS G + + LS L+ LE++NL + TGI+D S L+ LS L++L
Sbjct: 1226 PLSMLIRLEKLDLSGC-TGITDVSPLSKLSRLETLNLMYCTGITDVS--PLSKLSRLETL 1282
Query: 354 NLDARQITDTGLAALTSLTGLTHL-DLFGARITD-SGAAYLRNFKNLRSLEI--CGGGLT 409
NL + TG+ ++ L+ +++L L+ + T + L L +L + C G
Sbjct: 1283 NL----MYCTGITDVSPLSLMSNLCSLYLSHCTGITDVPPLSKLSRLETLNLMYCTGITD 1338
Query: 410 DAGLTGLVSLNVSNSRITSAGLRHLKPL---KNLRSLTLESC 448
+ L+ L L N + G+ + PL NLR+L L C
Sbjct: 1339 VSPLSKLSRLETLN-LMYCTGITDVSPLSLISNLRTLDLSHC 1379
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 173/372 (46%), Gaps = 45/372 (12%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLER 140
+ L+ LD + C++ D L H G+++++ LS L +L LDL
Sbjct: 415 ATLRDLDVSKCLRTLD--LSHCTGITDVSPLS----------------ELSSLRTLDLSH 456
Query: 141 CTRIHGGLVNLKGLMKLESL-NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY 199
CT G+ ++ L KL SL +C +D+ PLS L+ L+ L +S SG+
Sbjct: 457 CT----GITDVSPLSKLSSLRTFDLSHCTGITDVSPLSTLSGLEVLNLSGCTGVASGVDS 512
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
L L+ L L L + A L + L L L+L+ C S + L+VLNL
Sbjct: 513 LCSLRMLRELRLSRLAINDAVLRDIVVLKCLRTLDLSHCT-GITNVSPLSTLSGLEVLNL 571
Query: 260 -GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ--VGSSG 316
G +ITD + L L + +LNL C G+ +++ L L LE + G +
Sbjct: 572 SGCADITD--ISPLSDLNIMHTLNLSFC----TGITDVSPLSKLSRLETLNLMYCTGITD 625
Query: 317 LRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLTGL 374
+ LS ++NL +++LS TGI+D S L+ +S+L++L+L ITD + L+ L L
Sbjct: 626 VSPLSLISNLRTLDLSHCTGITDVS--PLSLISNLRTLDLSHCTGITD--VPPLSMLIRL 681
Query: 375 THLDLFGAR-ITDSGAAYLRNFKNLRSLEI--CGGGLTDAGLTGLVSLNVSNSRITSAGL 431
LDL G ITD + L L +L + C G + L+ L L N + G+
Sbjct: 682 EKLDLSGCTGITD--VSPLSKLSRLETLNLMYCTGITDVSPLSKLSRLETLN-LMYCTGI 738
Query: 432 RHLKPLKNLRSL 443
+ PL + SL
Sbjct: 739 TDVSPLSKMSSL 750
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 202/453 (44%), Gaps = 51/453 (11%)
Query: 21 TEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDC 80
+ SL RDC + CLG V+++ + G S L+ L+ ++TD L + C
Sbjct: 217 SHTSLTVGRDCFIP--CLGV---VSEEVL-----AGVSRLT--LNKVELTDRDLWRIHKC 264
Query: 81 SNLQSLDFNFC-------IQISDGG---------LEHLRGLSNLTSLSFRRNNAITAQGM 124
SNL++L C Q+ G E +RG+S L ++ +N + + +
Sbjct: 265 SNLKALSIEECTGRICLGTQMPHGNSPTRENCDDTERVRGISCLEEITI--SNCMNIKEI 322
Query: 125 KAFAGLINLVKLDLERCTRIHGGLVNL---KGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
K L + +L + N+ K +++LE + +C + ++PL+
Sbjct: 323 KGLNTLACISRLRFINSNISDDCVANISENKHILELE-----FQDCANITSLRPLANSQL 377
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
++SL IS +S I L L +L L L + A L L L L+L+ C
Sbjct: 378 IESLVISNCINLESEINVLAALNRLRELRLSRLAINDATLRDLDVSKCLRTLDLSHCTGI 437
Query: 242 DDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGL 299
D S++ SL+ L+L ITD + L L++L + +L C GI D + L+ L
Sbjct: 438 TD-VSPLSELSSLRTLDLSHCTGITD--VSPLSKLSSLRTFDLSHCTGITD--VSPLSTL 492
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 359
L+ L LS +SG+ L L L + LS I+D LR + L L++L+L +
Sbjct: 493 SGLEVLNLSGCTGVASGVDSLCSLRMLRELRLSRLAINDAVLRDIVVLKCLRTLDL-SHC 551
Query: 360 ITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS 418
T ++ L++L+GL L+L G A ITD N + +L C G + L+ L
Sbjct: 552 TGITNVSPLSTLSGLEVLNLSGCADITDISPLSDLNIMHTLNLSFCTGITDVSPLSKLSR 611
Query: 419 LNVSNSRITSAGLRHLKPL---KNLRSLTLESC 448
L N + G+ + PL NLR+L L C
Sbjct: 612 LETLN-LMYCTGITDVSPLSLISNLRTLDLSHC 643
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 13/129 (10%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
+DV+ LI SNL++LD + C I+D + L +SNL SL IT +
Sbjct: 1360 TDVSPLSLI-----SNLRTLDLSHCTGITD--VSPLSLMSNLCSLYLSHCTGIT--DVPP 1410
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
+ LI L K DL CT I + L L +LE+LN+ +C IT D+ PLS ++ L++L
Sbjct: 1411 LSMLIRLEKSDLSGCTGI-TDVSPLSKLSRLETLNLMYCTGIT--DVSPLSKVSRLETLN 1467
Query: 187 -ISCSKVTD 194
+ C+ +TD
Sbjct: 1468 LMYCTGITD 1476
>gi|290998998|ref|XP_002682067.1| predicted protein [Naegleria gruberi]
gi|284095693|gb|EFC49323.1| predicted protein [Naegleria gruberi]
Length = 427
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 152/343 (44%), Gaps = 40/343 (11%)
Query: 92 IQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLER--CTRIHGGLV 149
++I + G++ + L L SL + + + + + L +LD+ R C R +GG
Sbjct: 114 LKIGEDGIKAISQLKQLKSLYLYAD--VDSNALNGVFEMTQLTELDINRKQCHRWNGGFK 171
Query: 150 NLKGLMKLESLNIKWCNCITDSDM-KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTL 208
LK L L+ L C CI D+ + +S L L L I+ + + G + L+ LT+
Sbjct: 172 KLKQLTNLKKLCAVGC-CIDYEDVFQSISQLDQLTELHIASNSLYSDGAKLIGKLKNLTI 230
Query: 209 LNLEGCPVTAAC---LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
L++ C V L+S+S L +L YL+ L G SK+ +L L + N I+
Sbjct: 231 LDISYCGVCIPHNEGLESISELINLTYLDCANNGLRSIG--PISKLENLTFLRVSLNRIS 288
Query: 266 --DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL 323
DE +V LK LTNL+ + + S +
Sbjct: 289 SLDESIVKLKKLTNLD---------------------------VGYNSISDQSAEVFSSM 321
Query: 324 TNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGAR 383
L S+ + I D S + ++ +S LK+L +D+ ++D G +++++ LT LD+
Sbjct: 322 KQLTSLFIQENNIGDKSAKSISEISQLKNLCIDSNIVSDKGAKSISTMENLTELDIRNND 381
Query: 384 ITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRI 426
I D GA L L++L I +++ G+ L L S + +
Sbjct: 382 IGDDGAKSLTRLTKLKTLRIAQNNISEEGMMTLKKLKYSTNVV 424
>gi|296123881|ref|YP_003631659.1| serine/threonine protein kinase-related protein [Planctomyces
limnophilus DSM 3776]
gi|296016221|gb|ADG69460.1| Serine/threonine protein kinase-related protein [Planctomyces
limnophilus DSM 3776]
Length = 1655
Score = 87.0 bits (214), Expect = 2e-14, Method: Composition-based stats.
Identities = 95/364 (26%), Positives = 150/364 (41%), Gaps = 21/364 (5%)
Query: 25 LEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQ 84
L A +DC G+ D+ + I + +L S++L GS VT+ +L +L
Sbjct: 1279 LAALKDCHRLTFLALYNTGIGDEGVREIC-ELKALRSLELQGSKVTNEVFFYLMKLPHLL 1337
Query: 85 SLDFNFCIQISDGGLEHLRGLSNLTSL---------------SFRRNNAITAQGMKAFAG 129
S+D + Q++ +E R L + +N
Sbjct: 1338 SVDLRY-TQVTPEAIESFRKQKPLCEVKCDAGVLPRWEPNGDELVKNAKADRAAAAFVLK 1396
Query: 130 LINLVKLDLERCTRIHGGLVNLK-GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
V LD + +HG L L KL ++++ +T D + G NL LQ+
Sbjct: 1397 QGKYVWLDNAK-DPLHGDPAILPPHLFKLTGISLEGLKTLTPRDFEIFKGCQNLSDLQLL 1455
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
+TD + +G +T L L+G VT+ L S L +L++ Q D +
Sbjct: 1456 NMGITDEHLRAFEGTTSITKLKLDGQAVTSKGLSYFSGCKRLTFLSVWATQADDKFIQSI 1515
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
+ LNLG ITD + + L NLE L+ G+ DEG+ +L NL L L+
Sbjct: 1516 AS-PDYTYLNLGGTRITDASIAAFESLQNLEMATLNFTGLTDEGIEHLASAENLTYLGLN 1574
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISD-GSLRKLAGLSSLKSLNLDARQITDTGLAA 367
T++ + + L LE + LS T SD G L + L +LK LNL ++T +
Sbjct: 1575 HTRLTDASAKVFLKLNQLEELTLSNTQFSDQGLLLLVNALPNLKRLNLLETKVTADSVDK 1634
Query: 368 LTSL 371
SL
Sbjct: 1635 FQSL 1638
Score = 81.3 bits (199), Expect = 1e-12, Method: Composition-based stats.
Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 24/217 (11%)
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
GC+ S L++LN+G ITDE L +G T++ L LD + +GL +G L
Sbjct: 1445 GCQNLS---DLQLLNMG---ITDEHLRAFEGTTSITKLKLDGQAVTSKGLSYFSGCKRLT 1498
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
L + TQ ++ ++ + +NL T I+D S+ L +L+ L+ +TD
Sbjct: 1499 FLSVWATQADDKFIQSIAS-PDYTYLNLGGTRITDASIAAFESLQNLEMATLNFTGLTDE 1557
Query: 364 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN 423
G+ L S LT+L L R+TD+ A L L + +D GL LV+
Sbjct: 1558 GIEHLASAENLTYLGLNHTRLTDASAKVFLKLNQLEELTLSNTQFSDQGLLLLVN----- 1612
Query: 424 SRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
L NL+ L L KVTA+ + + QS
Sbjct: 1613 ------------ALPNLKRLNLLETKVTADSVDKFQS 1637
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 101/408 (24%), Positives = 160/408 (39%), Gaps = 84/408 (20%)
Query: 108 LTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNC 167
LT + FR + A+ + F+G +L K+ L +
Sbjct: 1146 LTGIEFRNKRDLDAKDFEVFSGCRDLEKVRLGFSS------------------------- 1180
Query: 168 ITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA 226
I+D+ +KPL L L L++S C KVT + I + + LT L PV D L+
Sbjct: 1181 ISDAHLKPLENLPKLTHLELSQCEKVTGAAI---RKFKHLTHLEAWAVPVGD---DDLAP 1234
Query: 227 LGSLFYLNLNR--CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
L + NL+ +++ F+ + L+ L F I ++ L LK L L L
Sbjct: 1235 LKDNPFRNLDLGGTRITGKALAAFTNLSDLRSSRLAFTSIKNKDLAALKDCHRLTFLALY 1294
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD---GSL 341
+ GIGDEG+ + L L+ LEL ++V + +L L +L S++L +T ++ S
Sbjct: 1295 NTGIGDEGVREICELKALRSLELQGSKVTNEVFFYLMKLPHLLSVDLRYTQVTPEAIESF 1354
Query: 342 RKLAGLSSLKS-----------------------------------LNLDARQITDTGLA 366
RK L +K + LD + G
Sbjct: 1355 RKQKPLCEVKCDAGVLPRWEPNGDELVKNAKADRAAAAFVLKQGKYVWLDNAKDPLHGDP 1414
Query: 367 AL--TSLTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLV 417
A+ L LT + L G + +T + +NL L++ G+TD G T +
Sbjct: 1415 AILPPHLFKLTGISLEGLKTLTPRDFEIFKGCQNLSDLQLLNMGITDEHLRAFEGTTSIT 1474
Query: 418 SLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 465
L + +TS GL + K LT S T D K +QS P+
Sbjct: 1475 KLKLDGQAVTSKGLSYFSGCKR---LTFLSVWATQADDKFIQSIASPD 1519
Score = 67.8 bits (164), Expect = 1e-08, Method: Composition-based stats.
Identities = 101/432 (23%), Positives = 171/432 (39%), Gaps = 38/432 (8%)
Query: 61 SVDLSGSDVTDSGLIHLKD------CSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
SV L+G + + + KD C +L+ + F ISD L+ L L LT L
Sbjct: 1143 SVQLTGIEFRNKRDLDAKDFEVFSGCRDLEKVRLGFS-SISDAHLKPLENLPKLTHLELS 1201
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNC-ITDSDM 173
+ +T ++ F L +L + G +L L N+ IT +
Sbjct: 1202 QCEKVTGAAIRKFKHLTHL------EAWAVPVGDDDLAPLKDNPFRNLDLGGTRITGKAL 1255
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
+ L++L+S +++ + + + +A LK +LT L L + + + L +L L
Sbjct: 1256 AAFTNLSDLRSSRLAFTSIKNKDLAALKDCHRLTFLALYNTGIGDEGVREICELKALRSL 1315
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI----- 288
L +++++ K+ L ++L + ++T E + + L + D+ G+
Sbjct: 1316 ELQGSKVTNEVFFYLMKLPHLLSVDLRYTQVTPEAIESFRKQKPLCEVKCDA-GVLPRWE 1374
Query: 289 --GDEGLVNLTGLCNLKCLELSDTQVG--SSGLRHLSGLTNLESINL-SFTGISDGSLRK 343
GDE + N L + + L G + +L TGIS L+
Sbjct: 1375 PNGDELVKNAKADRAAAAFVLKQGKYVWLDNAKDPLHGDPAILPPHLFKLTGISLEGLKT 1434
Query: 344 LA--------GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF 395
L G +L L L ITD L A T +T L L G +T G +Y
Sbjct: 1435 LTPRDFEIFKGCQNLSDLQLLNMGITDEHLRAFEGTTSITKLKLDGQAVTSKGLSYFSGC 1494
Query: 396 KNLRSLEICGGGLTDAGLTGLVS-----LNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
K L L + D + + S LN+ +RIT A + + L+NL TL +
Sbjct: 1495 KRLTFLSVWATQADDKFIQSIASPDYTYLNLGGTRITDASIAAFESLQNLEMATLNFTGL 1554
Query: 451 TANDIKRLQSRD 462
T I+ L S +
Sbjct: 1555 TDEGIEHLASAE 1566
Score = 59.3 bits (142), Expect = 4e-06, Method: Composition-based stats.
Identities = 63/206 (30%), Positives = 83/206 (40%), Gaps = 42/206 (20%)
Query: 294 VNLTGL--CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
V LTG+ N + L+ D +V SG +LE + L F+ ISD L+ L L L
Sbjct: 1144 VQLTGIEFRNKRDLDAKDFEV-------FSGCRDLEKVRLGFSSISDAHLKPLENLPKLT 1196
Query: 352 SLNLDARQITDTGLAALTSLTGLTHL-----------------------DLFGARITDSG 388
L L Q AA+ LTHL DL G RIT
Sbjct: 1197 HLELS--QCEKVTGAAIRKFKHLTHLEAWAVPVGDDDLAPLKDNPFRNLDLGGTRITGKA 1254
Query: 389 AAYLRNFKNLRSLEICGGGLTDAGLTGL------VSLNVSNSRITSAGLRHLKPLKNLRS 442
A N +LRS + + + L L L + N+ I G+R + LK LRS
Sbjct: 1255 LAAFTNLSDLRSSRLAFTSIKNKDLAALKDCHRLTFLALYNTGIGDEGVREICELKALRS 1314
Query: 443 LTLESCKVTANDIKRLQSRDLPNLVS 468
L L+ KVT L LP+L+S
Sbjct: 1315 LELQGSKVTNEVFFYLMK--LPHLLS 1338
>gi|320166209|gb|EFW43108.1| ephrin type-B receptor 3 [Capsaspora owczarzaki ATCC 30864]
Length = 1219
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 157/379 (41%), Gaps = 31/379 (8%)
Query: 76 HLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
HL D ++L FN QI+ GL+ LT L NN IT FA L L +
Sbjct: 54 HLGD----RTLSFN---QITSISANAFAGLTALTDLQLNNNN-ITIIPDYTFANLPALTE 105
Query: 136 LDL--ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
L L T I + GL L LN C IT + L+ L ++Q+S +++T
Sbjct: 106 LHLFFNPITSISAN--SFAGLTVLNLLNSYNCQ-ITSIAANAFTDLSKLTNMQMSGNQIT 162
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGS 253
G+ L +L L G +T+ + + L +L YL+L+ Q+S F + +
Sbjct: 163 SIAPNVFSGMSALKILYLNGNQITSISASAFTGLTALTYLSLDSNQISSIALNAFPGMSA 222
Query: 254 LKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVG 313
LK+L L N+IT L+ L+ L L+ I TGL L L L Q+
Sbjct: 223 LKILRLNINQITGISAGVFTDLSALKELWLNDNQITSISANAFTGLTALTFLRLYVNQIT 282
Query: 314 SSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 373
S + L L ++ LS I+ S GL++L L LDA QIT A T L
Sbjct: 283 SISPGAFTDLGALTTLILSTNKITSISENAFTGLTALTFLQLDANQITSISAGAFTDLGA 342
Query: 374 LTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRH 433
LT L L IT I T GLT L +L + +++ S
Sbjct: 343 LTTLILSINTITS----------------ISANAFT--GLTALTALYLQQNQLDSISAIA 384
Query: 434 LKPLKNLRSLTLESCKVTA 452
L LR L L+ +T+
Sbjct: 385 FTGLTALRELWLQVNLITS 403
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 121/284 (42%), Gaps = 6/284 (2%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGL--INLVKLDLERCTRIHGGLVN 150
QI+ LS LT++ N IT+ F+G+ + ++ L+ + T I
Sbjct: 136 QITSIAANAFTDLSKLTNMQMS-GNQITSIAPNVFSGMSALKILYLNGNQITSISASA-- 192
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
GL L L++ N I+ + G++ LK L+++ +++T L L L
Sbjct: 193 FTGLTALTYLSLD-SNQISSIALNAFPGMSALKILRLNINQITGISAGVFTDLSALKELW 251
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
L +T+ ++ + L +L +L L Q++ F+ +G+L L L N+IT
Sbjct: 252 LNDNQITSISANAFTGLTALTFLRLYVNQITSISPGAFTDLGALTTLILSTNKITSISEN 311
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
GLT L L LD+ I T L L L LS + S +GLT L ++
Sbjct: 312 AFTGLTALTFLQLDANQITSISAGAFTDLGALTTLILSINTITSISANAFTGLTALTALY 371
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 374
L + S GL++L+ L L IT A + LT L
Sbjct: 372 LQQNQLDSISAIAFTGLTALRELWLQVNLITSISANAFSDLTTL 415
>gi|300697280|ref|YP_003747941.1| leucine-rich-repeat type III effector protein (GALA2) [Ralstonia
solanacearum CFBP2957]
gi|299074004|emb|CBJ53541.1| leucine-rich-repeat type III effector protein (GALA2) [Ralstonia
solanacearum CFBP2957]
Length = 1051
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 158/354 (44%), Gaps = 7/354 (1%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
+ D+ + +AS +SL S++LSG+ + D+G L + L SL+ + I D G++ L
Sbjct: 685 IGDREVQALASS-ASLTSLNLSGNRIGDAGAQALGRNTVLTSLNVS-ANPIGDTGVQALA 742
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
G +LTSL R I G+ A A L LD+ L L SL
Sbjct: 743 GSRSLTSLELR-GIRIGEAGIAALASNTVLRSLDISSNDLSEQSAAELARNQTLTSLKAN 801
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
C +T+ + L+ + +L++L++ + + D+G+ + L LNL P+T L
Sbjct: 802 DCG-LTNGMAQQLARIRSLRTLEVGSNSIGDTGVLAIARNASLRTLNLSHNPITLQGLRP 860
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
L +L L+++R D G SK +L L LGFN I L L SL+L
Sbjct: 861 LELSRTLTSLDVSRIGCGDRGALLLSKNRALTSLKLGFNGIGSAGAQGLTANRTLISLDL 920
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
I L L L +SD ++ L+ L ++++S +S + R
Sbjct: 921 RGNTIDVAAATALAHTGRLGSLNVSDCKLDDEAASALAESLTLTALDVSMNRLSSQAARA 980
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
LAG ++L SLN+ I G AL T LT LD AR D G A R +N
Sbjct: 981 LAGNATLTSLNISHNHIGPDGAQALAESTSLTFLD---ARANDIGEAGARALEN 1031
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 181/411 (44%), Gaps = 30/411 (7%)
Query: 58 SLLSVDLSG---SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
S+ +DLSG + V+++GL L L SLD + +I D ++ L ++LTSL+
Sbjct: 648 SVRHLDLSGCTGAAVSEAGLADLAR-RPLASLDLSRT-RIGDREVQALASSASLTSLNLS 705
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N I G +A L L++ G+ L G L SL ++ I ++ +
Sbjct: 706 -GNRIGDAGAQALGRNTVLTSLNVSANPIGDTGVQALAGSRSLTSLELRGIR-IGEAGIA 763
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L+ T L+SL IS + +++ A L Q LT L C +T L+ + SL L
Sbjct: 764 ALASNTVLRSLDISSNDLSEQSAAELARNQTLTSLKANDCGLTNGMAQQLARIRSLRTLE 823
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
+ + D G ++ SL+ LNL N IT + L L+ L SL++ G GD G +
Sbjct: 824 VGSNSIGDTGVLAIARNASLRTLNLSHNPITLQGLRPLELSRTLTSLDVSRIGCGDRGAL 883
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
L+ L L+L +GS+G + L+ L S++L I + LA L SLN
Sbjct: 884 LLSKNRALTSLKLGFNGIGSAGAQGLTANRTLISLDLRGNTIDVAAATALAHTGRLGSLN 943
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT 414
+ ++ D +AL LT LD+ R++ A L AG
Sbjct: 944 VSDCKLDDEAASALAESLTLTALDVSMNRLSSQAARAL------------------AGNA 985
Query: 415 GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 465
L SLN+S++ I G + L S +L ANDI +R L N
Sbjct: 986 TLTSLNISHNHIGPDGAQALA-----ESTSLTFLDARANDIGEAGARALEN 1031
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 132/294 (44%), Gaps = 36/294 (12%)
Query: 161 NIKWCNC--ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK-LTLLNLEGCPVT 217
N W + +T D L L N +L+ S S I L+ L + L+L GC
Sbjct: 602 NAAWASTKHLTVWDKAALGRLQNYPALE-SLSFHGHLSIEDLRALPPSVRHLDLSGCTGA 660
Query: 218 AACLDSLSALG--SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
A L+ L L L+L+R ++ D + + SL LNL N I D L
Sbjct: 661 AVSEAGLADLARRPLASLDLSRTRIGDREVQALASSASLTSLNLSGNRIGDAGAQALGRN 720
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 335
T L SLN+ + IGD G+ L G +L LEL ++G +G+ L+ T L S+++S
Sbjct: 721 TVLTSLNVSANPIGDTGVQALAGSRSLTSLELRGIRIGEAGIAALASNTVLRSLDISSND 780
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF 395
+S+ S +LA +L SL + D GL T+ A L
Sbjct: 781 LSEQSAAELARNQTLTSL-----KANDCGL-------------------TNGMAQQLARI 816
Query: 396 KNLRSLEICGGGLTDAGL------TGLVSLNVSNSRITSAGLRHLKPLKNLRSL 443
++LR+LE+ + D G+ L +LN+S++ IT GLR L+ + L SL
Sbjct: 817 RSLRTLEVGSNSIGDTGVLAIARNASLRTLNLSHNPITLQGLRPLELSRTLTSL 870
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 139/320 (43%), Gaps = 30/320 (9%)
Query: 14 LVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSG 73
L SR LT + L R + + + +AS + L S+D+S +D+++
Sbjct: 741 LAGSRSLTSLELRGIR--------------IGEAGIAALASN-TVLRSLDISSNDLSEQS 785
Query: 74 LIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINL 133
L L SL N C +++G + L + +L +L +N+I G+ A A +L
Sbjct: 786 AAELARNQTLTSLKANDC-GLTNGMAQQLARIRSLRTLEVG-SNSIGDTGVLAIARNASL 843
Query: 134 VKLDLERCTRIHGGLVNLKGLMKLE------SLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L+L + L+GL LE SL++ C D LS L SL++
Sbjct: 844 RTLNLSHNP------ITLQGLRPLELSRTLTSLDVSRIGC-GDRGALLLSKNRALTSLKL 896
Query: 188 SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEK 247
+ + +G L + L L+L G + A +L+ G L LN++ C+L D+
Sbjct: 897 GFNGIGSAGAQGLTANRTLISLDLRGNTIDVAAATALAHTGRLGSLNVSDCKLDDEAASA 956
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL 307
++ +L L++ N ++ + L G L SLN+ IG +G L +L L+
Sbjct: 957 LAESLTLTALDVSMNRLSSQAARALAGNATLTSLNISHNHIGPDGAQALAESTSLTFLDA 1016
Query: 308 SDTQVGSSGLRHLSGLTNLE 327
+G +G R L T ++
Sbjct: 1017 RANDIGEAGARALENNTRMQ 1036
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 118/256 (46%), Gaps = 51/256 (19%)
Query: 197 IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 256
++ L LT L L+G +T A L +L A +L +L+L+ C GS K
Sbjct: 99 LSELHHYPNLTSLQLKGN-LTLADLKALPA--TLRHLDLSAC------------TGSAK- 142
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
+ E + +L GL LESLN+ IGD G L +L+ L ++ +G++G
Sbjct: 143 --------SSEAIAYLAGLP-LESLNVAGADIGDGGARLLAANPSLRALNAANGGIGAAG 193
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
R L+ L S++LS GI D R LAG SL +L + +TD G AL LT
Sbjct: 194 ARALAESPVLTSLDLSQNGIGDEGARALAGSRSLTNLAVLNCLVTDVGARALAGNRTLTA 253
Query: 377 LDLFGARITDSG-----AAYLRNF--------------KNLRSLEICGGGLTDAGLTGLV 417
LDL G IT++G AAY R ++L SL I G DAG+ L
Sbjct: 254 LDL-GNLITETGNELEQAAYDRTANEITAQGAWALAQNRSLTSLSIQGNLCGDAGVQALA 312
Query: 418 ------SLNVSNSRIT 427
SLNV+ + +T
Sbjct: 313 GSSTLTSLNVAYTDMT 328
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 16/165 (9%)
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 364
L + D + +RHL L+ +S G++D + R LA SL+L +I D
Sbjct: 637 LSIEDLRALPPSVRHLD-LSGCTGAAVSEAGLADLARRPLA------SLDLSRTRIGDRE 689
Query: 365 LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL------VS 418
+ AL S LT L+L G RI D+GA L L SL + + D G+ L S
Sbjct: 690 VQALASSASLTSLNLSGNRIGDAGAQALGRNTVLTSLNVSANPIGDTGVQALAGSRSLTS 749
Query: 419 LNVSNSRITSAGLRHLKPLKNLRSLTLES---CKVTANDIKRLQS 460
L + RI AG+ L LRSL + S + +A ++ R Q+
Sbjct: 750 LELRGIRIGEAGIAALASNTVLRSLDISSNDLSEQSAAELARNQT 794
>gi|222617264|gb|EEE53396.1| hypothetical protein OsJ_36445 [Oryza sativa Japonica Group]
Length = 625
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 225/474 (47%), Gaps = 56/474 (11%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGS-DVTDSGLIHLKDCSNLQSLDFNFC 91
++ +CL + GV + +D + + L +VDLS D L + L+ L C
Sbjct: 73 VRRVCLARASGVGWRGLDALVAACPRLEAVDLSHCVGAGDREAAALAAATGLRELSLEKC 132
Query: 92 IQISDGGLEHLR-GLSNLTSLSFRRNNAITAQGMKAFAGLIN-LVKLDLERCTRIHGGLV 149
+ ++D GL + G L LS + I+ G+ + + L LD+ + L
Sbjct: 133 LGVTDMGLAKVVVGCPRLEKLSLKWCREISDIGIDLLSKKCHELRSLDISYLKVGNESLR 192
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQIS-CSKVTDSGIA--------- 198
++ L KLE L + C+CI D ++ L G +L+S+ +S C VT G+A
Sbjct: 193 SISSLEKLEELAMVCCSCIDDDGLELLGKGSNSLQSVDVSRCDHVTSQGLASLIDGHNFL 252
Query: 199 ---------------YLKGLQKL----TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ 239
+L L KL T+L L+G V+++ L ++ +L + L++C
Sbjct: 253 QKLNAADSLHEMRQSFLSNLAKLKDTLTVLRLDGLEVSSSVLLAIGGCNNLVEIGLSKCN 312
Query: 240 -LSDDGCEKF-SKIGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDSCG-IGDEGLV 294
++D+G ++ L+V++L N +T+ L + + +E L L+SC I ++GL
Sbjct: 313 GVTDEGISSLVTQCSHLRVIDLTCCNLLTNNALDSIAENCKMVEHLRLESCSSISEKGLE 372
Query: 295 NLTGLC-NLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKS 352
+ C NLK ++L+D V + L+HL+ + L + L + ISD L ++ S K
Sbjct: 373 QIATSCPNLKEIDLTDCGVNDAALQHLAKCSELLVLKLGLCSSISDKGLAFISS-SCGKL 431
Query: 353 LNLDARQ---ITDTGLAALTS-LTGLTHLDL-FGARITDSGAAYLRNFKNLRSLE----- 402
+ LD + ITD GLAAL + + L+L + +ITDSG +L + + L +LE
Sbjct: 432 IELDLYRCNSITDDGLAALANGCKKIKMLNLCYCNKITDSGLGHLGSLEELTNLELRCLV 491
Query: 403 -ICGGGLTDA--GLTGLVSLNVSNSR-ITSAGLRHLKPLK-NLRSLTLESCKVT 451
I G G++ G L+ +++ + AGL L NLR LT+ C+VT
Sbjct: 492 RITGIGISSVAIGCKNLIEIDLKRCYSVDDAGLWALARYALNLRQLTISYCQVT 545
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 32/230 (13%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL- 102
+++K ++ IA+ +L +DL+ V D+ L HL CS L L C ISD GL +
Sbjct: 366 ISEKGLEQIATSCPNLKEIDLTDCGVNDAALQHLAKCSELLVLKLGLCSSISDKGLAFIS 425
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
L L R N+IT G+ A A G K++ LN+
Sbjct: 426 SSCGKLIELDLYRCNSITDDGLAALA-----------------------NGCKKIKMLNL 462
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISC-SKVTDSGIAYLK-GLQKLTLLNLEGC-PVTAA 219
+CN ITDS + L L L +L++ C ++T GI+ + G + L ++L+ C V A
Sbjct: 463 CYCNKITDSGLGHLGSLEELTNLELRCLVRITGIGISSVAIGCKNLIEIDLKRCYSVDDA 522
Query: 220 CLDSLSALG-SLFYLNLNRCQLSDDG-CEKFSKIGSL---KVLNLGFNEI 264
L +L+ +L L ++ CQ++ G C S + L K+++L + I
Sbjct: 523 GLWALARYALNLRQLTISYCQVTGLGLCHLLSSLRCLQDVKMVHLSWVSI 572
>gi|343420997|emb|CCD18942.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 623
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 135/406 (33%), Positives = 199/406 (49%), Gaps = 40/406 (9%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
+DV+ LI SNL++LD + C I+D + L +SNL S+ IT +
Sbjct: 214 TDVSPLSLI-----SNLRTLDLSHCTGITD--VLPLSLMSNLCSVYLSHCTGIT--DVPP 264
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
+ L L L+L CT I + L L +LE+LN+ +C ITD + PLS ++NL SL
Sbjct: 265 LSKLSRLETLNLMYCTGI-TDVSPLSKLSRLETLNLMYCTGITD--VSPLSLMSNLCSLY 321
Query: 187 IS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGC 245
+S C+ +TD + L L +L LNL C + LS + L L+++ C D
Sbjct: 322 LSHCTGITD--VPPLSKLSRLETLNLMYCTGITD-VSPLSLMSRLEMLDVSGCTGITD-V 377
Query: 246 EKFSKIGSLKVLNLGF-NEITD-ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
S + +L+ L+L + ITD L + L NL + L S I D L L + L+
Sbjct: 378 SPLSDLSNLRTLDLSYCTGITDVSPLSEIIELANLYMIGLTS--ITDVSL--LKKVKKLE 433
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDARQITD 362
L LS + + LS L+ LE ++L + TGI+D S L+ LS L+ LD R T
Sbjct: 434 VLYLSGCT-SITDVSPLSTLSGLEKLDLRYCTGITDVS--PLSTLSGLE--KLDLRYCTG 488
Query: 363 -TGLAALTSLTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEI--CGGGLTDA----GLT 414
T ++ L++L+GL LDL G ITD + L L +L++ C G ++D L
Sbjct: 489 ITDVSPLSTLSGLGKLDLSGCTGITD--VSPLSTLSRLETLDLSECPGVMSDVDSLCSLR 546
Query: 415 GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
L L +S I A LR + LK LR+L L C D+ L +
Sbjct: 547 MLRELRLSRLAINDAVLRDIVVLKCLRTLDLSHCT-DVTDVSPLST 591
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 182/354 (51%), Gaps = 38/354 (10%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
+DV+ LI SNL++LD + C I+D + L +SNL S+ IT +
Sbjct: 7 TDVSPLSLI-----SNLRTLDLSHCTGITD--VLPLSLMSNLCSVYLSHCTGIT--DVPP 57
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
+ L L L+L CT I + L L +LE+LN+ +C IT D+ PLS L+ L++L
Sbjct: 58 LSKLSRLETLNLMYCTGI-TDVSPLSKLSRLETLNLMYCTGIT--DVSPLSKLSRLETLN 114
Query: 187 -ISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGC 245
+ C+ +TD ++ L + L L+L C L LS + +L L L+ C D
Sbjct: 115 LMYCTGITD--VSPLSLISNLRTLDLSHCTGITDVL-PLSLMSNLCSLYLSHCTGITD-V 170
Query: 246 EKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLK 303
SK+ L+ LNL + ITD + L L+ LE+LNL C GI D ++L NL+
Sbjct: 171 PPLSKLSRLETLNLMYCTGITD--VSPLSKLSRLETLNLMYCTGITDVSPLSLIS--NLR 226
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDARQITD 362
L+LS G + + LS ++NL S+ LS TGI+D + L+ LS L++LNL +
Sbjct: 227 TLDLSHCT-GITDVLPLSLMSNLCSVYLSHCTGITD--VPPLSKLSRLETLNL----MYC 279
Query: 363 TGLAALTSLTGLTHLD----LFGARITDSGAAYLRNFKNLRSLEICG-GGLTDA 411
TG+ ++ L+ L+ L+ ++ ITD + L NL SL + G+TD
Sbjct: 280 TGITDVSPLSKLSRLETLNLMYCTGITD--VSPLSLMSNLCSLYLSHCTGITDV 331
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 124/251 (49%), Gaps = 40/251 (15%)
Query: 62 VDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGG-----LE----HLRGLSNLTSL 111
+D+SG + +TD L D SNL++LD ++C I+D +E ++ GL+++T +
Sbjct: 366 LDVSGCTGITDVS--PLSDLSNLRTLDLSYCTGITDVSPLSEIIELANLYMIGLTSITDV 423
Query: 112 SFRR----------NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLN 161
S + + + + + L L KLDL CT I + L L LE L+
Sbjct: 424 SLLKKVKKLEVLYLSGCTSITDVSPLSTLSGLEKLDLRYCTGI-TDVSPLSTLSGLEKLD 482
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC 220
+++C ITD + PLS L+ L L +S C+ +TD ++ L L +L L+L CP +
Sbjct: 483 LRYCTGITD--VSPLSTLSGLGKLDLSGCTGITD--VSPLSTLSRLETLDLSECPGVMSD 538
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITD----------ECL 269
+DSL +L L L L+R ++D + L+ L+L ++TD E L
Sbjct: 539 VDSLCSLRMLRELRLSRLAINDAVLRDIVVLKCLRTLDLSHCTDVTDVSPLSTVIRLEVL 598
Query: 270 VHLKGLTNLES 280
V L+G T L S
Sbjct: 599 V-LRGYTGLRS 608
>gi|332661885|ref|YP_004451355.1| small GTP-binding protein [Haliscomenobacter hydrossis DSM 1100]
gi|332337382|gb|AEE54482.1| small GTP-binding protein [Haliscomenobacter hydrossis DSM 1100]
Length = 1141
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 153/294 (52%), Gaps = 26/294 (8%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
Q+SD L LS L++LSF + + T + ++ + R T L +L+
Sbjct: 191 QVSD-----LDALSALSNLSF-LDLSFTQVSDLSGLSTLSNLSSLNLRDT-YSSDLRSLR 243
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
L+ L L + SD+ L+ L NL SL +S ++V+D ++ L L L+ L+L
Sbjct: 244 PLINLSDLKLSSTEV---SDLSVLAHLHNLSSLHLSYTQVSD--LSALSALSNLSFLDLS 298
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
V+ L +LSAL +L +LNL+ Q+SD + +L +++L E+TD L L
Sbjct: 299 DTQVSD--LSALSALYNLSFLNLSNTQISD--LSALRHLLNLSIIDLSSTELTD--LTTL 352
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
+ L NL S+NL+ D L L+ L NL L LSDTQ +S L LS L NL S+NLS
Sbjct: 353 RHLQNLNSINLNKTHASD--LSALSNLSNLSELYLSDTQ--ASDLSALSALFNLNSLNLS 408
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
+T +S L LA L +L SL+L ++ D L+ L +L L+ LDL + D
Sbjct: 409 YTQVS--GLSALANLQNLSSLDLGDTEVFD--LSPLANLQNLSSLDLSDTEVVD 458
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 170/363 (46%), Gaps = 66/363 (18%)
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITD------------- 170
+ + LI L ++L R TR+ LV L L L L++ + +TD
Sbjct: 129 LYPLSNLIYLKHINLSR-TRL-PNLVTLGHLSNLSFLDLSYTQ-VTDLSDLSTLSNLNSL 185
Query: 171 -------SDMKPLSGLTNLKSLQISCSKVTDSGI--------------AYLKGLQKL-TL 208
SD+ LS L+NL L +S ++V+D Y L+ L L
Sbjct: 186 NLSDTQVSDLDALSALSNLSFLDLSFTQVSDLSGLSTLSNLSSLNLRDTYSSDLRSLRPL 245
Query: 209 LNLEGCPVTAACLDSLSALGSLF---YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
+NL +++ + LS L L L+L+ Q+SD S + +L L+L +++
Sbjct: 246 INLSDLKLSSTEVSDLSVLAHLHNLSSLHLSYTQVSD--LSALSALSNLSFLDLSDTQVS 303
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS-SGLRHLSGLT 324
D L L L NL LNL + I D L L L NL ++LS T++ + LRHL
Sbjct: 304 D--LSALSALYNLSFLNLSNTQISD--LSALRHLLNLSIIDLSSTELTDLTTLRHLQ--- 356
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI 384
NL SINL+ T SD L L+ LS+L L L Q +D L+AL++L L L+L ++
Sbjct: 357 NLNSINLNKTHASD--LSALSNLSNLSELYLSDTQASD--LSALSALFNLNSLNLSYTQV 412
Query: 385 TDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNL 440
SG + L N +NL SL++ + D A L L SL++S++ + L P+ NL
Sbjct: 413 --SGLSALANLQNLSSLDLGDTEVFDLSPLANLQNLSSLDLSDTEVVD-----LSPMINL 465
Query: 441 RSL 443
L
Sbjct: 466 SKL 468
>gi|18568221|gb|AAL75965.1|AF467461_1 PpaA [Danio rerio]
Length = 386
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 162/312 (51%), Gaps = 32/312 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L
Sbjct: 63 RGIKKVQILSLRRSLSYVIQGMP------NIESLNLSGCYNLTDNGLGHAFVQDIPSLRI 116
Query: 160 LNIKWCNCITDSDMKPLSG-LTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGC-P 215
LN+ C ITDS + ++ L NL+ L + CS +T++G+ + GL L LNL C
Sbjct: 117 LNLSLCKQITDSSLGRIAQYLKNLELLDLGGCSNITNTGLLLIAWGLHNLKSLNLRSCRH 176
Query: 216 VTAACLDSLSALG--------SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-NEI 264
V+ + L+ + +L +L L CQ L+D + SK + LK LNL F I
Sbjct: 177 VSDVGIGHLAGMTRSAAEGCLTLEHLTLQDCQKLTDLSLKHISKGLNKLKGLNLSFCGGI 236
Query: 265 TDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRHLS 321
+D ++HL +T L +LNL SC I D G+++L+ G L L++S +VG L +++
Sbjct: 237 SDAGMIHLSHMTQLWTLNLRSCDNISDTGIMHLSMGALRLYGLDVSFCDKVGDQSLAYIA 296
Query: 322 -GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALT-SLTGLTHL 377
GL L+S++L ISD + R + + LK+LN+ +ITD GL + LT LT +
Sbjct: 297 QGLYQLKSLSLCSCHISDDGINRMVRQMHELKTLNIGQCVRITDKGLELIADHLTQLTGI 356
Query: 378 DLFG-ARITDSG 388
DL+G +IT G
Sbjct: 357 DLYGCTKITKRG 368
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 166/320 (51%), Gaps = 50/320 (15%)
Query: 61 SVDLSG-SDVTDSGLIH--LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
S++LSG ++TD+GL H ++D +L+ L+ + C QI+D L +
Sbjct: 89 SLNLSGCYNLTDNGLGHAFVQDIPSLRILNLSLCKQITDSSLGRI--------------- 133
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRI--HGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
AQ +K NL LDL C+ I G L+ GL L+SLN++ C ++D +
Sbjct: 134 ---AQYLK------NLELLDLGGCSNITNTGLLLIAWGLHNLKSLNLRSCRHVSDVGIGH 184
Query: 176 LSGLT--------NLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSL 224
L+G+T L+ L + C K+TD + ++ KGL KL LNL C ++ A + L
Sbjct: 185 LAGMTRSAAEGCLTLEHLTLQDCQKLTDLSLKHISKGLNKLKGLNLSFCGGISDAGMIHL 244
Query: 225 SALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLE 279
S + L+ LNL C +SD G S +G+L++ L++ F +++ D+ L ++ +GL L+
Sbjct: 245 SHMTQLWTLNLRSCDNISDTGIMHLS-MGALRLYGLDVSFCDKVGDQSLAYIAQGLYQLK 303
Query: 280 SLNLDSCGIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTG 335
SL+L SC I D+G+ + + LK L + ++ GL ++ LT L I+L T
Sbjct: 304 SLSLCSCHISDDGINRMVRQMHELKTLNIGQCVRITDKGLELIADHLTQLTGIDLYGCTK 363
Query: 336 ISDGSLRKLAGLSSLKSLNL 355
I+ L ++ L LK NL
Sbjct: 364 ITKRGLERITQLPCLKVFNL 383
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 137/278 (49%), Gaps = 33/278 (11%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEH 101
+ D + IA +L +DL G S++T++GL+ + NL+SL+ C +SD G+ H
Sbjct: 125 ITDSSLGRIAQYLKNLELLDLGGCSNITNTGLLLIAWGLHNLKSLNLRSCRHVSDVGIGH 184
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLES 159
L G++ A G + L L L+ C ++ L ++ KGL KL+
Sbjct: 185 LAGMTR-----------------SAAEGCLTLEHLTLQDCQKLTDLSLKHISKGLNKLKG 227
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGCPVT 217
LN+ +C I+D+ M LS +T L +L + SC ++D+GI +L G +L L++ C
Sbjct: 228 LNLSFCGGISDAGMIHLSHMTQLWTLNLRSCDNISDTGIMHLSMGALRLYGLDVSFCDKV 287
Query: 218 AACLDSLSALGSLFY----LNLNRCQLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVH 271
SL+ + Y L+L C +SDDG + + + LK LN+G ITD+ L
Sbjct: 288 GD--QSLAYIAQGLYQLKSLSLCSCHISDDGINRMVRQMHELKTLNIGQCVRITDKGLEL 345
Query: 272 LK-GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLEL 307
+ LT L ++L C I GL +T L LK L
Sbjct: 346 IADHLTQLTGIDLYGCTKITKRGLERITQLPCLKVFNL 383
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 63/254 (24%)
Query: 272 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 322
++G+ N+ESLNL C G+G + ++ L L C +++D+ +G R
Sbjct: 81 IQGMPNIESLNLSGCYNLTDNGLGHAFVQDIPSLRILNLSLCKQITDSSLG----RIAQY 136
Query: 323 LTNLESINL-SFTGISDGSLRKLA-GLSSLKSLNLDA-RQITDTGLAALTSLT------- 372
L NLE ++L + I++ L +A GL +LKSLNL + R ++D G+ L +T
Sbjct: 137 LKNLELLDLGGCSNITNTGLLLIAWGLHNLKSLNLRSCRHVSDVGIGHLAGMTRSAAEGC 196
Query: 373 -GLTHLDLFG-ARITDSGAAYL-RNFKNLRSLEICG-GGLTDAG------LTGLVSLNV- 421
L HL L ++TD ++ + L+ L + GG++DAG +T L +LN+
Sbjct: 197 LTLEHLTLQDCQKLTDLSLKHISKGLNKLKGLNLSFCGGISDAGMIHLSHMTQLWTLNLR 256
Query: 422 SNSRITSAGLRHL---------------------------KPLKNLRSLTLESCKVTAND 454
S I+ G+ HL + L L+SL+L SC ++ +
Sbjct: 257 SCDNISDTGIMHLSMGALRLYGLDVSFCDKVGDQSLAYIAQGLYQLKSLSLCSCHISDDG 316
Query: 455 IKRL--QSRDLPNL 466
I R+ Q +L L
Sbjct: 317 INRMVRQMHELKTL 330
>gi|281210637|gb|EFA84803.1| hypothetical protein PPL_01796 [Polysphondylium pallidum PN500]
Length = 739
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 162/349 (46%), Gaps = 38/349 (10%)
Query: 153 GLMKLESLNIKWCNCITDSDMKP--LSGLTNLKSLQ-ISCSKVTDSGIAYLKGLQKLTLL 209
G K+E LN+ + + I +D LS + +L+ + ++C TD G+ K ++ LT L
Sbjct: 335 GNAKIEELNLNYQHLIVSNDFLQNCLSRMYHLQKVSLVACFGFTDLGMENFKRMEHLTSL 394
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
L C VT + SL + L L+L +++D G S + LK L+L ITDE +
Sbjct: 395 ILTDCAVTNVSVKSLKQMVKLEELSLRNTKITDSGLTLLSSLVELKFLDLSACNITDEGI 454
Query: 270 VH-LKGLTNLESLNLDSCGIGDEGLVNLTGLC-------------------------NLK 303
+ T LE+LNL + + ++ + LT L LK
Sbjct: 455 TFAIPCFTKLETLNLSATSVTEKAIQKLTKLPLVSLYLSNCPMIGNQSLFFITLFGKTLK 514
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLS-FTGISDGSLRKLAGLSSLKSLNLDARQITD 362
L++ T++G +G +L L NL + L +SD + L L +++ L+L + I
Sbjct: 515 LLDIFGTKIGGAGFVNLQRLPNLTVLKLPGRDSLSDAHISHLNALQNVRRLDL-SDYINI 573
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVS 422
T +A L L L L L +I+D + NL L + + D G++ L+SL++
Sbjct: 574 TTIAPLNPLRYLCELSLSNTKISDDSIDSIIGCSNLVILNLDRTRVRDIGVSKLISLSLH 633
Query: 423 NSRITSAGLRH--LKPLKNLRSLTLESCKVTANDI---KRLQSRDLPNL 466
+ + G+R L L L +TL S +++NDI K L DLPNL
Sbjct: 634 TLSLMATGIRGDCLTTLSQL--ITLTSLNISSNDIQDAKVLPLLDLPNL 680
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 165/344 (47%), Gaps = 20/344 (5%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
+ HL+ +S + F T GM+ F + +L L L C + + +LK ++KLE
Sbjct: 363 MYHLQKVSLVACFGF------TDLGMENFKRMEHLTSLILTDCAVTNVSVKSLKQMVKLE 416
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY-LKGLQKLTLLNLEGCPVT 217
L+++ ITDS + LS L LK L +S +TD GI + + KL LNL VT
Sbjct: 417 ELSLRNTK-ITDSGLTLLSSLVELKFLDLSACNITDEGITFAIPCFTKLETLNLSATSVT 475
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI--GSLKVLNLGFNEITDECLVHLKGL 275
+ L+ L L L L+ C + + F + +LK+L++ +I V+L+ L
Sbjct: 476 EKAIQKLTKL-PLVSLYLSNCPMIGNQSLFFITLFGKTLKLLDIFGTKIGGAGFVNLQRL 534
Query: 276 TNLESLNLD-SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
NL L L + D + +L L N++ L+LSD + + + L+ L L ++LS T
Sbjct: 535 PNLTVLKLPGRDSLSDAHISHLNALQNVRRLDLSDY-INITTIAPLNPLRYLCELSLSNT 593
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
ISD S+ + G S+L LNLD ++ D G++ L SL+ L L L I L
Sbjct: 594 KISDDSIDSIIGCSNLVILNLDRTRVRDIGVSKLISLS-LHTLSLMATGIRGDCLTTLSQ 652
Query: 395 FKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLR 432
L SL I + DA L L +++ N++ +A L+
Sbjct: 653 LITLTSLNISSNDIQDAKVLPLLDLPNLTYIDLRNTQAFTASLK 696
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 134/291 (46%), Gaps = 32/291 (10%)
Query: 55 QGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEH-LRGLSNLTSLSF 113
Q L + L + +TDSGL L L+ LD + C I+D G+ + + L +L+
Sbjct: 411 QMVKLEELSLRNTKITDSGLTLLSSLVELKFLDLSAC-NITDEGITFAIPCFTKLETLNL 469
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERC-------------------------TRIHG-G 147
++T + ++ L LV L L C T+I G G
Sbjct: 470 SA-TSVTEKAIQKLTKL-PLVSLYLSNCPMIGNQSLFFITLFGKTLKLLDIFGTKIGGAG 527
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
VNL+ L L L + + ++D+ + L+ L N++ L +S + + IA L L+ L
Sbjct: 528 FVNLQRLPNLTVLKLPGRDSLSDAHISHLNALQNVRRLDLS-DYINITTIAPLNPLRYLC 586
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
L+L ++ +DS+ +L LNL+R ++ D G K + SL L+L I +
Sbjct: 587 ELSLSNTKISDDSIDSIIGCSNLVILNLDRTRVRDIGVSKLISL-SLHTLSLMATGIRGD 645
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
CL L L L SLN+ S I D ++ L L NL ++L +TQ ++ L+
Sbjct: 646 CLTTLSQLITLTSLNISSNDIQDAKVLPLLDLPNLTYIDLRNTQAFTASLK 696
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 94/233 (40%), Gaps = 42/233 (18%)
Query: 20 LTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKD 79
+TE +++ L L L P + ++ + I G +L +D+ G+ + +G ++L+
Sbjct: 474 VTEKAIQKLTKLPLVSLYLSNCPMIGNQSLFFITLFGKTLKLLDIFGTKIGGAGFVNLQR 533
Query: 80 CSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR----------------------RNN 117
NL L +SD + HL L N+ L N
Sbjct: 534 LPNLTVLKLPGRDSLSDAHISHLNALQNVRRLDLSDYINITTIAPLNPLRYLCELSLSNT 593
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC---------NCI 168
I+ + + G NLV L+L+R TR+ G+ KL SL++ +C+
Sbjct: 594 KISDDSIDSIIGCSNLVILNLDR-TRVRDI-----GVSKLISLSLHTLSLMATGIRGDCL 647
Query: 169 TDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 221
T LS L L SL IS + + D+ + L L LT ++L A L
Sbjct: 648 TT-----LSQLITLTSLNISSNDIQDAKVLPLLDLPNLTYIDLRNTQAFTASL 695
>gi|417399805|gb|JAA46888.1| Putative f-box/lrr-repeat protein 14 [Desmodus rotundus]
Length = 368
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 170/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ +S+L +L+ IT + A + L
Sbjct: 54 IQGMANIESLNLSGCYNLTDNGLGHAFVQEISSLRALNLSLCKQITDSSLGRIAQYLKGL 113
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 114 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 173
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 174 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 233
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 234 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 292
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 293 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYG--CTRITKRGLERITQLP 349
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 350 CLKVLNLGLWQMTDS 364
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 179/371 (48%), Gaps = 54/371 (14%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 36 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEISSLRA 89
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 90 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 147
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-K 273
LS +G + R + +GC +G ++ ++TD L H+ +
Sbjct: 148 R-------HLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTDLSLKHISR 193
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESIN 330
GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L ++
Sbjct: 194 GLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLD 253
Query: 331 LSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITD 386
+SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ RITD
Sbjct: 254 VSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITD 313
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
G LE+ L+ LTG+ +RIT GL + L L+ L L
Sbjct: 314 KG------------LELIAEHLSQ--LTGIDLYGC--TRITKRGLERITQLPCLKVLNLG 357
Query: 447 SCKVTANDIKR 457
++T ++ R
Sbjct: 358 LWQMTDSEKVR 368
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 183 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 242
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 243 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 302
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 303 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 339
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 340 RGLERITQLPCLKVLNLGLWQMTD 363
>gi|428212495|ref|YP_007085639.1| hypothetical protein Oscil6304_2053 [Oscillatoria acuminata PCC
6304]
gi|428000876|gb|AFY81719.1| leucine-rich repeat (LRR) protein [Oscillatoria acuminata PCC 6304]
Length = 455
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 179/373 (47%), Gaps = 41/373 (10%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLN 161
L GL+NL L N + + AGL NL LDL +I + +L L L+ L
Sbjct: 94 LAGLTNLEWLELSYNKI---EDIAPLAGLTNLEWLDL-SYNKIE-DIASLANLNNLKFLA 148
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT-AAC 220
I+ N I D+ PL+ LTNL+ L + +K+ + +A L +LT L+L G + A
Sbjct: 149 IR-DNQI--EDVAPLTNLTNLEVLWLDENKIGE--VASFASLTQLTQLHLSGNQIEDVAP 203
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
L +L+ L SL +LN N+ + + L L L NEI D L LKGL +
Sbjct: 204 LANLTNLESL-WLNENKIK----DVASLVSMTKLTQLYLSSNEIED--LAPLKGLPEMAE 256
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
L L++ I + + L L NL LEL++ Q+ + L+ LT L + L+ I + S
Sbjct: 257 LQLNNNQIVN--VAPLASLTNLTTLELNENQI--KDIAPLASLTQLGFLQLTKNQIVNIS 312
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRS 400
LA L+ L++L L +I D +A L SLT LT L L +I D A L + L S
Sbjct: 313 --PLATLTKLETLQLLYNEIKD--VAPLASLTNLTFLTLGENQIKD--VAPLASLTELTS 366
Query: 401 LEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIK 456
L++ + D A LT L L++S+++I L L L+ L L + ++ DI
Sbjct: 367 LDLSNNEIKDIDPLANLTQLTFLHLSDNQIKDVA--PLASLTQLKHLHLRNNEI--KDIA 422
Query: 457 RLQSRDLPNLVSF 469
R LPNL
Sbjct: 423 R-----LPNLTQM 430
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 147/329 (44%), Gaps = 65/329 (19%)
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
D+ PL+GLTNL+ L++S +K+ D IA L GL L L+L + SL+ L +L
Sbjct: 90 DIAPLAGLTNLEWLELSYNKIED--IAPLAGLTNLEWLDLSYNKIEDIA--SLANLNNLK 145
Query: 232 YLNLNRCQLSDDG--------------------CEKFSKIGSLKVLNLGFNEITDECLVH 271
+L + Q+ D F+ + L L+L N+I D +
Sbjct: 146 FLAIRDNQIEDVAPLTNLTNLEVLWLDENKIGEVASFASLTQLTQLHLSGNQIED--VAP 203
Query: 272 LKGLTNLESLNLDSCGIGD--------------------EGLVNLTGLCNLKCLELSDTQ 311
L LTNLESL L+ I D E L L GL + L+L++ Q
Sbjct: 204 LANLTNLESLWLNENKIKDVASLVSMTKLTQLYLSSNEIEDLAPLKGLPEMAELQLNNNQ 263
Query: 312 VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 371
+ + L+ LTNL ++ L+ I D + LA L+ L L L QI + ++ L +L
Sbjct: 264 I--VNVAPLASLTNLTTLELNENQIKD--IAPLASLTQLGFLQLTKNQIVN--ISPLATL 317
Query: 372 TGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRIT 427
T L L L I D A L + NL L + + D A LT L SL++SN+ I
Sbjct: 318 TKLETLQLLYNEIKD--VAPLASLTNLTFLTLGENQIKDVAPLASLTELTSLDLSNNEI- 374
Query: 428 SAGLRHLKPLKNLRSLTLESCKVTANDIK 456
+ + PL NL LT ++ N IK
Sbjct: 375 ----KDIDPLANLTQLTF--LHLSDNQIK 397
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
D E SK+ L + +EI D + L GLTNLE L L I D + L GL N
Sbjct: 69 DRAQESLSKMTELGIRG---DEIKD--IAPLAGLTNLEWLELSYNKIED--IAPLAGLTN 121
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN---LDAR 358
L+ L+LS ++ ++ L NL NL F I D + +A L++L +L LD
Sbjct: 122 LEWLDLSYNKI-----EDIASLANLN--NLKFLAIRDNQIEDVAPLTNLTNLEVLWLDEN 174
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS 418
+I + +A+ SLT LT L L G +I D A L N NL SL + + D LVS
Sbjct: 175 KIGE--VASFASLTQLTQLHLSGNQIED--VAPLANLTNLESLWLNENKIKDVA--SLVS 228
Query: 419 L-NVSNSRITSAGLRHLKPLKNLRSL 443
+ ++ ++S + L PLK L +
Sbjct: 229 MTKLTQLYLSSNEIEDLAPLKGLPEM 254
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 149/344 (43%), Gaps = 61/344 (17%)
Query: 27 AFRDCALQDLC-LGQYPGVNDKWMDV-----IASQGS--SLLSVDLSGSDVTDSGLIHLK 78
A RD ++D+ L + W+D +AS S L + LSG+ + D L
Sbjct: 148 AIRDNQIEDVAPLTNLTNLEVLWLDENKIGEVASFASLTQLTQLHLSGNQIEDVA--PLA 205
Query: 79 DCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL 138
+ +NL+SL N +I D L ++ LT L N + + GL + +L L
Sbjct: 206 NLTNLESLWLNEN-KIKDVA--SLVSMTKLTQLYLSSNEI---EDLAPLKGLPEMAELQL 259
Query: 139 ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD-SGI 197
+ +VN+ L L +L N D+ PL+ LT L LQ++ +++ + S +
Sbjct: 260 N-----NNQIVNVAPLASLTNLTTLELNENQIKDIAPLASLTQLGFLQLTKNQIVNISPL 314
Query: 198 AYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
A L L+ L LL E + ++ L SL +L L
Sbjct: 315 ATLTKLETLQLLYNE--------IKDVAPLASL---------------------TNLTFL 345
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSCGIGD-EGLVNLTGLCNLKCLELSDTQVGSSG 316
LG N+I D + L LT L SL+L + I D + L NLT L L LSD Q+
Sbjct: 346 TLGENQIKD--VAPLASLTELTSLDLSNNEIKDIDPLANLTQLT---FLHLSDNQI--KD 398
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
+ L+ LT L+ ++L I D + +L L+ + + ++D I
Sbjct: 399 VAPLASLTQLKHLHLRNNEIKD--IARLPNLTQMDNFSVDGNPI 440
>gi|241724224|ref|XP_002413721.1| F-box/LRR-repeat protein, putative [Ixodes scapularis]
gi|215507537|gb|EEC17029.1| F-box/LRR-repeat protein, putative [Ixodes scapularis]
Length = 315
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 171/333 (51%), Gaps = 44/333 (13%)
Query: 157 LESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGC 214
LE L ++ C ++D ++ LS L NL SL +S C VTD+G+ ++ + L L L GC
Sbjct: 1 LEYLGLEDCALVSDLGLEYLSLRLKNLVSLDLSMCLSVTDAGLEHIAKISSLKKLTLLGC 60
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLS---DDGCEKFSKIGSLKVLNLGFNEITDECLVH 271
+ L++ S+F+L R +L+ C + G + ++N G
Sbjct: 61 -------EDLTS-QSMFHLATARFRLNCLIISYCNQIEDTG-IHMINRG----------- 100
Query: 272 LKGLTNLESLNLDSCGIGDEGL-VNLTGLCNLKCLELSDTQ-VGSSGLRHLSG-LTNLES 328
+GL +L +LN+++C I D GL V L +L L +S+ + V G+ ++ L L
Sbjct: 101 -QGLVSLTTLNVNACPITDVGLSVVAEKLRDLTALNISECEYVSKDGISVVAANLRKLRF 159
Query: 329 INLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTG---LTHLDLFGAR 383
IN+ TG+++ SL+ LA +SSL+ +NL +IT G+A + S G + LD+
Sbjct: 160 INMRLCTGLTNISLKHLARMSSLEVINLKGCTKITGKGMAFMASGEGQSSVLELDVSFTS 219
Query: 384 ITDSGAAYL-RNFKNLRSLEICGGGLTDAGLT-------GLVSLNVSN-SRITSAGLRHL 434
I D+G Y+ + + LRSL +CG ++D GLT L +L +S SRIT G++ +
Sbjct: 220 IGDTGLRYIAQGMQKLRSLSLCGCLISDKGLTRIARNLHALNTLKISRCSRITDNGIKVV 279
Query: 435 K-PLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
LK LR + L+ C + KR LP+L
Sbjct: 280 ACNLKRLRQIDLKGCSRITSAGKRSLVVRLPHL 312
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 165/336 (49%), Gaps = 62/336 (18%)
Query: 69 VTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
V+D GL +L NL SLD + C+ ++D GLEH+ +S+L L+ +T+Q M
Sbjct: 12 VSDLGLEYLSLRLKNLVSLDLSMCLSVTDAGLEHIAKISSLKKLTLLGCEDLTSQSMFHL 71
Query: 128 AGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS---GLTNLKS 184
A +L L I +CN I D+ + ++ GL +L +
Sbjct: 72 A-----------------------TARFRLNCLIISYCNQIEDTGIHMINRGQGLVSLTT 108
Query: 185 LQISCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGS----LFYLNLNRCQ 239
L ++ +TD G++ + + L+ LT LN+ C + D +S + + L ++N+ C
Sbjct: 109 LNVNACPITDVGLSVVAEKLRDLTALNISECEYVSK--DGISVVAANLRKLRFINMRLCT 166
Query: 240 -LSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
L++ + +++ SL+V+NL G +IT KG+ + S G G ++
Sbjct: 167 GLTNISLKHLARMSSLEVINLKGCTKITG------KGMAFMAS------GEGQSSVLE-- 212
Query: 298 GLCNLKCLELSDTQVGSSGLRHLS-GLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNL 355
L++S T +G +GLR+++ G+ L S++L ISD L ++A L +L +L +
Sbjct: 213 -------LDVSFTSIGDTGLRYIAQGMQKLRSLSLCGCLISDKGLTRIARNLHALNTLKI 265
Query: 356 D-ARQITDTGLAALT-SLTGLTHLDLFG-ARITDSG 388
+ITD G+ + +L L +DL G +RIT +G
Sbjct: 266 SRCSRITDNGIKVVACNLKRLRQIDLKGCSRITSAG 301
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 7/131 (5%)
Query: 20 LTEVSLEAF-RDCALQDLCLGQYPGVNDKWMDVIAS-QG-SSLLSVDLSGSDVTDSGLIH 76
LT +SL+ R +L+ + L + K M +AS +G SS+L +D+S + + D+GL +
Sbjct: 168 LTNISLKHLARMSSLEVINLKGCTKITGKGMAFMASGEGQSSVLELDVSFTSIGDTGLRY 227
Query: 77 L-KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFA-GLINL 133
+ + L+SL C+ ISD GL + R L L +L R + IT G+K A L L
Sbjct: 228 IAQGMQKLRSLSLCGCL-ISDKGLTRIARNLHALNTLKISRCSRITDNGIKVVACNLKRL 286
Query: 134 VKLDLERCTRI 144
++DL+ C+RI
Sbjct: 287 RQIDLKGCSRI 297
>gi|290979019|ref|XP_002672232.1| predicted protein [Naegleria gruberi]
gi|284085807|gb|EFC39488.1| predicted protein [Naegleria gruberi]
Length = 426
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 143/318 (44%), Gaps = 35/318 (11%)
Query: 176 LSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L + LK L + + S + SG Y+ L++LT L + C L +L SL YL
Sbjct: 28 LDSMKELKKLNLENNSNIHPSGFKYICSLEQLTDLYMTFCYFRLPIAKHLPSLKSLTYLL 87
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG----- 289
+ + +G + ++ LK L++ N I E H+ GL L LN+ + I
Sbjct: 88 ITGNYIGVEGAKYIGEMKQLKQLHIANNNIGPEGAKHISGLEQLTILNIRANEITVDGAK 147
Query: 290 -------------------DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
DEG ++G+ L L++S +G +G +++S + N+ +N
Sbjct: 148 FISEMKQLTVLNIIGNDICDEGAKFISGMKQLTNLDISVNNIGENGAKYVSEMLNITKLN 207
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
+ F I+D + + L LN+++ I G+ ++S LTHL + I++ A+
Sbjct: 208 IGFNSIND-CVECFGKMKQLTDLNVNSSCIGLCGIVFISSFNQLTHLSIASNSISNYEAS 266
Query: 391 YLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
++ KN+ L+I + D G + L LNVS+ IT G++++ + NL L
Sbjct: 267 HISQMKNVIKLDISDNRIGDNGVQSISEMNQLTELNVSSIDITPIGIQYICKMDNLTYLI 326
Query: 445 LESCKV---TANDIKRLQ 459
+ + AN I ++
Sbjct: 327 IAHNNIGVKGANQISEMK 344
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 142/300 (47%), Gaps = 3/300 (1%)
Query: 94 ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG 153
I G +H+ GL LT L+ R N IT G K + + L L++ G + G
Sbjct: 117 IGPEGAKHISGLEQLTILNIRAN-EITVDGAKFISEMKQLTVLNIIGNDICDEGAKFISG 175
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
+ +L +L+I N I ++ K +S + N+ L I + + D + K +++LT LN+
Sbjct: 176 MKQLTNLDIS-VNNIGENGAKYVSEMLNITKLNIGFNSINDCVECFGK-MKQLTDLNVNS 233
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
+ + +S+ L +L++ +S+ S++ ++ L++ N I D + +
Sbjct: 234 SCIGLCGIVFISSFNQLTHLSIASNSISNYEASHISQMKNVIKLDISDNRIGDNGVQSIS 293
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
+ L LN+ S I G+ + + NL L ++ +G G +S + +L +++
Sbjct: 294 EMNQLTELNVSSIDITPIGIQYICKMDNLTYLIIAHNNIGVKGANQISEMKHLAQLSIYN 353
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
+ D + ++ + L LN+ + +I D G+ AL+ + LT L+ I++ G Y+R
Sbjct: 354 NAVGDEGAKFISEMEQLTFLNIGSNEIGDEGVKALSGMKQLTELNTVDNNISEEGENYIR 413
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 145/326 (44%), Gaps = 3/326 (0%)
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
G +++ + L L NN I +G K +GL L L++ G + + +L
Sbjct: 97 GAKYIGEMKQLKQLHIANNN-IGPEGAKHISGLEQLTILNIRANEITVDGAKFISEMKQL 155
Query: 158 ESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
LNI N I D K +SG+ L +L IS + + ++G Y+ + +T LN+ G
Sbjct: 156 TVLNI-IGNDICDEGAKFISGMKQLTNLDISVNNIGENGAKYVSEMLNITKLNI-GFNSI 213
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 277
C++ + L LN+N + G S L L++ N I++ H+ + N
Sbjct: 214 NDCVECFGKMKQLTDLNVNSSCIGLCGIVFISSFNQLTHLSIASNSISNYEASHISQMKN 273
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
+ L++ IGD G+ +++ + L L +S + G++++ + NL + ++ I
Sbjct: 274 VIKLDISDNRIGDNGVQSISEMNQLTELNVSSIDITPIGIQYICKMDNLTYLIIAHNNIG 333
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
+++ + L L++ + D G ++ + LT L++ I D G L K
Sbjct: 334 VKGANQISEMKHLAQLSIYNNAVGDEGAKFISEMEQLTFLNIGSNEIGDEGVKALSGMKQ 393
Query: 398 LRSLEICGGGLTDAGLTGLVSLNVSN 423
L L +++ G + +N+++
Sbjct: 394 LTELNTVDNNISEEGENYIREMNLTD 419
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 133/286 (46%), Gaps = 11/286 (3%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L +++ G+D+ D G + L +LD + I + G +++ + N+T L+
Sbjct: 150 SEMKQLTVLNIIGNDICDEGAKFISGMKQLTNLDISVN-NIGENGAKYVSEMLNITKLNI 208
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
N+ ++ F + L L++ G+V + +L L+I N I++ +
Sbjct: 209 GFNS--INDCVECFGKMKQLTDLNVNSSCIGLCGIVFISSFNQLTHLSI-ASNSISNYEA 265
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
+S + N+ L IS +++ D+G+ + + +LT LN+ +T + + + +L YL
Sbjct: 266 SHISQMKNVIKLDISDNRIGDNGVQSISEMNQLTELNVSSIDITPIGIQYICKMDNLTYL 325
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+ + G + S++ L L++ N + DE + + L LN+ S IGDEG+
Sbjct: 326 IIAHNNIGVKGANQISEMKHLAQLSIYNNAVGDEGAKFISEMEQLTFLNIGSNEIGDEGV 385
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS-FTGISD 338
L+G+ L L D + G + + +NL+ TGI D
Sbjct: 386 KALSGMKQLTELNTVDNNISEEGENY------IREMNLTDHTGIYD 425
>gi|290994522|ref|XP_002679881.1| leucine rich repeat protein [Naegleria gruberi]
gi|284093499|gb|EFC47137.1| leucine rich repeat protein [Naegleria gruberi]
Length = 340
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 2/229 (0%)
Query: 153 GLMK-LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
G MK L L+I+ C+ I D K +S L L L IS + + G YL L +LT L +
Sbjct: 96 GKMKQLTFLDIRNCSMIDDKGAKYVSALNQLTFLNISQNNIGPEGAKYLSKLDQLTNLKI 155
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGS-LKVLNLGFNEITDECLV 270
+ S+S + L LN++ + +G + S+I S L +L++ N+I++E L
Sbjct: 156 NSNEIGPEGAKSISDMKQLTTLNISNNMIGMEGAKSISEISSQLTILDISSNQISNEGLK 215
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
+ ++ L SL+ + IGD+G L+ L NL+ L++S V +G +S L L ++N
Sbjct: 216 FISEMSQLTSLDTNGNNIGDKGAKYLSELKNLRVLDISKNFVYDNGADLISKLPQLTNLN 275
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
+SF I + L+ + L LN+ I G L + LT L++
Sbjct: 276 ISFNEIGNQGAIYLSKMEKLTILNISNNLIGPAGAKYLGEMQQLTKLNI 324
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 140/293 (47%), Gaps = 21/293 (7%)
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKG-LQKLTLLNLEGCP-VTAACLDSLSALGS 229
D+ P L+N+ ++ + + G +++LT L++ C + +SAL
Sbjct: 66 DLLPSRFLSNIVQFRVCVERKPGEMFYQIIGKMKQLTFLDIRNCSMIDDKGAKYVSALNQ 125
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L +LN+++ + +G + SK+ L L + NEI E + + L +LN+ + IG
Sbjct: 126 LTFLNISQNNIGPEGAKYLSKLDQLTNLKINSNEIGPEGAKSISDMKQLTTLNISNNMIG 185
Query: 290 DEGLVNLTGLC-NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
EG +++ + L L++S Q+ + GL+ +S ++ L S++ + I D + L+ L
Sbjct: 186 MEGAKSISEISSQLTILDISSNQISNEGLKFISEMSQLTSLDTNGNNIGDKGAKYLSELK 245
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL 408
+L+ L++ + D G ++ L LT+L++ I + GA YL
Sbjct: 246 NLRVLDISKNFVYDNGADLISKLPQLTNLNISFNEIGNQGAIYL---------------- 289
Query: 409 TDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSR 461
+ + L LN+SN+ I AG ++L ++ L L + ++ +++ L +
Sbjct: 290 --SKMEKLTILNISNNLIGPAGAKYLGEMQQLTKLNINRNYLSVSELALLNKK 340
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 141/322 (43%), Gaps = 29/322 (9%)
Query: 22 EVSLEAFRDCALQDL--CLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTD-------S 72
E+ E R C QD + Y V+ +WM+VI L + + D S
Sbjct: 16 EIIYEILRSCD-QDFKFIVMNYALVSKQWMNVIQWYSKLELKFEKKREHIDDLLPSRFLS 74
Query: 73 GLIHLKDC----------------SNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++ + C L LD C I D G +++ L+ LT L+ +N
Sbjct: 75 NIVQFRVCVERKPGEMFYQIIGKMKQLTFLDIRNCSMIDDKGAKYVSALNQLTFLNISQN 134
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N I +G K + L L L + G ++ + +L +LNI N I K +
Sbjct: 135 N-IGPEGAKYLSKLDQLTNLKINSNEIGPEGAKSISDMKQLTTLNIS-NNMIGMEGAKSI 192
Query: 177 SGLT-NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
S ++ L L IS +++++ G+ ++ + +LT L+ G + LS L +L L++
Sbjct: 193 SEISSQLTILDISSNQISNEGLKFISEMSQLTSLDTNGNNIGDKGAKYLSELKNLRVLDI 252
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
++ + D+G + SK+ L LN+ FNEI ++ ++L + L LN+ + IG G
Sbjct: 253 SKNFVYDNGADLISKLPQLTNLNISFNEIGNQGAIYLSKMEKLTILNISNNLIGPAGAKY 312
Query: 296 LTGLCNLKCLELSDTQVGSSGL 317
L + L L ++ + S L
Sbjct: 313 LGEMQQLTKLNINRNYLSVSEL 334
>gi|195121256|ref|XP_002005136.1| GI19235 [Drosophila mojavensis]
gi|193910204|gb|EDW09071.1| GI19235 [Drosophila mojavensis]
Length = 545
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 188/371 (50%), Gaps = 62/371 (16%)
Query: 7 SQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG 66
S +FN LV R + +V + + R +L+DL +G +L S++LSG
Sbjct: 209 SPSLFNCLV-RRGIKKVQILSLRR-SLKDLVVGV----------------PALTSLNLSG 250
Query: 67 S-DVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQ 122
+V D L H D NL++LD + C QI+D L + + L NL +L IT
Sbjct: 251 CFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGRIAQHLKNLETLELGGCCNITNT 310
Query: 123 GMKAFA-GLINLVKLDLERCTRIH-GGLVNLKGL--------MKLESLNIKWCNCITDSD 172
G+ A GL L L+L C I G+ +L G ++LE L ++ C ++D
Sbjct: 311 GLLLIAWGLKKLRHLNLRSCWHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEA 370
Query: 173 MKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
+ ++ GLT+LKS+ +S C VTDSG+ +L + KL LNL C D++S +G
Sbjct: 371 LGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC-------DNISDIGMA 423
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDSCGI 288
+ L++ G S I SL V F ++I+D+ L H+ +GL L SL+L+ C I
Sbjct: 424 Y--------LTEGG----SGINSLDV---SFCDKISDQALTHIAQGLYRLRSLSLNQCQI 468
Query: 289 GDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKL 344
D+G++ + L L+ L + +++ GL+ L+ L+NL++I+L T +S + +
Sbjct: 469 TDQGMLKIAKSLHELENLNIGQCSRITDKGLQTLAEDLSNLKTIDLYGCTQLSSKGIDII 528
Query: 345 AGLSSLKSLNL 355
L L+ LNL
Sbjct: 529 MKLPKLQKLNL 539
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 166/329 (50%), Gaps = 36/329 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAF-----AGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
RG+ + LS RR+ G+ A +G N+ ++L H V+L L
Sbjct: 219 RGIKKVQILSLRRSLKDLVVGVPALTSLNLSGCFNVADMNLG-----HAFSVDLPNL--- 270
Query: 158 ESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGC 214
++L++ C ITD+ + ++ L NL++L++ C +T++G+ + GL+KL LNL C
Sbjct: 271 KTLDLSLCKQITDTSLGRIAQHLKNLETLELGGCCNITNTGLLLIAWGLKKLRHLNLRSC 330
Query: 215 PVTA-------ACLDSLSALGSL--FYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A +A G+L YL L CQ LSD+ ++ + SLK +NL F
Sbjct: 331 WHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCV 390
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRH 319
+TD L HL + LE LNL SC I D G+ LT G + L++S ++ L H
Sbjct: 391 SVTDSGLKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTH 450
Query: 320 LS-GLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNL-DARQITDTGLAALTS-LTGLT 375
++ GL L S++L+ I+D + K+A L L++LN+ +ITD GL L L+ L
Sbjct: 451 IAQGLYRLRSLSLNQCQITDQGMLKIAKSLHELENLNIGQCSRITDKGLQTLAEDLSNLK 510
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEI 403
+DL+G +++ G + L+ L +
Sbjct: 511 TIDLYGCTQLSSKGIDIIMKLPKLQKLNL 539
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 130/269 (48%), Gaps = 57/269 (21%)
Query: 202 GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF 261
G+ LT LNL GC A ++ LG F ++L +LK L+L
Sbjct: 239 GVPALTSLNLSGC-FNVADMN----LGHAFSVDL----------------PNLKTLDLSL 277
Query: 262 -NEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLEL-SDTQVGSSG 316
+ITD L + + L NLE+L L C I + GL+ + GL L+ L L S + G
Sbjct: 278 CKQITDTSLGRIAQHLKNLETLELGGCCNITNTGLLLIAWGLKKLRHLNLRSCWHISDQG 337
Query: 317 LRHLSGLTNLES---INLSFTGI------SDGSLRKLA-GLSSLKSLNLD-ARQITDTGL 365
+ HL+G + + + L + G+ SD +L +A GL+SLKS+NL +TD+GL
Sbjct: 338 IGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGL 397
Query: 366 AALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN- 423
L + L L+L I+D G AYL T+ G +G+ SL+VS
Sbjct: 398 KHLARMPKLEQLNLRSCDNISDIGMAYL----------------TEGG-SGINSLDVSFC 440
Query: 424 SRITSAGLRHL-KPLKNLRSLTLESCKVT 451
+I+ L H+ + L LRSL+L C++T
Sbjct: 441 DKISDQALTHIAQGLYRLRSLSLNQCQIT 469
>gi|255523032|ref|ZP_05390004.1| leucine-rich repeat protein [Clostridium carboxidivorans P7]
gi|255513147|gb|EET89415.1| leucine-rich repeat protein [Clostridium carboxidivorans P7]
Length = 676
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 112/346 (32%), Positives = 180/346 (52%), Gaps = 38/346 (10%)
Query: 124 MKAFAG---LINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
+K F+G L NL +L+L R + I+ + LK L+KL+S+++ + SD+ L LT
Sbjct: 170 IKDFSGIENLTNLKQLNL-RESEIND-ISELKNLVKLQSIDLSYNKI---SDISALKNLT 224
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NLK L + +KV D I+ L L L LNL P A N ++
Sbjct: 225 NLKKLNLGNNKVRD--ISVLSKLTNLQELNLGYIPYHDFETPDPEA---------NYNEI 273
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD-EGLVN-LTG 298
SD + +L+ LNLG+ +I D L LKGL NL++L+L I D +VN L
Sbjct: 274 SD--ISALKNLTNLQTLNLGYTKIKD--LNALKGLNNLKTLDLSGNQISDISSIVNVLKE 329
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L +L L LS ++ S + L+ LT+L+ + L+ IS+ + +L GLS+L++L+L +
Sbjct: 330 LTSLNDLNLSTNEI--SNIDELNKLTSLKMLKLNSNKISN--INRLKGLSNLQTLDLSSN 385
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLT 414
QI+DT L L L L+L +I++ G L NL++L + ++D GL+
Sbjct: 386 QISDTA-NTLKELNNLNDLNLSNNQISNIGE--LNKLTNLKALNLYYNKISDISALKGLS 442
Query: 415 GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
L +++S + I+ + + L NLR L L S ++ DI+ L++
Sbjct: 443 NLQMIDLSYNEISDISV--FENLANLRELILLSNPISDVDIQALKN 486
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 116/214 (54%), Gaps = 21/214 (9%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVN 150
+ISD + L+ L+NL +L+ + + A GL NL LDL + + I +
Sbjct: 272 EISD--ISALKNLTNLQTLNL---GYTKIKDLNALKGLNNLKTLDLSGNQISDISSIVNV 326
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
LK L L LN+ N I++ D L+ LT+LK L+++ +K+ S I LKGL L L+
Sbjct: 327 LKELTSLNDLNLS-TNEISNID--ELNKLTSLKMLKLNSNKI--SNINRLKGLSNLQTLD 381
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
L ++ ++L L +L LNL+ Q+S+ G + +K+ +LK LNL +N+I+D +
Sbjct: 382 LSSNQISDTA-NTLKELNNLNDLNLSNNQISNIG--ELNKLTNLKALNLYYNKISD--IS 436
Query: 271 HLKGLTNLESLNLDSCGIGD----EGLVNLTGLC 300
LKGL+NL+ ++L I D E L NL L
Sbjct: 437 ALKGLSNLQMIDLSYNEISDISVFENLANLRELI 470
>gi|290987030|ref|XP_002676226.1| predicted protein [Naegleria gruberi]
gi|284089827|gb|EFC43482.1| predicted protein [Naegleria gruberi]
Length = 298
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 141/297 (47%), Gaps = 9/297 (3%)
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQI--SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
LE+L + I D +K +S L NL+ L I C T G+ + + KLT L +
Sbjct: 1 LENLTFLEISRIGDMGLKYISELKNLRILNIHDPCFTFTRYGLESISEMPKLTCLKVRDL 60
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG 274
+ ++ +S L L+ C L D G E ++ L L L + +
Sbjct: 61 KICNEGVNWISQSTQLTDLDFTTCTL-DQGLESLCEMKRLTSLWLPSCPKYANKVELIGQ 119
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
LT L SLN+ + GI D+ V++ L L L++S Q+ + +S LTNL +N+S+
Sbjct: 120 LTQLTSLNICARGINDQDGVHIKELTQLTELDISLNQIVFETIESISQLTNLIILNMSYC 179
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
I D + LS L+ L + ITD G+ +++ L L LD+ I+ +GA +
Sbjct: 180 NIGDDGACLIGELSQLRELKVLKNLITDAGVISISQLKHLIKLDISNNEISKTGAESISG 239
Query: 395 FKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
+NL L I + D G L+ L SL+ + I+S G++ ++ L+ L SL+L
Sbjct: 240 LRNLTYLNIGYNLIGDEGCDFICDLSLLRSLHADKTGISSEGIKSIRNLRKLTSLSL 296
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 140/304 (46%), Gaps = 13/304 (4%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL-ERC-TRIHGGLVNLKGLMKLESLNI 162
L NLT L R I G+K + L NL L++ + C T GL ++ + KL L +
Sbjct: 1 LENLTFLEISR---IGDMGLKYISELKNLRILNIHDPCFTFTRYGLESISEMPKLTCLKV 57
Query: 163 ---KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
K CN + +S T L L + + D G+ L +++LT L L CP A
Sbjct: 58 RDLKICN----EGVNWISQSTQLTDLDFTTCTL-DQGLESLCEMKRLTSLWLPSCPKYAN 112
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
++ + L L LN+ ++D ++ L L++ N+I E + + LTNL
Sbjct: 113 KVELIGQLTQLTSLNICARGINDQDGVHIKELTQLTELDISLNQIVFETIESISQLTNLI 172
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
LN+ C IGD+G + L L+ L++ + +G+ +S L +L +++S IS
Sbjct: 173 ILNMSYCNIGDDGACLIGELSQLRELKVLKNLITDAGVISISQLKHLIKLDISNNEISKT 232
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
++GL +L LN+ I D G + L+ L L I+ G +RN + L
Sbjct: 233 GAESISGLRNLTYLNIGYNLIGDEGCDFICDLSLLRSLHADKTGISSEGIKSIRNLRKLT 292
Query: 400 SLEI 403
SL +
Sbjct: 293 SLSL 296
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 119/246 (48%), Gaps = 14/246 (5%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+ + G+ + + L LDF C D GLE L + LTSL + + A ++
Sbjct: 62 ICNEGVNWISQSTQLTDLDFTTCTL--DQGLESLCEMKRLTSL-WLPSCPKYANKVELIG 118
Query: 129 GLINLVKLDLERCTRIHGGL-----VNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
L L L++ C R G+ V++K L +L L+I N I ++ +S LTNL
Sbjct: 119 QLTQLTSLNI--CAR---GINDQDGVHIKELTQLTELDISL-NQIVFETIESISQLTNLI 172
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
L +S + D G + L +L L + +T A + S+S L L L+++ ++S
Sbjct: 173 ILNMSYCNIGDDGACLIGELSQLRELKVLKNLITDAGVISISQLKHLIKLDISNNEISKT 232
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
G E S + +L LN+G+N I DE + L+ L SL+ D GI EG+ ++ L L
Sbjct: 233 GAESISGLRNLTYLNIGYNLIGDEGCDFICDLSLLRSLHADKTGISSEGIKSIRNLRKLT 292
Query: 304 CLELSD 309
L LS+
Sbjct: 293 SLSLSN 298
>gi|390335362|ref|XP_003724129.1| PREDICTED: uncharacterized protein LOC100890653 [Strongylocentrotus
purpuratus]
Length = 990
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 182/440 (41%), Gaps = 84/440 (19%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLS 61
+P +++++ EL S L +L F C LQ L L Y ++ + +
Sbjct: 589 VPPTVAERLLTELKKSGHLRPKTLMMFIPCHLQRLALDCYKYTTNELLQTVRPH------ 642
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
IHL SL+ C I+D GL + L L L+ N ++T
Sbjct: 643 -------------IHLS------SLNLASCPLITDQGLLQITSLKKLQHLNLSNNKSLTD 683
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
+ + +L L LE GL + P LTN
Sbjct: 684 KVFQTVQEFSSLTTLLLEGTGVTDAGLETFVAV--------------------PPPNLTN 723
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
L ++ + VTD + +L L KL L LE V + L+ + L L LN++R +L
Sbjct: 724 LS---LNRTNVTDMAVLFLARLSKLKNLGLEQTQVKS--LEHVGHLSQLVSLNVSRNRLQ 778
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
D K ++ LKVL++ H++G+T GDE L L GL
Sbjct: 779 RDALLKLHQVTHLKVLHIS----------HVEGIT------------GDEALTCLQGL-Q 815
Query: 302 LKCLELSDTQVGS-SGLRHLSGLTNLESINLS-FTGISDGSLRKLAGLSSLKSLNLDARQ 359
L L L D + +GL+ ++G++ L SI+L+ ++ I+D + LA ++SL L++ +
Sbjct: 816 LMQLSLPDRHTTTDNGLKCIAGMS-LCSIDLTDYSNITDAGIHHLADMTSLHKLSITNTK 874
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL------ 413
+T G+ L+ LT L L L + D GA + L+ L + +TD L
Sbjct: 875 VTSAGMQYLSGLTELLELHLDRTLVDDEGAKVIGQLTKLQVLSMAETKITDRFLLSNVIN 934
Query: 414 --TGLVSLNVSNSRITSAGL 431
+ LN+S + I+ G+
Sbjct: 935 SCPHISRLNLSRTNISERGI 954
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 143/285 (50%), Gaps = 13/285 (4%)
Query: 43 GVNDKWMDV-IASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEH 101
GV D ++ +A +L ++ L+ ++VTD ++ L S L++L Q LEH
Sbjct: 704 GVTDAGLETFVAVPPPNLTNLSLNRTNVTDMAVLFLARLSKLKNLGLE---QTQVKSLEH 760
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG--GLVNLKGLMKLES 159
+ LS L SL+ RN + + + +L L + I G L L+GL +L
Sbjct: 761 VGHLSQLVSLNVSRNR-LQRDALLKLHQVTHLKVLHISHVEGITGDEALTCLQGL-QLMQ 818
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
L++ + TD+ +K ++G++ L S+ ++ S +TD+GI +L + L L++ VT+
Sbjct: 819 LSLPDRHTTTDNGLKCIAGMS-LCSIDLTDYSNITDAGIHHLADMTSLHKLSITNTKVTS 877
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH--LKGLT 276
A + LS L L L+L+R + D+G + ++ L+VL++ +ITD L+ +
Sbjct: 878 AGMQYLSGLTELLELHLDRTLVDDEGAKVIGQLTKLQVLSMAETKITDRFLLSNVINSCP 937
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS 321
++ LNL I + G+ L+ L L L L T V +HL+
Sbjct: 938 HISRLNLSRTNISERGITVLS-LPYLTLLNLDYTCVSVDCAQHLT 981
>gi|325108218|ref|YP_004269286.1| hypothetical protein Plabr_1653 [Planctomyces brasiliensis DSM
5305]
gi|324968486|gb|ADY59264.1| hypothetical protein Plabr_1653 [Planctomyces brasiliensis DSM
5305]
Length = 1046
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 110/245 (44%), Gaps = 23/245 (9%)
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC 220
++ W NC D D+ LS +L+ + I+ +TD L Q+L + L G +T A
Sbjct: 312 DLDWMNC-NDDDVALLSDCPSLRRVYIASDAITDRAAELLADTQQLRHIRLTGNQLTEAS 370
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
L LS RCQ +++ G I +E L L
Sbjct: 371 LRHLS-----------RCQAE-----------IIELTGRGLKHIPNEIFSQLAKSETLRD 408
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
L L + D+ L L+ L +L+ L Q+ +GL+ L+ + L+ I L +D +
Sbjct: 409 LRLWDTALTDDNLQALSSLTSLRVLCADGHQLTPAGLKQLASMPFLQEIRLPGANWTDET 468
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRS 400
+ L L SL+ ++L IT+ GLA L ++T L +DL G IT+ G A L +L+
Sbjct: 469 IALLQPLKSLRRIDLADSAITNAGLAELANITSLEWIDLQGTDITNQGVAALAALNDLQR 528
Query: 401 LEICG 405
LE+ G
Sbjct: 529 LELRG 533
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 20/230 (8%)
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+L+ +DD S SL+ + + + ITD L L + L + + L
Sbjct: 312 DLDWMNCNDDDVALLSDCPSLRRVYIASDAITDRAAELLADTQQLRHIRLTGNQLTEASL 371
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRH--------LSGLTNLESINLSFTGISDGSLRKLA 345
+L+ C + +EL+ GL+H L+ L + L T ++D +L+ L+
Sbjct: 372 RHLS-RCQAEIIELT-----GRGLKHIPNEIFSQLAKSETLRDLRLWDTALTDDNLQALS 425
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
L+SL+ L D Q+T GL L S+ L + L GA TD A L+ K+LR +++
Sbjct: 426 SLTSLRVLCADGHQLTPAGLKQLASMPFLQEIRLPGANWTDETIALLQPLKSLRRIDLAD 485
Query: 406 GGLTDAGL------TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
+T+AGL T L +++ + IT+ G+ L L +L+ L L +
Sbjct: 486 SAITNAGLAELANITSLEWIDLQGTDITNQGVAALAALNDLQRLELRGTR 535
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 50 DVIASQGSSLLS-------VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
D I + + LL+ + L+G+ +T++ L HL C I+++ GL+H+
Sbjct: 340 DAITDRAAELLADTQQLRHIRLTGNQLTEASLRHLSRCQAE-------IIELTGRGLKHI 392
Query: 103 RG--LSNLTSLSFRRN-----NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLM 155
S L R+ A+T ++A + L +L L + GL L +
Sbjct: 393 PNEIFSQLAKSETLRDLRLWDTALTDDNLQALSSLTSLRVLCADGHQLTPAGLKQLASMP 452
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 215
L+ + + N TD + L L +L+ + ++ S +T++G+A L + L ++L+G
Sbjct: 453 FLQEIRLPGANW-TDETIALLQPLKSLRRIDLADSAITNAGLAELANITSLEWIDLQGTD 511
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI 264
+T + +L+AL +L R +L C + GS L+ F +I
Sbjct: 512 ITNQGVAALAALN-----DLQRLELRGTRCNR----GSWNTLSKPFPDI 551
>gi|334119190|ref|ZP_08493277.1| leucine-rich repeat-containing protein [Microcoleus vaginatus
FGP-2]
gi|333458661|gb|EGK87278.1| leucine-rich repeat-containing protein [Microcoleus vaginatus
FGP-2]
Length = 489
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 26/312 (8%)
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
KL S+ + N +D+KPL LTNL L +S +++ D I L+ L LT L L
Sbjct: 81 AYQKLSSIEELYLNDKKINDIKPLESLTNLTGLVLSDNQIND--IKPLESLTNLTKLYLG 138
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
+ + L +L +L L L+ ++SD + + +L L+L N+ D + L
Sbjct: 139 NNKIKD--IKPLQSLTNLTQLGLHNTRISD--IKPLQSLTNLTKLDLSNNKTLD--IKPL 192
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
+ LTNL L LD+ I D + L L NL L+L Q+ ++ L LTNL S++L
Sbjct: 193 QSLTNLTKLYLDNNKIKD--IKPLESLTNLTHLQLMSNQIK--DIKPLESLTNLTSLHLY 248
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
ISD ++ L L+ L L LD +I+D + L SLT LT + L +I+D L
Sbjct: 249 NNQISD--IKPLESLTKLTWLWLDNNKISD--IKPLKSLTNLTEIKLGSNKISDIKP--L 302
Query: 393 RNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
+ NL SL + ++D LT L SL + N++I + ++ L+ L NL + L +
Sbjct: 303 ESLTNLTSLYLHNNQISDIKPLESLTKLTSLWLINNQI--SDIKPLESLTNLTGIVLSNN 360
Query: 449 KVTANDIKRLQS 460
+++ DIK L+S
Sbjct: 361 RIS--DIKPLES 370
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 180/386 (46%), Gaps = 71/386 (18%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLS--FRRNNAITAQGMKAFAGLINLV 134
+ D L+SL + +SD + ++ L +LT+L+ + NN I + +K L NL
Sbjct: 98 INDIKPLESLTNLTGLVLSDNQINDIKPLESLTNLTKLYLGNNKI--KDIKPLQSLTNLT 155
Query: 135 KLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD 194
+L L TRI SD+KPL LTNL L +S +K D
Sbjct: 156 QLGLHN-TRI--------------------------SDIKPLQSLTNLTKLDLSNNKTLD 188
Query: 195 SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSL 254
I L+ L LT L L+ + + L +L +L +L L Q+ D + + +L
Sbjct: 189 --IKPLQSLTNLTKLYLDNNKIKD--IKPLESLTNLTHLQLMSNQIKD--IKPLESLTNL 242
Query: 255 KVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS 314
L+L N+I+D + L+ LT L L LD+ I D + L L NL ++L ++
Sbjct: 243 TSLHLYNNQISD--IKPLESLTKLTWLWLDNNKISD--IKPLKSLTNLTEIKLGSNKI-- 296
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 374
S ++ L LTNL S+ L ISD ++ L L+ L SL L QI+D + L SLT L
Sbjct: 297 SDIKPLESLTNLTSLYLHNNQISD--IKPLESLTKLTSLWLINNQISD--IKPLESLTNL 352
Query: 375 THLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHL 434
T + L RI+D ++ LE L L L ++N++I + ++ L
Sbjct: 353 TGIVLSNNRISD-----------IKPLE---------SLNKLTLLALTNNQI--SDIKPL 390
Query: 435 KPLKNLRSLTLESCKVTANDIKRLQS 460
+ L NL + L S ++ DIK LQS
Sbjct: 391 ESLTNLTGIVLMSNQI--QDIKPLQS 414
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 146/327 (44%), Gaps = 63/327 (19%)
Query: 79 DCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL 138
D LQSL + + + ++ ++ L +LT+L+ + + + +K L NL L L
Sbjct: 188 DIKPLQSLTNLTKLYLDNNKIKDIKPLESLTNLTHLQLMSNQIKDIKPLESLTNLTSLHL 247
Query: 139 ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIA 198
+ + ++K L L L W + SD+KPL LTNL +++ +K++D
Sbjct: 248 -----YNNQISDIKPLESLTKLTWLWLDNNKISDIKPLKSLTNLTEIKLGSNKISD---- 298
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD-DGCEKFSKIGSLKVL 257
L+SL+ L SL+ L+ Q+SD E +K+ SL ++
Sbjct: 299 -------------------IKPLESLTNLTSLY---LHNNQISDIKPLESLTKLTSLWLI 336
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGL 317
N N+I+D + L+ LTNL + L + I D + L L L L L++ Q+ S +
Sbjct: 337 N---NQISD--IKPLESLTNLTGIVLSNNRISD--IKPLESLNKLTLLALTNNQI--SDI 387
Query: 318 RHLSGLTNLESINLSFTGISD--------------------GSLRKLAGLSSLKSLNLDA 357
+ L LTNL I L I D ++ L L++L L+L+
Sbjct: 388 KPLESLTNLTGIVLMSNQIQDIKPLQSLTNLTLLALTNNKISDIKPLQSLTNLTLLSLEK 447
Query: 358 RQITDTGLAALTSLTGLTHLDLFGARI 384
QI+D + L SLT LT + L G I
Sbjct: 448 NQISD--IKPLESLTNLTEIRLSGNPI 472
>gi|449134939|ref|ZP_21770403.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
gi|448886418|gb|EMB16825.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
Length = 341
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 113/242 (46%), Gaps = 2/242 (0%)
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
D+ +K LS + + L + + D + L L L L + G A S+S L +
Sbjct: 83 DNAVKLLSKTSTVSELFMPAAAWADGTVLRLAALPNLKRLRIYGKEFDDAKAKSISGLPA 142
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L + ++DDG +++ L+ ++L + +TD+ L+ + L L LNL I
Sbjct: 143 LIAVTFQDTSVTDDGASVLAELNELQDISLMNSPVTDKTLIAISTLPKLTKLNLRGTKIT 202
Query: 290 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 349
E ++ L L+ LEL++T G G+ ++ + LE +NL T I + SL+ G +S
Sbjct: 203 GEAFEPISKLP-LEDLELAETDFGPEGMPAIANIEGLEKVNLWLTKIDNESLKAFEGKTS 261
Query: 350 LKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL 408
L +LN+D IT+ + + SL L L L + L+ + L +L + GL
Sbjct: 262 LTALNIDNCPAITEEAIPVIVSLPHLKLLHLGKTSVAPDALPQLKPLQELETLFVTNLGL 321
Query: 409 TD 410
+
Sbjct: 322 EE 323
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 133/308 (43%), Gaps = 37/308 (12%)
Query: 48 WMDVIASQ----GSSLLSVDL---SGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLE 100
W D+ ++ G ++ VDL + SD+ D+ + L S + L F +DG +
Sbjct: 54 WDDIAGAKTKLRGDDVVVVDLREVAESDL-DNAVKLLSKTSTVSEL-FMPAAAWADGTVL 111
Query: 101 HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL 160
L L NL L A+ K+ +GL L+ + + +
Sbjct: 112 RLAALPNLKRLRIYGKEFDDAKA-KSISGLPALIAVTFQDTS------------------ 152
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC 220
+TD L+ L L+ + + S VTD + + L KLT LNL G +T
Sbjct: 153 -------VTDDGASVLAELNELQDISLMNSPVTDKTLIAISTLPKLTKLNLRGTKITGEA 205
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
+ +S L L L L +G + I L+ +NL +I +E L +G T+L +
Sbjct: 206 FEPISKL-PLEDLELAETDFGPEGMPAIANIEGLEKVNLWLTKIDNESLKAFEGKTSLTA 264
Query: 281 LNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
LN+D+C I +E + + L +LK L L T V L L L LE++ ++ G+ +G
Sbjct: 265 LNIDNCPAITEEAIPVIVSLPHLKLLHLGKTSVAPDALPQLKPLQELETLFVTNLGLEEG 324
Query: 340 SLRKLAGL 347
+KL +
Sbjct: 325 PAKKLEAM 332
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 31/259 (11%)
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
D+ + SK ++ L + D ++ L L NL+ L + D +++GL
Sbjct: 83 DNAVKLLSKTSTVSELFMPAAAWADGTVLRLAALPNLKRLRIYGKEFDDAKAKSISGLPA 142
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
L + DT V G L+ L L+ I+L + ++D +L ++ L L LNL +IT
Sbjct: 143 LIAVTFQDTSVTDDGASVLAELNELQDISLMNSPVTDKTLIAISTLPKLTKLNLRGTKIT 202
Query: 362 -----------------------DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 398
G+ A+ ++ GL ++L+ +I + +L
Sbjct: 203 GEAFEPISKLPLEDLELAETDFGPEGMPAIANIEGLEKVNLWLTKIDNESLKAFEGKTSL 262
Query: 399 RSLEICG-GGLTDAGLTGLVS------LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
+L I +T+ + +VS L++ + + L LKPL+ L +L + + +
Sbjct: 263 TALNIDNCPAITEEAIPVIVSLPHLKLLHLGKTSVAPDALPQLKPLQELETLFVTNLGLE 322
Query: 452 ANDIKRLQSRDLPNLVSFR 470
K+L++ PNL F
Sbjct: 323 EGPAKKLEAM-FPNLKRFE 340
>gi|290974952|ref|XP_002670208.1| leucine-rich repeat protein [Naegleria gruberi]
gi|284083764|gb|EFC37464.1| leucine-rich repeat protein [Naegleria gruberi]
Length = 252
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 114/228 (50%), Gaps = 6/228 (2%)
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
Q+ +G + S++ L LN+ NEI D+ + G+ L SLN+ S G+EG +++
Sbjct: 13 QVGVEGAKSISEMKQLTSLNISNNEIGDKGANFISGMKQLTSLNIGSNKFGNEGAKSISE 72
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
+ L L + Q+G G++ +S + L S+++ + GI ++ + L SL++
Sbjct: 73 MKQLTVLYIGLNQIGDEGVKFISEMKRLTSVDICYNGIGVKGANSISEMKQLTSLDICLN 132
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG------GGLTDAG 412
QI D G +++ L LT L + +I D GA + K L SL I G + +
Sbjct: 133 QIGDEGAKSISELEQLTLLYISANQIGDEGAKSISELKQLTSLAISANQIGVKGAESISE 192
Query: 413 LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
L L SL S ++I + G++ + +K L SL + + ++ A + L S
Sbjct: 193 LKQLTSLAASANQIGAEGVKFISEMKQLTSLDIGNNRIGAEGVTLLTS 240
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 119/256 (46%), Gaps = 24/256 (9%)
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
+CN + K +S + L SL IS +++ D G ++ G+++LT
Sbjct: 10 YCNQVGVEGAKSISEMKQLTSLNISNNEIGDKGANFISGMKQLT---------------- 53
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
LN+ + ++G + S++ L VL +G N+I DE + + + L S+++
Sbjct: 54 --------SLNIGSNKFGNEGAKSISEMKQLTVLYIGLNQIGDEGVKFISEMKRLTSVDI 105
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
GIG +G +++ + L L++ Q+G G + +S L L + +S I D +
Sbjct: 106 CYNGIGVKGANSISEMKQLTSLDICLNQIGDEGAKSISELEQLTLLYISANQIGDEGAKS 165
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
++ L L SL + A QI G +++ L LT L +I G ++ K L SL+I
Sbjct: 166 ISELKQLTSLAISANQIGVKGAESISELKQLTSLAASANQIGAEGVKFISEMKQLTSLDI 225
Query: 404 CGGGLTDAGLTGLVSL 419
+ G+T L SL
Sbjct: 226 GNNRIGAEGVTLLTSL 241
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 2/213 (0%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
+I D G + G+ LTSL+ +N +G K+ + + L L + G+ +
Sbjct: 37 EIGDKGANFISGMKQLTSLNIG-SNKFGNEGAKSISEMKQLTVLYIGLNQIGDEGVKFIS 95
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
+ +L S++I + N I +S + L SL I +++ D G + L++LTLL +
Sbjct: 96 EMKRLTSVDICY-NGIGVKGANSISEMKQLTSLDICLNQIGDEGAKSISELEQLTLLYIS 154
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
+ S+S L L L ++ Q+ G E S++ L L N+I E + +
Sbjct: 155 ANQIGDEGAKSISELKQLTSLAISANQIGVKGAESISELKQLTSLAASANQIGAEGVKFI 214
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
+ L SL++ + IG EG+ LT L +LK L
Sbjct: 215 SEMKQLTSLDIGNNRIGAEGVTLLTSLTSLKFL 247
>gi|18413537|emb|CAD21866.1| hypothetical leucine-rich repeat protein 1 (LRRP1) [Trypanosoma
brucei]
Length = 1393
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 212/505 (41%), Gaps = 85/505 (16%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC 91
AL +L L G+N W + Q L LS + +TD + H +C NL +LD +FC
Sbjct: 555 ALNELNLSNCFGINAGWEAIEKLQ--QLHVAILSNTHITDRDISHFSNCKNLITLDLSFC 612
Query: 92 IQISDGGLEHLRGLSNLTSLS-------------------FRRNNAITAQGMKAFAGLI- 131
++ D + LSN+T+L R + +G++ +I
Sbjct: 613 NKLLD-----VTALSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIKGVQLEDSVIV 667
Query: 132 ------NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
+ V+L LE C + G + L L+ LE LN+ +C+ +T S M L L L+ L
Sbjct: 668 SLGNGNSFVRLSLENC-KGFGDVAPLSNLVTLEELNLHYCDKVT-SGMGTLGRLLQLRVL 725
Query: 186 QI--------------------------SCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTA 218
+ +C K+T S IA L L++L N++ C
Sbjct: 726 DLGRTQVDDNSLENICTCSSPLVSLNLSNCKKITSISAIASLTALEEL---NIDNCCNVT 782
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTN 277
+ + L L L+ + +D+ S+ SL LNL F +ITD + L +T
Sbjct: 783 SGWNVFGTLHQLRVATLSNTRTNDENIRHVSECKSLNTLNLAFCKDITD--VTALSKITM 840
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
LE LNLD C +G+ L L + L + + +G + S L N +S+ S
Sbjct: 841 LEELNLDCCHNIRKGIETLGTLPKARILSMKECYMGDGYAQQCSILGNSKSLVKLNLERS 900
Query: 338 DG--SLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
G S++ L+ +++L+ L LD AR++ + S + L L + + TD +N
Sbjct: 901 RGRISVKALSNVATLEELVLDHARKV-----CCIPSFSCLPRLRVLNLKYTDINGDVTKN 955
Query: 395 F---KNLRSLEICG-GGLTDAGLTGLVSL----NVSNSRITSAGLRHLKPLKNLRSLTLE 446
K+LRSL + +TD + + NV+ G L L LR L
Sbjct: 956 ISESKSLRSLNLSHCKWVTDISVLSSLLTLEELNVNCCNGIRKGWESLGKLPLLRVAILS 1015
Query: 447 SCKVTANDIKRLQS-RDLPNLVSFR 470
K+TA DI L S + L L FR
Sbjct: 1016 DTKITAKDIACLSSCKKLVKLKFFR 1040
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 174/387 (44%), Gaps = 43/387 (11%)
Query: 94 ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG 153
I + HL + L L+ +T ++ + L NL L+L + +
Sbjct: 189 IDNNDARHLFNIGTLEELAITDTMQLT--NIRGISRLTNLKCLELNSTNIDDSCVRRICA 246
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
+KL L++ CN ITD+ P+S L+ L+ L +S +T GI L L +L +L+L G
Sbjct: 247 CVKLSKLSVSECNNITDA--TPISQLSALEELNLSNCHIT-KGIGTLGMLLRLRILDLSG 303
Query: 214 CPVTAACLDSLSALGSLFYLNLN-RCQLSD---------------DGCEKFSK------- 250
PV CL L GSL LN++ R QL+D +GC + ++
Sbjct: 304 VPVEDNCLKDLCDCGSLERLNISYRIQLTDINPLSNATAIEELNLNGCRRITRGIGVVWA 363
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD 309
+ L+VL++ +++ L + L ++LD+C G GD L L+ + L+ L +
Sbjct: 364 LPKLRVLHMKDVHLSEPSLDSVGTGGPLVKVSLDNCAGFGDMTL--LSSIVTLEELNIQK 421
Query: 310 TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD-TGLAAL 368
SG+ L L L +N+ IS + SL LN+++ IT + + AL
Sbjct: 422 CADIISGVGCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNMES--ITGLSNVEAL 479
Query: 369 TSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL------VSLNVS 422
++ L L L G D+G L N L+ L++ G + L L VSLN+S
Sbjct: 480 ANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTVVSLNLS 539
Query: 423 NS-RITSAGLRHLKPLKNLRSLTLESC 448
+ ++T+ H+ L+ L L L +C
Sbjct: 540 HCWKMTNVS--HISSLEALNELNLSNC 564
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 180/412 (43%), Gaps = 41/412 (9%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ ++L ++L+ +++ DS + + C L L + C I+D + LS L L+
Sbjct: 221 SRLTNLKCLELNSTNIDDSCVRRICACVKLSKLSVSECNNITDA--TPISQLSALEELNL 278
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
+N +G+ L+ L LDL L +L LE LNI + I +D+
Sbjct: 279 --SNCHITKGIGTLGMLLRLRILDLSGVPVEDNCLKDLCDCGSLERLNISYR--IQLTDI 334
Query: 174 KPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
PLS T ++ L ++ C ++T GI + L KL +L+++ ++ LDS+ G L
Sbjct: 335 NPLSNATAIEELNLNGCRRIT-RGIGVVWALPKLRVLHMKDVHLSEPSLDSVGTGGPLVK 393
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
++L+ C GF ++T L + LE LN+ C G
Sbjct: 394 VSLDNCA--------------------GFGDMT-----LLSSIVTLEELNIQKCADIISG 428
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAGLSSLK 351
+ L L L+ L + + + S + +L +N+ S TG+S+ + LA + +L+
Sbjct: 429 VGCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNMESITGLSN--VEALANILTLE 486
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG-GGLTD 410
L+L D G+ L +L L LDL G + L + + SL + +T+
Sbjct: 487 KLSLHGCTGIDAGIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTVVSLNLSHCWKMTN 546
Query: 411 ----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
+ L L LN+SN +AG ++ L+ L L + +T DI
Sbjct: 547 VSHISSLEALNELNLSNCFGINAGWEAIEKLQQLHVAILSNTHITDRDISHF 598
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 187/472 (39%), Gaps = 105/472 (22%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
+DLSG V D+ L L DC +L+ L+ ++ IQ++D + LSN T++
Sbjct: 299 LDLSGVPVEDNCLKDLCDCGSLERLNISYRIQLTD-----INPLSNATAIE--------- 344
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC---------------- 165
+L+L C RI G+ + L KL L++K
Sbjct: 345 -------------ELNLNGCRRITRGIGVVWALPKLRVLHMKDVHLSEPSLDSVGTGGPL 391
Query: 166 ------NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
NC DM LS + L+ L I SG+ L L L +LN++ +++
Sbjct: 392 VKVSLDNCAGFGDMTLLSSIVTLEELNIQKCADIISGVGCLGTLPYLRVLNIKEAHISSL 451
Query: 220 CLDSLSALGSLFYLN-----------------------LNRCQLSDDGCEKFSKIGSLKV 256
+ A SL LN L+ C D G + LK+
Sbjct: 452 DFTGIGASKSLLQLNMESITGLSNVEALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKM 511
Query: 257 LNLGFNEITDECL-----------------------VHLKGLTNLESLNLDSCGIGDEGL 293
L+L +E L H+ L L LNL +C + G
Sbjct: 512 LDLSGTNTDNESLRSLCLSQTVVSLNLSHCWKMTNVSHISSLEALNELNLSNCFGINAGW 571
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKS 352
+ L L LS+T + + H S NL +++LSF + D + L+ +++L+
Sbjct: 572 EAIEKLQQLHVAILSNTHITDRDISHFSNCKNLITLDLSFCNKLLD--VTALSNITTLEE 629
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN---FKNLRSLEICGGGLT 409
LNLD+ GL+ L L L L++ G ++ DS L N F L SLE C G
Sbjct: 630 LNLDSCSNIRKGLSVLGELPRLCVLNIKGVQLEDSVIVSLGNGNSFVRL-SLENCKGFGD 688
Query: 410 DAGLTGLVS---LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
A L+ LV+ LN+ ++G+ L L LR L L +V N ++ +
Sbjct: 689 VAPLSNLVTLEELNLHYCDKVTSGMGTLGRLLQLRVLDLGRTQVDDNSLENI 740
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 139/324 (42%), Gaps = 47/324 (14%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISD-------------------GGLEHLRG 104
LS + +T + L C L L F C ++SD GL+ L
Sbjct: 1014 LSDTKITAKDIACLSSCKKLVKLKFFRCKKLSDVTVVYKIQSLEELIVTSCSDGLKGLNA 1073
Query: 105 LSNLTSLSFR--RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
L L L F RN + +++ +LV+L +E + + L + LE L++
Sbjct: 1074 LGTLPRLRFHHLRNVRGSDISVESIGTSKSLVRLHIEVGEEL-TDITPLSNITSLEELSL 1132
Query: 163 KWCNCITDSDMKP-----LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
+ D P L L LKSL + S+++DS + + + +T LNL+
Sbjct: 1133 R------DYRKPPEGVGTLGKLPRLKSLDLGLSRISDSTLYCICLSRSITSLNLDS-SWK 1185
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD-ECLVHLKGLT 276
+ +S L +L LNL C G + S++ L+VLNL F +T + ++
Sbjct: 1186 LTDISHISNLTALEELNLGGCYYITSGWKALSELPRLRVLNLEFTRVTTRDGGYYISRCK 1245
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVG-----SSGLRHLSGLTNLESINL 331
L +LNL+ C + D + L N+K LE + +G + G L L L +NL
Sbjct: 1246 YLVTLNLELCDMTDA-----SCLANIKTLE--ELHIGGCDELTQGFSALFTLPQLRILNL 1298
Query: 332 SFTGISDGSLRKLAGLSSLKSLNL 355
+ I+D LR++ +++ LNL
Sbjct: 1299 ICSLITDEDLREIQPPHTIEELNL 1322
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 138/545 (25%), Positives = 204/545 (37%), Gaps = 159/545 (29%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISD-------GGLEHL---------RGLSN 107
LS + D + H+ +C +L +L+ FC I+D LE L +G+
Sbjct: 799 LSNTRTNDENIRHVSECKSLNTLNLAFCKDITDVTALSKITMLEELNLDCCHNIRKGIET 858
Query: 108 LTSLSFRRNNAIT--------AQGMKAFAGLINLVKLDLERCT-RI-------------- 144
L +L R ++ AQ +LVKL+LER RI
Sbjct: 859 LGTLPKARILSMKECYMGDGYAQQCSILGNSKSLVKLNLERSRGRISVKALSNVATLEEL 918
Query: 145 ---HGGLV----NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSG 196
H V + L +L LN+K+ + I K +S +L+SL +S C VTD
Sbjct: 919 VLDHARKVCCIPSFSCLPRLRVLNLKYTD-INGDVTKNISESKSLRSLNLSHCKWVTDIS 977
Query: 197 IAY-------------------LKGLQKLTLLN---LEGCPVTAACLDSLSALGSLFYLN 234
+ + L KL LL L +TA + LS+ L L
Sbjct: 978 VLSSLLTLEELNVNCCNGIRKGWESLGKLPLLRVAILSDTKITAKDIACLSSCKKLVKLK 1037
Query: 235 LNRCQ-LSD-------------------DGCEKFSKIGSLKVL------NLGFNEITDEC 268
RC+ LSD DG + + +G+L L N+ ++I+ E
Sbjct: 1038 FFRCKKLSDVTVVYKIQSLEELIVTSCSDGLKGLNALGTLPRLRFHHLRNVRGSDISVES 1097
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE---LSDTQVGSSGLRHLSGLTN 325
+ K L L +G+E L ++T L N+ LE L D + G+ L L
Sbjct: 1098 IGTSKSLVRLH------IEVGEE-LTDITPLSNITSLEELSLRDYRKPPEGVGTLGKLPR 1150
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDAR-QITD---------------------- 362
L+S++L + ISD +L + S+ SLNLD+ ++TD
Sbjct: 1151 LKSLDLGLSRISDSTLYCICLSRSITSLNLDSSWKLTDISHISNLTALEELNLGGCYYIT 1210
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAY-----------------------LRNFKNLR 399
+G AL+ L L L+L R+T Y L N K L
Sbjct: 1211 SGWKALSELPRLRVLNLEFTRVTTRDGGYYISRCKYLVTLNLELCDMTDASCLANIKTLE 1270
Query: 400 SLEICGGGLTDAGLTGLVS------LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAN 453
L I G G + L + LN+ S IT LR ++P + L L C V N
Sbjct: 1271 ELHIGGCDELTQGFSALFTLPQLRILNLICSLITDEDLREIQPPHTIEELNLSYC-VELN 1329
Query: 454 DIKRL 458
DI L
Sbjct: 1330 DITPL 1334
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD-SGIAYLKGLQKLTL 208
++ L LE LN+ C IT S K LS L L+ L + ++VT G Y+ + L
Sbjct: 1191 HISNLTALEELNLGGCYYIT-SGWKALSELPRLRVLNLEFTRVTTRDGGYYISRCKYLVT 1249
Query: 209 LNLEGCPVT-AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
LNLE C +T A+CL ++ L L ++ C G + L++LNL + ITDE
Sbjct: 1250 LNLELCDMTDASCLANIKTLEEL---HIGGCDELTQGFSALFTLPQLRILNLICSLITDE 1306
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL---SDTQVGSSGLRHLSGLT 324
L ++ +E LNL C + + L + ++K L L D + + G R L L
Sbjct: 1307 DLREIQPPHTIEELNLSYC-VELNDITPLGRIKSIKKLHLRQRHDVRRPTEGFRSLLELP 1365
Query: 325 NLESINL-SFTGISDGS--LRK 343
L ++L + G SD S LRK
Sbjct: 1366 CLSWVDLDNVYGWSDVSCELRK 1387
>gi|291000432|ref|XP_002682783.1| predicted protein [Naegleria gruberi]
gi|284096411|gb|EFC50039.1| predicted protein [Naegleria gruberi]
Length = 303
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 6/206 (2%)
Query: 211 LEGCPVTAACLDSL------SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI 264
+E + LDS+ S + L L ++ + D+G + S++ L L++ +N+I
Sbjct: 95 IENVKFSRRLLDSIEQAKFISEMKQLKSLTIDENGIGDEGAKFISEMKQLTSLSVYYNQI 154
Query: 265 TDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLT 324
DE + + L SL++ IGDEG ++ + L L++ Q+G G + +SG+
Sbjct: 155 GDEGAKSISEMNQLTSLDISGNQIGDEGAKSIIEVKQLTSLDIYFNQIGEEGAKFISGMN 214
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI 384
L S+++S I D + ++G++ L SLN+ +I D G ++ + L L++ G RI
Sbjct: 215 QLTSLDISGNRIGDEGAKSISGMNQLTSLNVYNNRIGDEGAKSIIDMKQLKSLNIGGNRI 274
Query: 385 TDSGAAYLRNFKNLRSLEICGGGLTD 410
D A + K L SL+I + D
Sbjct: 275 GDEEAKSISEMKQLTSLDISNNRIGD 300
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 26/231 (11%)
Query: 161 NIKWCNCITDS--DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
N+K+ + DS K +S + LKSL I + + D G ++ +++LT L
Sbjct: 97 NVKFSRRLLDSIEQAKFISEMKQLKSLTIDENGIGDEGAKFISEMKQLTSL--------- 147
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
S++Y Q+ D+G + S++ L L++ N+I DE + + L
Sbjct: 148 ----------SVYY-----NQIGDEGAKSISEMNQLTSLDISGNQIGDEGAKSIIEVKQL 192
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
SL++ IG+EG ++G+ L L++S ++G G + +SG+ L S+N+ I D
Sbjct: 193 TSLDIYFNQIGEEGAKFISGMNQLTSLDISGNRIGDEGAKSISGMNQLTSLNVYNNRIGD 252
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGA 389
+ + + LKSLN+ +I D +++ + LT LD+ RI D A
Sbjct: 253 EGAKSIIDMKQLKSLNIGGNRIGDEEAKSISEMKQLTSLDISNNRIGDEEA 303
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 24/197 (12%)
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
+ L+SL +D GIGDEG ++ + L L + Q+G G + +S + L S+++S
Sbjct: 117 MKQLKSLTIDENGIGDEGAKFISEMKQLTSLSVYYNQIGDEGAKSISEMNQLTSLDISGN 176
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
I D + + + L SL++ QI + G ++ + LT LD+ G RI D GA +
Sbjct: 177 QIGDEGAKSIIEVKQLTSLDIYFNQIGEEGAKFISGMNQLTSLDISGNRIGDEGAKSI-- 234
Query: 395 FKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV---- 450
+G+ L SLNV N+RI G + + +K L+SL + ++
Sbjct: 235 ----------------SGMNQLTSLNVYNNRIGDEGAKSIIDMKQLKSLNIGGNRIGDEE 278
Query: 451 --TANDIKRLQSRDLPN 465
+ +++K+L S D+ N
Sbjct: 279 AKSISEMKQLTSLDISN 295
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Query: 41 YPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLE 100
Y + D+ I S+ + L S+D+SG+ + D G + + L SLD F QI + G +
Sbjct: 151 YNQIGDEGAKSI-SEMNQLTSLDISGNQIGDEGAKSIIEVKQLTSLDIYFN-QIGEEGAK 208
Query: 101 HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL 160
+ G++ LTSL N I +G K+ +G+ L L++ G ++ + +L+SL
Sbjct: 209 FISGMNQLTSLDI-SGNRIGDEGAKSISGMNQLTSLNVYNNRIGDEGAKSIIDMKQLKSL 267
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD 194
NI N I D + K +S + L SL IS +++ D
Sbjct: 268 NI-GGNRIGDEEAKSISEMKQLTSLDISNNRIGD 300
>gi|290978509|ref|XP_002671978.1| predicted protein [Naegleria gruberi]
gi|284085551|gb|EFC39234.1| predicted protein [Naegleria gruberi]
Length = 284
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 26/239 (10%)
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K +S L NL +L I S++ + G+ + L+ LT LN+ +
Sbjct: 57 KSISDLKNLTTLDIGYSRIGNEGLESIGQLENLTRLNIRSNNIGL--------------- 101
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
E + +L L++G N I +E + + LT L SL +D I +EG
Sbjct: 102 -----------VEPIINLKTLTALDIGENSIGNEGVKSISKLTELTSLFIDYDDINEEGA 150
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
L L NL L+L+ + +G G + + T L+ + LS IS+ + L+ L+ L L
Sbjct: 151 KYLCELPNLTILDLTGSNIGDEGAKFIGQSTKLKHLFLSLADISNVGVNYLSSLNELVDL 210
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
L I D GL L+SL L +L++ G +ITD G ++R +NL+ + I LT G
Sbjct: 211 ILSLNDIGDEGLKHLSSLKMLNYLNVSGNQITDEGVVFIREMENLKRISITNNLLTAVG 269
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 131/266 (49%), Gaps = 14/266 (5%)
Query: 198 AYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL-NLNRCQLSDDGCEKFSKIGSLK- 255
+++K ++L L +++ L L L + N+ + + DG + I LK
Sbjct: 5 SFIKLFRELELFEGIDNEISSDFLKEFKYLRELTIIRNMAKHESILDGVGRAKSISDLKN 64
Query: 256 --VLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG-DEGLVNLTGLCNLKCLELSDTQV 312
L++G++ I +E L + L NL LN+ S IG E ++NL L L++ + +
Sbjct: 65 LTTLDIGYSRIGNEGLESIGQLENLTRLNIRSNNIGLVEPIINLKTLT---ALDIGENSI 121
Query: 313 GSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT 372
G+ G++ +S LT L S+ + + I++ + L L +L L+L I D G + T
Sbjct: 122 GNEGVKSISKLTELTSLFIDYDDINEEGAKYLCELPNLTILDLTGSNIGDEGAKFIGQST 181
Query: 373 GLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS------LNVSNSRI 426
L HL L A I++ G YL + L L + + D GL L S LNVS ++I
Sbjct: 182 KLKHLFLSLADISNVGVNYLSSLNELVDLILSLNDIGDEGLKHLSSLKMLNYLNVSGNQI 241
Query: 427 TSAGLRHLKPLKNLRSLTLESCKVTA 452
T G+ ++ ++NL+ +++ + +TA
Sbjct: 242 TDEGVVFIREMENLKRISITNNLLTA 267
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 118/254 (46%), Gaps = 32/254 (12%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
+ D NL +LD + +I + GLE + L NLT L+ R NN I LV+
Sbjct: 59 ISDLKNLTTLDIGYS-RIGNEGLESIGQLENLTRLNIRSNN-------------IGLVE- 103
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG 196
++NLK L L+ N I + +K +S LT L SL I + + G
Sbjct: 104 ----------PIINLKTLTALDI----GENSIGNEGVKSISKLTELTSLFIDYDDINEEG 149
Query: 197 IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 256
YL L LT+L+L G + + L +L L+ +S+ G S + L
Sbjct: 150 AKYLCELPNLTILDLTGSNIGDEGAKFIGQSTKLKHLFLSLADISNVGVNYLSSLNELVD 209
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSD---TQVG 313
L L N+I DE L HL L L LN+ I DEG+V + + NLK + +++ T VG
Sbjct: 210 LILSLNDIGDEGLKHLSSLKMLNYLNVSGNQITDEGVVFIREMENLKRISITNNLLTAVG 269
Query: 314 SSGLRHLSGLTNLE 327
+ ++ +S T+L+
Sbjct: 270 ENLIQEMSITTDLD 283
>gi|320168558|gb|EFW45457.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 828
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 7/273 (2%)
Query: 116 NNAITAQGMKAFAGLINLVKLDL--ERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSD 172
NN IT+ AF GL L +L L + + I +L L+ L + N IT +
Sbjct: 118 NNQITSISANAFVGLTALTQLLLYNNQISSIPASAWADLNTLINLS----LYQNRITSIN 173
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
L+ LT LK+L + +++T GL LT L ++ P+T+ + ++L +L
Sbjct: 174 DASLTSLTALKTLILDNNQITSVPANAFAGLTSLTYLTVQSNPITSISAGAFASLSALTC 233
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L L+ QL + F+ + +L +LNL N++T GL L L L I
Sbjct: 234 LYLSSNQLVSIPADAFTDLTALTLLNLRDNQLTSISANAFTGLVALTQLQLPGNQITSIA 293
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
TGL L L+L+ Q S L+GL L ++ L I+ AG+++L++
Sbjct: 294 ADAFTGLNALSFLDLTSNQFSSIPSSALTGLPALSTLILYTNSITSIPANAFAGMTALQA 353
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
+ L QIT +A T LT +T+L L G +T
Sbjct: 354 VVLSTNQITSIAASAFTGLTAVTYLVLDGNPVT 386
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 132/307 (42%), Gaps = 7/307 (2%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
GL L +L++ + N +T + LT LK L++ +++T GL LT L
Sbjct: 81 FTGLTALTTLHL-YANQLTSIPAYNFTVLTALKDLRLDNNQITSISANAFVGLTALTQLL 139
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
L +++ + + L +L L+L + +++ + + +LK L L N+IT
Sbjct: 140 LYNNQISSIPASAWADLNTLINLSLYQNRITSINDASLTSLTALKTLILDNNQITSVPAN 199
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
GLT+L L + S I L L CL LS Q+ S + LT L +N
Sbjct: 200 AFAGLTSLTYLTVQSNPITSISAGAFASLSALTCLYLSSNQLVSIPADAFTDLTALTLLN 259
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
L ++ S GL +L L L QIT A T L L+ LDL + + ++
Sbjct: 260 LRDNQLTSISANAFTGLVALTQLQLPGNQITSIAADAFTGLNALSFLDLTSNQFSSIPSS 319
Query: 391 YLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
L L +L + +T AG+T L ++ +S ++ITS L + L
Sbjct: 320 ALTGLPALSTLILYTNSITSIPANAFAGMTALQAVVLSTNQITSIAASAFTGLTAVTYLV 379
Query: 445 LESCKVT 451
L+ VT
Sbjct: 380 LDGNPVT 386
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 91/217 (41%), Gaps = 16/217 (7%)
Query: 247 KFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS---CGIGDEGLVNLTGLCNLK 303
F+ + +L L+L N++T + LT L+ L LD+ I V LT L L
Sbjct: 80 AFTGLTALTTLHLYANQLTSIPAYNFTVLTALKDLRLDNNQITSISANAFVGLTALTQLL 139
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
+ + +S L+ L NL T I+D SL L ++LK+L LD QIT
Sbjct: 140 LYNNQISSIPASAWADLNTLINLSLYQNRITSINDASLTSL---TALKTLILDNNQITSV 196
Query: 364 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL--------EICGGGLTDAGLTG 415
A LT LT+L + IT A + L L I TD LT
Sbjct: 197 PANAFAGLTSLTYLTVQSNPITSISAGAFASLSALTCLYLSSNQLVSIPADAFTD--LTA 254
Query: 416 LVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
L LN+ ++++TS L L L L ++T+
Sbjct: 255 LTLLNLRDNQLTSISANAFTGLVALTQLQLPGNQITS 291
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 102/261 (39%), Gaps = 10/261 (3%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
S + S L NL SL N I+D L L L L NN IT+ A
Sbjct: 146 SSIPASAWADLNTLINL-SLYQNRITSINDASLTSLTALKTL----ILDNNQITSVPANA 200
Query: 127 FAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
FAGL +L L ++ T I G L L L + N + + LT L
Sbjct: 201 FAGLTSLTYLTVQSNPITSISAGA--FASLSALTCLYLS-SNQLVSIPADAFTDLTALTL 257
Query: 185 LQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
L + +++T GL LT L L G +T+ D+ + L +L +L+L Q S
Sbjct: 258 LNLRDNQLTSISANAFTGLVALTQLQLPGNQITSIAADAFTGLNALSFLDLTSNQFSSIP 317
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
+ + +L L L N IT G+T L+++ L + I TGL +
Sbjct: 318 SSALTGLPALSTLILYTNSITSIPANAFAGMTALQAVVLSTNQITSIAASAFTGLTAVTY 377
Query: 305 LELSDTQVGSSGLRHLSGLTN 325
L L V + GL N
Sbjct: 378 LVLDGNPVTTLPPGLFQGLPN 398
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 119/276 (43%), Gaps = 30/276 (10%)
Query: 207 TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
T L+L+G + + + + L +L L+L QL+ F+ + +LK L L N+IT
Sbjct: 64 TRLSLQGNLIPSIAAGAFTGLTALTTLHLYANQLTSIPAYNFTVLTALKDLRLDNNQITS 123
Query: 267 ECLVHLKGLTNLESL--------NLDSCGIGD-EGLVN---------------LTGLCNL 302
GLT L L ++ + D L+N LT L L
Sbjct: 124 ISANAFVGLTALTQLLLYNNQISSIPASAWADLNTLINLSLYQNRITSINDASLTSLTAL 183
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
K L L + Q+ S +GLT+L + + I+ S A LS+L L L + Q+
Sbjct: 184 KTLILDNNQITSVPANAFAGLTSLTYLTVQSNPITSISAGAFASLSALTCLYLSSNQLVS 243
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLT----DA--GLTGL 416
A T LT LT L+L ++T A L L++ G +T DA GL L
Sbjct: 244 IPADAFTDLTALTLLNLRDNQLTSISANAFTGLVALTQLQLPGNQITSIAADAFTGLNAL 303
Query: 417 VSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
L++++++ +S L L L +L L + +T+
Sbjct: 304 SFLDLTSNQFSSIPSSALTGLPALSTLILYTNSITS 339
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 2/151 (1%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
Q++ GL LT L N IT+ AF GL L LDL L
Sbjct: 264 QLTSISANAFTGLVALTQLQLPGNQ-ITSIAADAFTGLNALSFLDLTSNQFSSIPSSALT 322
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
GL L +L I + N IT +G+T L+++ +S +++T + GL +T L L+
Sbjct: 323 GLPALSTL-ILYTNSITSIPANAFAGMTALQAVVLSTNQITSIAASAFTGLTAVTYLVLD 381
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
G PVT L + YL++++ +S +
Sbjct: 382 GNPVTTLPPGLFQGLPNGLYLSVSQQYMSPN 412
>gi|397781344|ref|YP_006545817.1| Internalin-A [Methanoculleus bourgensis MS2]
gi|396939846|emb|CCJ37101.1| Internalin-A [Methanoculleus bourgensis MS2]
Length = 2759
Score = 85.9 bits (211), Expect = 4e-14, Method: Composition-based stats.
Identities = 102/346 (29%), Positives = 156/346 (45%), Gaps = 70/346 (20%)
Query: 137 DLERCTRIHG---GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
D+ TR+ G+ +L GL +L + + SD+ PL+GLTNL++L + ++V+
Sbjct: 1506 DMATLTRLSAAGRGIRDLSGLEYAVNLQTLYISNNQISDLSPLAGLTNLQTLWLQDNQVS 1565
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGS 253
D L L+ L +L L LN+ Q+ D + + +
Sbjct: 1566 D--------------------------LSPLAGLTNLQRLWLNQNQIRD--VSPLAGLTN 1597
Query: 254 LKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVG 313
L+ L L N+I+D L L GLTNL + L I D L L GL NL ++L Q+
Sbjct: 1598 LRELLLAVNQISD--LSPLAGLTNLGYVQLYRNQISD--LSPLAGLTNLGYVQLYRNQI- 1652
Query: 314 SSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 373
S L L+GLTNL +++S+ ISD L LA L++L L++ QI+D ++ L LT
Sbjct: 1653 -SDLSPLAGLTNLYFLDISYNQISD--LSPLASLTNLYFLDISYNQISD--ISPLAGLTR 1707
Query: 374 LTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRI------- 426
L+ L L +I+D AGL L LN++ ++I
Sbjct: 1708 LSRLSLDNNQISDISPL--------------------AGLINLYVLNLNYNQIRDISPLV 1747
Query: 427 TSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFRPE 472
++GL L L NDI+ LQSR + V + P+
Sbjct: 1748 ANSGLAGDDVYLQYNYLDLTPGSAAMNDIQTLQSRGV--YVVYEPQ 1791
Score = 56.6 bits (135), Expect = 3e-05, Method: Composition-based stats.
Identities = 64/184 (34%), Positives = 93/184 (50%), Gaps = 22/184 (11%)
Query: 292 GLVNLTGL---CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
G+ +L+GL NL+ L L + S L L+GLT+L++++L ISD L LAGL+
Sbjct: 727 GIRDLSGLEYAVNLQHLYLQQNR-QISDLGPLAGLTDLQTLDLWNNQISD--LSPLAGLT 783
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL 408
+L L L + QI+D G L LT L L L+ +I D G L NL L + +
Sbjct: 784 NLSVLLLGSNQISDIG--PLAGLTDLQRLHLYDNQIRDIGP--LAGLTNLWELRLYNNQI 839
Query: 409 TDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVS 468
D G V+NS + S +L+ N LT S + NDI+ LQSR + V+
Sbjct: 840 RDIGPL------VANSGLGSGDEVYLQ--YNYLDLTPGSADM--NDIQTLQSRGV--YVA 887
Query: 469 FRPE 472
+ P+
Sbjct: 888 YEPQ 891
Score = 50.4 bits (119), Expect = 0.002, Method: Composition-based stats.
Identities = 49/150 (32%), Positives = 71/150 (47%), Gaps = 36/150 (24%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
QISD L L GL+NL + RN + AGL NL LD+
Sbjct: 1629 QISD--LSPLAGLTNLGYVQLYRNQI---SDLSPLAGLTNLYFLDISY------------ 1671
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
N I SD+ PL+ LTNL L IS ++++D I+ L GL +L+ L+L+
Sbjct: 1672 -------------NQI--SDLSPLASLTNLYFLDISYNQISD--ISPLAGLTRLSRLSLD 1714
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
++ + L+ L +L+ LNLN Q+ D
Sbjct: 1715 NNQISD--ISPLAGLINLYVLNLNYNQIRD 1742
Score = 47.0 bits (110), Expect = 0.024, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 13/127 (10%)
Query: 122 QGMKAFAGL---INLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
+G++ +GL +NL L L++ +I L L GL L++L++ W N I SD+ PL+G
Sbjct: 726 RGIRDLSGLEYAVNLQHLYLQQNRQI-SDLGPLAGLTDLQTLDL-WNNQI--SDLSPLAG 781
Query: 179 LTNLKSLQISCSKVTDSG-IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
LTNL L + ++++D G +A L LQ+L L + + + L+ L +L+ L L
Sbjct: 782 LTNLSVLLLGSNQISDIGPLAGLTDLQRLHLYDNQ-----IRDIGPLAGLTNLWELRLYN 836
Query: 238 CQLSDDG 244
Q+ D G
Sbjct: 837 NQIRDIG 843
>gi|406831323|ref|ZP_11090917.1| hypothetical protein SpalD1_06790 [Schlesneria paludicola DSM
18645]
Length = 539
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 159/346 (45%), Gaps = 19/346 (5%)
Query: 24 SLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNL 83
+++A ++ A Q L + + + + + +++S+ G + D L S L
Sbjct: 129 TMKAVKERAKQRLPKWIHEYFDSPKLRIFSDDDGNVVSLSDYGV-LNDKALAKFSVLSTL 187
Query: 84 QSLDFNFCIQISDGGLEHLRGLSNL----TSLSFRRNNAITAQGMKAFAGLINLVKLDLE 139
+ + F Q + GL HL L+NL S S + N + +++ + + +L +L+L
Sbjct: 188 RGIQFEGAPQFTVEGLSHLSKLTNLERLSASFSSQSANELGDATLRSISEIESLRELNLS 247
Query: 140 RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCS--------K 191
C GL +L+ L L L+I +TD+ + ++ L +LK L ++
Sbjct: 248 ECGVTDEGLKSLEKLPNLTHLSIYQEGRLTDAALSTIAKLKHLKVLTLTTHVGTPLGRMH 307
Query: 192 VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI 251
++S L L +L L+L G V+ L+ L L +NR Q DD + +K
Sbjct: 308 FSESATNQLIALTELEHLDLSGHDVSTDLLN----FPRLKSLRINRNQFDDDLAKAIAKC 363
Query: 252 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ 311
L L++ +E+TD L HL+ L +L L++ + I D + +L NL + L +
Sbjct: 364 RELTHLDVSCSEMTDTALEHLRPLPSLTQLHIRAEEISDNAIAHLKLFPNLASVTLHTAE 423
Query: 312 VGSSGLRHLSGLTNLESINLSFT--GISDGSLRKLAGLSSLKSLNL 355
+ L +LS +L ++L++ S L +LA L +L++L L
Sbjct: 424 LTDKSLEYLSQTASLTKLDLNWATNHFSRHGLEQLANLPNLETLEL 469
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 143/334 (42%), Gaps = 54/334 (16%)
Query: 192 VTDSGIAYLKGLQKLTLL------NLEGCP-VTAACLDSLSALGSLFYLNLNRC-----Q 239
++D G+ K L K ++L EG P T L LS L +L L+ + +
Sbjct: 167 LSDYGVLNDKALAKFSVLSTLRGIQFEGAPQFTVEGLSHLSKLTNLERLSASFSSQSANE 226
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTG 298
L D S+I SL+ LNL +TDE L L+ L NL L++ G + D L +
Sbjct: 227 LGDATLRSISEIESLRELNLSECGVTDEGLKSLEKLPNLTHLSIYQEGRLTDAALSTIAK 286
Query: 299 LCNLKCLELSDTQVGSS-GLRHLS--------GLTNLESINLSFTGIS------------ 337
L +LK L L+ T VG+ G H S LT LE ++LS +S
Sbjct: 287 LKHLKVLTLT-THVGTPLGRMHFSESATNQLIALTELEHLDLSGHDVSTDLLNFPRLKSL 345
Query: 338 --------DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGA 389
D + +A L L++ ++TDT L L L LT L + I+D+
Sbjct: 346 RINRNQFDDDLAKAIAKCRELTHLDVSCSEMTDTALEHLRPLPSLTQLHIRAEEISDNAI 405
Query: 390 AYLRNFKNLRSLEICGGGLTDAGLTGL--------VSLNVSNSRITSAGLRHLKPLKNLR 441
A+L+ F NL S+ + LTD L L + LN + + + GL L L NL
Sbjct: 406 AHLKLFPNLASVTLHTAELTDKSLEYLSQTASLTKLDLNWATNHFSRHGLEQLANLPNLE 465
Query: 442 SLTLESCKVTANDIKRLQSRDLPNLVSF---RPE 472
+L L +K ++ P +++ RP+
Sbjct: 466 TLELRIIPFQGGGLKLIRDAKEPEILTTILPRPQ 499
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
L +D+S S++TD+ L HL+ +L L +ISD + HL+ NL S++
Sbjct: 365 ELTHLDVSCSEMTDTALEHLRPLPSLTQLHIR-AEEISDNAIAHLKLFPNLASVTL-HTA 422
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRI--HGGLVNLKGLMKLESLNIK 163
+T + ++ + +L KLDL T GL L L LE+L ++
Sbjct: 423 ELTDKSLEYLSQTASLTKLDLNWATNHFSRHGLEQLANLPNLETLELR 470
>gi|356505803|ref|XP_003521679.1| PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max]
Length = 641
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 214/445 (48%), Gaps = 58/445 (13%)
Query: 69 VTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN--AITAQGMK 125
VTD GL + C L+ L +C++ISD G++ L L F + +T++ ++
Sbjct: 158 VTDIGLAKIAVGCGKLERLSLKWCLEISDLGIDLL--CKKCLDLKFLDVSYLKVTSESLR 215
Query: 126 AFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDM-KPLSGLTNL 182
+ A L+ L + C+ + GL L KG L+++++ C+C++ S + +SG L
Sbjct: 216 SIASLLKLEVFVMVGCSLVDDVGLRFLEKGCPLLKAIDVSRCDCVSSSGLISVISGHGGL 275
Query: 183 KSLQ--ISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA-LGSLFYLNLNRCQ 239
+ L S+++ + L+ L++L ++ ++G V+ L ++ SL L L++C
Sbjct: 276 EQLDAGYCLSELSAPLVKCLENLKQLRIIRIDGVRVSDFILQTIGTNCKSLVELGLSKCV 335
Query: 240 -LSDDGCEKF-SKIGSLKVLNL---------GFNEITDECLVHLKGLTNLESLNLDSCGI 288
+++ G + S G LK+L+L + I D C +L L L+SC +
Sbjct: 336 GVTNKGIVQLVSGCGYLKILDLTCCRFISDAAISTIADSC-------PDLVCLKLESCDM 388
Query: 289 GDEGLVNLTGL-CN-LKCLELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKL 344
E + GL C+ LK L+L+D V LR+LS + L + L T ISD L +
Sbjct: 389 VTENCLYQLGLNCSLLKELDLTDCSGVDDIALRYLSRCSELVRLKLGLCTNISDIGLAHI 448
Query: 345 A-GLSSLKSLNL-DARQITDTGLAALTS-LTGLTHLDL-FGARITDSGAAYLRNFKNLRS 400
A + L+L +I D GLAALTS GLT+L+L + RITD G Y+ + L
Sbjct: 449 ACNCPKMTELDLYRCVRIGDDGLAALTSGCKGLTNLNLSYCNRITDRGLEYISHLGELSD 508
Query: 401 LEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPL------------KNLRSLTLESC 448
LE+ GL++ G+ ++ +S R+ L+H + + +NLR + + C
Sbjct: 509 LEL--RGLSNITSIGIKAVAISCKRLADLDLKHCEKIDDSGFWALAFYSQNLRQINMSYC 566
Query: 449 KVT-------ANDIKRLQSRDLPNL 466
V+ ++KRLQ L L
Sbjct: 567 IVSDMVLCMLMGNLKRLQDAKLVCL 591
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 13/186 (6%)
Query: 22 EVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGS-DVTDSGLIHLKD 79
+++L C+ L L LG ++D + IA + +DL + D GL L
Sbjct: 417 DIALRYLSRCSELVRLKLGLCTNISDIGLAHIACNCPKMTELDLYRCVRIGDDGLAALTS 476
Query: 80 -CSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLD 137
C L +L+ ++C +I+D GLE++ L L+ L R + IT+ G+KA A L LD
Sbjct: 477 GCKGLTNLNLSYCNRITDRGLEYISHLGELSDLELRGLSNITSIGIKAVAISCKRLADLD 536
Query: 138 LERCTRI-HGGLVNLKGLMK-LESLNIKWCNCITDSDMKPLSGLTNLKSLQ----ISCSK 191
L+ C +I G L + L +N+ +C SDM + NLK LQ + SK
Sbjct: 537 LKHCEKIDDSGFWALAFYSQNLRQINMSYC---IVSDMVLCMLMGNLKRLQDAKLVCLSK 593
Query: 192 VTDSGI 197
V+ G+
Sbjct: 594 VSVKGL 599
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 109/250 (43%), Gaps = 39/250 (15%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSD-VTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEH 101
++D + IA L+ + L D VT++ L L +CS L+ LD C + D L +
Sbjct: 363 ISDAAISTIADSCPDLVCLKLESCDMVTENCLYQLGLNCSLLKELDLTDCSGVDDIALRY 422
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRI-HGGLVNL-KGLMKLE 158
L S L L I+ G+ A + +LDL RC RI GL L G L
Sbjct: 423 LSRCSELVRLKLGLCTNISDIGLAHIACNCPKMTELDLYRCVRIGDDGLAALTSGCKGLT 482
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VT 217
+LN+ +CN ++TD G+ Y+ L +L+ L L G +T
Sbjct: 483 NLNLSYCN------------------------RITDRGLEYISHLGELSDLELRGLSNIT 518
Query: 218 AACLDSLS-ALGSLFYLNLNRCQLSDDGCEKFSKIG----SLKVLNLGFNEITDECLVHL 272
+ + +++ + L L+L C+ DD F + +L+ +N+ + ++D L L
Sbjct: 519 SIGIKAVAISCKRLADLDLKHCEKIDDS--GFWALAFYSQNLRQINMSYCIVSDMVLCML 576
Query: 273 KGLTNLESLN 282
G NL+ L
Sbjct: 577 MG--NLKRLQ 584
>gi|195029827|ref|XP_001987773.1| GH22100 [Drosophila grimshawi]
gi|193903773|gb|EDW02640.1| GH22100 [Drosophila grimshawi]
Length = 550
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 187/371 (50%), Gaps = 62/371 (16%)
Query: 7 SQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG 66
S +FN LV R + +V + + R +L+DL LG +L S++LSG
Sbjct: 214 SPSLFNCLV-RRGIKKVQILSLRR-SLKDLVLGV----------------PALTSLNLSG 255
Query: 67 S-DVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQ 122
+V D L H D NL++LD + C QI+D L + + L NL +L IT
Sbjct: 256 CFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGRIAQHLKNLETLELGGCCNITNT 315
Query: 123 GMKAFA-GLINLVKLDLERCTRIH-GGLVNLKGL--------MKLESLNIKWCNCITDSD 172
G+ A GL L L+L C I G+ +L G ++LE L ++ C ++D
Sbjct: 316 GLLLIAWGLKKLRHLNLRSCWHISDQGIGHLAGFSRETAEGNLQLEFLGLQDCQRLSDEA 375
Query: 173 MKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
+ ++ GLT+LKS+ +S C VTDSG+ +L + KL LNL C D++S +G
Sbjct: 376 LGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC-------DNISDIGMA 428
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDSCGI 288
+ L++ G + L++ F ++I+D+ L H+ +GL L SL+L+ C I
Sbjct: 429 Y--------LTEGG-------SGINCLDVSFCDKISDQALTHIAQGLFRLRSLSLNQCHI 473
Query: 289 GDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKL 344
D+G++ + L L+ L + +++ GL+ L+ L+NL++I+L T +S + +
Sbjct: 474 TDQGMLKIAKSLHELENLNIGQCSRITDKGLQTLAEDLSNLKTIDLYGCTQLSSKGIDII 533
Query: 345 AGLSSLKSLNL 355
L L+ LNL
Sbjct: 534 MKLPKLQKLNL 544
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 167/329 (50%), Gaps = 36/329 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAF-----AGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
RG+ + LS RR+ G+ A +G N+ ++L H V+L L
Sbjct: 224 RGIKKVQILSLRRSLKDLVLGVPALTSLNLSGCFNVADMNLG-----HAFSVDLPNL--- 275
Query: 158 ESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGC 214
++L++ C ITD+ + ++ L NL++L++ C +T++G+ + GL+KL LNL C
Sbjct: 276 KTLDLSLCKQITDTSLGRIAQHLKNLETLELGGCCNITNTGLLLIAWGLKKLRHLNLRSC 335
Query: 215 PVTA-------ACLDSLSALGSL--FYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A +A G+L +L L CQ LSD+ ++ + SLK +NL F
Sbjct: 336 WHISDQGIGHLAGFSRETAEGNLQLEFLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCV 395
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRH 319
+TD L HL + LE LNL SC I D G+ LT G + CL++S ++ L H
Sbjct: 396 SVTDSGLKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINCLDVSFCDKISDQALTH 455
Query: 320 LS-GLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNL-DARQITDTGLAALTS-LTGLT 375
++ GL L S++L+ I+D + K+A L L++LN+ +ITD GL L L+ L
Sbjct: 456 IAQGLFRLRSLSLNQCHITDQGMLKIAKSLHELENLNIGQCSRITDKGLQTLAEDLSNLK 515
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEI 403
+DL+G +++ G + L+ L +
Sbjct: 516 TIDLYGCTQLSSKGIDIIMKLPKLQKLNL 544
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 83/191 (43%), Gaps = 31/191 (16%)
Query: 274 GLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSGLT 324
G+ L SLNL C +G V+L L L C +++DT +G +HL L
Sbjct: 244 GVPALTSLNLSGCFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGRIA-QHLKNLE 302
Query: 325 NLE---SINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLF 380
LE N++ TG+ L GL L+ LNL + I+D G+ L +
Sbjct: 303 TLELGGCCNITNTGL----LLIAWGLKKLRHLNLRSCWHISDQGIGHLAGFS-------- 350
Query: 381 GARITDSGAAYLR--NFKNLRSLEICGGGLTDAGLTGLVSLNVSN-SRITSAGLRHLKPL 437
R T G L ++ + L G GLT L S+N+S +T +GL+HL +
Sbjct: 351 --RETAEGNLQLEFLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARM 408
Query: 438 KNLRSLTLESC 448
L L L SC
Sbjct: 409 PKLEQLNLRSC 419
>gi|434385223|ref|YP_007095834.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
PCC 6605]
gi|428016213|gb|AFY92307.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
PCC 6605]
Length = 362
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 150/289 (51%), Gaps = 49/289 (16%)
Query: 171 SDMKPLSGLTNLKSLQISCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
SD++P++ LTNL+ L + +TD + +A LK L L + + L L LGS
Sbjct: 98 SDLRPIASLTNLRKLSLYSHNITDLTPLANLKQLDALV--------INSNKLTDLKPLGS 149
Query: 230 LFYLNLNRCQLSD-DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
L LN + + +K+ +LK L L ++ I D + +K LT L ++ I
Sbjct: 150 LNNLNDLGLLGRNIVNIKPIAKLTNLKKLTLWYSSIQD--IKAVKNLTQLTEVSFIDTKI 207
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
D L L L +L LE+++++V + +R LSGLTNL+ I L+ IS+ ++ LA L+
Sbjct: 208 AD--LSPLANLKSLTTLEVTNSKV--TDIRALSGLTNLKRIVLNNNQISN--IQPLARLT 261
Query: 349 SLKSLNLDARQITD-TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGG 407
+LKSLNL+ +I++ T LA LTSLTG ++L +I D
Sbjct: 262 NLKSLNLNFNRISNLTPLAGLTSLTG---INLSDNQIVDIQPI----------------- 301
Query: 408 LTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIK 456
A LT LV LN++N++IT ++KPL L+ LE+ V+ N +K
Sbjct: 302 ---AALTQLVGLNLNNNKIT-----NIKPLAKLQK--LETLVVSKNKVK 340
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 134/288 (46%), Gaps = 29/288 (10%)
Query: 92 IQISD---GGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGL 148
IQI D LE LS T L ++ A L NL KL L +
Sbjct: 69 IQIPDCRAAALE----LSQRTELLTSSPTPADISDLRPIASLTNLRKLSLY-----SHNI 119
Query: 149 VNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD-SGIAYLKGLQKLT 207
+L L L+ L+ N +D+KPL L NL L + + + IA L L+KLT
Sbjct: 120 TDLTPLANLKQLDALVINSNKLTDLKPLGSLNNLNDLGLLGRNIVNIKPIAKLTNLKKLT 179
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
L + A + +L+ L + +++ LS + + SL L + +++TD
Sbjct: 180 LWYSSIQDIKA--VKNLTQLTEVSFIDTKIADLS-----PLANLKSLTTLEVTNSKVTD- 231
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
+ L GLTNL+ + L++ I + + L L NLK L L+ ++ S L L+GLT+L
Sbjct: 232 -IRALSGLTNLKRIVLNNNQISN--IQPLARLTNLKSLNLNFNRI--SNLTPLAGLTSLT 286
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT-GLAALTSLTGL 374
INLS I D ++ +A L+ L LNL+ +IT+ LA L L L
Sbjct: 287 GINLSDNQIVD--IQPIAALTQLVGLNLNNNKITNIKPLAKLQKLETL 332
>gi|344278047|ref|XP_003410808.1| PREDICTED: F-box/LRR-repeat protein 14 [Loxodonta africana]
Length = 514
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 170/319 (53%), Gaps = 40/319 (12%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYHLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGL----RHLSGLTNLESINLSFTGISDGSLRKL 344
+ GL L +C+ ++D GL HLS LT ++ T I+ L ++
Sbjct: 325 MVRQMHGLRTLNIGQCVRITD-----KGLELIAEHLSQLTGIDLYGC--TRITKRGLERI 377
Query: 345 AGLSSLKSLNLDARQITDT 363
L LK LNL Q+TD+
Sbjct: 378 TQLPCLKVLNLGLWQMTDS 396
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 182/377 (48%), Gaps = 56/377 (14%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYHLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-K 273
LS +G + R + +GC +G ++ ++TD L H+ +
Sbjct: 180 -------RHLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTDLSLKHISR 225
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESIN 330
GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L ++
Sbjct: 226 GLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLD 285
Query: 331 LSF-TGISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITD 386
+SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ RITD
Sbjct: 286 VSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITD 345
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
G LE+ L+ LTG+ +RIT GL + L L+ L L
Sbjct: 346 KG------------LELIAEHLSQ--LTGIDLYGC--TRITKRGLERITQLPCLKVLNLG 389
Query: 447 SCKVTANDIKRLQSRDL 463
++T D ++ SR+
Sbjct: 390 LWQMT--DSEKTSSREF 404
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGC-----------------------TRITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
>gi|410046126|ref|XP_003952131.1| PREDICTED: LOW QUALITY PROTEIN: F-box/LRR-repeat protein 14 [Pan
troglodytes]
Length = 568
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 170/319 (53%), Gaps = 40/319 (12%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 236 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 295
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 296 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 355
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 356 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 415
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 416 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 474
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGL----RHLSGLTNLESINLSFTGISDGSLRKL 344
+ GL L +C+ ++D GL HLS LT ++ T I+ L ++
Sbjct: 475 MVRQMHGLRTLNIGQCVRITD-----KGLELIAEHLSQLTGIDLYGC--TRITKRGLERI 527
Query: 345 AGLSSLKSLNLDARQITDT 363
L LK LNL Q+TD+
Sbjct: 528 TQLPCLKVLNLGLWQMTDS 546
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 183/384 (47%), Gaps = 56/384 (14%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 218 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 271
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 272 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 329
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-K 273
LS +G + R + +GC +G ++ ++TD L H+ +
Sbjct: 330 -------RHLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTDLSLKHISR 375
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESIN 330
GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L ++
Sbjct: 376 GLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLD 435
Query: 331 LSF-TGISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITD 386
+SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ RITD
Sbjct: 436 VSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITD 495
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
G LE+ L+ LTG+ +RIT GL + L L+ L L
Sbjct: 496 KG------------LELIAEHLSQ--LTGIDLYGC--TRITKRGLERITQLPCLKVLNLG 539
Query: 447 SCKVTANDIKRLQSRDLPNLVSFR 470
++T D ++ D L + R
Sbjct: 540 LWQMT--DSEKEARGDFSPLFTVR 561
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 365 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 424
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 425 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 484
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 485 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGC-----------------------TRITK 521
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 522 RGLERITQLPCLKVLNLGLWQMTD 545
>gi|18204097|gb|AAH21329.1| F-box and leucine-rich repeat protein 14 [Mus musculus]
Length = 400
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 169/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 325 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLP 381
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 382 CLKVLNLGLWQMTDS 396
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 179/371 (48%), Gaps = 54/371 (14%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-K 273
LS +G + R + +GC +G ++ ++TD L H+ +
Sbjct: 180 R-------HLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTDLSLKHISR 225
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESIN 330
GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L ++
Sbjct: 226 GLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLD 285
Query: 331 LSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITD 386
+SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ RITD
Sbjct: 286 VSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITD 345
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
G LE+ L+ LTG+ +RIT GL + L L+ L L
Sbjct: 346 KG------------LELIAEHLSQ--LTGIDLYGC--TRITKRGLERITQLPCLKVLNLG 389
Query: 447 SCKVTANDIKR 457
++T ++ R
Sbjct: 390 LWQMTDSEKVR 400
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
>gi|332249163|ref|XP_003273734.1| PREDICTED: F-box/LRR-repeat protein 14 isoform 2 [Nomascus
leucogenys]
gi|119609335|gb|EAW88929.1| F-box and leucine-rich repeat protein 14, isoform CRA_b [Homo
sapiens]
Length = 401
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 169/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 325 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLP 381
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 382 CLKVLNLGLWQMTDS 396
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 178/368 (48%), Gaps = 54/368 (14%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-K 273
LS +G + R + +GC +G ++ ++TD L H+ +
Sbjct: 180 R-------HLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTDLSLKHISR 225
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESIN 330
GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L ++
Sbjct: 226 GLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLD 285
Query: 331 LSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITD 386
+SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ RITD
Sbjct: 286 VSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITD 345
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
G LE+ L+ LTG+ +RIT GL + L L+ L L
Sbjct: 346 KG------------LELIAEHLSQ--LTGIDLYGC--TRITKRGLERITQLPCLKVLNLG 389
Query: 447 SCKVTAND 454
++T ++
Sbjct: 390 LWQMTDSE 397
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
>gi|395845616|ref|XP_003795523.1| PREDICTED: F-box/LRR-repeat protein 14 isoform 2 [Otolemur
garnettii]
Length = 401
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 169/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 325 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLP 381
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 382 CLKVLNLGLWQMTDS 396
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 181/372 (48%), Gaps = 55/372 (14%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-K 273
LS +G + R + +GC +G ++ ++TD L H+ +
Sbjct: 180 R-------HLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTDLSLKHISR 225
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESIN 330
GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L ++
Sbjct: 226 GLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLD 285
Query: 331 LSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITD 386
+SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ RITD
Sbjct: 286 VSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITD 345
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
G LE+ L+ LTG+ +RIT GL + L L+ L L
Sbjct: 346 KG------------LELIAEHLSQ--LTGIDLYGC--TRITKRGLERITQLPCLKVLNLG 389
Query: 447 SCKVTANDIKRL 458
++T ++ KRL
Sbjct: 390 LWQMTDSE-KRL 400
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
>gi|281349609|gb|EFB25193.1| hypothetical protein PANDA_001999 [Ailuropoda melanoleuca]
Length = 398
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 169/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 325 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLP 381
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 382 CLKVLNLGLWQMTDS 396
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 178/368 (48%), Gaps = 54/368 (14%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-K 273
LS +G + R + +GC +G ++ ++TD L H+ +
Sbjct: 180 R-------HLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTDLSLKHISR 225
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESIN 330
GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L ++
Sbjct: 226 GLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLD 285
Query: 331 LSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITD 386
+SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ RITD
Sbjct: 286 VSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITD 345
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
G LE+ L+ LTG+ +RIT GL + L L+ L L
Sbjct: 346 KG------------LELIAEHLSQ--LTGIDLYGC--TRITKRGLERITQLPCLKVLNLG 389
Query: 447 SCKVTAND 454
++T ++
Sbjct: 390 LWQMTDSE 397
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
>gi|410963525|ref|XP_003988315.1| PREDICTED: F-box/LRR-repeat protein 14, partial [Felis catus]
Length = 411
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 169/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 77 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 136
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 137 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 196
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 197 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 256
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 257 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 315
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 316 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLP 372
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 373 CLKVLNLGLWQMTDS 387
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 179/371 (48%), Gaps = 54/371 (14%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 59 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 112
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 113 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 170
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-K 273
LS +G + R + +GC +G ++ ++TD L H+ +
Sbjct: 171 R-------HLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTDLSLKHISR 216
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESIN 330
GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L ++
Sbjct: 217 GLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLD 276
Query: 331 LSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITD 386
+SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ RITD
Sbjct: 277 VSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITD 336
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
G LE+ L+ LTG+ +RIT GL + L L+ L L
Sbjct: 337 KG------------LELIAEHLSQ--LTGIDLYGC--TRITKRGLERITQLPCLKVLNLG 380
Query: 447 SCKVTANDIKR 457
++T ++ R
Sbjct: 381 LWQMTDSEKVR 391
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 206 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 265
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 266 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 325
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 326 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 362
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 363 RGLERITQLPCLKVLNLGLWQMTD 386
>gi|345791735|ref|XP_543882.2| PREDICTED: F-box/LRR-repeat protein 14 [Canis lupus familiaris]
Length = 420
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 167/311 (53%), Gaps = 32/311 (10%)
Query: 81 SNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-LVKLD 137
+N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L L+
Sbjct: 90 ANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVLE 149
Query: 138 LERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LKSLQI 187
L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+ L +
Sbjct: 150 LGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTL 209
Query: 188 S-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDD 243
C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C +SD
Sbjct: 210 QDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDT 269
Query: 244 GCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL----VN 295
G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 270 GIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQ 328
Query: 296 LTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L LK
Sbjct: 329 MHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLPCLKV 385
Query: 353 LNLDARQITDT 363
LNL Q+TD+
Sbjct: 386 LNLGLWQMTDS 396
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 179/371 (48%), Gaps = 54/371 (14%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-K 273
LS +G + R + +GC +G ++ ++TD L H+ +
Sbjct: 180 R-------HLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTDLSLKHISR 225
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESIN 330
GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L ++
Sbjct: 226 GLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLD 285
Query: 331 LSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITD 386
+SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ RITD
Sbjct: 286 VSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITD 345
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
G LE+ L+ LTG+ +RIT GL + L L+ L L
Sbjct: 346 KG------------LELIAEHLSQ--LTGIDLYGC--TRITKRGLERITQLPCLKVLNLG 389
Query: 447 SCKVTANDIKR 457
++T ++ R
Sbjct: 390 LWQMTDSEKVR 400
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
>gi|149175123|ref|ZP_01853746.1| hypothetical protein PM8797T_25626 [Planctomyces maris DSM 8797]
gi|148846101|gb|EDL60441.1| hypothetical protein PM8797T_25626 [Planctomyces maris DSM 8797]
Length = 1079
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 6/188 (3%)
Query: 239 QLSDDGCEKF------SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
QL+ +G +F +K GS +++ L +T E L L+ L+ L + +GDE
Sbjct: 36 QLAVEGLRRFCTNLQTNKDGSARLVRLSKPHVTLEALNQLEQFPRLDYLAMVCPHLGDEA 95
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
L+ + L NL L LS++ VG SGL L L LE + L T ++D L+ L+ L LK
Sbjct: 96 LLYIRDLTNLDTLMLSESAVGDSGLSCLKKLNKLERLYLDNTKVTDAGLQHLSSLKQLKV 155
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
L+L +TD G+ L L L L L G +++D+G L K L+ L + +T +
Sbjct: 156 LSLRNLNVTDQGMQTLADLNNLEVLFLSGTQVSDAGLKSLTELKQLKILYLARTAITGSQ 215
Query: 413 LTGLVSLN 420
L+ L +L
Sbjct: 216 LSALNTLE 223
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 118/244 (48%), Gaps = 5/244 (2%)
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLN---- 161
+ + R + +G++ F + K R R+ V L+ L +LE
Sbjct: 24 EKVAPVEARTPEQLAVEGLRRFCTNLQTNKDGSARLVRLSKPHVTLEALNQLEQFPRLDY 83
Query: 162 -IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC 220
C + D + + LTNL +L +S S V DSG++ LK L KL L L+ VT A
Sbjct: 84 LAMVCPHLGDEALLYIRDLTNLDTLMLSESAVGDSGLSCLKKLNKLERLYLDNTKVTDAG 143
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
L LS+L L L+L ++D G + + + +L+VL L +++D L L L L+
Sbjct: 144 LQHLSSLKQLKVLSLRNLNVTDQGMQTLADLNNLEVLFLSGTQVSDAGLKSLTELKQLKI 203
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
L L I L L L +L+ L L+ T++ + LSGLT L+ + + +TG+ + S
Sbjct: 204 LYLARTAITGSQLSALNTLESLEHLSLNRTKLQPVVVDALSGLTQLKGLEIQYTGLGESS 263
Query: 341 LRKL 344
+++L
Sbjct: 264 IQQL 267
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 98/209 (46%)
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
L+ L VT L+ L L YL + L D+ + +L L L + + D
Sbjct: 59 LVRLSKPHVTLEALNQLEQFPRLDYLAMVCPHLGDEALLYIRDLTNLDTLMLSESAVGDS 118
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
L LK L LE L LD+ + D GL +L+ L LK L L + V G++ L+ L NLE
Sbjct: 119 GLSCLKKLNKLERLYLDNTKVTDAGLQHLSSLKQLKVLSLRNLNVTDQGMQTLADLNNLE 178
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDS 387
+ LS T +SD L+ L L LK L L IT + L+AL +L L HL L ++
Sbjct: 179 VLFLSGTQVSDAGLKSLTELKQLKILYLARTAITGSQLSALNTLESLEHLSLNRTKLQPV 238
Query: 388 GAAYLRNFKNLRSLEICGGGLTDAGLTGL 416
L L+ LEI GL ++ + L
Sbjct: 239 VVDALSGLTQLKGLEIQYTGLGESSIQQL 267
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 6/214 (2%)
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
GS + L++ ++ + + + L L + + DE L++++ LTNL++L L
Sbjct: 55 GSARLVRLSKPHVTLEALNQLEQFPRLDYLAMVCPHLGDEALLYIRDLTNLDTLMLSESA 114
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
+GD GL L L L+ L L +T+V +GL+HLS L L+ ++L ++D ++ LA L
Sbjct: 115 VGDSGLSCLKKLNKLERLYLDNTKVTDAGLQHLSSLKQLKVLSLRNLNVTDQGMQTLADL 174
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGG 407
++L+ L L Q++D GL +LT L L L L IT S + L ++L L +
Sbjct: 175 NNLEVLFLSGTQVSDAGLKSLTELKQLKILYLARTAITGSQLSALNTLESLEHLSLNRTK 234
Query: 408 LTD------AGLTGLVSLNVSNSRITSAGLRHLK 435
L +GLT L L + + + + ++ LK
Sbjct: 235 LQPVVVDALSGLTQLKGLEIQYTGLGESSIQQLK 268
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
LS S V DSGL LK + L+ L + +++D GL+HL L L LS R N +T QG
Sbjct: 110 LSESAVGDSGLSCLKKLNKLERLYLD-NTKVTDAGLQHLSSLKQLKVLSLRNLN-VTDQG 167
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
M+ A L NL L L GL +L L +L+ L + IT S + L+ L +L+
Sbjct: 168 MQTLADLNNLEVLFLSGTQVSDAGLKSLTELKQLKILYLA-RTAITGSQLSALNTLESLE 226
Query: 184 SLQISCSK----VTD--SGIAYLKGLQ 204
L ++ +K V D SG+ LKGL+
Sbjct: 227 HLSLNRTKLQPVVVDALSGLTQLKGLE 253
>gi|115495249|ref|NP_001069415.1| F-box/LRR-repeat protein 14 [Bos taurus]
gi|225543352|ref|NP_598701.2| F-box/LRR-repeat protein 14 [Mus musculus]
gi|404312677|ref|NP_001258205.1| F-box/LRR-repeat protein 14 [Rattus norvegicus]
gi|296211085|ref|XP_002752262.1| PREDICTED: F-box/LRR-repeat protein 14 isoform 1 [Callithrix
jacchus]
gi|332249161|ref|XP_003273733.1| PREDICTED: F-box/LRR-repeat protein 14 isoform 1 [Nomascus
leucogenys]
gi|348555895|ref|XP_003463758.1| PREDICTED: F-box/LRR-repeat protein 14-like [Cavia porcellus]
gi|395845614|ref|XP_003795522.1| PREDICTED: F-box/LRR-repeat protein 14 isoform 1 [Otolemur
garnettii]
gi|48428059|sp|Q8BID8.1|FXL14_MOUSE RecName: Full=F-box/LRR-repeat protein 14; AltName: Full=F-box and
leucine-rich repeat protein 14
gi|122144674|sp|Q17R01.1|FXL14_BOVIN RecName: Full=F-box/LRR-repeat protein 14; AltName: Full=F-box and
leucine-rich repeat protein 14
gi|26351129|dbj|BAC39201.1| unnamed protein product [Mus musculus]
gi|74196388|dbj|BAE33081.1| unnamed protein product [Mus musculus]
gi|109659305|gb|AAI18094.1| F-box and leucine-rich repeat protein 14 [Bos taurus]
gi|119609336|gb|EAW88930.1| F-box and leucine-rich repeat protein 14, isoform CRA_c [Homo
sapiens]
gi|148667199|gb|EDK99615.1| F-box and leucine-rich repeat protein 14 [Mus musculus]
gi|149049602|gb|EDM02056.1| rCG29594 [Rattus norvegicus]
gi|296487055|tpg|DAA29168.1| TPA: F-box/LRR-repeat protein 14 [Bos taurus]
Length = 400
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 169/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 325 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLP 381
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 382 CLKVLNLGLWQMTDS 396
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 179/371 (48%), Gaps = 54/371 (14%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-K 273
LS +G + R + +GC +G ++ ++TD L H+ +
Sbjct: 180 R-------HLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTDLSLKHISR 225
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESIN 330
GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L ++
Sbjct: 226 GLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLD 285
Query: 331 LSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITD 386
+SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ RITD
Sbjct: 286 VSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITD 345
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
G LE+ L+ LTG+ +RIT GL + L L+ L L
Sbjct: 346 KG------------LELIAEHLSQ--LTGIDLYGC--TRITKRGLERITQLPCLKVLNLG 389
Query: 447 SCKVTANDIKR 457
++T ++ R
Sbjct: 390 LWQMTDSEKVR 400
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
>gi|47219755|emb|CAG03382.1| unnamed protein product [Tetraodon nigroviridis]
Length = 388
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 158/327 (48%), Gaps = 46/327 (14%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFA-----GLINLVKLDLERCTRIHGGLVNLKGLMKL 157
RG+ + LS RR+ + QGM G NL L G ++ + L
Sbjct: 71 RGIKKVQILSLRRSLSYVIQGMPHIESLNLCGCFNLTDNGL--------GHAFVQDIPSL 122
Query: 158 ESLNIKWCNCITDSDMKPLSG-LTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ L NL+ L++ CS +T++G+ + GL +L LNL C
Sbjct: 123 RVLNLSLCKQITDSSLGRIAQYLKNLEVLELGGCSNITNTGLLLVAWGLHRLKSLNLRSC 182
Query: 215 -PVTAACLDSLSALG--------SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
V+ + LS + SL L L CQ L+D + SK + LKVLNL F
Sbjct: 183 RHVSDVGIGHLSGMTRSAAEGCLSLEKLTLQDCQKLTDLSLKHVSKGLNKLKVLNLSFCG 242
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRH 319
I+D ++HL +T+L SLNL SC I D G+++L G L L++S ++G L H
Sbjct: 243 GISDGGMIHLSHMTHLCSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKIGDQSLAH 302
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALT-SLTGLTHL 377
++ G+ DG R + + LK+LN+ +ITD GL + LT LT +
Sbjct: 303 IA------------QGLDDGINRMVRQMHELKTLNIGQCGRITDKGLELIADHLTQLTGI 350
Query: 378 DLFG-ARITDSGAAYLRNFKNLRSLEI 403
DL+G +IT G + L+ L +
Sbjct: 351 DLYGCTKITKRGLERITQLPCLKVLNL 377
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 152/310 (49%), Gaps = 69/310 (22%)
Query: 68 DVTDSGLIH--LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMK 125
++TD+GL H ++D +L+ L+ + C QI+D L + AQ +K
Sbjct: 105 NLTDNGLGHAFVQDIPSLRVLNLSLCKQITDSSLGRI------------------AQYLK 146
Query: 126 AFAGLINLVKLDLERCTRI--HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT--- 180
NL L+L C+ I G L+ GL +L+SLN++ C ++D + LSG+T
Sbjct: 147 ------NLEVLELGGCSNITNTGLLLVAWGLHRLKSLNLRSCRHVSDVGIGHLSGMTRSA 200
Query: 181 -----NLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFY 232
+L+ L + C K+TD + ++ KGL KL +LNL C ++ + LS + L
Sbjct: 201 AEGCLSLEKLTLQDCQKLTDLSLKHVSKGLNKLKVLNLSFCGGISDGGMIHLSHMTHLCS 260
Query: 233 LNLNRC-QLSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL------------KGLT 276
LNL C +SD G + +GSL++ L++ F ++I D+ L H+ + +
Sbjct: 261 LNLRSCDNISDTGIMHLA-MGSLRLSGLDVSFCDKIGDQSLAHIAQGLDDGINRMVRQMH 319
Query: 277 NLESLNLDSCG-IGDEG-------LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
L++LN+ CG I D+G L LTG+ C T++ GL ++ L L+
Sbjct: 320 ELKTLNIGQCGRITDKGLELIADHLTQLTGIDLYGC-----TKITKRGLERITQLPCLKV 374
Query: 329 INLSFTGISD 338
+NL +++
Sbjct: 375 LNLGLWQMTE 384
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 154/320 (48%), Gaps = 63/320 (19%)
Query: 176 LSGLTNLKSLQI-SCSKVTDSGI--AYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
+ G+ +++SL + C +TD+G+ A+++ + L +LNL C S+LG +
Sbjct: 89 IQGMPHIESLNLCGCFNLTDNGLGHAFVQDIPSLRVLNLSLCKQITD-----SSLGRIAQ 143
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDE 291
N L GC + G L V GL L+SLNL SC + D
Sbjct: 144 YLKNLEVLELGGCSNITNTGLLLVA---------------WGLHRLKSLNLRSCRHVSDV 188
Query: 292 GLVNLTGLC--------NLKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSFTG-ISDGS 340
G+ +L+G+ +L+ L L D Q + L+H+S GL L+ +NLSF G ISDG
Sbjct: 189 GIGHLSGMTRSAAEGCLSLEKLTLQDCQKLTDLSLKHVSKGLNKLKVLNLSFCGGISDGG 248
Query: 341 LRKLAGLSSLKSLNLDA-RQITDTGLA--ALTSLTGLTHLDL-FGARITDSGAAYL---- 392
+ L+ ++ L SLNL + I+DTG+ A+ SL L+ LD+ F +I D A++
Sbjct: 249 MIHLSHMTHLCSLNLRSCDNISDTGIMHLAMGSLR-LSGLDVSFCDKIGDQSLAHIAQGL 307
Query: 393 --------RNFKNLRSLEI--CGGGLTDAG-------LTGLVSLNVSN-SRITSAGLRHL 434
R L++L I C G +TD G LT L +++ ++IT GL +
Sbjct: 308 DDGINRMVRQMHELKTLNIGQC-GRITDKGLELIADHLTQLTGIDLYGCTKITKRGLERI 366
Query: 435 KPLKNLRSLTLESCKVTAND 454
L L+ L L ++T ++
Sbjct: 367 TQLPCLKVLNLGLWQMTESE 386
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 130/252 (51%), Gaps = 29/252 (11%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEH 101
+ D + IA +L ++L G S++T++GL+ + L+SL+ C +SD G+ H
Sbjct: 133 ITDSSLGRIAQYLKNLEVLELGGCSNITNTGLLLVAWGLHRLKSLNLRSCRHVSDVGIGH 192
Query: 102 LRGLS--------NLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRIH-GGLVNL 151
L G++ +L L+ + +T +K + GL L L+L C I GG+++L
Sbjct: 193 LSGMTRSAAEGCLSLEKLTLQDCQKLTDLSLKHVSKGLNKLKVLNLSFCGGISDGGMIHL 252
Query: 152 KGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYL--------- 200
+ L SLN++ C+ I+D+ + L+ G L L +S C K+ D +A++
Sbjct: 253 SHMTHLCSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKIGDQSLAHIAQGLDDGIN 312
Query: 201 ---KGLQKLTLLNLEGC-PVTAACLDSLS-ALGSLFYLNLNRC-QLSDDGCEKFSKIGSL 254
+ + +L LN+ C +T L+ ++ L L ++L C +++ G E+ +++ L
Sbjct: 313 RMVRQMHELKTLNIGQCGRITDKGLELIADHLTQLTGIDLYGCTKITKRGLERITQLPCL 372
Query: 255 KVLNLGFNEITD 266
KVLNLG ++T+
Sbjct: 373 KVLNLGLWQMTE 384
>gi|301756605|ref|XP_002914145.1| PREDICTED: f-box/LRR-repeat protein 14-like [Ailuropoda
melanoleuca]
Length = 420
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 167/311 (53%), Gaps = 32/311 (10%)
Query: 81 SNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-LVKLD 137
+N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L L+
Sbjct: 90 ANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVLE 149
Query: 138 LERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LKSLQI 187
L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+ L +
Sbjct: 150 LGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTL 209
Query: 188 S-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDD 243
C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C +SD
Sbjct: 210 QDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDT 269
Query: 244 GCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL----VN 295
G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 270 GIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQ 328
Query: 296 LTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L LK
Sbjct: 329 MHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLPCLKV 385
Query: 353 LNLDARQITDT 363
LNL Q+TD+
Sbjct: 386 LNLGLWQMTDS 396
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 179/371 (48%), Gaps = 54/371 (14%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-K 273
LS +G + R + +GC +G ++ ++TD L H+ +
Sbjct: 180 R-------HLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTDLSLKHISR 225
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESIN 330
GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L ++
Sbjct: 226 GLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLD 285
Query: 331 LSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITD 386
+SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ RITD
Sbjct: 286 VSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITD 345
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
G LE+ L+ LTG+ +RIT GL + L L+ L L
Sbjct: 346 KG------------LELIAEHLSQ--LTGIDLYGC--TRITKRGLERITQLPCLKVLNLG 389
Query: 447 SCKVTANDIKR 457
++T ++ R
Sbjct: 390 LWQMTDSEKVR 400
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
>gi|299067411|emb|CBJ38610.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
solanacearum CMR15]
Length = 620
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 163/388 (42%), Gaps = 20/388 (5%)
Query: 83 LQSLDFNFCI--QISDGGLEHLRGLS----NLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
L+ L+ C IS GL HL + NLT + I +G + A +LV L
Sbjct: 164 LEHLEIGRCTGSAISAEGLAHLAEMPLKSLNLTGIE------IGVEGARTLAASTSLVSL 217
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG 196
L C L ++SL++ N I + L+ L SL + +++ D G
Sbjct: 218 TLIGCGIGDRAAQALAASQSIKSLDLS-VNMIGRDGAQALAA-APLTSLNLYYNEIGDDG 275
Query: 197 IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 256
L + LT L+ + A ++L+ L LNL + G + SL
Sbjct: 276 AGALAASKTLTSLDASKNGIGNAGAEALAKNTVLRELNLAHNMIGTPGVRALAGNTSLTE 335
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
L+LG N + D + L G +L SL +D IG G L L L+LS +G G
Sbjct: 336 LDLGGNRLGDAGALELAGNRSLLSLKVDHNEIGGGGAQALARHATLTSLDLSYNAIGLWG 395
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
L T L +NLSF GI S LA SL L L+ I D G L LT
Sbjct: 396 AGALGANTTLSVLNLSFCGIDSHSACALACNKSLAELYLNGNWIGDYGALELAKNRTLTL 455
Query: 377 LDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLV------SLNVSNSRITSAG 430
LDL I ++GA L + L SL++ G G+ D G L +L++S +RI + G
Sbjct: 456 LDLSRNGIRNAGAEALGGNQALTSLKLAGNGIDDDGAAALARHPRLTTLDLSRNRIGAEG 515
Query: 431 LRHLKPLKNLRSLTLESCKVTANDIKRL 458
RHL L L L ++ + + L
Sbjct: 516 ARHLAQSATLAELDLSQNRIGPDGAEAL 543
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 150/336 (44%), Gaps = 3/336 (0%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+ L S++L +++ D G L L SLD + I + G E L + L L+ +
Sbjct: 259 APLTSLNLYYNEIGDDGAGALAASKTLTSLDASKN-GIGNAGAEALAKNTVLRELNLA-H 316
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N I G++A AG +L +LDL G + L G L SL + N I + L
Sbjct: 317 NMIGTPGVRALAGNTSLTELDLGGNRLGDAGALELAGNRSLLSLKVD-HNEIGGGGAQAL 375
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+ L SL +S + + G L L++LNL C + + +L+ SL L LN
Sbjct: 376 ARHATLTSLDLSYNAIGLWGAGALGANTTLSVLNLSFCGIDSHSACALACNKSLAELYLN 435
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
+ D G + +K +L +L+L N I + L G L SL L GI D+G L
Sbjct: 436 GNWIGDYGALELAKNRTLTLLDLSRNGIRNAGAEALGGNQALTSLKLAGNGIDDDGAAAL 495
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
L L+LS ++G+ G RHL+ L ++LS I L+ ++L +LN+
Sbjct: 496 ARHPRLTTLDLSRNRIGAEGARHLAQSATLAELDLSQNRIGPDGAEALSQSTALITLNVS 555
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
I + G +L LT LD I + GA L
Sbjct: 556 HNAIGEAGARSLADSASLTSLDARRNGIGEDGAKVL 591
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 164/404 (40%), Gaps = 22/404 (5%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+SL+S+ L G + D L +++SLD + + DG + LTSL+ N
Sbjct: 212 TSLVSLTLIGCGIGDRAAQALAASQSIKSLDLSVNMIGRDGA--QALAAAPLTSLNLYYN 269
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
I G A A L LD + + G L L LN+ N I ++ L
Sbjct: 270 E-IGDDGAGALAASKTLTSLDASKNGIGNAGAEALAKNTVLRELNLA-HNMIGTPGVRAL 327
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+G T+L L + +++ D+G L G + L L ++ + +L+ +L L+L+
Sbjct: 328 AGNTSLTELDLGGNRLGDAGALELAGNRSLLSLKVDHNEIGGGGAQALARHATLTSLDLS 387
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
+ G +L VLNL F I L +L L L+ IGD G + L
Sbjct: 388 YNAIGLWGAGALGANTTLSVLNLSFCGIDSHSACALACNKSLAELYLNGNWIGDYGALEL 447
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
L L+LS + ++G L G L S+ L+ GI D LA L +L+L
Sbjct: 448 AKNRTLTLLDLSRNGIRNAGAEALGGNQALTSLKLAGNGIDDDGAAALARHPRLTTLDLS 507
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL 416
+I G L L LDL RI GA L T L
Sbjct: 508 RNRIGAEGARHLAQSATLAELDLSQNRIGPDGAEALSQS------------------TAL 549
Query: 417 VSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
++LNVS++ I AG R L +L SL + + K L++
Sbjct: 550 ITLNVSHNAIGEAGARSLADSASLTSLDARRNGIGEDGAKVLEA 593
>gi|422811192|ref|ZP_16859602.1| internalin P4 [Listeria monocytogenes FSL J1-208]
gi|378750825|gb|EHY61417.1| internalin P4 [Listeria monocytogenes FSL J1-208]
Length = 776
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 154/338 (45%), Gaps = 64/338 (18%)
Query: 100 EHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES 159
+ L + N+++ S +N + +G++ L NL +L LE L L GL+KLE
Sbjct: 72 DELNSVENISADSGLYDNVASIEGVQY---LNNLTELRLENVDNSVSDLRPLSGLIKLEV 128
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
++ SD+ PLS L NL SL ++ ++++D I+ L LT LN+ + +
Sbjct: 129 ISFYHSQI---SDLSPLSELINLTSLTLNDNQISD--ISPLANSTNLTTLNMSSNKI--S 181
Query: 220 CLDSLSALGSLFYLNLNRCQLSD--------------DGCEKFSKIGSLK------VLNL 259
L LS L +L L+ Q+SD K S I L LN+
Sbjct: 182 DLSPLSNLSNLNKLDFRENQISDLSPLSGLINLTSLTINANKISDISPLANLTNLTTLNM 241
Query: 260 GFNEITDEC--------------------LVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
G N+ITD + L LTNL SL++D I D L +L+ L
Sbjct: 242 GINQITDLSSLSGLISLVDLHLSVNQITDISALSDLTNLRSLDIDHNQIID--LSSLSNL 299
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 359
NLK L L D Q+ S + LSGL NL + + + D + L+ L++L+ L +D+ Q
Sbjct: 300 TNLKRLHLVDNQI--SSITPLSGLINLTDLEIRINQVKD--VSPLSSLANLEMLYVDSNQ 355
Query: 360 ITDTGLAALTSLTGLTHLDLFGAR---ITDSGAAYLRN 394
I+D ++SL L +L LF A I + Y +N
Sbjct: 356 ISD-----ISSLKNLKNLVLFSAHSQTIVNKPVNYQKN 388
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 96/179 (53%), Gaps = 24/179 (13%)
Query: 275 LTNLESLNLDSCGIGD-----EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
L ++E+++ DS G+ D EG+ L L L+ LE D V S LR LSGL LE I
Sbjct: 74 LNSVENISADS-GLYDNVASIEGVQYLNNLTELR-LENVDNSV--SDLRPLSGLIKLEVI 129
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGA 389
+ + ISD L L+ L +L SL L+ QI+D ++ L + T LT L++ +I+D
Sbjct: 130 SFYHSQISD--LSPLSELINLTSLTLNDNQISD--ISPLANSTNLTTLNMSSNKISD--L 183
Query: 390 AYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
+ L N NL L+ ++D +GL L SL ++ ++I+ + PL NL +LT
Sbjct: 184 SPLSNLSNLNKLDFRENQISDLSPLSGLINLTSLTINANKISD-----ISPLANLTNLT 237
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 116/226 (51%), Gaps = 23/226 (10%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
+ ++L ++++S + ++D L L + SNL LDF QISD L L GL NLTSL+
Sbjct: 165 ANSTNLTTLNMSSNKISD--LSPLSNLSNLNKLDFREN-QISD--LSPLSGLINLTSLTI 219
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
NA + A L NL L++ +I + ++ L++ N IT D+
Sbjct: 220 ---NANKISDISPLANLTNLTTLNM-GINQITDLSSLSGLISLVD-LHLS-VNQIT--DI 271
Query: 174 KPLSGLTNLKSLQISCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
LS LTNL+SL I +++ D S ++ L L++L L++ + +T LS L +L
Sbjct: 272 SALSDLTNLRSLDIDHNQIIDLSSLSNLTNLKRLHLVDNQISSITP-----LSGLINLTD 326
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
L + Q+ D S + +L++L + N+I+D + LK L NL
Sbjct: 327 LEIRINQVKD--VSPLSSLANLEMLYVDSNQISD--ISSLKNLKNL 368
>gi|334117577|ref|ZP_08491668.1| leucine-rich repeat-containing protein [Microcoleus vaginatus
FGP-2]
gi|333460686|gb|EGK89294.1| leucine-rich repeat-containing protein [Microcoleus vaginatus
FGP-2]
Length = 348
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 140/259 (54%), Gaps = 22/259 (8%)
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
D+KPL+ LTNL L + +++ D I L L LT L+L P+ + L++L +L
Sbjct: 91 DIKPLASLTNLTWLFLGSNQIGD--IKPLASLTNLTRLSLSENPI--GDIKPLASLTNLT 146
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
+L+L+ Q+ D + + + +L +L L N+I D + L LTNL L L IGD
Sbjct: 147 FLDLSDNQIGD--IKPLASLTNLTILFLSDNQIGD--IKPLASLTNLTFLFLSDNKIGD- 201
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
+ L L NL L+LSD Q+G ++ L+ LTNL S++LS I G ++ LA L++L
Sbjct: 202 -IKPLASLTNLTFLDLSDNQIGD--IKPLASLTNLSSLDLSDNRI--GDIKPLASLTNLT 256
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD- 410
LNL QI D + L SLT LT L+L G I D L + NLRSL++ + D
Sbjct: 257 RLNLLDNQIGD--IKPLASLTNLTRLNLDGNVIGD--IKPLASLTNLRSLDLSRNVIGDI 312
Query: 411 ---AGLTGLVSLNVSNSRI 426
A LT L L++S + I
Sbjct: 313 KPLASLTKLTVLHLSGNEI 331
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 136/269 (50%), Gaps = 20/269 (7%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
L+ D+ D+ + +K ++L +L + F G ++ L L+NLT LS N
Sbjct: 79 LTKLDLFDNQIGDIKPLASLTNLTWLFLGSNQIGDIKPLASLTNLTRLSLSEN---PIGD 135
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+K A L NL LDL + ++K L L +L I + + D+KPL+ LTNL
Sbjct: 136 IKPLASLTNLTFLDLS-----DNQIGDIKPLASLTNLTILFLSDNQIGDIKPLASLTNLT 190
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
L +S +K+ D I L L LT L+L + + L++L +L L+L+ ++ D
Sbjct: 191 FLFLSDNKIGD--IKPLASLTNLTFLDLSDNQI--GDIKPLASLTNLSSLDLSDNRIGD- 245
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
+ + + +L LNL N+I D + L LTNL LNLD IGD + L L NL+
Sbjct: 246 -IKPLASLTNLTRLNLLDNQIGD--IKPLASLTNLTRLNLDGNVIGD--IKPLASLTNLR 300
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLS 332
L+LS +G ++ L+ LT L ++LS
Sbjct: 301 SLDLSRNVIGD--IKPLASLTKLTVLHLS 327
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 95/184 (51%), Gaps = 22/184 (11%)
Query: 250 KIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSD 309
K+ SL L+L N+I D + L LTNL L L S IGD + L L NL L LS+
Sbjct: 75 KLSSLTKLDLFDNQIGD--IKPLASLTNLTWLFLGSNQIGD--IKPLASLTNLTRLSLSE 130
Query: 310 TQVGSSGLRHLSGLTNLESINLSFTGISD---GSLRKLAGLSSLKSLNLDARQITDTGLA 366
+G ++ L+ LTNL +F +SD G ++ LA L++L L L QI D +
Sbjct: 131 NPIGD--IKPLASLTNL-----TFLDLSDNQIGDIKPLASLTNLTILFLSDNQIGD--IK 181
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVS 422
L SLT LT L L +I D L + NL L++ + D A LT L SL++S
Sbjct: 182 PLASLTNLTFLFLSDNKIGD--IKPLASLTNLTFLDLSDNQIGDIKPLASLTNLSSLDLS 239
Query: 423 NSRI 426
++RI
Sbjct: 240 DNRI 243
>gi|22748931|ref|NP_689654.1| F-box/LRR-repeat protein 14 [Homo sapiens]
gi|386782025|ref|NP_001247451.1| F-box/LRR-repeat protein 14 [Macaca mulatta]
gi|390467358|ref|XP_003733751.1| PREDICTED: F-box/LRR-repeat protein 14 isoform 2 [Callithrix
jacchus]
gi|402884767|ref|XP_003905846.1| PREDICTED: F-box/LRR-repeat protein 14 [Papio anubis]
gi|441670511|ref|XP_004092204.1| PREDICTED: F-box/LRR-repeat protein 14 [Nomascus leucogenys]
gi|48428083|sp|Q8N1E6.1|FXL14_HUMAN RecName: Full=F-box/LRR-repeat protein 14; AltName: Full=F-box and
leucine-rich repeat protein 14
gi|20381419|gb|AAH28132.1| F-box and leucine-rich repeat protein 14 [Homo sapiens]
gi|119609334|gb|EAW88928.1| F-box and leucine-rich repeat protein 14, isoform CRA_a [Homo
sapiens]
gi|312150528|gb|ADQ31776.1| F-box and leucine-rich repeat protein 14 [synthetic construct]
gi|355563880|gb|EHH20380.1| F-box and leucine-rich repeat protein 14 [Macaca mulatta]
gi|384945426|gb|AFI36318.1| F-box/LRR-repeat protein 14 [Macaca mulatta]
gi|410217776|gb|JAA06107.1| F-box and leucine-rich repeat protein 14 [Pan troglodytes]
Length = 418
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 169/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 325 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLP 381
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 382 CLKVLNLGLWQMTDS 396
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 183/386 (47%), Gaps = 56/386 (14%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-K 273
LS +G + R + +GC +G ++ ++TD L H+ +
Sbjct: 180 R-------HLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTDLSLKHISR 225
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESIN 330
GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L ++
Sbjct: 226 GLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLD 285
Query: 331 LSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITD 386
+SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ RITD
Sbjct: 286 VSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITD 345
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
G LE+ L+ LTG+ +RIT GL + L L+ L L
Sbjct: 346 KG------------LELIAEHLSQ--LTGIDLYGC--TRITKRGLERITQLPCLKVLNLG 389
Query: 447 SCKVTANDIKRLQSRDLPNLVSFRPE 472
++T D ++ D L + R
Sbjct: 390 LWQMT--DSEKEARGDFSPLFTVRTR 413
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
>gi|72385461|ref|XP_846398.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|25956236|emb|CAB95328.2| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 1448
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 211/504 (41%), Gaps = 79/504 (15%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC 91
AL +L L G+N W + Q L LS + +TD + H +C NL +LD +FC
Sbjct: 610 ALNELNLSNCFGINAGWEALEKLQ--QLHVAILSNTHITDRDISHFSNCKNLITLDLSFC 667
Query: 92 IQISDGGLEHLRGLSNLTSLS-------------------FRRNNAITAQGMKAFAGLI- 131
++ D + LSN+T+L R + +G++ +I
Sbjct: 668 NKLLD-----VTALSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIKGVQLEDSVIV 722
Query: 132 ------NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
+ V+L LE C + G + L L+ LE LN+ +C+ +T S M L L L+ L
Sbjct: 723 SLGNGNSFVRLSLENC-KGFGDVAPLSNLVTLEELNLHYCDKVT-SGMGTLGRLPQLRVL 780
Query: 186 QISCSKVTD------------------------SGIAYLKGLQKLTLLNLEGCPVTAACL 221
+ ++V D + I+ + L L LN++ C +
Sbjct: 781 DLGRTQVDDNSLENICTCSSPLVSLNLSNCKKITSISAIASLTALEELNIDNCCNVTSGW 840
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLES 280
+ L L L+ + +D+ S+ SL LNL F +ITD + L +T LE
Sbjct: 841 NVFGTLHQLRVATLSNTRTNDENVRHVSECKSLNTLNLAFCKDITD--VTALSKITMLEE 898
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG- 339
LNLD C +G+ L L + L + + +G + S L N +S+ S G
Sbjct: 899 LNLDCCHNIRKGIETLGTLPKARILSMKECYMGDGYAQQCSILGNSKSLVKLNLERSRGR 958
Query: 340 -SLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF-- 395
S++ L+ +++L+ L LD AR++ + S + L L + + TD +N
Sbjct: 959 ISVKALSNVATLEELVLDHARKV-----CCIPSFSCLPRLRVLNLKYTDINGDVTKNISE 1013
Query: 396 -KNLRSLEICG-GGLTDAGLTGLVSL----NVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
K+LRSL + +TD + + NV+ G L L LR L K
Sbjct: 1014 SKSLRSLNLSHCKWVTDISVLSSLLTLEELNVNCCNGIRKGWESLGKLPLLRVAILSDTK 1073
Query: 450 VTANDIKRLQS-RDLPNLVSFRPE 472
+TA DI L S + L L F+ E
Sbjct: 1074 ITAKDIACLSSCKKLVKLKFFQCE 1097
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 184/469 (39%), Gaps = 105/469 (22%)
Query: 65 SGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
SG V D+ L L DC +L+ L+ ++ IQ++D + LSN T++
Sbjct: 357 SGVPVEDNCLKDLCDCGSLERLNISYRIQLTD-----INPLSNATAIE------------ 399
Query: 125 KAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC------------------- 165
+L+L C RI G+ + L KL L++K
Sbjct: 400 ----------ELNLNGCRRITRGIGVVWALPKLRVLHMKDVHLSEPSLDSVGTGGPLVKV 449
Query: 166 ---NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
NC DM LS + L+ L I SG+ L L L +LN++ +++
Sbjct: 450 SLDNCAGFGDMTLLSSIVTLEELNIQKCADIISGVGCLGTLPYLRVLNIKEAHISSLDFT 509
Query: 223 SLSALGSLFYLN-----------------------LNRCQLSDDGCEKFSKIGSLKVLNL 259
+ A SL LN L+ C D G + LK+L+L
Sbjct: 510 GIGASKSLLQLNMESITGLSNVEALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDL 569
Query: 260 GFNEITDECL-----------------------VHLKGLTNLESLNLDSCGIGDEGLVNL 296
+E L H+ L L LNL +C + G L
Sbjct: 570 SGTNTDNESLRSLCLSQTVVSLNLSHCWKMTNVSHISSLEALNELNLSNCFGINAGWEAL 629
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL 355
L L LS+T + + H S NL +++LSF + D + L+ +++L+ LNL
Sbjct: 630 EKLQQLHVAILSNTHITDRDISHFSNCKNLITLDLSFCNKLLD--VTALSNITTLEELNL 687
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN---FKNLRSLEICGGGLTDAG 412
D+ GL+ L L L L++ G ++ DS L N F L SLE C G A
Sbjct: 688 DSCSNIRKGLSVLGELPRLCVLNIKGVQLEDSVIVSLGNGNSFVRL-SLENCKGFGDVAP 746
Query: 413 LTGLVS---LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
L+ LV+ LN+ ++G+ L L LR L L +V N ++ +
Sbjct: 747 LSNLVTLEELNLHYCDKVTSGMGTLGRLPQLRVLDLGRTQVDDNSLENI 795
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 166/379 (43%), Gaps = 41/379 (10%)
Query: 101 HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL 160
HL + L L+ +T ++ + L NL L+L + + KL L
Sbjct: 251 HLFNIGTLEELAITDTMQLT--NIRGISRLTNLKCLELNSTNIDDSCVEEISACAKLSKL 308
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC 220
I CN ITD+ P+S L L+ L +S +T GI L L +L +L+L G PV C
Sbjct: 309 CISKCNNITDA--TPISQLAALEELNLSNCHIT-KGIGTLGMLLRLRMLDLSGVPVEDNC 365
Query: 221 LDSLSALGSLFYLNLN-RCQLSD---------------DGCEKFSK-------IGSLKVL 257
L L GSL LN++ R QL+D +GC + ++ + L+VL
Sbjct: 366 LKDLCDCGSLERLNISYRIQLTDINPLSNATAIEELNLNGCRRITRGIGVVWALPKLRVL 425
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
++ +++ L + L ++LD+C G GD L L+ + L+ L + SG
Sbjct: 426 HMKDVHLSEPSLDSVGTGGPLVKVSLDNCAGFGDMTL--LSSIVTLEELNIQKCADIISG 483
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD-TGLAALTSLTGLT 375
+ L L L +N+ IS + SL LN+++ IT + + AL ++ L
Sbjct: 484 VGCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNMES--ITGLSNVEALANILTLE 541
Query: 376 HLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL------VSLNVSNSRITSA 429
L L G D+G L N L+ L++ G + L L VSLN+S+
Sbjct: 542 KLSLHGCTGIDAGIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTVVSLNLSHC-WKMT 600
Query: 430 GLRHLKPLKNLRSLTLESC 448
+ H+ L+ L L L +C
Sbjct: 601 NVSHISSLEALNELNLSNC 619
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 148/331 (44%), Gaps = 29/331 (8%)
Query: 133 LVKLDLERCTRIHGGLVNLKGL---MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISC 189
L++L++E T GL N++ L + LE L++ C I D+ + L L LK L +S
Sbjct: 517 LLQLNMESIT----GLSNVEALANILTLEKLSLHGCTGI-DAGIGCLGNLPQLKMLDLSG 571
Query: 190 SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS 249
+ + + L Q + LNL C + +S+L +L LNL+ C + G E
Sbjct: 572 TNTDNESLRSLCLSQTVVSLNLSHC-WKMTNVSHISSLEALNELNLSNCFGINAGWEALE 630
Query: 250 KIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE--- 306
K+ L V L ITD + H NL +L+L C L+++T L N+ LE
Sbjct: 631 KLQQLHVAILSNTHITDRDISHFSNCKNLITLDLSFCN----KLLDVTALSNITTLEELN 686
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD-ARQITDTGL 365
L GL L L L +N+ + D + L +S L+L+ + D +
Sbjct: 687 LDSCSNIRKGLSVLGELPRLCVLNIKGVQLEDSVIVSLGNGNSFVRLSLENCKGFGD--V 744
Query: 366 AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL-------TGLVS 418
A L++L L L+L SG L LR L++ + D L + LVS
Sbjct: 745 APLSNLVTLEELNLHYCDKVTSGMGTLGRLPQLRVLDLGRTQVDDNSLENICTCSSPLVS 804
Query: 419 LNVSN-SRITSAGLRHLKPLKNLRSLTLESC 448
LN+SN +ITS + + L L L +++C
Sbjct: 805 LNLSNCKKITS--ISAIASLTALEELNIDNC 833
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 138/324 (42%), Gaps = 47/324 (14%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISD-------------------GGLEHLRG 104
LS + +T + L C L L F C ++SD GL+ L
Sbjct: 1069 LSDTKITAKDIACLSSCKKLVKLKFFQCEKLSDVTVVYKIQSLEELIVTSCSDGLKGLNA 1128
Query: 105 LSNLTSLSFR--RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
L L L F RN + +++ +LV+L +E + + L + LE L++
Sbjct: 1129 LGTLPRLRFHHLRNVRGSDISVESIGTSKSLVRLHIEVGEEL-TDITPLSNITSLEELSL 1187
Query: 163 KWCNCITDSDMKP-----LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
+ D P L L LKSL + S+++DS + + + +T LNL+
Sbjct: 1188 R------DYRKPPEGVGTLGKLPRLKSLDLGLSRISDSTLYCICLSRSITSLNLDS-SWK 1240
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNE-ITDECLVHLKGLT 276
+ +S L +L LNL C G E S++ L+VLNL F T + ++
Sbjct: 1241 LTDISHISNLTALEELNLGGCYYITSGWEALSELPRLRVLNLEFTRATTRDGGYYISRCK 1300
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVG-----SSGLRHLSGLTNLESINL 331
L +LNL+ C + D + L N+K LE + +G + G L L L +NL
Sbjct: 1301 YLVTLNLELCDMTDA-----SCLANIKTLE--ELHIGGCDELTQGFSALFTLPQLRILNL 1353
Query: 332 SFTGISDGSLRKLAGLSSLKSLNL 355
+ I+D LR++ +++ LNL
Sbjct: 1354 ICSLITDEDLREIQPPHTIEELNL 1377
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 127/485 (26%), Positives = 197/485 (40%), Gaps = 117/485 (24%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISD-------GGLEHL---------RGLSN 107
LS + D + H+ +C +L +L+ FC I+D LE L +G+
Sbjct: 854 LSNTRTNDENVRHVSECKSLNTLNLAFCKDITDVTALSKITMLEELNLDCCHNIRKGIET 913
Query: 108 LTSLSFRRNNAIT--------AQGMKAFAGLINLVKLDLERCT-RI-------------- 144
L +L R ++ AQ +LVKL+LER RI
Sbjct: 914 LGTLPKARILSMKECYMGDGYAQQCSILGNSKSLVKLNLERSRGRISVKALSNVATLEEL 973
Query: 145 ---HGGLV----NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSG 196
H V + L +L LN+K+ + I K +S +L+SL +S C VTD
Sbjct: 974 VLDHARKVCCIPSFSCLPRLRVLNLKYTD-INGDVTKNISESKSLRSLNLSHCKWVTDIS 1032
Query: 197 IAY-------------------LKGLQKLTLLN---LEGCPVTAACLDSLSALGSLFYLN 234
+ + L KL LL L +TA + LS+ L L
Sbjct: 1033 VLSSLLTLEELNVNCCNGIRKGWESLGKLPLLRVAILSDTKITAKDIACLSSCKKLVKLK 1092
Query: 235 LNRCQ-LSD-------------------DGCEKFSKIGSLKVL------NLGFNEITDEC 268
+C+ LSD DG + + +G+L L N+ ++I+ E
Sbjct: 1093 FFQCEKLSDVTVVYKIQSLEELIVTSCSDGLKGLNALGTLPRLRFHHLRNVRGSDISVES 1152
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE---LSDTQVGSSGLRHLSGLTN 325
+ K L L +G+E L ++T L N+ LE L D + G+ L L
Sbjct: 1153 IGTSKSLVRLH------IEVGEE-LTDITPLSNITSLEELSLRDYRKPPEGVGTLGKLPR 1205
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDAR-QITDTGLAALTSLTGLTHLDLFGARI 384
L+S++L + ISD +L + S+ SLNLD+ ++TD ++ +++LT L L+L G
Sbjct: 1206 LKSLDLGLSRISDSTLYCICLSRSITSLNLDSSWKLTD--ISHISNLTALEELNLGGCYY 1263
Query: 385 TDSGAAYLRNFKNLR--SLEICGGGLTDAGL-----TGLVSLNVSNSRITSAG-LRHLKP 436
SG L LR +LE D G LV+LN+ +T A L ++K
Sbjct: 1264 ITSGWEALSELPRLRVLNLEFTRATTRDGGYYISRCKYLVTLNLELCDMTDASCLANIKT 1323
Query: 437 LKNLR 441
L+ L
Sbjct: 1324 LEELH 1328
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 13/202 (6%)
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD-SGIAYLKGLQKLTL 208
++ L LE LN+ C IT S + LS L L+ L + ++ T G Y+ + L
Sbjct: 1246 HISNLTALEELNLGGCYYIT-SGWEALSELPRLRVLNLEFTRATTRDGGYYISRCKYLVT 1304
Query: 209 LNLEGCPVT-AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
LNLE C +T A+CL ++ L L ++ C G + L++LNL + ITDE
Sbjct: 1305 LNLELCDMTDASCLANIKTLEEL---HIGGCDELTQGFSALFTLPQLRILNLICSLITDE 1361
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL---SDTQVGSSGLRHLSGLT 324
L ++ +E LNL C + + L + ++K L L D + + G R L L
Sbjct: 1362 DLREIQPPHTIEELNLSYC-VELNDITPLGRIKSIKKLHLRQRHDVRRPTEGFRSLLELP 1420
Query: 325 NLESINL-SFTGISDGS--LRK 343
L ++L + G SD S LRK
Sbjct: 1421 CLSWVDLDNVYGWSDVSCELRK 1442
>gi|290997297|ref|XP_002681218.1| leucine-rich repeat ribonuclease inhibitor family protein
[Naegleria gruberi]
gi|284094841|gb|EFC48474.1| leucine-rich repeat ribonuclease inhibitor family protein
[Naegleria gruberi]
Length = 342
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 108/217 (49%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
++ + L SL I +++ D G Y+ +++LT LN+ + +S + L L++
Sbjct: 124 VTEMKQLTSLNIRGNRIGDEGAKYISEMKQLTSLNIRENEIGDEGAKFISEMKQLTSLDI 183
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
++ D+G + S++ L LN+ + I E + + L LN+ IG EG
Sbjct: 184 RGNRIGDEGAKYISEMKQLTSLNIYYTLIGIEGAKFISEMKQLTLLNIYYNLIGIEGAKF 243
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
++ + L L++S+ ++G G + +S + L S+N+++ I D + ++ + L SLN+
Sbjct: 244 ISEMKQLTLLDISNNEIGIEGAKFISEMKQLTSLNINYNEIGDRGAKFISEMKQLTSLNI 303
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
D G ++ + LT LD+ RI D GA Y+
Sbjct: 304 SYNITGDRGAKFISEMKQLTSLDISNNRICDEGAKYI 340
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 6/217 (2%)
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
++ + L LN+ ++ D+G + S++ L LN+ NEI DE + + L SL++
Sbjct: 124 VTEMKQLTSLNIRGNRIGDEGAKYISEMKQLTSLNIRENEIGDEGAKFISEMKQLTSLDI 183
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
IGDEG ++ + L L + T +G G + +S + L +N+ + I +
Sbjct: 184 RGNRIGDEGAKYISEMKQLTSLNIYYTLIGIEGAKFISEMKQLTLLNIYYNLIGIEGAKF 243
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
++ + L L++ +I G ++ + LT L++ I D GA ++ K L SL I
Sbjct: 244 ISEMKQLTLLDISNNEIGIEGAKFISEMKQLTSLNINYNEIGDRGAKFISEMKQLTSLNI 303
Query: 404 CGGGLTDAG------LTGLVSLNVSNSRITSAGLRHL 434
D G + L SL++SN+RI G +++
Sbjct: 304 SYNITGDRGAKFISEMKQLTSLDISNNRICDEGAKYI 340
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 26/228 (11%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
+I D G +++ + LTSL+ R N I +G K + + L LD I G
Sbjct: 139 RIGDEGAKYISEMKQLTSLNIRE-NEIGDEGAKFISEMKQLTSLD------IRG------ 185
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
N I D K +S + L SL I + + G ++ +++LTLLN+
Sbjct: 186 -------------NRIGDEGAKYISEMKQLTSLNIYYTLIGIEGAKFISEMKQLTLLNIY 232
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
+ +S + L L+++ ++ +G + S++ L LN+ +NEI D +
Sbjct: 233 YNLIGIEGAKFISEMKQLTLLDISNNEIGIEGAKFISEMKQLTSLNINYNEIGDRGAKFI 292
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
+ L SLN+ GD G ++ + L L++S+ ++ G +++
Sbjct: 293 SEMKQLTSLNISYNITGDRGAKFISEMKQLTSLDISNNRICDEGAKYI 340
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
+T + L L + ++G G +++S + L S+N+ I D + ++ + L SL++
Sbjct: 124 VTEMKQLTSLNIRGNRIGDEGAKYISEMKQLTSLNIRENEIGDEGAKFISEMKQLTSLDI 183
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI------CGGGLT 409
+I D G ++ + LT L+++ I GA ++ K L L I G
Sbjct: 184 RGNRIGDEGAKYISEMKQLTSLNIYYTLIGIEGAKFISEMKQLTLLNIYYNLIGIEGAKF 243
Query: 410 DAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
+ + L L++SN+ I G + + +K L SL +
Sbjct: 244 ISEMKQLTLLDISNNEIGIEGAKFISEMKQLTSLNI 279
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L S+D+ G+ + D G ++ + L SL+ + + I G + + + LT L+
Sbjct: 173 SEMKQLTSLDIRGNRIGDEGAKYISEMKQLTSLNIYYTL-IGIEGAKFISEMKQLTLLNI 231
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
N I +G K + + L LD+ G + + +L SLNI + N I D
Sbjct: 232 YY-NLIGIEGAKFISEMKQLTLLDISNNEIGIEGAKFISEMKQLTSLNINY-NEIGDRGA 289
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
K +S + L SL IS + D G ++ +++LT L++
Sbjct: 290 KFISEMKQLTSLNISYNITGDRGAKFISEMKQLTSLDI 327
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 95/239 (39%), Gaps = 51/239 (21%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L S+++ +++ D G + + L SLD +I D G +++ + LTSL+
Sbjct: 149 SEMKQLTSLNIRENEIGDEGAKFISEMKQLTSLDIR-GNRIGDEGAKYISEMKQLTSLN- 206
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
I+ L+ ++G
Sbjct: 207 ------------------------------IYYTLIGIEG-------------------A 217
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K +S + L L I + + G ++ +++LTLL++ + +S + L L
Sbjct: 218 KFISEMKQLTLLNIYYNLIGIEGAKFISEMKQLTLLDISNNEIGIEGAKFISEMKQLTSL 277
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
N+N ++ D G + S++ L LN+ +N D + + L SL++ + I DEG
Sbjct: 278 NINYNEIGDRGAKFISEMKQLTSLNISYNITGDRGAKFISEMKQLTSLDISNNRICDEG 336
>gi|421610748|ref|ZP_16051914.1| leucine-rich repeat domain protein [Rhodopirellula baltica SH28]
gi|408498532|gb|EKK03025.1| leucine-rich repeat domain protein [Rhodopirellula baltica SH28]
Length = 341
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 2/242 (0%)
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
D +K LS + + L + + +D + L L L L + G A S+S L +
Sbjct: 83 DGAVKLLSNTSTVSELFMPAAAWSDGTVLRLAALPNLKRLRVYGKAFDDAKAKSISGLPA 142
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L + ++DDG +++ L+ ++L + +TD+ L + L L LNL I
Sbjct: 143 LVAVTFQDTSVTDDGASVLAELNELQDVSLMNSPVTDKTLASISTLPKLTKLNLRGTKIT 202
Query: 290 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 349
E ++ L L+ LEL++T G G+ ++ + LE INL T I + SL+ G +S
Sbjct: 203 GEAFEPISKLP-LESLELAETDFGPEGMPAIANIEGLEKINLWLTKIDNESLKAFEGKTS 261
Query: 350 LKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL 408
L LN+D IT+ + + SL L L L ++ L+ + L +L + GL
Sbjct: 262 LTVLNVDNCPAITEEAIPVIVSLPHLKLLHLGKTSVSPDALPQLKPLQELETLFVTNLGL 321
Query: 409 TD 410
+
Sbjct: 322 EE 323
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 25/226 (11%)
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
G ++ L L L+ L + + D+ K +SGL L ++ + VTD G + L L +
Sbjct: 108 GTVLRLAALPNLKRLRV-YGKAFDDAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNE 166
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK--------------- 250
L ++L PVT L S+S L L LNL +++ + E SK
Sbjct: 167 LQDVSLMNSPVTDKTLASISTLPKLTKLNLRGTKITGEAFEPISKLPLESLELAETDFGP 226
Query: 251 --------IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCN 301
I L+ +NL +I +E L +G T+L LN+D+C I +E + + L +
Sbjct: 227 EGMPAIANIEGLEKINLWLTKIDNESLKAFEGKTSLTVLNVDNCPAITEEAIPVIVSLPH 286
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
LK L L T V L L L LE++ ++ G+ + ++L +
Sbjct: 287 LKLLHLGKTSVSPDALPQLKPLQELETLFVTNLGLEEEPAKELEAM 332
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 116/276 (42%), Gaps = 39/276 (14%)
Query: 230 LFYLNLNRCQLSD-DGCEKF-SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
+ ++L SD DG K S ++ L + +D ++ L L NL+ L +
Sbjct: 69 VVVVDLREVAESDLDGAVKLLSNTSTVSELFMPAAAWSDGTVLRLAALPNLKRLRVYGKA 128
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
D +++GL L + DT V G L+ L L+ ++L + ++D +L ++ L
Sbjct: 129 FDDAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNELQDVSLMNSPVTDKTLASISTL 188
Query: 348 SSLKSLNLDARQIT-----------------------DTGLAALTSLTGLTHLDLFGARI 384
L LNL +IT G+ A+ ++ GL ++L+ +I
Sbjct: 189 PKLTKLNLRGTKITGEAFEPISKLPLESLELAETDFGPEGMPAIANIEGLEKINLWLTKI 248
Query: 385 TDSGAAYLRNFKNLRSLEICG----GGLTDAGLTGLVS------LNVSNSRITSAGLRHL 434
+ L+ F+ SL + +T+ + +VS L++ + ++ L L
Sbjct: 249 DNES---LKAFEGKTSLTVLNVDNCPAITEEAIPVIVSLPHLKLLHLGKTSVSPDALPQL 305
Query: 435 KPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFR 470
KPL+ L +L + + + K L++ PNL F
Sbjct: 306 KPLQELETLFVTNLGLEEEPAKELEAM-FPNLKRFE 340
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L V L S VTD L + L L+ +I+ E + L L SL +
Sbjct: 167 LQDVSLMNSPVTDKTLASISTLPKLTKLNLR-GTKITGEAFEPISKLP-LESLELAETD- 223
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
+GM A A + L K++L + L +G L LN+ C IT+ + +
Sbjct: 224 FGPEGMPAIANIEGLEKINLWLTKIDNESLKAFEGKTSLTVLNVDNCPAITEEAIPVIVS 283
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
L +LK L + + V+ + LK LQ+L L
Sbjct: 284 LPHLKLLHLGKTSVSPDALPQLKPLQELETL 314
>gi|290973418|ref|XP_002669445.1| predicted protein [Naegleria gruberi]
gi|284082993|gb|EFC36701.1| predicted protein [Naegleria gruberi]
Length = 280
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 1/244 (0%)
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
LNI N I D +S + L L I ++++D G + +++LT L++ G +
Sbjct: 31 LNI-GTNEIGDEGAIMISEMKQLTFLDIGGNQISDEGARSISKMRQLTFLDIYGNGIGDK 89
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
S+S + L LN+ Q+ D+G + S++ L L++ NEI E + + L
Sbjct: 90 GAKSISEMQQLTLLNIGGNQIGDEGAKLISQMKQLTFLDIYCNEIDVEGAKCISEMQQLT 149
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
SLN+ S IG EG+ L+ + L L + + +G G + +S + L +++ I
Sbjct: 150 SLNIGSNEIGVEGVKFLSEMQQLTSLNIGENLIGDEGAKLISQMKQLTFLDIYCNEIGVE 209
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
+ ++ + L SLN+ I D G ++ + LT LD++ I GA Y+ K L
Sbjct: 210 GAKSISEMQQLTSLNIGENGIGDEGAKLISEMKQLTFLDIYCNEIGVEGAKYISEMKQLT 269
Query: 400 SLEI 403
SL I
Sbjct: 270 SLNI 273
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 253 SLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQV 312
L +L++G+N+I E + + L LN+ + IGDEG + ++ + L L++ Q+
Sbjct: 3 QLTLLDIGYNQIGVEGAKLISEMKQLTLLNIGTNEIGDEGAIMISEMKQLTFLDIGGNQI 62
Query: 313 GSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT 372
G R +S + L +++ GI D + ++ + L LN+ QI D G ++ +
Sbjct: 63 SDEGARSISKMRQLTFLDIYGNGIGDKGAKSISEMQQLTLLNIGGNQIGDEGAKLISQMK 122
Query: 373 GLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG---------LVSLNVSN 423
LT LD++ I GA + + L SL I G + G+ G L SLN+
Sbjct: 123 QLTFLDIYCNEIDVEGAKCISEMQQLTSLNI---GSNEIGVEGVKFLSEMQQLTSLNIGE 179
Query: 424 SRITSAGLRHLKPLKNLRSLTL 445
+ I G + + +K L L +
Sbjct: 180 NLIGDEGAKLISQMKQLTFLDI 201
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 111/240 (46%), Gaps = 5/240 (2%)
Query: 51 VIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTS 110
++ S+ L +D+ G+ ++D G + L LD + I D G + + + LT
Sbjct: 44 IMISEMKQLTFLDIGGNQISDEGARSISKMRQLTFLDI-YGNGIGDKGAKSISEMQQLTL 102
Query: 111 LSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIH-GGLVNLKGLMKLESLNIKWCNCIT 169
L+ N I +G K + + L LD+ C I G + + +L SLNI N I
Sbjct: 103 LNIG-GNQIGDEGAKLISQMKQLTFLDI-YCNEIDVEGAKCISEMQQLTSLNI-GSNEIG 159
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
+K LS + L SL I + + D G + +++LT L++ + S+S +
Sbjct: 160 VEGVKFLSEMQQLTSLNIGENLIGDEGAKLISQMKQLTFLDIYCNEIGVEGAKSISEMQQ 219
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L LN+ + D+G + S++ L L++ NEI E ++ + L SLN+ + IG
Sbjct: 220 LTSLNIGENGIGDEGAKLISEMKQLTFLDIYCNEIGVEGAKYISEMKQLTSLNISNNQIG 279
>gi|168700135|ref|ZP_02732412.1| hypothetical protein GobsU_11445 [Gemmata obscuriglobus UQM 2246]
Length = 120
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 74/120 (61%), Gaps = 3/120 (2%)
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
L LKGLT L +L + D G+ L+GL L LEL+ TQV +G++ LSGLT L +
Sbjct: 4 LAALKGLTQL---DLFDTKVTDVGVKELSGLKGLTRLELTFTQVTDAGVKALSGLTALTT 60
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG 388
++L FT ++D ++ L+GL L LNL +TD G+ AL L GLT LDL R+TD+G
Sbjct: 61 LDLGFTKVTDAGVKALSGLKHLIQLNLGVTVVTDAGVKALAGLKGLTILDLSFTRVTDAG 120
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
L LKGL +L+ + K +TD +K LSGL L L+++ ++VTD+G+ L GL LT
Sbjct: 4 LAALKGLTQLDLFDTK----VTDVGVKELSGLKGLTRLELTFTQVTDAGVKALSGLTALT 59
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
L+L VT A + +LS L L LNL ++D G + + + L +L+L F +TD
Sbjct: 60 TLDLGFTKVTDAGVKALSGLKHLIQLNLGVTVVTDAGVKALAGLKGLTILDLSFTRVTD 118
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 69/118 (58%)
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
L L L L+L DT+V G++ LSGL L + L+FT ++D ++ L+GL++L +L+
Sbjct: 3 ELAALKGLTQLDLFDTKVTDVGVKELSGLKGLTRLELTFTQVTDAGVKALSGLTALTTLD 62
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
L ++TD G+ AL+ L L L+L +TD+G L K L L++ +TDAG
Sbjct: 63 LGFTKVTDAGVKALSGLKHLIQLNLGVTVVTDAGVKALAGLKGLTILDLSFTRVTDAG 120
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 69/120 (57%), Gaps = 6/120 (5%)
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
++ L+ L L ++L T ++D +++L+GL L L L Q+TD G+ AL+ LT LT
Sbjct: 1 MKELAALKGLTQLDLFDTKVTDVGVKELSGLKGLTRLELTFTQVTDAGVKALSGLTALTT 60
Query: 377 LDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAG 430
LDL ++TD+G L K+L L + +TD AGL GL L++S +R+T AG
Sbjct: 61 LDLGFTKVTDAGVKALSGLKHLIQLNLGVTVVTDAGVKALAGLKGLTILDLSFTRVTDAG 120
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
MK A L L +LDL G+ L GL L L + + +TD+ +K LSGLT L
Sbjct: 1 MKELAALKGLTQLDLFDTKVTDVGVKELSGLKGLTRLELTFTQ-VTDAGVKALSGLTALT 59
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
+L + +KVTD+G+ L GL+ L LNL VT A + +L+ L L L+L+ +++D
Sbjct: 60 TLDLGFTKVTDAGVKALSGLKHLIQLNLGVTVVTDAGVKALAGLKGLTILDLSFTRVTDA 119
Query: 244 G 244
G
Sbjct: 120 G 120
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 68/118 (57%)
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
+ L+AL L L+L +++D G ++ S + L L L F ++TD + L GLT L +
Sbjct: 1 MKELAALKGLTQLDLFDTKVTDVGVKELSGLKGLTRLELTFTQVTDAGVKALSGLTALTT 60
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
L+L + D G+ L+GL +L L L T V +G++ L+GL L ++LSFT ++D
Sbjct: 61 LDLGFTKVTDAGVKALSGLKHLIQLNLGVTVVTDAGVKALAGLKGLTILDLSFTRVTD 118
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 63/120 (52%)
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
MK L+ L L L + +KVTD G+ L GL+ LT L L VT A + +LS L +L
Sbjct: 1 MKELAALKGLTQLDLFDTKVTDVGVKELSGLKGLTRLELTFTQVTDAGVKALSGLTALTT 60
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L+L +++D G + S + L LNLG +TD + L GL L L+L + D G
Sbjct: 61 LDLGFTKVTDAGVKALSGLKHLIQLNLGVTVVTDAGVKALAGLKGLTILDLSFTRVTDAG 120
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 66/120 (55%)
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
++ + + L L+L ++TD + L GL L L L + D G+ L+GL L
Sbjct: 1 MKELAALKGLTQLDLFDTKVTDVGVKELSGLKGLTRLELTFTQVTDAGVKALSGLTALTT 60
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 364
L+L T+V +G++ LSGL +L +NL T ++D ++ LAGL L L+L ++TD G
Sbjct: 61 LDLGFTKVTDAGVKALSGLKHLIQLNLGVTVVTDAGVKALAGLKGLTILDLSFTRVTDAG 120
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 76 HLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
L L LD F +++D G++ L GL LT L +T G+KA +GL L
Sbjct: 3 ELAALKGLTQLDL-FDTKVTDVGVKELSGLKGLTRLELTFTQ-VTDAGVKALSGLTALTT 60
Query: 136 LDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDS 195
LDL G+ L GL L LN+ +TD+ +K L+GL L L +S ++VTD+
Sbjct: 61 LDLGFTKVTDAGVKALSGLKHLIQLNL-GVTVVTDAGVKALAGLKGLTILDLSFTRVTDA 119
Query: 196 G 196
G
Sbjct: 120 G 120
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 368 LTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNV 421
L +L GLT LDLF ++TD G L K L LE+ +TDAG LT L +L++
Sbjct: 4 LAALKGLTQLDLFDTKVTDVGVKELSGLKGLTRLELTFTQVTDAGVKALSGLTALTTLDL 63
Query: 422 SNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
+++T AG++ L LK+L L L VT +K L
Sbjct: 64 GFTKVTDAGVKALSGLKHLIQLNLGVTVVTDAGVKAL 100
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L ++L+ + VTD+G+ L + L +LD F +++D G++ L GL +L L+
Sbjct: 34 LTRLELTFTQVTDAGVKALSGLTALTTLDLGFT-KVTDAGVKALSGLKHLIQLNLGV-TV 91
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRI 144
+T G+KA AGL L LDL TR+
Sbjct: 92 VTDAGVKALAGLKGLTILDLS-FTRV 116
>gi|406831652|ref|ZP_11091246.1| hypothetical protein SpalD1_08439 [Schlesneria paludicola DSM
18645]
Length = 267
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 87/154 (56%)
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG 274
P+ A L + L L L L Q++D EK + +L L LG+++++D + HLKG
Sbjct: 92 PLPAELLSEIGTLKELKTLWLLGPQVTDVAVEKLVGMKNLTGLYLGYSQLSDRGIEHLKG 151
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
L+ LE + L +GD+ L GL NLK + L+DT V +G++ L L +L+ + L+ T
Sbjct: 152 LSGLEWIFLIQTQVGDKTCDILQGLPNLKSIALNDTNVTDAGVKKLKALGDLQYLGLAGT 211
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
+SD L+ L + +LK L++ I+D G AA+
Sbjct: 212 DVSDDGLKYLIEMKALKRLDIGNTLISDEGQAAI 245
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Query: 245 CEKFSKIGSLKVLNLGF---NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
E S+IG+LK L + ++TD + L G+ NL L L + D G+ +L GL
Sbjct: 95 AELLSEIGTLKELKTLWLLGPQVTDVAVEKLVGMKNLTGLYLGYSQLSDRGIEHLKGLSG 154
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
L+ + L TQVG L GL NL+SI L+ T ++D ++KL L L+ L L ++
Sbjct: 155 LEWIFLIQTQVGDKTCDILQGLPNLKSIALNDTNVTDAGVKKLKALGDLQYLGLAGTDVS 214
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
D GL L + L LD+ I+D G A +R
Sbjct: 215 DDGLKYLIEMKALKRLDIGNTLISDEGQAAIRK 247
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 76/146 (52%)
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
E L + L L++L L + D + L G+ NL L L +Q+ G+ HL GL+ L
Sbjct: 96 ELLSEIGTLKELKTLWLLGPQVTDVAVEKLVGMKNLTGLYLGYSQLSDRGIEHLKGLSGL 155
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
E I L T + D + L GL +LKS+ L+ +TD G+ L +L L +L L G ++D
Sbjct: 156 EWIFLIQTQVGDKTCDILQGLPNLKSIALNDTNVTDAGVKKLKALGDLQYLGLAGTDVSD 215
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAG 412
G YL K L+ L+I ++D G
Sbjct: 216 DGLKYLIEMKALKRLDIGNTLISDEG 241
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 20/200 (10%)
Query: 112 SFRRNNAITAQGMKAFAGLINLV---KLDLERCTRIHGGLVN--------------LKGL 154
SF+ I A+ +++ G + + + + R HGG+ + L +
Sbjct: 43 SFQDERRIAAK-IESLGGRVEFRFTGPMWVPKSIRSHGGVTSISLTTTDRPLPAELLSEI 101
Query: 155 MKLESLNIKWC--NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
L+ L W +TD ++ L G+ NL L + S+++D GI +LKGL L + L
Sbjct: 102 GTLKELKTLWLLGPQVTDVAVEKLVGMKNLTGLYLGYSQLSDRGIEHLKGLSGLEWIFLI 161
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
V D L L +L + LN ++D G +K +G L+ L L +++D+ L +L
Sbjct: 162 QTQVGDKTCDILQGLPNLKSIALNDTNVTDAGVKKLKALGDLQYLGLAGTDVSDDGLKYL 221
Query: 273 KGLTNLESLNLDSCGIGDEG 292
+ L+ L++ + I DEG
Sbjct: 222 IEMKALKRLDIGNTLISDEG 241
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 195 SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSL 254
S I LK L+ L LL G VT ++ L + +L L L QLSD G E + L
Sbjct: 99 SEIGTLKELKTLWLL---GPQVTDVAVEKLVGMKNLTGLYLGYSQLSDRGIEHLKGLSGL 155
Query: 255 KVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS 314
+ + L ++ D+ L+GL NL+S+ L+ + D G+ L L +L+ L L+ T V
Sbjct: 156 EWIFLIQTQVGDKTCDILQGLPNLKSIALNDTNVTDAGVKKLKALGDLQYLGLAGTDVSD 215
Query: 315 SGLRHLSGLTNLESINLSFTGISD 338
GL++L + L+ +++ T ISD
Sbjct: 216 DGLKYLIEMKALKRLDIGNTLISD 239
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
L LK+L + +VTD + L G++ LT L L ++ ++ L L L ++ L +
Sbjct: 104 LKELKTLWLLGPQVTDVAVEKLVGMKNLTGLYLGYSQLSDRGIEHLKGLSGLEWIFLIQT 163
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
Q+ D C+ + +LK + L +TD + LK L +L+ L L + D+GL L
Sbjct: 164 QVGDKTCDILQGLPNLKSIALNDTNVTDAGVKKLKALGDLQYLGLAGTDVSDDGLKYLIE 223
Query: 299 LCNLKCLELSDTQVGSSG 316
+ LK L++ +T + G
Sbjct: 224 MKALKRLDIGNTLISDEG 241
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
L G VTD + L NL L + Q+SD G+EHL+GLS L + F + +
Sbjct: 112 LLGPQVTDVAVEKLVGMKNLTGLYLGYS-QLSDRGIEHLKGLSGLEWI-FLIQTQVGDKT 169
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
GL NL + L G+ LK L L+ L + + ++D +K L + LK
Sbjct: 170 CDILQGLPNLKSIALNDTNVTDAGVKKLKALGDLQYLGLAGTD-VSDDGLKYLIEMKALK 228
Query: 184 SLQISCSKVTDSGIAYLK 201
L I + ++D G A ++
Sbjct: 229 RLDIGNTLISDEGQAAIR 246
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 329 INLSFTG--ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
+ FTG S+R G++S+ SL R + L+ + +L L L L G ++TD
Sbjct: 61 VEFRFTGPMWVPKSIRSHGGVTSI-SLTTTDRPLPAELLSEIGTLKELKTLWLLGPQVTD 119
Query: 387 SGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNL 440
L KNL L + L+D GL+GL + + +++ L+ L NL
Sbjct: 120 VAVEKLVGMKNLTGLYLGYSQLSDRGIEHLKGLSGLEWIFLIQTQVGDKTCDILQGLPNL 179
Query: 441 RSLTLESCKVTANDIKRLQS 460
+S+ L VT +K+L++
Sbjct: 180 KSIALNDTNVTDAGVKKLKA 199
>gi|343413823|emb|CCD21194.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 707
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 193/379 (50%), Gaps = 39/379 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
L + S+L++LD + C I+D + L LS+L +L IT + + L +L L
Sbjct: 177 LSELSSLRTLDLSHCTGITD--VSPLSKLSSLRTLDLSHCTGIT--DVSPLSKLSSLRTL 232
Query: 137 DLERCTRIHGGLVNLKGLMKLESL-NIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTD 194
DL CT G+ ++ L KL SL + +C +D+ PLS L++L++L +S C+ +TD
Sbjct: 233 DLSHCT----GITDVSPLSKLSSLRTLDLSHCTGITDVSPLSELSSLRTLGLSHCTGITD 288
Query: 195 SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSL 254
++ L L L L+L C + LS L SL L+L+ C D SK+ SL
Sbjct: 289 --VSPLSELSSLRTLDLSHC-TGITDVSPLSELSSLRTLDLSHCTGITD-VSPLSKLSSL 344
Query: 255 KVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQV 312
+ L + ITD + L L++L +L C GI D + L+ L L+ L LS
Sbjct: 345 RTLYFLYCTGITD--VSPLSELSSLRTLYFSHCTGITD--VSPLSELSGLRMLYLSHCT- 399
Query: 313 GSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTS 370
G + + LS ++L ++ S TGI+D S L+ LSSL++L+L ITD ++ L+
Sbjct: 400 GITDVSPLSVFSSLRMLDFSHCTGITDVS--PLSKLSSLRTLDLSHCTGITD--VSPLSE 455
Query: 371 LTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEICG-GGLTDAG----LTGLVSLNVSNS 424
L+ L LDL ITD + L +LR+L++ G+TD L+ L +L++S+
Sbjct: 456 LSSLHTLDLSHCTGITD--VSPLSELSSLRTLDLSHCTGITDVSPLSELSSLCTLDLSH- 512
Query: 425 RITSAGLRHLKPLKNLRSL 443
G+ + PL L SL
Sbjct: 513 ---CTGITDVSPLSELSSL 528
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 94/185 (50%), Gaps = 15/185 (8%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNF 90
+L+ L L G+ D S+ SSL ++DLS + +TD + L + S+L++LD +
Sbjct: 481 SLRTLDLSHCTGITDVSP---LSELSSLCTLDLSHCTGITD--VSPLSELSSLRTLDLSH 535
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN 150
C I+D + L S+L +L IT + + L +L L+L CT I +
Sbjct: 536 CTGITD--VSPLSEFSSLHTLDLSHCTGIT--DVSPLSELSSLRMLNLSHCTGI-TDVSP 590
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTD-SGIAYLKGLQKLTL 208
L L +L++ C IT D+ PLS L++L L +S C+ +TD S + + G +KL L
Sbjct: 591 LSEFSSLHTLDLSHCTGIT--DVSPLSKLSSLHILGLSHCTGITDVSPLTTIIGFEKLYL 648
Query: 209 LNLEG 213
N G
Sbjct: 649 SNCTG 653
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 54 SQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLS 112
S+ SSL ++DLS + +TD + L + S+L +LD + C I+D + L LS+L L+
Sbjct: 523 SELSSLRTLDLSHCTGITD--VSPLSEFSSLHTLDLSHCTGITD--VSPLSELSSLRMLN 578
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI-KWCNCITDS 171
IT + + +L LDL CT G+ ++ L KL SL+I +C +
Sbjct: 579 LSHCTGIT--DVSPLSEFSSLHTLDLSHCT----GITDVSPLSKLSSLHILGLSHCTGIT 632
Query: 172 DMKPLSGLTNLKSLQIS-CSKVTD 194
D+ PL+ + + L +S C+ +TD
Sbjct: 633 DVSPLTTIIGFEKLYLSNCTGITD 656
>gi|320165520|gb|EFW42419.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 694
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 123/269 (45%), Gaps = 6/269 (2%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N IT + LT L L ++ +++TD GL LT+L L G +T + +
Sbjct: 77 NQITSIPASAFANLTALTELDLTVNQITDISANAFAGLAALTMLFLPGNNITGIPANVFA 136
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
L +L LNL+ QL+ + F+ + +L+ LNL N+IT L L+SL L
Sbjct: 137 GLTALLVLNLSGNQLASIPADAFTGLTALQTLNLQSNQITSISAAGFADLAALKSLGLSG 196
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
+G T L ++LS+ Q+ S +GL L ++ LS I+ +
Sbjct: 197 NRLGSNLANAFTNQSALGFIDLSNNQITSLLADAFTGLAALNTLFLSNNNITSIPANAVT 256
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
GL++LK L++ Q T ++ LT LT+L L + T A L SL++
Sbjct: 257 GLTALKYLDVSGNQFTSFPASSFAGLTALTYLSLSNNQATSISAWAFTGLTALTSLQLSN 316
Query: 406 GGLTD------AGLTGLVSLNVSNSRITS 428
TD AGL L+ L ++ +++TS
Sbjct: 317 NQFTDISANAFAGLPALMELGLAGNQLTS 345
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 150/351 (42%), Gaps = 12/351 (3%)
Query: 109 TSLSFRRNNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVNLKGLMKLESLNIKWCN 166
TSLS N IT+ AFA L L +LDL + T I GL L L + N
Sbjct: 70 TSLSLSINQ-ITSIPASAFANLTALTELDLTVNQITDISANA--FAGLAALTMLFLPGNN 126
Query: 167 CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA 226
IT +GLT L L +S +++ GL L LNL+ +T+ +
Sbjct: 127 -ITGIPANVFAGLTALLVLNLSGNQLASIPADAFTGLTALQTLNLQSNQITSISAAGFAD 185
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC 286
L +L L L+ +L + F+ +L ++L N+IT GL L +L L +
Sbjct: 186 LAALKSLGLSGNRLGSNLANAFTNQSALGFIDLSNNQITSLLADAFTGLAALNTLFLSNN 245
Query: 287 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAG 346
I +TGL LK L++S Q S +GLT L ++LS + S G
Sbjct: 246 NITSIPANAVTGLTALKYLDVSGNQFTSFPASSFAGLTALTYLSLSNNQATSISAWAFTG 305
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG 406
L++L SL L Q TD A L L L L G ++T + L + L L +
Sbjct: 306 LTALTSLQLSNNQFTDISANAFAGLPALMELGLAGNQLTSIPTSALLDLTLLNFLSLSAN 365
Query: 407 GLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
+T GLT L SL +S +++TS L L L+L++ T
Sbjct: 366 QITSIPASAFTGLTALFSLILSRNQLTSIPAAAFSGLTLLNILSLDTNPFT 416
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 122/317 (38%), Gaps = 50/317 (15%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
QI+D GL+ LT L F N IT FAGL L+ L+L
Sbjct: 102 QITDISANAFAGLAALTML-FLPGNNITGIPANVFAGLTALLVLNLSGNQLASIPADAFT 160
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKV---------TDSGIAYL--- 200
GL L++LN++ N IT + L LKSL +S +++ S + ++
Sbjct: 161 GLTALQTLNLQ-SNQITSISAAGFADLAALKSLGLSGNRLGSNLANAFTNQSALGFIDLS 219
Query: 201 ------------KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
GL L L L +T+ ++++ L +L YL+++ Q + F
Sbjct: 220 NNQITSLLADAFTGLAALNTLFLSNNNITSIPANAVTGLTALKYLDVSGNQFTSFPASSF 279
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL--- 305
+ + +L L+L N+ T GLT L SL L + D GL L L
Sbjct: 280 AGLTALTYLSLSNNQATSISAWAFTGLTALTSLQLSNNQFTDISANAFAGLPALMELGLA 339
Query: 306 ---------------------ELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
LS Q+ S +GLT L S+ LS ++
Sbjct: 340 GNQLTSIPTSALLDLTLLNFLSLSANQITSIPASAFTGLTALFSLILSRNQLTSIPAAAF 399
Query: 345 AGLSSLKSLNLDARQIT 361
+GL+ L L+LD T
Sbjct: 400 SGLTLLNILSLDTNPFT 416
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 91/229 (39%), Gaps = 33/229 (14%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
QI+ + GL+ L +L F NN IT+ A GL L LD+ +
Sbjct: 222 QITSLLADAFTGLAALNTL-FLSNNNITSIPANAVTGLTALKYLDVSGNQFTSFPASSFA 280
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
GL L L++ N T +GLT L SLQ+S ++ TD GL L L L
Sbjct: 281 GLTALTYLSLSN-NQATSISAWAFTGLTALTSLQLSNNQFTDISANAFAGLPALMELGLA 339
Query: 213 G-----CP-------------------VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
G P +T+ + + L +LF L L+R QL+ F
Sbjct: 340 GNQLTSIPTSALLDLTLLNFLSLSANQITSIPASAFTGLTALFSLILSRNQLTSIPAAAF 399
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTN-------LESLNLDSCGIGD 290
S + L +L+L N T +GL N ESL+ ++ G+
Sbjct: 400 SGLTLLNILSLDTNPFTTLPPGLFQGLPNDIDLSLYYESLSPNNFSFGE 448
>gi|291230586|ref|XP_002735244.1| PREDICTED: partner of paired-like [Saccoglossus kowalevskii]
Length = 396
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 155/298 (52%), Gaps = 24/298 (8%)
Query: 82 NLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLI-NLVKLDL 138
NLQSL+ + C ++D GL H +R + +LT L+ IT + A + NL LDL
Sbjct: 93 NLQSLNLSGCYNLTDVGLAHAFVREMPSLTVLNLSLCKQITDSSLGRIAQYLRNLEHLDL 152
Query: 139 ERCTRI--HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LKSLQIS 188
C I G L+ GL KL LN++ C ++DS + L+GLT L+ L +
Sbjct: 153 GGCCNITNTGLLLIAWGLTKLRYLNLRSCRHVSDSGIAHLAGLTKNDAGGTLFLQHLVLQ 212
Query: 189 -CSKVTDSGIA-YLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDDG 244
C K+TD + +GL KL LNL C +T + + LS + SL LNL C +SD G
Sbjct: 213 DCQKLTDLALLNAARGLVKLESLNLSFCGGITDSGMVHLSRMPSLKELNLRSCDNISDIG 272
Query: 245 CEKFSKIGS-LKVLNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGLVNLT-GLC 300
++ G+ L+ L++ F +++ D L H+ +G+ +L S++L SC I D+G+ L L
Sbjct: 273 IAHLAEGGAYLRTLDVSFCDKVGDASLTHIAQGMYSLMSISLSSCPITDDGMARLVRTLR 332
Query: 301 NLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNL 355
+LK L + +++ GL ++ L L I+L T I+ L K+ L L LNL
Sbjct: 333 DLKTLNIGQCSRITDEGLGLIATNLRKLSCIDLYGCTKITTVGLEKIMQLPCLSVLNL 390
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 145/277 (52%), Gaps = 34/277 (12%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGS-DVTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEH 101
+ D + IA +L +DL G ++T++GL+ + + L+ L+ C +SD G+ H
Sbjct: 132 ITDSSLGRIAQYLRNLEHLDLGGCCNITNTGLLLIAWGLTKLRYLNLRSCRHVSDSGIAH 191
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLES 159
L GL+ +N+A G + L L L+ C ++ L+N +GL+KLES
Sbjct: 192 LAGLT--------KNDA---------GGTLFLQHLVLQDCQKLTDLALLNAARGLVKLES 234
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGC-PV 216
LN+ +C ITDS M LS + +LK L + SC ++D GIA+L +G L L++ C V
Sbjct: 235 LNLSFCGGITDSGMVHLSRMPSLKELNLRSCDNISDIGIAHLAEGGAYLRTLDVSFCDKV 294
Query: 217 TAACLDSLS-ALGSLFYLNLNRCQLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHLK 273
A L ++ + SL ++L+ C ++DDG + + + LK LN+G + ITDE L
Sbjct: 295 GDASLTHIAQGMYSLMSISLSSCPITDDGMARLVRTLRDLKTLNIGQCSRITDEGL---- 350
Query: 274 GL--TNLESLN-LDSCGIGDEGLVNLTGLCNLKCLEL 307
GL TNL L+ +D G V L + L CL +
Sbjct: 351 GLIATNLRKLSCIDLYGCTKITTVGLEKIMQLPCLSV 387
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 95/190 (50%), Gaps = 25/190 (13%)
Query: 272 LKGLTNLESLNLDSC-GIGDEGLVN--------LTGLCNLKCLELSDTQVGSSGLRHLSG 322
++G+ NL+SLNL C + D GL + LT L C +++D+ +G R
Sbjct: 88 VQGMHNLQSLNLSGCYNLTDVGLAHAFVREMPSLTVLNLSLCKQITDSSLG----RIAQY 143
Query: 323 LTNLESINLS-FTGISDGSLRKLA-GLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL 379
L NLE ++L I++ L +A GL+ L+ LNL + R ++D+G+A L GLT D
Sbjct: 144 LRNLEHLDLGGCCNITNTGLLLIAWGLTKLRYLNLRSCRHVSDSGIA---HLAGLTKNDA 200
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN-SRITSAGLRHLKPLK 438
G L++ + L L + GL L SLN+S IT +G+ HL +
Sbjct: 201 GGTLFLQH--LVLQDCQKLTDLALLNAA---RGLVKLESLNLSFCGGITDSGMVHLSRMP 255
Query: 439 NLRSLTLESC 448
+L+ L L SC
Sbjct: 256 SLKELNLRSC 265
>gi|32477277|ref|NP_870271.1| G protein-coupled receptor LGR4 [Rhodopirellula baltica SH 1]
gi|32447828|emb|CAD77346.1| probable G protein-coupled receptor LGR4 [Rhodopirellula baltica SH
1]
Length = 341
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 2/242 (0%)
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
D +K LS + + L + + +D + L L L L + G A S+S L +
Sbjct: 83 DGAVKLLSNTSTVSELFMPAAAWSDGTVLRLAALPNLKRLRVYGKAFDDAKAKSISGLPA 142
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L + ++DDG +++ L+ ++L + +TD+ L + L L LNL I
Sbjct: 143 LVAVTFQDTSVTDDGASVLAELNELQDVSLMKSPVTDKTLTSISTLPKLTKLNLRGTKIT 202
Query: 290 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 349
E ++ L L+ LEL++T G G+ ++ + LE INL T I + SL+ G +S
Sbjct: 203 GEAFEPISKLP-LESLELAETDFGPEGMPAIANIEGLEKINLWLTKIDNESLKAFEGKTS 261
Query: 350 LKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL 408
L LN+D IT+ + + SL L L L ++ L+ + L +L + GL
Sbjct: 262 LTVLNVDNCPAITEEAIPVIVSLPHLKLLHLGKTSVSPDALPQLKPLQELETLFVTNLGL 321
Query: 409 TD 410
+
Sbjct: 322 EE 323
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 25/226 (11%)
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
G ++ L L L+ L + + D+ K +SGL L ++ + VTD G + L L +
Sbjct: 108 GTVLRLAALPNLKRLRV-YGKAFDDAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNE 166
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK--------------- 250
L ++L PVT L S+S L L LNL +++ + E SK
Sbjct: 167 LQDVSLMKSPVTDKTLTSISTLPKLTKLNLRGTKITGEAFEPISKLPLESLELAETDFGP 226
Query: 251 --------IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCN 301
I L+ +NL +I +E L +G T+L LN+D+C I +E + + L +
Sbjct: 227 EGMPAIANIEGLEKINLWLTKIDNESLKAFEGKTSLTVLNVDNCPAITEEAIPVIVSLPH 286
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
LK L L T V L L L LE++ ++ G+ + ++L +
Sbjct: 287 LKLLHLGKTSVSPDALPQLKPLQELETLFVTNLGLEEEPAKELEAM 332
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 116/276 (42%), Gaps = 39/276 (14%)
Query: 230 LFYLNLNRCQLSD-DGCEKF-SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
+ ++L SD DG K S ++ L + +D ++ L L NL+ L +
Sbjct: 69 VVVVDLREVAESDLDGAVKLLSNTSTVSELFMPAAAWSDGTVLRLAALPNLKRLRVYGKA 128
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
D +++GL L + DT V G L+ L L+ ++L + ++D +L ++ L
Sbjct: 129 FDDAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNELQDVSLMKSPVTDKTLTSISTL 188
Query: 348 SSLKSLNLDARQIT-----------------------DTGLAALTSLTGLTHLDLFGARI 384
L LNL +IT G+ A+ ++ GL ++L+ +I
Sbjct: 189 PKLTKLNLRGTKITGEAFEPISKLPLESLELAETDFGPEGMPAIANIEGLEKINLWLTKI 248
Query: 385 TDSGAAYLRNFKNLRSLEICG----GGLTDAGLTGLVS------LNVSNSRITSAGLRHL 434
+ L+ F+ SL + +T+ + +VS L++ + ++ L L
Sbjct: 249 DNES---LKAFEGKTSLTVLNVDNCPAITEEAIPVIVSLPHLKLLHLGKTSVSPDALPQL 305
Query: 435 KPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFR 470
KPL+ L +L + + + K L++ PNL F
Sbjct: 306 KPLQELETLFVTNLGLEEEPAKELEAM-FPNLKRFE 340
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L V L S VTD L + L L+ +I+ E + L L SL +
Sbjct: 167 LQDVSLMKSPVTDKTLTSISTLPKLTKLNLR-GTKITGEAFEPISKLP-LESLELAETD- 223
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
+GM A A + L K++L + L +G L LN+ C IT+ + +
Sbjct: 224 FGPEGMPAIANIEGLEKINLWLTKIDNESLKAFEGKTSLTVLNVDNCPAITEEAIPVIVS 283
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
L +LK L + + V+ + LK LQ+L L
Sbjct: 284 LPHLKLLHLGKTSVSPDALPQLKPLQELETL 314
>gi|290993104|ref|XP_002679173.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284092789|gb|EFC46429.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 370
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 129/272 (47%), Gaps = 6/272 (2%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+ NL+ L + ++ + + ++ LT L+L G ++ +D +S + L YL ++
Sbjct: 93 MRNLQELYLVSKELDSNDAQVISEMKSLTKLDLNGNRISDEGVDFISKMSGLTYLRIDSN 152
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
+ D+G + + L+ L + N + + + NL L++ +G EG ++
Sbjct: 153 AVHDEGAKSIQGMKGLRTLKVSNNSFFEVGFEAISQMGNLTKLDMSENSLGIEGTKSIGI 212
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
+ NL L++ +GS G+++L+ + L +++ I + + + L L L++
Sbjct: 213 MKNLTSLKIDYNHIGSEGVKYLNEMKQLTKLSIVENQIDEEGAKYIGELKQLTILDISFN 272
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLV- 417
+ + G ++++L LT LD+ I ++GA L N L L+I + G LV
Sbjct: 273 YVGEKGAKSISTLNKLTMLDIIENNIGENGAISLSNLNQLTKLDINSNNIGHLGAKSLVK 332
Query: 418 -----SLNVSNSRITSAGLRHLKPLKNLRSLT 444
LN+S + I + ++ +KNL+SLT
Sbjct: 333 LNQLKELNISYNNINDLEINIIRQMKNLKSLT 364
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 7/256 (2%)
Query: 52 IASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSL 111
+ S+ SL +DL+G+ ++D G+ + S L L + + D G + ++G+ L +L
Sbjct: 113 VISEMKSLTKLDLNGNRISDEGVDFISKMSGLTYLRID-SNAVHDEGAKSIQGMKGLRTL 171
Query: 112 SFRRNNAITAQGMKAFAGLINLVKLDL-ERCTRIHGGLVNLKGLMK-LESLNIKWCNCIT 169
NN+ G +A + + NL KLD+ E I G G+MK L SL I + N I
Sbjct: 172 KV-SNNSFFEVGFEAISQMGNLTKLDMSENSLGIEG--TKSIGIMKNLTSLKIDY-NHIG 227
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
+K L+ + L L I +++ + G Y+ L++LT+L++ V S+S L
Sbjct: 228 SEGVKYLNEMKQLTKLSIVENQIDEEGAKYIGELKQLTILDISFNYVGEKGAKSISTLNK 287
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L L++ + ++G S + L L++ N I L L L+ LN+ I
Sbjct: 288 LTMLDIIENNIGENGAISLSNLNQLTKLDINSNNIGHLGAKSLVKLNQLKELNISYNNIN 347
Query: 290 DEGLVNLTGLCNLKCL 305
D + + + NLK L
Sbjct: 348 DLEINIIRQMKNLKSL 363
>gi|255523038|ref|ZP_05390010.1| leucine-rich repeat protein [Clostridium carboxidivorans P7]
gi|255513153|gb|EET89421.1| leucine-rich repeat protein [Clostridium carboxidivorans P7]
Length = 421
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 120/236 (50%), Gaps = 41/236 (17%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
++GL+ L+SL + +C D+ PL GLTNLK L + +TD I+ LKGL L L
Sbjct: 186 IEGLVNLQSLTLTYCQI---EDISPLKGLTNLKELMLYDDNITD--ISPLKGLTNLEFLE 240
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
L G +T + SL L L ++L ++ D ++ +L+ LNL +N+ITD +
Sbjct: 241 LYGNQITD--IPSLEGLTKLKDIDLGNNKIHD--ITLLRELSNLQELNLVYNKITD--IS 294
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
LK LTNL SL+LD+ I D + L L+NL+S++
Sbjct: 295 SLKELTNLNSLDLDNNNISD--------------------------ISPLEKLSNLKSLS 328
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
L I+D S L GL++L SL LD ITD ++ L LT L L+L +I+D
Sbjct: 329 LGSNKITDIS--SLKGLTNLNSLVLDDNNITD--ISPLKGLTNLNFLNLGSNKISD 380
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 131/269 (48%), Gaps = 21/269 (7%)
Query: 79 DCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL 138
D N+ L C SD ++++ G+ L +L + + GL NL +L L
Sbjct: 160 DVENITELMEQNCGIKSDNTIKYINGIEGLVNLQSLTLTYCQIEDISPLKGLTNLKELML 219
Query: 139 --ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG 196
+ T I LKGL LE L + + N ITD + L GLT LK + + +K+ D
Sbjct: 220 YDDNITDISP----LKGLTNLEFLEL-YGNQITD--IPSLEGLTKLKDIDLGNNKIHD-- 270
Query: 197 IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 256
I L+ L L LNL +T + SL L +L L+L+ +SD K+ +LK
Sbjct: 271 ITLLRELSNLQELNLVYNKITD--ISSLKELTNLNSLDLDNNNISD--ISPLEKLSNLKS 326
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
L+LG N+ITD + LKGLTNL SL LD I D + L GL NL L L ++ S
Sbjct: 327 LSLGSNKITD--ISSLKGLTNLNSLVLDDNNITD--ISPLKGLTNLNFLNLGSNKI--SD 380
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLA 345
+ L GLTNL ++ L T ++ KL
Sbjct: 381 ISPLEGLTNLSTLWLKDTPTNEVYKEKLK 409
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 109/244 (44%), Gaps = 40/244 (16%)
Query: 246 EKFSKIGSLKVLNLGFNEITDECLVHLKGL------TNLESLNLDSCGIGDEGLVNLTGL 299
EK +I K N E +++ +V + ++ D + + N+T L
Sbjct: 108 EKNKQIKEGKTFNFKIKETSEKPIVFKDSVFERLIRNKIQVNKPDWETLNKSDVENITEL 167
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 359
C SD + + + GL NL+S+ L++ I D S L GL++LK L L
Sbjct: 168 MEQNCGIKSDNTIKY--INGIEGLVNLQSLTLTYCQIEDIS--PLKGLTNLKELMLYDDN 223
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGA--------------------AYLRNFKNLR 399
ITD ++ L LT L L+L+G +ITD + LR NL+
Sbjct: 224 ITD--ISPLKGLTNLEFLELYGNQITDIPSLEGLTKLKDIDLGNNKIHDITLLRELSNLQ 281
Query: 400 SLEICGGGLTDAG----LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 455
L + +TD LT L SL++ N+ I + + L+ L NL+SL+L S K+T DI
Sbjct: 282 ELNLVYNKITDISSLKELTNLNSLDLDNNNI--SDISPLEKLSNLKSLSLGSNKIT--DI 337
Query: 456 KRLQ 459
L+
Sbjct: 338 SSLK 341
>gi|440712554|ref|ZP_20893170.1| hypothetical protein RBSWK_00227 [Rhodopirellula baltica SWK14]
gi|436442709|gb|ELP35820.1| hypothetical protein RBSWK_00227 [Rhodopirellula baltica SWK14]
Length = 341
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 2/242 (0%)
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
D +K LS + + L + + +D + L L L L + G A S+S L +
Sbjct: 83 DGAVKLLSNTSTVSELFMPAAAWSDGTVLRLAALPNLKRLRVYGKAFDDAKAKSISGLPA 142
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L + ++DDG +++ L+ ++L + +TD+ L + L L LNL I
Sbjct: 143 LVAVTFQDTSVTDDGASVLAELNELQDVSLMNSPVTDKTLASISTLPKLTKLNLRGTKIT 202
Query: 290 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 349
E ++ L L+ LEL++T G G+ ++ + LE INL T I + SL+ G +S
Sbjct: 203 GEAFEPISKLP-LESLELAETDFGPEGMPAIANIEGLEKINLWLTKIDNESLKAFEGKTS 261
Query: 350 LKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL 408
L LN+D IT+ + + SL L L L ++ L+ + L +L + GL
Sbjct: 262 LTVLNVDNCPAITEEAIPVIVSLPHLKLLHLGKTSVSPDALPQLKPLQELETLFVTNLGL 321
Query: 409 TD 410
+
Sbjct: 322 EE 323
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 25/226 (11%)
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
G ++ L L L+ L + + D+ K +SGL L ++ + VTD G + L L +
Sbjct: 108 GTVLRLAALPNLKRLRV-YGKAFDDAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNE 166
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK--------------- 250
L ++L PVT L S+S L L LNL +++ + E SK
Sbjct: 167 LQDVSLMNSPVTDKTLASISTLPKLTKLNLRGTKITGEAFEPISKLPLESLELAETDFGP 226
Query: 251 --------IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCN 301
I L+ +NL +I +E L +G T+L LN+D+C I +E + + L +
Sbjct: 227 EGMPAIANIEGLEKINLWLTKIDNESLKAFEGKTSLTVLNVDNCPAITEEAIPVIVSLPH 286
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
LK L L T V L L L LE++ ++ G+ + ++L +
Sbjct: 287 LKLLHLGKTSVSPDALPQLKPLQELETLFVTNLGLEEEPAKELEAM 332
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 116/276 (42%), Gaps = 39/276 (14%)
Query: 230 LFYLNLNRCQLSD-DGCEKF-SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
+ ++L SD DG K S ++ L + +D ++ L L NL+ L +
Sbjct: 69 VVVVDLREVAESDLDGAVKLLSNTSTVSELFMPAAAWSDGTVLRLAALPNLKRLRVYGKA 128
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
D +++GL L + DT V G L+ L L+ ++L + ++D +L ++ L
Sbjct: 129 FDDAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNELQDVSLMNSPVTDKTLASISTL 188
Query: 348 SSLKSLNLDARQIT-----------------------DTGLAALTSLTGLTHLDLFGARI 384
L LNL +IT G+ A+ ++ GL ++L+ +I
Sbjct: 189 PKLTKLNLRGTKITGEAFEPISKLPLESLELAETDFGPEGMPAIANIEGLEKINLWLTKI 248
Query: 385 TDSGAAYLRNFKNLRSLEICG----GGLTDAGLTGLVS------LNVSNSRITSAGLRHL 434
+ L+ F+ SL + +T+ + +VS L++ + ++ L L
Sbjct: 249 DNES---LKAFEGKTSLTVLNVDNCPAITEEAIPVIVSLPHLKLLHLGKTSVSPDALPQL 305
Query: 435 KPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFR 470
KPL+ L +L + + + K L++ PNL F
Sbjct: 306 KPLQELETLFVTNLGLEEEPAKELEAM-FPNLKRFE 340
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L V L S VTD L + L L+ +I+ E + L L SL +
Sbjct: 167 LQDVSLMNSPVTDKTLASISTLPKLTKLNLR-GTKITGEAFEPISKLP-LESLELAETD- 223
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
+GM A A + L K++L + L +G L LN+ C IT+ + +
Sbjct: 224 FGPEGMPAIANIEGLEKINLWLTKIDNESLKAFEGKTSLTVLNVDNCPAITEEAIPVIVS 283
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
L +LK L + + V+ + LK LQ+L L
Sbjct: 284 LPHLKLLHLGKTSVSPDALPQLKPLQELETL 314
>gi|320169763|gb|EFW46662.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 684
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 153/358 (42%), Gaps = 12/358 (3%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVNLKGLMKLES 159
GL+ L SL F NN IT+ + AF+GL L +L L T I GL L
Sbjct: 53 FSGLTALNSL-FLSNNPITSIAVNAFSGLTALTQLSLAGNPLTTIPDN--TFTGLTALTR 109
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
L++ + I +GL L+ L ++ +++T+ GL LT L+L +T+
Sbjct: 110 LDV-YVTQIASISASAFAGLPVLEVLSLNDNQITNIASNTFTGLTALTRLSLFNNNITSI 168
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
+ + L +L YL+L Q++ F + L L+L NEIT GLT L
Sbjct: 169 PASAFADLSALTYLDLAGNQMTSLSANAFIGLTELTYLSLTSNEITSISPAAFTGLTALT 228
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
L L++ I + GL +L L + + Q+ S +GL +L ++L ++
Sbjct: 229 ELVLENNLIASISANDFAGLTSLNLLRMRNNQITSLSANGFAGLPSLTELDLDLNLMTSI 288
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
AGL+SL L++ QIT L LT L L +IT A +L
Sbjct: 289 DASAFAGLTSLNLLSVQNNQITSISANGFAGLPSLTALGLESNQITSISANAFAGLTSLN 348
Query: 400 SLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
L + G +T A +T L L++ ++ITS L + L L S T
Sbjct: 349 FLRLEGNQITSISANAFAAVTSLSVLSLHFNQITSFSANAFTGLTTMMYLLLNSNPFT 406
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 132/293 (45%), Gaps = 6/293 (2%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N T SGLT L SL +S + +T + GL LT L+L G P+T ++ +
Sbjct: 43 NLFTSVAANAFSGLTALNSLFLSNNPITSIAVNAFSGLTALTQLSLAGNPLTTIPDNTFT 102
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
L +L L++ Q++ F+ + L+VL+L N+IT+ GLT L L+L +
Sbjct: 103 GLTALTRLDVYVTQIASISASAFAGLPVLEVLSLNDNQITNIASNTFTGLTALTRLSLFN 162
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
I L L L+L+ Q+ S GLT L ++L+ I+ S
Sbjct: 163 NNITSIPASAFADLSALTYLDLAGNQMTSLSANAFIGLTELTYLSLTSNEITSISPAAFT 222
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
GL++L L L+ I LT L L + +IT A +L L++
Sbjct: 223 GLTALTELVLENNLIASISANDFAGLTSLNLLRMRNNQITSLSANGFAGLPSLTELDLDL 282
Query: 406 GGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
+T AGLT L L+V N++ITS L +L +L LES ++T+
Sbjct: 283 NLMTSIDASAFAGLTSLNLLSVQNNQITSISANGFAGLPSLTALGLESNQITS 335
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 96/216 (44%), Gaps = 9/216 (4%)
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
L L N T GLT L SL L + I + +GL L L L+ + +
Sbjct: 38 LRLHLNLFTSVAANAFSGLTALNSLFLSNNPITSIAVNAFSGLTALTQLSLAGNPLTTIP 97
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
+GLT L +++ T I+ S AGL L+ L+L+ QIT+ T LT LT
Sbjct: 98 DNTFTGLTALTRLDVYVTQIASISASAFAGLPVLEVLSLNDNQITNIASNTFTGLTALTR 157
Query: 377 LDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAG 430
L LF IT A+ + L L++ G +T GLT L L+++++ ITS
Sbjct: 158 LSLFNNNITSIPASAFADLSALTYLDLAGNQMTSLSANAFIGLTELTYLSLTSNEITSIS 217
Query: 431 LRHLKPLKNLRSLTLES---CKVTANDIKRLQSRDL 463
L L L LE+ ++AND L S +L
Sbjct: 218 PAAFTGLTALTELVLENNLIASISANDFAGLTSLNL 253
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 124/299 (41%), Gaps = 36/299 (12%)
Query: 15 VYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQG----SSLLSVDLSGSDVT 70
VY + +S AF + ++ +ND + IAS ++L + L +++T
Sbjct: 112 VYVTQIASISASAFAGLPVLEVL-----SLNDNQITNIASNTFTGLTALTRLSLFNNNIT 166
Query: 71 DSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGL 130
D S L LD Q++ GL+ LT LS N IT+ AF GL
Sbjct: 167 SIPASAFADLSALTYLDLA-GNQMTSLSANAFIGLTELTYLSLTSNE-ITSISPAAFTGL 224
Query: 131 INLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCS 190
L +L LE + GL L L ++ N IT +GL +L L + +
Sbjct: 225 TALTELVLENNLIASISANDFAGLTSLNLLRMR-NNQITSLSANGFAGLPSLTELDLDLN 283
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVTA------ACLDSLSALG---------------- 228
+T + GL L LL+++ +T+ A L SL+ALG
Sbjct: 284 LMTSIDASAFAGLTSLNLLSVQNNQITSISANGFAGLPSLTALGLESNQITSISANAFAG 343
Query: 229 --SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
SL +L L Q++ F+ + SL VL+L FN+IT GLT + L L+S
Sbjct: 344 LTSLNFLRLEGNQITSISANAFAAVTSLSVLSLHFNQITSFSANAFTGLTTMMYLLLNS 402
>gi|149173875|ref|ZP_01852504.1| hypothetical protein PM8797T_05540 [Planctomyces maris DSM 8797]
gi|148847405|gb|EDL61739.1| hypothetical protein PM8797T_05540 [Planctomyces maris DSM 8797]
Length = 525
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 162/387 (41%), Gaps = 44/387 (11%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
+ G+ TD GL ++ L+ LD + Q++D G+ HL L L L T
Sbjct: 104 IKGNHFTDDGLRYVGQLKKLRYLDLSVNYQLTDAGMRHLESLKQLEHLDLSGCRRFTDAS 163
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK-----WCN------------ 166
K+ A L +L L L + + L L L +L+ L +K W N
Sbjct: 164 GKSLAQLTSLRTLKLRQTSLTPDVLTALSQLPELKHLAVKYSKGMWLNENTIVPLEKMPL 223
Query: 167 ------CITDSDMKPLSGLTNLKSLQISCSK-VTDSGIAYLKGLQKLTLLNL---EGCPV 216
I D ++ ++ + +LKSL + + D ++YL ++++ LN+ G
Sbjct: 224 EELEGMLIKDENLPLIAQMKSLKSLPFEQDRSIKDDQLSYLTHIRQIKKLNIVLTRGTSD 283
Query: 217 TAACLDSLSALGSLFYLNL---NRCQ---LSDDGCEKFSKIGSLKVLNLGF-NEITDECL 269
T+ + L AL L L++ N + L G +KI +LK L +G N E +
Sbjct: 284 TSQLI-QLQALPELETLSISLGNSTEGDPLDRSGLLALAKIPALKELGIGLVNVPILEAI 342
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
H + L +LN+D+ L L + LK L + V L + +LE I
Sbjct: 343 SHCTQVQKL-NLNVDTSQFQPTDLAYLKEMSRLKDLTVQIALVSDDLWATLGQVKSLEEI 401
Query: 330 NLSF--------TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG 381
+ ++ S SL++L L LK L+L+ +TD GL L L L L
Sbjct: 402 SFNWGWPPQKEPPPFSMTSLKQLQNLPRLKGLDLNGFPVTDEGLGYLGQCRTLERLGLNN 461
Query: 382 ARITDSGAAYLRNFKNLRSLEICGGGL 408
A IT++G LR+ L+ L G +
Sbjct: 462 APITNAGLLQLRHLSQLKKLSFYGSKI 488
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 182/440 (41%), Gaps = 89/440 (20%)
Query: 92 IQISDGGLEHLRGLSNLTSLSFR-----RNNAITAQGMKAFAGLINLVKLDLERCTRI-H 145
+ ++D L L+ L + +L+ R + N T G++ L L LDL ++
Sbjct: 77 LPLADDDLTVLKELPEVQTLTLRGVHTIKGNHFTDDGLRYVGQLKKLRYLDLSVNYQLTD 136
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDS---------- 195
G+ +L+ L +LE L++ C TD+ K L+ LT+L++L++ + +T
Sbjct: 137 AGMRHLESLKQLEHLDLSGCRRFTDASGKSLAQLTSLRTLKLRQTSLTPDVLTALSQLPE 196
Query: 196 ----GIAYLKG----------LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ-L 240
+ Y KG L+K+ L LEG + L ++ + SL L + + +
Sbjct: 197 LKHLAVKYSKGMWLNENTIVPLEKMPLEELEGMLIKDENLPLIAQMKSLKSLPFEQDRSI 256
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDEC--LVHLKGLTNLE--SLNLDSCGIGDE----G 292
DD + I +K LN+ T + L+ L+ L LE S++L + GD G
Sbjct: 257 KDDQLSYLTHIRQIKKLNIVLTRGTSDTSQLIQLQALPELETLSISLGNSTEGDPLDRSG 316
Query: 293 LVNLT----------GLCNLKCLE--------------LSDTQVGSSGLRHLSGLTNLES 328
L+ L GL N+ LE + +Q + L +L ++ L+
Sbjct: 317 LLALAKIPALKELGIGLVNVPILEAISHCTQVQKLNLNVDTSQFQPTDLAYLKEMSRLKD 376
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNL--------DARQITDTGLAALTSLTGLTHLDLF 380
+ + +SD L + SL+ ++ + + T L L +L L LDL
Sbjct: 377 LTVQIALVSDDLWATLGQVKSLEEISFNWGWPPQKEPPPFSMTSLKQLQNLPRLKGLDLN 436
Query: 381 GARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNL 440
G +TD G YL R+LE G ++N+ IT+AGL L+ L L
Sbjct: 437 GFPVTDEGLGYL---GQCRTLERLG---------------LNNAPITNAGLLQLRHLSQL 478
Query: 441 RSLTLESCKVTANDIKRLQS 460
+ L+ K+ + L
Sbjct: 479 KKLSFYGSKIDREPAEELHQ 498
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 155/333 (46%), Gaps = 40/333 (12%)
Query: 138 LERCTRIHGGLVNLKGLMKLESLNIKWCNCI-----TDSDMKPLSGLTNLKSLQISCS-K 191
L+R L LK L ++++L ++ + I TD ++ + L L+ L +S + +
Sbjct: 74 LKRLPLADDDLTVLKELPEVQTLTLRGVHTIKGNHFTDDGLRYVGQLKKLRYLDLSVNYQ 133
Query: 192 VTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
+TD+G+ +L+ L++L L+L GC T A SL+ L SL L L + L+ D S+
Sbjct: 134 LTDAGMRHLESLKQLEHLDLSGCRRFTDASGKSLAQLTSLRTLKLRQTSLTPDVLTALSQ 193
Query: 251 IGSLKVLNLGFNE---ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL 307
+ LK L + +++ + + +V L+ + E L+ I DE L + + +LK L
Sbjct: 194 LPELKHLAVKYSKGMWLNENTIVPLEKMPLEE---LEGMLIKDENLPLIAQMKSLKSLPF 250
Query: 308 S-DTQVGSSGLRHLSGLTNLESINLSFT-GISDGS-LRKLAGLSSLKSLNL------DAR 358
D + L +L+ + ++ +N+ T G SD S L +L L L++L++ +
Sbjct: 251 EQDRSIKDDQLSYLTHIRQIKKLNIVLTRGTSDTSQLIQLQALPELETLSISLGNSTEGD 310
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS 418
+ +GL AL + L L + L N L ++ C ++
Sbjct: 311 PLDRSGLLALAKIPALKELGIG-----------LVNVPILEAISHCTQ-------VQKLN 352
Query: 419 LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
LNV S+ L +LK + L+ LT++ V+
Sbjct: 353 LNVDTSQFQPTDLAYLKEMSRLKDLTVQIALVS 385
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
+DL+G VTD GL +L C L+ L N I++ GL LR LS L LSF
Sbjct: 433 LDLNGFPVTDEGLGYLGQCRTLERLGLNNA-PITNAGLLQLRHLSQLKKLSF 483
>gi|222630606|gb|EEE62738.1| hypothetical protein OsJ_17541 [Oryza sativa Japonica Group]
Length = 973
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 10/297 (3%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+V S + L L+ LD + C +ISD G++H+ + +L L + +T G+ A
Sbjct: 649 NVNSSAVWALSGMRTLKELDLSRCSKISDAGIKHIASIESLEKLHVSQ-TGLTDNGVMAI 707
Query: 128 AGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
+ LINL LDL L +L+ L +LE L+I W + IT+ L T+L L I
Sbjct: 708 SSLINLRLLDLGGVRFTDKALRSLQVLTQLEHLDI-WGSEITNEGASVLIAFTSLSFLNI 766
Query: 188 SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEK 247
S ++VT L L L LN+ C + + C L L L ++ + E
Sbjct: 767 SWTRVT-----CLPILPTLRCLNMSNCTIHSICNGEFQVLIHLEKLIISAASFGNID-EV 820
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL-CNLKCLE 306
FS I + L + + L L + NLE L+L I + + + + NLK L
Sbjct: 821 FSSILPSSLTYLDMSSCSSSNLYFLGNMRNLEHLDLSYSRIISDAIEYIANIGMNLKFLS 880
Query: 307 LSDTQVGSSGLRHLSG-LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
LS+++V S L L+G + +L +++L+ T I D +L ++ + SL+ LNL I D
Sbjct: 881 LSNSEVTSQALCVLAGTVPSLTTLSLAHTKIDDSALLYISMMPSLRILNLSRTCIKD 937
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 146/310 (47%), Gaps = 27/310 (8%)
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLV-NLKGLMKLESLNIKWCNCITDSDMKPL 176
A+ A+ + L L L C ++ V L G+ L+ L++ C+ I+D+ +K +
Sbjct: 624 AVDAEWLAYLGAFRYLRVLKLADCKNVNSSAVWALSGMRTLKELDLSRCSKISDAGIKHI 683
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+ + +L+ L +S + +TD+G+ + L L LL+L G T L SL L L +L++
Sbjct: 684 ASIESLEKLHVSQTGLTDNGVMAISSLINLRLLDLGGVRFTDKALRSLQVLTQLEHLDIW 743
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEIT-------------DECLVH------LKGLTN 277
+++++G SL LN+ + +T C +H + L +
Sbjct: 744 GSEITNEGASVLIAFTSLSFLNISWTRVTCLPILPTLRCLNMSNCTIHSICNGEFQVLIH 803
Query: 278 LESLNLDSCGIG--DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 335
LE L + + G DE ++ +L L++S SS L L + NLE ++LS++
Sbjct: 804 LEKLIISAASFGNIDEVFSSILP-SSLTYLDMSSCS--SSNLYFLGNMRNLEHLDLSYSR 860
Query: 336 ISDGSLRKLAGLS-SLKSLNLDARQITDTGLAALT-SLTGLTHLDLFGARITDSGAAYLR 393
I ++ +A + +LK L+L ++T L L ++ LT L L +I DS Y+
Sbjct: 861 IISDAIEYIANIGMNLKFLSLSNSEVTSQALCVLAGTVPSLTTLSLAHTKIDDSALLYIS 920
Query: 394 NFKNLRSLEI 403
+LR L +
Sbjct: 921 MMPSLRILNL 930
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 25/193 (12%)
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGL 317
G + E L +L L L L C + + L+G+ LK L+LS +++ +G+
Sbjct: 621 GHIAVDAEWLAYLGAFRYLRVLKLADCKNVNSSAVWALSGMRTLKELDLSRCSKISDAGI 680
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
+H++ + +LE +++S TG++D + ++ L +L+ L+L + TD L +L LT L HL
Sbjct: 681 KHIASIESLEKLHVSQTGLTDNGVMAISSLINLRLLDLGGVRFTDKALRSLQVLTQLEHL 740
Query: 378 DLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPL 437
D++G+ IT+ GA+ L F T L LN+S +R+T L L
Sbjct: 741 DIWGSEITNEGASVLIAF------------------TSLSFLNISWTRVTC-----LPIL 777
Query: 438 KNLRSLTLESCKV 450
LR L + +C +
Sbjct: 778 PTLRCLNMSNCTI 790
>gi|51850115|dbj|BAD42399.1| leucine-rich repeat protein [Ralstonia solanacearum]
Length = 1035
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 183/408 (44%), Gaps = 14/408 (3%)
Query: 58 SLLSVDLSG---SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
S+ +DLSG S V+++GL +L L SLD + I + G + L ++LTSL+
Sbjct: 632 SVRHLDLSGCTGSAVSEAGLAYLARLP-LASLDLSDT-GIGNRGAQALAASASLTSLNLS 689
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N I G +A L LD+ + G L L SL ++ I D ++
Sbjct: 690 -GNGIGTAGAEALGRNTVLTALDISANPIRNAGAQALASSRSLTSLELR-DTGIEDGGIE 747
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L+ T L+SL IS + ++D A L + LT L GC +T L+ + SL L
Sbjct: 748 ALAANTVLRSLDISGNDLSDQSAAALAANRTLTSLKANGCGLTNDMAQQLARIRSLRTLE 807
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
+ + D G ++ SL+ LNL N IT + L L L+SL++ G GD G +
Sbjct: 808 VGSNSIGDAGVLTIARNASLRSLNLSRNSITPQGLYPLALSRTLKSLDVSRIGCGDRGAL 867
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
L+G L L+L ++ S G R L+ L S++L I + R LA L SLN
Sbjct: 868 LLSGNRALTSLKLGFNRISSEGARRLAANRTLVSLDLRGNTIDVAAARALANAEPLASLN 927
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT 414
+ ++ D AL LT LD+ R++ A L + L SL+I + G
Sbjct: 928 VSDCRLDDAVACALAESRTLTSLDVSWNRLSHRAARALADNPVLASLDISHNDIGPEGAQ 987
Query: 415 GLVS------LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIK 456
L L+ +RI AG R L+ +R T ++ A D+
Sbjct: 988 ALADSASLTILDARANRIGEAGARLLEANTRMRG-TPQNPHFLAQDVP 1034
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 157/356 (44%), Gaps = 29/356 (8%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
LR L SLSF + ++ ++A + LDL CT G V+ GL L
Sbjct: 603 FSRLRNYPALESLSF--HGPLSLADLRALPPSVR--HLDLSGCT---GSAVSEAGLAYLA 655
Query: 159 SLNIKWCNC----ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC 214
L + + I + + L+ +L SL +S + + +G L LT L++
Sbjct: 656 RLPLASLDLSDTGIGNRGAQALAASASLTSLNLSGNGIGTAGAEALGRNTVLTALDISAN 715
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG 274
P+ A +L++ SL L L + D G E + L+ L++ N+++D+ L
Sbjct: 716 PIRNAGAQALASSRSLTSLELRDTGIEDGGIEALAANTVLRSLDISGNDLSDQSAAALAA 775
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
L SL + CG+ ++ L + +L+ LE+ +G +G+ ++ +L S+NLS
Sbjct: 776 NRTLTSLKANGCGLTNDMAQQLARIRSLRTLEVGSNSIGDAGVLTIARNASLRSLNLSRN 835
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
I+ L LA +LKSL++ D G L+ LT L L RI+ GA L
Sbjct: 836 SITPQGLYPLALSRTLKSLDVSRIGCGDRGALLLSGNRALTSLKLGFNRISSEGARRLAA 895
Query: 395 FKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
+ L SL++ G +++V+ +R + + L SL + C++
Sbjct: 896 NRTLVSLDLRGN-----------TIDVAAARALAN-------AEPLASLNVSDCRL 933
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 121/300 (40%), Gaps = 71/300 (23%)
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
D + LSGL + L+ +LKG TL +L+ P T L
Sbjct: 94 DRRALSGLRDHPHLES----------VHLKG--DFTLADLKALPTT------------LR 129
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
+L+L+ C GS K + +L GL LESLN+ IGD
Sbjct: 130 HLDLSEC------------TGSAKSF---------RAIAYLAGLP-LESLNVAGAEIGDG 167
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
G L +LK L + + +SG R L+ LES++L+ I D + LAG SL+
Sbjct: 168 GARLLAANPSLKSLNAASGGISASGARMLAESPTLESLDLTQNAIGDAGAQALAGSRSLR 227
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDL------------------FGARITDSGAAYLR 393
L + +TD G AL L LDL IT GA L
Sbjct: 228 HLAVRNGLVTDVGTRALALNPALVSLDLGNLVTETGNQVEQDGYDKTANNITAQGAWALA 287
Query: 394 NFKNLRSLEICGGGL-TDAGLTGLV------SLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
++L+SL + G L D G+ L SLNV+ + +TSA + L L SL++
Sbjct: 288 QNRSLKSLSVQGNDLCGDDGVRALARNRTLTSLNVAFTNMTSASAKALADNPVLTSLSVR 347
>gi|290993851|ref|XP_002679546.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284093163|gb|EFC46802.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 385
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 134/280 (47%), Gaps = 19/280 (6%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN-----LEGCPVTAACLDSLSALGSLFYL 233
L L L IS +++ G + L++LT L LEG + +S L L L
Sbjct: 86 LQQLTRLVISWNRIGIEGAKAISQLKQLTELEINQIGLEGTKI-------ISELNQLTSL 138
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
N+ ++ G + S++ L L++G N++ E + +++ L L +L++ + IG G
Sbjct: 139 NIANNKMGKQGAKYISEMKQLTKLDIGTNQLGVEGVQYIRKLDKLTALSVFNNVIGFRGA 198
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
+ L + L L +S +G G + +S L NL +NLSF IS + ++ L L L
Sbjct: 199 MLLRKMTQLTELNISTNAIGDVGAKFVSDLPNLAILNLSFNSISYVGAQFISKLPKLTEL 258
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL-RNFKNLRSLEICGGGLTDAG 412
N++ + + G+ ++ + LT+L L RI + G ++ K LR L++C + DAG
Sbjct: 259 NMNQNDLGNEGVKFISGIISLTNLSLQTTRIDEHGVKFISEKLKQLRILKLCENNIGDAG 318
Query: 413 ------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
L L L++ ++ I G + + +K L L +
Sbjct: 319 AKFLITLEKLTDLSLYSNNIGYEGAKAISTMKALTHLRIH 358
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 131/304 (43%), Gaps = 7/304 (2%)
Query: 55 QGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
Q L + +S + + G + L L+ N QI G + + L+ LTSL+
Sbjct: 85 QLQQLTRLVISWNRIGIEGAKAISQLKQLTELEIN---QIGLEGTKIISELNQLTSLNIA 141
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
NN + QG K + + L KLD+ G+ ++ L KL +L++ + N I
Sbjct: 142 -NNKMGKQGAKYISEMKQLTKLDIGTNQLGVEGVQYIRKLDKLTALSV-FNNVIGFRGAM 199
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L +T L L IS + + D G ++ L L +LNL ++ +S L L LN
Sbjct: 200 LLRKMTQLTELNISTNAIGDVGAKFVSDLPNLAILNLSFNSISYVGAQFISKLPKLTELN 259
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-KGLTNLESLNLDSCGIGDEGL 293
+N+ L ++G + S I SL L+L I + + + + L L L L IGD G
Sbjct: 260 MNQNDLGNEGVKFISGIISLTNLSLQTTRIDEHGVKFISEKLKQLRILKLCENNIGDAGA 319
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS-DGSLRKLAGLSSLKS 352
L L L L L +G G + +S + L + + I +G+ L LK
Sbjct: 320 KFLITLEKLTDLSLYSNNIGYEGAKAISTMKALTHLRIHGNPIGIEGAKEIYEQLKELKE 379
Query: 353 LNLD 356
LD
Sbjct: 380 YCLD 383
>gi|397499401|ref|XP_003820442.1| PREDICTED: F-box/LRR-repeat protein 14 [Pan paniscus]
Length = 561
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 170/319 (53%), Gaps = 40/319 (12%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 246 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 305
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 306 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 365
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 366 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 425
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 426 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 484
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGL----RHLSGLTNLESINLSFTGISDGSLRKL 344
+ GL L +C+ ++D GL HLS LT ++ T I+ L ++
Sbjct: 485 MVRQMHGLRTLNIGQCVRITD-----KGLELIAEHLSQLTGIDLYGC--TRITKRGLERI 537
Query: 345 AGLSSLKSLNLDARQITDT 363
L LK LNL Q+TD+
Sbjct: 538 TQLPCLKVLNLGLWQMTDS 556
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 178/368 (48%), Gaps = 54/368 (14%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 228 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 281
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 282 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 339
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-K 273
LS +G + R + +GC +G ++ ++TD L H+ +
Sbjct: 340 -------RHLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTDLSLKHISR 385
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESIN 330
GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L ++
Sbjct: 386 GLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLD 445
Query: 331 LSF-TGISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITD 386
+SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ RITD
Sbjct: 446 VSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITD 505
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
G LE+ L+ LTG+ +RIT GL + L L+ L L
Sbjct: 506 KG------------LELIAEHLSQ--LTGIDLYGC--TRITKRGLERITQLPCLKVLNLG 549
Query: 447 SCKVTAND 454
++T ++
Sbjct: 550 LWQMTDSE 557
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 375 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 434
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 435 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 494
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 495 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGC-----------------------TRITK 531
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 532 RGLERITQLPCLKVLNLGLWQMTD 555
>gi|403286756|ref|XP_003934642.1| PREDICTED: F-box/LRR-repeat protein 14, partial [Saimiri
boliviensis boliviensis]
Length = 349
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 170/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 34 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 93
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT--------NLK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T +L+
Sbjct: 94 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLSLE 153
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 154 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 213
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 214 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 272
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 273 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYG--CTRITKRGLERITQLP 329
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 330 CLKVLNLGLWQMTDS 344
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 179/369 (48%), Gaps = 56/369 (15%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 16 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 69
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 70 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 127
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG-FNEITDECLVHL- 272
LS +G + R + +GC SL+ L L ++TD L H+
Sbjct: 128 R-------HLSDVGIGHLAGMTRS--AAEGCL------SLEQLTLQDCQKLTDLSLKHIS 172
Query: 273 KGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESI 329
+GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L +
Sbjct: 173 RGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGL 232
Query: 330 NLSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARIT 385
++SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ RIT
Sbjct: 233 DVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRIT 292
Query: 386 DSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
D G LE+ L+ LTG+ +RIT GL + L L+ L L
Sbjct: 293 DKG------------LELIAEHLSQ--LTGIDLYGC--TRITKRGLERITQLPCLKVLNL 336
Query: 446 ESCKVTAND 454
++T ++
Sbjct: 337 GLWQMTDSE 345
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 163 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 222
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 223 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 282
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 283 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 319
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 320 RGLERITQLPCLKVLNLGLWQMTD 343
>gi|417302467|ref|ZP_12089567.1| conserved hypothetical protein, secreted [Rhodopirellula baltica
WH47]
gi|327541207|gb|EGF27751.1| conserved hypothetical protein, secreted [Rhodopirellula baltica
WH47]
Length = 341
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 2/242 (0%)
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
D +K LS + + L + + +D + L L L L + G A S+S L +
Sbjct: 83 DGAVKLLSNTSTVSELFMPAAAWSDGTVLRLAALPNLKRLRVYGKAFDDAKAKSISGLPA 142
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L + ++DDG +++ L+ ++L + +TD+ L + L L LNL I
Sbjct: 143 LVAVTFQDTSVTDDGASVLAELNELQDVSLMNSPVTDKTLASISTLPKLTKLNLRGTKIT 202
Query: 290 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 349
E ++ L L+ LEL++T G G+ ++ + LE INL T I + SL+ G +S
Sbjct: 203 GEAFEPISKLP-LESLELAETDFGPEGMPAIANIEGLEKINLWLTKIDNESLKAFEGKTS 261
Query: 350 LKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL 408
L LN+D IT+ + + SL L L L ++ L+ + L +L + GL
Sbjct: 262 LTVLNVDNCPAITEEAIPVIISLPHLKLLHLGKTSVSPDALPQLKPLQELETLFVTNLGL 321
Query: 409 TD 410
+
Sbjct: 322 EE 323
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 25/226 (11%)
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
G ++ L L L+ L + + D+ K +SGL L ++ + VTD G + L L +
Sbjct: 108 GTVLRLAALPNLKRLRV-YGKAFDDAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNE 166
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK--------------- 250
L ++L PVT L S+S L L LNL +++ + E SK
Sbjct: 167 LQDVSLMNSPVTDKTLASISTLPKLTKLNLRGTKITGEAFEPISKLPLESLELAETDFGP 226
Query: 251 --------IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCN 301
I L+ +NL +I +E L +G T+L LN+D+C I +E + + L +
Sbjct: 227 EGMPAIANIEGLEKINLWLTKIDNESLKAFEGKTSLTVLNVDNCPAITEEAIPVIISLPH 286
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
LK L L T V L L L LE++ ++ G+ + ++L +
Sbjct: 287 LKLLHLGKTSVSPDALPQLKPLQELETLFVTNLGLEEEPAKELEAM 332
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 116/276 (42%), Gaps = 39/276 (14%)
Query: 230 LFYLNLNRCQLSD-DGCEKF-SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
+ ++L SD DG K S ++ L + +D ++ L L NL+ L +
Sbjct: 69 VVVVDLREVAESDLDGAVKLLSNTSTVSELFMPAAAWSDGTVLRLAALPNLKRLRVYGKA 128
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
D +++GL L + DT V G L+ L L+ ++L + ++D +L ++ L
Sbjct: 129 FDDAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNELQDVSLMNSPVTDKTLASISTL 188
Query: 348 SSLKSLNLDARQIT-----------------------DTGLAALTSLTGLTHLDLFGARI 384
L LNL +IT G+ A+ ++ GL ++L+ +I
Sbjct: 189 PKLTKLNLRGTKITGEAFEPISKLPLESLELAETDFGPEGMPAIANIEGLEKINLWLTKI 248
Query: 385 TDSGAAYLRNFKNLRSLEICG----GGLTDAGLTGLVS------LNVSNSRITSAGLRHL 434
+ L+ F+ SL + +T+ + ++S L++ + ++ L L
Sbjct: 249 DNES---LKAFEGKTSLTVLNVDNCPAITEEAIPVIISLPHLKLLHLGKTSVSPDALPQL 305
Query: 435 KPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFR 470
KPL+ L +L + + + K L++ PNL F
Sbjct: 306 KPLQELETLFVTNLGLEEEPAKELEAM-FPNLKRFE 340
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L V L S VTD L + L L+ +I+ E + L L SL +
Sbjct: 167 LQDVSLMNSPVTDKTLASISTLPKLTKLNLR-GTKITGEAFEPISKLP-LESLELAETD- 223
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
+GM A A + L K++L + L +G L LN+ C IT+ + +
Sbjct: 224 FGPEGMPAIANIEGLEKINLWLTKIDNESLKAFEGKTSLTVLNVDNCPAITEEAIPVIIS 283
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
L +LK L + + V+ + LK LQ+L L
Sbjct: 284 LPHLKLLHLGKTSVSPDALPQLKPLQELETL 314
>gi|290970038|ref|XP_002668017.1| predicted protein [Naegleria gruberi]
gi|284081041|gb|EFC35273.1| predicted protein [Naegleria gruberi]
Length = 306
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 126/271 (46%), Gaps = 32/271 (11%)
Query: 160 LNIKWCNCITDS--DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
+N+K + DS +K +S + L SL IS +++ G+ ++ G+++LT
Sbjct: 55 INLKVFRYLLDSFEKLKFISDMKRLTSLDISFNQIGVQGVKFISGMKQLT---------- 104
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 277
L+++ Q SD+G + S++ L L + N I DE ++ +
Sbjct: 105 --------------SLDISFNQASDEGAKYISEMKQLTSLGISKNLIGDEGAKYISEMKQ 150
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
L SLNL I DEG ++ + L L++S + G++ + + L S+N+ + GI
Sbjct: 151 LTSLNLYYNEICDEGAKYISEMEQLTSLDISSNLIDVEGVKFIKEMKQLTSLNIYYNGIG 210
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
+ ++ + L SLN+ +I D G ++ + L L + +I D GA Y+ +
Sbjct: 211 VEGAKYISEMKQLTSLNITNNEIGDEGAKYISEMKQLISLIISRNQIGDEGAKYICEMEQ 270
Query: 398 LRSLEICGGGLTDAG------LTGLVSLNVS 422
L SL I G + D G + L SL++S
Sbjct: 271 LTSLNISGNEIGDEGAKYISDMKQLTSLDIS 301
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 115/237 (48%), Gaps = 6/237 (2%)
Query: 99 LEHLRGLSNLTSL--SFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMK 156
L+ + + LTSL SF N I QG+K +G+ L LD+ G + + +
Sbjct: 70 LKFISDMKRLTSLDISF---NQIGVQGVKFISGMKQLTSLDISFNQASDEGAKYISEMKQ 126
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV 216
L SL I N I D K +S + L SL + +++ D G Y+ +++LT L++ +
Sbjct: 127 LTSLGIS-KNLIGDEGAKYISEMKQLTSLNLYYNEICDEGAKYISEMEQLTSLDISSNLI 185
Query: 217 TAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT 276
+ + + L LN+ + +G + S++ L LN+ NEI DE ++ +
Sbjct: 186 DVEGVKFIKEMKQLTSLNIYYNGIGVEGAKYISEMKQLTSLNITNNEIGDEGAKYISEMK 245
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
L SL + IGDEG + + L L +S ++G G +++S + L S+++SF
Sbjct: 246 QLISLIISRNQIGDEGAKYICEMEQLTSLNISGNEIGDEGAKYISDMKQLTSLDISF 302
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 6/185 (3%)
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
E L + + L SL++ IG +G+ ++G+ L L++S Q G +++S + L
Sbjct: 68 EKLKFISDMKRLTSLDISFNQIGVQGVKFISGMKQLTSLDISFNQASDEGAKYISEMKQL 127
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
S+ +S I D + ++ + L SLNL +I D G ++ + LT LD+ I
Sbjct: 128 TSLGISKNLIGDEGAKYISEMKQLTSLNLYYNEICDEGAKYISEMEQLTSLDISSNLIDV 187
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNL 440
G +++ K L SL I G+ G + L SLN++N+ I G +++ +K L
Sbjct: 188 EGVKFIKEMKQLTSLNIYYNGIGVEGAKYISEMKQLTSLNITNNEIGDEGAKYISEMKQL 247
Query: 441 RSLTL 445
SL +
Sbjct: 248 ISLII 252
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 141/314 (44%), Gaps = 38/314 (12%)
Query: 6 ISQQIFN------ELV--YSRCLTEVSLEAFRDCALQD--LCLGQYPGVNDKWMDV-IAS 54
IS+Q FN +LV + + TE +E F ++ + L + + D + + S
Sbjct: 15 ISKQFFNVIKERSKLVIQFKQKFTEKRVELFMKSQFRNRIINLKVFRYLLDSFEKLKFIS 74
Query: 55 QGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
L S+D+S + + G+ + L SLD +F Q SD G +++ + LTSL
Sbjct: 75 DMKRLTSLDISFNQIGVQGVKFISGMKQLTSLDISFN-QASDEGAKYISEMKQLTSLGIS 133
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
+ N I +G K + + L L+L + N I D K
Sbjct: 134 K-NLIGDEGAKYISEMKQLTSLNL-------------------------YYNEICDEGAK 167
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
+S + L SL IS + + G+ ++K +++LT LN+ + +S + L LN
Sbjct: 168 YISEMEQLTSLDISSNLIDVEGVKFIKEMKQLTSLNIYYNGIGVEGAKYISEMKQLTSLN 227
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
+ ++ D+G + S++ L L + N+I DE ++ + L SLN+ IGDEG
Sbjct: 228 ITNNEIGDEGAKYISEMKQLISLIISRNQIGDEGAKYICEMEQLTSLNISGNEIGDEGAK 287
Query: 295 NLTGLCNLKCLELS 308
++ + L L++S
Sbjct: 288 YISDMKQLTSLDIS 301
>gi|13905232|gb|AAH06913.1| Fbx14l protein, partial [Mus musculus]
Length = 327
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 169/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 13 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 72
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 73 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 132
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 133 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 192
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 193 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 251
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 252 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYG--CTRITKRGLERITQLP 308
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 309 CLKVLNLGLWQMTDS 323
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 174/364 (47%), Gaps = 56/364 (15%)
Query: 111 LSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLESLNIKWCNC 167
LS RR+ + QGM N+ L+L C + G ++ + L +LN+ C
Sbjct: 3 LSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQ 56
Query: 168 ITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGCPVTAACLD 222
ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 57 ITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCR------- 107
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-KGLTNLESL 281
LS +G + R + +GC ++ +L+ ++TD L H+ +GLT L L
Sbjct: 108 HLSDVGIGHLAGMTRS--AAEGCLGLEQL-TLQ----DCQKLTDLSLKHISRGLTGLRLL 160
Query: 282 NLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESINLSFT-GIS 337
NL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L +++SF +
Sbjct: 161 NLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVG 220
Query: 338 DGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITDSGAAYL-R 393
D SL +A GL LKSL+L + I+D G+ + + GL L++ RITD G +
Sbjct: 221 DQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAE 280
Query: 394 NFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAN 453
+ L +++ G +RIT GL + L L+ L L ++T +
Sbjct: 281 HLSQLTGIDLYG-----------------CTRITKRGLERITQLPCLKVLNLGLWQMTDS 323
Query: 454 DIKR 457
+ R
Sbjct: 324 EKVR 327
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 142 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 201
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 202 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 261
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 262 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 298
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 299 RGLERITQLPCLKVLNLGLWQMTD 322
>gi|87309591|ref|ZP_01091725.1| probable G protein-coupled receptor [Blastopirellula marina DSM
3645]
gi|87287355|gb|EAQ79255.1| probable G protein-coupled receptor [Blastopirellula marina DSM
3645]
Length = 328
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 5/223 (2%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
+TD+ L L +L+ L ++ S VTD + + L +L L LE VT+A + +L++
Sbjct: 80 MTDNAASHLVMLQSLQRLNLNQSGVTDKSLEIMGALPELRSLYLERTAVTSAGVAALASC 139
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
L L L C + DD E ++ +L +L+L ITD + HL+ L +L++L L
Sbjct: 140 EKLEELMLTECAIQDDALETIGQLPALTLLSLSETPITDAGMFHLQSLPHLKTLYLRDTA 199
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
+ EG L +L+ ++LSD + S + L NLE + L T ++D L +
Sbjct: 200 VTGEGFAMLKSSTDLRLIDLSDNSINRSTIETLRSFPNLERLYLGRTSLTDELLPEFIDT 259
Query: 348 -----SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L+ L + ITD L L L L L + R T
Sbjct: 260 LIRFNPHLRGLAIMEVPITDNSLTPLKRLAELPDLAVVDFRET 302
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 108/246 (43%), Gaps = 16/246 (6%)
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
G++ L N +++D+ + SL+ LNL + +TD+ L + L L SL L+
Sbjct: 68 GAVVELRANSARMTDNAASHLVMLQSLQRLNLNQSGVTDKSLEIMGALPELRSLYLERTA 127
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
+ G+ L L+ L L++ + L + L L ++LS T I+D + L L
Sbjct: 128 VTSAGVAALASCEKLEELMLTECAIQDDALETIGQLPALTLLSLSETPITDAGMFHLQSL 187
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGG 407
LK+L L +T G A L S T L +DL I S LR+F NL L +
Sbjct: 188 PHLKTLYLRDTAVTGEGFAMLKSSTDLRLIDLSDNSINRSTIETLRSFPNLERLYLGRTS 247
Query: 408 LTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS-RDLPNL 466
LTD L + L P +LR L + +T N + L+ +LP+L
Sbjct: 248 LTDELLPEFID-----------TLIRFNP--HLRGLAIMEVPITDNSLTPLKRLAELPDL 294
Query: 467 --VSFR 470
V FR
Sbjct: 295 AVVDFR 300
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 84/178 (47%)
Query: 185 LQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
L+ + +++TD+ ++L LQ L LNL VT L+ + AL L L L R ++ G
Sbjct: 73 LRANSARMTDNAASHLVMLQSLQRLNLNQSGVTDKSLEIMGALPELRSLYLERTAVTSAG 132
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
+ L+ L L I D+ L + L L L+L I D G+ +L L +LK
Sbjct: 133 VAALASCEKLEELMLTECAIQDDALETIGQLPALTLLSLSETPITDAGMFHLQSLPHLKT 192
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
L L DT V G L T+L I+LS I+ ++ L +L+ L L +TD
Sbjct: 193 LYLRDTAVTGEGFAMLKSSTDLRLIDLSDNSINRSTIETLRSFPNLERLYLGRTSLTD 250
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 106/260 (40%), Gaps = 34/260 (13%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
+++D HL L +L L+ ++ +T + ++ L L L LER G+ L
Sbjct: 79 RMTDNAASHLVMLQSLQRLNLNQS-GVTDKSLEIMGALPELRSLYLERTAVTSAGVAALA 137
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
KLE L + C I D ++ + L L L +S + +TD+G+ +L+ L L L L
Sbjct: 138 SCEKLEELMLTEC-AIQDDALETIGQLPALTLLSLSETPITDAGMFHLQSLPHLKTLYLR 196
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
VT +G L++++L N I + L
Sbjct: 197 DTAVTG------------------------EGFAMLKSSTDLRLIDLSDNSINRSTIETL 232
Query: 273 KGLTNLESLNLDSCGIGDEGLVNL--------TGLCNLKCLELSDTQVGSSGLRHLSGLT 324
+ NLE L L + DE L L L +E+ T + L+ L+ L
Sbjct: 233 RSFPNLERLYLGRTSLTDELLPEFIDTLIRFNPHLRGLAIMEVPITDNSLTPLKRLAELP 292
Query: 325 NLESINLSFTGISDGSLRKL 344
+L ++ TG++ G+ ++L
Sbjct: 293 DLAVVDFRETGVTRGAFQEL 312
>gi|320163290|gb|EFW40189.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 830
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 172/422 (40%), Gaps = 39/422 (9%)
Query: 63 DLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQ 122
DL +D+T + + L+SL QI+ GL LT L+ RRN ++A
Sbjct: 18 DLYFTDITSIPAGTFANLTALESLSL-VSGQITSVSPNAFAGLVALTELNLRRN-PLSAV 75
Query: 123 GMKAFAGLINLVKLDL---ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGL 179
AF GL L +L+L E T +L L L SL I ++ L L
Sbjct: 76 PTSAFTGLTALQRLNLDHNEITTLSANAFPHLPALTSL-SLTDNQLTTIPENAFAGLGAL 134
Query: 180 TNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ 239
TNL + + + ++ A GL LT L L + + S + L L L +N
Sbjct: 135 TNLDLTENQLTTIPENAFA---GLGALTNLQLPSNKIVSMAAISFTGLAGLTTLIMNNNL 191
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS---CGIGDEGLVNL 296
++ + +L+VL+L +N IT GL +L SL++ + G+ L NL
Sbjct: 192 VTTIPENALPGLAALEVLDLRYNSITSVSGNAFAGLLSLRSLDISANAFAGLTALTLFNL 251
Query: 297 T---------------------GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 335
T GL L L L+ ++ S SGL+ L S+ L+
Sbjct: 252 TALHTLTLENNLLTSISANAFSGLSALTWLHLAYNRLTSISANAFSGLSALSSLYLNNNP 311
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF 395
+ + GL+SLKSL L A Q+T A L LT+L L RI A
Sbjct: 312 CTAIAAEAFNGLTSLKSLTLVANQLTSISANAFVGLNALTYLYLQNNRIVSFSADAFTGL 371
Query: 396 KNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
L L+I +T GLT LV L + ++ITS L LR L L S +
Sbjct: 372 PVLIYLDIYSNPITSIPSNAFTGLTKLVFLRLDTNQITSISANAFTELSALRGLWLHSNR 431
Query: 450 VT 451
+T
Sbjct: 432 IT 433
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 159/378 (42%), Gaps = 37/378 (9%)
Query: 81 SNLQSLDFNFC--IQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL 138
+N D F I G +L L +L+ +S + IT+ AFAGL+ L +L+L
Sbjct: 12 TNTTQFDLYFTDITSIPAGTFANLTALESLSLVSGQ----ITSVSPNAFAGLVALTELNL 67
Query: 139 ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIA 198
R N ++ +GLT L+ L + +++T
Sbjct: 68 RR-------------------------NPLSAVPTSAFTGLTALQRLNLDHNEITTLSAN 102
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN 258
L LT L+L +T ++ + LG+L L+L QL+ F+ +G+L L
Sbjct: 103 AFPHLPALTSLSLTDNQLTTIPENAFAGLGALTNLDLTENQLTTIPENAFAGLGALTNLQ 162
Query: 259 LGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
L N+I + GL L +L +++ + L GL L+ L+L + S
Sbjct: 163 LPSNKIVSMAAISFTGLAGLTTLIMNNNLVTTIPENALPGLAALEVLDLRYNSITSVSGN 222
Query: 319 HLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 378
+GL +L S+++S + + L L++L +L L+ +T A + L+ LT L
Sbjct: 223 AFAGLLSLRSLDISANAFAGLTALTLFNLTALHTLTLENNLLTSISANAFSGLSALTWLH 282
Query: 379 LFGARITDSGAAYLRNFKNLRSLEI----CGGGLTDA--GLTGLVSLNVSNSRITSAGLR 432
L R+T A L SL + C +A GLT L SL + +++TS
Sbjct: 283 LAYNRLTSISANAFSGLSALSSLYLNNNPCTAIAAEAFNGLTSLKSLTLVANQLTSISAN 342
Query: 433 HLKPLKNLRSLTLESCKV 450
L L L L++ ++
Sbjct: 343 AFVGLNALTYLYLQNNRI 360
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 125/301 (41%), Gaps = 12/301 (3%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLER--CTRIHGGLVNLKGLMKLES 159
GL+ LT+L NN +T A GL L LDL T + G GL+ L S
Sbjct: 176 FTGLAGLTTL-IMNNNLVTTIPENALPGLAALEVLDLRYNSITSVSGNA--FAGLLSLRS 232
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG---CPV 216
L+I N L LT L +L + + +T GL LT L+L +
Sbjct: 233 LDIS-ANAFAGLTALTLFNLTALHTLTLENNLLTSISANAFSGLSALTWLHLAYNRLTSI 291
Query: 217 TAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT 276
+A LSAL SL YLN N C + E F+ + SLK L L N++T GL
Sbjct: 292 SANAFSGLSALSSL-YLNNNPC--TAIAAEAFNGLTSLKSLTLVANQLTSISANAFVGLN 348
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
L L L + I TGL L L++ + S +GLT L + L I
Sbjct: 349 ALTYLYLQNNRIVSFSADAFTGLPVLIYLDIYSNPITSIPSNAFTGLTKLVFLRLDTNQI 408
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
+ S LS+L+ L L + +IT A LT LT+L L +T + +
Sbjct: 409 TSISANAFTELSALRGLWLHSNRITTLSANAFIGLTALTNLPLNDNPLTTTPPGLFKGLP 468
Query: 397 N 397
N
Sbjct: 469 N 469
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 6/202 (2%)
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
+L F +IT LT LESL+L S I GL L L L + +
Sbjct: 17 FDLYFTDITSIPAGTFANLTALESLSLVSGQITSVSPNAFAGLVALTELNLRRNPLSAVP 76
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
+GLT L+ +NL I+ S L +L SL+L Q+T A L LT+
Sbjct: 77 TSAFTGLTALQRLNLDHNEITTLSANAFPHLPALTSLSLTDNQLTTIPENAFAGLGALTN 136
Query: 377 LDLFGARITD------SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAG 430
LDL ++T +G L N + + + ++ GL GL +L ++N+ +T+
Sbjct: 137 LDLTENQLTTIPENAFAGLGALTNLQLPSNKIVSMAAISFTGLAGLTTLIMNNNLVTTIP 196
Query: 431 LRHLKPLKNLRSLTLESCKVTA 452
L L L L L +T+
Sbjct: 197 ENALPGLAALEVLDLRYNSITS 218
>gi|291392871|ref|XP_002712822.1| PREDICTED: F-box/LRR-repeat protein 14-like [Oryctolagus cuniculus]
Length = 400
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 171/337 (50%), Gaps = 36/337 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKTLNLRSC 179
Query: 215 PVTA-------ACLDSLSALG--SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A + +A G L L L CQ L+D + S+ + L++LNL F
Sbjct: 180 RHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCG 239
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRH 319
I+D L+HL + +L SLNL SC I D G+++L G L L++S +VG L +
Sbjct: 240 GISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAY 299
Query: 320 LS-GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALTS-LTGLT 375
++ GL L+S++L ISD + R + + L++LN+ +ITD GL + L+ LT
Sbjct: 300 IAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLT 359
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
+DL+G RIT G + L+ L + +TD+
Sbjct: 360 GIDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDS 396
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 174/331 (52%), Gaps = 56/331 (16%)
Query: 61 SVDLSG-SDVTDSGLIH--LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
S++LSG ++TD+GL H +++ +L++L+ + C QI+D L +
Sbjct: 94 SLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRI--------------- 138
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRI--HGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
AQ +K L L+L C+ I G L+ GL +L++LN++ C ++D +
Sbjct: 139 ---AQYLKG------LEVLELGGCSNITNTGLLLIAWGLQRLKTLNLRSCRHLSDVGIGH 189
Query: 176 LSGLTN--------LKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSL 224
L+G+T L+ L + C K+TD + ++ +GL L LLNL C ++ A L L
Sbjct: 190 LAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHL 249
Query: 225 SALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLE 279
S +GSL LNL C +SD G + +GSL++ L++ F +++ D+ L ++ +GL L+
Sbjct: 250 SHMGSLRSLNLRSCDNISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLK 308
Query: 280 SLNLDSCGIGDEGL----VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLS 332
SL+L SC I D+G+ + GL L +C+ ++D + HLS LT ++
Sbjct: 309 SLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC- 366
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
T I+ L ++ L LK LNL Q+TD+
Sbjct: 367 -TRITKRGLERITQLPCLKVLNLGLWQMTDS 396
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 127/266 (47%), Gaps = 43/266 (16%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEH 101
+ D + IA L ++L G S++T++GL+ + L++L+ C +SD G+ H
Sbjct: 130 ITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKTLNLRSCRHLSDVGIGH 189
Query: 102 LRGLSN--------LTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRIH-GGLVNL 151
L G++ L L+ + +T +K + GL L L+L C I GL++L
Sbjct: 190 LAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHL 249
Query: 152 KGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYL-KGLQKLTL 208
+ L SLN++ C+ I+D+ + L+ G L L +S C KV D +AY+ +GL L
Sbjct: 250 SHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKS 309
Query: 209 LNLEGCPVTAACLDSL-SALGSLFYLNLNRC---------------------------QL 240
L+L C ++ ++ + + L LN+ +C ++
Sbjct: 310 LSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRI 369
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITD 266
+ G E+ +++ LKVLNLG ++TD
Sbjct: 370 TKRGLERITQLPCLKVLNLGLWQMTD 395
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 272 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 322
++G+ N+ESLNL C G+G + + L L C +++D+ +G ++L G
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIA-QYLKG 144
Query: 323 LTNLE---SINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLD 378
L LE N++ TG+ L GL LK+LNL + R ++D G+ L +T
Sbjct: 145 LEVLELGGCSNITNTGL----LLIAWGLQRLKTLNLRSCRHLSDVGIGHLAGMT------ 194
Query: 379 LFGARITDSGAAYLRNFKNLRSLEICGGGLTD-------AGLTGLVSLNVSN-SRITSAG 430
R G L +L+ C LTD GLTGL LN+S I+ AG
Sbjct: 195 ----RSAAEGCLGLEQL----TLQDCQK-LTDLSLKHISRGLTGLRLLNLSFCGGISDAG 245
Query: 431 LRHLKPLKNLRSLTLESC 448
L HL + +LRSL L SC
Sbjct: 246 LLHLSHMGSLRSLNLRSC 263
>gi|290991638|ref|XP_002678442.1| leucine rich repeat domain-containing protein [Naegleria gruberi]
gi|284092054|gb|EFC45698.1| leucine rich repeat domain-containing protein [Naegleria gruberi]
Length = 646
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 165/343 (48%), Gaps = 38/343 (11%)
Query: 64 LSGSDVTD-SGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLS-NLTSLSFRRNNAITA 121
L+ S VT +GL L+ S+ +S+ C +++G L+ L L +L SL+ NN I +
Sbjct: 256 LTSSAVTSLTGLTSLEMVSSHRSIGSKGCKYLANGKLKCLTSLDVSLESLNETNNNGIKS 315
Query: 122 QGMKAFAG--LINLVKLDL-------ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
G K A L +L++L+L + C + G GL+ L LN+ C D+
Sbjct: 316 NGCKYLANGNLNHLIQLNLSGNRIYSKGCQYLSNG-----GLLTLTHLNLSCCALDFDAC 370
Query: 173 MKPLSG-LTNLKSLQISCSKVTDSGIAYL--KGLQKLTLLNLEGCPVTAA--CLDSLSAL 227
+G L NL L +S + + SGI ++ + LT L+LE C V + + +
Sbjct: 371 QYLGNGNLKNLVQLNLSKNMLIGSGIQFIFNGNMPNLTWLSLESCEVRPSDCAFIGNADV 430
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL----------GFNEITDECLVHLKGLTN 277
SL YLN++ +SD+GC+ +K L + +L GF E+T G+
Sbjct: 431 SSLVYLNISNNPISDEGCKNLAKAQFLSLQDLYLRDCQIGSSGFAELT------ANGIGK 484
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
L L +D+ IGDEG +N++ L L L +S+ +GS G R +S L L+ + +S +
Sbjct: 485 LTKLYVDNNNIGDEGCLNISSLPFLNLLSVSNNNLGSKGCRCISLLPQLQHLTISRNNVG 544
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
L LS L+ L+L I D G L + LT++ +F
Sbjct: 545 SSGCLYLNALSKLEYLDLVGNDIRDAGCEILCN-GSLTNVRVF 586
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 174/400 (43%), Gaps = 52/400 (13%)
Query: 89 NFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGL 148
+ C ++ + L GL++L +S R +I ++G K A +G L
Sbjct: 251 HLCEYLTSSAVTSLTGLTSLEMVSSHR--SIGSKGCKYLA----------------NGKL 292
Query: 149 VNLKGL-MKLESLNIKWCNCITDSDMKPLSG--LTNLKSLQISCSKVTDSGIAYLK--GL 203
L L + LESLN N I + K L+ L +L L +S +++ G YL GL
Sbjct: 293 KCLTSLDVSLESLNETNNNGIKSNGCKYLANGNLNHLIQLNLSGNRIYSKGCQYLSNGGL 352
Query: 204 QKLTLLNLEGCPVTAACLDSLSALGS-----LFYLNLNRCQLSDDGCEKF--SKIGSLKV 256
LT LNL C A D+ LG+ L LNL++ L G + + +L
Sbjct: 353 LTLTHLNLSCC---ALDFDACQYLGNGNLKNLVQLNLSKNMLIGSGIQFIFNGNMPNLTW 409
Query: 257 LNLGFNEI--TDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG--LCNLKCLELSDTQV 312
L+L E+ +D + +++L LN+ + I DEG NL +L+ L L D Q+
Sbjct: 410 LSLESCEVRPSDCAFIGNADVSSLVYLNISNNPISDEGCKNLAKAQFLSLQDLYLRDCQI 469
Query: 313 GSSGLRHLS--GLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
GSSG L+ G+ L + + I D ++ L L L++ + G ++
Sbjct: 470 GSSGFAELTANGIGKLTKLYVDNNNIGDEGCLNISSLPFLNLLSVSNNNLGSKGCRCISL 529
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRI---- 426
L L HL + + SG YL L L++ G + DAG L + +++N R+
Sbjct: 530 LPQLQHLTISRNNVGSSGCLYLNALSKLEYLDLVGNDIRDAGCEILCNGSLTNVRVFLLN 589
Query: 427 -TSAGLRHLKPLKN-----LRSLTLESCK---VTANDIKR 457
GL +K L N L + L+ K + AN I+R
Sbjct: 590 QNLIGLEGVKFLLNADFPKLEEIHLQDAKDGSIHANTIER 629
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 33/192 (17%)
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSG-----LTNL----ESIN-LSFTGISDGSL 341
+ +LTGL +L+ + S +GS G ++L+ LT+L ES+N + GI
Sbjct: 260 AVTSLTGLTSLEMVS-SHRSIGSKGCKYLANGKLKCLTSLDVSLESLNETNNNGIKSNGC 318
Query: 342 RKLAG--LSSLKSLNLDARQITDTGLAALTS--LTGLTHLDLFGARITDSGAAYLRNFKN 397
+ LA L+ L LNL +I G L++ L LTHL+L + YL N
Sbjct: 319 KYLANGNLNHLIQLNLSGNRIYSKGCQYLSNGGLLTLTHLNLSCCALDFDACQYLGN--- 375
Query: 398 LRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHL--KPLKNLRSLTLESCKVTANDI 455
L LV LN+S + + +G++ + + NL L+LESC+V +D
Sbjct: 376 -------------GNLKNLVQLNLSKNMLIGSGIQFIFNGNMPNLTWLSLESCEVRPSDC 422
Query: 456 KRLQSRDLPNLV 467
+ + D+ +LV
Sbjct: 423 AFIGNADVSSLV 434
>gi|300693896|ref|YP_003749869.1| type III effector protein [Ralstonia solanacearum PSI07]
gi|299075933|emb|CBJ35242.1| leucine-rich-repeat type III effector protein (GALA2) [Ralstonia
solanacearum PSI07]
Length = 1002
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 162/350 (46%), Gaps = 7/350 (2%)
Query: 56 GSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
G L S+DLS + + D G L ++L SL+ + +ISD G ++LTSL+ R
Sbjct: 599 GRKLESLDLSDTPIGDRGAQLLASSTSLTSLNLSGN-EISDAGAAAFADNTSLTSLNLRG 657
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI--KWCNCITDSDM 173
N+ I+ G +A L LD+ + G+ L L SLN+ W I D +
Sbjct: 658 NH-ISDAGAEALGRNTVLTSLDVSANPIGNTGVQALASSRSLTSLNLCSTW---IEDEGV 713
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
+ L+ T L+SL IS ++ A L + L L C +T L+++ SL L
Sbjct: 714 EALASNTVLRSLDISHNRFGAQFAAELAQNRTLASLKANHCSLTNNVAQQLASIRSLTAL 773
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
L+ + D G + + SL+ L+L N I L L L SL++ G GD G
Sbjct: 774 ELSSNLIDDAGVQAIVRNASLRSLDLSQNPIGLGGLHALALSRTLTSLDVSCIGCGDRGG 833
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
+ L+ +L L+L + S G++ L+ +L S++LS I + R LA L SL
Sbjct: 834 LVLSKSRSLTLLKLGSNGIASEGVQILAANRSLISLDLSGNTIDVVAARALAKNPRLASL 893
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
N + + D ++AL LT LD+ R+ GA L + L SL I
Sbjct: 894 NASSCGLDDAAVSALAESRSLTSLDVSKNRLFSPGARALAGNRVLTSLNI 943
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 173/393 (44%), Gaps = 27/393 (6%)
Query: 95 SDGGLEHLRGLS----NLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGL-- 148
S G R LS NL + R +T AF+ L N L+ HG L
Sbjct: 510 SHAGPRTRRALSTVSRNLRDAAVARTKHLTVWDKAAFSRLGNYSALE---SLSFHGNLTI 566
Query: 149 VNLKGLMK-LESLNIKWCN--CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
+LK L + L++ C ++ + + L+G L+SL +S + + D G L
Sbjct: 567 ADLKALPPSVRHLDLSGCTGTAVSGAGLAYLAG-RKLESLDLSDTPIGDRGAQLLASSTS 625
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
LT LNL G ++ A + + SL LNL +SD G E + L L++ N I
Sbjct: 626 LTSLNLSGNEISDAGAAAFADNTSLTSLNLRGNHISDAGAEALGRNTVLTSLDVSANPIG 685
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
+ + L +L SLNL S I DEG+ L L+ L++S + G+ L+
Sbjct: 686 NTGVQALASSRSLTSLNLCSTWIEDEGVEALASNTVLRSLDISHNRFGAQFAAELAQNRT 745
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L S+ + +++ ++LA + SL +L L + I D G+ A+ L LDL I
Sbjct: 746 LASLKANHCSLTNNVAQQLASIRSLTALELSSNLIDDAGVQAIVRNASLRSLDLSQNPIG 805
Query: 386 DSGAAYLRNFKNLRSLEI----CG--GGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKN 439
G L + L SL++ CG GGL + L L + ++ I S G++ L ++
Sbjct: 806 LGGLHALALSRTLTSLDVSCIGCGDRGGLVLSKSRSLTLLKLGSNGIASEGVQILAANRS 865
Query: 440 LRSLTLESCKVTANDIKRLQSRDL---PNLVSF 469
L SL L + N I + +R L P L S
Sbjct: 866 LISLDL-----SGNTIDVVAARALAKNPRLASL 893
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 168/404 (41%), Gaps = 34/404 (8%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
L + S L+SL F+ + I+D L+ L LS A++ G+ AG L L
Sbjct: 549 LGNYSALESLSFHGNLTIAD--LKALPPSVRHLDLSGCTGTAVSGAGLAYLAGR-KLESL 605
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG 196
DL G L L SLN+ N I+D+ + T+L SL + + ++D+G
Sbjct: 606 DLSDTPIGDRGAQLLASSTSLTSLNLS-GNEISDAGAAAFADNTSLTSLNLRGNHISDAG 664
Query: 197 IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 256
L LT L++ P+ + +L++ SL LNL + D+G E + L+
Sbjct: 665 AEALGRNTVLTSLDVSANPIGNTGVQALASSRSLTSLNLCSTWIEDEGVEALASNTVLRS 724
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
L++ N + L L SL + C + + L + +L LELS + +G
Sbjct: 725 LDISHNRFGAQFAAELAQNRTLASLKANHCSLTNNVAQQLASIRSLTALELSSNLIDDAG 784
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLA-------------------GL-----SSLKS 352
++ + +L S++LS I G L LA GL SL
Sbjct: 785 VQAIVRNASLRSLDLSQNPIGLGGLHALALSRTLTSLDVSCIGCGDRGGLVLSKSRSLTL 844
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
L L + I G+ L + L LDL G I A L L SL GL DA
Sbjct: 845 LKLGSNGIASEGVQILAANRSLISLDLSGNTIDVVAARALAKNPRLASLNASSCGLDDAA 904
Query: 413 LTGLV------SLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
++ L SL+VS +R+ S G R L + L SL + ++
Sbjct: 905 VSALAESRSLTSLDVSKNRLFSPGARALAGNRVLTSLNISHNRI 948
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 125/292 (42%), Gaps = 27/292 (9%)
Query: 72 SGLIHLKDCSNLQSLDFNFCIQISDG-GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGL 130
S + H + LQ + + I D L LR NL S+ + N T +KA
Sbjct: 74 SAVYHDPQTAALQRVTH---LSIHDQRALSELRYYPNLESVHLKGN--FTLADLKALPA- 127
Query: 131 INLVKLDLERCT---RIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L+ LDL CT R + L L LESLN+K I D + L+ +LK+L +
Sbjct: 128 -TLLHLDLSECTGSARSSKAIAYLASL-PLESLNVKGAQ-IGDHGARLLAANPSLKTLNM 184
Query: 188 SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEK 247
+ + +G A L + L L+L + + +L+A SL L ++ C ++D G E
Sbjct: 185 AIGGIGAAGAANLAESRTLMSLDLTQNKIGDKGVQALAASRSLTNLTVSNCLVTDIGLEA 244
Query: 248 FSKIGSLKVLNLG--FNEITDECLVHLKGLTNLESLNLDSCG--IGDEGLVNLTGLCNLK 303
++ +L L+LG + DE E + D I +G L +L
Sbjct: 245 LARSRTLTSLDLGNLVSATYDEA----------EQADFDRTANDITVKGTRALVQSPSLT 294
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L + G +G+ L+ L +N++FT + S R LA L SLN+
Sbjct: 295 SLSVQGNLCGDAGVLELAKSRTLTHLNVAFTNMGPVSARALARNPVLTSLNV 346
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT-----DECLVHLKGLTNLESLNLDS 285
+Y NL L + K +L+L +E T + + +L L LESLN+
Sbjct: 104 YYPNLESVHLKGNFTLADLKALPATLLHLDLSECTGSARSSKAIAYLASLP-LESLNVKG 162
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
IGD G L +LK L ++ +G++G +L+ L S++L+ I D ++ LA
Sbjct: 163 AQIGDHGARLLAANPSLKTLNMAIGGIGAAGAANLAESRTLMSLDLTQNKIGDKGVQALA 222
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
SL +L + +TD GL AL LT LDL
Sbjct: 223 ASRSLTNLTVSNCLVTDIGLEALARSRTLTSLDL 256
>gi|48096980|ref|XP_393659.1| PREDICTED: f-box/LRR-repeat protein 14 [Apis mellifera]
gi|380017700|ref|XP_003692785.1| PREDICTED: F-box/LRR-repeat protein 14-like [Apis florea]
Length = 481
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 170/319 (53%), Gaps = 44/319 (13%)
Query: 59 LLSVDLSG-SDVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFR 114
L +++LSG ++TD+GLI+ ++ + L L+ + C Q+SD L + + L NL L
Sbjct: 179 LEALNLSGCYNITDAGLINAFCQEYTTLTELNLSLCKQVSDISLGRIVQYLKNLEHLELG 238
Query: 115 RNNAITAQGMKAFA-GLINLVKLDLERCTRIHG-GLVNLKGL--------MKLESLNIKW 164
IT G+ A L L +LDL C ++ G+ +L G+ + LE L+++
Sbjct: 239 GCCNITNGGLLCIAWNLKKLKRLDLRSCWQVSDLGIAHLAGVNREAAGGNLALEHLSLQD 298
Query: 165 CNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
C ++D ++ +S GLT LKS+ +S C +TDSG+ +L + L LNL C D
Sbjct: 299 CQRLSDEALRHVSIGLTTLKSINLSFCVCITDSGLKHLAKMSSLRELNLRSC-------D 351
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLES 280
++S +G + L++ G S+I SL V F ++I D+ LVH+ +GL NL+
Sbjct: 352 NVSDIGMAY--------LAEGG----SRISSLDV---SFCDKIGDQALVHISQGLFNLKL 396
Query: 281 LNLDSCGIGDEGLVNLTG-LCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGI 336
L+L +C I DEG+ + L +L+ L + +++ GL ++ + +L+ I+L T I
Sbjct: 397 LSLSACQISDEGICKIAKTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCIDLYGCTRI 456
Query: 337 SDGSLRKLAGLSSLKSLNL 355
S L ++ L L +LNL
Sbjct: 457 STNGLERIMKLPQLSTLNL 475
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 120/247 (48%), Gaps = 39/247 (15%)
Query: 28 FRDC-ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD---VTDSGLIHLK-DCSN 82
R C + DL + GVN + + G +L LS D ++D L H+ +
Sbjct: 263 LRSCWQVSDLGIAHLAGVNRE------AAGGNLALEHLSLQDCQRLSDEALRHVSIGLTT 316
Query: 83 LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT 142
L+S++ +FC+ I+D GL+HL +S+L L+ R + ++ GM A
Sbjct: 317 LKSINLSFCVCITDSGLKHLAKMSSLRELNLRSCDNVSDIGMAYLA-------------- 362
Query: 143 RIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQISCSKVTDSGIAYL- 200
+G ++ SL++ +C+ I D + +S GL NLK L +S +++D GI +
Sbjct: 363 ---------EGGSRISSLDVSFCDKIGDQALVHISQGLFNLKLLSLSACQISDEGICKIA 413
Query: 201 KGLQKLTLLNLEGCP-VTAACLDSLS-ALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVL 257
K L L LN+ C +T L +++ ++ L ++L C ++S +G E+ K+ L L
Sbjct: 414 KTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCIDLYGCTRISTNGLERIMKLPQLSTL 473
Query: 258 NLGFNEI 264
NLG +
Sbjct: 474 NLGLWHV 480
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 96/199 (48%), Gaps = 43/199 (21%)
Query: 272 LKGLTNLESLNLDSC-GIGDEGLVN-----LTGLCNLK---CLELSDTQVGSSGLRHLSG 322
LKG+ NLE+LNL C I D GL+N T L L C ++SD +G R +
Sbjct: 173 LKGVPNLEALNLSGCYNITDAGLINAFCQEYTTLTELNLSLCKQVSDISLG----RIVQY 228
Query: 323 LTNLESINLS-FTGISDGSLRKLA-GLSSLKSLNLDA-RQITDTGLAALTSLT------- 372
L NLE + L I++G L +A L LK L+L + Q++D G+A L +
Sbjct: 229 LKNLEHLELGGCCNITNGGLLCIAWNLKKLKRLDLRSCWQVSDLGIAHLAGVNREAAGGN 288
Query: 373 -GLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSR-ITSA 429
L HL L R++D LR + I GLT L S+N+S IT +
Sbjct: 289 LALEHLSLQDCQRLSDEA---------LRHVSI--------GLTTLKSINLSFCVCITDS 331
Query: 430 GLRHLKPLKNLRSLTLESC 448
GL+HL + +LR L L SC
Sbjct: 332 GLKHLAKMSSLRELNLRSC 350
>gi|290983896|ref|XP_002674664.1| predicted protein [Naegleria gruberi]
gi|284088255|gb|EFC41920.1| predicted protein [Naegleria gruberi]
Length = 374
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 138/300 (46%), Gaps = 9/300 (3%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
ITDS ++P+S L L L +S + + + G+ ++ L++LT L + CL ++ +
Sbjct: 68 ITDSIVEPISKLKQLTYLNVSDNSIGNYGVMHISKLEQLTNLVISKNRFGMNCLKYITNM 127
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
L LN+N + + E K+ L LN+ I D+ H+ L +L SL + G
Sbjct: 128 RKLTSLNINGNDIGNIAFEDIIKMKQLTSLNVNNINIGDKGAFHVGKLKHLTSLAIAKNG 187
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
I +EG+ + L + L++ G G +++ + L +N++ I D L+GL
Sbjct: 188 IHEEGVKFINELPQVTDLDIFGISFGPGGAKYIGEMKQLTKLNINSCRIGDEGATYLSGL 247
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGG 407
+ L L++ + I+ G+ + L LT LD+ I G+ Y+ L L I
Sbjct: 248 TKLTKLSISSNSISAIGVKFIRELKLLTFLDISINNIGQQGSQYVSGLDKLAHLSIHRNN 307
Query: 408 LTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES---CKVTANDIKRL 458
L D G + L +L+++ + I+ G + LK L S + C AN + ++
Sbjct: 308 LGDEGARHIGDMKWLTNLDINCNSISDEGALYFSDLKQLTSFDISGNNICDEVANRLIKI 367
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 150/323 (46%), Gaps = 11/323 (3%)
Query: 154 LMK-LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
+MK L L I N + S K L L L SL IS S +TDS + + L++LT LN+
Sbjct: 31 MMKSLTDLRISKINFVEMS--KYLISLDQLISLDISKSLITDSIVEPISKLKQLTYLNVS 88
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
+ + +S L L L +++ + + + + + L LN+ N+I + +
Sbjct: 89 DNSIGNYGVMHISKLEQLTNLVISKNRFGMNCLKYITNMRKLTSLNINGNDIGNIAFEDI 148
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
+ L SLN+++ IGD+G ++ L +L L ++ + G++ ++ L + +++
Sbjct: 149 IKMKQLTSLNVNNINIGDKGAFHVGKLKHLTSLAIAKNGIHEEGVKFINELPQVTDLDIF 208
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
G + + + L LN+++ +I D G L+ LT LT L + I+ G ++
Sbjct: 209 GISFGPGGAKYIGEMKQLTKLNINSCRIGDEGATYLSGLTKLTKLSISSNSISAIGVKFI 268
Query: 393 RNFKNLRSLEIC------GGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
R K L L+I G +GL L L++ + + G RH+ +K L +L +
Sbjct: 269 RELKLLTFLDISINNIGQQGSQYVSGLDKLAHLSIHRNNLGDEGARHIGDMKWLTNLDIN 328
Query: 447 SCKVTANDIKRLQSRDLPNLVSF 469
++ D L DL L SF
Sbjct: 329 CNSIS--DEGALYFSDLKQLTSF 349
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 3/233 (1%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L S++++G+D+ + + L SL+ N I I D G H+ L +LTSL+ +N
Sbjct: 130 LTSLNINGNDIGNIAFEDIIKMKQLTSLNVN-NINIGDKGAFHVGKLKHLTSLAIAKN-G 187
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
I +G+K L + LD+ + GG + + +L LNI C I D LSG
Sbjct: 188 IHEEGVKFINELPQVTDLDIFGISFGPGGAKYIGEMKQLTKLNINSCR-IGDEGATYLSG 246
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
LT L L IS + ++ G+ +++ L+ LT L++ + +S L L +L+++R
Sbjct: 247 LTKLTKLSISSNSISAIGVKFIRELKLLTFLDISINNIGQQGSQYVSGLDKLAHLSIHRN 306
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
L D+G + L L++ N I+DE ++ L L S ++ I DE
Sbjct: 307 NLGDEGARHIGDMKWLTNLDINCNSISDEGALYFSDLKQLTSFDISGNNICDE 359
>gi|320168649|gb|EFW45548.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 977
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 145/346 (41%), Gaps = 39/346 (11%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
QI+ GLS LT L + N I++ AF GL L ++DL I
Sbjct: 93 QITSISANAFTGLSALTYLVLKENE-ISSISANAFTGLSALKEVDLSNNRIIDLPTAAFA 151
Query: 153 GLMKLESLNIK--WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
GL ++ +L + N I + + +GLT LK L + + ++ A G LT L
Sbjct: 152 GLPQMSTLRLSRNQFNSIPSTAIT--TGLTALKELYLDANNISSISTAAFTGFPALTYLY 209
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
L P+T ++ + L L +L L Q+S F+ + +L L+L N+I+
Sbjct: 210 LADNPITDIPANTFADLTELRHLYLRNNQISSVSATAFAGLSALNYLDLSMNKISSLSAS 269
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
GLT L L L S + + T L L+ L LS Q TNL +
Sbjct: 270 VFTGLTALSILYLQSNQLSSIPASSFTDLAALQHLYLSSNQ-----------FTNLPAA- 317
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
+FT GL +L L L +T +ALTSL+ L +LDL +IT A
Sbjct: 318 -AFT-----------GLDALIVLWLSGNPLTSVPTSALTSLSALRNLDLSSTKITSISAN 365
Query: 391 YLRNFKNLRSL--------EICGGGLTDAGLTGLVSLNVSNSRITS 428
L L I G T GLT L +L++SN+ +T+
Sbjct: 366 AFAGLNALTVLALHYNPIASISGSAFT--GLTALTALHLSNTPLTT 409
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 142/325 (43%), Gaps = 17/325 (5%)
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG 196
+ E T I G+ + + L+S N IT + +GLT L L ++ +++T
Sbjct: 45 NTESLTTIPSGIPSNTTHLSLQS------NQITSISVNAFTGLTALIWLYLTDNQITSIS 98
Query: 197 IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 256
GL LT L L+ +++ ++ + L +L ++L+ ++ D F+ + +
Sbjct: 99 ANAFTGLSALTYLVLKENEISSISANAFTGLSALKEVDLSNNRIIDLPTAAFAGLPQMST 158
Query: 257 LNLG---FNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVG 313
L L FN I + GLT L+ L LD+ I TG L L L+D +
Sbjct: 159 LRLSRNQFNSIPSTAIT--TGLTALKELYLDANNISSISTAAFTGFPALTYLYLADNPIT 216
Query: 314 SSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 373
+ LT L + L IS S AGLS+L L+L +I+ + T LT
Sbjct: 217 DIPANTFADLTELRHLYLRNNQISSVSATAFAGLSALNYLDLSMNKISSLSASVFTGLTA 276
Query: 374 LTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRIT 427
L+ L L +++ A+ + L+ L + T+ GL L+ L +S + +T
Sbjct: 277 LSILYLQSNQLSSIPASSFTDLAALQHLYLSSNQFTNLPAAAFTGLDALIVLWLSGNPLT 336
Query: 428 SAGLRHLKPLKNLRSLTLESCKVTA 452
S L L LR+L L S K+T+
Sbjct: 337 SVPTSALTSLSALRNLDLSSTKITS 361
>gi|290980799|ref|XP_002673119.1| predicted protein [Naegleria gruberi]
gi|284086700|gb|EFC40375.1| predicted protein [Naegleria gruberi]
Length = 426
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 161/380 (42%), Gaps = 26/380 (6%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
S + SG ++ L L FC D +HL L +LT L N I +G K
Sbjct: 43 SKIDPSGFKYICSLEQLTDLYMTFCYFGFDIA-KHLPSLKSLTYL-LITGNYIGVEGAKY 100
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
+ L +L + G + GL +L LNI+ N IT K +S + L L+
Sbjct: 101 IGEMKQLKQLHIANNNIGPEGAKYISGLEQLTFLNIR-ANEITMDGAKFISEMKQLTGLK 159
Query: 187 ISCSKVTDSGIAYLKGLQKLTLLNL-------EGCPVTAACL-------------DSLSA 226
I + + D G ++ G+++LT L++ G + + D +
Sbjct: 160 IVGNNICDEGAKFISGMKQLTNLDIASNNIGENGAKYVSEMMNIRKLDIGFNSINDGVKC 219
Query: 227 LGSLFYL---NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
G + L N+N C + DG + S L L++ N IT +H+ + NL L++
Sbjct: 220 FGEMKQLTDLNVNSCCIGLDGTKYISSFNQLTHLSIAENLITPYGAIHISQMKNLIKLDI 279
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
I D G+ +++ + L L +S + G++++ + NL + ++ I + S +
Sbjct: 280 SDNRIRDNGVQSISEMNQLTELNVSSIDITPIGIQYICKMDNLTYLIIAHNNIGEKSANQ 339
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
++ + L L++ + D G ++ + LT LD+ I D G L K L L
Sbjct: 340 ISEMKHLAQLSIYHNAVGDEGAKFISEMEQLTFLDIGYNEIGDEGVKALSGMKQLTRLNA 399
Query: 404 CGGGLTDAGLTGLVSLNVSN 423
++D G + +N+++
Sbjct: 400 VDNNISDEGEKYIREMNLAD 419
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 137/310 (44%), Gaps = 25/310 (8%)
Query: 94 ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG 153
I G +++ GL LT L+ R N IT G K + + L L + G + G
Sbjct: 117 IGPEGAKYISGLEQLTFLNIRAN-EITMDGAKFISEMKQLTGLKIVGNNICDEGAKFISG 175
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD------------------- 194
+ +L +L+I N I ++ K +S + N++ L I + + D
Sbjct: 176 MKQLTNLDIA-SNNIGENGAKYVSEMMNIRKLDIGFNSINDGVKCFGEMKQLTDLNVNSC 234
Query: 195 ----SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
G Y+ +LT L++ +T +S + +L L+++ ++ D+G + S+
Sbjct: 235 CIGLDGTKYISSFNQLTHLSIAENLITPYGAIHISQMKNLIKLDISDNRIRDNGVQSISE 294
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
+ L LN+ +IT + ++ + NL L + IG++ ++ + +L L +
Sbjct: 295 MNQLTELNVSSIDITPIGIQYICKMDNLTYLIIAHNNIGEKSANQISEMKHLAQLSIYHN 354
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
VG G + +S + L +++ + I D ++ L+G+ L LN I+D G +
Sbjct: 355 AVGDEGAKFISEMEQLTFLDIGYNEIGDEGVKALSGMKQLTRLNAVDNNISDEGEKYIRE 414
Query: 371 LTGLTHLDLF 380
+ H+D++
Sbjct: 415 MNLADHVDIY 424
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 112/268 (41%), Gaps = 54/268 (20%)
Query: 245 CEKFSKIGSLKVLNLGFN---------------EITD----------ECLVHLKGLTNLE 279
CE + LK LN+ FN ++TD + HL L +L
Sbjct: 25 CEILDSMKELKKLNIEFNSKIDPSGFKYICSLEQLTDLYMTFCYFGFDIAKHLPSLKSLT 84
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
L + IG EG + + LK L +++ +G G +++SGL L +N+ I+
Sbjct: 85 YLLITGNYIGVEGAKYIGEMKQLKQLHIANNNIGPEGAKYISGLEQLTFLNIRANEITMD 144
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
+ ++ + L L + I D G ++ + LT+LD+ I ++GA Y+ N+R
Sbjct: 145 GAKFISEMKQLTGLKIVGNNICDEGAKFISGMKQLTNLDIASNNIGENGAKYVSEMMNIR 204
Query: 400 SLEI----------CGG---GLTD-------AGLTG---------LVSLNVSNSRITSAG 430
L+I C G LTD GL G L L+++ + IT G
Sbjct: 205 KLDIGFNSINDGVKCFGEMKQLTDLNVNSCCIGLDGTKYISSFNQLTHLSIAENLITPYG 264
Query: 431 LRHLKPLKNLRSLTLESCKVTANDIKRL 458
H+ +KNL L + ++ N ++ +
Sbjct: 265 AIHISQMKNLIKLDISDNRIRDNGVQSI 292
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 66/167 (39%), Gaps = 16/167 (9%)
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS-LRKLAGLSSLKSLN 354
L + NL+ +E G L + L+ +N+ F D S + + L L L
Sbjct: 8 LENVANLRVIE----NEGGFNCEILDSMKELKKLNIEFNSKIDPSGFKYICSLEQLTDLY 63
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG------GGL 408
+ L SL LT+L + G I GA Y+ K L+ L I G
Sbjct: 64 MTFCYFGFDIAKHLPSLKSLTYLLITGNYIGVEGAKYIGEMKQLKQLHIANNNIGPEGAK 123
Query: 409 TDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 455
+GL L LN+ + IT G + + +K L L K+ N+I
Sbjct: 124 YISGLEQLTFLNIRANEITMDGAKFISEMKQLTGL-----KIVGNNI 165
>gi|167861908|gb|ACA05653.1| InlA [Listeria monocytogenes]
Length = 800
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QITD L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQITD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|219821342|gb|ACL37806.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
LTGL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLTGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|355785801|gb|EHH65984.1| F-box and leucine-rich repeat protein 14 [Macaca fascicularis]
Length = 330
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 167/311 (53%), Gaps = 32/311 (10%)
Query: 81 SNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-LVKLD 137
+N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L L+
Sbjct: 2 ANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVLE 61
Query: 138 LERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LKSLQI 187
L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+ L +
Sbjct: 62 LGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTL 121
Query: 188 S-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDD 243
C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C +SD
Sbjct: 122 QDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDT 181
Query: 244 GCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL----VN 295
G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 182 GIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQ 240
Query: 296 LTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L LK
Sbjct: 241 MHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYG--CTRITKRGLERITQLPCLKV 297
Query: 353 LNLDARQITDT 363
LNL Q+TD+
Sbjct: 298 LNLGLWQMTDS 308
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 165/347 (47%), Gaps = 50/347 (14%)
Query: 154 LMKLESLNIKWCNCITDSDMKP--LSGLTNLKSLQIS-CSKVTDSGIA----YLKGLQKL 206
+ +ESLN+ C +TD+ + + + +L++L +S C ++TDS + YLKGL+
Sbjct: 1 MANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLE-- 58
Query: 207 TLLNLEGCP--VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKI------GSLKVL 257
+L L GC L L L LNL C+ LSD G + + G L +
Sbjct: 59 -VLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 117
Query: 258 NLGFNE---ITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQ 311
L + +TD L H+ +GLT L LNL CG I D GL++L+ + +L+ L L S
Sbjct: 118 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 177
Query: 312 VGSSGLRHLS-GLTNLESINLSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAAL 368
+ +G+ HL+ G L +++SF + D SL +A GL LKSL+L + I+D G+ +
Sbjct: 178 ISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRM 237
Query: 369 T-SLTGLTHLDLFG-ARITDSGAAYL-RNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSR 425
+ GL L++ RITD G + + L +++ G +R
Sbjct: 238 VRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYG-----------------CTR 280
Query: 426 ITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFRPE 472
IT GL + L L+ L L ++T D ++ D L + R
Sbjct: 281 ITKRGLERITQLPCLKVLNLGLWQMT--DSEKEARGDFSPLFTVRTR 325
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 127 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 186
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 187 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 246
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 247 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 283
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 284 RGLERITQLPCLKVLNLGLWQMTD 307
>gi|224124658|ref|XP_002330078.1| predicted protein [Populus trichocarpa]
gi|222871503|gb|EEF08634.1| predicted protein [Populus trichocarpa]
Length = 1228
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 186/393 (47%), Gaps = 30/393 (7%)
Query: 83 LQSLD--FNFCIQISDG-GLEHLRG-LSNLTSLSFRRNNAITAQG-MKAFAGLINLVKLD 137
LQSLD +N + S+ G E L L L L RN +G + F GL L LD
Sbjct: 97 LQSLDLSYNGLVGCSENEGFEVLSSKLRKLEVLDLTRNRFNNDKGILSCFNGLSALKSLD 156
Query: 138 LERCTRIHGGLVNLKG-LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG 196
L GL L L KLE+L++ C DS ++G ++LKSL +S ++VT SG
Sbjct: 157 LSDNQLTGSGLKVLSSRLKKLENLHLSANQC-NDSIFSSITGFSSLKSLDLSYNEVTGSG 215
Query: 197 IAYLKG-LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 255
+ L L++L L+L + SL+ SL LNL+ QL+ K G
Sbjct: 216 LKVLSSRLKRLENLDLSDNQCNDSIFSSLTGFSSLKSLNLSYNQLTGSSMVSIEKNGYYS 275
Query: 256 VLNL--------GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL 307
L + V + GL NLE L+L S + + L +L+G LK L+L
Sbjct: 276 FLQYTKWILPLYPSDNFLSGFQVLVSGLRNLEELHLYSNKLNNNILSSLSGFSTLKSLDL 335
Query: 308 SDTQV-GSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT-GL 365
S + GS+GL+ GL NLE + L F ++ L L+G S+LKSL+L + T + GL
Sbjct: 336 SYNKFTGSTGLK---GLRNLEELYLGFNKFNNSILSSLSGFSTLKSLDLSNNKFTGSIGL 392
Query: 366 AALTSLT--GLTHLDLFGARITDSGAAYLRNFKNLRS----LEICGGGLTDAGLTGLVSL 419
L +L L + D + + +S A L + K L + + G GL+++ + L +
Sbjct: 393 KGLRNLETLNLEYTDFKESILIESLGA-LPSLKTLYASYSKFKHFGKGLSNS--SSLEEV 449
Query: 420 NVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
+ S + ++ LR++ L L+ L+L ++
Sbjct: 450 FLYYSYLPASFLRNIGHLSTLKVLSLAGVDFSS 482
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 167/361 (46%), Gaps = 52/361 (14%)
Query: 57 SSLLSVDLSGSDVTDSGLI----HLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLS 112
S+L S+DLS + +T SGL LK NL L N C +D + G S+L SL
Sbjct: 150 SALKSLDLSDNQLTGSGLKVLSSRLKKLENLH-LSANQC---NDSIFSSITGFSSLKSLD 205
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
N +T G+K + L +LE+L++ C DS
Sbjct: 206 LSY-NEVTGSGLKVLS-----------------------SRLKRLENLDLSDNQC-NDSI 240
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL-------- 224
L+G ++LKSL +S +++T S + ++ + L + D+
Sbjct: 241 FSSLTGFSSLKSLNLSYNQLTGSSMVSIEKNGYYSFLQYTKWILPLYPSDNFLSGFQVLV 300
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
S L +L L+L +L+++ S +LK L+L +N+ T LKGL NLE L L
Sbjct: 301 SGLRNLEELHLYSNKLNNNILSSLSGFSTLKSLDLSYNKFTGS--TGLKGLRNLEELYLG 358
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQV-GSSGLRHLSGLTNLESINLSFTGISDGSL-R 342
+ L +L+G LK L+LS+ + GS GL+ GL NLE++NL +T + L
Sbjct: 359 FNKFNNSILSSLSGFSTLKSLDLSNNKFTGSIGLK---GLRNLETLNLEYTDFKESILIE 415
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
L L SLK+L + G L++ + L + L+ + + A++LRN +L +L+
Sbjct: 416 SLGALPSLKTLYASYSKFKHFG-KGLSNSSSLEEVFLYYSYLP---ASFLRNIGHLSTLK 471
Query: 403 I 403
+
Sbjct: 472 V 472
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 151/333 (45%), Gaps = 41/333 (12%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKD-CSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
SSL S+DLS ++VT SGL L L++LD + Q +D L G S+L SL+
Sbjct: 199 SSLKSLDLSYNEVTGSGLKVLSSRLKRLENLDLS-DNQCNDSIFSSLTGFSSLKSLNLSY 257
Query: 116 NN-------AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCI 168
N +I G +F + + G V + GL LE L++ + N +
Sbjct: 258 NQLTGSSMVSIEKNGYYSFLQYTKWILPLYPSDNFLSGFQVLVSGLRNLEELHL-YSNKL 316
Query: 169 TDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG 228
++ + LSG + LKSL +S +K T G LKGL+ L L L + L SLS
Sbjct: 317 NNNILSSLSGFSTLKSLDLSYNKFT--GSTGLKGLRNLEELYLGFNKFNNSILSSLSGF- 373
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
+LK L+L N+ T + LKGL NLE+LNL+
Sbjct: 374 -----------------------STLKSLDLSNNKFTGS--IGLKGLRNLETLNLEYTDF 408
Query: 289 GDEGLV-NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
+ L+ +L L +LK L S ++ G + LS ++LE + L ++ + LR + L
Sbjct: 409 KESILIESLGALPSLKTLYASYSKFKHFG-KGLSNSSSLEEVFLYYSYLPASFLRNIGHL 467
Query: 348 SSLKSLNLDARQITDTGLA-ALTSLTGLTHLDL 379
S+LK L+L + T A L L HL L
Sbjct: 468 STLKVLSLAGVDFSSTLPAEGWCELKNLEHLFL 500
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 8/149 (5%)
Query: 49 MDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNL 108
V+ S +L + L + + ++ L L S L+SLD ++ GL+ LR L L
Sbjct: 296 FQVLVSGLRNLEELHLYSNKLNNNILSSLSGFSTLKSLDLSYNKFTGSTGLKGLRNLEEL 355
Query: 109 TSLSFRR-NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNC 167
L F + NN+I + + +G L LDL G + LKGL LE+LN+++ +
Sbjct: 356 Y-LGFNKFNNSI----LSSLSGFSTLKSLDLS--NNKFTGSIGLKGLRNLETLNLEYTDF 408
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSG 196
++ L L +LK+L S SK G
Sbjct: 409 KESILIESLGALPSLKTLYASYSKFKHFG 437
>gi|290980538|ref|XP_002672989.1| predicted protein [Naegleria gruberi]
gi|284086569|gb|EFC40245.1| predicted protein [Naegleria gruberi]
Length = 315
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 94/186 (50%)
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
+S + L LN+ ++ D G + +++ L LN+G N I + + + L SL+
Sbjct: 125 ISEMKQLTSLNIYNNRIGDVGAKYINEMKQLTSLNIGGNRIGIKGAKLISEMKQLTSLHT 184
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
+ IGDEG ++ + L L++ Q+G G + +SG+ L S+++ I D +
Sbjct: 185 YNNRIGDEGAKYISEMKQLTSLDIGGNQIGDEGAKLISGMKRLTSLHIYNNRIGDEGAKL 244
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
++G+ L SLN+ +I D G ++ + LT L ++ RI D GA Y+ K L SL I
Sbjct: 245 ISGMKQLTSLNIGVNEIGDEGAKLISGMKRLTSLQIYNNRIGDEGAKYISEMKQLTSLNI 304
Query: 404 CGGGLT 409
G L
Sbjct: 305 GGNELV 310
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 106/204 (51%), Gaps = 2/204 (0%)
Query: 160 LNIKWCNCITDSDMKP--LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
+N+K+ + + DS + +S + L SL I +++ D G Y+ +++LT LN+ G +
Sbjct: 107 VNVKFSSWLLDSFERAEFISEMKQLTSLNIYNNRIGDVGAKYINEMKQLTSLNIGGNRIG 166
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 277
+S + L L+ ++ D+G + S++ L L++G N+I DE + G+
Sbjct: 167 IKGAKLISEMKQLTSLHTYNNRIGDEGAKYISEMKQLTSLDIGGNQIGDEGAKLISGMKR 226
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
L SL++ + IGDEG ++G+ L L + ++G G + +SG+ L S+ + I
Sbjct: 227 LTSLHIYNNRIGDEGAKLISGMKQLTSLNIGVNEIGDEGAKLISGMKRLTSLQIYNNRIG 286
Query: 338 DGSLRKLAGLSSLKSLNLDARQIT 361
D + ++ + L SLN+ ++
Sbjct: 287 DEGAKYISEMKQLTSLNIGGNELV 310
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
S + E S++ L LN+ N I D ++ + L SLN+ IG +G ++ +
Sbjct: 118 SFERAEFISEMKQLTSLNIYNNRIGDVGAKYINEMKQLTSLNIGGNRIGIKGAKLISEMK 177
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
L L + ++G G +++S + L S+++ I D + ++G+ L SL++ +I
Sbjct: 178 QLTSLHTYNNRIGDEGAKYISEMKQLTSLDIGGNQIGDEGAKLISGMKRLTSLHIYNNRI 237
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLN 420
D G ++ + LT L++ I D GA + +G+ L SL
Sbjct: 238 GDEGAKLISGMKQLTSLNIGVNEIGDEGAKLI------------------SGMKRLTSLQ 279
Query: 421 VSNSRITSAGLRHLKPLKNLRSLTL 445
+ N+RI G +++ +K L SL +
Sbjct: 280 IYNNRIGDEGAKYISEMKQLTSLNI 304
>gi|157118403|ref|XP_001659098.1| F-Box protein, putative [Aedes aegypti]
gi|108875753|gb|EAT39978.1| AAEL008262-PA, partial [Aedes aegypti]
Length = 381
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 142/271 (52%), Gaps = 43/271 (15%)
Query: 152 KGLMKLESLNIKWCNCITDSDMKPL--SGLTNLKSLQIS-CSKVTDSGIAYL-KGLQKLT 207
+G+ K++ L C ITD + + + L NL++L +S C +VTDS + + + L+ +
Sbjct: 132 RGIKKVQILG---CYNITDISLGYVFSTDLLNLRTLDLSLCKQVTDSSLGRIAQHLKNVE 188
Query: 208 LLNLEGCP--VTAACLDSLSALG--SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF 261
+L L GC A L +A G +L YL L CQ LSD+ ++ + SLK +NL F
Sbjct: 189 ILELGGCSNITNTAGLSKETADGTPALEYLGLQDCQRLSDEALRHIAQGLTSLKSINLSF 248
Query: 262 -NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
+TD L HL +T LE LNL +C I D G+ LT
Sbjct: 249 CVSVTDSGLKHLAKMTKLEELNLRACDNISDIGMAYLT---------------------- 286
Query: 320 LSGLTNLESINLSF-TGISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTH 376
G + + S+++SF I+D +L ++ GL LKSL+L A QITD GLA + SL L
Sbjct: 287 -EGGSAIISLDVSFCDKIADQALTHISQGLFHLKSLSLSACQITDEGLAKIAKSLHDLET 345
Query: 377 LDLFG-ARITDSGAAYLRN-FKNLRSLEICG 405
L++ AR+TD G YL + NLR++++ G
Sbjct: 346 LNIGQCARVTDKGLEYLADELNNLRAIDLYG 376
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 123/235 (52%), Gaps = 29/235 (12%)
Query: 73 GLIHLKDCSNLQSLDFNFCIQISDGGL----EHLR--------GLSNLTSLSFRRNNAIT 120
G + D NL++LD + C Q++D L +HL+ G SN+T+ + T
Sbjct: 151 GYVFSTDLLNLRTLDLSLCKQVTDSSLGRIAQHLKNVEILELGGCSNITNTAGLSKE--T 208
Query: 121 AQGMKA--FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
A G A + GL + +L E I GL +LK S+N+ +C +TDS +K L+
Sbjct: 209 ADGTPALEYLGLQDCQRLSDEALRHIAQGLTSLK------SINLSFCVSVTDSGLKHLAK 262
Query: 179 LTNLKSLQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLS-ALGSLFYLN 234
+T L+ L + +C ++D G+AYL +G + L++ C + L +S L L L+
Sbjct: 263 MTKLEELNLRACDNISDIGMAYLTEGGSAIISLDVSFCDKIADQALTHISQGLFHLKSLS 322
Query: 235 LNRCQLSDDGCEKFSK-IGSLKVLNLGF-NEITDECLVHLKG-LTNLESLNLDSC 286
L+ CQ++D+G K +K + L+ LN+G +TD+ L +L L NL +++L C
Sbjct: 323 LSACQITDEGLAKIAKSLHDLETLNIGQCARVTDKGLEYLADELNNLRAIDLYGC 377
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 85/152 (55%), Gaps = 6/152 (3%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
++D L H+ + ++L+S++ +FC+ ++D GL+HL ++ L L+ R + I+ GM
Sbjct: 226 LSDEALRHIAQGLTSLKSINLSFCVSVTDSGLKHLAKMTKLEELNLRACDNISDIGMAYL 285
Query: 128 A-GLINLVKLDLERCTRI-HGGLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
G ++ LD+ C +I L ++ +GL L+SL++ C + K L +L++
Sbjct: 286 TEGGSAIISLDVSFCDKIADQALTHISQGLFHLKSLSLSACQITDEGLAKIAKSLHDLET 345
Query: 185 LQI-SCSKVTDSGIAYLKG-LQKLTLLNLEGC 214
L I C++VTD G+ YL L L ++L GC
Sbjct: 346 LNIGQCARVTDKGLEYLADELNNLRAIDLYGC 377
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 66/116 (56%), Gaps = 5/116 (4%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD-VTDSGLIHL-KDCSNLQSLDFNF 90
L++L L ++D M + GS+++S+D+S D + D L H+ + +L+SL +
Sbjct: 266 LEELNLRACDNISDIGMAYLTEGGSAIISLDVSFCDKIADQALTHISQGLFHLKSLSLSA 325
Query: 91 CIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAG-LINLVKLDLERCTRI 144
C QI+D GL + + L +L +L+ + +T +G++ A L NL +DL CTR+
Sbjct: 326 C-QITDEGLAKIAKSLHDLETLNIGQCARVTDKGLEYLADELNNLRAIDLYGCTRL 380
>gi|307215039|gb|EFN89866.1| F-box/LRR-repeat protein 14 [Harpegnathos saltator]
Length = 457
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 142/287 (49%), Gaps = 41/287 (14%)
Query: 68 DVTDSGLIHLKDC-SNLQSLDFNFCIQISDGGLEHLR-GLSNLTSLSFRRNNAITAQGMK 125
VTD+ L + NL+ L+ C I++ GL + GL L L R ++ QG+
Sbjct: 193 QVTDTSLGRIAQYLKNLEHLELGGCCNITNTGLMVIAWGLKKLKRLDLRSCWHVSDQGIA 252
Query: 126 AFAGL-------INLVKLDLERCTRIHG-GLVNLK-GLMKLESLNIKWCNCITDSDMKPL 176
AGL + L L L+ C R+ L N+ GL L+S+N+ +C CITDS +K L
Sbjct: 253 YLAGLNREADGNLALEHLSLQDCQRLSDEALRNVSLGLTTLKSINLSFCVCITDSGVKHL 312
Query: 177 SGLTNLKSLQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTA--ACLDSLSALGSLFY 232
+ +++L+ L + SC ++D G+AYL +G ++T L++ C A + L +L
Sbjct: 313 ARMSSLRELNLRSCDNISDIGMAYLAEGGSRITSLDVSFCDKIGDQALVHISQGLFNLKS 372
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG-IGDE 291
L+L+ CQ+SD+G K +K L +LE+LN+ C + D
Sbjct: 373 LSLSACQISDEGICKIAKT-----------------------LHDLETLNIGQCSRLTDR 409
Query: 292 GLVNLT-GLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFTGI 336
L + + +LKC++L T++ +SGL + L L ++NL +
Sbjct: 410 SLHTMAENMKHLKCIDLYGCTKITTSGLERIMKLPQLSTLNLGLWHV 456
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 161/333 (48%), Gaps = 53/333 (15%)
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG--- 178
Q FA L+ ++ + HG L+G+ LE+LN+ C ITD+ + +SG
Sbjct: 121 QAPALFASLVRRGVKKVQVLSLRHGLSAVLRGVPNLEALNLSGCYNITDTGI--MSGFCQ 178
Query: 179 -LTNLKSLQIS-CSKVTDSGIA----YLK-----------------------GLQKLTLL 209
L L L +S C +VTD+ + YLK GL+KL L
Sbjct: 179 ELPTLTVLNLSLCKQVTDTSLGRIAQYLKNLEHLELGGCCNITNTGLMVIAWGLKKLKRL 238
Query: 210 NLEGC-PVTAACLDSLSALG-------SLFYLNLNRCQ-LSDDGCEKFS-KIGSLKVLNL 259
+L C V+ + L+ L +L +L+L CQ LSD+ S + +LK +NL
Sbjct: 239 DLRSCWHVSDQGIAYLAGLNREADGNLALEHLSLQDCQRLSDEALRNVSLGLTTLKSINL 298
Query: 260 GFNE-ITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSDT-QVGSS 315
F ITD + HL +++L LNL SC I D G+ L G + L++S ++G
Sbjct: 299 SFCVCITDSGVKHLARMSSLRELNLRSCDNISDIGMAYLAEGGSRITSLDVSFCDKIGDQ 358
Query: 316 GLRHLS-GLTNLESINLSFTGISDGSLRKLAG-LSSLKSLNL-DARQITDTGLAALT-SL 371
L H+S GL NL+S++LS ISD + K+A L L++LN+ ++TD L + ++
Sbjct: 359 ALVHISQGLFNLKSLSLSACQISDEGICKIAKTLHDLETLNIGQCSRLTDRSLHTMAENM 418
Query: 372 TGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEI 403
L +DL+G +IT SG + L +L +
Sbjct: 419 KHLKCIDLYGCTKITTSGLERIMKLPQLSTLNL 451
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 138/293 (47%), Gaps = 64/293 (21%)
Query: 176 LSGLTNLKSLQIS-CSKVTDSGI--AYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLF 231
L G+ NL++L +S C +TD+GI + + L LT+LNL C VT L ++ +
Sbjct: 150 LRGVPNLEALNLSGCYNITDTGIMSGFCQELPTLTVLNLSLCKQVTDTSLGRIAQ----Y 205
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG-IGD 290
NL +L G + N G +V GL L+ L+L SC + D
Sbjct: 206 LKNLEHLELG----------GCCNITNTGL-------MVIAWGLKKLKRLDLRSCWHVSD 248
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA-GLSS 349
+G+ L GL + G+ L HLS L + + + SD +LR ++ GL++
Sbjct: 249 QGIAYLAGL--------NREADGNLALEHLS-LQDCQRL-------SDEALRNVSLGLTT 292
Query: 350 LKSLNLD-ARQITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICGGG 407
LKS+NL ITD+G+ L ++ L L+L I+D G AYL
Sbjct: 293 LKSINLSFCVCITDSGVKHLARMSSLRELNLRSCDNISDIGMAYLAE------------- 339
Query: 408 LTDAGLTGLVSLNVSN-SRITSAGLRHL-KPLKNLRSLTLESCKVTANDIKRL 458
G + + SL+VS +I L H+ + L NL+SL+L +C+++ I ++
Sbjct: 340 ----GGSRITSLDVSFCDKIGDQALVHISQGLFNLKSLSLSACQISDEGICKI 388
>gi|383852952|ref|XP_003701989.1| PREDICTED: F-box/LRR-repeat protein 14-like [Megachile rotundata]
Length = 479
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 141/279 (50%), Gaps = 50/279 (17%)
Query: 68 DVTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
++T++GL+ + + L+ LD C Q+SD G+ HL G++ +A
Sbjct: 240 NITNTGLLCIAWNLKKLKRLDLRSCWQVSDLGIAHLAGVNR-----------------EA 282
Query: 127 FAGLINLVKLDLERCTRIHG-GLVNLK-GLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
G L L L+ C R+ L ++ GL L+S+N+ +C CITDS +K L+ +++L+
Sbjct: 283 AGGNFALEHLSLQDCQRLSDEALRHISIGLTTLKSINLSFCVCITDSGVKHLAKMSSLRE 342
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTA--ACLDSLSALGSLFYLNLNRCQL 240
L + SC ++D G+AYL +G +++ L++ C A + L +L L+L+ CQ+
Sbjct: 343 LNLRSCDNISDIGMAYLAEGGSRISSLDVSFCDKIGDQALVHISQGLFNLKSLSLSACQI 402
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLT-G 298
SD+G K +K L +LE+LN+ C + D+GL +
Sbjct: 403 SDEGICKIAKT-----------------------LHDLETLNIGQCSRLTDKGLYTIAES 439
Query: 299 LCNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFTGI 336
+ +LKC++L T++ ++GL + L L ++NL +
Sbjct: 440 MKHLKCIDLYGCTRISTNGLERIMKLPQLSTLNLGLWHV 478
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 158/325 (48%), Gaps = 68/325 (20%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGL------EH----------------------LRGLSNL 108
L+ NL++L+ + C I+D GL E+ ++ L NL
Sbjct: 171 LRGVPNLEALNLSGCYNITDAGLINAFCQEYSTLTELNLSLCKQVSDISLGRIVQYLKNL 230
Query: 109 TSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRIHG-GLVNLKGL--------MKLE 158
L IT G+ A L L +LDL C ++ G+ +L G+ LE
Sbjct: 231 EHLELGGCCNITNTGLLCIAWNLKKLKRLDLRSCWQVSDLGIAHLAGVNREAAGGNFALE 290
Query: 159 SLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPV 216
L+++ C ++D ++ +S GLT LKS+ +S C +TDSG+ +L + L LNL C
Sbjct: 291 HLSLQDCQRLSDEALRHISIGLTTLKSINLSFCVCITDSGVKHLAKMSSLRELNLRSC-- 348
Query: 217 TAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KG 274
D++S +G + L++ G S+I SL V F ++I D+ LVH+ +G
Sbjct: 349 -----DNISDIGMAY--------LAEGG----SRISSLDV---SFCDKIGDQALVHISQG 388
Query: 275 LTNLESLNLDSCGIGDEGLVNLTG-LCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL 331
L NL+SL+L +C I DEG+ + L +L+ L + +++ GL ++ + +L+ I+L
Sbjct: 389 LFNLKSLSLSACQISDEGICKIAKTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCIDL 448
Query: 332 -SFTGISDGSLRKLAGLSSLKSLNL 355
T IS L ++ L L +LNL
Sbjct: 449 YGCTRISTNGLERIMKLPQLSTLNL 473
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 172/369 (46%), Gaps = 74/369 (20%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNL--KGLMKLES 159
RG+ + LS RR G+ NL L+L C I GL+N + L
Sbjct: 153 RGVKRVQVLSLRRGLG------DVLRGVPNLEALNLSGCYNITDAGLINAFCQEYSTLTE 206
Query: 160 LNIKWCNCITDSDM-KPLSGLTNLKSLQIS-CSKVTDSG---IAYLKGLQKLTLLNLEGC 214
LN+ C ++D + + + L NL+ L++ C +T++G IA+ L+KL L+L C
Sbjct: 207 LNLSLCKQVSDISLGRIVQYLKNLEHLELGGCCNITNTGLLCIAW--NLKKLKRLDLRSC 264
Query: 215 PVTA-------ACLDSLSALG--SLFYLNLNRCQ-LSDDGCEKFS-KIGSLKVLNLGFNE 263
+ A ++ +A G +L +L+L CQ LSD+ S + +LK +NL F
Sbjct: 265 WQVSDLGIAHLAGVNREAAGGNFALEHLSLQDCQRLSDEALRHISIGLTTLKSINLSFCV 324
Query: 264 -ITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS 321
ITD + HL +++L LNL SC I D G+ L
Sbjct: 325 CITDSGVKHLAKMSSLRELNLRSCDNISDIGMAYLA-----------------------E 361
Query: 322 GLTNLESINLSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLD 378
G + + S+++SF I D +L ++ GL +LKSL+L A QI+D G+ + +L L L+
Sbjct: 362 GGSRISSLDVSFCDKIGDQALVHISQGLFNLKSLSLSACQISDEGICKIAKTLHDLETLN 421
Query: 379 LFG-ARITDSGAAYL-RNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKP 436
+ +R+TD G + + K+L+ +++ G +RI++ GL +
Sbjct: 422 IGQCSRLTDKGLYTIAESMKHLKCIDLYGC-----------------TRISTNGLERIMK 464
Query: 437 LKNLRSLTL 445
L L +L L
Sbjct: 465 LPQLSTLNL 473
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 95/199 (47%), Gaps = 43/199 (21%)
Query: 272 LKGLTNLESLNLDSC-GIGDEGLVN--------LTGLCNLKCLELSDTQVGSSGLRHLSG 322
L+G+ NLE+LNL C I D GL+N LT L C ++SD +G R +
Sbjct: 171 LRGVPNLEALNLSGCYNITDAGLINAFCQEYSTLTELNLSLCKQVSDISLG----RIVQY 226
Query: 323 LTNLESINLS-FTGISDGSLRKLA-GLSSLKSLNLDA-RQITDTGLAALTSLT------- 372
L NLE + L I++ L +A L LK L+L + Q++D G+A L +
Sbjct: 227 LKNLEHLELGGCCNITNTGLLCIAWNLKKLKRLDLRSCWQVSDLGIAHLAGVNREAAGGN 286
Query: 373 -GLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSR-ITSA 429
L HL L R++D LR + I GLT L S+N+S IT +
Sbjct: 287 FALEHLSLQDCQRLSDEA---------LRHISI--------GLTTLKSINLSFCVCITDS 329
Query: 430 GLRHLKPLKNLRSLTLESC 448
G++HL + +LR L L SC
Sbjct: 330 GVKHLAKMSSLRELNLRSC 348
>gi|71912406|gb|AAZ53235.1| InlA [Listeria monocytogenes]
Length = 800
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTSLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLASLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|168703296|ref|ZP_02735573.1| hypothetical protein GobsU_27441 [Gemmata obscuriglobus UQM 2246]
Length = 635
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 24/247 (9%)
Query: 169 TDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG 228
TD +++ + + ++ ++I+ VT +G+ +L L KL L ++ CPV + + L+A
Sbjct: 228 TDDELRVFTSIREVEHVRIANGDVTTAGLYHLPRLSKLKTLEIDSCPVDS--IAPLTACP 285
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
+L L + ++ G E+ + V+N D L+ LTNL L LD C I
Sbjct: 286 NLTELVIT----AEAGTERRA------VVN-------DTGTAGLEKLTNLRRLKLDWCEI 328
Query: 289 GDEGLVNLTGLCNLKCLEL---SDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
G + L L L L+ LEL + + L L+GL LE + L I +L +
Sbjct: 329 GGQTLRRLAALHRLRSLELMLFWGQHISGTDLAELTGLLELEKLTLH--PIPPWALEYIG 386
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
L +L++L L D+ L LT L L L G +TD +LR ++LR+L I
Sbjct: 387 PLRTLRTLTLSLFGEGDSEFRHLAQLTNLCWLKLTGPAVTDCALGHLRTLRSLRTLHISE 446
Query: 406 GGLTDAG 412
+T G
Sbjct: 447 SAVTATG 453
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 20/229 (8%)
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
+DD F+ I ++ + + ++T L HL L+ L++L +DSC + + + LT
Sbjct: 228 TDDELRVFTSIREVEHVRIANGDVTTAGLYHLPRLSKLKTLEIDSCPV--DSIAPLTACP 285
Query: 301 NLKCLELSDTQ-------VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
NL L ++ V +G L LTNL + L + I +LR+LA L L+SL
Sbjct: 286 NLTELVITAEAGTERRAVVNDTGTAGLEKLTNLRRLKLDWCEIGGQTLRRLAALHRLRSL 345
Query: 354 NL---DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
L + I+ T LA LT L L L L I Y+ + LR+L + G D
Sbjct: 346 ELMLFWGQHISGTDLAELTGLLELEKLTLHP--IPPWALEYIGPLRTLRTLTLSLFGEGD 403
Query: 411 ------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAN 453
A LT L L ++ +T L HL+ L++LR+L + VTA
Sbjct: 404 SEFRHLAQLTNLCWLKLTGPAVTDCALGHLRTLRSLRTLHISESAVTAT 452
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 28/257 (10%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
V ++ DVT +GL HL S L++L+ + C S + L NLT L ITA
Sbjct: 244 VRIANGDVTTAGLYHLPRLSKLKTLEIDSCPVDS---IAPLTACPNLTEL------VITA 294
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
+ ++N G L+ L L L + WC I ++ L+ L
Sbjct: 295 EAGTERRAVVN------------DTGTAGLEKLTNLRRLKLDWCE-IGGQTLRRLAALHR 341
Query: 182 LKSLQISC---SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
L+SL++ ++ + +A L GL +L L L P+ L+ + L +L L L+
Sbjct: 342 LRSLELMLFWGQHISGTDLAELTGLLELEKLTLH--PIPPWALEYIGPLRTLRTLTLSLF 399
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
D +++ +L L L +TD L HL+ L +L +L++ + G + L
Sbjct: 400 GEGDSEFRHLAQLTNLCWLKLTGPAVTDCALGHLRTLRSLRTLHISESAVTATGALTLAH 459
Query: 299 LCNLKCLELSDTQVGSS 315
+ +SDT V S
Sbjct: 460 QLPAAKI-ISDTVVAWS 475
>gi|290989200|ref|XP_002677229.1| predicted protein [Naegleria gruberi]
gi|284090835|gb|EFC44485.1| predicted protein [Naegleria gruberi]
Length = 308
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 118/247 (47%)
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
D K + L +L IS + + Y+ L KL LN+ G +T LS L L
Sbjct: 57 DCKIFEWMKQLTNLSISYNNMNVENTKYIGQLDKLINLNINGNAITHEGAKYLSELEQLN 116
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
L+++ C++ +G + S++ L LN+G N I E + H+ GL+ L L++ + IG+E
Sbjct: 117 TLHIDNCEIGVEGAKYLSEMKHLTNLNIGSNRIGVEGVKHIIGLSKLTFLDISNNKIGEE 176
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
G L + L L++S + G+ ++S + L S++++ I + ++ ++ L
Sbjct: 177 GAKYLREMRQLNNLDVSTNALRQQGIEYISEMKQLTSLSIAVNLIGVEGAKHISEMTQLT 236
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
LN++ I G+ + ++ L HL + G I + G + + + L L I +
Sbjct: 237 KLNMNCCNIGVEGVKHIINMKQLKHLIISGNNIGNKGCELILDLEQLTFLNIENNNIDVE 296
Query: 412 GLTGLVS 418
G+ + S
Sbjct: 297 GIAYIAS 303
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 6/207 (2%)
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
C+ F + L L++ +N + E ++ L L +LN++ I EG L+ L L
Sbjct: 58 CKIFEWMKQLTNLSISYNNMNVENTKYIGQLDKLINLNINGNAITHEGAKYLSELEQLNT 117
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 364
L + + ++G G ++LS + +L ++N+ I ++ + GLS L L++ +I + G
Sbjct: 118 LHIDNCEIGVEGAKYLSEMKHLTNLNIGSNRIGVEGVKHIIGLSKLTFLDISNNKIGEEG 177
Query: 365 LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC------GGGLTDAGLTGLVS 418
L + L +LD+ + G Y+ K L SL I G + +T L
Sbjct: 178 AKYLREMRQLNNLDVSTNALRQQGIEYISEMKQLTSLSIAVNLIGVEGAKHISEMTQLTK 237
Query: 419 LNVSNSRITSAGLRHLKPLKNLRSLTL 445
LN++ I G++H+ +K L+ L +
Sbjct: 238 LNMNCCNIGVEGVKHIINMKQLKHLII 264
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 26/266 (9%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW 164
+ LT+LS NN + + K L L+ L++ H G L L +L +L+I
Sbjct: 64 MKQLTNLSISYNN-MNVENTKYIGQLDKLINLNINGNAITHEGAKYLSELEQLNTLHIDN 122
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
C I K LS + +L +L I +++ G+ ++ GL KLT L++ + L
Sbjct: 123 CE-IGVEGAKYLSEMKHLTNLNIGSNRIGVEGVKHIIGLSKLTFLDISNNKIGEEGAKYL 181
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
+ L L+++ L G E S++ L L++ N I E H+ +T L LN++
Sbjct: 182 REMRQLNNLDVSTNALRQQGIEYISEMKQLTSLSIAVNLIGVEGAKHISEMTQLTKLNMN 241
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
C IG E G++H+ + L+ + +S I + +
Sbjct: 242 CCNIGVE------------------------GVKHIINMKQLKHLIISGNNIGNKGCELI 277
Query: 345 AGLSSLKSLNLDARQITDTGLAALTS 370
L L LN++ I G+A + S
Sbjct: 278 LDLEQLTFLNIENNNIDVEGIAYIAS 303
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 25/213 (11%)
Query: 55 QGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI---------------------- 92
Q L++++++G+ +T G +L + L +L + C
Sbjct: 87 QLDKLINLNINGNAITHEGAKYLSELEQLNTLHIDNCEIGVEGAKYLSEMKHLTNLNIGS 146
Query: 93 -QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL 151
+I G++H+ GLS LT L NN I +G K + L LD+ G+ +
Sbjct: 147 NRIGVEGVKHIIGLSKLTFLDI-SNNKIGEEGAKYLREMRQLNNLDVSTNALRQQGIEYI 205
Query: 152 KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
+ +L SL+I N I K +S +T L L ++C + G+ ++ +++L L +
Sbjct: 206 SEMKQLTSLSIA-VNLIGVEGAKHISEMTQLTKLNMNCCNIGVEGVKHIINMKQLKHLII 264
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
G + + + L L +LN+ + +G
Sbjct: 265 SGNNIGNKGCELILDLEQLTFLNIENNNIDVEG 297
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 19/145 (13%)
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
+ L ++++S+ ++ + + + L L +LN++ IT G L+ L L L +
Sbjct: 64 MKQLTNLSISYNNMNVENTKYIGQLDKLINLNINGNAITHEGAKYLSELEQLNTLHIDNC 123
Query: 383 RITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRS 442
I GA YL K+L +LN+ ++RI G++H+ L L
Sbjct: 124 EIGVEGAKYLSEMKHL------------------TNLNIGSNRIGVEGVKHIIGLSKLTF 165
Query: 443 LTLESCKVTANDIKRLQS-RDLPNL 466
L + + K+ K L+ R L NL
Sbjct: 166 LDISNNKIGEEGAKYLREMRQLNNL 190
>gi|126340111|ref|XP_001366661.1| PREDICTED: f-box/LRR-repeat protein 14-like [Monodelphis domestica]
Length = 400
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 169/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 325 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLP 381
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+T++
Sbjct: 382 CLKVLNLGLWQMTES 396
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 179/371 (48%), Gaps = 54/371 (14%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-K 273
LS +G + R + +GC +G ++ ++TD L H+ +
Sbjct: 180 R-------HLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTDLSLKHISR 225
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESIN 330
GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L ++
Sbjct: 226 GLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLD 285
Query: 331 LSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITD 386
+SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ RITD
Sbjct: 286 VSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITD 345
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
G LE+ L+ LTG+ +RIT GL + L L+ L L
Sbjct: 346 KG------------LELIAEHLSQ--LTGIDLYGC--TRITKRGLERITQLPCLKVLNLG 389
Query: 447 SCKVTANDIKR 457
++T ++ R
Sbjct: 390 LWQMTESEKVR 400
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++T+
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTE 395
>gi|260804809|ref|XP_002597280.1| hypothetical protein BRAFLDRAFT_260896 [Branchiostoma floridae]
gi|229282543|gb|EEN53292.1| hypothetical protein BRAFLDRAFT_260896 [Branchiostoma floridae]
Length = 398
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 166/327 (50%), Gaps = 32/327 (9%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC---TRIHGGLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+V L+L C T I + + L
Sbjct: 69 RGIRKVQILSLRRSLSYVVQGMS------NIVSLNLSGCYNLTDIGLSHAFTQDVPSLTE 122
Query: 160 LNIKWCNCITDSDMKPLSG-LTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGC-P 215
LN+ C ITDS + ++ L NL+ L + C +T++G+ GL KL LNL C
Sbjct: 123 LNLSLCKQITDSSLGRIAQYLKNLERLDLGGCCNITNTGLLLCAWGLLKLRYLNLRSCRH 182
Query: 216 VTAACLDSLSALGS--------LFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-NEI 264
++ + LS + L +L L CQ L+D + SK + LK LNL F I
Sbjct: 183 ISDVGIGHLSGISKNAAEGCLHLEHLCLQDCQKLTDLALKHVSKGLQRLKSLNLSFCCGI 242
Query: 265 TDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRHLS 321
+D +++L +++L+ LNL SC I D G+ +L G + L++S +VG S L H++
Sbjct: 243 SDGGMMYLAKMSSLKELNLRSCDNISDIGIAHLADGSATISHLDVSFCDKVGDSALGHIA 302
Query: 322 -GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALT-SLTGLTHL 377
GL +L S++L ISD L R + + L +L++ +ITD GL + +LT LT++
Sbjct: 303 HGLYHLHSLSLGSCNISDEGLNRMVRSMHELTTLDIGQCYKITDKGLGLIADNLTQLTNI 362
Query: 378 DLFG-ARITDSGAAYLRNFKNLRSLEI 403
DL+G +IT +G + L L +
Sbjct: 363 DLYGCTKITTAGLERIMQLPRLSVLNL 389
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 153/303 (50%), Gaps = 32/303 (10%)
Query: 81 SNLQSLDFNFCIQISDGGLEHL--RGLSNLTSLSFRRNNAITAQGMKAFAGLI-NLVKLD 137
SN+ SL+ + C ++D GL H + + +LT L+ IT + A + NL +LD
Sbjct: 91 SNIVSLNLSGCYNLTDIGLSHAFTQDVPSLTELNLSLCKQITDSSLGRIAQYLKNLERLD 150
Query: 138 LERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT--------NLKSLQI 187
L C I G L+ GL+KL LN++ C I+D + LSG++ +L+ L +
Sbjct: 151 LGGCCNITNTGLLLCAWGLLKLRYLNLRSCRHISDVGIGHLSGISKNAAEGCLHLEHLCL 210
Query: 188 S-CSKVTDSGIAYL-KGLQKLTLLNLEG-CPVTAACLDSLSALGSLFYLNLNRC-QLSDD 243
C K+TD + ++ KGLQ+L LNL C ++ + L+ + SL LNL C +SD
Sbjct: 211 QDCQKLTDLALKHVSKGLQRLKSLNLSFCCGISDGGMMYLAKMSSLKELNLRSCDNISDI 270
Query: 244 GCEKFSK-IGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL------- 293
G + ++ L++ F +++ D L H+ GL +L SL+L SC I DEGL
Sbjct: 271 GIAHLADGSATISHLDVSFCDKVGDSALGHIAHGLYHLHSLSLGSCNISDEGLNRMVRSM 330
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAGLSSLKS 352
LT L +C +++D +G LT L +I+L T I+ L ++ L L
Sbjct: 331 HELTTLDIGQCYKITDKGLGLIA----DNLTQLTNIDLYGCTKITTAGLERIMQLPRLSV 386
Query: 353 LNL 355
LNL
Sbjct: 387 LNL 389
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 160/321 (49%), Gaps = 53/321 (16%)
Query: 176 LSGLTNLKSLQIS-CSKVTDSGI--AYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLF 231
+ G++N+ SL +S C +TD G+ A+ + + LT LNL C +T + L ++ +
Sbjct: 87 VQGMSNIVSLNLSGCYNLTDIGLSHAFTQDVPSLTELNLSLCKQITDSSLGRIAQ----Y 142
Query: 232 YLNLNRCQLSDDGCEKFSKIG---------SLKVLNL-GFNEITDECLVHLKGLTNLESL 281
NL R L GC + G L+ LNL I+D + HL G++ +
Sbjct: 143 LKNLERLDLG--GCCNITNTGLLLCAWGLLKLRYLNLRSCRHISDVGIGHLSGISKNAA- 199
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS-GLTNLESINLSFT-GISDG 339
EG ++L LC C +L+D L+H+S GL L+S+NLSF GISDG
Sbjct: 200 ---------EGCLHLEHLCLQDCQKLTDL-----ALKHVSKGLQRLKSLNLSFCCGISDG 245
Query: 340 SLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTG-LTHLDL-FGARITDSGAAYLRN-F 395
+ LA +SSLK LNL + I+D G+A L + ++HLD+ F ++ DS ++ +
Sbjct: 246 GMMYLAKMSSLKELNLRSCDNISDIGIAHLADGSATISHLDVSFCDKVGDSALGHIAHGL 305
Query: 396 KNLRSLEICGGGLTDAGLTGLV-------SLNVSN-SRITSAGLRHLKP-LKNLRSLTLE 446
+L SL + ++D GL +V +L++ +IT GL + L L ++ L
Sbjct: 306 YHLHSLSLGSCNISDEGLNRMVRSMHELTTLDIGQCYKITDKGLGLIADNLTQLTNIDLY 365
Query: 447 SC-KVTANDIKRLQSRDLPNL 466
C K+T ++R+ LP L
Sbjct: 366 GCTKITTAGLERIM--QLPRL 384
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 7/174 (4%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ K L+SL+ +FC ISDGG+ +L +S+L L+ R + I+ G+
Sbjct: 216 LTDLALKHVSKGLQRLKSLNLSFCCGISDGGMMYLAKMSSLKELNLRSCDNISDIGIAHL 275
Query: 128 A-GLINLVKLDLERCTRIHGGLVN--LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + LD+ C ++ + GL L SL++ CN + + + + L +
Sbjct: 276 ADGSATISHLDVSFCDKVGDSALGHIAHGLYHLHSLSLGSCNISDEGLNRMVRSMHELTT 335
Query: 185 LQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNL 235
L I C K+TD G+ + L +LT ++L GC +T A L+ + L L LNL
Sbjct: 336 LDIGQCYKITDKGLGLIADNLTQLTNIDLYGCTKITTAGLERIMQLPRLSVLNL 389
>gi|255525367|ref|ZP_05392306.1| putative cell wall binding repeat 2-containing protein [Clostridium
carboxidivorans P7]
gi|296187977|ref|ZP_06856369.1| leucine Rich repeat protein [Clostridium carboxidivorans P7]
gi|255510938|gb|EET87239.1| putative cell wall binding repeat 2-containing protein [Clostridium
carboxidivorans P7]
gi|296047103|gb|EFG86545.1| leucine Rich repeat protein [Clostridium carboxidivorans P7]
Length = 660
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 162/319 (50%), Gaps = 45/319 (14%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
+KD S L++L + ++D + L L NLT NL KL
Sbjct: 373 IKDISGLENLTNLQILALTDTEVSDLSPLKNLT----------------------NLQKL 410
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG 196
+L RC ++ + LK L L++LN+ WC + SD+ PL LTNL+ L + +++D+
Sbjct: 411 NL-RCAQV-SDISPLKYLTNLQNLNL-WCAQV--SDISPLKDLTNLQKLDLHIPQISDT- 464
Query: 197 IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD-DGCEKFSKIGSLK 255
+ LK L L L+L+ V + ++ L L +L LNL+R Q+SD G + + + L
Sbjct: 465 -SALKNLTNLQQLSLQYTQV--SHINGLENLTNLQQLNLDRTQVSDISGLKDLTNLQKLN 521
Query: 256 VLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSS 315
+ N + I+ LK LTNL+ L+L S + D + L L NL+ L+L++ QV S
Sbjct: 522 LNNNQVSNIS-----PLKYLTNLQELDLSSNQVSD--ISPLKYLTNLQKLDLNNNQV--S 572
Query: 316 GLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLT 375
+ L LTNL+ + L+ ISD + L L +L+ L L QI+D ++ L L L
Sbjct: 573 DVSPLKYLTNLQDLLLNVNQISD--ISPLKDLINLQGLYLGINQISD--ISPLKYLINLR 628
Query: 376 HLDLFGARITDSGAAYLRN 394
L+L +++D+ L+N
Sbjct: 629 ELNLKHTQVSDADKQSLKN 647
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 179/372 (48%), Gaps = 64/372 (17%)
Query: 116 NNAITAQGM---KAFAGLIN-----LVKLDLERCTRI-------HGGLVNLKGLMKLESL 160
NN +T + KA IN L+K D+ + T + H + ++ GL L +L
Sbjct: 326 NNIVTFKDKNLEKAIRATINKPTGELLKSDVNQITELDVSIINEHTDIKDISGLENLTNL 385
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAA 219
I SD+ PL LTNL+ L + C++V+D S + YL LQ L L C +
Sbjct: 386 QILALTDTEVSDLSPLKNLTNLQKLNLRCAQVSDISPLKYLTNLQNLNLW----C-AQVS 440
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG---LT 276
+ L L +L L+L+ Q+SD K + +L+ L+L + +++ H+ G LT
Sbjct: 441 DISPLKDLTNLQKLDLHIPQISDTSALK--NLTNLQQLSLQYTQVS-----HINGLENLT 493
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS-SGLRHLSGLTNLESINLSFTG 335
NL+ LNLD + D ++GL +L L+ + S + L LTNL+ ++LS
Sbjct: 494 NLQQLNLDRTQVSD-----ISGLKDLTNLQKLNLNNNQVSNISPLKYLTNLQELDLSSNQ 548
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF 395
+SD + L L++L+ L+L+ Q++D ++ L LT L L L +I+D + L++
Sbjct: 549 VSD--ISPLKYLTNLQKLDLNNNQVSD--VSPLKYLTNLQDLLLNVNQISD--ISPLKDL 602
Query: 396 KNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 455
NL+ L + ++D + LK L NLR L L+ +V+ D
Sbjct: 603 INLQGLYLGINQISD--------------------ISPLKYLINLRELNLKHTQVSDADK 642
Query: 456 KRLQSRDLPNLV 467
+ L++ LPN V
Sbjct: 643 QSLKNA-LPNCV 653
>gi|290988772|ref|XP_002677066.1| predicted protein [Naegleria gruberi]
gi|284090672|gb|EFC44322.1| predicted protein [Naegleria gruberi]
Length = 289
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 120/241 (49%), Gaps = 1/241 (0%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N + D+ L +T L +L+I + + D+ + + +++LT L+LE + S+S
Sbjct: 44 NILNDNWFNMLGRMTQLTTLEIGNNLIDDNMVKLISEMKQLTGLDLEINQIFNEGAKSIS 103
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
L +L YLN+ ++D+G E S++ +L L + IT + + L NL LN+
Sbjct: 104 ELRNLTYLNIGNNPINDEGIESISQLDNLTDLTVSSLRITSKSAKFISKLNNLTLLNIAY 163
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT-GISDGSLRKL 344
IGDEG ++ + +LK L++S + G + +S L L + +S I D R +
Sbjct: 164 NNIGDEGAKFISEIKSLKILDISLNGISPIGAKSISELDQLTVLYISQNFSIGDEGARMI 223
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
+ + L L + I + G +++ + LTHLD+ I G + +R+ K+L L I
Sbjct: 224 SEMKQLNELYIQDCFIGNAGAISISRMDKLTHLDISENEIQIEGESVIRDMKHLSYLSIE 283
Query: 405 G 405
G
Sbjct: 284 G 284
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 17/289 (5%)
Query: 44 VNDKWMDVIASQGS-SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
V +W++VI + S+++ + + V + L DC S+ F I ++D L
Sbjct: 2 VTKQWLNVIRDRSELSMMANNHLVNQVNNEFL----DC--FVSITFARNI-LNDNWFNML 54
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
++ LT+L NN I +K + + L LDLE + G ++ L L LNI
Sbjct: 55 GRMTQLTTLEIG-NNLIDDNMVKLISEMKQLTGLDLEINQIFNEGAKSISELRNLTYLNI 113
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
N I D ++ +S L NL L +S ++T ++ L LTLLN+ +
Sbjct: 114 G-NNPINDEGIESISQLDNLTDLTVSSLRITSKSAKFISKLNNLTLLNIAYNNIGDEGAK 172
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN-EITDECLVHLKGLTNLESL 281
+S + SL L+++ +S G + S++ L VL + N I DE + + L L
Sbjct: 173 FISEIKSLKILDISLNGISPIGAKSISELDQLTVLYISQNFSIGDEGARMISEMKQLNEL 232
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG------LRHLSGLT 324
+ C IG+ G ++++ + L L++S+ ++ G ++HLS L+
Sbjct: 233 YIQDCFIGNAGAISISRMDKLTHLDISENEIQIEGESVIRDMKHLSYLS 281
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 7/165 (4%)
Query: 288 IGDEGLVNLTG-LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAG 346
I ++ N+ G + L LE+ + + + ++ +S + L ++L I + + ++
Sbjct: 45 ILNDNWFNMLGRMTQLTTLEIGNNLIDDNMVKLISEMKQLTGLDLEINQIFNEGAKSISE 104
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG 406
L +L LN+ I D G+ +++ L LT L + RIT A ++ NL L I
Sbjct: 105 LRNLTYLNIGNNPINDEGIESISQLDNLTDLTVSSLRITSKSAKFISKLNNLTLLNIAYN 164
Query: 407 GLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
+ D G + L L++S + I+ G + + L L L +
Sbjct: 165 NIGDEGAKFISEIKSLKILDISLNGISPIGAKSISELDQLTVLYI 209
>gi|171912739|ref|ZP_02928209.1| Leucine-rich repeat [Verrucomicrobium spinosum DSM 4136]
Length = 443
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 131/433 (30%), Positives = 197/433 (45%), Gaps = 61/433 (14%)
Query: 20 LTEVSLEAFRDCALQDLCLG-QYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLK 78
L EV LE L+ L LG Y KW + S + G+ S L HL
Sbjct: 34 LDEVPLEVAELSHLRQLSLGWNYSPSAKKW-----NPDRSFFN---PGAMSNLSELAHLP 85
Query: 79 -DCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLD 137
+ +L++ FN C + G LR L NL S S+ RN ++ + L L L+
Sbjct: 86 LEWLDLRATGFNNCAALE--GFSALRSL-NL-SHSYVRN-------IEPLSALSQLQCLE 134
Query: 138 LERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD--- 194
L C + + K L +L +L + SD++PL+ L L+ L I +KVTD
Sbjct: 135 L--C---QTQVTDFKPLQRLGALQQLDLYSTSVSDLEPLAALHALQQLNICSTKVTDLEP 189
Query: 195 --------------SGIAYLKGLQKLTLL-NLEGCPVTAACLDSLSALGSLFYLNLNRCQ 239
+G+ L L K+T L LE LD+L+ L L L+L+ +
Sbjct: 190 LAGLSSLRQFNFSFTGVTELDPLAKITTLQQLEFRLAPIFDLDALAGLRELQKLDLSTTE 249
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
+ D E S +G+L+ L ++D L L GL+ L L+L C + L GL
Sbjct: 250 VRD--LEPLSGLGALQKLYFNHTAVSD--LGPLAGLSALRKLDL-RCARRVTDIGPLAGL 304
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 359
L+ L L+ TQV + L L+ L NL+ ++LS T +SD L L L++L+SL L + Q
Sbjct: 305 HALQRLILASTQV--TDLTPLTELRNLQHLDLSRTKVSD--LSPLTSLTALRSLGLTSTQ 360
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTG 415
++D LA L + L L L +++D G + +L+ L + +TD AGLT
Sbjct: 361 VSD--LAPLAAYRDLQRLFLDSTQVSDLGP--VAGMNSLQELYVSHTSVTDLGPLAGLTE 416
Query: 416 LVSLNVSNSRITS 428
L L+V + S
Sbjct: 417 LKRLSVDECAVNS 429
>gi|290990083|ref|XP_002677666.1| predicted protein [Naegleria gruberi]
gi|284091275|gb|EFC44922.1| predicted protein [Naegleria gruberi]
Length = 262
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 119/244 (48%), Gaps = 9/244 (3%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA-LGSLFYLNLNR 237
L L SL I V D IA L L+ LT LN+ P+ L + L L L++
Sbjct: 5 LKQLNSLNIGYCSVED--IAPLGQLKDLTCLNINHIPIGLEGLKIIGENLQQLKSLDVTN 62
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT---NLESLNL-DSCGIG-DEG 292
C ++++ + ++ +L+ L + F +CL ++ L+ L+SLN+ +S IG +G
Sbjct: 63 CGITNEAAQYIRQLNNLESLTITF-VFYQKCLKGVEALSEMKQLKSLNIGNSSDIGGPQG 121
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
++ L NL L + T + G R +S L +L ++L+ ISD + ++GL +
Sbjct: 122 AKLISSLYNLTSLRMDGTMIEDEGARFISELKHLRFLDLTGNNISDEGAKSISGLKHVTD 181
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
L++ I D G A+ ++ L L L +I D GA Y+ LRSL +CG +T
Sbjct: 182 LDMARNDIGDEGAKAIATMNQLKRLILDNNKIGDDGAQYIGKLPQLRSLAVCGNRITPVS 241
Query: 413 LTGL 416
+ L
Sbjct: 242 IQNL 245
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 8/245 (3%)
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYL-KGLQKLTLLNLE 212
L +L SLNI +C+ D+ PL L +L L I+ + G+ + + LQ+L L++
Sbjct: 5 LKQLNSLNIGYCSV---EDIAPLGQLKDLTCLNINHIPIGLEGLKIIGENLQQLKSLDVT 61
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRC--QLSDDGCEKFSKIGSLKVLNLGFNEIT--DEC 268
C +T + L +L L + Q G E S++ LK LN+G + +
Sbjct: 62 NCGITNEAAQYIRQLNNLESLTITFVFYQKCLKGVEALSEMKQLKSLNIGNSSDIGGPQG 121
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
+ L NL SL +D I DEG ++ L +L+ L+L+ + G + +SGL ++
Sbjct: 122 AKLISSLYNLTSLRMDGTMIEDEGARFISELKHLRFLDLTGNNISDEGAKSISGLKHVTD 181
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG 388
++++ I D + +A ++ LK L LD +I D G + L L L + G RIT
Sbjct: 182 LDMARNDIGDEGAKAIATMNQLKRLILDNNKIGDDGAQYIGKLPQLRSLAVCGNRITPVS 241
Query: 389 AAYLR 393
LR
Sbjct: 242 IQNLR 246
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 102/229 (44%), Gaps = 27/229 (11%)
Query: 47 KWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI-QISDGGLEHLRGL 105
+ + +I L S+D++ +T+ +++ +NL+SL F Q G+E L +
Sbjct: 43 EGLKIIGENLQQLKSLDVTNCGITNEAAQYIRQLNNLESLTITFVFYQKCLKGVEALSEM 102
Query: 106 SNLTSLSFRRNNAI-TAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW 164
L SL+ ++ I QG K + L NL L R+ G +
Sbjct: 103 KQLKSLNIGNSSDIGGPQGAKLISSLYNLTSL------RMDGTM---------------- 140
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
I D + +S L +L+ L ++ + ++D G + GL+ +T L++ + ++
Sbjct: 141 ---IEDEGARFISELKHLRFLDLTGNNISDEGAKSISGLKHVTDLDMARNDIGDEGAKAI 197
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
+ + L L L+ ++ DDG + K+ L+ L + N IT + +L+
Sbjct: 198 ATMNQLKRLILDNNKIGDDGAQYIGKLPQLRSLAVCGNRITPVSIQNLR 246
>gi|290981600|ref|XP_002673518.1| predicted protein [Naegleria gruberi]
gi|284087102|gb|EFC40774.1| predicted protein [Naegleria gruberi]
Length = 399
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 146/342 (42%), Gaps = 64/342 (18%)
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
C + + ++ L NLK L I S + D YL + L LN C + L
Sbjct: 34 CRSVGVAILENFPYLENLKELIIDGSYIGDENAIYLSKFKCLKRLNACSCNLGPKSLQYF 93
Query: 225 SALGSLFYLNL--NRCQ---------------------LSDDGCEKFSKIGSLKVLNLGF 261
S L SL L L N+ LS D E+ S+I +L LNL
Sbjct: 94 SNLNSLEELTLPYNKVSGGLYHLKKLKGLKKLDLSKNVLSMDDIEQLSEISNLNHLNLNG 153
Query: 262 NEITDECLVHLKGLT----NLESLNLDSCGIGD-------------------EGLVNLTG 298
++ +C+ ++ L LE+ N+D G+G+ E L +L
Sbjct: 154 VDLGGKCMEYISKLPLITLELEASNIDEIGLGNISQITTLSKLKLFGNNFGSESLRHLVK 213
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L NLK L L+ ++ G+ +LS L +LE ++LS+ I + ++ ++ L +L L L
Sbjct: 214 LSNLKYLSLAYNKIDDEGVEYLSLLQSLEYLSLSYNNIGNDGVQFISKLENLSQLELIRN 273
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS 418
+I + G+ ++ + LT L+L I + GA YL K L+ L++ G
Sbjct: 274 RIDERGVQFISKMKNLTKLNLGENPIRNIGALYLSKMKQLKGLDLDG------------- 320
Query: 419 LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
++I + HL +KNL+ L +E ++ ++ L+
Sbjct: 321 -----TKIDDFSIEHLCLMKNLQYLNIERTNLSETKVETLKE 357
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 123/239 (51%), Gaps = 2/239 (0%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N ++ D++ LS ++NL L ++ + + Y+ L +TL LE + L ++S
Sbjct: 130 NVLSMDDIEQLSEISNLNHLNLNGVDLGGKCMEYISKLPLITL-ELEASNIDEIGLGNIS 188
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
+ +L L L + K+ +LK L+L +N+I DE + +L L +LE L+L
Sbjct: 189 QITTLSKLKLFGNNFGSESLRHLVKLSNLKYLSLAYNKIDDEGVEYLSLLQSLEYLSLSY 248
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
IG++G+ ++ L NL LEL ++ G++ +S + NL +NL I + L+
Sbjct: 249 NNIGNDGVQFISKLENLSQLELIRNRIDERGVQFISKMKNLTKLNLGENPIRNIGALYLS 308
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR-NFKNLRSLEI 403
+ LK L+LD +I D + L + L +L++ ++++ L+ + K +++LE+
Sbjct: 309 KMKQLKGLDLDGTKIDDFSIEHLCLMKNLQYLNIERTNLSETKVETLKESLKLVKNLEL 367
>gi|290984930|ref|XP_002675179.1| predicted protein [Naegleria gruberi]
gi|284088774|gb|EFC42435.1| predicted protein [Naegleria gruberi]
Length = 330
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 142/314 (45%), Gaps = 32/314 (10%)
Query: 95 SDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGL 154
SDG + + +LT L R NN I +G ++ ++ L +L C I G + KG
Sbjct: 43 SDGNFQVFEMMKHLTHLDIR-NNGIGYEGAQSIGKVMQLTRL----C--IAGNNIGEKG- 94
Query: 155 MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC 214
K +S LT L +L +S +++ D G ++ L +LT LN+ G
Sbjct: 95 ------------------AKSISQLTQLTTLDVSFNQLCDYGTKFISQLSRLTDLNIRGN 136
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI---TDECLVH 271
+T LS L L +LN++ + +G + + + L L++ +N I + +
Sbjct: 137 RITDKGAIFLSDLKELRFLNISSNTILLEGIKSLTNLKQLTQLDISYNNILPSYAQTISE 196
Query: 272 LKGLTNLESLNLDSCGIGDE--GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
+ LTNL +L+ + G G + G+ + + NLK L + ++ + L +
Sbjct: 197 MDQLTNL-NLSYNDYGWGSDSNGVRYICEMKNLKTLTFGGICIRQYIFNYIKEMKQLACL 255
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGA 389
N+ + I S + ++ ++ L L++ +I D G ++ + LT L++ G RI G
Sbjct: 256 NIRSSYIGSSSAKLISSMNQLTELDISYNEIGDVGAKHISEMDQLTSLNVEGCRINSEGT 315
Query: 390 AYLRNFKNLRSLEI 403
YL+ K L L I
Sbjct: 316 EYLKQMKQLTYLNI 329
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 130/287 (45%), Gaps = 10/287 (3%)
Query: 169 TDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG 228
+D + + + +L L I + + G + + +LT L + G + S+S L
Sbjct: 43 SDGNFQVFEMMKHLTHLDIRNNGIGYEGAQSIGKVMQLTRLCIAGNNIGEKGAKSISQLT 102
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
L L+++ QL D G + S++ L LN+ N ITD+ + L L L LN+ S I
Sbjct: 103 QLTTLDVSFNQLCDYGTKFISQLSRLTDLNIRGNRITDKGAIFLSDLKELRFLNISSNTI 162
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS----LRKL 344
EG+ +LT L L L++S + S + +S + L ++NLS+ GS +R +
Sbjct: 163 LLEGIKSLTNLKQLTQLDISYNNILPSYAQTISEMDQLTNLNLSYNDYGWGSDSNGVRYI 222
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
+ +LK+L I + + L L++ + I S A + + L L+I
Sbjct: 223 CEMKNLKTLTFGGICIRQYIFNYIKEMKQLACLNIRSSYIGSSSAKLISSMNQLTELDIS 282
Query: 405 GGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
+ D G + L SLNV RI S G +LK +K L L +
Sbjct: 283 YNEIGDVGAKHISEMDQLTSLNVEGCRINSEGTEYLKQMKQLTYLNI 329
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 118/249 (47%), Gaps = 7/249 (2%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
++G+++ + G + + L +LD +F Q+ D G + + LS LT L+ R N IT +G
Sbjct: 85 IAGNNIGEKGAKSISQLTQLTTLDVSFN-QLCDYGTKFISQLSRLTDLNIR-GNRITDKG 142
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+ L L L++ T + G+ +L L +L L+I + N I S + +S + L
Sbjct: 143 AIFLSDLKELRFLNISSNTILLEGIKSLTNLKQLTQLDISYNN-ILPSYAQTISEMDQLT 201
Query: 184 SLQISCSKV---TDS-GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ 239
+L +S + +DS G+ Y+ ++ L L G + + + + L LN+
Sbjct: 202 NLNLSYNDYGWGSDSNGVRYICEMKNLKTLTFGGICIRQYIFNYIKEMKQLACLNIRSSY 261
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
+ + S + L L++ +NEI D H+ + L SLN++ C I EG L +
Sbjct: 262 IGSSSAKLISSMNQLTELDISYNEIGDVGAKHISEMDQLTSLNVEGCRINSEGTEYLKQM 321
Query: 300 CNLKCLELS 308
L L +S
Sbjct: 322 KQLTYLNIS 330
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 6/128 (4%)
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
SDG+ + + L L++ I G ++ + LT L + G I + GA +
Sbjct: 43 SDGNFQVFEMMKHLTHLDIRNNGIGYEGAQSIGKVMQLTRLCIAGNNIGEKGAKSISQLT 102
Query: 397 NLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
L +L++ L D G L+ L LN+ +RIT G L LK LR L + S +
Sbjct: 103 QLTTLDVSFNQLCDYGTKFISQLSRLTDLNIRGNRITDKGAIFLSDLKELRFLNISSNTI 162
Query: 451 TANDIKRL 458
IK L
Sbjct: 163 LLEGIKSL 170
>gi|414878156|tpg|DAA55287.1| TPA: hypothetical protein ZEAMMB73_170021 [Zea mays]
Length = 663
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 223/478 (46%), Gaps = 65/478 (13%)
Query: 34 QDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGS-DVTDSGLIHLKDCSNLQSLDFNFCI 92
+ +CL + GV + ++ + + L +VDLS D L + L+ L + C+
Sbjct: 111 RSVCLARANGVGWRGLEALVAACPKLEAVDLSHCVSAGDREAAALAAAAGLRELRLDKCL 170
Query: 93 QISDGGLEHLR-GLSNLTSLSFRRNNAITAQGMKAFAG-LINLVKLDLERCTRIHGGLVN 150
++D GL + G L LS + I+ G+ A L L++ +G L +
Sbjct: 171 AVTDMGLAKVAVGCPRLEKLSLKWCREISDIGIDLLAKKCPELRSLNISYLKVGNGSLRS 230
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIA-------YLK 201
+ L +LE L + C+CI D ++ LS G +L+S+ +S C VT G+A +L+
Sbjct: 231 ISSLERLEELAMVCCSCIDDEGLELLSKGSDSLQSVDVSRCDHVTSHGLASLIDGRNFLQ 290
Query: 202 GL---------------------QKLTLLNLEGCPVTAACLDSL-SALGSLFYLNLNRCQ 239
L + LT L L+G V+ + L+++ + L + L++C
Sbjct: 291 KLYAADCLHEIGQRFVSKLATLKETLTTLKLDGLEVSDSLLEAIGESCNKLVEIGLSKCS 350
Query: 240 -LSDDGCEKF-SKIGSLKVLNLG-FNEITDECLVHLKG-LTNLESLNLDSCG-IGDEGLV 294
++D+G ++ L+ ++L N T+ L + G LE L L+SC I ++GL
Sbjct: 351 GVTDEGISSLVARCSDLRTIDLTCCNLSTNNALDSIAGNCKMLECLRLESCSLINEKGLK 410
Query: 295 NLTGLC-NLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSS--- 349
+ C NLK ++L+D V + L HL+ + L + L + ISD + +A +SS
Sbjct: 411 RIATCCPNLKEIDLTDCGVDDAALEHLAKCSELRVLKLGLCSSISD---KGIAFISSNCG 467
Query: 350 -LKSLNL-DARQITDTGLAALTSLTGLTHLDL----FGARITDSGAAYLRNFKNLRSLE- 402
L L+L ITD GLAAL + G + L + +ITD+G +L + + L +LE
Sbjct: 468 KLVELDLYRCSSITDDGLAALAN--GCKRIKLLNLCYCNKITDTGLGHLGSLEELTNLEL 525
Query: 403 -----ICGGGLTDA--GLTGLVSLNVSNSR-ITSAGLRHLKPLK-NLRSLTLESCKVT 451
I G G++ G L+ L++ + AGL L NLR LT+ C+VT
Sbjct: 526 RCLVRITGIGISSVAIGCKNLIELDLKRCYSVDDAGLWALARYALNLRQLTISYCQVT 583
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 32/230 (13%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
+N+K + IA+ +L +DL+ V D+ L HL CS L+ L C ISD G+ +
Sbjct: 404 INEKGLKRIATCCPNLKEIDLTDCGVDDAALEHLAKCSELRVLKLGLCSSISDKGIAFIS 463
Query: 104 G-LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
L L R ++IT G+ A A G +++ LN+
Sbjct: 464 SNCGKLVELDLYRCSSITDDGLAALAN-----------------------GCKRIKLLNL 500
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISC-SKVTDSGIAYLK-GLQKLTLLNLEGC-PVTAA 219
+CN ITD+ + L L L +L++ C ++T GI+ + G + L L+L+ C V A
Sbjct: 501 CYCNKITDTGLGHLGSLEELTNLELRCLVRITGIGISSVAIGCKNLIELDLKRCYSVDDA 560
Query: 220 CLDSLSALG-SLFYLNLNRCQLSDDG-CEKFSKIGSL---KVLNLGFNEI 264
L +L+ +L L ++ CQ++ G C S + L K+++L + I
Sbjct: 561 GLWALARYALNLRQLTISYCQVTGLGLCHLLSSLRCLQDIKMVHLSWVSI 610
>gi|283781267|ref|YP_003372022.1| hypothetical protein Psta_3501 [Pirellula staleyi DSM 6068]
gi|283439720|gb|ADB18162.1| hypothetical protein Psta_3501 [Pirellula staleyi DSM 6068]
Length = 436
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 138/318 (43%), Gaps = 39/318 (12%)
Query: 94 ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTR----IHGGLV 149
+SD LS+L LS N IT +G++ L + +R ++G
Sbjct: 102 VSDEVFARSVALSDLQFLSIYETN-ITNEGLQVLRKFSKLRSFSVAPVSRYEKSMYGAPQ 160
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
+K S K IT ++PL + ++SLQ+ +++ S +A L+ KL +
Sbjct: 161 WSYPFLKQRSDRPK----ITVQGLEPLRNIATIESLQLIDAQLAPSDLAILQSWPKLGSI 216
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
L +T+ + L+A + L L +++ D + SLK L L +++ + L
Sbjct: 217 ALSTT-MTSEAVQHLAACKRVSNLTLGYREITADEIRALGEWESLKKLMLLHAKLSSDAL 275
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
L L +LE L+L+ C + D+ L +L L L L ++ GLRHL L+ I
Sbjct: 276 AALASLESLEQLDLEECNLTDDDLAHLKLPAKLTILGLKRNEIDGPGLRHLVPF-QLKQI 334
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDA----------------------------RQIT 361
L F IS+ +L +LA L +L++LNL +Q+T
Sbjct: 335 GLEFNNISNATLGELAQLRTLETLNLSYCRQIDNQGIESGVLQRMTHVRQLGLRGLKQVT 394
Query: 362 DTGLAALTSLTGLTHLDL 379
D LA + +T L H+ +
Sbjct: 395 DASLAEIVKMTHLKHITI 412
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 117/280 (41%), Gaps = 31/280 (11%)
Query: 205 KLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCE---KFSKIGSLKVLNLGF 261
+L L L G V+ AL L +L++ ++++G + KFSK+ S V +
Sbjct: 91 QLAHLGLWGEGVSDEVFARSVALSDLQFLSIYETNITNEGLQVLRKFSKLRSFSVAPVSR 150
Query: 262 NE----------------------ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
E IT + L L+ + +ESL L + L L
Sbjct: 151 YEKSMYGAPQWSYPFLKQRSDRPKITVQGLEPLRNIATIESLQLIDAQLAPSDLAILQSW 210
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 359
L + LS T + S ++HL+ + ++ L + I+ +R L SLK L L +
Sbjct: 211 PKLGSIALSTT-MTSEAVQHLAACKRVSNLTLGYREITADEIRALGEWESLKKLMLLHAK 269
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR-----NFKNLRSLEICGGGLTDAGLT 414
++ LAAL SL L LDL +TD A+L+ L+ EI G GL
Sbjct: 270 LSSDALAALASLESLEQLDLEECNLTDDDLAHLKLPAKLTILGLKRNEIDGPGLRHLVPF 329
Query: 415 GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAND 454
L + + + I++A L L L+ L +L L C+ N
Sbjct: 330 QLKQIGLEFNNISNATLGELAQLRTLETLNLSYCRQIDNQ 369
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 22/184 (11%)
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
L L L G+ DE L +L+ L + +T + + GL+ L + L S +++
Sbjct: 91 QLAHLGLWGEGVSDEVFARSVALSDLQFLSIYETNITNEGLQVLRKFSKLRSFSVAPVSR 150
Query: 337 SDGSLRKLAGLSS--LKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
+ S+ S LK + D +IT GL L ++ + L L A++ S A L++
Sbjct: 151 YEKSMYGAPQWSYPFLKQRS-DRPKITVQGLEPLRNIATIESLQLIDAQLAPSDLAILQS 209
Query: 395 FKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAND 454
+ L S+ + ++ +TS ++HL K + +LTL ++TA++
Sbjct: 210 WPKLGSIAL-------------------STTMTSEAVQHLAACKRVSNLTLGYREITADE 250
Query: 455 IKRL 458
I+ L
Sbjct: 251 IRAL 254
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 7/120 (5%)
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGG 407
L L L ++D A +L+ L L ++ IT+ G LR F LRS +
Sbjct: 90 PQLAHLGLWGEGVSDEVFARSVALSDLQFLSIYETNITNEGLQVLRKFSKLRSFSVAPVS 149
Query: 408 LTDAGLTGLVSLNVS-------NSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
+ + G + +IT GL L+ + + SL L ++ +D+ LQS
Sbjct: 150 RYEKSMYGAPQWSYPFLKQRSDRPKITVQGLEPLRNIATIESLQLIDAQLAPSDLAILQS 209
>gi|85679224|gb|ABC72028.1| InlA [Listeria monocytogenes]
Length = 794
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 97 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 150
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 151 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 202
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 203 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 255
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 256 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 309
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 310 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 367
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 368 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVKYKV 425
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 426 NVSIPNTVKNVTGALIAPATISDGG 450
>gi|290982306|ref|XP_002673871.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284087458|gb|EFC41127.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 529
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 202/444 (45%), Gaps = 73/444 (16%)
Query: 58 SLLSVDLSGSDVTDSG---LIHLKDC------SN------------------LQSLDFNF 90
+L+ +D+ GSD+ DSG L LK+ SN L +LD +F
Sbjct: 104 NLIHLDIYGSDIEDSGVACLCKLKELKILNIGSNKLTSKGRGIEMISKFMKCLTNLDISF 163
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN 150
+ + G++ L+ L LT L+ + I A G++ + L+KL+ I G +N
Sbjct: 164 N-SLGNSGMKQLK-LDKLTDLNVSYCD-IDATGIQFIRNMTCLIKLN------ISGNNIN 214
Query: 151 LKG------LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQ 204
KG L L+ L+I C+ + K +S + NLK L IS +++ + G + L
Sbjct: 215 CKGALLLSNLKNLQELDIASA-CLKEEGAKHISRMDNLKFLSISHNQILNGGAKAISSLS 273
Query: 205 KLTLLNLEGCPVTAACLDSLSA-LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNE 263
KL +L++ C + L +S L +L +++ DG + + +LKVL+
Sbjct: 274 KLEILHISNCDIGCEGLQYISKNLKNLTEIDIGGNHFGMDGVIVIASMNNLKVLS----- 328
Query: 264 ITDECL-----VHLKGLTNLESL----NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS 314
I + CL +L + NL L N+D IG+ ++ L NL L ++ +
Sbjct: 329 IAESCLGLLGVQYLSKMENLTYLNISDNIDDIFIGE----SINDLQNLTTLLYTNNSLSM 384
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKL-AGLSSLKSLNLDARQITDTGLAALT-SLT 372
+S LT L ++N+ T ISD + L + L L +L D IT G+ ++ S+
Sbjct: 385 DEAITISSLTQLTTLNIESTEISDVHIEILCSSLHHLINLYADTNFITSWGVKLISESMI 444
Query: 373 GLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS---------LNVSN 423
L L L G RI D G Y+ + ++LR L +C + D G+ LV+ L N
Sbjct: 445 DLESLYLSGNRIGDEGLTYICSLQHLRILGVCNCEIGDRGVQVLVNCAPKKLRELLIDCN 504
Query: 424 SRITSAGLRHLKPLKNLRSLTLES 447
ITS G + + + L S+ LE+
Sbjct: 505 ENITSKGCKLIYSIPQLNSIYLEN 528
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 153/344 (44%), Gaps = 46/344 (13%)
Query: 16 YSRCLT--EVSLEAFRDCALQDLCLGQYPGVNDKWMDVIAS------QGSSLLSVDLSGS 67
+ +CLT ++S + + ++ L L + +N + D+ A+ + L+ +++SG+
Sbjct: 152 FMKCLTNLDISFNSLGNSGMKQLKLDKLTDLNVSYCDIDATGIQFIRNMTCLIKLNISGN 211
Query: 68 DVTDSGLIHLKDCSNLQSLDF-NFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
++ G + L + NLQ LD + C++ + G +H+ + NL LS N + G KA
Sbjct: 212 NINCKGALLLSNLKNLQELDIASACLK--EEGAKHISRMDNLKFLSISHNQILNG-GAKA 268
Query: 127 FAGLINLVKLDLERCTRIHGGLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
+ L L L + C GL + K L L ++I N + ++ + NLK L
Sbjct: 269 ISSLSKLEILHISNCDIGCEGLQYISKNLKNLTEIDIGG-NHFGMDGVIVIASMNNLKVL 327
Query: 186 QISCSKVTDSGIAYLKGLQKLTLLNLEGC---PVTAACLDSLSALGSLFYLNLNRCQLSD 242
I+ S + G+ YL ++ LT LN+ ++ L L +L Y N LS
Sbjct: 328 SIAESCLGLLGVQYLSKMENLTYLNISDNIDDIFIGESINDLQNLTTLLYTN---NSLSM 384
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD-------ECLVHL-------------------KGLT 276
D S + L LN+ EI+D L HL + +
Sbjct: 385 DEAITISSLTQLTTLNIESTEISDVHIEILCSSLHHLINLYADTNFITSWGVKLISESMI 444
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
+LESL L IGDEGL + L +L+ L + + ++G G++ L
Sbjct: 445 DLESLYLSGNRIGDEGLTYICSLQHLRILGVCNCEIGDRGVQVL 488
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 28/194 (14%)
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGL------RHLSGLTNL 326
K + NL L++ I D G+ L L LK L + ++ S G + + LTNL
Sbjct: 100 KLMPNLIHLDIYGSDIEDSGVACLCKLKELKILNIGSNKLTSKGRGIEMISKFMKCLTNL 159
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
+ +SF + + +++L L L LN+ I TG+ + ++T L L++ G I
Sbjct: 160 D---ISFNSLGNSGMKQLK-LDKLTDLNVSYCDIDATGIQFIRNMTCLIKLNISGNNINC 215
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
GA L N KNL+ L+I L + G +H+ + NL+ L++
Sbjct: 216 KGALLLSNLKNLQELDIASACLKEEGA------------------KHISRMDNLKFLSIS 257
Query: 447 SCKVTANDIKRLQS 460
++ K + S
Sbjct: 258 HNQILNGGAKAISS 271
>gi|119485475|ref|ZP_01619803.1| Rab family protein [Lyngbya sp. PCC 8106]
gi|119457231|gb|EAW38357.1| Rab family protein [Lyngbya sp. PCC 8106]
Length = 457
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 180/360 (50%), Gaps = 53/360 (14%)
Query: 126 AFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
A L+ +++LDL R ++I L L L L LN+ N ITD + PLS LTNL L
Sbjct: 94 AQKSLLQVIELDLSR-SKI-SDLSPLITLPHLTRLNLSE-NQITD--LTPLSNLTNLTRL 148
Query: 186 QISCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
+S + + D S I+ L LQ L L E L LS L L L+L+ ++SD
Sbjct: 149 NLSSNLIQDLSPISELPNLQILLLYKNE-----IEVLSPLSNLSGLTELSLDSNKISD-- 201
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV----NLTGLC 300
S++ +L L+L N+I D ++ L NL L+L+ + D L+ NLT L
Sbjct: 202 ISSLSELNNLTNLSLSENQIQDLSIIA--NLENLTQLSLNGNKVNDISLISELQNLTKL- 258
Query: 301 NLKCLELSDTQVGSS---------------GLRHLSGLTNLESINLSFTGISDGSLRKLA 345
NLK ++ D S+ + LS LT LE+++LS I++ ++ L+
Sbjct: 259 NLKTNQIEDLSSLSNLSNLKELNLDSNKLIDVSALSSLTQLETLSLSENNITN--IQPLS 316
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTH-LDLFGARITDSGAAYLRNFKNLRSLEIC 404
L +L +L L + QI+D + AL+SLT LT L+L +I+D L N KNL + +
Sbjct: 317 NLENLITLQLRSNQISD--IKALSSLTNLTEDLNLIDNQISD--IKPLSNLKNLSRVGLS 372
Query: 405 GGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
++D + L+ LV L + ++IT ++PL NL +LT + N IK ++S
Sbjct: 373 KNQISDLKPLSDLSKLVILYLDENKIT-----EVQPLSNLTNLT--ELNLWNNQIKTIES 425
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 86 LDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIH 145
LD N I +S L L+ L +LS NN Q + L NL+ L L R +I
Sbjct: 282 LDSNKLIDVS-----ALSSLTQLETLSLSENNITNIQ---PLSNLENLITLQL-RSNQIS 332
Query: 146 GGLVNLKGLMKLESLNIKWCNCITD--SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGL 203
++K L L +L + N I + SD+KPLS L NL + +S ++++D + L L
Sbjct: 333 ----DIKALSSLTNL-TEDLNLIDNQISDIKPLSNLKNLSRVGLSKNQISD--LKPLSDL 385
Query: 204 QKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNE 263
KL +L L+ +T LS L +L LNL Q+ E S + +L L L N
Sbjct: 386 SKLVILYLDENKITEV--QPLSNLTNLTELNLWNNQIK--TIESLSTLDNLTYLGLQENP 441
Query: 264 IT-DECLVHLKGL 275
I EC V K +
Sbjct: 442 IEKKECPVQPKSI 454
>gi|217965469|ref|YP_002351147.1| internalin-A [Listeria monocytogenes HCC23]
gi|386007166|ref|YP_005925444.1| internalin A [Listeria monocytogenes L99]
gi|386025755|ref|YP_005946531.1| internalin A [Listeria monocytogenes M7]
gi|167861970|gb|ACA05684.1| InlA [Listeria monocytogenes]
gi|167861982|gb|ACA05690.1| InlA [Listeria monocytogenes]
gi|217334739|gb|ACK40533.1| internalin-A [Listeria monocytogenes HCC23]
gi|307569976|emb|CAR83155.1| internalin A [Listeria monocytogenes L99]
gi|336022336|gb|AEH91473.1| internalin A [Listeria monocytogenes M7]
Length = 800
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLASLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|115689700|ref|XP_783241.2| PREDICTED: F-box/LRR-repeat protein 13-like [Strongylocentrotus
purpuratus]
Length = 871
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 171/411 (41%), Gaps = 77/411 (18%)
Query: 20 LTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHL- 77
LT+ S +A C LQDL + + PG+ND M +A S LL +++S +++TD+ L L
Sbjct: 312 LTKPSFKAVGQCRNLQDLNMSECPGLNDDTMKYVAEGCSVLLYLNISFTNITDATLRLLA 371
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL---RGLSNLTSLSFRRNNAITAQGMKAFAGLINLV 134
+ CSNLQ L +C + SD GL++L RG L L IT G K +G
Sbjct: 372 RCCSNLQYLSLAYCKRFSDKGLQYLGTGRGGRRLVHLDLSGCPQITVNGYKNISG----- 426
Query: 135 KLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG-LTNLKSLQ-ISCSKV 192
G KL+ L I C + D + ++ N++ + + +
Sbjct: 427 ------------------GCPKLQHLIINDCYTLRDDMIVAVAANCHNIRCISFLYTPNI 468
Query: 193 TDSGIAYLKGLQKLTLLNLEG-CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI 251
TD + L +KL + +EG C +T A S LG + ++L +SD C +
Sbjct: 469 TDVALKALAVHRKLQQIRIEGNCKITDA---SFKLLGR-YCVDLRHIYVSD--CPR---- 518
Query: 252 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDT 310
ITD L L N+ LN+ C I D G+ NL
Sbjct: 519 ------------ITDAALKSLATCRNINVLNVADCIRISDNGVRNLVE------------ 554
Query: 311 QVGSSG--LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
G SG LR ++ + ++S I+ + G + ITD G L
Sbjct: 555 --GPSGPKLREMNLTNCVRVTDVSIMKITQKCYSLVYGSFCF------SEHITDAGAEML 606
Query: 369 TSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGLVS 418
++ L+ LD+ G ITD+G L N +LR + + +TD G+
Sbjct: 607 GNMPALSSLDISGCNITDTGLGALGNCYHLRDVVLSECHQITDLGIQKFAQ 657
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 161/345 (46%), Gaps = 35/345 (10%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL--KGLMK 156
L+H R + L+ + + +T KA NL L++ C ++ + +G
Sbjct: 294 LQHYRPY--VLHLNIKGCSMLTKPSFKAVGQCRNLQDLNMSECPGLNDDTMKYVAEGCSV 351
Query: 157 LESLNIKWCNCITDSDMKPLSGL-TNLKSLQIS-CSKVTDSGIAYL---KGLQKLTLLNL 211
L LNI + N ITD+ ++ L+ +NL+ L ++ C + +D G+ YL +G ++L L+L
Sbjct: 352 LLYLNISFTN-ITDATLRLLARCCSNLQYLSLAYCKRFSDKGLQYLGTGRGGRRLVHLDL 410
Query: 212 EGCP-VTAACLDSLSA-LGSLFYLNLNRCQ-LSDD-------GCEKFSKIGSLKVLNLGF 261
GCP +T ++S L +L +N C L DD C I L N
Sbjct: 411 SGCPQITVNGYKNISGGCPKLQHLIINDCYTLRDDMIVAVAANCHNIRCISFLYTPN--- 467
Query: 262 NEITDECLVHLKGLTNLESLNLD-SCGIGDEGLVNLTGLC-NLKCLELSD-TQVGSSGLR 318
ITD L L L+ + ++ +C I D L C +L+ + +SD ++ + L+
Sbjct: 468 --ITDVALKALAVHRKLQQIRIEGNCKITDASFKLLGRYCVDLRHIYVSDCPRITDAALK 525
Query: 319 HLSGLTNLESINLS-FTGISDGSLRKLAGLSS---LKSLNL-DARQITDTGLAALTS-LT 372
L+ N+ +N++ ISD +R L S L+ +NL + ++TD + +T
Sbjct: 526 SLATCRNINVLNVADCIRISDNGVRNLVEGPSGPKLREMNLTNCVRVTDVSIMKITQKCY 585
Query: 373 GLTHLDL-FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL 416
L + F ITD+GA L N L SL+I G +TD GL L
Sbjct: 586 SLVYGSFCFSEHITDAGAEMLGNMPALSSLDISGCNITDTGLGAL 630
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 28/175 (16%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRR 115
+L S+D+SG ++TD+GL L +C +L+ + + C QI+D G++ + +L L
Sbjct: 610 PALSSLDISGCNITDTGLGALGNCYHLRDVVLSECHQITDLGIQKFAQQCRDLDRLDISH 669
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+T Q +K A C R KL LNI C+ ++D ++
Sbjct: 670 CLQLTDQAIKNLAF-----------CCR------------KLSFLNIAGCSQLSDMSIRY 706
Query: 176 LSGLTN-LKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSA 226
+SG+ + L+SL S C KV+D + +L KGL++L LN+ C +T + LSA
Sbjct: 707 ISGVCHYLQSLNFSGCIKVSDDSMRFLRKGLKRLRNLNMLYCHLITKPTIVKLSA 761
>gi|313485061|gb|ADR53004.1| InlA [Listeria monocytogenes]
Length = 724
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|300704109|ref|YP_003745711.1| leucine-rich-repeat type III effector protein (gala5) [Ralstonia
solanacearum CFBP2957]
gi|299071772|emb|CBJ43096.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
solanacearum CFBP2957]
Length = 535
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 165/362 (45%), Gaps = 16/362 (4%)
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES------LNIKWCNCITDSDMKP 175
QG+ AG+ +L +L L R + G + L G+ +L + L++ C I + +
Sbjct: 152 QGLITAAGIAHLSRLPLVRLN-LSGNRIGLAGVQRLANHPTLTELDVSRCG-IGPEEARA 209
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L+ L +L S + V G+ L G + LT L+L + A L + L LN+
Sbjct: 210 LAASARLTTLNASHNGVGSEGVQALVGCKTLTSLDLSDNGLGDAEAQRLGSSERLTTLNV 269
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
NR ++ G + +L L++G N I D + L L +LN++ IG G+
Sbjct: 270 NRNRIDVQGARALAACKTLTSLDIGGNSIGDAGVNALVANAQLTTLNVERAEIGAHGVQA 329
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L L L + + +G G L+ T+L +++ GI + LA + L +LNL
Sbjct: 330 LADCKTLTSLRIDNNNIGDEGANTLAASTSLTTLHSESNGIGPTGAQALAANTRLTTLNL 389
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG 415
I D G A + T L L + ++D+ A L K L +L+ + DAG
Sbjct: 390 GHNSIGDAGAQAWLANTTLVWLSVRRNGLSDACAIRLAASKTLTTLDASDNAIKDAGARA 449
Query: 416 LVS------LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKR-LQSRDLPNL-V 467
L + LNVS++ I +AG R L L+SL L + ++ ++ L +R L +L V
Sbjct: 450 LAANRTLTALNVSSNEIGNAGARALAANTMLKSLDLRNNRMLEAGVRALLANRTLSSLGV 509
Query: 468 SF 469
SF
Sbjct: 510 SF 511
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 167/377 (44%), Gaps = 32/377 (8%)
Query: 70 TDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR----NNAITAQGMK 125
TD+ L L L++LD + C + GL G+++L+ L R N I G++
Sbjct: 128 TDADLAGLPPT--LKTLDLSRC-RGRGQGLITAAGIAHLSRLPLVRLNLSGNRIGLAGVQ 184
Query: 126 AFAGLINLVKLDLERC----------------TRIHG--------GLVNLKGLMKLESLN 161
A L +LD+ RC T ++ G+ L G L SL+
Sbjct: 185 RLANHPTLTELDVSRCGIGPEEARALAASARLTTLNASHNGVGSEGVQALVGCKTLTSLD 244
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 221
+ N + D++ + L L +L ++ +++ G L + LT L++ G + A +
Sbjct: 245 LS-DNGLGDAEAQRLGSSERLTTLNVNRNRIDVQGARALAACKTLTSLDIGGNSIGDAGV 303
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
++L A L LN+ R ++ G + + +L L + N I DE L T+L +L
Sbjct: 304 NALVANAQLTTLNVERAEIGAHGVQALADCKTLTSLRIDNNNIGDEGANTLAASTSLTTL 363
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 341
+ +S GIG G L L L L +G +G + T L +++ G+SD
Sbjct: 364 HSESNGIGPTGAQALAANTRLTTLNLGHNSIGDAGAQAWLANTTLVWLSVRRNGLSDACA 423
Query: 342 RKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
+LA +L +L+ I D G AL + LT L++ I ++GA L L+SL
Sbjct: 424 IRLAASKTLTTLDASDNAIKDAGARALAANRTLTALNVSSNEIGNAGARALAANTMLKSL 483
Query: 402 EICGGGLTDAGLTGLVS 418
++ + +AG+ L++
Sbjct: 484 DLRNNRMLEAGVRALLA 500
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 116/295 (39%), Gaps = 57/295 (19%)
Query: 44 VNDKWMDVIASQG----SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGL 99
VN +DV ++ +L S+D+ G+ + D+G+ L + L +L+ +I G+
Sbjct: 269 VNRNRIDVQGARALAACKTLTSLDIGGNSIGDAGVNALVANAQLTTLNVERA-EIGAHGV 327
Query: 100 EHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES 159
+ L LTSL NN I +G A +L L E
Sbjct: 328 QALADCKTLTSLRIDNNN-IGDEGANTLAASTSLTTLHSE-------------------- 366
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGI-AYLKGLQKLTLLNLEGCPVTA 218
N I + + L+ T L +L + + + D+G A+L
Sbjct: 367 -----SNGIGPTGAQALAANTRLTTLNLGHNSIGDAGAQAWL------------------ 403
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
A +L +L++ R LSD + + +L L+ N I D L L
Sbjct: 404 -------ANTTLVWLSVRRNGLSDACAIRLAASKTLTTLDASDNAIKDAGARALAANRTL 456
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
+LN+ S IG+ G L LK L+L + ++ +G+R L L S+ +SF
Sbjct: 457 TALNVSSNEIGNAGARALAANTMLKSLDLRNNRMLEAGVRALLANRTLSSLGVSF 511
>gi|428304096|ref|YP_007140921.1| hypothetical protein Cri9333_0441 [Crinalium epipsammum PCC 9333]
gi|428245631|gb|AFZ11411.1| leucine-rich repeat-containing protein [Crinalium epipsammum PCC
9333]
Length = 504
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 145/280 (51%), Gaps = 49/280 (17%)
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
LE ++ L NLT+L+ FA I+ VK L+ L KL
Sbjct: 83 SLEGIQALRNLTTLNL-------------FANQISDVK--------------PLRSLTKL 115
Query: 158 ESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
+L + N I SD+KPL GLTNL L +S +K++D + L GL KLT L+L ++
Sbjct: 116 TTLELV-SNKI--SDVKPLFGLTNLNRLDLSDNKISD--VKPLTGLTKLTELDLSDNKIS 170
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 277
++ L L +L L+L+R +LSD + + L +L L N+I+D L L LT
Sbjct: 171 D--VEPLFGLTNLGVLDLSRNKLSD--LKPLWGLTKLTMLLLNTNQISD--LKPLANLTK 224
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
L +L+L I D + LTGL L L L D ++ S L+ L GLTNL + L+ IS
Sbjct: 225 LTTLDLSDNKISD--VKPLTGLTKLTELALGDNKI--SDLKPLLGLTNLTELVLNTNEIS 280
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
D + L GL+++ SL+L +I++ +TSLTGLT L
Sbjct: 281 D--VTSLTGLTNITSLHLGGNKISN-----VTSLTGLTKL 313
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 132/236 (55%), Gaps = 19/236 (8%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
++ L L +LN+ + N I SD+KPL LT L +L++ +K++D + L GL L L+
Sbjct: 87 IQALRNLTTLNL-FANQI--SDVKPLRSLTKLTTLELVSNKISD--VKPLFGLTNLNRLD 141
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
L ++ + L+ L L L+L+ ++SD E + +L VL+L N+++D L
Sbjct: 142 LSDNKISD--VKPLTGLTKLTELDLSDNKISD--VEPLFGLTNLGVLDLSRNKLSD--LK 195
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
L GLT L L L++ I D L L L L L+LSD ++ S ++ L+GLT L +
Sbjct: 196 PLWGLTKLTMLLLNTNQISD--LKPLANLTKLTTLDLSDNKI--SDVKPLTGLTKLTELA 251
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
L ISD L+ L GL++L L L+ +I+D + +LT LT +T L L G +I++
Sbjct: 252 LGDNKISD--LKPLLGLTNLTELVLNTNEISD--VTSLTGLTNITSLHLGGNKISN 303
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLER 140
+NL LD + +ISD ++ L GL+ LT L N ++ GL NL LDL R
Sbjct: 135 TNLNRLDLSDN-KISD--VKPLTGLTKLTELDLSDNKI---SDVEPLFGLTNLGVLDLSR 188
Query: 141 CTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYL 200
L +LK L L L + N SD+KPL+ LT L +L +S +K++D + L
Sbjct: 189 -----NKLSDLKPLWGLTKLTMLLLNTNQISDLKPLANLTKLTTLDLSDNKISD--VKPL 241
Query: 201 KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG 260
GL KLT L L ++ L L L +L L LN ++SD + + ++ L+LG
Sbjct: 242 TGLTKLTELALGDNKISD--LKPLLGLTNLTELVLNTNEISD--VTSLTGLTNITSLHLG 297
Query: 261 FNEITDECLVHLKGLTNLESLNL 283
N+I++ + L GLT L L L
Sbjct: 298 GNKISN--VTSLTGLTKLAWLYL 318
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
L G+ NL N T SL + L +L +LNL A QI+D + L SLT LT L+L
Sbjct: 68 LQGVKNLNISNAEIT-----SLEGIQALRNLTTLNLFANQISD--VKPLRSLTKLTTLEL 120
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTDA----GLTGLVSLNVSNSRIT 427
+I+D + NL L++ ++D GLT L L++S+++I+
Sbjct: 121 VSNKISDVKPLF--GLTNLNRLDLSDNKISDVKPLTGLTKLTELDLSDNKIS 170
>gi|85679228|gb|ABC72030.1| InlA [Listeria monocytogenes]
Length = 794
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 97 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 150
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 151 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 202
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 203 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 255
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 256 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 309
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 310 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 367
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 368 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 425
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 426 NVSIPNTVKNVTGALIAPATISDGG 450
>gi|290892407|ref|ZP_06555401.1| InlA protein [Listeria monocytogenes FSL J2-071]
gi|290557973|gb|EFD91493.1| InlA protein [Listeria monocytogenes FSL J2-071]
Length = 796
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 101 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 154
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 155 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 206
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 207 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 259
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 260 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 313
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 314 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 371
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 372 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 429
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 430 NVSIPNTVKNVTGALIAPATISDGG 454
>gi|149242645|pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 182/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 63 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 116
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ LN + N +TD +KPL
Sbjct: 117 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLN--FGNQVTD--LKPL 168
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 169 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 221
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 222 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 275
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 276 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 333
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 334 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 391
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 392 NVSIPNTVKNVTGALIAPATISDGG 416
>gi|320169501|gb|EFW46400.1| tyrosine-protein kinase Src42A [Capsaspora owczarzaki ATCC 30864]
Length = 1286
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 152/344 (44%), Gaps = 12/344 (3%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVN 150
QI+ + GL+ + SL NN +T AF GL L +L L R + + G
Sbjct: 96 QITYIPADAFTGLTAVISLQLN-NNRLTDISANAFTGLSALSQLFLNNNRLSSVPAGA-- 152
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
GL L+ L + N IT +GLT L L++ +++T + L L++L
Sbjct: 153 FAGLPALKQLQLN-SNRITSISATLFTGLTALTWLRLEFNQITSIPASVFTDLTGLSVLV 211
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
L +T+ + + L +L ++++ ++ F+ + + L+L N+IT
Sbjct: 212 LRSNNITSIPPYAFTGLTALSQIDVSINLITSIPAFAFAGLTAATYLDLYINQITSISDS 271
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
GLT L LN+D+ + GL L+ L L QV S +GLT L S+
Sbjct: 272 AFTGLTALTFLNMDNNRLTSILSTTFAGLTALQYLYLWSNQVTSIAPNTFAGLTALNSLQ 331
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
L I+ LS L +L+L+ IT +A +LT L +L LF RIT A
Sbjct: 332 LYDNQITSIPANAFDDLSVLNTLSLNDNLITSVPASAFANLTSLQYLSLFNNRITSIAAN 391
Query: 391 YLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITS 428
+ L SL + +T+ A L+ L L++ N+ ITS
Sbjct: 392 AFDDLTALGSLHLHTNRITNIPSTAFASLSALTQLHLYNNSITS 435
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 146/349 (41%), Gaps = 35/349 (10%)
Query: 86 LDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIH 145
L+FN I L GLS L R+N IT+ AF GL L ++D+
Sbjct: 188 LEFNQITSIPASVFTDLTGLSVLV----LRSNNITSIPPYAFTGLTALSQIDVS------ 237
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
N IT +GLT L + +++T + GL
Sbjct: 238 -------------------INLITSIPAFAFAGLTAATYLDLYINQITSISDSAFTGLTA 278
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
LT LN++ +T+ + + L +L YL L Q++ F+ + +L L L N+IT
Sbjct: 279 LTFLNMDNNRLTSILSTTFAGLTALQYLYLWSNQVTSIAPNTFAGLTALNSLQLYDNQIT 338
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
L+ L +L+L+ I L +L+ L L + ++ S LT
Sbjct: 339 SIPANAFDDLSVLNTLSLNDNLITSVPASAFANLTSLQYLSLFNNRITSIAANAFDDLTA 398
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L S++L I++ A LS+L L+L IT +SL+ +T++ ++ +I+
Sbjct: 399 LGSLHLHTNRITNIPSTAFASLSALTQLHLYNNSITSISAGTFSSLSAVTYMYMYDNQIS 458
Query: 386 DSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITS 428
A +L+ L + G +T +GLT L L++ +RITS
Sbjct: 459 SIPANTFTGMTSLKLLYLSGNQITSVSANAFSGLTALTQLSLYLNRITS 507
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 131/302 (43%), Gaps = 35/302 (11%)
Query: 117 NAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N IT+ AF GL L L+++ R T I GL L+ L + W N +T
Sbjct: 263 NQITSISDSAFTGLTALTFLNMDNNRLTSILS--TTFAGLTALQYLYL-WSNQVTSIAPN 319
Query: 175 PLSGLTNLKSLQISCSKVTD---------------------------SGIAYLKGLQKLT 207
+GLT L SLQ+ +++T S A L LQ L+
Sbjct: 320 TFAGLTALNSLQLYDNQITSIPANAFDDLSVLNTLSLNDNLITSVPASAFANLTSLQYLS 379
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
L N + A D L+ALGSL +L+ NR +++ F+ + +L L+L N IT
Sbjct: 380 LFNNRITSIAANAFDDLTALGSL-HLHTNR--ITNIPSTAFASLSALTQLHLYNNSITSI 436
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
L+ + + + I TG+ +LK L LS Q+ S SGLT L
Sbjct: 437 SAGTFSSLSAVTYMYMYDNQISSIPANTFTGMTSLKLLYLSGNQITSVSANAFSGLTALT 496
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDS 387
++L I+ S GL++L +L+L QI+ +A T LT L L L+ +IT
Sbjct: 497 QLSLYLNRITSISAAAFPGLTALLTLSLSDNQISSIPSSAFTDLTLLKFLYLYNNQITSI 556
Query: 388 GA 389
A
Sbjct: 557 AA 558
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 152/355 (42%), Gaps = 31/355 (8%)
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
G+ N T+ + NN IT+ AF GL L L +++G
Sbjct: 58 GIPNTTTQLYLNNNQITSIPTSAFPGLTVLQIL------QVYG----------------- 94
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
N IT +GLT + SLQ++ +++TD GL L+ L L +++ +
Sbjct: 95 --NQITYIPADAFTGLTAVISLQLNNNRLTDISANAFTGLSALSQLFLNNNRLSSVPAGA 152
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
+ L +L L LN +++ F+ + +L L L FN+IT LT L L L
Sbjct: 153 FAGLPALKQLQLNSNRITSISATLFTGLTALTWLRLEFNQITSIPASVFTDLTGLSVLVL 212
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
S I TGL L +++S + S +GLT ++L I+ S
Sbjct: 213 RSNNITSIPPYAFTGLTALSQIDVSINLITSIPAFAFAGLTAATYLDLYINQITSISDSA 272
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
GL++L LN+D ++T LT L +L L+ ++T L SL++
Sbjct: 273 FTGLTALTFLNMDNNRLTSILSTTFAGLTALQYLYLWSNQVTSIAPNTFAGLTALNSLQL 332
Query: 404 CGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
+T L+ L +L+++++ ITS L +L+ L+L + ++T+
Sbjct: 333 YDNQITSIPANAFDDLSVLNTLSLNDNLITSVPASAFANLTSLQYLSLFNNRITS 387
>gi|219821297|gb|ACL37776.1| internalin A [Listeria monocytogenes]
gi|219821303|gb|ACL37780.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|149242641|pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
gi|149242643|pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 182/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 63 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 116
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ LN + N +TD +KPL
Sbjct: 117 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLN--FGNQVTD--LKPL 168
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 169 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 221
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 222 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 275
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 276 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 333
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 334 SNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 391
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 392 NVSIPNTVKNVTGALIAPATISDGG 416
>gi|406833162|ref|ZP_11092756.1| hypothetical protein SpalD1_16026 [Schlesneria paludicola DSM
18645]
Length = 447
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 152/352 (43%), Gaps = 53/352 (15%)
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGI-AYLKGLQKL 206
LV L L+ L I C + D + LSGL L SL ++ S + DSG+ +K +L
Sbjct: 100 LVLFGKLSDLKKLQIFNCRTLNDEMVAQLSGLKGLTSLALTNSVINDSGVETIVKSFPEL 159
Query: 207 TLLNLEG-CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN-EI 264
T L+L +T + +S LG L L L + Q++D G ++ SK+ L+ L+L N E
Sbjct: 160 TELDLSSNTNMTNGVVKIISNLGKLQRLTLVQNQINDIGAQRLSKLQELRSLDLRGNMEA 219
Query: 265 TDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLT 324
D L + GL +L+S S + D GL L+ L+ L L D + HL+ L+
Sbjct: 220 GDMTLEVVAGLPHLQSFKHRSTAVNDSGLEYLSQGQALESLLLQDFVITDQSGPHLAKLS 279
Query: 325 NLESINL-------------------------SFTGISDGSLRKLAGLSSLKSLNLDARQ 359
L + + + D ++ L L+ L L +
Sbjct: 280 KLSQLEIFRCQGFGSDGVLALKGMGLIRLTLRDLPNVDDRAMEVFDDLPQLRRLYL--HE 337
Query: 360 ITDTGLAALTSLTGLTHLDLFG----ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG 415
+T G A L L GL L+L ++TD + NL+ L I G+TD+ +
Sbjct: 338 LTSVGDAGLKHLAGLKSLELLDIWTVPQMTDETVDVISQLPNLKDLSIRVTGVTDSAIDK 397
Query: 416 LVSLNVSNSRITSAGLRHLKPLKNLRSLTL-ESCKVTANDIKRLQSRDLPNL 466
L++ +K+L+SLT E+ +TA +K+L +R L
Sbjct: 398 LLT------------------MKSLQSLTFKENGSITAEGLKKLSARKWSKL 431
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 149/335 (44%), Gaps = 31/335 (9%)
Query: 66 GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMK 125
GS++ L+ S+L+ L C ++D + L GL LTSL+ N+ I G++
Sbjct: 92 GSNLQSEDLVLFGKLSDLKKLQIFNCRTLNDEMVAQLSGLKGLTSLALT-NSVINDSGVE 150
Query: 126 AFA-GLINLVKLDLERCTRIHGGLVN-------------------------LKGLMKLES 159
L +LDL T + G+V L L +L S
Sbjct: 151 TIVKSFPELTELDLSSNTNMTNGVVKIISNLGKLQRLTLVQNQINDIGAQRLSKLQELRS 210
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
L+++ D ++ ++GL +L+S + + V DSG+ YL Q L L L+ +T
Sbjct: 211 LDLRGNMEAGDMTLEVVAGLPHLQSFKHRSTAVNDSGLEYLSQGQALESLLLQDFVITDQ 270
Query: 220 CLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
L+ L L L + RCQ DG +G +++ + D + L L
Sbjct: 271 SGPHLAKLSKLSQLEIFRCQGFGSDGVLALKGMGLIRLTLRDLPNVDDRAMEVFDDLPQL 330
Query: 279 ESLNLDS-CGIGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLSGLTNLESINLSFTGI 336
L L +GD GL +L GL +L+ L++ + Q+ + +S L NL+ +++ TG+
Sbjct: 331 RRLYLHELTSVGDAGLKHLAGLKSLELLDIWTVPQMTDETVDVISQLPNLKDLSIRVTGV 390
Query: 337 SDGSLRKLAGLSSLKSLNLDAR-QITDTGLAALTS 370
+D ++ KL + SL+SL IT GL L++
Sbjct: 391 TDSAIDKLLTMKSLQSLTFKENGSITAEGLKKLSA 425
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 89/188 (47%), Gaps = 8/188 (4%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
VND ++ + SQG +L S+ L +TD HL S L L+ C G+ L
Sbjct: 242 AVNDSGLEYL-SQGQALESLLLQDFVITDQSGPHLAKLSKLSQLEIFRCQGFGSDGVLAL 300
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVNLKGLMKLESLN 161
+G+ L L+ R + + M+ F L L +L L T + GL +L GL LE L+
Sbjct: 301 KGM-GLIRLTLRDLPNVDDRAMEVFDDLPQLRRLYLHELTSVGDAGLKHLAGLKSLELLD 359
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYL---KGLQKLTLLNLEGCPVTA 218
I +TD + +S L NLK L I + VTDS I L K LQ LT E +TA
Sbjct: 360 IWTVPQMTDETVDVISQLPNLKDLSIRVTGVTDSAIDKLLTMKSLQSLTF--KENGSITA 417
Query: 219 ACLDSLSA 226
L LSA
Sbjct: 418 EGLKKLSA 425
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 138/305 (45%), Gaps = 16/305 (5%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI--QISDGGLEH 101
+ND ++ I L +DLS + +G++ + SNL L + QI+D G +
Sbjct: 144 INDSGVETIVKSFPELTELDLSSNTNMTNGVVKI--ISNLGKLQRLTLVQNQINDIGAQR 201
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIH-GGLVNLKGLMKLESL 160
L L L SL R N ++ AGL +L R T ++ GL L LESL
Sbjct: 202 LSKLQELRSLDLRGNMEAGDMTLEVVAGLPHLQSFK-HRSTAVNDSGLEYLSQGQALESL 260
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLK--GLQKLTLLNLEGCPVT 217
++ ITD L+ L+ L L+I C G+ LK GL +LTL +L
Sbjct: 261 LLQDF-VITDQSGPHLAKLSKLSQLEIFRCQGFGSDGVLALKGMGLIRLTLRDLPNVDDR 319
Query: 218 A-ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG-FNEITDECLVHLKGL 275
A D L L L+ L + D G + + + SL++L++ ++TDE + + L
Sbjct: 320 AMEVFDDLPQLRRLYLHEL--TSVGDAGLKHLAGLKSLELLDIWTVPQMTDETVDVISQL 377
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT-QVGSSGLRHLSGLTNLESINLSFT 334
NL+ L++ G+ D + L + +L+ L + + + GL+ LS ++L +
Sbjct: 378 PNLKDLSIRVTGVTDSAIDKLLTMKSLQSLTFKENGSITAEGLKKLSA-RKWSKLDLGTS 436
Query: 335 GISDG 339
SDG
Sbjct: 437 NQSDG 441
>gi|85679218|gb|ABC72025.1| InlA [Listeria monocytogenes]
gi|85679232|gb|ABC72032.1| InlA [Listeria monocytogenes]
Length = 794
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 97 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 150
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 151 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 202
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 203 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 255
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 256 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 309
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 310 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 367
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 368 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 425
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 426 NVSIPNTVKNVTGALIAPATISDGG 450
>gi|56797879|emb|CAH04901.1| internalin A [Listeria monocytogenes]
Length = 483
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 90 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 143
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 144 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQL--SFGNQVTD--LKPL 195
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 196 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 248
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 249 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 302
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 303 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 360
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 361 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 418
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 419 NVSIPNTVKNVTGALIAPATISDGG 443
>gi|167862040|gb|ACA05719.1| InlA [Listeria monocytogenes]
gi|194326153|emb|CAQ77235.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|46906689|ref|YP_013078.1| internalin A [Listeria monocytogenes serotype 4b str. F2365]
gi|254932755|ref|ZP_05266114.1| internalin A [Listeria monocytogenes HPB2262]
gi|405748809|ref|YP_006672275.1| internalin A [Listeria monocytogenes ATCC 19117]
gi|405751670|ref|YP_006675135.1| internalin A [Listeria monocytogenes SLCC2378]
gi|417316727|ref|ZP_12103366.1| internalin A [Listeria monocytogenes J1-220]
gi|424713328|ref|YP_007014043.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
gi|424822183|ref|ZP_18247196.1| Internalin-A [Listeria monocytogenes str. Scott A]
gi|50400895|sp|Q723K6.1|INLA_LISMF RecName: Full=Internalin-A; Flags: Precursor
gi|46879954|gb|AAT03255.1| internalin A [Listeria monocytogenes serotype 4b str. F2365]
gi|130774757|gb|ABO32393.1| InlA [Listeria monocytogenes]
gi|130774763|gb|ABO32396.1| InlA [Listeria monocytogenes]
gi|130774781|gb|ABO32405.1| InlA [Listeria monocytogenes]
gi|130774785|gb|ABO32407.1| InlA [Listeria monocytogenes]
gi|130774789|gb|ABO32409.1| InlA [Listeria monocytogenes]
gi|167861870|gb|ACA05634.1| InlA [Listeria monocytogenes]
gi|167861880|gb|ACA05639.1| InlA [Listeria monocytogenes]
gi|167861882|gb|ACA05640.1| InlA [Listeria monocytogenes]
gi|167861884|gb|ACA05641.1| InlA [Listeria monocytogenes]
gi|167861886|gb|ACA05642.1| InlA [Listeria monocytogenes]
gi|167861896|gb|ACA05647.1| InlA [Listeria monocytogenes]
gi|167861898|gb|ACA05648.1| InlA [Listeria monocytogenes]
gi|167861910|gb|ACA05654.1| InlA [Listeria monocytogenes]
gi|167861912|gb|ACA05655.1| InlA [Listeria monocytogenes]
gi|167861952|gb|ACA05675.1| InlA [Listeria monocytogenes]
gi|167861958|gb|ACA05678.1| InlA [Listeria monocytogenes]
gi|167861960|gb|ACA05679.1| InlA [Listeria monocytogenes]
gi|167861966|gb|ACA05682.1| InlA [Listeria monocytogenes]
gi|167861988|gb|ACA05693.1| InlA [Listeria monocytogenes]
gi|167861996|gb|ACA05697.1| InlA [Listeria monocytogenes]
gi|167862008|gb|ACA05703.1| InlA [Listeria monocytogenes]
gi|167862010|gb|ACA05704.1| InlA [Listeria monocytogenes]
gi|167862014|gb|ACA05706.1| InlA [Listeria monocytogenes]
gi|167862016|gb|ACA05707.1| InlA [Listeria monocytogenes]
gi|194239380|emb|CAQ76830.1| internalin A [Listeria monocytogenes]
gi|194239394|emb|CAQ76837.1| internalin A [Listeria monocytogenes]
gi|194326167|emb|CAQ77242.1| internalin A [Listeria monocytogenes]
gi|223006786|gb|ACM69350.1| internalin A [Listeria monocytogenes]
gi|223006788|gb|ACM69351.1| internalin A [Listeria monocytogenes]
gi|223006798|gb|ACM69356.1| internalin A [Listeria monocytogenes]
gi|223006804|gb|ACM69359.1| internalin A [Listeria monocytogenes]
gi|223006810|gb|ACM69362.1| internalin A [Listeria monocytogenes]
gi|293584308|gb|EFF96340.1| internalin A [Listeria monocytogenes HPB2262]
gi|294358391|gb|ADE73848.1| InlA [Listeria monocytogenes]
gi|294358403|gb|ADE73854.1| InlA [Listeria monocytogenes]
gi|298359884|gb|ADI77521.1| internalin A [Listeria monocytogenes]
gi|298359898|gb|ADI77528.1| internalin A [Listeria monocytogenes]
gi|298359902|gb|ADI77530.1| internalin A [Listeria monocytogenes]
gi|298359908|gb|ADI77533.1| internalin A [Listeria monocytogenes]
gi|298359940|gb|ADI77549.1| internalin A [Listeria monocytogenes]
gi|298359948|gb|ADI77553.1| internalin A [Listeria monocytogenes]
gi|298360056|gb|ADI77607.1| internalin A [Listeria monocytogenes]
gi|298360094|gb|ADI77626.1| internalin A [Listeria monocytogenes]
gi|298360148|gb|ADI77653.1| internalin A [Listeria monocytogenes]
gi|298360270|gb|ADI77714.1| internalin A [Listeria monocytogenes]
gi|298360288|gb|ADI77723.1| internalin A [Listeria monocytogenes]
gi|298360324|gb|ADI77741.1| internalin A [Listeria monocytogenes]
gi|298360326|gb|ADI77742.1| internalin A [Listeria monocytogenes]
gi|298360350|gb|ADI77754.1| internalin A [Listeria monocytogenes]
gi|298360362|gb|ADI77760.1| internalin A [Listeria monocytogenes]
gi|298360456|gb|ADI77807.1| internalin A [Listeria monocytogenes]
gi|298360480|gb|ADI77819.1| internalin A [Listeria monocytogenes]
gi|298360508|gb|ADI77833.1| internalin A [Listeria monocytogenes]
gi|298360520|gb|ADI77839.1| internalin A [Listeria monocytogenes]
gi|298360554|gb|ADI77856.1| internalin A [Listeria monocytogenes]
gi|298360632|gb|ADI77895.1| internalin A [Listeria monocytogenes]
gi|298360634|gb|ADI77896.1| internalin A [Listeria monocytogenes]
gi|298360662|gb|ADI77910.1| internalin A [Listeria monocytogenes]
gi|328475915|gb|EGF46639.1| internalin A [Listeria monocytogenes J1-220]
gi|332310863|gb|EGJ23958.1| Internalin-A [Listeria monocytogenes str. Scott A]
gi|340052073|emb|CBY84388.1| internalin A [Listeria monocytogenes]
gi|340052075|emb|CBY84389.1| internalin A [Listeria monocytogenes]
gi|404218009|emb|CBY69373.1| internalin A (LPXTG motif) [Listeria monocytogenes ATCC 19117]
gi|404220870|emb|CBY72233.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2378]
gi|424012512|emb|CCO63052.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
gi|443428812|gb|AGC92205.1| internalin A [Listeria monocytogenes]
gi|443428814|gb|AGC92206.1| internalin A [Listeria monocytogenes]
gi|443428816|gb|AGC92207.1| internalin A [Listeria monocytogenes]
gi|443428818|gb|AGC92208.1| internalin A [Listeria monocytogenes]
gi|443428826|gb|AGC92212.1| internalin A [Listeria monocytogenes]
gi|443428836|gb|AGC92217.1| internalin A [Listeria monocytogenes]
gi|443428840|gb|AGC92219.1| internalin A [Listeria monocytogenes]
gi|443428852|gb|AGC92225.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|350417674|ref|XP_003491538.1| PREDICTED: F-box/LRR-repeat protein 14-like [Bombus impatiens]
Length = 485
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 169/319 (52%), Gaps = 44/319 (13%)
Query: 59 LLSVDLSG-SDVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFR 114
L +++LSG ++TD GLI+ ++ + L L+ + C Q+SD L + + L NL L
Sbjct: 183 LEALNLSGCYNITDVGLINAFCQEYATLIELNLSLCKQVSDISLGRIVQYLKNLEHLELG 242
Query: 115 RNNAITAQGMKAFA-GLINLVKLDLERCTRIHG-GLVNLKGL--------MKLESLNIKW 164
IT G+ A L L +LDL C ++ G+ +L G+ + LE L+++
Sbjct: 243 GCCNITNGGLLCIAWNLKKLKRLDLRSCWQVSDLGIAHLAGVNRESAGGNLALEHLSLQD 302
Query: 165 CNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
C ++D ++ +S GLT LKS+ +S C +TDSG+ +L + L LNL C D
Sbjct: 303 CQRLSDEALRHVSIGLTTLKSINLSFCVCITDSGLKHLAKMSSLRELNLRSC-------D 355
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLES 280
++S +G + L++ G S+I SL V F ++I D+ LVH+ +GL NL+
Sbjct: 356 NISDIGMAY--------LAEGG----SRISSLDV---SFCDKIGDQALVHISQGLFNLKL 400
Query: 281 LNLDSCGIGDEGLVNLTG-LCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGI 336
L+L +C I DEG+ + L +L+ L + +++ GL ++ + +L+ I+L T I
Sbjct: 401 LSLSACQISDEGICKIAKTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCIDLYGCTRI 460
Query: 337 SDGSLRKLAGLSSLKSLNL 355
S L ++ L L +LNL
Sbjct: 461 STNGLERIMKLPQLSTLNL 479
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 120/247 (48%), Gaps = 39/247 (15%)
Query: 28 FRDC-ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD---VTDSGLIHLK-DCSN 82
R C + DL + GVN + S G +L LS D ++D L H+ +
Sbjct: 267 LRSCWQVSDLGIAHLAGVNRE------SAGGNLALEHLSLQDCQRLSDEALRHVSIGLTT 320
Query: 83 LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT 142
L+S++ +FC+ I+D GL+HL +S+L L+ R + I+ GM A
Sbjct: 321 LKSINLSFCVCITDSGLKHLAKMSSLRELNLRSCDNISDIGMAYLA-------------- 366
Query: 143 RIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQISCSKVTDSGIAYL- 200
+G ++ SL++ +C+ I D + +S GL NLK L +S +++D GI +
Sbjct: 367 ---------EGGSRISSLDVSFCDKIGDQALVHISQGLFNLKLLSLSACQISDEGICKIA 417
Query: 201 KGLQKLTLLNLEGCP-VTAACLDSLS-ALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVL 257
K L L LN+ C +T L +++ ++ L ++L C ++S +G E+ K+ L L
Sbjct: 418 KTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCIDLYGCTRISTNGLERIMKLPQLSTL 477
Query: 258 NLGFNEI 264
NLG +
Sbjct: 478 NLGLWHV 484
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 96/201 (47%), Gaps = 47/201 (23%)
Query: 272 LKGLTNLESLNLDSC-GIGDEGLVNLTGLC---------NLK-CLELSDTQVGSSGLRHL 320
LKG+ NLE+LNL C I D GL+N C NL C ++SD +G R +
Sbjct: 177 LKGVPNLEALNLSGCYNITDVGLIN--AFCQEYATLIELNLSLCKQVSDISLG----RIV 230
Query: 321 SGLTNLESINLS-FTGISDGSLRKLA-GLSSLKSLNLDA-RQITDTGLAALTSLT----- 372
L NLE + L I++G L +A L LK L+L + Q++D G+A L +
Sbjct: 231 QYLKNLEHLELGGCCNITNGGLLCIAWNLKKLKRLDLRSCWQVSDLGIAHLAGVNRESAG 290
Query: 373 ---GLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSR-IT 427
L HL L R++D LR + I GLT L S+N+S IT
Sbjct: 291 GNLALEHLSLQDCQRLSDEA---------LRHVSI--------GLTTLKSINLSFCVCIT 333
Query: 428 SAGLRHLKPLKNLRSLTLESC 448
+GL+HL + +LR L L SC
Sbjct: 334 DSGLKHLAKMSSLRELNLRSC 354
>gi|223006796|gb|ACM69355.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|404406915|ref|YP_006689630.1| internalin A [Listeria monocytogenes SLCC2376]
gi|130774829|gb|ABO32427.1| InlA [Listeria monocytogenes]
gi|167861972|gb|ACA05685.1| InlA [Listeria monocytogenes]
gi|194326147|emb|CAQ77232.1| internalin A [Listeria monocytogenes]
gi|404241064|emb|CBY62464.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2376]
Length = 800
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|167861924|gb|ACA05661.1| InlA [Listeria monocytogenes]
Length = 800
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLSDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|219821396|gb|ACL37842.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVKYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|167861906|gb|ACA05652.1| InlA [Listeria monocytogenes]
Length = 800
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|340728038|ref|XP_003402339.1| PREDICTED: f-box/LRR-repeat protein 14-like [Bombus terrestris]
Length = 485
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 169/319 (52%), Gaps = 44/319 (13%)
Query: 59 LLSVDLSG-SDVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFR 114
L +++LSG ++TD GLI+ ++ + L L+ + C Q+SD L + + L NL L
Sbjct: 183 LEALNLSGCYNITDVGLINAFCQEYATLIELNLSLCKQVSDISLGRIVQYLKNLEHLELG 242
Query: 115 RNNAITAQGMKAFA-GLINLVKLDLERCTRIHG-GLVNLKGL--------MKLESLNIKW 164
IT G+ A L L +LDL C ++ G+ +L G+ + LE L+++
Sbjct: 243 GCCNITNGGLLCIAWNLKKLKRLDLRSCWQVSDLGIAHLAGVNRESAGGNLALEHLSLQD 302
Query: 165 CNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
C ++D ++ +S GLT LKS+ +S C +TDSG+ +L + L LNL C D
Sbjct: 303 CQRLSDEALRHVSIGLTTLKSINLSFCVCITDSGLKHLAKMSSLRELNLRSC-------D 355
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLES 280
++S +G + L++ G S+I SL V F ++I D+ LVH+ +GL NL+
Sbjct: 356 NISDIGMAY--------LAEGG----SRISSLDV---SFCDKIGDQALVHISQGLFNLKL 400
Query: 281 LNLDSCGIGDEGLVNLTG-LCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGI 336
L+L +C I DEG+ + L +L+ L + +++ GL ++ + +L+ I+L T I
Sbjct: 401 LSLSACQISDEGICKIAKTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCIDLYGCTRI 460
Query: 337 SDGSLRKLAGLSSLKSLNL 355
S L ++ L L +LNL
Sbjct: 461 STNGLERIMKLPQLSTLNL 479
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 120/247 (48%), Gaps = 39/247 (15%)
Query: 28 FRDC-ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD---VTDSGLIHLK-DCSN 82
R C + DL + GVN + S G +L LS D ++D L H+ +
Sbjct: 267 LRSCWQVSDLGIAHLAGVNRE------SAGGNLALEHLSLQDCQRLSDEALRHVSIGLTT 320
Query: 83 LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT 142
L+S++ +FC+ I+D GL+HL +S+L L+ R + I+ GM A
Sbjct: 321 LKSINLSFCVCITDSGLKHLAKMSSLRELNLRSCDNISDIGMAYLA-------------- 366
Query: 143 RIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQISCSKVTDSGIAYL- 200
+G ++ SL++ +C+ I D + +S GL NLK L +S +++D GI +
Sbjct: 367 ---------EGGSRISSLDVSFCDKIGDQALVHISQGLFNLKLLSLSACQISDEGICKIA 417
Query: 201 KGLQKLTLLNLEGCP-VTAACLDSLS-ALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVL 257
K L L LN+ C +T L +++ ++ L ++L C ++S +G E+ K+ L L
Sbjct: 418 KTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCIDLYGCTRISTNGLERIMKLPQLSTL 477
Query: 258 NLGFNEI 264
NLG +
Sbjct: 478 NLGLWHV 484
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 96/201 (47%), Gaps = 47/201 (23%)
Query: 272 LKGLTNLESLNLDSC-GIGDEGLVNLTGLC---------NLK-CLELSDTQVGSSGLRHL 320
LKG+ NLE+LNL C I D GL+N C NL C ++SD +G R +
Sbjct: 177 LKGVPNLEALNLSGCYNITDVGLIN--AFCQEYATLIELNLSLCKQVSDISLG----RIV 230
Query: 321 SGLTNLESINLS-FTGISDGSLRKLA-GLSSLKSLNLDA-RQITDTGLAALTSLT----- 372
L NLE + L I++G L +A L LK L+L + Q++D G+A L +
Sbjct: 231 QYLKNLEHLELGGCCNITNGGLLCIAWNLKKLKRLDLRSCWQVSDLGIAHLAGVNRESAG 290
Query: 373 ---GLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSR-IT 427
L HL L R++D LR + I GLT L S+N+S IT
Sbjct: 291 GNLALEHLSLQDCQRLSDEA---------LRHVSI--------GLTTLKSINLSFCVCIT 333
Query: 428 SAGLRHLKPLKNLRSLTLESC 448
+GL+HL + +LR L L SC
Sbjct: 334 DSGLKHLAKMSSLRELNLRSC 354
>gi|322952092|gb|ADX21045.1| internalin A [Listeria monocytogenes]
gi|322952094|gb|ADX21046.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|130774813|gb|ABO32419.1| InlA [Listeria monocytogenes]
Length = 800
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|313485075|gb|ADR53008.1| InlA [Listeria monocytogenes]
Length = 800
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|17549135|ref|NP_522475.1| GALA protein 1 [Ralstonia solanacearum GMI1000]
gi|17431386|emb|CAD18065.1| lrr-gala family type III effector protein (gala 1) [Ralstonia
solanacearum GMI1000]
Length = 661
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 122/251 (48%), Gaps = 6/251 (2%)
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
LT L++ G + A +L+A S+ L+ + + G + +L L+LGFN I
Sbjct: 190 LTALDIRGNGIGDAGAQALAANTSITSLDASFNDIGVAGARALAANTTLTSLDLGFNAIG 249
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
DE L L T+L SL + SC IGD G L L ++L+ +G G L+ T
Sbjct: 250 DEGLQALATNTSLTSLTVGSCEIGDAGAAALANNTALTSVDLTCNHIGEEGAEGLAANTV 309
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L S++L+ ISD LAG ++L SL ++ I G L T LT LD+ I
Sbjct: 310 LTSLDLTRNSISDRGAAALAGNTTLTSLCVNFNDIYGRGARWLAENTTLTTLDISYNPIG 369
Query: 386 DSGAAYLRNFKNLRSLEICGGGL------TDAGLTGLVSLNVSNSRITSAGLRHLKPLKN 439
D GA L + LRSL + G + AG T L +L++S + I + G + L
Sbjct: 370 DWGALGLADNMTLRSLSVVAGRIGVEGARALAGNTTLTTLDISVNAIGNEGAQALAANAT 429
Query: 440 LRSLTLESCKV 450
L +L+L SC++
Sbjct: 430 LTTLSLRSCEL 440
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 161/351 (45%), Gaps = 8/351 (2%)
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC 165
+ LT+L R N I G +A A ++ LD G L L SL++ +
Sbjct: 188 TTLTALDIR-GNGIGDAGAQALAANTSITSLDASFNDIGVAGARALAANTTLTSLDLGF- 245
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N I D ++ L+ T+L SL + ++ D+G A L LT ++L + + L+
Sbjct: 246 NAIGDEGLQALATNTSLTSLTVGSCEIGDAGAAALANNTALTSVDLTCNHIGEEGAEGLA 305
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
A L L+L R +SD G + +L L + FN+I L T L +L++
Sbjct: 306 ANTVLTSLDLTRNSISDRGAAALAGNTTLTSLCVNFNDIYGRGARWLAENTTLTTLDISY 365
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
IGD G + L L+ L + ++G G R L+G T L ++++S I + + LA
Sbjct: 366 NPIGDWGALGLADNMTLRSLSVVAGRIGVEGARALAGNTTLTTLDISVNAIGNEGAQALA 425
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
++L +L+L + ++ A + T L LD+ RI +GA L + L +L + G
Sbjct: 426 ANATLTTLSLRSCELRAAAAEAFKANTTLASLDIGENRIEAAGAQALADNTALTTLRVTG 485
Query: 406 GGLTDAGLTGLVS------LNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
+ AG L + LN+S + I SAG + L +L SL + S +
Sbjct: 486 NQIGMAGAQALAANRSLTKLNISQNDIRSAGAQALAANTSLTSLDVSSASI 536
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 175/393 (44%), Gaps = 13/393 (3%)
Query: 30 DCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFN 89
+ L L LG + + D+ + +A+ +SL S+ + ++ D+G L + + L S+D
Sbjct: 235 NTTLTSLDLG-FNAIGDEGLQALATN-TSLTSLTVGSCEIGDAGAAALANNTALTSVDLT 292
Query: 90 FCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTR---IHG 146
C I + G E L + LTSL RN +I+ +G A AG L L C I+G
Sbjct: 293 -CNHIGEEGAEGLAANTVLTSLDLTRN-SISDRGAAALAGNTTLTSL----CVNFNDIYG 346
Query: 147 -GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
G L L +L+I + N I D L+ L+SL + ++ G L G
Sbjct: 347 RGARWLAENTTLTTLDISY-NPIGDWGALGLADNMTLRSLSVVAGRIGVEGARALAGNTT 405
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
LT L++ + +L+A +L L+L C+L E F +L L++G N I
Sbjct: 406 LTTLDISVNAIGNEGAQALAANATLTTLSLRSCELRAAAAEAFKANTTLASLDIGENRIE 465
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
L T L +L + IG G L +L L +S + S+G + L+ T+
Sbjct: 466 AAGAQALADNTALTTLRVTGNQIGMAGAQALAANRSLTKLNISQNDIRSAGAQALAANTS 525
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L S+++S I + LA +S+ LN++ I D G AL + LT L I
Sbjct: 526 LTSLDVSSASIGAAGAQALAANTSITWLNINDNHIGDAGAQALAAHPALTSLYACDNFIG 585
Query: 386 DSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS 418
+G L L SL I G + DAG+ L +
Sbjct: 586 TAGVQALAANTRLTSLSIWGNRIGDAGVKALAA 618
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 187/443 (42%), Gaps = 57/443 (12%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++D+ G+ + D+G L +++ SLD +F I G L + LTSL N
Sbjct: 188 TTLTALDIRGNGIGDAGAQALAANTSITSLDASFN-DIGVAGARALAANTTLTSLDLGFN 246
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
AI +G++A A +L L + C G L L S+++ CN I + + L
Sbjct: 247 -AIGDEGLQALATNTSLTSLTVGSCEIGDAGAAALANNTALTSVDLT-CNHIGEEGAEGL 304
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+ T L SL ++ + ++D G A L G LT L + + L+ +L L+++
Sbjct: 305 AANTVLTSLDLTRNSISDRGAAALAGNTTLTSLCVNFNDIYGRGARWLAENTTLTTLDIS 364
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL--- 293
+ D G + +L+ L++ I E L G T L +L++ IG+EG
Sbjct: 365 YNPIGDWGALGLADNMTLRSLSVVAGRIGVEGARALAGNTTLTTLDISVNAIGNEGAQAL 424
Query: 294 ---VNLTGL----CNLK--------------CLELSDTQVGSSGLRHLSGLTNLESINLS 332
LT L C L+ L++ + ++ ++G + L+ T L ++ ++
Sbjct: 425 AANATLTTLSLRSCELRAAAAEAFKANTTLASLDIGENRIEAAGAQALADNTALTTLRVT 484
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT------- 385
I + LA SL LN+ I G AL + T LT LD+ A I
Sbjct: 485 GNQIGMAGAQALAANRSLTKLNISQNDIRSAGAQALAANTSLTSLDVSSASIGAAGAQAL 544
Query: 386 -----------------DSGAAYLRNFKNLRSLEICGGGLTDAGL------TGLVSLNVS 422
D+GA L L SL C + AG+ T L SL++
Sbjct: 545 AANTSITWLNINDNHIGDAGAQALAAHPALTSLYACDNFIGTAGVQALAANTRLTSLSIW 604
Query: 423 NSRITSAGLRHLKPLKNLRSLTL 445
+RI AG++ L L LT+
Sbjct: 605 GNRIGDAGVKALAANTTLTKLTI 627
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 133/316 (42%), Gaps = 31/316 (9%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
G +W+ ++ ++L ++D+S + + D G + L D L+SL +I G L
Sbjct: 346 GRGARWL----AENTTLTTLDISYNPIGDWGALGLADNMTLRSLSV-VAGRIGVEGARAL 400
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
G + LT+L N AI +G +A A L L L C ++ +
Sbjct: 401 AGNTTLTTLDISVN-AIGNEGAQALAANATLTTLSLRSCE------------LRAAAAEA 447
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
N T L SL I +++ +G L LT L + G + A
Sbjct: 448 FKAN-------------TTLASLDIGENRIEAAGAQALADNTALTTLRVTGNQIGMAGAQ 494
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
+L+A SL LN+++ + G + + SL L++ I L T++ LN
Sbjct: 495 ALAANRSLTKLNISQNDIRSAGAQALAANTSLTSLDVSSASIGAAGAQALAANTSITWLN 554
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
++ IGD G L L L D +G++G++ L+ T L S+++ I D ++
Sbjct: 555 INDNHIGDAGAQALAAHPALTSLYACDNFIGTAGVQALAANTRLTSLSIWGNRIGDAGVK 614
Query: 343 KLAGLSSLKSLNLDAR 358
LA ++L L + R
Sbjct: 615 ALAANTTLTKLTIGKR 630
>gi|290987592|ref|XP_002676506.1| predicted protein [Naegleria gruberi]
gi|284090109|gb|EFC43762.1| predicted protein [Naegleria gruberi]
Length = 259
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 108/225 (48%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+ L L+I + + D +++LT L++ ++ + + L YLN+N
Sbjct: 32 MKQLTKLKIGENNIGDQNAKCFIEMKQLTSLDVYHNNISKEGAKFIGEMTQLTYLNVNTN 91
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
+ + G + SK+ L LN+G N I ++ ++ + L LN+ SC IG+ G +++
Sbjct: 92 NVGELGAKYISKLNQLITLNIGLNSIGEQGAEYISEMKQLTDLNIYSCNIGNRGANHISR 151
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
+ L L + G++++S L L +N++ + IS+ L ++G+ + L++
Sbjct: 152 MKQLISLNTGRNGLDDEGVKYISELNQLNFLNIADSNISEEGLNYISGMKQIIHLDISNN 211
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
I D G ++ + LT LD+ I + G Y+ K L L+I
Sbjct: 212 FIDDEGAEIISRMKQLTRLDISNNSIGEEGTKYISEMKKLTYLDI 256
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 26/272 (9%)
Query: 179 LTNLKSLQISCSKVT----DSGI-AYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
L N+ +L+ +CS+ DSGI +K L KL + A C + L SL
Sbjct: 6 LPNIVTLEWTCSRYQKFTFDSGIFGTMKQLTKLKIGENNIGDQNAKCFIEMKQLTSL--- 62
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
++ +S +G + ++ L LN+ N + + ++ L L +LN+ IG++G
Sbjct: 63 DVYHNNISKEGAKFIGEMTQLTYLNVNTNNVGELGAKYISKLNQLITLNIGLNSIGEQGA 122
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
++ + L L + +G+ G H+S + L S+N G+ D ++ ++ L+ L L
Sbjct: 123 EYISEMKQLTDLNIYSCNIGNRGANHISRMKQLISLNTGRNGLDDEGVKYISELNQLNFL 182
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL 413
N+ I++ GL ++ + + HLD+ I D GA + K L L+I
Sbjct: 183 NIADSNISEEGLNYISGMKQIIHLDISNNFIDDEGAEIISRMKQLTRLDI---------- 232
Query: 414 TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
SN+ I G +++ +K L L +
Sbjct: 233 --------SNNSIGEEGTKYISEMKKLTYLDI 256
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 100/214 (46%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N I D + K + L SL + + ++ G ++ + +LT LN+ V +S
Sbjct: 43 NNIGDQNAKCFIEMKQLTSLDVYHNNISKEGAKFIGEMTQLTYLNVNTNNVGELGAKYIS 102
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
L L LN+ + + G E S++ L LN+ I + H+ + L SLN
Sbjct: 103 KLNQLITLNIGLNSIGEQGAEYISEMKQLTDLNIYSCNIGNRGANHISRMKQLISLNTGR 162
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
G+ DEG+ ++ L L L ++D+ + GL ++SG+ + +++S I D ++
Sbjct: 163 NGLDDEGVKYISELNQLNFLNIADSNISEEGLNYISGMKQIIHLDISNNFIDDEGAEIIS 222
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
+ L L++ I + G ++ + LT+LD+
Sbjct: 223 RMKQLTRLDISNNSIGEEGTKYISEMKKLTYLDI 256
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 9/123 (7%)
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG 406
+ L L + I D + LT LD++ I+ GA ++ L L +
Sbjct: 32 MKQLTKLKIGENNIGDQNAKCFIEMKQLTSLDVYHNNISKEGAKFIGEMTQLTYLNVNTN 91
Query: 407 GLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV---TANDIKR 457
+ + G L L++LN+ + I G ++ +K L L + SC + AN I R
Sbjct: 92 NVGELGAKYISKLNQLITLNIGLNSIGEQGAEYISEMKQLTDLNIYSCNIGNRGANHISR 151
Query: 458 LQS 460
++
Sbjct: 152 MKQ 154
>gi|223006806|gb|ACM69360.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|428298451|ref|YP_007136757.1| small GTP-binding protein [Calothrix sp. PCC 6303]
gi|428234995|gb|AFZ00785.1| small GTP-binding protein [Calothrix sp. PCC 6303]
Length = 1408
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 191/425 (44%), Gaps = 66/425 (15%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
+ + SNL L FN IS E + LSNL L +N IT + +A A L NL +L
Sbjct: 122 IANLSNLTQLYFNSN-HISKIP-ELIAKLSNLRELHVS-SNKIT-EIPEAIAKLSNLREL 177
Query: 137 DL--ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD 194
+ + T I + NL L +L N IT+ + ++ L NL+ LQ+S +K+T+
Sbjct: 178 HVSSNQITEIPEAIANLSNLRELHV----SSNQITEIP-EAIAKLINLRELQVSSNKITE 232
Query: 195 --SGIAYLKGLQKLTLLN--LEGCPVTAACLDSLSALGSLFY-------------LNLNR 237
IA L L+KL L N + P A L +L+ L L Y +NL +
Sbjct: 233 IPEVIAKLTNLRKLYLRNNQITEIPEVIAKLTNLTQLD-LSYNQITKISEALAKLINLTQ 291
Query: 238 CQLSDDGC----EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
L ++ + +K+ +L L+L +N+IT + L LTNL L L S I +
Sbjct: 292 IILHNNKITEIPDALAKLINLTQLDLSYNQIT-KIPEALAKLTNLTQLILYSNQITEIPE 350
Query: 294 VNLTGLCNLKCLELSDTQVG--SSGLRHLSGLT--------------------NLESINL 331
V + L NL L+LS Q+ L L+ LT NL I L
Sbjct: 351 V-IAKLTNLTQLDLSYNQITKIPEALAKLTNLTQLILYSNRISEIPEALAKLINLTQIIL 409
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
S+ IS+ LA L++L L+L QIT AL L LT + L +IT+ A
Sbjct: 410 SYNRISEIP-EALAKLTNLTQLDLSYNQITKIP-EALAKLINLTQIILHSNKITEIPEA- 466
Query: 392 LRNFKNLRSLEICGGGLTD-----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
L NLR L + +T+ A LT L LN+S+++I + L L NL L L
Sbjct: 467 LAKLTNLRQLYLSYNRITEIPEALAKLTNLTQLNLSDNQIIKIP-KALAKLSNLTQLDLN 525
Query: 447 SCKVT 451
K+T
Sbjct: 526 RNKIT 530
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 134/461 (29%), Positives = 209/461 (45%), Gaps = 85/461 (18%)
Query: 50 DVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLD--FNFCIQISDGGLEHLRGLSN 107
+VIA + ++L + L + +T+ + + +NL LD +N +IS+ L L N
Sbjct: 235 EVIA-KLTNLRKLYLRNNQITEIPEV-IAKLTNLTQLDLSYNQITKISEA----LAKLIN 288
Query: 108 LTSLSFRRNNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVNLKGLMKLESLNIKWC 165
LT + NN IT + A A LINL +LDL + T+I L L L +L I +
Sbjct: 289 LTQIILH-NNKIT-EIPDALAKLINLTQLDLSYNQITKIPEALAKLTNLTQL----ILYS 342
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVT--DSGIAYLKGLQKLTLLN--LEGCPVTAACL 221
N IT+ + ++ LTNL L +S +++T +A L L +L L + + P A L
Sbjct: 343 NQITEIP-EVIAKLTNLTQLDLSYNQITKIPEALAKLTNLTQLILYSNRISEIPEALAKL 401
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD------------ECL 269
+L+ + L+ NR + E +K+ +L L+L +N+IT + +
Sbjct: 402 INLTQI----ILSYNRI---SEIPEALAKLTNLTQLDLSYNQITKIPEALAKLINLTQII 454
Query: 270 VH----------LKGLTNLESLNLDSCGIGD--EGLVNLTGLCNLKCLELSDTQVGSSGL 317
+H L LTNL L L I + E L LT NL L LSD Q+
Sbjct: 455 LHSNKITEIPEALAKLTNLRQLYLSYNRITEIPEALAKLT---NLTQLNLSDNQIIKIP- 510
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA----------- 366
+ L+ L+NL ++L+ I++ LA L++L L L +IT+ A
Sbjct: 511 KALAKLSNLTQLDLNRNKITEIP-EALAKLTNLTQLYLRNNRITEIPEALAKLTNLTQLD 569
Query: 367 ------------ALTSLTGLTHLDLFGARITDSGA--AYLRNFK--NLRSLEICGGGLTD 410
A+T LT LT L+L ++IT+ A L N NL S +I
Sbjct: 570 LGTNYNISEIPEAITKLTNLTQLNLTSSQITEIPEVIAKLTNLTQLNLTSNQIAEIPEAI 629
Query: 411 AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
A LT L L +++++IT + L NL L L S ++T
Sbjct: 630 AKLTNLTQLILTSNQITEIP-EAIAKLTNLTQLNLTSNQIT 669
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 140/305 (45%), Gaps = 47/305 (15%)
Query: 86 LDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLER--CTR 143
L +N +I + L L+NLT L+ N I KA A L NL +LDL R T
Sbjct: 478 LSYNRITEIPEA----LAKLTNLTQLNLSDNQIIKIP--KALAKLSNLTQLDLNRNKITE 531
Query: 144 IHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGL 203
I L L L +L N N IT+ + L+ LTNL L D G Y
Sbjct: 532 IPEALAKLTNLTQLYLRN----NRITEIP-EALAKLTNLTQL--------DLGTNY---- 574
Query: 204 QKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNE 263
N+ P ++++ L +L LNL Q+++ E +K+ +L LNL N+
Sbjct: 575 ------NISEIP------EAITKLTNLTQLNLTSSQITE-IPEVIAKLTNLTQLNLTSNQ 621
Query: 264 ITDECLVHLKGLTNLESLNLDSCGIGD--EGLVNLTGLCNLKCLELSDTQVGSSGLRHLS 321
I E + LTNL L L S I + E + LT L L T++ + ++
Sbjct: 622 IA-EIPEAIAKLTNLTQLILTSNQITEIPEAIAKLTNLTQLNLTSNQITKIPEA----IA 676
Query: 322 GLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG 381
LTNL + LS+ I++ +A L++L L L + QIT+ A+T LT LT LDL
Sbjct: 677 KLTNLTQLILSYNQITEIP-EAIAKLTNLTQLILTSNQITEIP-DAITKLTNLTQLDLSY 734
Query: 382 ARITD 386
RI++
Sbjct: 735 NRISE 739
>gi|290994554|ref|XP_002679897.1| leucine rich repeat domain protein [Naegleria gruberi]
gi|284093515|gb|EFC47153.1| leucine rich repeat domain protein [Naegleria gruberi]
Length = 331
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 137/287 (47%), Gaps = 10/287 (3%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQS---LDFNFCIQISDGGLE 100
++ ++++VI + LS++ ++TDS ++ L+S L F ++ D
Sbjct: 46 ISKQFLNVINERAK--LSIEFK--NITDSKFNAVRKSQFLESFTSLKFISVEEVFDIKYL 101
Query: 101 HLRGL-SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES 159
L GL NLT L N I QG K + L L ++ G + G+ KL
Sbjct: 102 ELVGLMRNLTKLCVG-GNEIGLQGAKIVSEFKQLTSLYIDSSQIGTEGAKLISGMTKLTE 160
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
L+I N + K +SG+ +L L IS S + GI + ++ LT L++ G + A
Sbjct: 161 LDIS-ANYLCAEGAKSISGMDHLTFLNISSSNIDQEGIKSISEMKNLTKLDICGNNLGAE 219
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
S+S + L YL L +G S++ L LN+ +NEI DE + + NL
Sbjct: 220 GAKSISQMKQLTYLKAYTNSLRSEGAIFISELDKLTTLNICYNEIGDEGAKAISQMPNLT 279
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
L +D IG EG +++ + L+ L++S ++G G++++ G+ +L
Sbjct: 280 DLRIDGNRIGPEGAKSISEMKQLRLLDISFNRIGEEGVKYVKGMKHL 326
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 146/317 (46%), Gaps = 32/317 (10%)
Query: 135 KLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP------LSGLTNLKSLQIS 188
K L +C+ I +N+ + + L+I++ N ITDS L T+LK IS
Sbjct: 37 KFILYKCSLISKQFLNV--INERAKLSIEFKN-ITDSKFNAVRKSQFLESFTSLKF--IS 91
Query: 189 CSKVTDSGIAYLKGLQK-LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEK 247
+V D L GL + LT L + G + +S L L ++ Q+ +G +
Sbjct: 92 VEEVFDIKYLELVGLMRNLTKLCVGGNEIGLQGAKIVSEFKQLTSLYIDSSQIGTEGAKL 151
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL 307
S + L L++ N + E + G+ +L LN+ S I EG+ +++ + NL L++
Sbjct: 152 ISGMTKLTELDISANYLCAEGAKSISGMDHLTFLNISSSNIDQEGIKSISEMKNLTKLDI 211
Query: 308 SDTQVGSSGLRHLSGLTNLESINLSFTGI-SDGSLRKLAGLSSLKSLNLDARQITDTGLA 366
+G+ G + +S + L + + S+G++ ++ L L +LN+ +I D G
Sbjct: 212 CGNNLGAEGAKSISQMKQLTYLKAYTNSLRSEGAIF-ISELDKLTTLNICYNEIGDEGAK 270
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRI 426
A++ + LT L + G RI GA + K LR L+I S +RI
Sbjct: 271 AISQMPNLTDLRIDGNRIGPEGAKSISEMKQLRLLDI------------------SFNRI 312
Query: 427 TSAGLRHLKPLKNLRSL 443
G++++K +K+L L
Sbjct: 313 GEEGVKYVKGMKHLTRL 329
>gi|219821267|gb|ACL37756.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVKYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|22347544|gb|AAM95917.1| internalin A precursor [Listeria monocytogenes]
Length = 741
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 42 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 95
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 96 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 147
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 148 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 200
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 201 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 254
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 255 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 312
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 313 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVKYKV 370
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 371 NVSIPNTVKNVTGALIAPATISDGG 395
>gi|298359896|gb|ADI77527.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|313485065|gb|ADR53005.1| InlA [Listeria monocytogenes]
Length = 801
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|290985429|ref|XP_002675428.1| predicted protein [Naegleria gruberi]
gi|284089024|gb|EFC42684.1| predicted protein [Naegleria gruberi]
Length = 451
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 156/341 (45%), Gaps = 21/341 (6%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW 164
+ LTSLS N I + K + + L LD+ G L + +L SLNI
Sbjct: 131 MKQLTSLSIS-GNGIGDEEAKLISEMKQLTSLDISANLIGDEGAKYLSEMKQLISLNIGK 189
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
D K +S + L SL IS ++V G ++ +++LT LN+ G + + +
Sbjct: 190 NEI--DEGAKYISEMKQLASLDISYTQVDVEGAKCIREMRQLTSLNICGNRIGIEGVKLI 247
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
S + L LN+ + +G + S++ L LN+ N I DE + + L SLN+
Sbjct: 248 SEMRQLTSLNIGESDIGIEGTKLISEMKQLTSLNISNNLIGDEGAKLISEMKQLISLNIR 307
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
+ I ++G ++ + L+ L +S+ ++G G++ +S + L S+N+ IS+ + +
Sbjct: 308 ANRIVNQGAKFISEMRQLRSLNISNNRIGIEGVKLISEMKQLISLNIRSNRISNEGTKLI 367
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
+ + L LN+ +I D ++ + L LD+ +I GA + K
Sbjct: 368 SEMRQLTLLNISNNEIGDEETKLISEMKQLKSLDISYNQIGIEGAKLISEMKQ------- 420
Query: 405 GGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
L SLN++++RI G + + +K L S+TL
Sbjct: 421 -----------LTSLNIADNRIGGEGAKLISEMKQLTSITL 450
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 176/407 (43%), Gaps = 39/407 (9%)
Query: 6 ISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPG--VNDKWMDVI---------AS 54
IS+Q FN + LT + F +Q Q+ VN + D + S
Sbjct: 70 ISKQFFNVIKERSKLTIQFKKKFTKKRVQLFLKSQFMNCIVNVTYSDWLLDSFEEAKFIS 129
Query: 55 QGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
+ L S+ +SG+ + D + + L SLD + + I D G ++L + L SL+
Sbjct: 130 KMKQLTSLSISGNGIGDEEAKLISEMKQLTSLDISANL-IGDEGAKYLSEMKQLISLNIG 188
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
+N +G K + + L LD+ ++++ CI +
Sbjct: 189 KNE--IDEGAKYISEMKQLASLDISYT-----------------QVDVEGAKCIRE---- 225
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
+ L SL I +++ G+ + +++LT LN+ + +S + L LN
Sbjct: 226 ----MRQLTSLNICGNRIGIEGVKLISEMRQLTSLNIGESDIGIEGTKLISEMKQLTSLN 281
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
++ + D+G + S++ L LN+ N I ++ + + L SLN+ + IG EG+
Sbjct: 282 ISNNLIGDEGAKLISEMKQLISLNIRANRIVNQGAKFISEMRQLRSLNISNNRIGIEGVK 341
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
++ + L L + ++ + G + +S + L +N+S I D + ++ + LKSL+
Sbjct: 342 LISEMKQLISLNIRSNRISNEGTKLISEMRQLTLLNISNNEIGDEETKLISEMKQLKSLD 401
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
+ QI G ++ + LT L++ RI GA + K L S+
Sbjct: 402 ISYNQIGIEGAKLISEMKQLTSLNIADNRIGGEGAKLISEMKQLTSI 448
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 138/279 (49%), Gaps = 15/279 (5%)
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN 258
++ +++LT L++ G + +S + L L+++ + D+G + S++ L LN
Sbjct: 127 FISKMKQLTSLSISGNGIGDEEAKLISEMKQLTSLDISANLIGDEGAKYLSEMKQLISLN 186
Query: 259 LGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
+G NEI DE ++ + L SL++ + EG + + L L + ++G G++
Sbjct: 187 IGKNEI-DEGAKYISEMKQLASLDISYTQVDVEGAKCIREMRQLTSLNICGNRIGIEGVK 245
Query: 319 HLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 378
+S + L S+N+ + I + ++ + L SLN+ I D G ++ + L L+
Sbjct: 246 LISEMRQLTSLNIGESDIGIEGTKLISEMKQLTSLNISNNLIGDEGAKLISEMKQLISLN 305
Query: 379 LFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLR 432
+ RI + GA ++ + LRSL I + G + L+SLN+ ++RI++ G +
Sbjct: 306 IRANRIVNQGAKFISEMRQLRSLNISNNRIGIEGVKLISEMKQLISLNIRSNRISNEGTK 365
Query: 433 HLKPLKNLRSLTL-------ESCKVTANDIKRLQSRDLP 464
+ ++ L L + E K+ + ++K+L+S D+
Sbjct: 366 LISEMRQLTLLNISNNEIGDEETKLIS-EMKQLKSLDIS 403
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 149/313 (47%), Gaps = 29/313 (9%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSGSDV-----------------------TDSGLIHLKD 79
G+ D+ +I S+ L S+D+S + + D G ++ +
Sbjct: 143 GIGDEEAKLI-SEMKQLTSLDISANLIGDEGAKYLSEMKQLISLNIGKNEIDEGAKYISE 201
Query: 80 CSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL- 138
L SLD ++ Q+ G + +R + LTSL+ N I +G+K + + L L++
Sbjct: 202 MKQLASLDISYT-QVDVEGAKCIREMRQLTSLNI-CGNRIGIEGVKLISEMRQLTSLNIG 259
Query: 139 ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIA 198
E I G + + + +L SLNI N I D K +S + L SL I +++ + G
Sbjct: 260 ESDIGIEGTKL-ISEMKQLTSLNIS-NNLIGDEGAKLISEMKQLISLNIRANRIVNQGAK 317
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN 258
++ +++L LN+ + + +S + L LN+ ++S++G + S++ L +LN
Sbjct: 318 FISEMRQLRSLNISNNRIGIEGVKLISEMKQLISLNIRSNRISNEGTKLISEMRQLTLLN 377
Query: 259 LGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
+ NEI DE + + L+SL++ IG EG ++ + L L ++D ++G G +
Sbjct: 378 ISNNEIGDEETKLISEMKQLKSLDISYNQIGIEGAKLISEMKQLTSLNIADNRIGGEGAK 437
Query: 319 HLSGLTNLESINL 331
+S + L SI L
Sbjct: 438 LISEMKQLTSITL 450
>gi|219821288|gb|ACL37770.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVKYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|112959522|gb|ABI27288.1| truncated internalin A [Listeria monocytogenes]
Length = 538
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 31 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 84
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 85 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQL--SFGNQVTD--LKPL 136
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 137 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 189
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 190 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 243
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 244 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 301
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 302 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 359
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 360 NVSIPNTVKNVTGALIAPATISDGG 384
>gi|297171918|gb|ADI22905.1| hypothetical protein [uncultured Rhizobium sp. HF0500_35F13]
Length = 307
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 2/165 (1%)
Query: 198 AYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
A + G++ +T+ +T L+ L LG++ YL+L+ + DDG +K+ L+VL
Sbjct: 41 AQVSGIRSVTV-RFTNSALTGKDLEPLGKLGTVHYLDLSDTSVGDDGMVHINKLEGLQVL 99
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGL 317
L EITD L L++L L +GD + L L L+++ QV SGL
Sbjct: 100 VLSGTEITDAGFSQLSNLSDLNQLTASEL-MGDGTMAALASATKLNFLDMTGGQVTDSGL 158
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
HLSG+ NL+ + LS T I+D L L ++ L+ L L+ +ITD
Sbjct: 159 SHLSGMKNLKRLTLSRTAITDKGLEHLQSITVLQDLQLNNTKITD 203
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 95/173 (54%), Gaps = 8/173 (4%)
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L + L+LSDT VG G+ H++ L L+ + LS T I+D +L+ LS L L +
Sbjct: 69 LGTVHYLDLSDTSVGDDGMVHINKLEGLQVLVLSGTEITDAGFSQLSNLSDLNQLTA-SE 127
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS 418
+ D +AAL S T L LD+ G ++TDSG ++L KNL+ L + +TD GL L S
Sbjct: 128 LMGDGTMAALASATKLNFLDMTGGQVTDSGLSHLSGMKNLKRLTLSRTAITDKGLEHLQS 187
Query: 419 LNV------SNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 465
+ V +N++IT GL L+ L NL L + T N + +LQ+ LP+
Sbjct: 188 ITVLQDLQLNNTKITDEGLLLLEGLSNLNLLAITDTGTTLNGVTKLQAA-LPD 239
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Query: 157 LESLNIKWCN-CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 215
+ S+ +++ N +T D++PL L + L +S + V D G+ ++ L+ L +L L G
Sbjct: 46 IRSVTVRFTNSALTGKDLEPLGKLGTVHYLDLSDTSVGDDGMVHINKLEGLQVLVLSGTE 105
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
+T A LS L L L + + D + L L++ ++TD L HL G+
Sbjct: 106 ITDAGFSQLSNLSDLNQLTASEL-MGDGTMAALASATKLNFLDMTGGQVTDSGLSHLSGM 164
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQV 312
NL+ L L I D+GL +L + L+ L+L++T++
Sbjct: 165 KNLKRLTLSRTAITDKGLEHLQSITVLQDLQLNNTKI 201
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 80/147 (54%), Gaps = 1/147 (0%)
Query: 264 ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL 323
+T + L L L + L+L +GD+G+V++ L L+ L LS T++ +G LS L
Sbjct: 58 LTGKDLEPLGKLGTVHYLDLSDTSVGDDGMVHINKLEGLQVLVLSGTEITDAGFSQLSNL 117
Query: 324 TNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGAR 383
++L + S + DG++ LA + L L++ Q+TD+GL+ L+ + L L L
Sbjct: 118 SDLNQLTASEL-MGDGTMAALASATKLNFLDMTGGQVTDSGLSHLSGMKNLKRLTLSRTA 176
Query: 384 ITDSGAAYLRNFKNLRSLEICGGGLTD 410
ITD G +L++ L+ L++ +TD
Sbjct: 177 ITDKGLEHLQSITVLQDLQLNNTKITD 203
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 323 LTNLESINLSFT--GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
++ + S+ + FT ++ L L L ++ L+L + D G+ + L GL L L
Sbjct: 43 VSGIRSVTVRFTNSALTGKDLEPLGKLGTVHYLDLSDTSVGDDGMVHINKLEGLQVLVLS 102
Query: 381 GARITDSGAAYLRNFKNLRSL---EICGGGLTDAGLTGLVSLN---VSNSRITSAGLRHL 434
G ITD+G + L N +L L E+ G G T A L LN ++ ++T +GL HL
Sbjct: 103 GTEITDAGFSQLSNLSDLNQLTASELMGDG-TMAALASATKLNFLDMTGGQVTDSGLSHL 161
Query: 435 KPLKNLRSLTLESCKVTANDIKRLQS 460
+KNL+ LTL +T ++ LQS
Sbjct: 162 SGMKNLKRLTLSRTAITDKGLEHLQS 187
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
+DLS + V D G++H+ LQ L + +I+D G L LS+L L+ +
Sbjct: 75 LDLSDTSVGDDGMVHINKLEGLQVLVLS-GTEITDAGFSQLSNLSDLNQLTASE---LMG 130
Query: 122 QG-MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
G M A A L LD+ GL +L G+ L+ L + ITD ++ L +T
Sbjct: 131 DGTMAALASATKLNFLDMTGGQVTDSGLSHLSGMKNLKRLTLSRT-AITDKGLEHLQSIT 189
Query: 181 NLKSLQISCSKVTD 194
L+ LQ++ +K+TD
Sbjct: 190 VLQDLQLNNTKITD 203
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
+ D M +AS + L +D++G VTDSGL HL NL+ L + I+D GLEHL+
Sbjct: 129 MGDGTMAALAS-ATKLNFLDMTGGQVTDSGLSHLSGMKNLKRLTLSRT-AITDKGLEHLQ 186
Query: 104 GLSNLTSLSFRRNNAIT 120
++ L L N IT
Sbjct: 187 SITVLQDLQL-NNTKIT 202
>gi|223006802|gb|ACM69358.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|321455314|gb|EFX66450.1| hypothetical protein DAPPUDRAFT_302690 [Daphnia pulex]
Length = 397
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 157/316 (49%), Gaps = 43/316 (13%)
Query: 61 SVDLSGS-DVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRN 116
S+DLSG +VTD G+ H D L+ L+ + C QI+D L L + L L
Sbjct: 98 SLDLSGCFNVTDIGIAHALTADVPTLKRLNLSLCKQITDSSLSKLAQYCRQLQELDLGGC 157
Query: 117 NAITAQGMKAFA-GLINLVKLDLERCTRIHG-GLVNLKGL-------MKLESLNIKWCNC 167
+T G+ A GL +L L+L C + G+ +L GL + LE L ++ C
Sbjct: 158 CNVTNAGLLLIAWGLKSLKSLNLRSCWHVSDLGIASLAGLGSDAEGNLALEHLGLQDCQK 217
Query: 168 ITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
+TD + +S GL LKS+ +S C ++DSG+ YL + L LNL C D++S
Sbjct: 218 LTDDALMHVSTGLKQLKSINLSFCLSISDSGLKYLAKMPSLAELNLRSC-------DNIS 270
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNL 283
+G + YL E S+I SL V F + I D+ +VH+ +GL +L+ L+L
Sbjct: 271 DVG-MAYL-----------AEGGSRITSLDV---SFCDRIDDQAVVHVAQGLVHLKQLSL 315
Query: 284 DSCGIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDG 339
+C + DEGL+ + L +L+ L + +++ ++ ++ L L I+L T I+
Sbjct: 316 SACHVSDEGLIRVALSLLDLQTLNIGQCSRITDRSIQAVADHLRKLRCIDLYGCTKITTS 375
Query: 340 SLRKLAGLSSLKSLNL 355
L K+ L L LNL
Sbjct: 376 GLEKIMKLPELSVLNL 391
>gi|22347570|gb|AAM95930.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 42 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 95
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 96 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 147
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 148 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 200
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 201 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 254
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 255 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 312
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 313 YNNKVSDVSSLASLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 370
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 371 NVSIPNTVKNVTGALIAPATISDGG 395
>gi|219821264|gb|ACL37754.1| internalin A [Listeria monocytogenes]
gi|219821306|gb|ACL37782.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|194755888|ref|XP_001960211.1| GF13252 [Drosophila ananassae]
gi|190621509|gb|EDV37033.1| GF13252 [Drosophila ananassae]
Length = 492
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 162/331 (48%), Gaps = 68/331 (20%)
Query: 7 SQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG 66
S +FN LV R + +V + + R +L+DL LG +L S++LSG
Sbjct: 208 SPSLFNCLV-KRGIKKVQILSLRR-SLKDLVLGV----------------PALTSLNLSG 249
Query: 67 S-DVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGL----EHLRGLSNLTSLSFRRNNAI 119
+V D L H D NL++LD + C QI+D L +HLR NL +L I
Sbjct: 250 CFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGRIAQHLR---NLETLELGGCCNI 306
Query: 120 TAQGMKAFA-GLINLVKLDLERCTRIH-GGLVNLKGL--------MKLESLNIKWCNCIT 169
T G+ A GL L L+L C I G+ +L G ++LE L ++ C ++
Sbjct: 307 TNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLS 366
Query: 170 DSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
D + ++ GLT+LKS+ +S C VTDSG+ +L + KL LNL C D++S +
Sbjct: 367 DEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC-------DNISDI 419
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDS 285
G + L++ G S I SL V F ++I+D+ L H+ +GL L SL+L+
Sbjct: 420 GMAY--------LTEGG----SGINSLDV---SFCDKISDQALTHIAQGLYRLRSLSLNQ 464
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
C I D G++ + + EL + +G +
Sbjct: 465 CQITDHGMLKIAKALH----ELENLNIGHAA 491
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 57/276 (20%)
Query: 202 GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF 261
G+ LT LNL GC A ++ LG F ++L +LK L+L
Sbjct: 238 GVPALTSLNLSGC-FNVADMN----LGHAFSVDL----------------PNLKTLDLSL 276
Query: 262 -NEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLEL-SDTQVGSSG 316
+ITD L + + L NLE+L L C I + GL+ + GL LK L L S + G
Sbjct: 277 CKQITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQG 336
Query: 317 LRHLSGLTNLES---INLSFTGI------SDGSLRKLA-GLSSLKSLNLD-ARQITDTGL 365
+ HL+G + + + L + G+ SD +L +A GL+SLKS+NL +TD+GL
Sbjct: 337 IGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGL 396
Query: 366 AALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN- 423
L + L L+L I+D G AYL T+ G +G+ SL+VS
Sbjct: 397 KHLARMPKLEQLNLRSCDNISDIGMAYL----------------TEGG-SGINSLDVSFC 439
Query: 424 SRITSAGLRHL-KPLKNLRSLTLESCKVTANDIKRL 458
+I+ L H+ + L LRSL+L C++T + + ++
Sbjct: 440 DKISDQALTHIAQGLYRLRSLSLNQCQITDHGMLKI 475
>gi|219821300|gb|ACL37778.1| internalin A [Listeria monocytogenes]
gi|219821378|gb|ACL37830.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|198432493|ref|XP_002130800.1| PREDICTED: similar to F-box and leucine-rich repeat protein 13
[Ciona intestinalis]
Length = 798
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 196/420 (46%), Gaps = 49/420 (11%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCS-NLQSLDFNFC 91
+QDL + GVND+ M IA +LL +++S +++TD L L C N+Q L +C
Sbjct: 321 VQDLNFSECKGVNDEVMRTIAESCPTLLYLNISHTEITDGTLRTLSRCCLNMQYLSLAYC 380
Query: 92 IQISDGGLEHL---RGLSNLTSLSFRRNNAITAQGMKAFA----GLINLVKLDL------ 138
+ +D GL ++ +G LT + F ITAQG + A L ++V D+
Sbjct: 381 SKYTDRGLHYMASGKGCRKLTYIDFSGCLQITAQGFRHVAHGCTSLQSIVLNDMPSLTDS 440
Query: 139 ------ERCTRIHG----GLVNLKGLM--------KLESLNIKWCNCITDSDMKPLSGLT 180
E+CT + G NL + KL+ L I+ ITD+ K L +
Sbjct: 441 CIISLVEKCTNLRSVSLIGSPNLTDMAFKALAQAKKLQKLRIESNQNITDNTFKTLGKMC 500
Query: 181 NL--KSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGS---LFYLN 234
+ C ++TD + L L+ + +LNL C ++ + + + S + +N
Sbjct: 501 PYIGHFYVVDCQRLTDMMLKALSPLRSIIVLNLADCVRISDSGVRQMVEGPSGSKIREMN 560
Query: 235 LNRC-QLSDDGCEKFS-KIGSLKVLNLGFNE-ITDECLVHLKGLTNLESLNLDSCGIGDE 291
L C ++SD + + + SL L L F E +TD + L + L ++L I D+
Sbjct: 561 LTNCVRVSDVSLLRVAQRCHSLTHLCLCFCEHVTDAGIELLGSMPALLHVDLSGTNIKDQ 620
Query: 292 GLVNLTGLCNLKCLELSDTQ-VGSSGLRHL-SGLTNLESINLSF-TGISDGSLRKLAGLS 348
GL +L ++ + +S+ Q + GL+ +T L+++++S +SD +++ LA
Sbjct: 621 GLASLGVNSRIRSVVMSECQGITDLGLQKFCQKVTELDTLDVSHCMSLSDAAIKNLAFCC 680
Query: 349 S-LKSLNLDA-RQITDTGLAALTSLTGLTH-LDLFGA-RITDSGAAYLRN-FKNLRSLEI 403
L SLN+ +TD + L+ + H L+L G I+D YLR K LRSL I
Sbjct: 681 RMLTSLNVAGCPLLTDLSIQYLSGVCHYIHFLNLSGCIHISDRAVKYLRKGCKQLRSLTI 740
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 189/448 (42%), Gaps = 71/448 (15%)
Query: 29 RDCALQ-----DLC-LGQYPGVNDKWMDVI-ASQGSSLLSVDLSGSDVTDSGLIH-LKDC 80
R CA+Q DL LG+ V W + A S L+ S+VTD +I L+ C
Sbjct: 233 RKCAIQIFSFLDLMDLGRCARVCRAWKVITGAPTLWSHLNFSKVRSNVTDKMVIQCLQKC 292
Query: 81 -SNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE 139
L L+ C + + + N+ L+F + + M+ A E
Sbjct: 293 RPYLVHLNLQQCYSVHWPTFKSISECRNVQDLNFSECKGVNDEVMRTIA----------E 342
Query: 140 RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT-NLKSLQIS-CSKVTDSGI 197
C L LNI ITD ++ LS N++ L ++ CSK TD G+
Sbjct: 343 SCP-------------TLLYLNISHTE-ITDGTLRTLSRCCLNMQYLSLAYCSKYTDRGL 388
Query: 198 AYL---KGLQKLTLLNLEGC-PVTAACLDSLS-ALGSLFYLNLNRCQLSDDGC-----EK 247
Y+ KG +KLT ++ GC +TA ++ SL + LN D C EK
Sbjct: 389 HYMASGKGCRKLTYIDFSGCLQITAQGFRHVAHGCTSLQSIVLNDMPSLTDSCIISLVEK 448
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS-CGIGDEGLVNLTGLCN----- 301
+ + S+ ++ G +TD L L+ L ++S I D L +C
Sbjct: 449 CTNLRSVSLI--GSPNLTDMAFKALAQAKKLQKLRIESNQNITDNTFKTLGKMCPYIGHF 506
Query: 302 --LKCLELSDTQVGSSGLRHLSGLTNLESINLS-FTGISDGSLRKL---AGLSSLKSLNL 355
+ C L+D L+ LS L ++ +NL+ ISD +R++ S ++ +NL
Sbjct: 507 YVVDCQRLTDMM-----LKALSPLRSIIVLNLADCVRISDSGVRQMVEGPSGSKIREMNL 561
Query: 356 -DARQITDTGLAALTS-LTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
+ +++D L + LTHL L F +TD+G L + L +++ G + D G
Sbjct: 562 TNCVRVSDVSLLRVAQRCHSLTHLCLCFCEHVTDAGIELLGSMPALLHVDLSGTNIKDQG 621
Query: 413 LTGLVSLNVSNSRITSAGLRHLKPLKNL 440
L SL V NSRI S + + + +L
Sbjct: 622 LA---SLGV-NSRIRSVVMSECQGITDL 645
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 189/452 (41%), Gaps = 76/452 (16%)
Query: 77 LKDCSNLQSLDFNFC-------------------------IQISDGGLEHL-RGLSNLTS 110
+ +C N+Q L+F+ C +I+DG L L R N+
Sbjct: 315 ISECRNVQDLNFSECKGVNDEVMRTIAESCPTLLYLNISHTEITDGTLRTLSRCCLNMQY 374
Query: 111 LSFRRNNAITAQGMKAFA---GLINLVKLDLERCTRI--HGGLVNLKGLMKLESLNIKWC 165
LS + T +G+ A G L +D C +I G G L+S+ +
Sbjct: 375 LSLAYCSKYTDRGLHYMASGKGCRKLTYIDFSGCLQITAQGFRHVAHGCTSLQSIVLNDM 434
Query: 166 NCITDSDMKPL-SGLTNLKSLQ-ISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLD 222
+TDS + L TNL+S+ I +TD L +KL L +E +T
Sbjct: 435 PSLTDSCIISLVEKCTNLRSVSLIGSPNLTDMAFKALAQAKKLQKLRIESNQNITDNTFK 494
Query: 223 SL----SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG-FNEITD---ECLVHLKG 274
+L +G + ++ R L+D + S + S+ VLNL I+D +V
Sbjct: 495 TLGKMCPYIGHFYVVDCQR--LTDMMLKALSPLRSIIVLNLADCVRISDSGVRQMVEGPS 552
Query: 275 LTNLESLNLDSC-GIGDEGLV-------NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
+ + +NL +C + D L+ +LT LC C ++D +G+ L + L
Sbjct: 553 GSKIREMNLTNCVRVSDVSLLRVAQRCHSLTHLCLCFCEHVTD-----AGIELLGSMPAL 607
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ-ITDTGLAAL-TSLTGLTHLDLFGARI 384
++LS T I D L L S ++S+ + Q ITD GL +T L LD+ +
Sbjct: 608 LHVDLSGTNIKDQGLASLGVNSRIRSVVMSECQGITDLGLQKFCQKVTELDTLDV--SHC 665
Query: 385 TDSGAAYLRNF----KNLRSLEICGGG-LTDAGLTGLVS-------LNVSNS-RITSAGL 431
A ++N + L SL + G LTD + L LN+S I+ +
Sbjct: 666 MSLSDAAIKNLAFCCRMLTSLNVAGCPLLTDLSIQYLSGVCHYIHFLNLSGCIHISDRAV 725
Query: 432 RHL-KPLKNLRSLTLESCK-VTANDIKRLQSR 461
++L K K LRSLT+ C+ +T +RL SR
Sbjct: 726 KYLRKGCKQLRSLTILYCRSITKITAQRLASR 757
>gi|219821312|gb|ACL37786.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 311 YNNKVSDVSSLASLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|85679220|gb|ABC72026.1| InlA [Listeria monocytogenes]
Length = 794
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 97 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 150
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 151 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 202
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 203 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 255
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 256 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 309
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 310 SPLAGLAALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 367
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 368 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKT 425
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 426 NVSIPNTVKNVTGALIAPATISDGG 450
>gi|219821363|gb|ACL37820.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DINPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|322952083|gb|ADX21041.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|167862002|gb|ACA05700.1| InlA [Listeria monocytogenes]
Length = 800
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|112961640|gb|ABI28446.1| truncated internalin A [Listeria monocytogenes]
gi|112961643|gb|ABI28448.1| truncated internalin A [Listeria monocytogenes]
gi|112961661|gb|ABI28460.1| truncated internalin A [Listeria monocytogenes]
Length = 556
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 49 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 102
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 103 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQL--SFGNQVTD--LKPL 154
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 155 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 207
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 208 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 261
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 262 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 319
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 320 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 377
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 378 NVSIPNTVKNVTGALIAPATISDGG 402
>gi|340052071|emb|CBY84387.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|112959500|gb|ABI27277.1| internalin A [Listeria monocytogenes]
gi|112959502|gb|ABI27278.1| internalin A [Listeria monocytogenes]
gi|112959510|gb|ABI27282.1| internalin A [Listeria monocytogenes]
gi|112959512|gb|ABI27283.1| internalin A [Listeria monocytogenes]
gi|112959524|gb|ABI27289.1| internalin A [Listeria monocytogenes]
gi|112959530|gb|ABI27292.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 35 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 88
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 89 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 140
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 141 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 193
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 194 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 247
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 248 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 305
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 306 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 363
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 364 NVSIPNTVKNVTGALIAPATISDGG 388
>gi|22347552|gb|AAM95921.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 42 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 95
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 96 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 147
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 148 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 200
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 201 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 254
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 255 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 312
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 313 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 370
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 371 NVSIPNTVKNVTGALIAPATISDGG 395
>gi|219821309|gb|ACL37784.1| internalin A [Listeria monocytogenes]
gi|219821393|gb|ACL37840.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|219821369|gb|ACL37824.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|112961610|gb|ABI28426.1| internalin A [Listeria monocytogenes]
gi|112961613|gb|ABI28428.1| internalin A [Listeria monocytogenes]
gi|112961625|gb|ABI28436.1| internalin A [Listeria monocytogenes]
gi|112961628|gb|ABI28438.1| internalin A [Listeria monocytogenes]
gi|112961631|gb|ABI28440.1| internalin A [Listeria monocytogenes]
gi|112961634|gb|ABI28442.1| internalin A [Listeria monocytogenes]
gi|112961670|gb|ABI28466.1| internalin A [Listeria monocytogenes]
gi|112961673|gb|ABI28468.1| internalin A [Listeria monocytogenes]
gi|112961676|gb|ABI28470.1| internalin A [Listeria monocytogenes]
gi|112961688|gb|ABI28478.1| internalin A [Listeria monocytogenes]
gi|112961703|gb|ABI28488.1| internalin A [Listeria monocytogenes]
gi|112961712|gb|ABI28494.1| internalin A [Listeria monocytogenes]
gi|112961715|gb|ABI28496.1| internalin A [Listeria monocytogenes]
gi|112961724|gb|ABI28502.1| internalin A [Listeria monocytogenes]
gi|112961733|gb|ABI28508.1| internalin A [Listeria monocytogenes]
gi|112961736|gb|ABI28510.1| internalin A [Listeria monocytogenes]
gi|112961739|gb|ABI28512.1| internalin A [Listeria monocytogenes]
gi|112961742|gb|ABI28514.1| internalin A [Listeria monocytogenes]
gi|112961745|gb|ABI28516.1| internalin A [Listeria monocytogenes]
gi|112961754|gb|ABI28522.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 49 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 102
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 103 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 154
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 155 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 207
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 208 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 261
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 262 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 319
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 320 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 377
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 378 NVSIPNTVKNVTGALIAPATISDGG 402
>gi|219821291|gb|ACL37772.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNKVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKA 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|313485058|gb|ADR53003.1| InlA [Listeria monocytogenes]
Length = 765
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|298359724|gb|ADI77441.1| truncated internalin A [Listeria monocytogenes]
gi|298359728|gb|ADI77443.1| truncated internalin A [Listeria monocytogenes]
gi|298359760|gb|ADI77459.1| truncated internalin A [Listeria monocytogenes]
gi|298359768|gb|ADI77463.1| truncated internalin A [Listeria monocytogenes]
gi|298359778|gb|ADI77468.1| truncated internalin A [Listeria monocytogenes]
gi|298359784|gb|ADI77471.1| truncated internalin A [Listeria monocytogenes]
gi|298359796|gb|ADI77477.1| truncated internalin A [Listeria monocytogenes]
gi|298359800|gb|ADI77479.1| truncated internalin A [Listeria monocytogenes]
gi|298359816|gb|ADI77487.1| truncated internalin A [Listeria monocytogenes]
gi|298359840|gb|ADI77499.1| truncated internalin A [Listeria monocytogenes]
gi|298359850|gb|ADI77504.1| truncated internalin A [Listeria monocytogenes]
gi|298359852|gb|ADI77505.1| truncated internalin A [Listeria monocytogenes]
gi|298359860|gb|ADI77509.1| truncated internalin A [Listeria monocytogenes]
gi|298359916|gb|ADI77537.1| truncated internalin A [Listeria monocytogenes]
gi|298359928|gb|ADI77543.1| truncated internalin A [Listeria monocytogenes]
gi|298359936|gb|ADI77547.1| truncated internalin A [Listeria monocytogenes]
gi|298359962|gb|ADI77560.1| truncated internalin A [Listeria monocytogenes]
gi|298359996|gb|ADI77577.1| truncated internalin A [Listeria monocytogenes]
gi|298360016|gb|ADI77587.1| truncated internalin A [Listeria monocytogenes]
gi|298360018|gb|ADI77588.1| truncated internalin A [Listeria monocytogenes]
gi|298360022|gb|ADI77590.1| truncated internalin A [Listeria monocytogenes]
gi|298360024|gb|ADI77591.1| truncated internalin A [Listeria monocytogenes]
gi|298360046|gb|ADI77602.1| truncated internalin A [Listeria monocytogenes]
gi|298360048|gb|ADI77603.1| truncated internalin A [Listeria monocytogenes]
gi|298360058|gb|ADI77608.1| truncated internalin A [Listeria monocytogenes]
gi|298360062|gb|ADI77610.1| truncated internalin A [Listeria monocytogenes]
gi|298360088|gb|ADI77623.1| truncated internalin A [Listeria monocytogenes]
gi|298360120|gb|ADI77639.1| truncated internalin A [Listeria monocytogenes]
gi|298360152|gb|ADI77655.1| truncated internalin A [Listeria monocytogenes]
gi|298360168|gb|ADI77663.1| truncated internalin A [Listeria monocytogenes]
gi|298360204|gb|ADI77681.1| truncated internalin A [Listeria monocytogenes]
gi|298360210|gb|ADI77684.1| truncated internalin A [Listeria monocytogenes]
gi|298360224|gb|ADI77691.1| truncated internalin A [Listeria monocytogenes]
gi|298360248|gb|ADI77703.1| truncated internalin A [Listeria monocytogenes]
gi|298360250|gb|ADI77704.1| truncated internalin A [Listeria monocytogenes]
gi|298360272|gb|ADI77715.1| truncated internalin A [Listeria monocytogenes]
gi|298360308|gb|ADI77733.1| truncated internalin A [Listeria monocytogenes]
gi|298360340|gb|ADI77749.1| truncated internalin A [Listeria monocytogenes]
gi|298360382|gb|ADI77770.1| truncated internalin A [Listeria monocytogenes]
gi|298360392|gb|ADI77775.1| truncated internalin A [Listeria monocytogenes]
gi|298360408|gb|ADI77783.1| truncated internalin A [Listeria monocytogenes]
gi|298360418|gb|ADI77788.1| truncated internalin A [Listeria monocytogenes]
gi|298360430|gb|ADI77794.1| truncated internalin A [Listeria monocytogenes]
gi|298360438|gb|ADI77798.1| truncated internalin A [Listeria monocytogenes]
gi|298360444|gb|ADI77801.1| truncated internalin A [Listeria monocytogenes]
gi|298360446|gb|ADI77802.1| truncated internalin A [Listeria monocytogenes]
gi|298360476|gb|ADI77817.1| truncated internalin A [Listeria monocytogenes]
gi|298360482|gb|ADI77820.1| truncated internalin A [Listeria monocytogenes]
gi|298360484|gb|ADI77821.1| truncated internalin A [Listeria monocytogenes]
gi|298360486|gb|ADI77822.1| truncated internalin A [Listeria monocytogenes]
gi|298360490|gb|ADI77824.1| truncated internalin A [Listeria monocytogenes]
gi|298360512|gb|ADI77835.1| truncated internalin A [Listeria monocytogenes]
gi|298360526|gb|ADI77842.1| truncated internalin A [Listeria monocytogenes]
gi|298360534|gb|ADI77846.1| truncated internalin A [Listeria monocytogenes]
gi|298360574|gb|ADI77866.1| truncated internalin A [Listeria monocytogenes]
gi|298360584|gb|ADI77871.1| truncated internalin A [Listeria monocytogenes]
gi|298360618|gb|ADI77888.1| truncated internalin A [Listeria monocytogenes]
gi|298360622|gb|ADI77890.1| truncated internalin A [Listeria monocytogenes]
gi|298360626|gb|ADI77892.1| truncated internalin A [Listeria monocytogenes]
gi|298360628|gb|ADI77893.1| truncated internalin A [Listeria monocytogenes]
gi|298360646|gb|ADI77902.1| truncated internalin A [Listeria monocytogenes]
gi|298360650|gb|ADI77904.1| truncated internalin A [Listeria monocytogenes]
gi|298360664|gb|ADI77911.1| truncated internalin A [Listeria monocytogenes]
gi|298360686|gb|ADI77922.1| truncated internalin A [Listeria monocytogenes]
gi|298360702|gb|ADI77930.1| truncated internalin A [Listeria monocytogenes]
gi|298360718|gb|ADI77938.1| truncated internalin A [Listeria monocytogenes]
gi|443428870|gb|AGC92234.1| truncated internalin A [Listeria monocytogenes]
Length = 605
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQL--SFGNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|112959440|gb|ABI27247.1| truncated internalin A [Listeria monocytogenes]
gi|112959442|gb|ABI27248.1| truncated internalin A [Listeria monocytogenes]
gi|112959448|gb|ABI27251.1| truncated internalin A [Listeria monocytogenes]
gi|112959454|gb|ABI27254.1| truncated internalin A [Listeria monocytogenes]
gi|112959458|gb|ABI27256.1| truncated internalin A [Listeria monocytogenes]
gi|112959460|gb|ABI27257.1| truncated internalin A [Listeria monocytogenes]
gi|112959462|gb|ABI27258.1| truncated internalin A [Listeria monocytogenes]
gi|112959472|gb|ABI27263.1| truncated internalin A [Listeria monocytogenes]
gi|112959480|gb|ABI27267.1| truncated internalin A [Listeria monocytogenes]
gi|112959482|gb|ABI27268.1| truncated internalin A [Listeria monocytogenes]
gi|112959488|gb|ABI27271.1| truncated internalin A [Listeria monocytogenes]
gi|112959514|gb|ABI27284.1| truncated internalin A [Listeria monocytogenes]
gi|112959538|gb|ABI27296.1| truncated internalin A [Listeria monocytogenes]
gi|112959542|gb|ABI27298.1| truncated internalin A [Listeria monocytogenes]
gi|112959548|gb|ABI27301.1| truncated internalin A [Listeria monocytogenes]
Length = 542
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 35 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 88
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 89 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQL--SFGNQVTD--LKPL 140
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 141 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 193
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 194 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 247
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 248 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 305
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 306 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 363
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 364 NVSIPNTVKNVTGALIAPATISDGG 388
>gi|322952096|gb|ADX21047.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|22347566|gb|AAM95928.1| internalin A precursor [Listeria monocytogenes]
Length = 746
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 42 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 95
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 96 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 147
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 148 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 200
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 201 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 254
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 255 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 312
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 313 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKT 370
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 371 NVSIPNTVKNVTGALIAPATISDGG 395
>gi|28210241|ref|NP_781185.1| internalin A-like protein/ S-layer protein [Clostridium tetani E88]
gi|28202677|gb|AAO35122.1| internalin A-like protein/putative S-layer protein [Clostridium
tetani E88]
Length = 695
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 166/337 (49%), Gaps = 46/337 (13%)
Query: 72 SGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLI 131
S L LK NL++L + + LE LRGL+NL +L N + LI
Sbjct: 372 SNLEPLKSMDNLENL---YLTKTKVVSLEPLRGLTNLKALVI---NETNVSDLTPIKNLI 425
Query: 132 NLVKLDLERCTRIHGGLVNLKG---LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
N LER T LV+L G L+ LESL+I N S++ + LTNLKSL I+
Sbjct: 426 N-----LERLTLGDNKLVSLAGIENLVNLESLDINKNNV---SNLASIRDLTNLKSLNIN 477
Query: 189 CSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEK 247
+ VTD S + LK L++++ LN G L +L+AL L ++ L+
Sbjct: 478 ENNVTDLSVVTNLKNLERIS-LNKNGV----TSLGALAALPELEWVTAKENGLT------ 526
Query: 248 FSKIG-----SLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNL 302
S +G LK L L N+I+D L L LT+LE+L+L + I D + +L+ L +
Sbjct: 527 -STVGLQNALKLKELFLDSNQISD--LSSLANLTSLETLSLRTNNISD--VSSLSDLTRM 581
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
K L L +GS + L+ + NL + + ISD S +A + +LK+L++ +++
Sbjct: 582 KNLYLHKNNIGS--IAPLASMENLTRLYVGKNNISDIS--AVANMKNLKTLSIGENMVSN 637
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAY-LRNFKNL 398
G ++ L L LD+ ITD+ A L N K++
Sbjct: 638 IG--PVSGLQSLETLDVADNFITDASPAIGLPNLKDI 672
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 175/352 (49%), Gaps = 52/352 (14%)
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
AG+ NL+ DL + NL+ L +++L + ++PL GLTNLK+L
Sbjct: 352 LAGIENLI--DLRVLNAGKNNISNLEPLKSMDNLENLYLTKTKVVSLEPLRGLTNLKALV 409
Query: 187 ISCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGC 245
I+ + V+D + I L L++LTL + V+ A +++L L S L++N+ +S+
Sbjct: 410 INETNVSDLTPIKNLINLERLTL--GDNKLVSLAGIENLVNLES---LDINKNNVSN--L 462
Query: 246 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI----------------- 288
+ +LK LN+ N +TD +V L NLE ++L+ G+
Sbjct: 463 ASIRDLTNLKSLNINENNVTDLSVVT--NLKNLERISLNKNGVTSLGALAALPELEWVTA 520
Query: 289 GDEGLVNLTGLCN---LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
+ GL + GL N LK L L Q+ S L L+ LT+LE+++L ISD S L+
Sbjct: 521 KENGLTSTVGLQNALKLKELFLDSNQI--SDLSSLANLTSLETLSLRTNNISDVS--SLS 576
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
L+ +K+L L I +A L S+ LT L + I+D A + N KNL++L I
Sbjct: 577 DLTRMKNLYLHKNNI--GSIAPLASMENLTRLYVGKNNISDISA--VANMKNLKTLSIGE 632
Query: 406 GGLTD----AGLTGLVSLNVSNSRITSAGLRHLKP---LKNLRSLTLESCKV 450
+++ +GL L +L+V+++ IT A P L NL+ + L + KV
Sbjct: 633 NMVSNIGPVSGLQSLETLDVADNFITDAS-----PAIGLPNLKDIMLLNTKV 679
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 184/432 (42%), Gaps = 103/432 (23%)
Query: 57 SSLLSVDLSGSDVTD----SGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLS 112
+L S+DLS +++ D SGL +LK+ + ++ +I+D ++ L GL NL L+
Sbjct: 103 ENLQSLDLSNNEIKDLGSLSGLKYLKELTLYKN-------KITD--VKALDGLKNLEKLN 153
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCT-------------RI----HGGLVNLKGLM 155
R N +G+K GL L +LDL + + RI G+ N + L
Sbjct: 154 LRDNKVKNIEGLK---GLEKLRELDLGKNSVFQPKPLKDLKNLRILNLESNGIGNAEDLE 210
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 215
+L+ + + T D++PL LTN+ L + + VT I LK + L LN+
Sbjct: 211 ELKQVEHLILSNNTVDDVEPLLTLTNVNKLYLDDNPVT--HIGKLKDMTNLKRLNINNDS 268
Query: 216 VTA-ACLDSLSALGSLFYLN----LNRCQLSD---------------------DGCEK-- 247
+ A L L L + N L+ +L+D D EK
Sbjct: 269 IEDLAELKKFKNLQWLKFKNQEMVLDNKKLNDLLVDPNKEVKFADKNLEFAIRDKIEKPK 328
Query: 248 --------------------------FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
+ L+VLN G N I++ L LK + NLE+L
Sbjct: 329 GAIKKADLQRVTQLDLWDKNVTNLAGIENLIDLRVLNAGKNNISN--LEPLKSMDNLENL 386
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 341
L + L L GL NLK L +++T V S L + L NLE + L D L
Sbjct: 387 YLTKTKVV--SLEPLRGLTNLKALVINETNV--SDLTPIKNLINLERLTL-----GDNKL 437
Query: 342 RKLAGLSSLKSL-NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRS 400
LAG+ +L +L +LD + + LA++ LT L L++ +TD + + N KNL
Sbjct: 438 VSLAGIENLVNLESLDINKNNVSNLASIRDLTNLKSLNINENNVTD--LSVVTNLKNLER 495
Query: 401 LEICGGGLTDAG 412
+ + G+T G
Sbjct: 496 ISLNKNGVTSLG 507
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 142/324 (43%), Gaps = 45/324 (13%)
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG-IAYLKGLQKLTLLNLEGCPVTA 218
LN+K N D+ L NL+SL +S +++ D G ++ LK L++LTL + V A
Sbjct: 86 LNLKSKNI---KDISGLEFFENLQSLDLSNNEIKDLGSLSGLKYLKELTLYKNKITDVKA 142
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
L L +L LNL ++ + E + L+ L+LG N + LK L NL
Sbjct: 143 -----LDGLKNLEKLNLRDNKVKN--IEGLKGLEKLRELDLGKNSVFQPK--PLKDLKNL 193
Query: 279 ESLNLDSCGIGD----------EGLV----------NLTGLCNLKCLELSDTQVGSSGLR 318
LNL+S GIG+ E L+ L L N+ L L D V G
Sbjct: 194 RILNLESNGIGNAEDLEELKQVEHLILSNNTVDDVEPLLTLTNVNKLYLDDNPVTHIG-- 251
Query: 319 HLSGLTNLESINLSFTGISD-GSLRKLAGLSSLKSLN----LDARQITDTGLAALTSLTG 373
L +TNL+ +N++ I D L+K L LK N LD +++ D + +
Sbjct: 252 KLKDMTNLKRLNINNDSIEDLAELKKFKNLQWLKFKNQEMVLDNKKLNDLLVDPNKEVKF 311
Query: 374 LTHLDLFGAR---ITDSGAAYLRNFKNLRSLEICGGGLTD-AGLTGLVSLNVSNS-RITS 428
F R GA + + + L++ +T+ AG+ L+ L V N+ +
Sbjct: 312 ADKNLEFAIRDKIEKPKGAIKKADLQRVTQLDLWDKNVTNLAGIENLIDLRVLNAGKNNI 371
Query: 429 AGLRHLKPLKNLRSLTLESCKVTA 452
+ L LK + NL +L L KV +
Sbjct: 372 SNLEPLKSMDNLENLYLTKTKVVS 395
>gi|85679236|gb|ABC72034.1| InlA [Listeria monocytogenes]
Length = 794
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 97 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 150
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 151 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 202
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 203 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 255
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 256 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 309
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 310 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 367
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 368 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKT 425
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 426 NVSIPNTVKNVTGALIAPATISDGG 450
>gi|219821282|gb|ACL37766.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
+L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SSLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|126143308|gb|ABN80096.1| InlA [Listeria monocytogenes]
Length = 800
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITPLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|226223065|ref|YP_002757172.1| Internalin A [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|386731210|ref|YP_006204706.1| internalin A [Listeria monocytogenes 07PF0776]
gi|406703224|ref|YP_006753578.1| internalin A (LPXTG motif) [Listeria monocytogenes L312]
gi|167861892|gb|ACA05645.1| InlA [Listeria monocytogenes]
gi|167861914|gb|ACA05656.1| InlA [Listeria monocytogenes]
gi|167861978|gb|ACA05688.1| InlA [Listeria monocytogenes]
gi|194239396|emb|CAQ76838.1| internalin A [Listeria monocytogenes]
gi|225875527|emb|CAS04230.1| Internalin A [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|298359780|gb|ADI77469.1| internalin A [Listeria monocytogenes]
gi|384389968|gb|AFH79038.1| internalin A [Listeria monocytogenes 07PF0776]
gi|406360254|emb|CBY66527.1| internalin A (LPXTG motif) [Listeria monocytogenes L312]
Length = 800
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|219821333|gb|ACL37800.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DINPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVKYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|297808737|ref|XP_002872252.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
gi|297318089|gb|EFH48511.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
Length = 642
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 218/430 (50%), Gaps = 51/430 (11%)
Query: 80 CSNLQSLDFNFCIQISDGGLEHL----RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
CSNL + +C++ISD G++ L +GL +L +S+ + IT +++ A L+ L
Sbjct: 171 CSNLNKISLKWCMEISDLGIDLLCKMCKGLKSL-DVSYLK---ITNDSIRSIALLLKLEV 226
Query: 136 LDLERCTRI-HGGLVNLK-GLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQIS--CS 190
LD+ C I GL L+ G L+ +++ C ++ S + + G +++ L+ S S
Sbjct: 227 LDMVSCPLIDDAGLQFLENGSPSLQEVDVTRCERVSLSGLISIVRGHPDIQLLKASHCVS 286
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL-SALGSLFYLNLNRC-QLSDDGCEKF 248
+V+ S + Y+K L+ L + ++G V+ + L +L S+ SL + L+RC ++D G F
Sbjct: 287 EVSGSFLQYIKALKHLKTIWIDGAHVSDSSLVTLSSSCRSLVEIGLSRCVDVTDIGMMGF 346
Query: 249 SK-IGSLKVLNL---GFNEITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLTGLCN- 301
++ +LK LNL GF +TD + + + NLE+L L+SC I ++GL +L
Sbjct: 347 ARNCLNLKTLNLACCGF--VTDVAISAVAQSCRNLETLKLESCHLITEKGLQSLGCYSKL 404
Query: 302 LKCLELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDARQ 359
L+ L+L+D V GL ++S +NL+ + L T ISD + + S K L LD +
Sbjct: 405 LQELDLTDCYGVNDRGLEYISKCSNLQRLKLGLCTNISDKGIFHIGSKCS-KLLELDLYR 463
Query: 360 IT---DTGLAALTS-LTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGL 413
D GLAAL+ L L L + +TD+G +R + L LE+ G +T GL
Sbjct: 464 CAGFGDDGLAALSRGCKSLNRLILSYCCELTDTGVEQIRQLELLSHLELRGLKNITGVGL 523
Query: 414 T---------GLVSLNVSNSRITSAGLRHLKPL-KNLRSLTLESCKVT-------ANDIK 456
G + L + + I +G L KNLR + L +C V+ +++
Sbjct: 524 AAIACGCKKLGYLDLKLCEN-IDDSGFWALAYFSKNLRQINLCNCSVSDTALCMLMSNLS 582
Query: 457 RLQSRDLPNL 466
R+Q DL +L
Sbjct: 583 RVQDVDLVHL 592
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 190/440 (43%), Gaps = 81/440 (18%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
++D +D++ L S+D+S +T+ + + L+ LD C I D GL+ L
Sbjct: 185 ISDLGIDLLCKMCKGLKSLDVSYLKITNDSIRSIALLLKLEVLDMVSCPLIDDAGLQFLE 244
Query: 104 -GLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERC-TRIHGGLVN-LKGLMKLES 159
G +L + R ++ G+ + G ++ L C + + G + +K L L++
Sbjct: 245 NGSPSLQEVDVTRCERVSLSGLISIVRGHPDIQLLKASHCVSEVSGSFLQYIKALKHLKT 304
Query: 160 LNIKWCNCITDSDMKPLS---------GLT------------------NLKSLQISCSK- 191
+ I + ++DS + LS GL+ NLK+L ++C
Sbjct: 305 IWIDGAH-VSDSSLVTLSSSCRSLVEIGLSRCVDVTDIGMMGFARNCLNLKTLNLACCGF 363
Query: 192 VTDSGI-AYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFY-LNLNRCQ-LSDDGCEK 247
VTD I A + + L L LE C +T L SL L L+L C ++D G E
Sbjct: 364 VTDVAISAVAQSCRNLETLKLESCHLITEKGLQSLGCYSKLLQELDLTDCYGVNDRGLEY 423
Query: 248 FSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLTGLCN--- 301
SK +L+ L LG I+D+ + H+ + L L+L C G GD+GL L+ C
Sbjct: 424 ISKCSNLQRLKLGLCTNISDKGIFHIGSKCSKLLELDLYRCAGFGDDGLAALSRGCKSLN 483
Query: 302 ----LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA 357
C EL+DT G +R L L++LE L GL
Sbjct: 484 RLILSYCCELTDT--GVEQIRQLELLSHLE----------------LRGL---------- 515
Query: 358 RQITDTGLAALT-SLTGLTHLDL-FGARITDSGAAYLRNF-KNLRSLEICGGGLTDAGLT 414
+ IT GLAA+ L +LDL I DSG L F KNLR + +C ++D L
Sbjct: 516 KNITGVGLAAIACGCKKLGYLDLKLCENIDDSGFWALAYFSKNLRQINLCNCSVSDTALC 575
Query: 415 GLVSLNVSNSRITSAGLRHL 434
L+S + SR+ L HL
Sbjct: 576 MLMS---NLSRVQDVDLVHL 592
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 175/383 (45%), Gaps = 74/383 (19%)
Query: 82 NLQSLDFNFCIQISDG-----GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-LVK 135
NL SLD + C ++ D L+ + SL+ R+ A+ A+G++ A + + L +
Sbjct: 66 NLSSLDLSVCPKLDDDVVLRLALDGTVSTLGIKSLNLSRSTAVRARGLETLARMCHALER 125
Query: 136 LDLERCT----RIHGGLVNLKGLMKLE-----------------------SLNIKWCNCI 168
+D+ C R L + GL +L+ +++KWC I
Sbjct: 126 VDVSHCWGFGDREAAALSSAVGLRELKMDKCLSLSDVGLARIVVGCSNLNKISLKWCMEI 185
Query: 169 TDSDMKPLSGLTN-LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSL-S 225
+D + L + LKSL +S K+T+ I + L KL +L++ CP + A L L +
Sbjct: 186 SDLGIDLLCKMCKGLKSLDVSYLKITNDSIRSIALLLKLEVLDMVSCPLIDDAGLQFLEN 245
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL-----------NLGFNEITDECLVHLKG 274
SL +++ R CE+ S G + ++ + +E++ L ++K
Sbjct: 246 GSPSLQEVDVTR-------CERVSLSGLISIVRGHPDIQLLKASHCVSEVSGSFLQYIKA 298
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCN-------LKCLELSDTQVGSSGLRHLSGLTNLE 327
L +L+++ +D + D LV L+ C +C++++D +G G NL+
Sbjct: 299 LKHLKTIWIDGAHVSDSSLVTLSSSCRSLVEIGLSRCVDVTD--IGMMGFAR--NCLNLK 354
Query: 328 SINLSFTG-ISDGSLRKLA-GLSSLKSLNLDA-RQITDTGLAALTSLTGLTH----LDLF 380
++NL+ G ++D ++ +A +L++L L++ IT+ GL +L + L D +
Sbjct: 355 TLNLACCGFVTDVAISAVAQSCRNLETLKLESCHLITEKGLQSLGCYSKLLQELDLTDCY 414
Query: 381 GARITDSGAAYLRNFKNLRSLEI 403
G + D G Y+ NL+ L++
Sbjct: 415 G--VNDRGLEYISKCSNLQRLKL 435
>gi|150371726|dbj|BAF65678.1| internalin A [Listeria monocytogenes]
gi|194326151|emb|CAQ77234.1| internalin A [Listeria monocytogenes]
gi|298360180|gb|ADI77669.1| internalin A [Listeria monocytogenes]
gi|298360390|gb|ADI77774.1| internalin A [Listeria monocytogenes]
gi|298360416|gb|ADI77787.1| internalin A [Listeria monocytogenes]
gi|298360620|gb|ADI77889.1| internalin A [Listeria monocytogenes]
gi|298360656|gb|ADI77907.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|298359924|gb|ADI77541.1| internalin A [Listeria monocytogenes]
gi|298359926|gb|ADI77542.1| internalin A [Listeria monocytogenes]
gi|298360172|gb|ADI77665.1| internalin A [Listeria monocytogenes]
gi|298360388|gb|ADI77773.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|294358387|gb|ADE73846.1| InlA [Listeria monocytogenes]
Length = 800
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 182/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL+ L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLISLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T + L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQVGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|219821261|gb|ACL37752.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|371942090|gb|AEX60857.1| internaline [Listeria monocytogenes]
Length = 790
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|351713942|gb|EHB16861.1| F-box/LRR-repeat protein 14 [Heterocephalus glaber]
Length = 399
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 165/314 (52%), Gaps = 31/314 (9%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QL 240
L + C K+TD +G + LLNL C ++ A L LS +GSL LNL C +
Sbjct: 206 QLTLQDCQKLTDLSQHISRGRWRGRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNI 265
Query: 241 SDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL--- 293
SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 SDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRM 324
Query: 294 -VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS 349
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 325 VRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLPC 381
Query: 350 LKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 382 LKVLNLGLWQMTDS 395
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 172/381 (45%), Gaps = 75/381 (19%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 P----VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSL--------KVLNLGF- 261
V L ++ + L L + L D C+K + + ++LNL F
Sbjct: 180 RHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQD--CQKLTDLSQHISRGRWRGRLLNLSFC 237
Query: 262 NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS 321
I+D L+HL + +L SLNL SC +SDT G+ HL+
Sbjct: 238 GGISDAGLLHLSHMGSLRSLNLRSCD------------------NISDT-----GIMHLA 274
Query: 322 -GLTNLESINLSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHL 377
G L +++SF + D SL +A GL LKSL+L + I+D G+ + + GL L
Sbjct: 275 MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTL 334
Query: 378 DLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKP 436
++ RITD G LE+ L+ LTG+ +RIT GL +
Sbjct: 335 NIGQCVRITDKG------------LELIAEHLSQ--LTGIDLYGC--TRITKRGLERITQ 378
Query: 437 LKNLRSLTLESCKVTANDIKR 457
L L+ L L ++T ++ R
Sbjct: 379 LPCLKVLNLGLWQMTDSEKVR 399
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 51/202 (25%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
++D+GL+HL +L+SL+ C ISD G+ HL
Sbjct: 240 ISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL------------------------AM 275
Query: 129 GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++L
Sbjct: 276 GSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLN 335
Query: 187 I-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
I C ++TD G+ + + L +LT ++L GC +++ G
Sbjct: 336 IGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITKRG 372
Query: 245 CEKFSKIGSLKVLNLGFNEITD 266
E+ +++ LKVLNLG ++TD
Sbjct: 373 LERITQLPCLKVLNLGLWQMTD 394
>gi|112961667|gb|ABI28464.1| truncated internalin A [Listeria monocytogenes]
Length = 556
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 49 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 102
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 103 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQL--SFGNQVTD--LKPL 154
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 155 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 207
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 208 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTGLKLGANQISN--I 261
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 262 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 319
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 320 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 377
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 378 NVSIPNTVKNVTGALIAPATISDGG 402
>gi|422808574|ref|ZP_16856985.1| Internalin A [Listeria monocytogenes FSL J1-208]
gi|378752188|gb|EHY62773.1| Internalin A [Listeria monocytogenes FSL J1-208]
Length = 802
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|290975915|ref|XP_002670687.1| predicted protein [Naegleria gruberi]
gi|284084248|gb|EFC37943.1| predicted protein [Naegleria gruberi]
Length = 402
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 7/229 (3%)
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
+SAL L LN++ + ++G + K+ L L++ N+I +++ L L SL +
Sbjct: 148 ISALKQLTLLNISSNNIEEEGAKYIGKLEKLTYLDISKNDIRSNGALYISELKQLTSLVI 207
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
S I +EG +L L NL LE + G+ G +H+S + L ++N++ I D +
Sbjct: 208 SSNNIDEEGAAHLIKLTNLTELETVRNEFGAEGAKHISEMKQLINLNINDNFIGDEGAKY 267
Query: 344 LAGLSSLKSLNLDARQITD-TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
++ + L LN+ + +ITD L LT L + I + Y+ +NL L+
Sbjct: 268 ISEMKQLTILNIGSNEITDRVNFENFGQLNQLTELYIEDNSIQTNACKYISQLQNLNLLD 327
Query: 403 ICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
I G + G + L L + + + + G +H+ +K L L L
Sbjct: 328 ISGNNVDAEGAKYISQMNQLTELEIHTNSLGNEGAKHISTMKELEYLYL 376
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 1/232 (0%)
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
L +L IS + + + G ++ L++LTLLN+ + + L L YL++++ +
Sbjct: 130 LTTLYISRNNIENDGAKHISALKQLTLLNISSNNIEEEGAKYIGKLEKLTYLDISKNDIR 189
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
+G S++ L L + N I +E HL LTNL L G EG +++ +
Sbjct: 190 SNGALYISELKQLTSLVISSNNIDEEGAAHLIKLTNLTELETVRNEFGAEGAKHISEMKQ 249
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG-SLRKLAGLSSLKSLNLDARQI 360
L L ++D +G G +++S + L +N+ I+D + L+ L L ++ I
Sbjct: 250 LINLNINDNFIGDEGAKYISEMKQLTILNIGSNEITDRVNFENFGQLNQLTELYIEDNSI 309
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
++ L L LD+ G + GA Y+ L LEI L + G
Sbjct: 310 QTNACKYISQLQNLNLLDISGNNVDAEGAKYISQMNQLTELEIHTNSLGNEG 361
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 107/245 (43%), Gaps = 1/245 (0%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N I + K +S L L L IS + + + G Y+ L+KLT L++ + + +S
Sbjct: 138 NNIENDGAKHISALKQLTLLNISSNNIEEEGAKYIGKLEKLTYLDISKNDIRSNGALYIS 197
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
L L L ++ + ++G K+ +L L NE E H+ + L +LN++
Sbjct: 198 ELKQLTSLVISSNNIDEEGAAHLIKLTNLTELETVRNEFGAEGAKHISEMKQLINLNIND 257
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSS-GLRHLSGLTNLESINLSFTGISDGSLRKL 344
IGDEG ++ + L L + ++ + L L + + I + + +
Sbjct: 258 NFIGDEGAKYISEMKQLTILNIGSNEITDRVNFENFGQLNQLTELYIEDNSIQTNACKYI 317
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
+ L +L L++ + G ++ + LT L++ + + GA ++ K L L +C
Sbjct: 318 SQLQNLNLLDISGNNVDAEGAKYISQMNQLTELEIHTNSLGNEGAKHISTMKELEYLYLC 377
Query: 405 GGGLT 409
++
Sbjct: 378 DNDVS 382
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 122/278 (43%), Gaps = 30/278 (10%)
Query: 81 SNLQSLDFNFCIQ--ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL 138
N+++L NF I+ + + G+ L S LT+L RNN I G K + L L L++
Sbjct: 102 QNIETLSVNFRIKGVVFNCGVFDLMSKS-LTTLYISRNN-IENDGAKHISALKQLTLLNI 159
Query: 139 ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIA 198
G + L KL L+I N I + +S L L SL IS + + + G A
Sbjct: 160 SSNNIEEEGAKYIGKLEKLTYLDISK-NDIRSNGALYISELKQLTSLVISSNNIDEEGAA 218
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN 258
+L L LT L A +S + L LN+N + D+G + S++ L +LN
Sbjct: 219 HLIKLTNLTELETVRNEFGAEGAKHISEMKQLINLNINDNFIGDEGAKYISEMKQLTILN 278
Query: 259 LGFNEITD--------------ECLV-----------HLKGLTNLESLNLDSCGIGDEGL 293
+G NEITD E + ++ L NL L++ + EG
Sbjct: 279 IGSNEITDRVNFENFGQLNQLTELYIEDNSIQTNACKYISQLQNLNLLDISGNNVDAEGA 338
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
++ + L LE+ +G+ G +H+S + LE + L
Sbjct: 339 KYISQMNQLTELEIHTNSLGNEGAKHISTMKELEYLYL 376
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 4/220 (1%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
L +D+S +D+ +G +++ + L SL + I + G HL L+NLT L RN
Sbjct: 176 EKLTYLDISKNDIRSNGALYISELKQLTSLVIS-SNNIDEEGAAHLIKLTNLTELETVRN 234
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDS-DMKP 175
A+G K + + L+ L++ G + + +L LNI N ITD + +
Sbjct: 235 -EFGAEGAKHISEMKQLINLNINDNFIGDEGAKYISEMKQLTILNI-GSNEITDRVNFEN 292
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L L L I + + + Y+ LQ L LL++ G V A +S + L L +
Sbjct: 293 FGQLNQLTELYIEDNSIQTNACKYISQLQNLNLLDISGNNVDAEGAKYISQMNQLTELEI 352
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
+ L ++G + S + L+ L L N+++ E H++ +
Sbjct: 353 HTNSLGNEGAKHISTMKELEYLYLCDNDVSVEVKQHIREI 392
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L ++ +S I + + ++ L L LN+ + I + G + L LT+LD+ I
Sbjct: 130 LTTLYISRNNIENDGAKHISALKQLTLLNISSNNIEEEGAKYIGKLEKLTYLDISKNDIR 189
Query: 386 DSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKN 439
+GA Y+ K L SL I + + G LT L L + + G +H+ +K
Sbjct: 190 SNGALYISELKQLTSLVISSNNIDEEGAAHLIKLTNLTELETVRNEFGAEGAKHISEMKQ 249
Query: 440 LRSLTL 445
L +L +
Sbjct: 250 LINLNI 255
>gi|219821360|gb|ACL37818.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|85679230|gb|ABC72031.1| InlA [Listeria monocytogenes]
Length = 794
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 97 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 150
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 151 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 202
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 203 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 255
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 256 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 309
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 310 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 367
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 368 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKV 425
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 426 NVSIPNTVKNVTGALIAPATISDGG 450
>gi|313485048|gb|ADR52999.1| InlA [Listeria monocytogenes]
gi|313485083|gb|ADR53012.1| InlA [Listeria monocytogenes]
Length = 800
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|130774759|gb|ABO32394.1| InlA [Listeria monocytogenes]
gi|298360132|gb|ADI77645.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|322952085|gb|ADX21042.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|254825753|ref|ZP_05230754.1| internalin A [Listeria monocytogenes FSL J1-194]
gi|255521302|ref|ZP_05388539.1| internalin A [Listeria monocytogenes FSL J1-175]
gi|130774771|gb|ABO32400.1| InlA [Listeria monocytogenes]
gi|130774777|gb|ABO32403.1| InlA [Listeria monocytogenes]
gi|130774779|gb|ABO32404.1| InlA [Listeria monocytogenes]
gi|150371874|dbj|BAF65726.1| internalin A [Listeria monocytogenes]
gi|150371876|dbj|BAF65727.1| internalin A [Listeria monocytogenes]
gi|223006790|gb|ACM69352.1| internalin A [Listeria monocytogenes]
gi|290350838|dbj|BAI78340.1| internalin A [Listeria monocytogenes]
gi|293594997|gb|EFG02758.1| internalin A [Listeria monocytogenes FSL J1-194]
gi|298359742|gb|ADI77450.1| internalin A [Listeria monocytogenes]
gi|298359744|gb|ADI77451.1| internalin A [Listeria monocytogenes]
gi|298359756|gb|ADI77457.1| internalin A [Listeria monocytogenes]
gi|298359790|gb|ADI77474.1| internalin A [Listeria monocytogenes]
gi|298359872|gb|ADI77515.1| internalin A [Listeria monocytogenes]
gi|298359880|gb|ADI77519.1| internalin A [Listeria monocytogenes]
gi|298359942|gb|ADI77550.1| internalin A [Listeria monocytogenes]
gi|298359946|gb|ADI77552.1| internalin A [Listeria monocytogenes]
gi|298360032|gb|ADI77595.1| internalin A [Listeria monocytogenes]
gi|298360064|gb|ADI77611.1| internalin A [Listeria monocytogenes]
gi|298360114|gb|ADI77636.1| internalin A [Listeria monocytogenes]
gi|298360202|gb|ADI77680.1| internalin A [Listeria monocytogenes]
gi|298360282|gb|ADI77720.1| internalin A [Listeria monocytogenes]
gi|298360284|gb|ADI77721.1| internalin A [Listeria monocytogenes]
gi|298360314|gb|ADI77736.1| internalin A [Listeria monocytogenes]
gi|298360330|gb|ADI77744.1| internalin A [Listeria monocytogenes]
gi|298360346|gb|ADI77752.1| internalin A [Listeria monocytogenes]
gi|298360410|gb|ADI77784.1| internalin A [Listeria monocytogenes]
gi|298360420|gb|ADI77789.1| internalin A [Listeria monocytogenes]
gi|298360440|gb|ADI77799.1| internalin A [Listeria monocytogenes]
gi|298360454|gb|ADI77806.1| internalin A [Listeria monocytogenes]
gi|298360470|gb|ADI77814.1| internalin A [Listeria monocytogenes]
gi|298360494|gb|ADI77826.1| internalin A [Listeria monocytogenes]
gi|298360506|gb|ADI77832.1| internalin A [Listeria monocytogenes]
gi|298360604|gb|ADI77881.1| internalin A [Listeria monocytogenes]
gi|298360610|gb|ADI77884.1| internalin A [Listeria monocytogenes]
gi|298360612|gb|ADI77885.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|430746592|ref|YP_007205721.1| WD40 repeat-containing protein [Singulisphaera acidiphila DSM
18658]
gi|430018312|gb|AGA30026.1| WD40 repeat-containing protein [Singulisphaera acidiphila DSM
18658]
Length = 830
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 101/187 (54%), Gaps = 15/187 (8%)
Query: 279 ESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDT-QVGSSGLRHLSGLTNLESINLSFTGI 336
+ L +DS GI D GL +L L NL+ L + T ++ GL HL+ L L +NLS +G+
Sbjct: 623 KDLRIDSEEGIDDAGLEHLARLVNLEGLSIHQTARIRGPGLAHLAKLPKLTKLNLS-SGL 681
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
SD ++ +LA L LK L+LD + D+G+AAL +T LT L L ++TD+G + L+
Sbjct: 682 SDKAVARLAPLKELKRLSLDHTDLRDSGMAALKGMTTLTELSLDETKVTDAGLSALKGMV 741
Query: 397 NLRSL-----EICGGGLTD-AGLTGLVSLN------VSNSRITSAGLRHLKPLKNLRSLT 444
+ L + G GL + G++ L SL+ S +T AGL HL+ L L L
Sbjct: 742 QMERLSLGNVSVRGPGLANLKGMSRLKSLSFVAVAQYKPSPLTDAGLVHLENLPALDFLN 801
Query: 445 LESCKVT 451
L VT
Sbjct: 802 LGETSVT 808
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 105/242 (43%), Gaps = 44/242 (18%)
Query: 158 ESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGCPV 216
+ L I I D+ ++ L+ L NL+ L I +++ G+A+L L KLT LNL
Sbjct: 623 KDLRIDSEEGIDDAGLEHLARLVNLEGLSIHQTARIRGPGLAHLAKLPKLTKLNLS---- 678
Query: 217 TAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT 276
LSD + + + LK L+L ++ D + LKG+T
Sbjct: 679 ---------------------SGLSDKAVARLAPLKELKRLSLDHTDLRDSGMAALKGMT 717
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
L L+LD + D GL L G+ ++ L L + V GL +L G++ L+S LSF +
Sbjct: 718 TLTELSLDETKVTDAGLSALKGMVQMERLSLGNVSVRGPGLANLKGMSRLKS--LSFVAV 775
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
+ +TD GL L +L L L+L +TD+G A R K
Sbjct: 776 A----------------QYKPSPLTDAGLVHLENLPALDFLNLGETSVTDAGMAAARKIK 819
Query: 397 NL 398
L
Sbjct: 820 PL 821
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 9/186 (4%)
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMK 174
I G++ A L+NL L + + RI G GL +L L KL LN+ + ++D +
Sbjct: 630 EEGIDDAGLEHLARLVNLEGLSIHQTARIRGPGLAHLAKLPKLTKLNL--SSGLSDKAVA 687
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L+ L LK L + + + DSG+A LKG+ LT L+L+ VT A L +L + + L+
Sbjct: 688 RLAPLKELKRLSLDHTDLRDSGMAALKGMTTLTELSLDETKVTDAGLSALKGMVQMERLS 747
Query: 235 LNRCQLSDDGCEKFSKIGSLK------VLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
L + G + LK V + +TD LVHL+ L L+ LNL +
Sbjct: 748 LGNVSVRGPGLANLKGMSRLKSLSFVAVAQYKPSPLTDAGLVHLENLPALDFLNLGETSV 807
Query: 289 GDEGLV 294
D G+
Sbjct: 808 TDAGMA 813
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 9/192 (4%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+ D+GL HL NL+ L + +I GL HL L LT L+ ++ ++ + + A
Sbjct: 633 IDDAGLEHLARLVNLEGLSIHQTARIRGPGLAHLAKLPKLTKLNL--SSGLSDKAVARLA 690
Query: 129 GLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
L L +L L+ G+ LKG+ L L++ +TD+ + L G+ ++ L +
Sbjct: 691 PLKELKRLSLDHTDLRDSGMAALKGMTTLTELSLDETK-VTDAGLSALKGMVQMERLSLG 749
Query: 189 CSKVTDSGIAYLKGLQKLTLLNL------EGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
V G+A LKG+ +L L+ + P+T A L L L +L +LNL ++D
Sbjct: 750 NVSVRGPGLANLKGMSRLKSLSFVAVAQYKPSPLTDAGLVHLENLPALDFLNLGETSVTD 809
Query: 243 DGCEKFSKIGSL 254
G KI L
Sbjct: 810 AGMAAARKIKPL 821
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 23/205 (11%)
Query: 240 LSDDGCEKFSKIGSLKVLNLGFN-EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
+ D G E +++ +L+ L++ I L HL L L LNL S G+ D+ + L
Sbjct: 633 IDDAGLEHLARLVNLEGLSIHQTARIRGPGLAHLAKLPKLTKLNL-SSGLSDKAVARLAP 691
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L LK L L T + SG+ L G+T L ++L T ++D L L G+ ++ L+L
Sbjct: 692 LKELKRLSLDHTDLRDSGMAALKGMTTLTELSLDETKVTDAGLSALKGMVQMERLSLGNV 751
Query: 359 QITDTGLAALTSLTGLTHLDLFG------ARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
+ GLA L ++ L L + +TD+G +L N L L + +TDAG
Sbjct: 752 SVRGPGLANLKGMSRLKSLSFVAVAQYKPSPLTDAGLVHLENLPALDFLNLGETSVTDAG 811
Query: 413 LTGLVSLNVSNSRITSAGLRHLKPL 437
+ A R +KPL
Sbjct: 812 M---------------AAARKIKPL 821
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
S ++D + L L+ L + + D G+ L+G++ LT LS +T G+ A
Sbjct: 679 SGLSDKAVARLAPLKELKRLSLDHT-DLRDSGMAALKGMTTLTELSLDETK-VTDAGLSA 736
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC-----NCITDSDMKPLSGLTN 181
G++ + +L L + GL NLKG+ +L+SL+ + +TD+ + L L
Sbjct: 737 LKGMVQMERLSLGNVSVRGPGLANLKGMSRLKSLSFVAVAQYKPSPLTDAGLVHLENLPA 796
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTL 208
L L + + VTD+G+A + ++ L L
Sbjct: 797 LDFLNLGETSVTDAGMAAARKIKPLIL 823
>gi|322952088|gb|ADX21043.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|322790910|gb|EFZ15576.1| hypothetical protein SINV_11426 [Solenopsis invicta]
Length = 526
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 155/314 (49%), Gaps = 68/314 (21%)
Query: 59 LLSVDLSG-SDVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFR 114
L +++LSG ++TD G+ + ++ +L L+ + C Q++D L + + L NL L
Sbjct: 235 LEALNLSGCYNITDIGITNAFCQEYPSLTELNLSLCKQVTDTSLSRIAQYLKNLEHLELG 294
Query: 115 RNNAITAQGMKAFA-GLINLVKLDLERCTRIHG-GLVNLKGL--------MKLESLNIKW 164
IT G+ A GL L +LDL C + G+ +L GL + LE L+++
Sbjct: 295 GCCNITNTGLLLIAWGLKKLKRLDLRSCWHVSDIGIAHLAGLNRETADGNLALEHLSLQD 354
Query: 165 CNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
C ++D ++ +S G T LKS+ +S C +TDSG+ +L + L LNL C D
Sbjct: 355 CQRLSDEALRHVSLGFTTLKSINLSFCVCITDSGVKHLARMSSLRELNLRSC-------D 407
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLES 280
++S +G + L++ G S+I SL V F ++I D+ LVH+ +GL NL+S
Sbjct: 408 NISDIGMAY--------LAEGG----SRITSLDV---SFCDKIGDQALVHISQGLFNLKS 452
Query: 281 LNLDSCGIGDEGLVNLT-----------GLC----------------NLKCLELSD-TQV 312
L+L +C I DEG+ + G C NLKC++L T++
Sbjct: 453 LSLSACQISDEGICKIAKTLHDLETLNIGQCSRLTDRGLHTVAESMKNLKCIDLYGCTKI 512
Query: 313 GSSGLRHLSGLTNL 326
+SGL + L L
Sbjct: 513 TTSGLERIMKLPQL 526
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 166/342 (48%), Gaps = 54/342 (15%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNL--KGLMKLES 159
RG+ + LS RR + G+ NL L+L C I G+ N + L
Sbjct: 211 RGVKKVQVLSLRRGLS------DVLKGVPNLEALNLSGCYNITDIGITNAFCQEYPSLTE 264
Query: 160 LNIKWCNCITDSDMKPLSG-LTNLKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGCPV 216
LN+ C +TD+ + ++ L NL+ L++ C +T++G+ + GL+KL L+L C
Sbjct: 265 LNLSLCKQVTDTSLSRIAQYLKNLEHLELGGCCNITNTGLLLIAWGLKKLKRLDLRSCWH 324
Query: 217 TA-------ACLDSLSALG--SLFYLNLNRCQ-LSDDGCEKFS-KIGSLKVLNLGFNE-I 264
+ A L+ +A G +L +L+L CQ LSD+ S +LK +NL F I
Sbjct: 325 VSDIGIAHLAGLNRETADGNLALEHLSLQDCQRLSDEALRHVSLGFTTLKSINLSFCVCI 384
Query: 265 TDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL 323
TD + HL +++L LNL SC I D G+ L G
Sbjct: 385 TDSGVKHLARMSSLRELNLRSCDNISDIGMAYLA-----------------------EGG 421
Query: 324 TNLESINLSF-TGISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLF 380
+ + S+++SF I D +L ++ GL +LKSL+L A QI+D G+ + +L L L++
Sbjct: 422 SRITSLDVSFCDKIGDQALVHISQGLFNLKSLSLSACQISDEGICKIAKTLHDLETLNIG 481
Query: 381 G-ARITDSG-AAYLRNFKNLRSLEICG-GGLTDAGLTGLVSL 419
+R+TD G + KNL+ +++ G +T +GL ++ L
Sbjct: 482 QCSRLTDRGLHTVAESMKNLKCIDLYGCTKITTSGLERIMKL 523
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 133/301 (44%), Gaps = 79/301 (26%)
Query: 176 LSGLTNLKSLQIS-CSKVTDSGI--AYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLF 231
L G+ NL++L +S C +TD GI A+ + LT LNL C VT L ++ +
Sbjct: 229 LKGVPNLEALNLSGCYNITDIGITNAFCQEYPSLTELNLSLCKQVTDTSLSRIAQ----Y 284
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG-IGD 290
NL +L GC + G L + GL L+ L+L SC + D
Sbjct: 285 LKNLEHLELG--GCCNITNTGLLLIA---------------WGLKKLKRLDLRSCWHVSD 327
Query: 291 EGLVNLTGL--------CNLKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSF-TGISDG 339
G+ +L GL L+ L L D Q + LRH+S G T L+SINLSF I+D
Sbjct: 328 IGIAHLAGLNRETADGNLALEHLSLQDCQRLSDEALRHVSLGFTTLKSINLSFCVCITDS 387
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
++ LA +SSL+ LNL + I+D G AYL
Sbjct: 388 GVKHLARMSSLRELNLRSCD-----------------------NISDIGMAYLAE----- 419
Query: 400 SLEICGGGLTDAGLTGLVSLNVSN-SRITSAGLRHL-KPLKNLRSLTLESCKVTANDIKR 457
G + + SL+VS +I L H+ + L NL+SL+L +C+++ I +
Sbjct: 420 ------------GGSRITSLDVSFCDKIGDQALVHISQGLFNLKSLSLSACQISDEGICK 467
Query: 458 L 458
+
Sbjct: 468 I 468
>gi|219821330|gb|ACL37798.1| internalin A [Listeria monocytogenes]
gi|219821348|gb|ACL37810.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAAHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|130774755|gb|ABO32392.1| InlA [Listeria monocytogenes]
gi|130774767|gb|ABO32398.1| InlA [Listeria monocytogenes]
gi|298359732|gb|ADI77445.1| internalin A [Listeria monocytogenes]
gi|298360004|gb|ADI77581.1| internalin A [Listeria monocytogenes]
gi|298360478|gb|ADI77818.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|219821351|gb|ACL37812.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVKYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|322952090|gb|ADX21044.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|313485079|gb|ADR53010.1| InlA [Listeria monocytogenes]
Length = 800
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|298359892|gb|ADI77525.1| internalin A [Listeria monocytogenes]
gi|298360422|gb|ADI77790.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|313485052|gb|ADR53000.1| InlA [Listeria monocytogenes]
Length = 771
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|313485077|gb|ADR53009.1| InlA [Listeria monocytogenes]
Length = 800
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|130774769|gb|ABO32399.1| InlA [Listeria monocytogenes]
gi|130774773|gb|ABO32401.1| InlA [Listeria monocytogenes]
gi|167861932|gb|ACA05665.1| InlA [Listeria monocytogenes]
gi|167861992|gb|ACA05695.1| InlA [Listeria monocytogenes]
gi|167861994|gb|ACA05696.1| InlA [Listeria monocytogenes]
gi|167861998|gb|ACA05698.1| InlA [Listeria monocytogenes]
gi|167862004|gb|ACA05701.1| InlA [Listeria monocytogenes]
gi|167862034|gb|ACA05716.1| InlA [Listeria monocytogenes]
gi|194326169|emb|CAQ77243.1| internalin A [Listeria monocytogenes]
gi|298359894|gb|ADI77526.1| internalin A [Listeria monocytogenes]
gi|298360034|gb|ADI77596.1| internalin A [Listeria monocytogenes]
gi|298360110|gb|ADI77634.1| internalin A [Listeria monocytogenes]
gi|298360112|gb|ADI77635.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|254854324|ref|ZP_05243672.1| internalin A [Listeria monocytogenes FSL R2-503]
gi|300766414|ref|ZP_07076370.1| internalin A precursor [Listeria monocytogenes FSL N1-017]
gi|404279991|ref|YP_006680889.1| internalin A [Listeria monocytogenes SLCC2755]
gi|404285805|ref|YP_006692391.1| internalin A [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|405754532|ref|YP_006677996.1| internalin A [Listeria monocytogenes SLCC2540]
gi|130774761|gb|ABO32395.1| InlA [Listeria monocytogenes]
gi|130774765|gb|ABO32397.1| InlA [Listeria monocytogenes]
gi|130774775|gb|ABO32402.1| InlA [Listeria monocytogenes]
gi|150371872|dbj|BAF65725.1| internalin A [Listeria monocytogenes]
gi|150371878|dbj|BAF65728.1| internalin A [Listeria monocytogenes]
gi|150371880|dbj|BAF65729.1| internalin A [Listeria monocytogenes]
gi|150371882|dbj|BAF65730.1| internalin A [Listeria monocytogenes]
gi|150371884|dbj|BAF65731.1| internalin A [Listeria monocytogenes]
gi|150371886|dbj|BAF65732.1| internalin A [Listeria monocytogenes]
gi|167861936|gb|ACA05667.1| InlA [Listeria monocytogenes]
gi|167861950|gb|ACA05674.1| InlA [Listeria monocytogenes]
gi|167861974|gb|ACA05686.1| InlA [Listeria monocytogenes]
gi|167861990|gb|ACA05694.1| InlA [Listeria monocytogenes]
gi|194239386|emb|CAQ76833.1| internalin A [Listeria monocytogenes]
gi|194239390|emb|CAQ76835.1| internalin A [Listeria monocytogenes]
gi|194239398|emb|CAQ76839.1| internalin A [Listeria monocytogenes]
gi|194326159|emb|CAQ77238.1| internalin A [Listeria monocytogenes]
gi|223006782|gb|ACM69348.1| internalin A [Listeria monocytogenes]
gi|258607720|gb|EEW20328.1| internalin A [Listeria monocytogenes FSL R2-503]
gi|290350822|dbj|BAI78332.1| internalin A [Listeria monocytogenes]
gi|290350824|dbj|BAI78333.1| internalin A [Listeria monocytogenes]
gi|298359734|gb|ADI77446.1| internalin A [Listeria monocytogenes]
gi|298359740|gb|ADI77449.1| internalin A [Listeria monocytogenes]
gi|298359774|gb|ADI77466.1| internalin A [Listeria monocytogenes]
gi|298359822|gb|ADI77490.1| internalin A [Listeria monocytogenes]
gi|298359826|gb|ADI77492.1| internalin A [Listeria monocytogenes]
gi|298359830|gb|ADI77494.1| internalin A [Listeria monocytogenes]
gi|298359834|gb|ADI77496.1| internalin A [Listeria monocytogenes]
gi|298359836|gb|ADI77497.1| internalin A [Listeria monocytogenes]
gi|298359846|gb|ADI77502.1| internalin A [Listeria monocytogenes]
gi|298359848|gb|ADI77503.1| internalin A [Listeria monocytogenes]
gi|298359854|gb|ADI77506.1| internalin A [Listeria monocytogenes]
gi|298359856|gb|ADI77507.1| internalin A [Listeria monocytogenes]
gi|298359868|gb|ADI77513.1| internalin A [Listeria monocytogenes]
gi|298359870|gb|ADI77514.1| internalin A [Listeria monocytogenes]
gi|298359888|gb|ADI77523.1| internalin A [Listeria monocytogenes]
gi|298359920|gb|ADI77539.1| internalin A [Listeria monocytogenes]
gi|298359954|gb|ADI77556.1| internalin A [Listeria monocytogenes]
gi|298359968|gb|ADI77563.1| internalin A [Listeria monocytogenes]
gi|298359972|gb|ADI77565.1| internalin A [Listeria monocytogenes]
gi|298359984|gb|ADI77571.1| internalin A [Listeria monocytogenes]
gi|298359998|gb|ADI77578.1| internalin A [Listeria monocytogenes]
gi|298360002|gb|ADI77580.1| internalin A [Listeria monocytogenes]
gi|298360006|gb|ADI77582.1| internalin A [Listeria monocytogenes]
gi|298360040|gb|ADI77599.1| internalin A [Listeria monocytogenes]
gi|298360042|gb|ADI77600.1| internalin A [Listeria monocytogenes]
gi|298360044|gb|ADI77601.1| internalin A [Listeria monocytogenes]
gi|298360050|gb|ADI77604.1| internalin A [Listeria monocytogenes]
gi|298360080|gb|ADI77619.1| internalin A [Listeria monocytogenes]
gi|298360090|gb|ADI77624.1| internalin A [Listeria monocytogenes]
gi|298360100|gb|ADI77629.1| internalin A [Listeria monocytogenes]
gi|298360126|gb|ADI77642.1| internalin A [Listeria monocytogenes]
gi|298360150|gb|ADI77654.1| internalin A [Listeria monocytogenes]
gi|298360156|gb|ADI77657.1| internalin A [Listeria monocytogenes]
gi|298360166|gb|ADI77662.1| internalin A [Listeria monocytogenes]
gi|298360188|gb|ADI77673.1| internalin A [Listeria monocytogenes]
gi|298360190|gb|ADI77674.1| internalin A [Listeria monocytogenes]
gi|298360194|gb|ADI77676.1| internalin A [Listeria monocytogenes]
gi|298360220|gb|ADI77689.1| internalin A [Listeria monocytogenes]
gi|298360222|gb|ADI77690.1| internalin A [Listeria monocytogenes]
gi|298360238|gb|ADI77698.1| internalin A [Listeria monocytogenes]
gi|298360246|gb|ADI77702.1| internalin A [Listeria monocytogenes]
gi|298360260|gb|ADI77709.1| internalin A [Listeria monocytogenes]
gi|298360264|gb|ADI77711.1| internalin A [Listeria monocytogenes]
gi|298360266|gb|ADI77712.1| internalin A [Listeria monocytogenes]
gi|298360294|gb|ADI77726.1| internalin A [Listeria monocytogenes]
gi|298360298|gb|ADI77728.1| internalin A [Listeria monocytogenes]
gi|298360312|gb|ADI77735.1| internalin A [Listeria monocytogenes]
gi|298360318|gb|ADI77738.1| internalin A [Listeria monocytogenes]
gi|298360356|gb|ADI77757.1| internalin A [Listeria monocytogenes]
gi|298360368|gb|ADI77763.1| internalin A [Listeria monocytogenes]
gi|298360396|gb|ADI77777.1| internalin A [Listeria monocytogenes]
gi|298360398|gb|ADI77778.1| internalin A [Listeria monocytogenes]
gi|298360400|gb|ADI77779.1| internalin A [Listeria monocytogenes]
gi|298360428|gb|ADI77793.1| internalin A [Listeria monocytogenes]
gi|298360434|gb|ADI77796.1| internalin A [Listeria monocytogenes]
gi|298360448|gb|ADI77803.1| internalin A [Listeria monocytogenes]
gi|298360462|gb|ADI77810.1| internalin A [Listeria monocytogenes]
gi|298360498|gb|ADI77828.1| internalin A [Listeria monocytogenes]
gi|298360502|gb|ADI77830.1| internalin A [Listeria monocytogenes]
gi|298360510|gb|ADI77834.1| internalin A [Listeria monocytogenes]
gi|298360514|gb|ADI77836.1| internalin A [Listeria monocytogenes]
gi|298360558|gb|ADI77858.1| internalin A [Listeria monocytogenes]
gi|298360560|gb|ADI77859.1| internalin A [Listeria monocytogenes]
gi|298360566|gb|ADI77862.1| internalin A [Listeria monocytogenes]
gi|298360586|gb|ADI77872.1| internalin A [Listeria monocytogenes]
gi|298360614|gb|ADI77886.1| internalin A [Listeria monocytogenes]
gi|298360630|gb|ADI77894.1| internalin A [Listeria monocytogenes]
gi|298360638|gb|ADI77898.1| internalin A [Listeria monocytogenes]
gi|298360652|gb|ADI77905.1| internalin A [Listeria monocytogenes]
gi|298360680|gb|ADI77919.1| internalin A [Listeria monocytogenes]
gi|298360682|gb|ADI77920.1| internalin A [Listeria monocytogenes]
gi|298360694|gb|ADI77926.1| internalin A [Listeria monocytogenes]
gi|298360704|gb|ADI77931.1| internalin A [Listeria monocytogenes]
gi|298360706|gb|ADI77932.1| internalin A [Listeria monocytogenes]
gi|300512880|gb|EFK39971.1| internalin A precursor [Listeria monocytogenes FSL N1-017]
gi|302034315|gb|ADK92311.1| internalin A [Listeria monocytogenes]
gi|302034317|gb|ADK92312.1| internalin A [Listeria monocytogenes]
gi|404223732|emb|CBY75094.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2540]
gi|404226626|emb|CBY48031.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2755]
gi|404244734|emb|CBY02959.1| internalin A (LPXTG motif) [Listeria monocytogenes serotype 7 str.
SLCC2482]
Length = 800
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|219821390|gb|ACL37838.1| internalin A [Listeria monocytogenes]
Length = 744
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKT 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|219821357|gb|ACL37816.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESIIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|443428800|gb|AGC92199.1| truncated internalin A [Listeria monocytogenes]
gi|443428802|gb|AGC92200.1| truncated internalin A [Listeria monocytogenes]
gi|443428806|gb|AGC92202.1| truncated internalin A [Listeria monocytogenes]
gi|443428824|gb|AGC92211.1| truncated internalin A [Listeria monocytogenes]
gi|443428830|gb|AGC92214.1| truncated internalin A [Listeria monocytogenes]
gi|443428832|gb|AGC92215.1| truncated internalin A [Listeria monocytogenes]
gi|443428834|gb|AGC92216.1| truncated internalin A [Listeria monocytogenes]
Length = 797
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|313485054|gb|ADR53001.1| InlA [Listeria monocytogenes]
Length = 771
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|149674|gb|AAA25289.1| internalin [Listeria monocytogenes]
gi|22347564|gb|AAM95927.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 42 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 95
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 96 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 147
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 148 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 200
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 201 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 254
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 255 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 312
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 313 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 370
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 371 NVSIPNTVKNVTGALIAPATISDGG 395
>gi|313485044|gb|ADR52997.1| InlA [Listeria monocytogenes]
Length = 771
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|223698883|gb|ACN19162.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|112959444|gb|ABI27249.1| truncated internalin A [Listeria monocytogenes]
gi|112959490|gb|ABI27272.1| truncated internalin A [Listeria monocytogenes]
Length = 542
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 35 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 88
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 89 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQL--SFGNQVTD--LKPL 140
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 141 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 193
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 194 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTGLKLGANQISN--I 247
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 248 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 305
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 306 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 363
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 364 NVSIPNTVKNVTGALIAPATISDGG 388
>gi|195585785|ref|XP_002082659.1| GD25110 [Drosophila simulans]
gi|194194668|gb|EDX08244.1| GD25110 [Drosophila simulans]
Length = 522
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 147/308 (47%), Gaps = 51/308 (16%)
Query: 35 DLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGS-DVTDSGLIHLK-DCSNLQSLDFNFCI 92
D+ LG + D + IA +L +++L G ++T++GL+ + L+ L+ C
Sbjct: 249 DMNLGHAFSITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCW 308
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN-- 150
ISD G+ HL G S T+ G + L L L+ C R+ +
Sbjct: 309 HISDQGIGHLAGFSRETA-----------------EGNLQLEYLGLQDCQRLSDEALGHI 351
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYL-KGLQKLTL 208
+GL L+S+N+ +C +TDS +K L+ + L+ L + SC ++D G+AYL +G +
Sbjct: 352 AQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINS 411
Query: 209 LNLEGC-PVTAACLDSLS-ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
L++ C ++ L ++ L L L+LN+CQ++D G K +
Sbjct: 412 LDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDHGMLKIA----------------- 454
Query: 267 ECLVHLKGLTNLESLNLDSCG-IGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLSGL 323
K L LE+LN+ C I D+GL L L NLK ++L TQ+ S G+ + L
Sbjct: 455 ------KALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKL 508
Query: 324 TNLESINL 331
L+ +NL
Sbjct: 509 PKLQKLNL 516
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 156/324 (48%), Gaps = 42/324 (12%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
RG+ + LS RR+ G+ A L NL G + +N+
Sbjct: 212 RGIKKVQILSLRRSLKDLVLGVPALTSL-------------------NLSGCFNVADMNL 252
Query: 163 KWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGCPVTA- 218
ITD+ + ++ L NL++L++ C +T++G+ + GL+KL LNL C +
Sbjct: 253 GHAFSITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISD 312
Query: 219 ------ACLDSLSALGSLF--YLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-NEITDE 267
A +A G+L YL L CQ LSD+ ++ + SLK +NL F +TD
Sbjct: 313 QGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDS 372
Query: 268 CLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GL 323
L HL + LE LNL SC I D G+ LT G + L++S ++ L H++ GL
Sbjct: 373 GLKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGL 432
Query: 324 TNLESINLSFTGISDGSLRKLA-GLSSLKSLNL-DARQITDTGLAALTS-LTGLTHLDLF 380
L S++L+ I+D + K+A L L++LN+ +ITD GL L LT L +DL+
Sbjct: 433 YRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLY 492
Query: 381 G-ARITDSGAAYLRNFKNLRSLEI 403
G +++ G + L+ L +
Sbjct: 493 GCTQLSSKGIDIIMKLPKLQKLNL 516
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 113/221 (51%), Gaps = 36/221 (16%)
Query: 257 LNLGFN-EITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLEL-SDTQ 311
+NLG ITD L + + L NLE+L L C I + GL+ + GL LK L L S
Sbjct: 250 MNLGHAFSITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWH 309
Query: 312 VGSSGLRHLSGLTNLES---INLSFTGI------SDGSLRKLA-GLSSLKSLNLD-ARQI 360
+ G+ HL+G + + + L + G+ SD +L +A GL+SLKS+NL +
Sbjct: 310 ISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSV 369
Query: 361 TDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSL 419
TD+GL L + L L+L I+D G AYL T+ G +G+ SL
Sbjct: 370 TDSGLKHLARMPKLEQLNLRSCDNISDIGMAYL----------------TEGG-SGINSL 412
Query: 420 NVSN-SRITSAGLRHL-KPLKNLRSLTLESCKVTANDIKRL 458
+VS +I+ L H+ + L LRSL+L C++T + + ++
Sbjct: 413 DVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDHGMLKI 453
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 320 LSGLTNLESINLSFT-GISDGSLRKLA-GLSSLKSLNLDAR-QITDTGLAALT-SLTGLT 375
LSG N+ +NL I+D SL ++A L +L++L L IT+TGL + L L
Sbjct: 241 LSGCFNVADMNLGHAFSITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLK 300
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRS---LEICGGGLTD-------------AGLTGLVS 418
HL+L I+D G +L F + L++ GL D GLT L S
Sbjct: 301 HLNLRSCWHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKS 360
Query: 419 LNVSN-SRITSAGLRHLKPLKNLRSLTLESC 448
+N+S +T +GL+HL + L L L SC
Sbjct: 361 INLSFCVSVTDSGLKHLARMPKLEQLNLRSC 391
>gi|71912408|gb|AAZ53236.1| InlA [Listeria monocytogenes]
Length = 800
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|313485046|gb|ADR52998.1| InlA [Listeria monocytogenes]
Length = 774
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|219821294|gb|ACL37774.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|298359932|gb|ADI77545.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|47092503|ref|ZP_00230292.1| internalin A [Listeria monocytogenes str. 4b H7858]
gi|417314487|ref|ZP_12101186.1| internalin A [Listeria monocytogenes J1816]
gi|47019095|gb|EAL09839.1| internalin A [Listeria monocytogenes str. 4b H7858]
gi|130774783|gb|ABO32406.1| InlA [Listeria monocytogenes]
gi|130774787|gb|ABO32408.1| InlA [Listeria monocytogenes]
gi|167861878|gb|ACA05638.1| InlA [Listeria monocytogenes]
gi|167861926|gb|ACA05662.1| InlA [Listeria monocytogenes]
gi|194239406|emb|CAQ76843.1| internalin A [Listeria monocytogenes]
gi|223006800|gb|ACM69357.1| internalin A [Listeria monocytogenes]
gi|223006808|gb|ACM69361.1| internalin A [Listeria monocytogenes]
gi|294358399|gb|ADE73852.1| InlA [Listeria monocytogenes]
gi|298359958|gb|ADI77558.1| internalin A [Listeria monocytogenes]
gi|298359988|gb|ADI77573.1| internalin A [Listeria monocytogenes]
gi|298360010|gb|ADI77584.1| internalin A [Listeria monocytogenes]
gi|298360208|gb|ADI77683.1| internalin A [Listeria monocytogenes]
gi|298360370|gb|ADI77764.1| internalin A [Listeria monocytogenes]
gi|298360402|gb|ADI77780.1| internalin A [Listeria monocytogenes]
gi|298360472|gb|ADI77815.1| internalin A [Listeria monocytogenes]
gi|298360544|gb|ADI77851.1| internalin A [Listeria monocytogenes]
gi|298360592|gb|ADI77875.1| internalin A [Listeria monocytogenes]
gi|328467733|gb|EGF38785.1| internalin A [Listeria monocytogenes J1816]
gi|443428820|gb|AGC92209.1| truncated internalin A [Listeria monocytogenes]
gi|443428844|gb|AGC92221.1| truncated internalin A [Listeria monocytogenes]
gi|443428846|gb|AGC92222.1| truncated internalin A [Listeria monocytogenes]
gi|443428850|gb|AGC92224.1| truncated internalin A [Listeria monocytogenes]
gi|443428854|gb|AGC92226.1| truncated internalin A [Listeria monocytogenes]
gi|443428856|gb|AGC92227.1| truncated internalin A [Listeria monocytogenes]
Length = 797
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|298360200|gb|ADI77679.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|313485056|gb|ADR53002.1| InlA [Listeria monocytogenes]
Length = 789
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|219821318|gb|ACL37790.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|150371888|dbj|BAF65733.1| internalin A [Listeria monocytogenes]
gi|150371890|dbj|BAF65734.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|167862012|gb|ACA05705.1| InlA [Listeria monocytogenes]
Length = 797
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|386042770|ref|YP_005961575.1| internalin A [Listeria monocytogenes 10403S]
gi|404409675|ref|YP_006695263.1| internalin A [Listeria monocytogenes SLCC5850]
gi|403399436|sp|G2K3G6.1|INLA_LISM4 RecName: Full=Internalin-A; Flags: Precursor
gi|150371722|dbj|BAF65676.1| internalin A [Listeria monocytogenes]
gi|150371786|dbj|BAF65682.1| internalin A [Listeria monocytogenes]
gi|150371800|dbj|BAF65689.1| internalin A [Listeria monocytogenes]
gi|150371810|dbj|BAF65694.1| internalin A [Listeria monocytogenes]
gi|150371812|dbj|BAF65695.1| internalin A [Listeria monocytogenes]
gi|150371816|dbj|BAF65697.1| internalin A [Listeria monocytogenes]
gi|150371826|dbj|BAF65702.1| internalin A [Listeria monocytogenes]
gi|150371840|dbj|BAF65709.1| internalin A [Listeria monocytogenes]
gi|150371842|dbj|BAF65710.1| internalin A [Listeria monocytogenes]
gi|150371862|dbj|BAF65720.1| internalin A [Listeria monocytogenes]
gi|150371866|dbj|BAF65722.1| internalin A [Listeria monocytogenes]
gi|167861902|gb|ACA05650.1| InlA [Listeria monocytogenes]
gi|167861984|gb|ACA05691.1| InlA [Listeria monocytogenes]
gi|167862000|gb|ACA05699.1| InlA [Listeria monocytogenes]
gi|167862006|gb|ACA05702.1| InlA [Listeria monocytogenes]
gi|194239412|emb|CAQ76846.1| internalin A [Listeria monocytogenes]
gi|223006784|gb|ACM69349.1| internalin A [Listeria monocytogenes]
gi|298359776|gb|ADI77467.1| internalin A [Listeria monocytogenes]
gi|298359804|gb|ADI77481.1| internalin A [Listeria monocytogenes]
gi|298359874|gb|ADI77516.1| internalin A [Listeria monocytogenes]
gi|298360072|gb|ADI77615.1| internalin A [Listeria monocytogenes]
gi|298360106|gb|ADI77632.1| internalin A [Listeria monocytogenes]
gi|298360118|gb|ADI77638.1| internalin A [Listeria monocytogenes]
gi|298360218|gb|ADI77688.1| internalin A [Listeria monocytogenes]
gi|298360262|gb|ADI77710.1| internalin A [Listeria monocytogenes]
gi|298360280|gb|ADI77719.1| internalin A [Listeria monocytogenes]
gi|298360386|gb|ADI77772.1| internalin A [Listeria monocytogenes]
gi|298360468|gb|ADI77813.1| internalin A [Listeria monocytogenes]
gi|298360570|gb|ADI77864.1| internalin A [Listeria monocytogenes]
gi|298360722|gb|ADI77940.1| internalin A [Listeria monocytogenes]
gi|302034307|gb|ADK92307.1| internalin A [Listeria monocytogenes]
gi|302034309|gb|ADK92308.1| internalin A [Listeria monocytogenes]
gi|302034311|gb|ADK92309.1| internalin A [Listeria monocytogenes]
gi|302034313|gb|ADK92310.1| internalin A [Listeria monocytogenes]
gi|302034319|gb|ADK92313.1| internalin A [Listeria monocytogenes]
gi|302034321|gb|ADK92314.1| internalin A [Listeria monocytogenes]
gi|302034323|gb|ADK92315.1| internalin A [Listeria monocytogenes]
gi|302034325|gb|ADK92316.1| internalin A [Listeria monocytogenes]
gi|345536004|gb|AEO05444.1| internalin A [Listeria monocytogenes 10403S]
gi|404229501|emb|CBY50905.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC5850]
gi|443428772|gb|AGC92185.1| internalin A [Listeria monocytogenes]
gi|443428780|gb|AGC92189.1| internalin A [Listeria monocytogenes]
gi|443428864|gb|AGC92231.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|294358389|gb|ADE73847.1| InlA [Listeria monocytogenes]
Length = 800
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|223698871|gb|ACN19154.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|130774791|gb|ABO32410.1| InlA [Listeria monocytogenes]
gi|298360240|gb|ADI77699.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|441470006|emb|CCQ19761.1| Internalin-A [Listeria monocytogenes]
Length = 489
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQL--SFGNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|298359764|gb|ADI77461.1| truncated internalin A [Listeria monocytogenes]
gi|298359862|gb|ADI77510.1| truncated internalin A [Listeria monocytogenes]
gi|298360070|gb|ADI77614.1| truncated internalin A [Listeria monocytogenes]
gi|298360108|gb|ADI77633.1| truncated internalin A [Listeria monocytogenes]
gi|298360174|gb|ADI77666.1| truncated internalin A [Listeria monocytogenes]
gi|298360196|gb|ADI77677.1| truncated internalin A [Listeria monocytogenes]
gi|298360268|gb|ADI77713.1| truncated internalin A [Listeria monocytogenes]
gi|298360290|gb|ADI77724.1| truncated internalin A [Listeria monocytogenes]
gi|298360536|gb|ADI77847.1| truncated internalin A [Listeria monocytogenes]
gi|298360608|gb|ADI77883.1| truncated internalin A [Listeria monocytogenes]
gi|298360658|gb|ADI77908.1| truncated internalin A [Listeria monocytogenes]
gi|298360684|gb|ADI77921.1| truncated internalin A [Listeria monocytogenes]
Length = 605
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQL--SFGNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTGLKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|223698610|gb|ACN18980.1| internalin A [Listeria monocytogenes]
gi|223698616|gb|ACN18984.1| internalin A [Listeria monocytogenes]
gi|223698631|gb|ACN18994.1| internalin A [Listeria monocytogenes]
gi|223698637|gb|ACN18998.1| internalin A [Listeria monocytogenes]
gi|223698640|gb|ACN19000.1| internalin A [Listeria monocytogenes]
gi|223698649|gb|ACN19006.1| internalin A [Listeria monocytogenes]
gi|223698652|gb|ACN19008.1| internalin A [Listeria monocytogenes]
gi|223698661|gb|ACN19014.1| internalin A [Listeria monocytogenes]
gi|223698667|gb|ACN19018.1| internalin A [Listeria monocytogenes]
gi|223698676|gb|ACN19024.1| internalin A [Listeria monocytogenes]
gi|223698679|gb|ACN19026.1| internalin A [Listeria monocytogenes]
gi|223698685|gb|ACN19030.1| internalin A [Listeria monocytogenes]
gi|223698688|gb|ACN19032.1| internalin A [Listeria monocytogenes]
gi|223698709|gb|ACN19046.1| internalin A [Listeria monocytogenes]
gi|223698721|gb|ACN19054.1| internalin A [Listeria monocytogenes]
gi|223698724|gb|ACN19056.1| internalin A [Listeria monocytogenes]
gi|223698727|gb|ACN19058.1| internalin A [Listeria monocytogenes]
gi|223698730|gb|ACN19060.1| internalin A [Listeria monocytogenes]
gi|223698733|gb|ACN19062.1| internalin A [Listeria monocytogenes]
gi|223698742|gb|ACN19068.1| internalin A [Listeria monocytogenes]
gi|223698763|gb|ACN19082.1| internalin A [Listeria monocytogenes]
gi|223698790|gb|ACN19100.1| internalin A [Listeria monocytogenes]
gi|223698808|gb|ACN19112.1| internalin A [Listeria monocytogenes]
gi|223698811|gb|ACN19114.1| internalin A [Listeria monocytogenes]
gi|223698823|gb|ACN19122.1| internalin A [Listeria monocytogenes]
gi|223698853|gb|ACN19142.1| internalin A [Listeria monocytogenes]
gi|223698874|gb|ACN19156.1| internalin A [Listeria monocytogenes]
gi|223698889|gb|ACN19166.1| internalin A [Listeria monocytogenes]
gi|223698949|gb|ACN19206.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|29423714|gb|AAO73555.1| internalin A [Listeria monocytogenes]
Length = 743
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 41 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 94
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 95 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 146
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 147 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 199
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 200 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 253
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 254 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 311
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 312 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 369
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 370 NVSIPNTVKNVTGALIAPATISDGG 394
>gi|130774815|gb|ABO32420.1| InlA [Listeria monocytogenes]
gi|194239404|emb|CAQ76842.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|22347562|gb|AAM95926.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 42 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 95
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 96 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 147
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 148 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 200
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 201 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 254
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 255 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 312
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 313 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 370
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 371 NVSIPNTVKNVTGALIAPATISDGG 395
>gi|219821372|gb|ACL37826.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|84043398|ref|XP_951489.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348218|gb|AAQ15545.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62359994|gb|AAX80418.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei]
Length = 1110
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 204/469 (43%), Gaps = 73/469 (15%)
Query: 65 SGSDVTDSGLIHLKDCSNLQSLDFNFCIQISD-------GGLEHL---------RGLSNL 108
SG V D+ L L DC +L+ L+ ++CIQ++D +E L RG+ +
Sbjct: 303 SGVPVEDNCLKDLCDCGSLERLNISYCIQLTDINPLSNATAIEELNLNGCRRITRGIGVV 362
Query: 109 TSLS-----FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
+L ++ ++ + + +LV+L LE C + G + L L+ LE LN+
Sbjct: 363 WALPKLRVLHMKDVHLSEPSLDSVGTGGSLVRLSLENC-KGFGDVKPLSNLVTLEELNLH 421
Query: 164 WCNCITDSDMKPLSGLTNLKSLQI--------------------------SCSKVTD-SG 196
+C+ +T S M L L L+ L + C K+T S
Sbjct: 422 YCDKVT-SGMGTLGRLPQLRVLDLGRTQVDNNSLENICTSSIPLVSLNLSHCKKITSISA 480
Query: 197 IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 256
IA L L++L + N C VT+ + L L L+ +++D+ S+ SL
Sbjct: 481 IASLTALEELNIDN--SCNVTSG-WNVFGTLHQLRVATLSNTRINDENIRHVSECKSLNT 537
Query: 257 LNLGF-NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSS 315
LNL F +ITD + L +T LE LNLD C +G+ L L + L + + +G
Sbjct: 538 LNLAFCKDITD--VTALSKITMLEELNLDCCPNIRKGIETLGKLPKARILSMKECYMGDG 595
Query: 316 GLRHLSGLTNLES---INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT 372
+ S L N +S +NL + + S++ L+ +++L+ L LD + + + S +
Sbjct: 596 YAQQCSILGNSKSLVKLNLERS-MGFISVKALSNIATLEELVLDHAE----EVCCIPSFS 650
Query: 373 GLTHLDLFGARITDSGAAYLRNF---KNLRSLEICG-GGLTD----AGLTGLVSLNVSNS 424
L L + + TD +N K+LRSL + +TD + L+ L LNV+
Sbjct: 651 CLPRLRVLNLKYTDINGDVTKNISESKSLRSLNLSHCKWVTDISVLSSLSTLEELNVNCC 710
Query: 425 RITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS-RDLPNLVSFRPE 472
G L L LR L + A DI L S + L L FR E
Sbjct: 711 NGIRKGWESLGKLPLLRVAILSDTNIAAKDIACLSSCKTLVKLKFFRCE 759
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 174/398 (43%), Gaps = 76/398 (19%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL---DLERCTRIHG--GLVNLKGL-- 154
L+ L L L FR NN I + ++ L +L D + T I G L NLK L
Sbjct: 173 LKRLHMLKRLCFRSNN-IDNNDARHLFNIVTLEELAITDTMQLTNIRGISRLTNLKCLEL 231
Query: 155 ----------------MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGI 197
KL L++ CN ITD+ P+S L L+ L + SC +T GI
Sbjct: 232 NSTDIDDSCIGEISACAKLSKLSVSECNNITDA--TPISQLAALEELNLNSCYHIT-KGI 288
Query: 198 AYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC-QLSD-------------- 242
L L +L +L+L G PV CL L GSL LN++ C QL+D
Sbjct: 289 ETLGMLLRLRMLDLSGVPVEDNCLKDLCDCGSLERLNISYCIQLTDINPLSNATAIEELN 348
Query: 243 -DGCEKFSK-------IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGL 293
+GC + ++ + L+VL++ +++ L + +L L+L++C G GD +
Sbjct: 349 LNGCRRITRGIGVVWALPKLRVLHMKDVHLSEPSLDSVGTGGSLVRLSLENCKGFGD--V 406
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS-SLKS 352
L+ L L+ L L +SG+ L L L ++L T + + SL + S L S
Sbjct: 407 KPLSNLVTLEELNLHYCDKVTSGMGTLGRLPQLRVLDLGRTQVDNNSLENICTSSIPLVS 466
Query: 353 LNLD-ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
LNL ++I T ++A+ SLT L L++ + SG LR
Sbjct: 467 LNLSHCKKI--TSISAIASLTALEELNIDNSCNVTSGWNVFGTLHQLR------------ 512
Query: 412 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
+SN+RI +RH+ K+L +L L CK
Sbjct: 513 ------VATLSNTRINDENIRHVSECKSLNTLNLAFCK 544
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 180/418 (43%), Gaps = 63/418 (15%)
Query: 98 GLEHLRGLSNLTSLS-FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLV-NLKGLM 155
G ++ LSN+ +L ++A + +F+ L L L+L + T I+G + N+
Sbjct: 619 GFISVKALSNIATLEELVLDHAEEVCCIPSFSCLPRLRVLNL-KYTDINGDVTKNISESK 677
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 215
L SLN+ C +TD + LS L+ L+ L ++C G L L L + L
Sbjct: 678 SLRSLNLSHCKWVTD--ISVLSSLSTLEELNVNCCNGIRKGWESLGKLPLLRVAILSDTN 735
Query: 216 VTAACLDSLSALGSLFYLNLNRCQ-LSD-------------------DGCEKFSKIGS-- 253
+ A + LS+ +L L RC+ LSD DG + + +G+
Sbjct: 736 IAAKDIACLSSCKTLVKLKFFRCEKLSDVTVVYKIQSLEELIVRSCSDGLKGLNDLGTLP 795
Query: 254 --------------LKVLNLGFN------------EITDECLVHLKGLTNLESLNLDSCG 287
+ V ++G + E+TD + L +T+LE L+L CG
Sbjct: 796 RLRFLLLRNVRGSDISVESIGTSKSLVRLHIEMRKELTD--ITPLSNITSLEELSLRECG 853
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAG 346
EG+ L L LK L+L + + +S L + ++ S+NL S ++D S ++
Sbjct: 854 DNLEGVGTLGKLPRLKSLDLGLSDISNSALNDIFLSRSITSLNLASSWKLTDIS--HISN 911
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDS-GAAYLRNFKNLRSLEICG 405
L++L+ LNL +G AL+ L L L+L A +T Y+ K+L +L +
Sbjct: 912 LTALEELNLRRCYPITSGWEALSELPRLRVLNLESASVTTRYDGYYISRCKSLVTLNLES 971
Query: 406 GGLTDAG----LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
+TDA + L L++ + G L L LR L L + D++ +Q
Sbjct: 972 CDMTDASCLANIKTLEELHIGRCKELRRGFSPLFTLPRLRILNLICSLIKDEDLREIQ 1029
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 17/198 (8%)
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY-LKGLQKLTL 208
++ L LE LN++ C IT S + LS L L+ L + + VT Y + + L
Sbjct: 908 HISNLTALEELNLRRCYPIT-SGWEALSELPRLRVLNLESASVTTRYDGYYISRCKSLVT 966
Query: 209 LNLEGCPVT-AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
LNLE C +T A+CL ++ L L ++ RC+ G + L++LNL + I DE
Sbjct: 967 LNLESCDMTDASCLANIKTLEEL---HIGRCKELRRGFSPLFTLPRLRILNLICSLIKDE 1023
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL------ELSDTQVGSSGLRHLS 321
L ++ +E LNL C E L ++T L +K + + D + + G R L
Sbjct: 1024 DLREIQPPHTIEELNLSYC----ENLNDITPLGRIKSIKKLHLRQSHDARRPTEGFRSLL 1079
Query: 322 GLTNLESINL-SFTGISD 338
L L ++L + G SD
Sbjct: 1080 ELPCLSWVDLNNVCGWSD 1097
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 139/319 (43%), Gaps = 37/319 (11%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEH----------------LRGLSN 107
LS +++ + L C L L F C ++SD + + L+GL++
Sbjct: 731 LSDTNIAAKDIACLSSCKTLVKLKFFRCEKLSDVTVVYKIQSLEELIVRSCSDGLKGLND 790
Query: 108 L-TSLSFRRNNAITAQG----MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
L T R +G +++ +LV+L +E + + L + LE L++
Sbjct: 791 LGTLPRLRFLLLRNVRGSDISVESIGTSKSLVRLHIEMRKEL-TDITPLSNITSLEELSL 849
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
+ C + + L L LKSL + S +++S + + + +T LNL +
Sbjct: 850 RECGDNLEG-VGTLGKLPRLKSLDLGLSDISNSALNDIFLSRSITSLNL-ASSWKLTDIS 907
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTNLESL 281
+S L +L LNL RC G E S++ L+VLNL +T ++ +L +L
Sbjct: 908 HISNLTALEELNLRRCYPITSGWEALSELPRLRVLNLESASVTTRYDGYYISRCKSLVTL 967
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS-----SGLRHLSGLTNLESINLSFTGI 336
NL+SC + D + L N+K LE + +G G L L L +NL + I
Sbjct: 968 NLESCDMTDA-----SCLANIKTLE--ELHIGRCKELRRGFSPLFTLPRLRILNLICSLI 1020
Query: 337 SDGSLRKLAGLSSLKSLNL 355
D LR++ +++ LNL
Sbjct: 1021 KDEDLREIQPPHTIEELNL 1039
>gi|298360122|gb|ADI77640.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALISPATISDGG 451
>gi|22347548|gb|AAM95919.1| internalin A precursor [Listeria monocytogenes]
gi|22347558|gb|AAM95924.1| internalin A precursor [Listeria monocytogenes]
gi|22347560|gb|AAM95925.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 42 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 95
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 96 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 147
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 148 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 200
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 201 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 254
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 255 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 312
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 313 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 370
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 371 NVSIPNTVKNVTGALIAPATISDGG 395
>gi|385800049|ref|YP_005836453.1| hypothetical protein [Halanaerobium praevalens DSM 2228]
gi|309389413|gb|ADO77293.1| conserved repeat domain protein [Halanaerobium praevalens DSM 2228]
Length = 2607
Score = 81.3 bits (199), Expect = 1e-12, Method: Composition-based stats.
Identities = 110/333 (33%), Positives = 155/333 (46%), Gaps = 47/333 (14%)
Query: 32 ALQDLCLGQYPGVNDK----WMDVIASQGSSLLSVDLS-GSDVTDSGLIHLKDCSNLQSL 86
A +D YPG+NDK + VI S+L L G D G I L + NL +L
Sbjct: 1017 AFKDQSGNAYPGMNDKTSWNFKTVINIPDSNLKQQILDRGIDNNGDGEISLSESVNLYTL 1076
Query: 87 DFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG 146
+F +ISD L GL + TSL KL L +I
Sbjct: 1077 K-SFYTEISD-----LSGLEHFTSLD----------------------KLALYGGKKI-S 1107
Query: 147 GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKL 206
L L+ L L SL + N I + D L+ LTNL L +S +K++D I+ L L KL
Sbjct: 1108 DLSPLQNLTNLNSLTLTE-NVINNIDY--LANLTNLTRLDLSSNKISD--ISVLANLTKL 1162
Query: 207 TLLNLEGCPVT-AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
T L L +T + L L L L +L+L ++S+ + S + L L+LG +
Sbjct: 1163 TELVLGSNIITDESDLSVLENLTELEHLSLEENEISN--IDSLSNLSKLNYLHLGSTNVE 1220
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
D + LK LT L LNL+S I DE L L+ +L L L + S + ++ LTN
Sbjct: 1221 D--ISSLKNLTALNFLNLNSTYINDEDLTILSNFKSLTELYLQSSNDKISDISVVADLTN 1278
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSL-NLDA 357
L+ + L + ISD +R L+ L+ L SL NL+A
Sbjct: 1279 LKYLYLGYNEISD--IRALSDLTKLTSLYNLNA 1309
Score = 62.0 bits (149), Expect = 6e-07, Method: Composition-based stats.
Identities = 76/235 (32%), Positives = 109/235 (46%), Gaps = 18/235 (7%)
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
SD+ L T+L L + K I+ L LQ LT NL +T ++++ L +L
Sbjct: 1084 SDLSGLEHFTSLDKLALYGGK----KISDLSPLQNLT--NLNSLTLTENVINNIDYLANL 1137
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLN---LGFNEITDEC-LVHLKGLTNLESLNLDSC 286
NL R LS + S + +L L LG N ITDE L L+ LT LE L+L+
Sbjct: 1138 --TNLTRLDLSSNKISDISVLANLTKLTELVLGSNIITDESDLSVLENLTELEHLSLEEN 1195
Query: 287 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAG 346
I + + +L+ L L L L T V + L LT L +NL+ T I+D L L+
Sbjct: 1196 EISN--IDSLSNLSKLNYLHLGSTNV--EDISSLKNLTALNFLNLNSTYINDEDLTILSN 1251
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
SL L L + + ++ + LT L +L L I+D A L + L SL
Sbjct: 1252 FKSLTELYLQSSNDKISDISVVADLTNLKYLYLGYNEISDIRA--LSDLTKLTSL 1304
Score = 61.2 bits (147), Expect = 1e-06, Method: Composition-based stats.
Identities = 75/229 (32%), Positives = 110/229 (48%), Gaps = 16/229 (6%)
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNL 302
DG S+ +L L + EI+D L L+ T+L+ L L G L L L NL
Sbjct: 1062 DGEISLSESVNLYTLKSFYTEISD--LSGLEHFTSLDKLALYG-GKKISDLSPLQNLTNL 1118
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
L L++ + + + +L+ LTNL ++LS ISD S+ LA L+ L L L + ITD
Sbjct: 1119 NSLTLTENVINN--IDYLANLTNLTRLDLSSNKISDISV--LANLTKLTELVLGSNIITD 1174
Query: 363 -TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLV 417
+ L+ L +LT L HL L I++ + L N L L + + D LT L
Sbjct: 1175 ESDLSVLENLTELEHLSLEENEISNIDS--LSNLSKLNYLHLGSTNVEDISSLKNLTALN 1232
Query: 418 SLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
LN++++ I L L K+L L L+S +DI + DL NL
Sbjct: 1233 FLNLNSTYINDEDLTILSNFKSLTELYLQSSNDKISDISVVA--DLTNL 1279
>gi|219821375|gb|ACL37828.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|219821279|gb|ACL37764.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|371942070|gb|AEX60847.1| internaline [Listeria monocytogenes]
Length = 789
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|371942068|gb|AEX60846.1| internaline [Listeria monocytogenes]
gi|371942088|gb|AEX60856.1| internaline [Listeria monocytogenes]
gi|371942106|gb|AEX60865.1| internaline [Listeria monocytogenes]
gi|371942134|gb|AEX60879.1| internaline [Listeria monocytogenes]
Length = 790
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|284800720|ref|YP_003412585.1| Internalin A [Listeria monocytogenes 08-5578]
gi|284993906|ref|YP_003415674.1| Internalin A [Listeria monocytogenes 08-5923]
gi|130774827|gb|ABO32426.1| InlA [Listeria monocytogenes]
gi|167862038|gb|ACA05718.1| InlA [Listeria monocytogenes]
gi|194326145|emb|CAQ77231.1| internalin A [Listeria monocytogenes]
gi|194326165|emb|CAQ77241.1| internalin A [Listeria monocytogenes]
gi|284056282|gb|ADB67223.1| Internalin A [Listeria monocytogenes 08-5578]
gi|284059373|gb|ADB70312.1| Internalin A [Listeria monocytogenes 08-5923]
gi|298359730|gb|ADI77444.1| internalin A [Listeria monocytogenes]
gi|298359786|gb|ADI77472.1| internalin A [Listeria monocytogenes]
gi|298359904|gb|ADI77531.1| internalin A [Listeria monocytogenes]
gi|298359978|gb|ADI77568.1| internalin A [Listeria monocytogenes]
gi|298360068|gb|ADI77613.1| internalin A [Listeria monocytogenes]
gi|298360228|gb|ADI77693.1| internalin A [Listeria monocytogenes]
gi|298360452|gb|ADI77805.1| internalin A [Listeria monocytogenes]
gi|298360556|gb|ADI77857.1| internalin A [Listeria monocytogenes]
gi|298360576|gb|ADI77867.1| internalin A [Listeria monocytogenes]
gi|298360600|gb|ADI77879.1| internalin A [Listeria monocytogenes]
gi|298360678|gb|ADI77918.1| internalin A [Listeria monocytogenes]
gi|443428872|gb|AGC92235.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|371942140|gb|AEX60882.1| internaline [Listeria monocytogenes]
Length = 790
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|112961619|gb|ABI28432.1| internalin A [Listeria monocytogenes]
gi|112961637|gb|ABI28444.1| internalin A [Listeria monocytogenes]
gi|112961655|gb|ABI28456.1| internalin A [Listeria monocytogenes]
gi|112961658|gb|ABI28458.1| internalin A [Listeria monocytogenes]
gi|112961766|gb|ABI28530.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 49 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 102
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 103 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 154
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 155 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 207
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 208 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 261
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 262 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 319
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 320 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 377
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 378 NVSIPNTVKNVTGALIAPATISDGG 402
>gi|112961772|gb|ABI28534.1| internalin A [Listeria monocytogenes]
Length = 748
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 49 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 102
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 103 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 154
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 155 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 207
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 208 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 261
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 262 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 319
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 320 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 377
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 378 NVSIPNTVKNVTGALIAPATISDGG 402
>gi|223698625|gb|ACN18990.1| internalin A [Listeria monocytogenes]
gi|223698736|gb|ACN19064.1| internalin A [Listeria monocytogenes]
gi|223698739|gb|ACN19066.1| internalin A [Listeria monocytogenes]
gi|223698847|gb|ACN19138.1| internalin A [Listeria monocytogenes]
gi|223698904|gb|ACN19176.1| internalin A [Listeria monocytogenes]
gi|223698955|gb|ACN19210.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|112959536|gb|ABI27295.1| internalin A [Listeria monocytogenes]
gi|112959546|gb|ABI27300.1| internalin A [Listeria monocytogenes]
Length = 734
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 35 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 88
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 89 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 140
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 141 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 193
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 194 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 247
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 248 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 305
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 306 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 363
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 364 NVSIPNTVKNVTGALIAPATISDGG 388
>gi|290982223|ref|XP_002673830.1| predicted protein [Naegleria gruberi]
gi|284087416|gb|EFC41086.1| predicted protein [Naegleria gruberi]
Length = 572
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 149/322 (46%), Gaps = 56/322 (17%)
Query: 151 LKGLMKLESLNIKWC----NCITDSDMKPLSGLTNLKSLQ-ISCSKVTDSGIAYLKGLQK 205
+ + KLES+ +C N + + +MK +S L NLK IS ++ + + L L+K
Sbjct: 214 FEHIRKLESITDLFCLTFRNNLFEEEMKFISPLGNLKKFHFISKGRIKEEAVKDLSTLKK 273
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLN--------LNRCQLSD-------------DG 244
L L+L+ +TA L + SL N +N C LS+ G
Sbjct: 274 LEELHLDNNLITACNFPYLENMKSLNLQNNRIGNEGAINLCSLSNLTELNLSNNLIGGQG 333
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
+ F K+ LK+LNL N++ D +L LE+L+L IG+EGL N L LK
Sbjct: 334 LKYFYKLSQLKILNLSSNQVGDVGANYLSENVKLENLSLKESLIGEEGLRNFGNLKLLKY 393
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL-------------------- 344
L L++ ++G+ GL++LS LE +++ I D S+ +L
Sbjct: 394 LMLNNNKIGN-GLKYLSNCNELEYLHVGSNDIGDESVIELFRSEFRNLIHLDISHNYVSY 452
Query: 345 ------AGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK- 396
+ ++ LK LN+ + I DTGL+ L+ L+ + L+ ++DSG NF+
Sbjct: 453 KCCDVISKMNQLKELNISNNPSIGDTGLSLLSPLS-IIKLEANNCGVSDSGIIDYLNFEP 511
Query: 397 NLRSLEICGGGLTDAGLTGLVS 418
+ +L I L++ L L+S
Sbjct: 512 KISTLHIKSNKLSNMTLQALIS 533
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 139/295 (47%), Gaps = 15/295 (5%)
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC 141
NL+ F +I + ++ L L L L NN ITA F L N+ L+L+
Sbjct: 248 NLKKFHFISKGRIKEEAVKDLSTLKKLEELHLD-NNLITACN---FPYLENMKSLNLQNN 303
Query: 142 TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLK 201
+ G +NL L L LN+ N I +K L+ LK L +S ++V D G YL
Sbjct: 304 RIGNEGAINLCSLSNLTELNLS-NNLIGGQGLKYFYKLSQLKILNLSSNQVGDVGANYLS 362
Query: 202 GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF 261
KL L+L+ + L + L L YL LN ++ +G + S L+ L++G
Sbjct: 363 ENVKLENLSLKESLIGEEGLRNFGNLKLLKYLMLNNNKIG-NGLKYLSNCNELEYLHVGS 421
Query: 262 NEITDECLVHL--KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ-VGSSGLR 318
N+I DE ++ L NL L++ + + ++ + LK L +S+ +G +GL
Sbjct: 422 NDIGDESVIELFRSEFRNLIHLDISHNYVSYKCCDVISKMNQLKELNISNNPSIGDTGLS 481
Query: 319 HLSGLT--NLESINLSFTGISD-GSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
LS L+ LE+ N G+SD G + L + +L++ + ++++ L AL S
Sbjct: 482 LLSPLSIIKLEANN---CGVSDSGIIDYLNFEPKISTLHIKSNKLSNMTLQALIS 533
>gi|112961646|gb|ABI28450.1| internalin A [Listeria monocytogenes]
gi|112961721|gb|ABI28500.1| internalin A [Listeria monocytogenes]
gi|112961757|gb|ABI28524.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 49 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 102
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 103 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 154
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 155 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 207
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 208 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 261
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 262 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 319
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 320 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 377
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 378 NVSIPNTVKNVTGALIAPATISDGG 402
>gi|112961622|gb|ABI28434.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 49 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 102
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 103 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 154
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 155 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 207
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 208 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 261
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 262 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 319
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 320 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 377
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 378 NVSIPNTVKNVTGALIAPATISDGG 402
>gi|112959552|gb|ABI27303.1| internalin A [Listeria monocytogenes]
gi|112959556|gb|ABI27305.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 35 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 88
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 89 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 140
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 141 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 193
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 194 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 247
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 248 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 305
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 306 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 363
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 364 NVSIPNTVKNVTGALIAPATISDGG 388
>gi|298360700|gb|ADI77929.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|112959438|gb|ABI27246.1| internalin A [Listeria monocytogenes]
gi|112959450|gb|ABI27252.1| internalin A [Listeria monocytogenes]
gi|112959456|gb|ABI27255.1| internalin A [Listeria monocytogenes]
gi|112959496|gb|ABI27275.1| internalin A [Listeria monocytogenes]
gi|112959498|gb|ABI27276.1| internalin A [Listeria monocytogenes]
gi|112959526|gb|ABI27290.1| internalin A [Listeria monocytogenes]
gi|112959528|gb|ABI27291.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 35 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 88
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 89 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 140
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 141 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 193
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 194 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 247
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 248 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 305
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 306 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 363
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 364 NVSIPNTVKNVTGALIAPATISDGG 388
>gi|219821276|gb|ACL37762.1| internalin A [Listeria monocytogenes]
gi|219821336|gb|ACL37802.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|219821273|gb|ACL37760.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDIVMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT ++ L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRISELGLNDQEWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|112961700|gb|ABI28486.1| internalin A [Listeria monocytogenes]
Length = 748
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 49 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 102
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 103 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 154
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 155 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 207
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 208 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 261
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 262 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 319
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 320 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 377
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 378 NVSIPNTVKNVTGALIAPATISDGG 402
>gi|219821339|gb|ACL37804.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|371942076|gb|AEX60850.1| internaline [Listeria monocytogenes]
gi|371942078|gb|AEX60851.1| internaline [Listeria monocytogenes]
gi|371942082|gb|AEX60853.1| internaline [Listeria monocytogenes]
Length = 789
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|112961616|gb|ABI28430.1| internalin A [Listeria monocytogenes]
gi|112961649|gb|ABI28452.1| internalin A [Listeria monocytogenes]
gi|112961652|gb|ABI28454.1| internalin A [Listeria monocytogenes]
gi|112961664|gb|ABI28462.1| internalin A [Listeria monocytogenes]
gi|112961691|gb|ABI28480.1| internalin A [Listeria monocytogenes]
gi|112961718|gb|ABI28498.1| internalin A [Listeria monocytogenes]
gi|112961727|gb|ABI28504.1| internalin A [Listeria monocytogenes]
gi|112961748|gb|ABI28518.1| internalin A [Listeria monocytogenes]
gi|112961751|gb|ABI28520.1| internalin A [Listeria monocytogenes]
gi|112961769|gb|ABI28532.1| internalin A [Listeria monocytogenes]
gi|112961775|gb|ABI28536.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 49 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 102
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 103 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 154
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 155 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 207
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 208 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 261
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 262 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 319
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 320 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 377
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 378 NVSIPNTVKNVTGALIAPATISDGG 402
>gi|112959508|gb|ABI27281.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 35 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 88
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 89 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 140
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 141 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 193
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 194 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 247
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 248 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 305
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 306 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 363
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 364 NVSIPNTVKNVTGALIAPATISDGG 388
>gi|112959452|gb|ABI27253.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 35 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 88
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 89 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 140
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 141 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 193
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 194 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 247
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 248 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 305
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 306 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 363
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 364 NVSIPNTVKNVTGALIAPATISDGG 388
>gi|112959518|gb|ABI27286.1| internalin A [Listeria monocytogenes]
gi|112959520|gb|ABI27287.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 35 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 88
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 89 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 140
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 141 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 193
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 194 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 247
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 248 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 305
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 306 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 363
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 364 NVSIPNTVKNVTGALIAPATISDGG 388
>gi|290992226|ref|XP_002678735.1| predicted protein [Naegleria gruberi]
gi|284092349|gb|EFC45991.1| predicted protein [Naegleria gruberi]
Length = 445
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 172/371 (46%), Gaps = 21/371 (5%)
Query: 47 KWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGL 105
KW IA Q L S+++S V G + L LD +F I G + + +
Sbjct: 80 KWAANIA-QLEQLKSLEISSDHKVGYDGAKVIGQLKQLTKLDISFNT-IGAEGAKFIGEM 137
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHG------GLVNLKGLMKL 157
LT L+ N++T++G++ + L NL L++ R G G L+ L KL
Sbjct: 138 QQLTYLNIY-GNSLTSEGIRFISQLTNLTYLNVRFNEDFRFGGHDKGLEGAQYLRNLQKL 196
Query: 158 ESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
SL+I + N I + K + + +L L I + + G+ +L L+ L LL++ +
Sbjct: 197 TSLDIGY-NQIGNDGAKFIGEIQSLTELTIRNNNLKAEGVRWLSKLKNLRLLSINNNHIK 255
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK-IGSLKVLNLGFNEITD--ECLVHLKG 274
+ + L L +L+L +++ +G E SK + + L++ N I D + L +K
Sbjct: 256 DEGVVHICKLKQLTHLDLWNTEITAEGIELVSKQLPKVTHLHISINVIRDGTKFLGEMKQ 315
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
LT LE+ D + EGL L GL L L +++ G+ G + +S + LE + ++
Sbjct: 316 LTTLEA---DEIELDAEGLKYLVGLKKLNFLSVNNNLFGAEGCKVVSEMKQLEELCMNDN 372
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS--LTGLTHLDLFGARITDSGAAYL 392
I D ++ L L SL SL L I G+ L S L LT LD+ G +IT S +
Sbjct: 373 NIGDNGVQYLCELKSLTSLCLWNNNIGIEGVKLLCSGNLNNLTTLDIRGNQITKSDSHLF 432
Query: 393 RNFKNLRSLEI 403
N K L L I
Sbjct: 433 ENMKQLTELLI 443
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 157/375 (41%), Gaps = 66/375 (17%)
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG 196
D + T N+ L +L+SL I + + K + L L L IS + + G
Sbjct: 71 DNTKITEFTKWAANIAQLEQLKSLEISSDHKVGYDGAKVIGQLKQLTKLDISFNTIGAEG 130
Query: 197 IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN---------------------- 234
++ +Q+LT LN+ G +T+ + +S L +L YLN
Sbjct: 131 AKFIGEMQQLTYLNIYGNSLTSEGIRFISQLTNLTYLNVRFNEDFRFGGHDKGLEGAQYL 190
Query: 235 ----------LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
+ Q+ +DG + +I SL L + N + E + L L NL L+++
Sbjct: 191 RNLQKLTSLDIGYNQIGNDGAKFIGEIQSLTELTIRNNNLKAEGVRWLSKLKNLRLLSIN 250
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG-LTNLESINLSFTGISDGSLRK 343
+ I DEG+V++ L L L+L +T++ + G+ +S L + +++S I DG+ +
Sbjct: 251 NNHIKDEGVVHICKLKQLTHLDLWNTEITAEGIELVSKQLPKVTHLHISINVIRDGT-KF 309
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL----DLFGAR---------------- 383
L + L +L D ++ GL L L L L +LFGA
Sbjct: 310 LGEMKQLTTLEADEIELDAEGLKYLVGLKKLNFLSVNNNLFGAEGCKVVSEMKQLEELCM 369
Query: 384 ----ITDSGAAYLRNFKNLRSLEICGGGLTDAG--------LTGLVSLNVSNSRITSAGL 431
I D+G YL K+L SL + + G L L +L++ ++IT +
Sbjct: 370 NDNNIGDNGVQYLCELKSLTSLCLWNNNIGIEGVKLLCSGNLNNLTTLDIRGNQITKSDS 429
Query: 432 RHLKPLKNLRSLTLE 446
+ +K L L +E
Sbjct: 430 HLFENMKQLTELLIE 444
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 139/328 (42%), Gaps = 47/328 (14%)
Query: 163 KWCNCITDSDMKP----------------LSGLTNLKSLQISC-SKVTDSGIAYLKGLQK 205
K+ NC+TD + ++ L LKSL+IS KV G + L++
Sbjct: 56 KFKNCVTDLKLTHTADNTKITEFTKWAANIAQLEQLKSLEISSDHKVGYDGAKVIGQLKQ 115
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
LT L++ + A + + L YLN+ L+ +G S++ +L LN+ FNE
Sbjct: 116 LTKLDISFNTIGAEGAKFIGEMQQLTYLNIYGNSLTSEGIRFISQLTNLTYLNVRFNE-- 173
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
G EG L L L L++ Q+G+ G + + + +
Sbjct: 174 --------------DFRFGGHDKGLEGAQYLRNLQKLTSLDIGYNQIGNDGAKFIGEIQS 219
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L + + + +R L+ L +L+ L+++ I D G+ + L LTHLDL+ IT
Sbjct: 220 LTELTIRNNNLKAEGVRWLSKLKNLRLLSINNNHIKDEGVVHICKLKQLTHLDLWNTEIT 279
Query: 386 DSGAAYL-RNFKNLRSLEICGGGLTDAG-----LTGLVSLNVSNSRITSAGLRHLKPLKN 439
G + + + L I + D + L +L + + GL++L LK
Sbjct: 280 AEGIELVSKQLPKVTHLHISINVIRDGTKFLGEMKQLTTLEADEIELDAEGLKYLVGLKK 339
Query: 440 LRSLTL-------ESCKVTANDIKRLQS 460
L L++ E CKV + ++K+L+
Sbjct: 340 LNFLSVNNNLFGAEGCKVVS-EMKQLEE 366
>gi|194239378|emb|CAQ76829.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNKISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|298360360|gb|ADI77759.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|219821366|gb|ACL37822.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|112959468|gb|ABI27261.1| internalin A [Listeria monocytogenes]
Length = 730
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 28 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 81
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 82 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 133
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 134 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 186
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 187 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 240
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 241 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 298
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 299 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 356
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 357 NVSIPNTVKNVTGALIAPATISDGG 381
>gi|298360648|gb|ADI77903.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|112961697|gb|ABI28484.1| internalin A [Listeria monocytogenes]
gi|112961709|gb|ABI28492.1| internalin A [Listeria monocytogenes]
gi|112961730|gb|ABI28506.1| internalin A [Listeria monocytogenes]
gi|112961760|gb|ABI28526.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 49 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 102
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 103 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 154
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 155 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 207
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 208 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 261
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 262 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 319
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 320 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 377
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 378 NVSIPNTVKNVTGALIAPATISDGG 402
>gi|112959446|gb|ABI27250.1| internalin A [Listeria monocytogenes]
gi|112959466|gb|ABI27260.1| internalin A [Listeria monocytogenes]
gi|112959470|gb|ABI27262.1| internalin A [Listeria monocytogenes]
gi|112959474|gb|ABI27264.1| internalin A [Listeria monocytogenes]
gi|112959476|gb|ABI27265.1| internalin A [Listeria monocytogenes]
gi|112959478|gb|ABI27266.1| internalin A [Listeria monocytogenes]
gi|112959484|gb|ABI27269.1| internalin A [Listeria monocytogenes]
gi|112959486|gb|ABI27270.1| internalin A [Listeria monocytogenes]
gi|112959492|gb|ABI27273.1| internalin A [Listeria monocytogenes]
gi|112959494|gb|ABI27274.1| internalin A [Listeria monocytogenes]
gi|112959504|gb|ABI27279.1| internalin A [Listeria monocytogenes]
gi|112959516|gb|ABI27285.1| internalin A [Listeria monocytogenes]
gi|112959532|gb|ABI27293.1| internalin A [Listeria monocytogenes]
gi|112959534|gb|ABI27294.1| internalin A [Listeria monocytogenes]
gi|112959540|gb|ABI27297.1| internalin A [Listeria monocytogenes]
gi|112959544|gb|ABI27299.1| internalin A [Listeria monocytogenes]
gi|112959550|gb|ABI27302.1| internalin A [Listeria monocytogenes]
gi|112959554|gb|ABI27304.1| internalin A [Listeria monocytogenes]
gi|112959558|gb|ABI27306.1| internalin A [Listeria monocytogenes]
gi|112959560|gb|ABI27307.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 35 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 88
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 89 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 140
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 141 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 193
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 194 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 247
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 248 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 305
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 306 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 363
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 364 NVSIPNTVKNVTGALIAPATISDGG 388
>gi|223698613|gb|ACN18982.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 182/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL+ L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLISLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T + L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQVGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|112961679|gb|ABI28472.1| internalin A [Listeria monocytogenes]
gi|112961682|gb|ABI28474.1| internalin A [Listeria monocytogenes]
gi|112961685|gb|ABI28476.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 49 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 102
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 103 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 154
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 155 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 207
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 208 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 261
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 262 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 319
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 320 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 377
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 378 NVSIPNTVKNVTGALIAPATISDGG 402
>gi|112961694|gb|ABI28482.1| internalin A [Listeria monocytogenes]
gi|112961706|gb|ABI28490.1| internalin A [Listeria monocytogenes]
gi|112961763|gb|ABI28528.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 49 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 102
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 103 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 154
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 155 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 207
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 208 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 261
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 262 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 319
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 320 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 377
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 378 NVSIPNTVKNVTGALIAPATISDGG 402
>gi|112959506|gb|ABI27280.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 35 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 88
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 89 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 140
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 141 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 193
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 194 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 247
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 248 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 305
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 306 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 363
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 364 NVSIPNTVKNVTGALIAPATISDGG 388
>gi|428303964|ref|YP_007140789.1| hypothetical protein Cri9333_0293 [Crinalium epipsammum PCC 9333]
gi|428245499|gb|AFZ11279.1| leucine-rich repeat-containing protein [Crinalium epipsammum PCC
9333]
Length = 409
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 150/298 (50%), Gaps = 33/298 (11%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
++ DS + L+ ++ LD N +I+ LE ++ L NLT L N +
Sbjct: 128 EIPDSKRLTLEVLQGIKVLDANNA-EIT--SLEGIQALRNLTILRLDGNKI---SDVTPL 181
Query: 128 AGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
AGL NL L L+ H + ++K L L +L++ + N SD+ PL+GL NL+ L++
Sbjct: 182 AGLTNLRNLRLD-----HSQISDVKPLTGLTNLSVLYLNKNQISDVTPLAGLINLRDLRL 236
Query: 188 SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF-YLNLNRCQLSD--DG 244
++++D + L G L+NL G + + +S + LF ++NL L+D D
Sbjct: 237 DQNQISD--VTPLAG-----LINLRGLGLDQ---NQISDVKPLFGFVNLTTLYLNDNSDV 286
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
FS + +L VL L N+I+D + L LTNL L LD I D + L L L
Sbjct: 287 TPLFS-LANLTVLTLYDNKISD--VKPLTALTNLTVLELDQNQISD--VKPLASLARLTR 341
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
L L+D Q+ S + L+GL L S+ LS ISD ++ L GL++L L L I++
Sbjct: 342 LSLNDNQI--SDVEPLAGLAKLTSLRLSQNQISD--VKPLTGLTNLSGLGLSDNPISN 395
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 139/291 (47%), Gaps = 46/291 (15%)
Query: 145 HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQ 204
+ + +L+G+ L +L I + SD+ PL+GLTNL++L++ S+++D + L GL
Sbjct: 150 NAEITSLEGIQALRNLTILRLDGNKISDVTPLAGLTNLRNLRLDHSQISD--VKPLTGLT 207
Query: 205 KLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI 264
L S+ YLN N Q+SD + + +L+ L L N+I
Sbjct: 208 NL----------------------SVLYLNKN--QISD--VTPLAGLINLRDLRLDQNQI 241
Query: 265 TDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLT 324
+D + L GL NL L LD I D + L G NL L L+D +S + L L
Sbjct: 242 SD--VTPLAGLINLRGLGLDQNQISD--VKPLFGFVNLTTLYLND----NSDVTPLFSLA 293
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI 384
NL + L ISD ++ L L++L L LD QI+D + L SL LT L L +I
Sbjct: 294 NLTVLTLYDNKISD--VKPLTALTNLTVLELDQNQISD--VKPLASLARLTRLSLNDNQI 349
Query: 385 TDSGAAYLRNFKNLRSLEICGGGLTDA----GLTGLVSLNVSNSRITSAGL 431
+D L L SL + ++D GLT L L +S++ I++ L
Sbjct: 350 SD--VEPLAGLAKLTSLRLSQNQISDVKPLTGLTNLSGLGLSDNPISNCQL 398
>gi|150371828|dbj|BAF65703.1| internalin A [Listeria monocytogenes]
Length = 526
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQL--SFGNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|290997880|ref|XP_002681509.1| predicted protein [Naegleria gruberi]
gi|284095133|gb|EFC48765.1| predicted protein [Naegleria gruberi]
Length = 226
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 5/202 (2%)
Query: 216 VTAACLDS-----LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
V+ LDS +S + L L + ++ D+G + S++ L L + N+I + +
Sbjct: 9 VSENLLDSDNVKFISEMKQLVALFVPTNRIGDEGTKLISEMKQLISLGISKNQIGAKGVK 68
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
+L L L +L+++ IGDEG ++ + L L + D Q+G G++++S + L +
Sbjct: 69 YLCKLKQLIALDINRNRIGDEGAKLISKMKQLTLLHVGDNQIGVKGVKYISEMKQLTCLY 128
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
+ GI D + ++G+ L L++ +I D G ++ + LT L +F RI D GA
Sbjct: 129 IYGNGIGDEGAKLISGMKQLTELSIGHNEIGDEGAKFISEMKQLTELSIFYNRIGDEGAK 188
Query: 391 YLRNFKNLRSLEICGGGLTDAG 412
Y+ K L L+I + D G
Sbjct: 189 YISEMKQLTDLDIRHNRIGDKG 210
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 112/222 (50%), Gaps = 1/222 (0%)
Query: 160 LNIKWCNCITDSD-MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
+N+ + DSD +K +S + L +L + +++ D G + +++L L + + A
Sbjct: 5 VNVNVSENLLDSDNVKFISEMKQLVALFVPTNRIGDEGTKLISEMKQLISLGISKNQIGA 64
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
+ L L L L++NR ++ D+G + SK+ L +L++G N+I + + ++ + L
Sbjct: 65 KGVKYLCKLKQLIALDINRNRIGDEGAKLISKMKQLTLLHVGDNQIGVKGVKYISEMKQL 124
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
L + GIGDEG ++G+ L L + ++G G + +S + L +++ + I D
Sbjct: 125 TCLYIYGNGIGDEGAKLISGMKQLTELSIGHNEIGDEGAKFISEMKQLTELSIFYNRIGD 184
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
+ ++ + L L++ +I D G ++ + L L L+
Sbjct: 185 EGAKYISEMKQLTDLDIRHNRIGDKGEKLISGMKKLKRLCLY 226
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 6/182 (3%)
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
+ L +L + + IGDEG ++ + L L +S Q+G+ G+++L L L +++++
Sbjct: 25 MKQLVALFVPTNRIGDEGTKLISEMKQLISLGISKNQIGAKGVKYLCKLKQLIALDINRN 84
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
I D + ++ + L L++ QI G+ ++ + LT L ++G I D GA +
Sbjct: 85 RIGDEGAKLISKMKQLTLLHVGDNQIGVKGVKYISEMKQLTCLYIYGNGIGDEGAKLISG 144
Query: 395 FKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
K L L I + D G + L L++ +RI G +++ +K L L +
Sbjct: 145 MKQLTELSIGHNEIGDEGAKFISEMKQLTELSIFYNRIGDEGAKYISEMKQLTDLDIRHN 204
Query: 449 KV 450
++
Sbjct: 205 RI 206
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
+I D G + + + L SL +N I A+G+K L L+ LD+ R
Sbjct: 37 RIGDEGTKLISEMKQLISLGISKNQ-IGAKGVKYLCKLKQLIALDINR------------ 83
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
N I D K +S + L L + +++ G+ Y+ +++LT L +
Sbjct: 84 -------------NRIGDEGAKLISKMKQLTLLHVGDNQIGVKGVKYISEMKQLTCLYIY 130
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
G + +S + L L++ ++ D+G + S++ L L++ +N I DE ++
Sbjct: 131 GNGIGDEGAKLISGMKQLTELSIGHNEIGDEGAKFISEMKQLTELSIFYNRIGDEGAKYI 190
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
+ L L++ IGD+G ++G+ LK L
Sbjct: 191 SEMKQLTDLDIRHNRIGDKGEKLISGMKKLKRL 223
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
++ + L L + ++G G + +S + L S+ +S I ++ L L L +L++
Sbjct: 22 ISEMKQLVALFVPTNRIGDEGTKLISEMKQLISLGISKNQIGAKGVKYLCKLKQLIALDI 81
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----- 410
+ +I D G ++ + LT L + +I G Y+ K L L I G G+ D
Sbjct: 82 NRNRIGDEGAKLISKMKQLTLLHVGDNQIGVKGVKYISEMKQLTCLYIYGNGIGDEGAKL 141
Query: 411 -AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
+G+ L L++ ++ I G + + +K L L++
Sbjct: 142 ISGMKQLTELSIGHNEIGDEGAKFISEMKQLTELSI 177
>gi|85679234|gb|ABC72033.1| InlA [Listeria monocytogenes]
Length = 794
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 179/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 97 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 150
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 151 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 202
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 203 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 255
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 256 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 309
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS------------- 340
L GL L LEL++ Q+ + +S L NL + L F ISD S
Sbjct: 310 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSNLTKLQRLFF 367
Query: 341 -------LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
+ LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 368 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 425
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 426 NVSIPNTVKNVTGALIAPATISDGG 450
>gi|294358393|gb|ADE73849.1| InlA [Listeria monocytogenes]
Length = 800
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL + G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKEIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|290996873|ref|XP_002681006.1| predicted protein [Naegleria gruberi]
gi|284094629|gb|EFC48262.1| predicted protein [Naegleria gruberi]
Length = 207
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 103/201 (51%)
Query: 203 LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
+++LT LN+ G + +S + L L+++R ++ +G + S++ L LN+ +N
Sbjct: 1 MKQLTSLNIGGNEIGVEGAKYMSEMKHLTSLDIHRNEIGVEGSKFISEMKHLTSLNIYYN 60
Query: 263 EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG 322
EI E ++ + +L SLN+ IG EG ++ + L L ++D ++G G + +S
Sbjct: 61 EIGVEGSKYISEMKHLTSLNIGDNEIGVEGSKYISEMKQLTSLNIADNEIGVEGSKFISE 120
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
+ +L S+ + + I + ++ + L SLN+ QI D G ++ + LT L++
Sbjct: 121 MKHLTSLYIYYNEIGVEGAKFISEMKHLTSLNISGNQIGDEGSKFISEMKSLTSLNIGDN 180
Query: 383 RITDSGAAYLRNFKNLRSLEI 403
I GA ++ K L SL I
Sbjct: 181 EIGVEGAKFISGMKQLTSLNI 201
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 99/199 (49%), Gaps = 6/199 (3%)
Query: 254 LKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVG 313
L LN+G NEI E ++ + +L SL++ IG EG ++ + +L L + ++G
Sbjct: 4 LTSLNIGGNEIGVEGAKYMSEMKHLTSLDIHRNEIGVEGSKFISEMKHLTSLNIYYNEIG 63
Query: 314 SSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 373
G +++S + +L S+N+ I + ++ + L SLN+ +I G ++ +
Sbjct: 64 VEGSKYISEMKHLTSLNIGDNEIGVEGSKYISEMKQLTSLNIADNEIGVEGSKFISEMKH 123
Query: 374 LTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRIT 427
LT L ++ I GA ++ K+L SL I G + D G + L SLN+ ++ I
Sbjct: 124 LTSLYIYYNEIGVEGAKFISEMKHLTSLNISGNQIGDEGSKFISEMKSLTSLNIGDNEIG 183
Query: 428 SAGLRHLKPLKNLRSLTLE 446
G + + +K L SL ++
Sbjct: 184 VEGAKFISGMKQLTSLNID 202
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 100/201 (49%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+ L SL I +++ G Y+ ++ LT L++ + +S + L LN+
Sbjct: 1 MKQLTSLNIGGNEIGVEGAKYMSEMKHLTSLDIHRNEIGVEGSKFISEMKHLTSLNIYYN 60
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
++ +G + S++ L LN+G NEI E ++ + L SLN+ IG EG ++
Sbjct: 61 EIGVEGSKYISEMKHLTSLNIGDNEIGVEGSKYISEMKQLTSLNIADNEIGVEGSKFISE 120
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
+ +L L + ++G G + +S + +L S+N+S I D + ++ + SL SLN+
Sbjct: 121 MKHLTSLYIYYNEIGVEGAKFISEMKHLTSLNISGNQIGDEGSKFISEMKSLTSLNIGDN 180
Query: 359 QITDTGLAALTSLTGLTHLDL 379
+I G ++ + LT L++
Sbjct: 181 EIGVEGAKFISGMKQLTSLNI 201
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 26/227 (11%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW 164
+ LTSL+ N I +G K + + +L LD+ R
Sbjct: 1 MKQLTSLNIG-GNEIGVEGAKYMSEMKHLTSLDIHR------------------------ 35
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
N I K +S + +L SL I +++ G Y+ ++ LT LN+ + +
Sbjct: 36 -NEIGVEGSKFISEMKHLTSLNIYYNEIGVEGSKYISEMKHLTSLNIGDNEIGVEGSKYI 94
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
S + L LN+ ++ +G + S++ L L + +NEI E + + +L SLN+
Sbjct: 95 SEMKQLTSLNIADNEIGVEGSKFISEMKHLTSLYIYYNEIGVEGAKFISEMKHLTSLNIS 154
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
IGDEG ++ + +L L + D ++G G + +SG+ L S+N+
Sbjct: 155 GNQIGDEGSKFISEMKSLTSLNIGDNEIGVEGAKFISGMKQLTSLNI 201
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 102/208 (49%), Gaps = 1/208 (0%)
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
+ +L SLNI N I K +S + +L SL I +++ G ++ ++ LT LN+
Sbjct: 1 MKQLTSLNI-GGNEIGVEGAKYMSEMKHLTSLDIHRNEIGVEGSKFISEMKHLTSLNIYY 59
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
+ +S + L LN+ ++ +G + S++ L LN+ NEI E +
Sbjct: 60 NEIGVEGSKYISEMKHLTSLNIGDNEIGVEGSKYISEMKQLTSLNIADNEIGVEGSKFIS 119
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
+ +L SL + IG EG ++ + +L L +S Q+G G + +S + +L S+N+
Sbjct: 120 EMKHLTSLYIYYNEIGVEGAKFISEMKHLTSLNISGNQIGDEGSKFISEMKSLTSLNIGD 179
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQIT 361
I + ++G+ L SLN+D ++
Sbjct: 180 NEIGVEGAKFISGMKQLTSLNIDDNELV 207
>gi|27574254|pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
gi|27574256|pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
gi|27574257|pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
gi|27574258|pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 68 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 121
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 122 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQL--SFGNQVTD--LKPL 173
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 174 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 226
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 227 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 280
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 281 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 338
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 339 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 396
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 397 NVSIPNTVKNVTGALIAPATISDGG 421
>gi|223698748|gb|ACN19072.1| truncated internalin A [Listeria monocytogenes]
gi|223698961|gb|ACN19214.1| truncated internalin A [Listeria monocytogenes]
Length = 491
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 67 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQL--SFGNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|254828935|ref|ZP_05233622.1| internalin A [Listeria monocytogenes FSL N3-165]
gi|130774797|gb|ABO32413.1| InlA [Listeria monocytogenes]
gi|130774811|gb|ABO32418.1| InlA [Listeria monocytogenes]
gi|194239388|emb|CAQ76834.1| internalin A [Listeria monocytogenes]
gi|258601346|gb|EEW14671.1| internalin A [Listeria monocytogenes FSL N3-165]
gi|298360424|gb|ADI77791.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|83747318|ref|ZP_00944359.1| Leucine-rich repeat family protein [Ralstonia solanacearum UW551]
gi|207739111|ref|YP_002257504.1| type III effector protein gala2 [Ralstonia solanacearum IPO1609]
gi|83726018|gb|EAP73155.1| Leucine-rich repeat family protein [Ralstonia solanacearum UW551]
gi|206592484|emb|CAQ59390.1| type III effector protein gala2 [Ralstonia solanacearum IPO1609]
Length = 978
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 182/411 (44%), Gaps = 30/411 (7%)
Query: 58 SLLSVDLSG---SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
S+ +DLSG S V+++GL L L+SLD + +I D ++ L ++LTSL+
Sbjct: 575 SVRHLDLSGCTGSAVSEAGLAVLARLP-LESLDLS-GTRIGDREVQALASSTSLTSLNLS 632
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N I G +A L L++ G+ L L SL ++ I ++ +
Sbjct: 633 -GNRIGNAGAQALGRNTVLTALNVSANPIGDAGVQALADSRSLTSLELRGIG-IGEAGIA 690
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L+ T L+SL IS + +++ A L Q L L C +T + L+ + SL L
Sbjct: 691 ALASNTVLRSLDISSNDLSEQSAAELARNQTLASLKANACGLTNSMAQQLARIRSLRTLE 750
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
+ + D G ++ SL+ LNL N IT + L L+ L SL++ G GD G +
Sbjct: 751 VGSNSIGDTGVLAIARNASLRTLNLSHNPITLQGLRPLELSRTLTSLDVSGIGCGDRGAL 810
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
L+ L L+L +GS+G + L+ L S++L I + + LA L SLN
Sbjct: 811 LLSKNRALTSLKLGFNGIGSAGAQGLAANRTLISLDLRGNTIDVDAAKALANTGCLTSLN 870
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT 414
+ ++ D +AL LT LD+ R++ A L AG
Sbjct: 871 VSDCKLDDEAASALAESLTLTSLDVSVNRLSGQAARAL------------------AGNA 912
Query: 415 GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 465
L SLN+S++ I G + L S +L S AN I +R L N
Sbjct: 913 TLTSLNISHNHIGPDGAQALA-----ESPSLTSLDARANGIGEAGARALEN 958
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 156/351 (44%), Gaps = 4/351 (1%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
+ D+ + +AS +SL S++LSG+ + ++G L + L +L+ + I D G++ L
Sbjct: 612 IGDREVQALASS-TSLTSLNLSGNRIGNAGAQALGRNTVLTALNVS-ANPIGDAGVQALA 669
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
+LTSL R I G+ A A L LD+ L L SL
Sbjct: 670 DSRSLTSLELR-GIGIGEAGIAALASNTVLRSLDISSNDLSEQSAAELARNQTLASLKAN 728
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
C +T+S + L+ + +L++L++ + + D+G+ + L LNL P+T L
Sbjct: 729 ACG-LTNSMAQQLARIRSLRTLEVGSNSIGDTGVLAIARNASLRTLNLSHNPITLQGLRP 787
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
L +L L+++ D G SK +L L LGFN I L L SL+L
Sbjct: 788 LELSRTLTSLDVSGIGCGDRGALLLSKNRALTSLKLGFNGIGSAGAQGLAANRTLISLDL 847
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
I + L L L +SD ++ L+ L S+++S +S + R
Sbjct: 848 RGNTIDVDAAKALANTGCLTSLNVSDCKLDDEAASALAESLTLTSLDVSVNRLSGQAARA 907
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
LAG ++L SLN+ I G AL LT LD I ++GA L N
Sbjct: 908 LAGNATLTSLNISHNHIGPDGAQALAESPSLTSLDARANGIGEAGARALEN 958
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 4/285 (1%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
G+ + + +AS + L S+D+S +D+++ L L SL N C +++ + L
Sbjct: 683 GIGEAGIAALASN-TVLRSLDISSNDLSEQSAAELARNQTLASLKANAC-GLTNSMAQQL 740
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
+ +L +L +N+I G+ A A +L L+L GL L+ L SL++
Sbjct: 741 ARIRSLRTLEVG-SNSIGDTGVLAIARNASLRTLNLSHNPITLQGLRPLELSRTLTSLDV 799
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
C D LS L SL++ + + +G L + L L+L G +
Sbjct: 800 SGIGC-GDRGALLLSKNRALTSLKLGFNGIGSAGAQGLAANRTLISLDLRGNTIDVDAAK 858
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
+L+ G L LN++ C+L D+ ++ +L L++ N ++ + L G L SLN
Sbjct: 859 ALANTGCLTSLNVSDCKLDDEAASALAESLTLTSLDVSVNRLSGQAARALAGNATLTSLN 918
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
+ IG +G L +L L+ +G +G R L T ++
Sbjct: 919 ISHNHIGPDGAQALAESPSLTSLDARANGIGEAGARALENNTRMQ 963
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 91/204 (44%), Gaps = 25/204 (12%)
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
E + +L GL LESLN+ IGD+G L +L+ L ++ +G++G R L+ L
Sbjct: 145 EAIAYLAGLP-LESLNVAGADIGDDGARLLAANPSLRALNAANGGIGAAGARALAESPVL 203
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL------- 379
S++L+ GI D R LA SL +L + +TD G AL LT LDL
Sbjct: 204 ASLDLTRNGIGDEGARALADSRSLTNLAVLNCLVTDVGARALAGNGTLTALDLGNLITET 263
Query: 380 -----------FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLV------SLNVS 422
IT GA L ++L SL I G D G+ L SLNV+
Sbjct: 264 GNELEQAGYDRTANEITARGAWALAQNRSLTSLSIQGNLCGDGGVQALAKNRTLTSLNVA 323
Query: 423 NSRITSAGLRHLKPLKNLRSLTLE 446
+ +T A L L SL++
Sbjct: 324 YTDMTPASATELARNPVLTSLSVR 347
>gi|419761284|ref|ZP_14287540.1| internalin-A [Thermosipho africanus H17ap60334]
gi|407513590|gb|EKF48487.1| internalin-A [Thermosipho africanus H17ap60334]
Length = 598
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 138/263 (52%), Gaps = 27/263 (10%)
Query: 149 VNLKGLMKLESLNIKWCNCITDSDMKPLSGL---TNLKSLQISCSKVTDSGIAYLKGLQK 205
+ ++ + +LE+L++ + S ++ LSGL NL+SL +S S+V D ++ L L K
Sbjct: 41 ITVQDMWELENLSLSF------SSVRDLSGLEYAVNLESLDLSNSEVPD--LSPLAKLPK 92
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
L L+L GC + L L +L L L+ ++SD +K L++L+L N I+
Sbjct: 93 LVKLDLSGCGIEDLS--LLPNLPNLISLRLSGNEISD--ISPLTKFSKLRMLDLSSNIIS 148
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
D + LK L NLE LNL I D + L+ L LK L+LS ++ S + L+ LTN
Sbjct: 149 D--ISPLKDLPNLEELNLSVNKISD--ITPLSNLTKLKRLDLSYNRI--SDISSLTNLTN 202
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
LE + LS+ ISD S LA L +L L+L +I+D ++ L LT L LDL I+
Sbjct: 203 LEELVLSYNEISDIS--PLANLPNLAGLDLSNNEISD--ISPLKDLTNLELLDLAENEIS 258
Query: 386 DSGAAYLRNFKNLRSLEICGGGL 408
D + L N +LR L +
Sbjct: 259 D--ISLLFNLTSLRELYVYPKDF 279
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 112/246 (45%), Gaps = 32/246 (13%)
Query: 75 IHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLV 134
I ++D L++L +F GLE+ NL SL + + A L LV
Sbjct: 41 ITVQDMWELENLSLSFSSVRDLSGLEYA---VNLESLDLSNSEV---PDLSPLAKLPKLV 94
Query: 135 KLDLERC----------------TRIHGGLV-NLKGLMKLESLNIKWCNCITDSDMKPLS 177
KLDL C R+ G + ++ L K L + + SD+ PL
Sbjct: 95 KLDLSGCGIEDLSLLPNLPNLISLRLSGNEISDISPLTKFSKLRMLDLSSNIISDISPLK 154
Query: 178 GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
L NL+ L +S +K++D I L L KL L+L ++ SL+ L +L L L+
Sbjct: 155 DLPNLEELNLSVNKISD--ITPLSNLTKLKRLDLSYNRISDIS--SLTNLTNLEELVLSY 210
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV-NL 296
++SD + + +L L+L NEI+D + LK LTNLE L+L I D L+ NL
Sbjct: 211 NEISD--ISPLANLPNLAGLDLSNNEISD--ISPLKDLTNLELLDLAENEISDISLLFNL 266
Query: 297 TGLCNL 302
T L L
Sbjct: 267 TSLREL 272
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 135/294 (45%), Gaps = 36/294 (12%)
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD-S 195
D++ T ++ NL+ ++ E+L I+ IT DM L++L +S S V D S
Sbjct: 328 DIDEETVVNFNDSNLEEAVR-EALKIEEDEDITVQDM------WELENLSLSFSSVRDLS 380
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 255
G+ Y L+ L L N E L L+ L L L+L+ C + D + +L
Sbjct: 381 GLEYAVNLESLDLSNSE-----VPDLSPLAKLPKLVKLDLSGCGIED--LSLLPNLPNLI 433
Query: 256 VLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSS 315
L L NEI+D + L + L L+L S I D + L L L+ L+L +V S
Sbjct: 434 SLRLSGNEISD--ISPLTKFSKLRMLDLSSNIISD--ISPLAKLTKLRFLDLYANEV--S 487
Query: 316 GLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLT 375
+ L+ LT L ++ S ++D S L L+ L+ L L +I D ++ L++LT L
Sbjct: 488 DVSPLAKLTKLRVLDFSQNKVNDIS--PLVKLTKLRVLELQYNKIND--ISPLSNLTNLI 543
Query: 376 HLDLFGARITD----------SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSL 419
LDL G +I+D G + R + R + G +T + + L+ L
Sbjct: 544 GLDLTGNKISDISPLFSLSGLKGLYFSRPHSDTR-FKFFGSLVTKSSMKNLIKL 596
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 163/397 (41%), Gaps = 98/397 (24%)
Query: 138 LERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD-SG 196
L+ + I + LK L LE LN+ N I SD+ PLS LT LK L +S ++++D S
Sbjct: 140 LDLSSNIISDISPLKDLPNLEELNLS-VNKI--SDITPLSNLTKLKRLDLSYNRISDISS 196
Query: 197 IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 256
+ L L++L L E ++ L+ L +L L+L+ ++SD + +L++
Sbjct: 197 LTNLTNLEELVLSYNEISDISP-----LANLPNLAGLDLSNNEISD--ISPLKDLTNLEL 249
Query: 257 LNLGFNEITD-----------ECLVHLKGL-------------------------TNLES 280
L+L NEI+D E V+ K E
Sbjct: 250 LDLAENEISDISLLFNLTSLRELYVYPKDFKMKMIMFIEKYEDVDEDIDYEDIDEDTFED 309
Query: 281 LNLDS------------CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
++LD+ I +E +VN NL+ ++ + + LE+
Sbjct: 310 IDLDNDEYIDVDIDEYIEDIDEETVVNFND-SNLEEAVREALKIEEDEDITVQDMWELEN 368
Query: 329 INLSFTGISDGSLRKLAGLS---SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
++LSF+ S+R L+GL +L+SL+L ++ D L+ L L L LDL G I
Sbjct: 369 LSLSFS-----SVRDLSGLEYAVNLESLDLSNSEVPD--LSPLAKLPKLVKLDLSGCGIE 421
Query: 386 D--------------------SGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNV 421
D S + L F LR L++ ++D A LT L L++
Sbjct: 422 DLSLLPNLPNLISLRLSGNEISDISPLTKFSKLRMLDLSSNIISDISPLAKLTKLRFLDL 481
Query: 422 SNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
+ ++ L L LR L KV NDI L
Sbjct: 482 YANEVSDVS--PLAKLTKLRVLDFSQNKV--NDISPL 514
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 22/227 (9%)
Query: 75 IHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLV 134
I ++D L++L +F GLE+ NL SL + + A L LV
Sbjct: 358 ITVQDMWELENLSLSFSSVRDLSGLEYA---VNLESLDLSNSEV---PDLSPLAKLPKLV 411
Query: 135 KLDLERCTRIHGGLVNLKGLMKLESLNIKWC-NCITDSDMKPLSGLTNLKSLQISCSKVT 193
KLDL C G ++++ N I SD+ PL+ + L+ L +S + ++
Sbjct: 412 KLDLSGC----GIEDLSLLPNLPNLISLRLSGNEI--SDISPLTKFSKLRMLDLSSNIIS 465
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGS 253
D I+ L L KL L+L V+ L+ L L L+ ++ +++D K+
Sbjct: 466 D--ISPLAKLTKLRFLDLYANEVSDVS--PLAKLTKLRVLDFSQNKVND--ISPLVKLTK 519
Query: 254 LKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD-EGLVNLTGL 299
L+VL L +N+I D + L LTNL L+L I D L +L+GL
Sbjct: 520 LRVLELQYNKIND--ISPLSNLTNLIGLDLTGNKISDISPLFSLSGL 564
>gi|167861934|gb|ACA05666.1| InlA [Listeria monocytogenes]
gi|194326141|emb|CAQ77229.1| internalin A [Listeria monocytogenes]
Length = 538
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQL--SFGNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|148909462|gb|ABR17829.1| unknown [Picea sitchensis]
Length = 455
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 144/324 (44%), Gaps = 48/324 (14%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
+TD + L LT L L + SK+++ G LK KL LNL VT L AL
Sbjct: 20 VTDLVVSSLQALTQLHQLDMWGSKISNEGAILLKAFPKLNCLNLAWTNVT-----RLPAL 74
Query: 228 GSLFYLNLNRCQLSD--DGCEK------------FSKIGSLKVL------NLGFNEITDE 267
SL LN+++C + DG E+ S I + +VL NL F +++
Sbjct: 75 VSLTSLNMSKCTIESILDGLEEPEISLLTLHFSGASFIDAYRVLSCLHAQNLTFLDLSGS 134
Query: 268 CL---VHLKGLTNLESLNLDSCGIGDEGLVNLTGL-CNLKCLELSDTQVGSSGLRHLSG- 322
+ L G+ LESL+L G+ D + ++ + NLK L LS T+V S L L+G
Sbjct: 135 SIDNVSFLAGMNRLESLDLSCTGVIDSSMNSVADIGANLKHLNLSTTRVTSDALAILAGN 194
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI------------TDTGLAALTS 370
+ LE I+LS T + D +L L +S+L++++L I LA+L
Sbjct: 195 VPKLEFISLSHTMVDDNALAYLGLISALRNISLSFTNIKGFIHVGESESNPQFSLASLRK 254
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNS 424
L L LDL I+D L K L L + L+D + L L L++ +
Sbjct: 255 LEHLEILDLENTHISDLACQPLIFLKELYHLSLRSDFLSDISLHTVSSLPKLKYLSIQGA 314
Query: 425 RITSAGLRHLKPLKNLRSLTLESC 448
+T GL P L+ L L C
Sbjct: 315 VVTKTGLCSFVPPPLLQVLDLSDC 338
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 155/339 (45%), Gaps = 27/339 (7%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+SL S+DL G VTD + L+ + L LD + +IS+ G L+ L L+
Sbjct: 8 TSLTSLDLGGLPVTDLVVSSLQALTQLHQLDM-WGSKISNEGAILLKAFPKLNCLNLAWT 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCT--RIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N + L++L L++ +CT I GL + + L +L+ + I +
Sbjct: 67 N------VTRLPALVSLTSLNMSKCTIESILDGLEEPE--ISLLTLHFSGASFIDAYRVL 118
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS-LFYL 233
NL L +S S + + +++L G+ +L L+L V + ++S++ +G+ L +L
Sbjct: 119 SCLHAQNLTFLDLSGSSIDN--VSFLAGMNRLESLDLSCTGVIDSSMNSVADIGANLKHL 176
Query: 234 NLNRCQLSDDGCEKFS-KIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI---- 288
NL+ +++ D + + L+ ++L + D L +L ++ L +++L I
Sbjct: 177 NLSTTRVTSDALAILAGNVPKLEFISLSHTMVDDNALAYLGLISALRNISLSFTNIKGFI 236
Query: 289 --------GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
L +L L +L+ L+L +T + + L L L ++L +SD S
Sbjct: 237 HVGESESNPQFSLASLRKLEHLEILDLENTHISDLACQPLIFLKELYHLSLRSDFLSDIS 296
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
L ++ L LK L++ +T TGL + L LDL
Sbjct: 297 LHTVSSLPKLKYLSIQGAVVTKTGLCSFVPPPLLQVLDL 335
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRS 400
+ +L+ L+SL SL+L +TD +++L +LT L LD++G++I++ GA L+ F L
Sbjct: 1 MARLSVLTSLTSLDLGGLPVTDLVVSSLQALTQLHQLDMWGSKISNEGAILLKAFPKLNC 60
Query: 401 LEICGGGLTD-AGLTGLVSLNVSNSRITS 428
L + +T L L SLN+S I S
Sbjct: 61 LNLAWTNVTRLPALVSLTSLNMSKCTIES 89
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 25/198 (12%)
Query: 247 KFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE 306
+ S + SL L+LG +TD + L+ LT L L++ I +EG + L L CL
Sbjct: 3 RLSVLTSLTSLDLGGLPVTDLVVSSLQALTQLHQLDMWGSKISNEGAILLKAFPKLNCLN 62
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS----SLKSLNLDARQITD 362
L+ T V L L +L S+N+S I L GL SL +L+ D
Sbjct: 63 LAWTNV-----TRLPALVSLTSLNMSKCTIES----ILDGLEEPEISLLTLHFSGASFID 113
Query: 363 TGLAALTSLTG--LTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL------- 413
L+ L LT LDL G+ I + ++L L SL++ G+ D+ +
Sbjct: 114 -AYRVLSCLHAQNLTFLDLSGSSIDN--VSFLAGMNRLESLDLSCTGVIDSSMNSVADIG 170
Query: 414 TGLVSLNVSNSRITSAGL 431
L LN+S +R+TS L
Sbjct: 171 ANLKHLNLSTTRVTSDAL 188
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 128/310 (41%), Gaps = 56/310 (18%)
Query: 46 DKWMDVIASQGSSLLS-------VDLSGSDVTDSGLIHLKDCSNLQSLDFNFC-IQISDG 97
D W I+++G+ LL ++L+ ++VT L +L SL+ + C I+
Sbjct: 38 DMWGSKISNEGAILLKAFPKLNCLNLAWTNVT-----RLPALVSLTSLNMSKCTIESILD 92
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
GLE +L +L F + I A + + NL LDL + + L G+ +L
Sbjct: 93 GLEEPE--ISLLTLHFSGASFIDAYRVLSCLHAQNLTFLDLSGSSI--DNVSFLAGMNRL 148
Query: 158 ESLNIKWCNCITDSDMKPLSGL-TNLKSLQISCSKVTDSGIAYLKG-LQKLTLLNLEGCP 215
ESL++ C + DS M ++ + NLK L +S ++VT +A L G + KL ++L
Sbjct: 149 ESLDLS-CTGVIDSSMNSVADIGANLKHLNLSTTRVTSDALAILAGNVPKLEFISLSHTM 207
Query: 216 V------------------------------------TAACLDSLSALGSLFYLNLNRCQ 239
V L SL L L L+L
Sbjct: 208 VDDNALAYLGLISALRNISLSFTNIKGFIHVGESESNPQFSLASLRKLEHLEILDLENTH 267
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
+SD C+ + L L+L + ++D L + L L+ L++ + GL +
Sbjct: 268 ISDLACQPLIFLKELYHLSLRSDFLSDISLHTVSSLPKLKYLSIQGAVVTKTGLCSFVPP 327
Query: 300 CNLKCLELSD 309
L+ L+LSD
Sbjct: 328 PLLQVLDLSD 337
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
GV D M+ +A G++L ++LS + VT L L N+ L+F I +S ++
Sbjct: 157 GVIDSSMNSVADIGANLKHLNLSTTRVTSDALAIL--AGNVPKLEF---ISLSHTMVDD- 210
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
L+ L +S RN +++ +K F + E + L +L+ L LE L++
Sbjct: 211 NALAYLGLISALRNISLSFTNIKGFIHVG-------ESESNPQFSLASLRKLEHLEILDL 263
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
+ + I+D +PL L L L + ++D + + L KL L+++G VT L
Sbjct: 264 ENTH-ISDLACQPLIFLKELYHLSLRSDFLSDISLHTVSSLPKLKYLSIQGAVVTKTGLC 322
Query: 223 SLSALGSLFYLNLNRCQ-LSDDGCEKFSK 250
S L L+L+ C L+ +G +F K
Sbjct: 323 SFVPPPLLQVLDLSDCWLLTMEGILEFWK 351
>gi|158429248|pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 67 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 120
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 121 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQL--SFGNQVTD--LKPL 172
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 173 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 225
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 226 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 279
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 280 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 337
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 338 ANNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 395
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 396 NVSIPNTVKNVTGALIAPATISDGG 420
>gi|343416403|emb|CCD20380.1| leucine-rich repeat protein [Trypanosoma vivax Y486]
Length = 1256
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 192/404 (47%), Gaps = 26/404 (6%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISD-GGLEHLRGLSNLTSLSFRR 115
++L + L+ +V D+ L L L+ L N C +I+D L +R L NL
Sbjct: 584 TTLQKLCLANVNVDDAFLRDLTCHERLRELSLNSCTRITDVSPLARMRSLENLDL----- 638
Query: 116 NNAIT--AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
N T +G+ GL L +L L + + L +L +L L++ C IT D+
Sbjct: 639 -NDCTGIVRGLHVLCGLTTLQELCLRQLSVDDAFLRDLTCHERLRRLSLNSCTRIT--DV 695
Query: 174 KPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
PL+ + +L+ L ++ C+ + G+ L GL L L L V A + L+ L
Sbjct: 696 SPLARMRSLEILDLNGCTGIV-RGLHVLCGLTTLQELCLANVNVDDAFVRDLTCHERLRR 754
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L+LN C D +++ SL++LNL L L GLT L+ L L + D
Sbjct: 755 LSLNSCTRITD-VSPLARMRSLEMLNLNDCTGIVRGLHELCGLTTLQELYLPKVYVDDAF 813
Query: 293 LVNLTGLCNLKCLEL-SDTQVGSSGLRHLSGLTNLESINLS-FTGISDGSLRKLAGLSSL 350
L +LT L+ L L S T++ + + L+ + +LE +NL+ TGI G L +L GL++L
Sbjct: 814 LRDLTCHERLRRLSLNSCTRI--TDVSPLARMRSLEMLNLNGCTGIVRG-LHELCGLTTL 870
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFG-ARITD-SGAAYLRNFKNLRSLEICGG-- 406
+ L L + D L LT L L L RITD S A +R+ + L L C G
Sbjct: 871 QELYLRQMSVDDAFLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLEML-DLNDCTGIV 929
Query: 407 -GLTD-AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
GL + GLT L L ++N + A LR L + LR L+L SC
Sbjct: 930 RGLHELCGLTTLQELCLANVNVDDAFLRDLTCHERLRELSLNSC 973
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 193/439 (43%), Gaps = 36/439 (8%)
Query: 32 ALQDLCLGQYPGVNDKWM-DVIASQGSSLLSVDLSGSDVTD-SGLIHLKDCSNLQSLDFN 89
LQ+LCL Q V+D ++ D+ + LS++ S + +TD S L ++ +L+ LD N
Sbjct: 656 TLQELCLRQL-SVDDAFLRDLTCHERLRRLSLN-SCTRITDVSPLARMR---SLEILDLN 710
Query: 90 FCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLV 149
C I G L L GL+ L L N A ++ L +L L CTRI +
Sbjct: 711 GCTGIVRG-LHVLCGLTTLQELCLANVNVDDA-FVRDLTCHERLRRLSLNSCTRI-TDVS 767
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
L + LE LN+ C I + L GLT L+ L + V D+ + L ++L L
Sbjct: 768 PLARMRSLEMLNLNDCTGIVRG-LHELCGLTTLQELYLPKVYVDDAFLRDLTCHERLRRL 826
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
+L C + L+ + SL LNLN C G + + +L+ L L + D L
Sbjct: 827 SLNSCTRITD-VSPLARMRSLEMLNLNGCTGIVRGLHELCGLTTLQELYLRQMSVDDAFL 885
Query: 270 VHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
L L L+L+SC I D + L + +L+ L+L+D GL L GLT L+
Sbjct: 886 RDLTCHERLRRLSLNSCTRITD--VSPLARMRSLEMLDLNDCTGIVRGLHELCGLTTLQE 943
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGARITDS 387
+ L+ + D LR L L+ L+L++ +ITD ++ L + L LDL G
Sbjct: 944 LCLANVNVDDAFLRDLTCHERLRELSLNSCTRITD--VSPLARMRSLEKLDLNGCTGIVR 1001
Query: 388 GAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 447
G L GLT L L + + A LR L + LR L+L S
Sbjct: 1002 GLHVL------------------CGLTTLQELYLRQMSVDDALLRDLTCHERLRRLSLNS 1043
Query: 448 CKVTANDIKRLQSRDLPNL 466
C + + R L N+
Sbjct: 1044 CTRITDVSPLARMRSLENM 1062
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 217/492 (44%), Gaps = 69/492 (14%)
Query: 32 ALQDLCLGQYPGVNDKWM-DVIASQGSSLLSVDLSGSDVTD-SGLIHLKDCSNLQSLDFN 89
LQ+LCL V+D ++ D+ + LS++ S + +TD S L ++ +L+ L+ N
Sbjct: 727 TLQELCLANV-NVDDAFVRDLTCHERLRRLSLN-SCTRITDVSPLARMR---SLEMLNLN 781
Query: 90 FCIQISDGGLEHLRGLSNLTSL-------------------SFRR---NNAITAQGMKAF 127
C I G L L GL+ L L RR N+ +
Sbjct: 782 DCTGIVRG-LHELCGLTTLQELYLPKVYVDDAFLRDLTCHERLRRLSLNSCTRITDVSPL 840
Query: 128 AGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
A + +L L+L CT I GL L GL L+ L ++ + + D+ ++ L+ L+ L +
Sbjct: 841 ARMRSLEMLNLNGCTGIVRGLHELCGLTTLQELYLRQMS-VDDAFLRDLTCHERLRRLSL 899
Query: 188 -SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCE 246
SC+++TD ++ L ++ L +L+L C L L L +L L L + D
Sbjct: 900 NSCTRITD--VSPLARMRSLEMLDLNDCTGIVRGLHELCGLTTLQELCLANVNVDDAFLR 957
Query: 247 KFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
+ L+ L+L ITD + L + +LE L+L+ C GL L GL L+ L
Sbjct: 958 DLTCHERLRELSLNSCTRITD--VSPLARMRSLEKLDLNGCTGIVRGLHVLCGLTTLQEL 1015
Query: 306 ELSDTQVGSSGLRHLSGLTNLESINL-SFTGISDGS----------------------LR 342
L V + LR L+ L ++L S T I+D S L
Sbjct: 1016 YLRQMSVDDALLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLENMDLNGCTGIVRGLH 1075
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG-ARITD-SGAAYLRNFKNLRS 400
L GL++L+ L L + D L LT L L L RITD S A +R+ + L
Sbjct: 1076 VLCGLTTLQELYLRQMSVDDAFLRDLTCHERLRKLSLNSCTRITDVSPLARMRSLEML-D 1134
Query: 401 LEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC-KVT-AND 454
L C G + GLT L L + + A LR L + LR L+L SC ++T +
Sbjct: 1135 LNGCTGIVRGLHVLCGLTTLQELYLRQMCVDDAFLRDLTCHERLRRLSLNSCTRITDVSP 1194
Query: 455 IKRLQSRDLPNL 466
+ R++S ++ +L
Sbjct: 1195 LARMRSLEMLDL 1206
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 180/431 (41%), Gaps = 87/431 (20%)
Query: 92 IQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL 151
+ + D L L L LS N+ + A + +L LDL CT I GL L
Sbjct: 381 VSVDDAFLRDLTCHERLRELSL--NSCTRITDVSPLARMRSLEMLDLNGCTGIVRGLHEL 438
Query: 152 KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLN 210
GL L+ L ++ + + D+ ++ L+ L+ L + SC+++TD ++ L ++ L +L+
Sbjct: 439 CGLTTLQELYLRQMS-VDDALLRDLTCHERLRELSLNSCTRITD--VSPLARMRSLEMLD 495
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL-GFNEITDECL 269
L GC L L L +L L L + + D + L+ L+L ITD +
Sbjct: 496 LNGCTGIVRGLHELCGLTTLQELYLRQMSVDDALLRDLTCHERLRELSLNSCTRITD--V 553
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
L + +LE LNL+ C G+V GL L GLT L+ +
Sbjct: 554 SPLARMRSLEILNLNDCT----GIVR--------------------GLHVLCGLTTLQKL 589
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITD------------------TGLA-ALT 369
L+ + D LR L L+ L+L++ +ITD TG+ L
Sbjct: 590 CLANVNVDDAFLRDLTCHERLRELSLNSCTRITDVSPLARMRSLENLDLNDCTGIVRGLH 649
Query: 370 SLTGLTHLDLFGARITDSGAAYLRN-----------------------FKNLRSLEI--- 403
L GLT L R A+LR+ +RSLEI
Sbjct: 650 VLCGLTTLQELCLRQLSVDDAFLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLEILDL 709
Query: 404 --CGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC-KVT-ANDI 455
C G + GLT L L ++N + A +R L + LR L+L SC ++T + +
Sbjct: 710 NGCTGIVRGLHVLCGLTTLQELCLANVNVDDAFVRDLTCHERLRRLSLNSCTRITDVSPL 769
Query: 456 KRLQSRDLPNL 466
R++S ++ NL
Sbjct: 770 ARMRSLEMLNL 780
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 7/183 (3%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
++ SL ++DL+G GL L + LQ L + + D L L L LS
Sbjct: 1054 ARMRSLENMDLNGCTGIVRGLHVLCGLTTLQELYLRQ-MSVDDAFLRDLTCHERLRKLSL 1112
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
N+ + A + +L LDL CT I GL L GL L+ L ++ C+ D+ +
Sbjct: 1113 --NSCTRITDVSPLARMRSLEMLDLNGCTGIVRGLHVLCGLTTLQELYLRQ-MCVDDAFL 1169
Query: 174 KPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
+ L+ L+ L + SC+++TD ++ L ++ L +L+L GC L L L +L
Sbjct: 1170 RDLTCHERLRRLSLNSCTRITD--VSPLARMRSLEMLDLNGCTGIVRGLHVLCGLTTLQE 1227
Query: 233 LNL 235
L L
Sbjct: 1228 LYL 1230
>gi|168704644|ref|ZP_02736921.1| hypothetical protein GobsU_34225 [Gemmata obscuriglobus UQM 2246]
Length = 952
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 170/345 (49%), Gaps = 32/345 (9%)
Query: 46 DKWMDVIASQ---GSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
DK ++++ +Q G SL + LS +D+ D L L + L+ LD + C +SD L
Sbjct: 619 DKRLEMLWTQIRRGLSLRRLVLSKTDIAD--LSPLAPLTALEELDLSGCAGVSD-----L 671
Query: 103 RGLSNLTSLSFRR-NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLN 161
L+NLT+L F + + A L L LDL C + L L L LE LN
Sbjct: 672 SPLANLTALRFLDLSGCAGGADLSPLANLTALRFLDLSGCAGV-SDLAPLANLTALEGLN 730
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAA 219
++ C + SD+ PL+ LT L+ L +S C+ D S +A L GL+ LNL GC +
Sbjct: 731 LRGCAGV--SDLSPLANLTGLRHLNLSGCAGWADLSPLANLTGLRH---LNLNGC-TGVS 784
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNL 278
L L+ L +L L+L+ C D + + +L+ L+L G ++D L L T L
Sbjct: 785 DLSPLAPLTALEELDLSGCAGVSD-LSPLANLTALEGLDLSGCAGVSD--LSPLAPHTAL 841
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGIS 337
L+L C G L L L+ L+LS G S L L+ LT LE ++LS G+S
Sbjct: 842 RFLDLSGCA-GVSCLSPLAPHTALRFLDLSGC-AGVSDLSPLANLTALEDLDLSGCAGVS 899
Query: 338 DGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFG 381
D L LA L++L+ L+L + D L+ L LT L LDL G
Sbjct: 900 D--LSPLANLTALEGLDLSGCTGVLD--LSPLAPLTALQFLDLGG 940
>gi|112959464|gb|ABI27259.1| internalin A [Listeria monocytogenes]
Length = 698
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 177/380 (46%), Gaps = 60/380 (15%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
++ S + +TD + LKD + L + N QI+D + L L+NLT L+ NN IT
Sbjct: 1 INFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-NNQIT- 53
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
+ L NL +L+L T + L GL L+ L+ N +TD +KPL+ LT
Sbjct: 54 -DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPLANLTT 106
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYLNLNRC 238
L+ L IS +KV+D + L KLT NLE T + ++ LG +L L+LN
Sbjct: 107 LERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDELSLNGN 159
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
QL D G + + +L L+L N+I++ L L GLT L L L + I + + L G
Sbjct: 160 QLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--ISPLAG 213
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK----------- 343
L L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 214 LTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKV 271
Query: 344 -----LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN---- 394
LA L+++ L+ QI+D L L +LT +T L L T+ Y N
Sbjct: 272 SDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKVNVSIP 329
Query: 395 --FKNLRSLEICGGGLTDAG 412
KN+ I ++D G
Sbjct: 330 NTVKNVTGALIAPATISDGG 349
>gi|116621127|ref|YP_823283.1| hypothetical protein Acid_2008 [Candidatus Solibacter usitatus
Ellin6076]
gi|116224289|gb|ABJ82998.1| hypothetical protein Acid_2008 [Candidatus Solibacter usitatus
Ellin6076]
Length = 248
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 111/214 (51%), Gaps = 8/214 (3%)
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV 216
LE L I W IT+ ++P+S +T L + + V D + +L+ L++L LNL V
Sbjct: 28 LEELVI-WGGAITNDRLEPVSRMTWLTGVGLGEVPVDDGVLVHLQPLRELECLNLAYTGV 86
Query: 217 TAACLDSLSALGS-LFYLNLNRCQLSDDGCEK-FSKIGSLKVLNLGFNEITDECLVHLKG 274
T D LG+ L + L C+ + D C + ++ +L+ + + +TD+ L +
Sbjct: 87 TG---DFTRLLGTPLRDVRLEGCRRTGDACARSLARFPTLRQVEMHMTGLTDDGLAAMAA 143
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
L LE L L I D G+ + G NL+ L++ + G+R L+GL L+ + L+ +
Sbjct: 144 LP-LEVLWLGP-RITDRGMETIGGFANLRHLDICTHLITDEGVRALAGLQQLQVLWLTRS 201
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
+SD S+ L+ + L+ LN++ +IT GLA L
Sbjct: 202 RVSDASIEVLSQFTGLRELNVNYTEITAQGLARL 235
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 106/230 (46%), Gaps = 15/230 (6%)
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
Q+ D K L+ L + IT++ L + +T L + L + D LV+L
Sbjct: 13 QVDDALWRKLESRRDLEELVIWGGAITNDRLEPVSRMTWLTGVGLGEVPVDDGVLVHLQP 72
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS---FTGISDGSLRKLAGLSSLKSLNL 355
L L+CL L+ T V R L T L + L TG D R LA +L+ + +
Sbjct: 73 LRELECLNLAYTGVTGDFTRLLG--TPLRDVRLEGCRRTG--DACARSLARFPTLRQVEM 128
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG--- 412
+TD GLAA+ +L + G RITD G + F NLR L+IC +TD G
Sbjct: 129 HMTGLTDDGLAAMAALP--LEVLWLGPRITDRGMETIGGFANLRHLDICTHLITDEGVRA 186
Query: 413 LTGLVSLNV---SNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
L GL L V + SR++ A + L LR L + ++TA + RL+
Sbjct: 187 LAGLQQLQVLWLTRSRVSDASIEVLSQFTGLRELNVNYTEITAQGLARLK 236
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 100/238 (42%), Gaps = 50/238 (21%)
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI----------- 288
+++D E S++ L + LG + D LVHL+ L LE LNL G+
Sbjct: 38 ITNDRLEPVSRMTWLTGVGLGEVPVDDGVLVHLQPLRELECLNLAYTGVTGDFTRLLGTP 97
Query: 289 ------------GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
GD +L L+ +E+ T + GL ++ L LE + L I
Sbjct: 98 LRDVRLEGCRRTGDACARSLARFPTLRQVEMHMTGLTDDGLAAMAALP-LEVLWLG-PRI 155
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
+D + + G ++L+ L++ ITD G+ AL L L L L +R++D+ L F
Sbjct: 156 TDRGMETIGGFANLRHLDICTHLITDEGVRALAGLQQLQVLWLTRSRVSDASIEVLSQF- 214
Query: 397 NLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAND 454
TGL LNV+ + IT+ GL LK L L C++ D
Sbjct: 215 -----------------TGLRELNVNYTEITAQGLARLK-------LALPECRLVEPD 248
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRI--HGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
IT +GM+ G NL LD+ CT + G+ L GL +L+ L + + ++D+ ++ L
Sbjct: 155 ITDRGMETIGGFANLRHLDI--CTHLITDEGVRALAGLQQLQVLWLT-RSRVSDASIEVL 211
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLK 201
S T L+ L ++ +++T G+A LK
Sbjct: 212 SQFTGLRELNVNYTEITAQGLARLK 236
>gi|390362171|ref|XP_003730087.1| PREDICTED: F-box/LRR-repeat protein 14-like [Strongylocentrotus
purpuratus]
Length = 478
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 152/298 (51%), Gaps = 24/298 (8%)
Query: 82 NLQSLDFNFCIQISDGGLEHL--RGLSNLTSLSFRRNNAITAQGM-KAFAGLINLVKLDL 138
N+QSL+ + C ++D GL H + + LT L+ IT + + L L LDL
Sbjct: 175 NIQSLNLSGCYNLTDVGLSHAFSKEIPTLTVLNLSLCKQITDTSLWRIEQYLKQLEVLDL 234
Query: 139 ERCTRI--HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT-----NLKSLQI---- 187
C+ I G LV +GL KL+ LN++ C I+D + L+G++ + L++
Sbjct: 235 AGCSNITNTGLLVIARGLHKLKGLNLRSCRHISDVGIGYLAGVSVEAARGTRDLELLVLQ 294
Query: 188 SCSKVTDSGIAYL-KGLQKLTLLNLEG-CPVTAACLDSLSALGSLFYLNLNRC-QLSDDG 244
C K++D+ + + KGL KL LNL C +T + SLS + SL LNL C +SD G
Sbjct: 295 DCQKLSDTALMSIAKGLHKLRSLNLSFCCGITDTGMISLSRMQSLRELNLRSCDNISDIG 354
Query: 245 CEKFSKI-GSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGLVNLT-GLC 300
++ G L+ F ++I D L H+ +G+ NL++++L SC I DEG+ L L
Sbjct: 355 LAHLAEYGGHFATLDASFCDKIGDAALSHISQGMPNLKNVSLSSCHITDEGVGRLVRSLH 414
Query: 301 NLKCLELSD-TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNL 355
N+ L + +V GL ++ L L+ I+L T I+ L ++ L L LNL
Sbjct: 415 NMTTLNIGQCVRVTDKGLALIAEHLKELKCIDLYGCTMITTVGLERIMQLPCLTVLNL 472
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 153/295 (51%), Gaps = 26/295 (8%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPL--SGLTNLKSLQIS-CSKVTDSGIAYLKG-LQKL 206
++G+ ++SLN+ C +TD + + L L +S C ++TD+ + ++ L++L
Sbjct: 170 MQGMPNIQSLNLSGCYNLTDVGLSHAFSKEIPTLTVLNLSLCKQITDTSLWRIEQYLKQL 229
Query: 207 TLLNLEGCP--VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIG--------SLK 255
+L+L GC L L L LNL C+ +SD G + + L+
Sbjct: 230 EVLDLAGCSNITNTGLLVIARGLHKLKGLNLRSCRHISDVGIGYLAGVSVEAARGTRDLE 289
Query: 256 VLNLG-FNEITDECLVHL-KGLTNLESLNLD-SCGIGDEGLVNLTGLCNLKCLEL-SDTQ 311
+L L +++D L+ + KGL L SLNL CGI D G+++L+ + +L+ L L S
Sbjct: 290 LLVLQDCQKLSDTALMSIAKGLHKLRSLNLSFCCGITDTGMISLSRMQSLRELNLRSCDN 349
Query: 312 VGSSGLRHLSGL-TNLESINLSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAAL 368
+ GL HL+ + +++ SF I D +L ++ G+ +LK+++L + ITD G+ L
Sbjct: 350 ISDIGLAHLAEYGGHFATLDASFCDKIGDAALSHISQGMPNLKNVSLSSCHITDEGVGRL 409
Query: 369 T-SLTGLTHLDLFG-ARITDSGAAYL-RNFKNLRSLEICGGGL-TDAGLTGLVSL 419
SL +T L++ R+TD G A + + K L+ +++ G + T GL ++ L
Sbjct: 410 VRSLHNMTTLNIGQCVRVTDKGLALIAEHLKELKCIDLYGCTMITTVGLERIMQL 464
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 139/281 (49%), Gaps = 51/281 (18%)
Query: 62 VDLSG-SDVTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAI 119
+DL+G S++T++GL+ + + L+ L+ C ISD G+ +L G+S
Sbjct: 232 LDLAGCSNITNTGLLVIARGLHKLKGLNLRSCRHISDVGIGYLAGVS------------- 278
Query: 120 TAQGMKAFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKPLS 177
++A G +L L L+ C ++ L+++ KGL KL SLN+ +C ITD+ M LS
Sbjct: 279 ----VEAARGTRDLELLVLQDCQKLSDTALMSIAKGLHKLRSLNLSFCCGITDTGMISLS 334
Query: 178 GLTNLKSLQI-SCSKVTDSGIAYLKGL-QKLTLLNLEGC-PVTAACLDSLS-ALGSLFYL 233
+ +L+ L + SC ++D G+A+L L+ C + A L +S + +L +
Sbjct: 335 RMQSLRELNLRSCDNISDIGLAHLAEYGGHFATLDASFCDKIGDAALSHISQGMPNLKNV 394
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEG 292
+L+ C ++D+G +G L ++ L N+ +LN+ C + D+G
Sbjct: 395 SLSSCHITDEG------VGRL-----------------VRSLHNMTTLNIGQCVRVTDKG 431
Query: 293 LVNLT-GLCNLKCLELSD-TQVGSSGLRHLSGLTNLESINL 331
L + L LKC++L T + + GL + L L +NL
Sbjct: 432 LALIAEHLKELKCIDLYGCTMITTVGLERIMQLPCLTVLNL 472
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 134/318 (42%), Gaps = 92/318 (28%)
Query: 176 LSGLTNLKSLQIS-CSKVTDSGI--AYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
+ G+ N++SL +S C +TD G+ A+ K + LT+LNL C
Sbjct: 170 MQGMPNIQSLNLSGCYNLTDVGLSHAFSKEIPTLTVLNLSLCK----------------- 212
Query: 233 LNLNRCQLSDDGCEKFSK-IGSLKVLNL-GFNEITDE-CLVHLKGLTNLESLNLDSC-GI 288
Q++D + + + L+VL+L G + IT+ LV +GL L+ LNL SC I
Sbjct: 213 ------QITDTSLWRIEQYLKQLEVLDLAGCSNITNTGLLVIARGLHKLKGLNLRSCRHI 266
Query: 289 GDEGLVNLTG--------------LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
D G+ L G L C +LSDT + S GL L S+NLSF
Sbjct: 267 SDVGIGYLAGVSVEAARGTRDLELLVLQDCQKLSDTALMSIA----KGLHKLRSLNLSFC 322
Query: 335 -GISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
GI+D + L+ + SL+ LNL + I+D GLA L G H A D
Sbjct: 323 CGITDTGMISLSRMQSLRELNLRSCDNISDIGLAHLAEYGG--HFATLDASFCD------ 374
Query: 393 RNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHL-KPLKNLRSLTLESCKVT 451
+I A L H+ + + NL++++L SC +T
Sbjct: 375 --------------------------------KIGDAALSHISQGMPNLKNVSLSSCHIT 402
Query: 452 ANDIKRLQSRDLPNLVSF 469
+ RL R L N+ +
Sbjct: 403 DEGVGRL-VRSLHNMTTL 419
>gi|395538856|ref|XP_003771390.1| PREDICTED: F-box/LRR-repeat protein 14, partial [Sarcophilus
harrisii]
Length = 341
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 165/329 (50%), Gaps = 36/329 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + +
Sbjct: 9 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAVVQEIGSPRA 62
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL GC
Sbjct: 63 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRGC 120
Query: 215 PVTA-------ACLDSLSALG--SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A + +A G L L L CQ L+D + S+ + L++LNL F
Sbjct: 121 RHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLAGLRLLNLSFCG 180
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRH 319
I+D L+HL + +L SLNL SC I D G+++L G L L++S +VG L +
Sbjct: 181 GISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAY 240
Query: 320 LS-GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALTS-LTGLT 375
++ GL L S++ ISD + R + + L++LN+ +ITD GL + L+ LT
Sbjct: 241 IAQGLDGLNSLSRCPCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLT 300
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEI 403
+DL+G RIT G + L+ L +
Sbjct: 301 GIDLYGCTRITKRGLERITQLPCLKVLNL 329
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 165/315 (52%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + + +L+ IT + A + L
Sbjct: 27 IQGMANIESLNLSGCYNLTDNGLGHAVVQEIGSPRALNLSLCKQITDSSLGRIAQYLKGL 86
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 87 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRGCRHLSDVGIGHLAGMTRSAAEGCLGLE 146
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 147 QLTLQDCQKLTDLSLKHISRGLAGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 206
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L SL+ C I D+G+
Sbjct: 207 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLNSLSRCPCHISDDGINR 265
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 266 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYG--CTRITKRGLERITQLP 322
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+T++
Sbjct: 323 CLKVLNLGLWQMTES 337
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 156 LTDLSLKHISRGLAGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 215
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L SL+ C+ D + + + L++
Sbjct: 216 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLNSLSRCPCHISDDGINRMVRQMHGLRT 275
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 276 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 312
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++T+
Sbjct: 313 RGLERITQLPCLKVLNLGLWQMTE 336
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 92/202 (45%), Gaps = 49/202 (24%)
Query: 272 LKGLTNLESLNLDSC-GIGDEGL-------VNLTGLCNLK-CLELSDTQVGSSGLRHLSG 322
++G+ N+ESLNL C + D GL + NL C +++D+ +G ++L G
Sbjct: 27 IQGMANIESLNLSGCYNLTDNGLGHAVVQEIGSPRALNLSLCKQITDSSLGRIA-QYLKG 85
Query: 323 LTNLE---SINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLT------ 372
L LE N++ TG+ L GL LKSLNL R ++D G+ L +T
Sbjct: 86 LEVLELGGCSNITNTGL----LLIAWGLQRLKSLNLRGCRHLSDVGIGHLAGMTRSAAEG 141
Query: 373 --GLTHLDLFG-ARITDSGAAYL-RNFKNLR--SLEICGGGLTDAGLTGLVSLNVSNSRI 426
GL L L ++TD ++ R LR +L CGG I
Sbjct: 142 CLGLEQLTLQDCQKLTDLSLKHISRGLAGLRLLNLSFCGG-------------------I 182
Query: 427 TSAGLRHLKPLKNLRSLTLESC 448
+ AGL HL + +LRSL L SC
Sbjct: 183 SDAGLLHLSHMGSLRSLNLRSC 204
>gi|405757422|ref|YP_006686698.1| internalin A protein InlA, N-terminal part, partial [Listeria
monocytogenes SLCC2479]
gi|145687805|gb|ABP88875.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687811|gb|ABP88878.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687813|gb|ABP88879.1| truncated internalin A precursor [Listeria monocytogenes]
gi|167861890|gb|ACA05644.1| InlA [Listeria monocytogenes]
gi|167861942|gb|ACA05670.1| InlA [Listeria monocytogenes]
gi|167861986|gb|ACA05692.1| InlA [Listeria monocytogenes]
gi|194326143|emb|CAQ77230.1| internalin A [Listeria monocytogenes]
gi|298359794|gb|ADI77476.1| truncated internalin A [Listeria monocytogenes]
gi|298359982|gb|ADI77570.1| truncated internalin A [Listeria monocytogenes]
gi|298360074|gb|ADI77616.1| truncated internalin A [Listeria monocytogenes]
gi|298360136|gb|ADI77647.1| truncated internalin A [Listeria monocytogenes]
gi|298360184|gb|ADI77671.1| truncated internalin A [Listeria monocytogenes]
gi|298360286|gb|ADI77722.1| truncated internalin A [Listeria monocytogenes]
gi|298360300|gb|ADI77729.1| truncated internalin A [Listeria monocytogenes]
gi|298360306|gb|ADI77732.1| truncated internalin A [Listeria monocytogenes]
gi|298360344|gb|ADI77751.1| truncated internalin A [Listeria monocytogenes]
gi|298360352|gb|ADI77755.1| truncated internalin A [Listeria monocytogenes]
gi|298360358|gb|ADI77758.1| truncated internalin A [Listeria monocytogenes]
gi|298360602|gb|ADI77880.1| truncated internalin A [Listeria monocytogenes]
gi|298360636|gb|ADI77897.1| truncated internalin A [Listeria monocytogenes]
gi|371942098|gb|AEX60861.1| truncated internaline [Listeria monocytogenes]
gi|371942122|gb|AEX60873.1| truncated internaline [Listeria monocytogenes]
gi|404235304|emb|CBY56706.1| similar to internalin A protein InlA, N-terminal part [Listeria
monocytogenes SLCC2479]
Length = 576
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQL--SFGNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|85679240|gb|ABC72036.1| InlA [Listeria monocytogenes]
Length = 794
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 97 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 150
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 151 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 202
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +K++D + L KLT NLE T + ++ LG +L L
Sbjct: 203 ANLTTLERLDISSNKLSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 255
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 256 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 309
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 310 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 367
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 368 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKT 425
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 426 NVSIPNTVKNVTGALIAPATISDGG 450
>gi|298360020|gb|ADI77589.1| truncated internalin A [Listeria monocytogenes]
gi|298360528|gb|ADI77843.1| truncated internalin A [Listeria monocytogenes]
Length = 459
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNT--ISDISALSGLTSLQQL--SFGNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|371942144|gb|AEX60884.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNT--ISDISALSGLTSLQQL--SFGNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|219821255|gb|ACL37748.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|290994276|ref|XP_002679758.1| predicted protein [Naegleria gruberi]
gi|284093376|gb|EFC47014.1| predicted protein [Naegleria gruberi]
Length = 205
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 18/218 (8%)
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC 286
+ L LN++ + D+ + S++ L L++ N I DE +L + L SLN+
Sbjct: 1 MKQLISLNISGNEFGDEEAKLISEMKQLTSLDISGNRIGDEGAKYLSEMKQLISLNIGEN 60
Query: 287 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAG 346
IGDEG ++ L L + TQ+G + +S + L S+N+S I + ++
Sbjct: 61 EIGDEGAKLISETRQLASLNICFTQIGIEEAKLISEMRQLTSLNISDNRICVEGAKWISE 120
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG 406
+ L SL++ +I D G ++ + LT LD+ RI D GA ++ K
Sbjct: 121 MRQLTSLDISGNRIGDEGAKTISEMKQLTSLDISYNRIGDEGAKFISEMKQ--------- 171
Query: 407 GLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
L+SLN+ +RI G++++ +K L SLT
Sbjct: 172 ---------LISLNIRGNRIGDEGVKYISEMKQLTSLT 200
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%)
Query: 203 LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
+++L LN+ G +S + L L+++ ++ D+G + S++ L LN+G N
Sbjct: 1 MKQLISLNISGNEFGDEEAKLISEMKQLTSLDISGNRIGDEGAKYLSEMKQLISLNIGEN 60
Query: 263 EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG 322
EI DE + L SLN+ IG E ++ + L L +SD ++ G + +S
Sbjct: 61 EIGDEGAKLISETRQLASLNICFTQIGIEEAKLISEMRQLTSLNISDNRICVEGAKWISE 120
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
+ L S+++S I D + ++ + L SL++ +I D G ++ + L L++ G
Sbjct: 121 MRQLTSLDISGNRIGDEGAKTISEMKQLTSLDISYNRIGDEGAKFISEMKQLISLNIRGN 180
Query: 383 RITDSGAAYLRNFKNLRSLEICG 405
RI D G Y+ K L SL G
Sbjct: 181 RIGDEGVKYISEMKQLTSLTYKG 203
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+ L SL IS ++ D + +++LT L++ G + LS + L LN+
Sbjct: 1 MKQLISLNISGNEFGDEEAKLISEMKQLTSLDISGNRIGDEGAKYLSEMKQLISLNIGEN 60
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
++ D+G + S+ L LN+ F +I E + + L SLN+ I EG ++
Sbjct: 61 EIGDEGAKLISETRQLASLNICFTQIGIEEAKLISEMRQLTSLNISDNRICVEGAKWISE 120
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
+ L L++S ++G G + +S + L S+++S+ I D + ++ + L SLN+
Sbjct: 121 MRQLTSLDISGNRIGDEGAKTISEMKQLTSLDISYNRIGDEGAKFISEMKQLISLNIRGN 180
Query: 359 QITDTGLAALTSLTGLTHLDLFG 381
+I D G+ ++ + LT L G
Sbjct: 181 RIGDEGVKYISEMKQLTSLTYKG 203
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L+S+++SG++ D + + L SLD + +I D G ++L + L SL+ N
Sbjct: 4 LISLNISGNEFGDEEAKLISEMKQLTSLDISGN-RIGDEGAKYLSEMKQLISLNIGE-NE 61
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITD---SDMKP 175
I +G K + TR +L SLNI C T + K
Sbjct: 62 IGDEGAKLIS------------ETR------------QLASLNI----CFTQIGIEEAKL 93
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
+S + L SL IS +++ G ++ +++LT L++ G + ++S + L L++
Sbjct: 94 ISEMRQLTSLNISDNRICVEGAKWISEMRQLTSLDISGNRIGDEGAKTISEMKQLTSLDI 153
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
+ ++ D+G + S++ L LN+ N I DE + ++ + L SL
Sbjct: 154 SYNRIGDEGAKFISEMKQLISLNIRGNRIGDEGVKYISEMKQLTSL 199
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Query: 147 GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKL 206
G L + +L SLNI N I D K +S L SL I +++ + +++L
Sbjct: 42 GAKYLSEMKQLISLNI-GENEIGDEGAKLISETRQLASLNICFTQIGIEEAKLISEMRQL 100
Query: 207 TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
T LN+ + +S + L L+++ ++ D+G + S++ L L++ +N I D
Sbjct: 101 TSLNISDNRICVEGAKWISEMRQLTSLDISGNRIGDEGAKTISEMKQLTSLDISYNRIGD 160
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
E + + L SLN+ IGDEG+ ++ + L L
Sbjct: 161 EGAKFISEMKQLISLNIRGNRIGDEGVKYISEMKQLTSL 199
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 31/186 (16%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDF----------------------NFC 91
S+ L S+D+SG+ + D G +L + L SL+ N C
Sbjct: 23 SEMKQLTSLDISGNRIGDEGAKYLSEMKQLISLNIGENEIGDEGAKLISETRQLASLNIC 82
Query: 92 I-QISDGGLEHLRGLS---NLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGG 147
QI G+E + +S LTSL+ +N I +G K + + L LD+ G
Sbjct: 83 FTQI---GIEEAKLISEMRQLTSLNI-SDNRICVEGAKWISEMRQLTSLDISGNRIGDEG 138
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
+ + +L SL+I + N I D K +S + L SL I +++ D G+ Y+ +++LT
Sbjct: 139 AKTISEMKQLTSLDISY-NRIGDEGAKFISEMKQLISLNIRGNRIGDEGVKYISEMKQLT 197
Query: 208 LLNLEG 213
L +G
Sbjct: 198 SLTYKG 203
>gi|145687803|gb|ABP88874.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687809|gb|ABP88877.1| truncated internalin A precursor [Listeria monocytogenes]
gi|194326155|emb|CAQ77236.1| internalin A [Listeria monocytogenes]
gi|294358379|gb|ADE73842.1| truncated InlA [Listeria monocytogenes]
gi|294358381|gb|ADE73843.1| truncated InlA [Listeria monocytogenes]
gi|294358383|gb|ADE73844.1| truncated InlA [Listeria monocytogenes]
gi|294358385|gb|ADE73845.1| truncated InlA [Listeria monocytogenes]
gi|298359890|gb|ADI77524.1| truncated internalin A [Listeria monocytogenes]
gi|298359938|gb|ADI77548.1| truncated internalin A [Listeria monocytogenes]
gi|298359960|gb|ADI77559.1| truncated internalin A [Listeria monocytogenes]
gi|298360012|gb|ADI77585.1| truncated internalin A [Listeria monocytogenes]
gi|371942072|gb|AEX60848.1| truncated internaline [Listeria monocytogenes]
gi|371942094|gb|AEX60859.1| truncated internaline [Listeria monocytogenes]
gi|371942120|gb|AEX60872.1| truncated internaline [Listeria monocytogenes]
gi|371942130|gb|AEX60877.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNT--ISDISALSGLTSLQQL--SFGNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|371942108|gb|AEX60866.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNT--ISDISALSGLTSLQQL--SFGNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|290981770|ref|XP_002673604.1| hypothetical protein NAEGRDRAFT_58930 [Naegleria gruberi]
gi|284087189|gb|EFC40860.1| hypothetical protein NAEGRDRAFT_58930 [Naegleria gruberi]
Length = 494
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 125/261 (47%), Gaps = 9/261 (3%)
Query: 203 LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
L +LT LN+ V + + L YL+++ +SD+G + S++ L LN+
Sbjct: 224 LHQLTCLNISSNNVGFNTFKPIGNVKQLTYLDVSWNYISDEGAKVLSQLSQLTHLNVNCT 283
Query: 263 EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG 322
I E ++ LT L +L EG + + L L++S +G++G+++LS
Sbjct: 284 IIGIEGAKYISKLTKLRTLIAARNNFWIEGCQYFSEMEQLTALDVSHNSIGNTGIKYLSK 343
Query: 323 LTNLESINLSFTGISDGSLRK---LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
+ L +N++ I+ + + LS L L++ + I G+ A+++++ L L++
Sbjct: 344 MKQLTELNINDNAINQFGTEESKLIRELSQLTKLSISSNNIGIEGVTAISTMSQLRTLNI 403
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRH 433
F RI +GA + +NL L+IC + G + L L+++ + I + G +
Sbjct: 404 FFNRIGLAGAKLISGMQNLTVLDICNNDIGTNGAKEISKMKQLTKLDIARNMIGNEGAKA 463
Query: 434 LKPLKNLRSLTLESCKVTAND 454
LK +K L+SL + ND
Sbjct: 464 LKSMKQLKSLRNTFNNIIWND 484
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 138/335 (41%), Gaps = 43/335 (12%)
Query: 131 INLVKLDLERCTRIHGGLVNLKG---------LMKLESLNIKWCNCITDSDMKPLSGLTN 181
+N+V+ ++ C +V+ K L + ES+N++ + + K
Sbjct: 116 LNVVRERVKLCVEFKNPIVSKKTIKLMMNRECLEQFESMNVRGISRL--QFYKIFEKTKQ 173
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA-----CLDSLSALGSLFYLNLN 236
L L I S + G + L+ L L++ L+S+S L L LN++
Sbjct: 174 LTKLDIGKSIIWLEGFKSITELKHLNSLDMNNMVFMEKESKLELLESISQLHQLTCLNIS 233
Query: 237 RCQLSDDGCEKFSKIGSLK---VLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
++ G F IG++K L++ +N I+DE L L+ L LN++ IG EG
Sbjct: 234 S---NNVGFNTFKPIGNVKQLTYLDVSWNYISDEGAKVLSQLSQLTHLNVNCTIIGIEGA 290
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
++ L L+ L + G ++ S + L ++++S I + ++ L+ + L L
Sbjct: 291 KYISKLTKLRTLIAARNNFWIEGCQYFSEMEQLTALDVSHNSIGNTGIKYLSKMKQLTEL 350
Query: 354 NLDARQITDTGLAA---LTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
N++ I G + L+ LT L + I G + LR+L
Sbjct: 351 NINDNAINQFGTEESKLIRELSQLTKLSISSNNIGIEGVTAISTMSQLRTL--------- 401
Query: 411 AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
N+ +RI AG + + ++NL L +
Sbjct: 402 ---------NIFFNRIGLAGAKLISGMQNLTVLDI 427
>gi|219821354|gb|ACL37814.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
+ GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPIAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|421888174|ref|ZP_16319282.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
solanacearum K60-1]
gi|378966463|emb|CCF96030.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
solanacearum K60-1]
Length = 468
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 176/402 (43%), Gaps = 25/402 (6%)
Query: 40 QYPGVNDKWMDVIASQGSSLLSVDLSGSDVTD-SGLIHLKDCSNLQSLD-FNFCIQISDG 97
+ P + + + ++ + + D+ VT+ +GL K N +L+ + +D
Sbjct: 8 RSPPLTVQRLRAVSKSVKAAVEADIRQLVVTNRAGLAGAKRTGNYPALEKLTLAVPFTDA 67
Query: 98 GLEHLRGLSNLTSLSFRR-NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMK 156
L+ L L L R ITA G+ A + LV+L+L +G + L G +
Sbjct: 68 DLKGL--PPTLKELDLSRCRGGITAAGI-AHLNRLPLVRLNL------NGNRIGLAGAQR 118
Query: 157 LE------SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
L +L++ C I + + L+ L +L +S +++ G+ L + LT L+
Sbjct: 119 LANHPTLTALDVGRCR-IGPEEARELAASARLTTLNVSRNRIGGEGVRALADCKTLTSLD 177
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
+ + A L A L LN+NR ++ G + +L L++G N I DE +
Sbjct: 178 VSENGLGDAEAQRLGASERLTTLNVNRNRIDVPGARALAACKTLTSLDIGGNSIGDEGVD 237
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
L L +LN++ G+G G+ L L L + +G G L+ +L +++
Sbjct: 238 ALVANAQLTTLNVERAGVGAHGVQALADCKTLTSLRIDSNNIGDEGANTLAASISLTTLH 297
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
GI + LA + L +LNL + D G AL + T L L + ++D+GA
Sbjct: 298 SEGNGIGLAGAKALAANTMLTTLNLGHNSVGDAGAQALFANTTLVWLSVRRNGLSDAGAI 357
Query: 391 YLRNFKNLRSLEICGGGLTDAGLTGLVS------LNVSNSRI 426
L + L +L+I + DAG L + LNVS++ I
Sbjct: 358 RLAASRTLTTLDIGDNAIKDAGARALAANRTLTTLNVSSNEI 399
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 128/301 (42%), Gaps = 27/301 (8%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+ L ++++S + + G+ L DC L SLD + + D + L LT+L+ RN
Sbjct: 147 ARLTTLNVSRNRIGGEGVRALADCKTLTSLDVSEN-GLGDAEAQRLGASERLTTLNVNRN 205
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
I G +A A L LD+ + G+ L +L +LN++ + ++ L
Sbjct: 206 R-IDVPGARALAACKTLTSLDIGGNSIGDEGVDALVANAQLTTLNVERAG-VGAHGVQAL 263
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA------------------ 218
+ L SL+I + + D G L LT L+ EG +
Sbjct: 264 ADCKTLTSLRIDSNNIGDEGANTLAASISLTTLHSEGNGIGLAGAKALAANTMLTTLNLG 323
Query: 219 ------ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
A +L A +L +L++ R LSD G + + +L L++G N I D L
Sbjct: 324 HNSVGDAGAQALFANTTLVWLSVRRNGLSDAGAIRLAASRTLTTLDIGDNAIKDAGARAL 383
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
L +LN+ S IG+ G L LK L+L + ++ G+R L L S+ +S
Sbjct: 384 AANRTLTTLNVSSNEIGNAGARALAANARLKSLDLRNNRMLEGGVRALLANRTLSSLGVS 443
Query: 333 F 333
F
Sbjct: 444 F 444
>gi|313485081|gb|ADR53011.1| InlA [Listeria monocytogenes]
Length = 800
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQL--FFGNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|255028812|ref|ZP_05300763.1| internalin A [Listeria monocytogenes LO28]
Length = 502
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 90 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 143
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 144 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQL--SFGNQVTD--LKPL 195
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 196 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 248
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 249 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 302
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 303 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 360
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 361 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 418
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 419 NVSIPNTVKNVTGALIAPATISDGG 443
>gi|297171917|gb|ADI22904.1| hypothetical protein [uncultured Rhizobium sp. HF0500_35F13]
Length = 412
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 85/165 (51%), Gaps = 2/165 (1%)
Query: 198 AYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
A + G + +T+ +T L+ L LG++ YL+L+ + DDG +K+ L+VL
Sbjct: 41 AQVSGTRSVTV-RFTNSALTGKDLEPLGKLGTVHYLDLSDTSVGDDGMVHINKLEGLQVL 99
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGL 317
L EITD L L++L L +GD L L L+++ QV SGL
Sbjct: 100 VLSGTEITDTGFSQLSNLSDLNQLTASEL-MGDGTTAALASATKLNFLDMTGGQVTDSGL 158
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
HLSG+ NL+ + LS T I+D L L ++ L+ L L+ +ITD
Sbjct: 159 SHLSGMKNLKRLTLSRTAITDKGLEHLQSITVLRDLQLNNTKITD 203
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L + L+LSDT VG G+ H++ L L+ + LS T I+D +L+ LS L L +
Sbjct: 69 LGTVHYLDLSDTSVGDDGMVHINKLEGLQVLVLSGTEITDTGFSQLSNLSDLNQLTA-SE 127
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS 418
+ D AAL S T L LD+ G ++TDSG ++L KNL+ L
Sbjct: 128 LMGDGTTAALASATKLNFLDMTGGQVTDSGLSHLSGMKNLKRL----------------- 170
Query: 419 LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
+S + IT GL HL+ + LR L L + K+T
Sbjct: 171 -TLSRTAITDKGLEHLQSITVLRDLQLNNTKIT 202
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
Query: 159 SLNIKWCN-CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
S+ +++ N +T D++PL L + L +S + V D G+ ++ L+ L +L L G +T
Sbjct: 48 SVTVRFTNSALTGKDLEPLGKLGTVHYLDLSDTSVGDDGMVHINKLEGLQVLVLSGTEIT 107
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 277
LS L L L + + D + L L++ ++TD L HL G+ N
Sbjct: 108 DTGFSQLSNLSDLNQLTASEL-MGDGTTAALASATKLNFLDMTGGQVTDSGLSHLSGMKN 166
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQV 312
L+ L L I D+GL +L + L+ L+L++T++
Sbjct: 167 LKRLTLSRTAITDKGLEHLQSITVLRDLQLNNTKI 201
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
Query: 264 ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL 323
+T + L L L + L+L +GD+G+V++ L L+ L LS T++ +G LS L
Sbjct: 58 LTGKDLEPLGKLGTVHYLDLSDTSVGDDGMVHINKLEGLQVLVLSGTEITDTGFSQLSNL 117
Query: 324 TNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGAR 383
++L + S + DG+ LA + L L++ Q+TD+GL+ L+ + L L L
Sbjct: 118 SDLNQLTASEL-MGDGTTAALASATKLNFLDMTGGQVTDSGLSHLSGMKNLKRLTLSRTA 176
Query: 384 ITDSGAAYLRNFKNLRSLEICGGGLTD 410
ITD G +L++ LR L++ +TD
Sbjct: 177 ITDKGLEHLQSITVLRDLQLNNTKITD 203
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 11/147 (7%)
Query: 328 SINLSFT--GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
S+ + FT ++ L L L ++ L+L + D G+ + L GL L L G IT
Sbjct: 48 SVTVRFTNSALTGKDLEPLGKLGTVHYLDLSDTSVGDDGMVHINKLEGLQVLVLSGTEIT 107
Query: 386 DSGAAYLRNFKNLRSL---EICGGGLTDA--GLTGLVSLNVSNSRITSAGLRHLKPLKNL 440
D+G + L N +L L E+ G G T A T L L+++ ++T +GL HL +KNL
Sbjct: 108 DTGFSQLSNLSDLNQLTASELMGDGTTAALASATKLNFLDMTGGQVTDSGLSHLSGMKNL 167
Query: 441 RSLTLESCKVTANDIKRLQS----RDL 463
+ LTL +T ++ LQS RDL
Sbjct: 168 KRLTLSRTAITDKGLEHLQSITVLRDL 194
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR--NNAI 119
+DLS + V D G++H+ LQ L + +I+D G L LS+L L+ +
Sbjct: 75 LDLSDTSVGDDGMVHINKLEGLQVLVLS-GTEITDTGFSQLSNLSDLNQLTASELMGDGT 133
Query: 120 TAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGL 179
TA A A L LD+ GL +L G+ L+ L + ITD ++ L +
Sbjct: 134 TA----ALASATKLNFLDMTGGQVTDSGLSHLSGMKNLKRLTLSRT-AITDKGLEHLQSI 188
Query: 180 TNLKSLQISCSKVTD 194
T L+ LQ++ +K+TD
Sbjct: 189 TVLRDLQLNNTKITD 203
>gi|313485040|gb|ADR52996.1| InlA [Listeria monocytogenes]
Length = 491
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNT--ISDISALSGLTSLQQL--SFGNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|167861930|gb|ACA05664.1| InlA [Listeria monocytogenes]
gi|167862036|gb|ACA05717.1| InlA [Listeria monocytogenes]
gi|194239408|emb|CAQ76844.1| internalin A [Listeria monocytogenes]
gi|222543296|gb|ACM66668.1| internalin A [Listeria monocytogenes]
gi|298359976|gb|ADI77567.1| internalin A [Listeria monocytogenes]
gi|298360582|gb|ADI77870.1| internalin A [Listeria monocytogenes]
gi|298360712|gb|ADI77935.1| internalin A [Listeria monocytogenes]
gi|298360716|gb|ADI77937.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQL--FFGNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|320168280|gb|EFW45179.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 769
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 158/370 (42%), Gaps = 12/370 (3%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVN 150
QI+ GLS LT L + N IT AF GL +L +L L + T I
Sbjct: 91 QITGLSANAFAGLSALTLLDLKGNQ-ITTIPENAFTGLASLQQLWLYTNQITSISANA-- 147
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
GL L L + + N + + +GLT L S+Q+ +++T G+ LT L
Sbjct: 148 FAGLSALTQLWM-YSNPLPNITANAFAGLTALNSMQLDRNQLTSIVANAFAGMPALTDLE 206
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
L+ +T+ + + L +L YLN+ + ++ F+ + +L L L N IT
Sbjct: 207 LQNNAITSISPSAFAGLTALTYLNMVQNHITGISANSFTGLSALNELYLSQNSITVISSN 266
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
GLT L SL L S I T L L L L + S + L L S+
Sbjct: 267 AFNGLTALSSLYLPSNQITSISANVFTNLPALSSLRLQSNSITSISSNAFTNLPALSSLR 326
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
L I+ S L +L +L+L +IT + A T+L GLT L L+ +IT A
Sbjct: 327 LKSNSITSISSNAFTNLPALSALDLSDNEITVIPVNAFTNLPGLTDLKLYANKITTIFAN 386
Query: 391 YLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
L SL++ G +T A LT L L ++ ++IT+ L L L
Sbjct: 387 AFSGLSVLDSLDLSGNLITVIPANAIASLTALNFLYLNENQITNIPANAFASLTALTGLF 446
Query: 445 LESCKVTAND 454
L+ ++ + D
Sbjct: 447 LQQNQLASID 456
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 155/358 (43%), Gaps = 34/358 (9%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN-LKGLMKLESL 160
G+ LT L + NNAIT+ AFAGL L L++ + I G N GL L L
Sbjct: 196 FAGMPALTDLELQ-NNAITSISPSAFAGLTALTYLNMVQ-NHITGISANSFTGLSALNEL 253
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC 220
+ N IT +GLT L SL + +++T L L+ L L+ +T+
Sbjct: 254 YLSQ-NSITVISSNAFNGLTALSSLYLPSNQITSISANVFTNLPALSSLRLQSNSITSIS 312
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
++ + L +L L L ++ F+ + +L L+L NEIT ++ + TNL
Sbjct: 313 SNAFTNLPALSSLRLKSNSITSISSNAFTNLPALSALDLSDNEIT---VIPVNAFTNLP- 368
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
GL +LK L ++ + SGL+ L+S++LS I+
Sbjct: 369 -----------------GLTDLK---LYANKITTIFANAFSGLSVLDSLDLSGNLITVIP 408
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRS 400
+A L++L L L+ QIT+ A SLT LT L L ++ A L
Sbjct: 409 ANAIASLTALNFLYLNENQITNIPANAFASLTALTGLFLQQNQLASIDANAFAGLTALID 468
Query: 401 LEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
L++ +T LT L SL +S ++IT+ L L L L + ++T+
Sbjct: 469 LDLREASITVMPVNAFTALTALTSLYLSLNQITTISANVFASLTALNYLDLSANQITS 526
>gi|384252153|gb|EIE25630.1| hypothetical protein COCSUDRAFT_83637 [Coccomyxa subellipsoidea
C-169]
Length = 433
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 186/379 (49%), Gaps = 25/379 (6%)
Query: 32 ALQ-DLCLGQ-YPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFN 89
ALQ +CL + +P + +MD +G V+++ VT++G + L++L
Sbjct: 56 ALQHPVCLAERFPELQALFMD--GCEG-----VNMTNEQVTEAGRLRY-----LKTLSLA 103
Query: 90 FCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGL 148
C +D GL L + L LS + NA+T++ + +L+ LDL +C + +
Sbjct: 104 GCRACTDKGLAGLAVIEGLQKLSLSKCNALTSRTLDLLQTSSSLISLDLGQCAWVDDSSM 163
Query: 149 VNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLT 207
L L+ L++ C +T+ ++ ++ L +++L +S ++ D+G+ L + L
Sbjct: 164 ALLCNSASLKQLSLADCVRLTNRGVQSVAKLKCIEALNLSGLREIDDAGVEALAAVTSLR 223
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGF-NEIT 265
LNL+ C +L+ LG L L++ C ++DD S + SL+ L L ++IT
Sbjct: 224 ELNLDRCGQVRGL--TLAKLGGLHKLSMCDCPCIADDSLGCLSGVTSLEDLKLDMCDKIT 281
Query: 266 DECLVHLKGLTNLESLNLDSCGIGD-EGLVNLTGLCNLKCLELSD-TQVGSSGLRHLS-G 322
D+ L ++ LE L+L C D E + L+ L L+ L LS + + GL HL+ G
Sbjct: 282 DKGAGALASMSALEDLDLHRCERLDCEAMRRLSALGQLRSLRLSGCVYIKAEGLGHLARG 341
Query: 323 LTNLESINLS-FTGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLTGLTHLDLF 380
L ++L+ GI D ++ LA + L++LN++ + ++D G A L + + + +
Sbjct: 342 CPLLSRLDLAGCVGIKDEGMQALAEMQHLQALNINQCKYVSDAGAAVLATSVSIRDVFVL 401
Query: 381 GARITDSGAAYLRNFKNLR 399
I+ G L++ L+
Sbjct: 402 TTNISQHGLQLLQDALGLQ 420
>gi|223698697|gb|ACN19038.1| truncated internalin A [Listeria monocytogenes]
gi|223698841|gb|ACN19134.1| truncated internalin A [Listeria monocytogenes]
gi|223698877|gb|ACN19158.1| truncated internalin A [Listeria monocytogenes]
gi|223698922|gb|ACN19188.1| truncated internalin A [Listeria monocytogenes]
Length = 406
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 67 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQL--SFGNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|298359722|gb|ADI77440.1| truncated internalin A [Listeria monocytogenes]
gi|298359752|gb|ADI77455.1| truncated internalin A [Listeria monocytogenes]
gi|298359762|gb|ADI77460.1| truncated internalin A [Listeria monocytogenes]
gi|298359812|gb|ADI77485.1| truncated internalin A [Listeria monocytogenes]
gi|298359814|gb|ADI77486.1| truncated internalin A [Listeria monocytogenes]
gi|298359858|gb|ADI77508.1| truncated internalin A [Listeria monocytogenes]
gi|298359886|gb|ADI77522.1| truncated internalin A [Listeria monocytogenes]
gi|298359900|gb|ADI77529.1| truncated internalin A [Listeria monocytogenes]
gi|298359906|gb|ADI77532.1| truncated internalin A [Listeria monocytogenes]
gi|298359912|gb|ADI77535.1| truncated internalin A [Listeria monocytogenes]
gi|298359944|gb|ADI77551.1| truncated internalin A [Listeria monocytogenes]
gi|298359980|gb|ADI77569.1| truncated internalin A [Listeria monocytogenes]
gi|298359990|gb|ADI77574.1| truncated internalin A [Listeria monocytogenes]
gi|298359992|gb|ADI77575.1| truncated internalin A [Listeria monocytogenes]
gi|298359994|gb|ADI77576.1| truncated internalin A [Listeria monocytogenes]
gi|298360008|gb|ADI77583.1| truncated internalin A [Listeria monocytogenes]
gi|298360026|gb|ADI77592.1| truncated internalin A [Listeria monocytogenes]
gi|298360060|gb|ADI77609.1| truncated internalin A [Listeria monocytogenes]
gi|298360078|gb|ADI77618.1| truncated internalin A [Listeria monocytogenes]
gi|298360082|gb|ADI77620.1| truncated internalin A [Listeria monocytogenes]
gi|298360096|gb|ADI77627.1| truncated internalin A [Listeria monocytogenes]
gi|298360142|gb|ADI77650.1| truncated internalin A [Listeria monocytogenes]
gi|298360144|gb|ADI77651.1| truncated internalin A [Listeria monocytogenes]
gi|298360146|gb|ADI77652.1| truncated internalin A [Listeria monocytogenes]
gi|298360160|gb|ADI77659.1| truncated internalin A [Listeria monocytogenes]
gi|298360192|gb|ADI77675.1| truncated internalin A [Listeria monocytogenes]
gi|298360252|gb|ADI77705.1| truncated internalin A [Listeria monocytogenes]
gi|298360274|gb|ADI77716.1| truncated internalin A [Listeria monocytogenes]
gi|298360276|gb|ADI77717.1| truncated internalin A [Listeria monocytogenes]
gi|298360296|gb|ADI77727.1| truncated internalin A [Listeria monocytogenes]
gi|298360304|gb|ADI77731.1| truncated internalin A [Listeria monocytogenes]
gi|298360316|gb|ADI77737.1| truncated internalin A [Listeria monocytogenes]
gi|298360320|gb|ADI77739.1| truncated internalin A [Listeria monocytogenes]
gi|298360336|gb|ADI77747.1| truncated internalin A [Listeria monocytogenes]
gi|298360342|gb|ADI77750.1| truncated internalin A [Listeria monocytogenes]
gi|298360348|gb|ADI77753.1| truncated internalin A [Listeria monocytogenes]
gi|298360374|gb|ADI77766.1| truncated internalin A [Listeria monocytogenes]
gi|298360380|gb|ADI77769.1| truncated internalin A [Listeria monocytogenes]
gi|298360404|gb|ADI77781.1| truncated internalin A [Listeria monocytogenes]
gi|298360414|gb|ADI77786.1| truncated internalin A [Listeria monocytogenes]
gi|298360426|gb|ADI77792.1| truncated internalin A [Listeria monocytogenes]
gi|298360458|gb|ADI77808.1| truncated internalin A [Listeria monocytogenes]
gi|298360464|gb|ADI77811.1| truncated internalin A [Listeria monocytogenes]
gi|298360488|gb|ADI77823.1| truncated internalin A [Listeria monocytogenes]
gi|298360492|gb|ADI77825.1| truncated internalin A [Listeria monocytogenes]
gi|298360518|gb|ADI77838.1| truncated internalin A [Listeria monocytogenes]
gi|298360538|gb|ADI77848.1| truncated internalin A [Listeria monocytogenes]
gi|298360562|gb|ADI77860.1| truncated internalin A [Listeria monocytogenes]
gi|298360594|gb|ADI77876.1| truncated internalin A [Listeria monocytogenes]
gi|298360616|gb|ADI77887.1| truncated internalin A [Listeria monocytogenes]
gi|298360654|gb|ADI77906.1| truncated internalin A [Listeria monocytogenes]
gi|298360660|gb|ADI77909.1| truncated internalin A [Listeria monocytogenes]
gi|298360668|gb|ADI77913.1| truncated internalin A [Listeria monocytogenes]
gi|298360690|gb|ADI77924.1| truncated internalin A [Listeria monocytogenes]
gi|298360696|gb|ADI77927.1| truncated internalin A [Listeria monocytogenes]
gi|298360720|gb|ADI77939.1| truncated internalin A [Listeria monocytogenes]
gi|443428784|gb|AGC92191.1| truncated internalin A [Listeria monocytogenes]
gi|443428786|gb|AGC92192.1| truncated internalin A [Listeria monocytogenes]
gi|443428790|gb|AGC92194.1| truncated internalin A [Listeria monocytogenes]
gi|443428794|gb|AGC92196.1| truncated internalin A [Listeria monocytogenes]
gi|443428808|gb|AGC92203.1| truncated internalin A [Listeria monocytogenes]
gi|443428810|gb|AGC92204.1| truncated internalin A [Listeria monocytogenes]
gi|443428828|gb|AGC92213.1| truncated internalin A [Listeria monocytogenes]
gi|443428866|gb|AGC92232.1| truncated internalin A [Listeria monocytogenes]
gi|443428874|gb|AGC92236.1| truncated internalin A [Listeria monocytogenes]
gi|443428876|gb|AGC92237.1| truncated internalin A [Listeria monocytogenes]
Length = 699
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|223698952|gb|ACN19208.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 67 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQL--FFGNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|441473145|emb|CCQ22899.1| Internalin-A [Listeria monocytogenes N53-1]
Length = 455
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNT--ISDISALSGLTSLQQL--SFGNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|167861956|gb|ACA05677.1| InlA [Listeria monocytogenes]
Length = 800
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 180/383 (46%), Gaps = 56/383 (14%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
+ LT L+ L IS +KV+D S +A L L+ L N + +T L L +L L+L
Sbjct: 204 ANLTTLERLDISSNKVSDISVLARLPTLESLIATNNQISDITP-----LGILTNLDELSL 258
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
N QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 259 NGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--ISP 312
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK-------- 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 313 LAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN 370
Query: 344 --------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN- 394
LA L+++ L+ QI+D L L +LT +T L L T++ Y N
Sbjct: 371 NKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKANV 428
Query: 395 -----FKNLRSLEICGGGLTDAG 412
KN+ I ++D G
Sbjct: 429 SIPNTVKNVTGALIAPATISDGG 451
>gi|167861900|gb|ACA05649.1| InlA [Listeria monocytogenes]
gi|194326161|emb|CAQ77239.1| internalin A [Listeria monocytogenes]
gi|298360364|gb|ADI77761.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|371942138|gb|AEX60881.1| internaline [Listeria monocytogenes]
Length = 789
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNAPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|167862030|gb|ACA05714.1| InlA [Listeria monocytogenes]
Length = 576
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 152 NHIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQL--SFGNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|167861940|gb|ACA05669.1| InlA [Listeria monocytogenes]
gi|167861954|gb|ACA05676.1| InlA [Listeria monocytogenes]
gi|194239400|emb|CAQ76840.1| internalin A [Listeria monocytogenes]
gi|298360640|gb|ADI77899.1| truncated internalin A [Listeria monocytogenes]
gi|298360688|gb|ADI77923.1| truncated internalin A [Listeria monocytogenes]
gi|443428860|gb|AGC92229.1| truncated internalin A [Listeria monocytogenes]
gi|443428878|gb|AGC92238.1| truncated internalin A [Listeria monocytogenes]
Length = 684
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|384252696|gb|EIE26172.1| RNI-like protein [Coccomyxa subellipsoidea C-169]
Length = 663
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 153/336 (45%), Gaps = 24/336 (7%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-----GLVNLKGLMK 156
L GLS L L F NA+ G + L +L L + G G LK L K
Sbjct: 194 LGGLSRLQHLQF---NAVAFDGRTLISKLSSLQGLRQLEMANVVGAYPAEGDAFLKSLTK 250
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQ-ISCSKVTD---SGIAYLKGLQKLTLLNLE 212
L SL ++ N + + P+ L+ L+SLQ +S ++ G+ L L L L L
Sbjct: 251 LSSLRMR--NDSATAKLPPMHCLSELRSLQELSLTEHLHLLLPGLTNLSALTDLRQLRLV 308
Query: 213 GCPVTAACLDSLSALGSLFYLNL-NRCQLSDDGCEKFSKIGSLKVLNLGF------NEIT 265
VT L AL L L++ + +++D G S + L L+ +IT
Sbjct: 309 KVGVTNGVLRCAGALTKLQSLHIPDAFRVTDTGLHHLSSLTGLTHLDFCSPSHRRDEDIT 368
Query: 266 DECLVHLKGLTNLESLNLD-SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG-LRHLSGL 323
+ + L LTNL SLNL + EGL L L CL+LS +G +G + L+ L
Sbjct: 369 NAGVAALSALTNLRSLNLAGHSEVTAEGLAFLADATALTCLDLSGLPLGPTGGVDFLASL 428
Query: 324 TNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGAR 383
TNL S+ L T +S+ +++L L++L SL L I D AAL LT L LD+
Sbjct: 429 TNLRSLCLQRTQLSNEHVQQLGSLTALTSLGLAWCAIDDEAAAALAPLTKLADLDVRYCP 488
Query: 384 ITDSGAAYL-RNFKNLRSLEICGGGLTDAGLTGLVS 418
+T++G L R +L + G T G+ L+S
Sbjct: 489 MTNAGLCQLSRAMPDLAIFAVEGCPATSIGIWRLLS 524
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 82/184 (44%), Gaps = 38/184 (20%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQ-------ISDGGLEHLRGLSNLTSLSFRRNNAITA 121
VTD+GL HL + L LDF C I++ G+ L L+NL SL+ ++ +TA
Sbjct: 337 VTDTGLHHLSSLTGLTHLDF--CSPSHRRDEDITNAGVAALSALTNLRSLNLAGHSEVTA 394
Query: 122 QGMKAF--------------------------AGLINLVKLDLERCTRIHGGLVNLKGLM 155
+G+ AF A L NL L L+R + + L L
Sbjct: 395 EGL-AFLADATALTCLDLSGLPLGPTGGVDFLASLTNLRSLCLQRTQLSNEHVQQLGSLT 453
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYL-KGLQKLTLLNLEGC 214
L SL + WC I D L+ LT L L + +T++G+ L + + L + +EGC
Sbjct: 454 ALTSLGLAWC-AIDDEAAAALAPLTKLADLDVRYCPMTNAGLCQLSRAMPDLAIFAVEGC 512
Query: 215 PVTA 218
P T+
Sbjct: 513 PATS 516
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 6/176 (3%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF-----RRNNAITAQGMKAFAGLINLVK 135
+ LQSL +++D GL HL L+ LT L F RR+ IT G+ A + L NL
Sbjct: 324 TKLQSLHIPDAFRVTDTGLHHLSSLTGLTHLDFCSPSHRRDEDITNAGVAALSALTNLRS 383
Query: 136 LDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD 194
L+L + + GL L L L++ + L+ LTNL+SL + +++++
Sbjct: 384 LNLAGHSEVTAEGLAFLADATALTCLDLSGLPLGPTGGVDFLASLTNLRSLCLQRTQLSN 443
Query: 195 SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
+ L L LT L L C + +L+ L L L++ C +++ G + S+
Sbjct: 444 EHVQQLGSLTALTSLGLAWCAIDDEAAAALAPLTKLADLDVRYCPMTNAGLCQLSR 499
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 91/192 (47%), Gaps = 41/192 (21%)
Query: 272 LKGLTNLESLNL--DSCGIGDEGLVNLTGLCNLKCLELSDT-QVGSSGLRHLSGLTNLES 328
LK LT L SL + DS + L+ L +L+ L L++ + GL +LS LT+L
Sbjct: 245 LKSLTKLSSLRMRNDSATAKLPPMHCLSELRSLQELSLTEHLHLLLPGLTNLSALTDLRQ 304
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDS 387
+ L G+++G LR L+ L+SL++ DA ++TDTGL L+SLTGLTH
Sbjct: 305 LRLVKVGVTNGVLRCAGALTKLQSLHIPDAFRVTDTGLHHLSSLTGLTH----------- 353
Query: 388 GAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE- 446
L+ C + + IT+AG+ L L NLRSL L
Sbjct: 354 -------------LDFCSPS------------HRRDEDITNAGVAALSALTNLRSLNLAG 388
Query: 447 SCKVTANDIKRL 458
+VTA + L
Sbjct: 389 HSEVTAEGLAFL 400
>gi|112961793|gb|ABI28548.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 122/378 (32%), Positives = 175/378 (46%), Gaps = 60/378 (15%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
S + +TD + LKD + L + N QI+D + L LSNLT L+ NN IT
Sbjct: 1 FSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-NNQIT--D 52
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+ L NL +L+L T + L GL L+ L+ N +TD +KPL+ LT L+
Sbjct: 53 IDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPLANLTTLE 106
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYLNLNRCQL 240
L IS +KV+D + L KLT NLE T + ++ LG +L L+LN QL
Sbjct: 107 RLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDELSLNGNQL 159
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D G + + +L L+L N+I++ L L GLT L L L + I + + L GL
Sbjct: 160 KDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--ISPLAGLT 213
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------------- 343
L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 214 ALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSD 271
Query: 344 ---LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN------ 394
LA L+++ L+ QI+D L L +LT +T L L T+ Y N
Sbjct: 272 VSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKVNVSIPNT 329
Query: 395 FKNLRSLEICGGGLTDAG 412
KN+ I ++D G
Sbjct: 330 VKNVTGALIAPATISDGG 347
>gi|12581504|gb|AAG59625.1| GU1 [Trypanosoma brucei]
gi|261333153|emb|CBH16148.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 846
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 205/457 (44%), Gaps = 92/457 (20%)
Query: 27 AFRDC-ALQDLCLGQYPGVND-KWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQ 84
+F C LQ L L V+D +W+ + + L ++DLS ++V L L+ C L
Sbjct: 364 SFVHCRQLQQLKLSCCRRVSDVRWLAAL----TCLRTLDLSHTNVRSRWLESLRACRYLV 419
Query: 85 SLDFNFC---IQIS----------------DGGLEHLRGLSNLTSLSFRR-NNAITAQGM 124
L+ +C +++S D G ++L + L+F + + + +
Sbjct: 420 ELNVAYCRDVVEVSFLSELRLLKHLDLSGTDIGEQNLDPIGQCEGLTFLLLKDCSSVKDL 479
Query: 125 KAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
L LVKLD ER + + + KLE L+ ++C+ +TD +K L GL NLK+
Sbjct: 480 HFLETLRELVKLDTERTGIMDANVCQVVACKKLEFLSFRYCHLLTD--VKCLEGLRNLKT 537
Query: 185 LQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
L ++ + VT+ GI+ SL SL Y++++ C L
Sbjct: 538 LDLAGTNVTNEGIS------------------------SLPKCVSLEYVDVSECCL---- 569
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
+ +L F L+ L NL+ + D + D G LTG +L+
Sbjct: 570 -----------ITHLEF----------LRPLPNLQQVVADQMNLTDIG--GLTGAPSLRR 606
Query: 305 LELSDTQ-VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL-NLDARQI-T 361
+ L++++ +G+ G L L+ ++L + IS+ +R L L+S +SL +LD + +
Sbjct: 607 VTLNESKRLGTVGEVRLP---YLQELSLRKSTISNAGIRSL--LASCRSLQHLDMQHCHS 661
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG-GGLTD----AGLTGL 416
T L+AL+ L L L L R+T ++ + NLR L++ +TD + L L
Sbjct: 662 VTELSALSQLPNLRELLLRNIRVTGEFMTHIASCVNLRKLQMTECADITDVNCLSALQSL 721
Query: 417 VSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAN 453
+++S + +T+ G++ L LR L L C+ N
Sbjct: 722 EDIDLSRTSVTTEGIKGLSKCYALRKLNLSECRYVTN 758
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 184/427 (43%), Gaps = 73/427 (17%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L S+ L + +++ + + +C+NL+ + + C + LE L LT LS N
Sbjct: 206 LRSLTLFATPLSNQIMSYFCECTNLERVVVDSCCGLV--SLECFAALQRLTHLSVL-NCT 262
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
IT +G+ + +L + L+ C MKL SLN L
Sbjct: 263 ITDEGLPPISKCFSLQYVMLDNC-------------MKLRSLNC-------------LGS 296
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
L NL++L +S +++ + G+ L+ L+ L +L A ++ +S+LGSL L+L
Sbjct: 297 LRNLRTLIVSRNRIPEEGVQGLRKLRDLEVLRFSVFNRPTA-VEFISSLGSLVELDLRDN 355
Query: 239 QLSDDGCEKF-----------------------SKIGSLKVLNLGFNEITDECLVHLKGL 275
+ D GC F + + L+ L+L + L L+
Sbjct: 356 WVGDAGCASFVHCRQLQQLKLSCCRRVSDVRWLAALTCLRTLDLSHTNVRSRWLESLRAC 415
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 335
L LN+ C E + L+ L LK L+LS T +G L + + L+F
Sbjct: 416 RYLVELNVAYCRDVVE-VSFLSELRLLKHLDLSGTDIGEQNLDPIG-----QCEGLTFLL 469
Query: 336 ISD-GSLRKLAGLSSLKSL-NLDARQ--ITDTGLAALTSLTGLTHLDL-FGARITDSGAA 390
+ D S++ L L +L+ L LD + I D + + + L L + +TD
Sbjct: 470 LKDCSSVKDLHFLETLRELVKLDTERTGIMDANVCQVVACKKLEFLSFRYCHLLTDVKC- 528
Query: 391 YLRNFKNLRSLEICGGGLTDAGLTGL---VSL---NVSNSRITSAGLRHLKPLKNLRSLT 444
L +NL++L++ G +T+ G++ L VSL +VS + + L L+PL NL+ +
Sbjct: 529 -LEGLRNLKTLDLAGTNVTNEGISSLPKCVSLEYVDVSECCLIT-HLEFLRPLPNLQQVV 586
Query: 445 LESCKVT 451
+ +T
Sbjct: 587 ADQMNLT 593
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 188/426 (44%), Gaps = 42/426 (9%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQ----------------------ISDGGLEHLRGLS 106
+TD GL + C +LQ + + C++ I + G++ LR L
Sbjct: 263 ITDEGLPPISKCFSLQYVMLDNCMKLRSLNCLGSLRNLRTLIVSRNRIPEEGVQGLRKLR 322
Query: 107 NLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCN 166
+L L F N TA ++ + L +LV+LDL G + +L+ L + C
Sbjct: 323 DLEVLRFSVFNRPTA--VEFISSLGSLVELDLRDNWVGDAGCASFVHCRQLQQLKLSCCR 380
Query: 167 CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA 226
+ SD++ L+ LT L++L +S + V + L+ + L LN+ C + LS
Sbjct: 381 RV--SDVRWLAALTCLRTLDLSHTNVRSRWLESLRACRYLVELNVAYCRDVVE-VSFLSE 437
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG-FNEITDECLVHLKGLTNLESLNLDS 285
L L +L+L+ + + + + L L L + + D L L+ L L L+ +
Sbjct: 438 LRLLKHLDLSGTDIGEQNLDPIGQCEGLTFLLLKDCSSVKD--LHFLETLRELVKLDTER 495
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
GI D + + L+ L + + ++ L GL NL++++L+ T +++ + L
Sbjct: 496 TGIMDANVCQVVACKKLEFLSFRYCHL-LTDVKCLEGLRNLKTLDLAGTNVTNEGISSLP 554
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD----SGAAYLRNFKNLRSL 401
SL+ +++ + T L L L L + +TD +GA LR S
Sbjct: 555 KCVSLEYVDVSECCLI-THLEFLRPLPNLQQVVADQMNLTDIGGLTGAPSLRRVTLNESK 613
Query: 402 EICGGGLTDAGLTGLVSLNVSNSRITSAGLRH-LKPLKNLRSLTLESCKVTANDIKRLQS 460
+ G + + L L L++ S I++AG+R L ++L+ L ++ C + ++ L
Sbjct: 614 RL--GTVGEVRLPYLQELSLRKSTISNAGIRSLLASCRSLQHLDMQHCH-SVTELSALS- 669
Query: 461 RDLPNL 466
LPNL
Sbjct: 670 -QLPNL 674
>gi|223698700|gb|ACN19040.1| truncated internalin A [Listeria monocytogenes]
Length = 599
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|219821381|gb|ACL37832.1| internalin A [Listeria monocytogenes]
gi|219821384|gb|ACL37834.1| internalin A [Listeria monocytogenes]
Length = 741
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 40 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 93
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 94 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 145
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +K++D + L KLT NLE T + ++ LG +L L
Sbjct: 146 ANLTTLERLDISSNKLSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 198
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 199 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 252
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 253 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 310
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 311 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKV 368
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 369 NVSIPNTVKNVTGALIAPATISDGG 393
>gi|148607496|gb|ABQ95524.1| InlA [Listeria monocytogenes]
Length = 730
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQL--SFGNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|371942142|gb|AEX60883.1| internaline [Listeria monocytogenes]
Length = 790
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|357615345|gb|EHJ69606.1| hypothetical protein KGM_07261 [Danaus plexippus]
Length = 438
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 144/290 (49%), Gaps = 37/290 (12%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGS-DVTDSGLIHLK-DCSNLQSLDFN 89
AL+ L L V D + IA +L ++L G +VTD+GL+ + L+ L+
Sbjct: 166 ALKRLDLSLCKQVTDSSLGRIAQSLKNLEELELGGCCNVTDTGLLLIAWGLRKLRRLNLR 225
Query: 90 FCIQISDGGLEHL------RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTR 143
C ++D G+ HL RG L L + +T + +K A
Sbjct: 226 SCWHVNDDGIAHLCGGGEARGTPELEHLGLQDCQRLTDEALKHAA--------------- 270
Query: 144 IHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKG 202
GL KL+S+N+ +C +TD+ ++ L+ L +L+ + + +C V+D+G+A+L
Sbjct: 271 --------TGLPKLKSINLSFCVAVTDAGLRHLARLPHLEDVNLRACDGVSDAGVAHLAE 322
Query: 203 LQKLTLLNLEGCPVTAACLDSLSALG--SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG 260
+L L++ C S + LG L L+L+ C+L+D+G E+ +++ L+ LN+G
Sbjct: 323 SGRLRALDVSFCDKVGDEALSHATLGLSGLRCLSLSACRLTDEGLERVARLSQLETLNIG 382
Query: 261 -FNEITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL 307
++TD L L +GL NL++++L C I EGL ++ L L L L
Sbjct: 383 QCTQVTDRGLRALGEGLKNLKAIDLYGCTCITHEGLDHIVKLPRLSVLNL 432
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 147/298 (49%), Gaps = 41/298 (13%)
Query: 182 LKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSA--LGSLFYLNLNR 237
++ LQ+ S + +A L GL+ L+L GC VT A L S A L +L L+L+
Sbjct: 118 VRRLQVLSLRRGLRDAVAALPGLESLSL---SGCYSVTDAALASAFATELPALKRLDLSL 174
Query: 238 C-QLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHLK-GLTNLESLNLDSCG-IGDEG 292
C Q++D + ++ + +L+ L LG +TD L+ + GL L LNL SC + D+G
Sbjct: 175 CKQVTDSSLGRIAQSLKNLEELELGGCCNVTDTGLLLIAWGLRKLRRLNLRSCWHVNDDG 234
Query: 293 LVNL------TGLCNLKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSF-TGISDGSLRK 343
+ +L G L+ L L D Q + L+H + GL L+SINLSF ++D LR
Sbjct: 235 IAHLCGGGEARGTPELEHLGLQDCQRLTDEALKHAATGLPKLKSINLSFCVAVTDAGLRH 294
Query: 344 LAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSL 401
LA L L+ +NL A ++D G+A L L LD+ F ++ D ++
Sbjct: 295 LARLPHLEDVNLRACDGVSDAGVAHLAESGRLRALDVSFCDKVGDEALSH---------- 344
Query: 402 EICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC-KVTANDIKRL 458
GL+GL L++S R+T GL + L L +L + C +VT ++ L
Sbjct: 345 -------ATLGLSGLRCLSLSACRLTDEGLERVARLSQLETLNIGQCTQVTDRGLRAL 395
>gi|427793023|gb|JAA61963.1| Putative f-box and leucine-rich repeat protein 14a, partial
[Rhipicephalus pulchellus]
Length = 372
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 149/312 (47%), Gaps = 53/312 (16%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHL--KDCSNLQSLDF 88
+L +L L + D + IA L +DL G +DVT++GL HL NL+SL+
Sbjct: 82 SLTELNLSMCKQITDNSLGRIAQHLQGLERLDLGGCTDVTNTGL-HLIAWGLHNLRSLNL 140
Query: 89 NFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGL 148
C +SD G+ HL G++ N+AI G + L L L+ C ++
Sbjct: 141 RSCRGVSDPGISHLAGINP--------NSAI---------GTLRLESLCLQDCQKLTDDA 183
Query: 149 VNLK--GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYL-KGLQ 204
+ GL L SLN+ +C +TD+ +K + + L+ L + SC ++D G+AYL +G
Sbjct: 184 LRFISIGLQDLRSLNLSFCASVTDAGLKHAARMARLRELNLRSCDNISDLGLAYLAEGGS 243
Query: 205 KLTLLNLEGCPVTA--ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
+++ L++ C L + L L L+LN C +SDDG + +
Sbjct: 244 RISTLDVSFCDKVGDQGLLHASQGLFQLRSLSLNACPVSDDGIGRVA------------- 290
Query: 263 EITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRH 319
+ L +L++L+L CG + D+GL + L L+C++L T++ + GL
Sbjct: 291 ----------RSLGDLQTLHLGQCGRVTDKGLSLIADHLKQLRCIDLYGCTKITTVGLEK 340
Query: 320 LSGLTNLESINL 331
L L NL +NL
Sbjct: 341 LMQLPNLGVLNL 352
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 154/303 (50%), Gaps = 24/303 (7%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFA-GLINL 133
++ NL+SL+ C ++D L H ++ + +LT L+ IT + A L L
Sbjct: 50 IQGVPNLESLNMIGCFNLTDAWLNHAFVQDVHSLTELNLSMCKQITDNSLGRIAQHLQGL 109
Query: 134 VKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLT--------NLK 183
+LDL CT + ++L GL L SLN++ C ++D + L+G+ L+
Sbjct: 110 ERLDLGGCTDVTNTGLHLIAWGLHNLRSLNLRSCRGVSDPGISHLAGINPNSAIGTLRLE 169
Query: 184 SLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-Q 239
SL + C K+TD + ++ GLQ L LNL C VT A L + + L LNL C
Sbjct: 170 SLCLQDCQKLTDDALRFISIGLQDLRSLNLSFCASVTDAGLKHAARMARLRELNLRSCDN 229
Query: 240 LSDDGCEKFSKIGS-LKVLNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGLVNL 296
+SD G ++ GS + L++ F +++ D+ L+H +GL L SL+L++C + D+G+ +
Sbjct: 230 ISDLGLAYLAEGGSRISTLDVSFCDKVGDQGLLHASQGLFQLRSLSLNACPVSDDGIGRV 289
Query: 297 T-GLCNLKCLELSDT-QVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKLAGLSSLKS 352
L +L+ L L +V GL ++ L L I+L T I+ L KL L +L
Sbjct: 290 ARSLGDLQTLHLGQCGRVTDKGLSLIADHLKQLRCIDLYGCTKITTVGLEKLMQLPNLGV 349
Query: 353 LNL 355
LNL
Sbjct: 350 LNL 352
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 142/298 (47%), Gaps = 50/298 (16%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKP--LSGLTNLKSLQIS-CSKVTDSGIA----YLKGL 203
++G+ LESLN+ C +TD+ + + + +L L +S C ++TD+ + +L+GL
Sbjct: 50 IQGVPNLESLNMIGCFNLTDAWLNHAFVQDVHSLTELNLSMCKQITDNSLGRIAQHLQGL 109
Query: 204 QKLTL-----------------------LNLEGCPVTA-------ACLDSLSALGSLFY- 232
++L L LNL C + A ++ SA+G+L
Sbjct: 110 ERLDLGGCTDVTNTGLHLIAWGLHNLRSLNLRSCRGVSDPGISHLAGINPNSAIGTLRLE 169
Query: 233 -LNLNRCQLSDDGCEKFSKIG--SLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-G 287
L L CQ D +F IG L+ LNL F +TD L H + L LNL SC
Sbjct: 170 SLCLQDCQKLTDDALRFISIGLQDLRSLNLSFCASVTDAGLKHAARMARLRELNLRSCDN 229
Query: 288 IGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINLSFTGISDGSLRKL 344
I D GL L G + L++S +VG GL H S GL L S++L+ +SD + ++
Sbjct: 230 ISDLGLAYLAEGGSRISTLDVSFCDKVGDQGLLHASQGLFQLRSLSLNACPVSDDGIGRV 289
Query: 345 A-GLSSLKSLNL-DARQITDTGLAALT-SLTGLTHLDLFG-ARITDSGAAYLRNFKNL 398
A L L++L+L ++TD GL+ + L L +DL+G +IT G L NL
Sbjct: 290 ARSLGDLQTLHLGQCGRVTDKGLSLIADHLKQLRCIDLYGCTKITTVGLEKLMQLPNL 347
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 113/240 (47%), Gaps = 53/240 (22%)
Query: 272 LKGLTNLESLNLDSCGIGDEGLVN---------LTGLCNLKCLELSD------------- 309
++G+ NLESLN+ C + +N LT L C +++D
Sbjct: 50 IQGVPNLESLNMIGCFNLTDAWLNHAFVQDVHSLTELNLSMCKQITDNSLGRIAQHLQGL 109
Query: 310 --------TQVGSSGLRHLS-GLTNLESINL-SFTGISDGSLRKLAGL---SSLKSLNL- 355
T V ++GL ++ GL NL S+NL S G+SD + LAG+ S++ +L L
Sbjct: 110 ERLDLGGCTDVTNTGLHLIAWGLHNLRSLNLRSCRGVSDPGISHLAGINPNSAIGTLRLE 169
Query: 356 -----DARQITDTGLAALT-SLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG-GG 407
D +++TD L ++ L L L+L F A +TD+G + LR L +
Sbjct: 170 SLCLQDCQKLTDDALRFISIGLQDLRSLNLSFCASVTDAGLKHAARMARLRELNLRSCDN 229
Query: 408 LTDAGLTGLV-------SLNVSN-SRITSAGLRHL-KPLKNLRSLTLESCKVTANDIKRL 458
++D GL L +L+VS ++ GL H + L LRSL+L +C V+ + I R+
Sbjct: 230 ISDLGLAYLAEGGSRISTLDVSFCDKVGDQGLLHASQGLFQLRSLSLNACPVSDDGIGRV 289
>gi|302767392|ref|XP_002967116.1| hypothetical protein SELMODRAFT_87311 [Selaginella moellendorffii]
gi|300165107|gb|EFJ31715.1| hypothetical protein SELMODRAFT_87311 [Selaginella moellendorffii]
Length = 637
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 204/436 (46%), Gaps = 50/436 (11%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI 92
LQ + L G++D + +AS L ++D+S +++TD G+ L + +L+ L+ C
Sbjct: 171 LQVVVLKGCVGISDAGLCFLASNCKELTTIDVSYTEITDDGVRCLSNLPSLRVLNLAACS 230
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT------RIHG 146
+ D GL R ++L L ++T G+ +F +L L L C+ +I G
Sbjct: 231 NVGDAGLT--RTSTSLLELDLSCCRSVTNVGI-SFLSKRSLQFLKLGFCSPVKKRSQITG 287
Query: 147 GLVNLKG-LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYL---- 200
L+ G L ++++L + C D S L L +S C VTDSG+A +
Sbjct: 288 QLLEAVGKLTQIQTLKLAGCEIAGDGLRFVGSCCLQLSDLSLSKCRGVTDSGMASIFHGC 347
Query: 201 KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG 260
K L+KL L CLD L + N+ R S G KI + ++L
Sbjct: 348 KNLRKLDL---------TCCLD----LTEITAYNIAR---SSAGLVSL-KIEACRILT-- 388
Query: 261 FNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
N I + ++ + LE L++ C I D GL + LK L+L +V +G+ H+
Sbjct: 389 ENNIP----LLMERCSCLEELDVTDCNIDDAGLECIAKCKFLKTLKLGFCKVSDNGIEHV 444
Query: 321 -SGLTNLESINLSFTG-ISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALTSLTGLTH 376
++L ++L +G + D + +A G L+ LNL ITD + +++ L+ L
Sbjct: 445 GRNCSDLIELDLYRSGNVGDAGVASIAAGCRKLRILNLSYCPNITDASIVSISQLSHLQQ 504
Query: 377 LDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLV-------SLNVSNSRITSA 429
L++ G + L FKNL L++ G+ D G+T +V LN+S RI++A
Sbjct: 505 LEIRGCKRVGL-EKKLPEFKNLVELDLKHCGIGDRGMTSIVYCFPNLQQLNLSYCRISNA 563
Query: 430 GLRHLKPLKNLRSLTL 445
GL L L+ L+++ L
Sbjct: 564 GLVMLGNLRCLQNVKL 579
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 191/430 (44%), Gaps = 81/430 (18%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLRGLS--NLTSLSFRRNNAITAQGMKAFA---------- 128
+ ++SLD + CI+I+D L + L+ L SL R T G+ A A
Sbjct: 65 TGIESLDLSSCIKITDEDLALVGELAGTRLRSLGLARMGGFTVAGIVALARNCSALVELD 124
Query: 129 ----------------GLINLVKLDLERCTRIH-GGLVNLK-GLMKLESLNIKWCNCITD 170
L +L KLDL C I GL L G KL+ + +K C I+D
Sbjct: 125 LRCCNSLGDLELAAVCQLGSLRKLDLTGCYMISDAGLGCLAAGCKKLQVVVLKGCVGISD 184
Query: 171 SDMKPL-SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALG 228
+ + L S L ++ +S +++TD G+ L L L +LNL C V A L S
Sbjct: 185 AGLCFLASNCKELTTIDVSYTEITDDGVRCLSNLPSLRVLNLAACSNVGDAGLTRTST-- 242
Query: 229 SLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGF-------NEITDECLVHLKGLTNLES 280
SL L+L+ C+ +++ G SK SL+ L LGF ++IT + L + LT +++
Sbjct: 243 SLLELDLSCCRSVTNVGISFLSK-RSLQFLKLGFCSPVKKRSQITGQLLEAVGKLTQIQT 301
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
L L C I +GL G C CL+LSD + SG+ ++ F G +
Sbjct: 302 LKLAGCEIAGDGL-RFVGSC---CLQLSDLSLSKCRGVTDSGMASI------FHGCKN-- 349
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI-TDSGAAYLRNFKNLR 399
LRKL + LD +IT +A S GL L + RI T++ L
Sbjct: 350 LRKLD-----LTCCLDLTEITAYNIA--RSSAGLVSLKIEACRILTENNIPLL------- 395
Query: 400 SLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
+E C + L L+V++ I AGL + K L++L L CKV+ N I+ +
Sbjct: 396 -MERC---------SCLEELDVTDCNIDDAGLECIAKCKFLKTLKLGFCKVSDNGIEHV- 444
Query: 460 SRDLPNLVSF 469
R+ +L+
Sbjct: 445 GRNCSDLIEL 454
>gi|130774809|gb|ABO32417.1| InlA [Listeria monocytogenes]
Length = 800
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|290993148|ref|XP_002679195.1| predicted protein [Naegleria gruberi]
gi|284092811|gb|EFC46451.1| predicted protein [Naegleria gruberi]
Length = 311
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 87/165 (52%)
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
S++ L L++ NEI + H+ + L SLN+ + IGDEG ++ + L L++S
Sbjct: 127 SEMKQLTSLDVSDNEIGNVGAKHISEMKQLTSLNICNNRIGDEGAKFISEMQQLTLLDIS 186
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
D +G G++ +S + L S N+S I + + ++ + L SL++ I D+G+ +
Sbjct: 187 DNHIGDKGVKFISEMKQLTSFNISDDLIGNVGAKSISEMQQLTSLDVSDNHIGDSGVKFI 246
Query: 369 TSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL 413
+ + LT L++ R+ D GA + K LRSL I L D G+
Sbjct: 247 SEMKQLTSLNIAINRVGDEGAKLISEMKQLRSLNISDNELGDEGV 291
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 256 VLNLGFNEITDECLVHLKGLTNLE---SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQV 312
++N+ FNE+ E ++K ++ ++ SL++ IG+ G +++ + L L + + ++
Sbjct: 107 IVNVKFNEMLLELRENIKFISEMKQLTSLDVSDNEIGNVGAKHISEMKQLTSLNICNNRI 166
Query: 313 GSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT 372
G G + +S + L +++S I D ++ ++ + L S N+ I + G +++ +
Sbjct: 167 GDEGAKFISEMQQLTLLDISDNHIGDKGVKFISEMKQLTSFNISDDLIGNVGAKSISEMQ 226
Query: 373 GLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRI 426
LT LD+ I DSG ++ K L SL I + D G + L SLN+S++ +
Sbjct: 227 QLTSLDVSDNHIGDSGVKFISEMKQLTSLNIAINRVGDEGAKLISEMKQLRSLNISDNEL 286
Query: 427 TSAGLRHLKPLKNLRS 442
G++ + +K LRS
Sbjct: 287 GDEGVKFISEMKQLRS 302
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 94/180 (52%)
Query: 195 SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSL 254
I ++ +++LT L++ + +S + L LN+ ++ D+G + S++ L
Sbjct: 121 ENIKFISEMKQLTSLDVSDNEIGNVGAKHISEMKQLTSLNICNNRIGDEGAKFISEMQQL 180
Query: 255 KVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS 314
+L++ N I D+ + + + L S N+ IG+ G +++ + L L++SD +G
Sbjct: 181 TLLDISDNHIGDKGVKFISEMKQLTSFNISDDLIGNVGAKSISEMQQLTSLDVSDNHIGD 240
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 374
SG++ +S + L S+N++ + D + ++ + L+SLN+ ++ D G+ ++ + L
Sbjct: 241 SGVKFISEMKQLTSLNIAINRVGDEGAKLISEMKQLRSLNISDNELGDEGVKFISEMKQL 300
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 89/177 (50%)
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
+S + L L+++ ++ + G + S++ L LN+ N I DE + + L L++
Sbjct: 126 ISEMKQLTSLDVSDNEIGNVGAKHISEMKQLTSLNICNNRIGDEGAKFISEMQQLTLLDI 185
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
IGD+G+ ++ + L +SD +G+ G + +S + L S+++S I D ++
Sbjct: 186 SDNHIGDKGVKFISEMKQLTSFNISDDLIGNVGAKSISEMQQLTSLDVSDNHIGDSGVKF 245
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRS 400
++ + L SLN+ ++ D G ++ + L L++ + D G ++ K LRS
Sbjct: 246 ISEMKQLTSLNIAINRVGDEGAKLISEMKQLRSLNISDNELGDEGVKFISEMKQLRS 302
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 80/155 (51%)
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K +S + L SL I +++ D G ++ +Q+LTLL++ + + +S + L
Sbjct: 148 KHISEMKQLTSLNICNNRIGDEGAKFISEMQQLTLLDISDNHIGDKGVKFISEMKQLTSF 207
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
N++ + + G + S++ L L++ N I D + + + L SLN+ +GDEG
Sbjct: 208 NISDDLIGNVGAKSISEMQQLTSLDVSDNHIGDSGVKFISEMKQLTSLNIAINRVGDEGA 267
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
++ + L+ L +SD ++G G++ +S + L S
Sbjct: 268 KLISEMKQLRSLNISDNELGDEGVKFISEMKQLRS 302
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
+I + G +H+ + LTSL+ NN I +G K + + L LD+ G+ +
Sbjct: 141 EIGNVGAKHISEMKQLTSLNIC-NNRIGDEGAKFISEMQQLTLLDISDNHIGDKGVKFIS 199
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
+ +L S NI + I + K +S + L SL +S + + DSG+ ++ +++LT LN+
Sbjct: 200 EMKQLTSFNIS-DDLIGNVGAKSISEMQQLTSLDVSDNHIGDSGVKFISEMKQLTSLNIA 258
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 255
V +S + L LN++ +L D+G + S++ L+
Sbjct: 259 INRVGDEGAKLISEMKQLRSLNISDNELGDEGVKFISEMKQLR 301
>gi|16802477|ref|NP_463962.1| internalin A [Listeria monocytogenes EGD-e]
gi|386049359|ref|YP_005967350.1| internalin-A [Listeria monocytogenes FSL R2-561]
gi|404282867|ref|YP_006683764.1| internalin A [Listeria monocytogenes SLCC2372]
gi|403399437|sp|P0DJM0.1|INLA_LISMO RecName: Full=Internalin-A; Flags: Precursor
gi|12054782|emb|CAC20628.1| internalin A [Listeria monocytogenes]
gi|16409810|emb|CAC98512.1| Internalin A [Listeria monocytogenes EGD-e]
gi|130774817|gb|ABO32421.1| InlA [Listeria monocytogenes]
gi|130774821|gb|ABO32423.1| InlA [Listeria monocytogenes]
gi|130774823|gb|ABO32424.1| InlA [Listeria monocytogenes]
gi|150371782|dbj|BAF65680.1| internalin A [Listeria monocytogenes]
gi|150371794|dbj|BAF65686.1| internalin A [Listeria monocytogenes]
gi|150371804|dbj|BAF65691.1| internalin A [Listeria monocytogenes]
gi|150371820|dbj|BAF65699.1| internalin A [Listeria monocytogenes]
gi|150371846|dbj|BAF65712.1| internalin A [Listeria monocytogenes]
gi|150371852|dbj|BAF65715.1| internalin A [Listeria monocytogenes]
gi|150371856|dbj|BAF65717.1| internalin A [Listeria monocytogenes]
gi|150371860|dbj|BAF65719.1| internalin A [Listeria monocytogenes]
gi|150371868|dbj|BAF65723.1| internalin A [Listeria monocytogenes]
gi|167861980|gb|ACA05689.1| InlA [Listeria monocytogenes]
gi|194239382|emb|CAQ76831.1| internalin A [Listeria monocytogenes]
gi|298359818|gb|ADI77488.1| internalin A [Listeria monocytogenes]
gi|298359832|gb|ADI77495.1| internalin A [Listeria monocytogenes]
gi|298360054|gb|ADI77606.1| internalin A [Listeria monocytogenes]
gi|298360128|gb|ADI77643.1| internalin A [Listeria monocytogenes]
gi|298360212|gb|ADI77685.1| internalin A [Listeria monocytogenes]
gi|298360216|gb|ADI77687.1| internalin A [Listeria monocytogenes]
gi|298360256|gb|ADI77707.1| internalin A [Listeria monocytogenes]
gi|298360522|gb|ADI77840.1| internalin A [Listeria monocytogenes]
gi|346423205|gb|AEO24730.1| internalin-A [Listeria monocytogenes FSL R2-561]
gi|404232369|emb|CBY53772.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2372]
Length = 800
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|71748370|ref|XP_823240.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832908|gb|EAN78412.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 846
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 205/457 (44%), Gaps = 92/457 (20%)
Query: 27 AFRDC-ALQDLCLGQYPGVND-KWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQ 84
+F C LQ L L V+D +W+ + + L ++DLS ++V L L+ C L
Sbjct: 364 SFVHCRQLQQLKLSCCRRVSDVRWLAAL----TCLRTLDLSHTNVRSRWLESLRACRYLV 419
Query: 85 SLDFNFC---IQIS----------------DGGLEHLRGLSNLTSLSFRR-NNAITAQGM 124
L+ +C +++S D G ++L + L+F + + + +
Sbjct: 420 ELNVAYCRDVVEVSFLSELRLLKHLDLSGTDIGEQNLDPIGRCEGLTFLLLKDCSSVKDL 479
Query: 125 KAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
L LVKLD ER + + + KLE L+ ++C+ +TD +K L GL NLK+
Sbjct: 480 HFLETLRELVKLDTERTGIMDANVCQVVACKKLEFLSFRYCHLLTD--VKCLEGLRNLKT 537
Query: 185 LQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
L ++ + VT+ GI+ SL SL Y++++ C L
Sbjct: 538 LDLAGTNVTNEGIS------------------------SLPKCVSLEYVDVSECCL---- 569
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
+ +L F L+ L NL+ + D + D G LTG +L+
Sbjct: 570 -----------ITHLEF----------LRPLPNLQQVVADQMNLTDIG--GLTGAPSLRR 606
Query: 305 LELSDTQ-VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL-NLDARQI-T 361
+ L++++ +G+ G L L+ ++L + IS+ +R L L+S +SL +LD + +
Sbjct: 607 VTLNESKRLGTVGEVRLP---YLQELSLRKSTISNAGIRSL--LASCRSLQHLDMQHCHS 661
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG-GGLTD----AGLTGL 416
T L+AL+ L L L L R+T ++ + NLR L++ +TD + L L
Sbjct: 662 VTELSALSQLPNLRELLLRNIRVTGEFMTHIASCVNLRKLQMTECADITDVNCLSALQSL 721
Query: 417 VSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAN 453
+++S + +T+ G++ L LR L L C+ N
Sbjct: 722 EDIDLSRTSVTTEGIKGLSKCYALRKLNLSECRYVTN 758
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 192/431 (44%), Gaps = 52/431 (12%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQ----------------------ISDGGLEHLRGLS 106
+TD GL + C +LQ + + C++ I + G++ LR L
Sbjct: 263 ITDEGLPPISKCFSLQYVMLDNCMKLRSLNCLGSLRNLRTLIVSRNRIPEEGVQGLRKLR 322
Query: 107 NLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCN 166
+L L F N TA ++ + L +LV+LDL G + +L+ L + C
Sbjct: 323 DLEVLRFSVFNRPTA--VEFISSLGSLVELDLRDNWVGDAGCASFVHCRQLQQLKLSCCR 380
Query: 167 CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA 226
+ SD++ L+ LT L++L +S + V + L+ + L LN+ C + LS
Sbjct: 381 RV--SDVRWLAALTCLRTLDLSHTNVRSRWLESLRACRYLVELNVAYCRDVVE-VSFLSE 437
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG-FNEITDECLVHLKGLTNLESLNLDS 285
L L +L+L+ + + + + L L L + + D L L+ L L L+ +
Sbjct: 438 LRLLKHLDLSGTDIGEQNLDPIGRCEGLTFLLLKDCSSVKD--LHFLETLRELVKLDTER 495
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
GI D + + L+ L + + ++ L GL NL++++L+ T +++
Sbjct: 496 TGIMDANVCQVVACKKLEFLSFRYCHL-LTDVKCLEGLRNLKTLDLAGTNVTN------E 548
Query: 346 GLSSL-KSLNLDARQITD----TGLAALTSLTGLTHLDLFGARITD----SGAAYLRNFK 396
G+SSL K ++L+ +++ T L L L L + +TD +GA LR
Sbjct: 549 GISSLPKCVSLEYVDVSECCLITHLEFLRPLPNLQQVVADQMNLTDIGGLTGAPSLRRVT 608
Query: 397 NLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRH-LKPLKNLRSLTLESCKVTANDI 455
S + G + + L L L++ S I++AG+R L ++L+ L ++ C + ++
Sbjct: 609 LNESKRL--GTVGEVRLPYLQELSLRKSTISNAGIRSLLASCRSLQHLDMQHCH-SVTEL 665
Query: 456 KRLQSRDLPNL 466
L LPNL
Sbjct: 666 SALS--QLPNL 674
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 185/431 (42%), Gaps = 81/431 (18%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L S+ L + +++ + + +C+NL+ + + C + LE L LT LS N
Sbjct: 206 LRSLTLFATPLSNQIMSYFCECTNLERVVVDSCCGLV--SLECFAALQRLTHLSVL-NCT 262
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
IT +G+ + +L + L+ C MKL SLN L
Sbjct: 263 ITDEGLPPISKCFSLQYVMLDNC-------------MKLRSLNC-------------LGS 296
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
L NL++L +S +++ + G+ L+ L+ L +L A ++ +S+LGSL L+L
Sbjct: 297 LRNLRTLIVSRNRIPEEGVQGLRKLRDLEVLRFSVFNRPTA-VEFISSLGSLVELDLRDN 355
Query: 239 QLSDDGCEKF-----------------------SKIGSLKVLNLGFNEITDECLVHLKGL 275
+ D GC F + + L+ L+L + L L+
Sbjct: 356 WVGDAGCASFVHCRQLQQLKLSCCRRVSDVRWLAALTCLRTLDLSHTNVRSRWLESLRAC 415
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI----NL 331
L LN+ C E + L+ L LK L+LS T +G NL+ I L
Sbjct: 416 RYLVELNVAYCRDVVE-VSFLSELRLLKHLDLSGTDIGEQ---------NLDPIGRCEGL 465
Query: 332 SFTGISD-GSLRKLAGLSSLKSL-NLDARQ--ITDTGLAALTSLTGLTHLDL-FGARITD 386
+F + D S++ L L +L+ L LD + I D + + + L L + +TD
Sbjct: 466 TFLLLKDCSSVKDLHFLETLRELVKLDTERTGIMDANVCQVVACKKLEFLSFRYCHLLTD 525
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGL---VSL---NVSNSRITSAGLRHLKPLKNL 440
L +NL++L++ G +T+ G++ L VSL +VS + + L L+PL NL
Sbjct: 526 VKC--LEGLRNLKTLDLAGTNVTNEGISSLPKCVSLEYVDVSECCLIT-HLEFLRPLPNL 582
Query: 441 RSLTLESCKVT 451
+ + + +T
Sbjct: 583 QQVVADQMNLT 593
>gi|371942126|gb|AEX60875.1| internaline [Listeria monocytogenes]
Length = 790
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|38154344|gb|AAR12159.1| internalin A [Listeria monocytogenes]
Length = 685
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 42 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 95
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 96 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 147
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 148 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 200
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 201 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 254
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 255 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 312
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 313 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 370
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 371 NVSIPNTVKNVTGALIAPATISDGG 395
>gi|22347568|gb|AAM95929.1| internalin A precursor [Listeria monocytogenes]
Length = 743
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 42 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 95
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 96 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 147
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +K++D + L KLT NLE T + ++ LG +L L
Sbjct: 148 ANLTTLERLDISSNKLSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 200
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 201 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 254
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 255 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 312
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 313 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKV 370
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 371 NVSIPNTVKNVTGALIAPATISDGG 395
>gi|29423725|gb|AAO73556.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 41 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 94
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 95 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 146
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +K++D + L KLT NLE T + ++ LG +L L
Sbjct: 147 ANLTTLERLDISSNKLSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 199
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 200 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 253
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 254 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 311
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 312 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKV 369
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 370 NVSIPNTVKNVTGALIAPATISDGG 394
>gi|51850106|dbj|BAD42394.1| leucine-rich repeat protein [Ralstonia solanacearum]
Length = 462
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 123/299 (41%), Gaps = 55/299 (18%)
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
+T +GIA L L L L++ GC + A L++ +L LN++R + DDG +
Sbjct: 155 PITSAGIARLLAL-PLERLDVSGCGLDAESARLLASHPTLTVLNISRNAIGDDGAAALAA 213
Query: 251 IGSLKVLNLGFNEITD---ECLVHLKGLTNLE---------------------SLNLDSC 286
L LN+G N I+D LV GLT L+ L+ C
Sbjct: 214 NPKLTSLNVGRNGISDAGARALVACAGLTKLDISDNRIGDAGARALAGSAKLNKLDAGDC 273
Query: 287 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN---------------- 330
GIG EG L L L+L ++G G L+ L S+N
Sbjct: 274 GIGPEGARALAASQTLTRLDLRYNEIGVGGAEALAANPRLTSLNVCGNALGSAGAALLAA 333
Query: 331 --------LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
+ GI + R L ++L LN+ I + G AL + T LT LD+
Sbjct: 334 SAALTELDIGNNGIGNAGARALGANATLVKLNVANNGIEEAGARALAASTTLTALDIGSN 393
Query: 383 RITDSGAAYLRNFKNLRSLEICGGGLTDAGL------TGLVSLNVSNSRITSAGLRHLK 435
RI D+GA L L +L+ + D G T L +LNV +RI AG+R L+
Sbjct: 394 RIGDAGAQALAANDTLVTLDASANWIGDPGALALADNTRLATLNVGANRIGEAGMRALE 452
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 1/233 (0%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 215
KL SLN+ N I+D+ + L L L IS +++ D+G L G KL L+ C
Sbjct: 216 KLTSLNVG-RNGISDAGARALVACAGLTKLDISDNRIGDAGARALAGSAKLNKLDAGDCG 274
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
+ +L+A +L L+L ++ G E + L LN+ N + L
Sbjct: 275 IGPEGARALAASQTLTRLDLRYNEIGVGGAEALAANPRLTSLNVCGNALGSAGAALLAAS 334
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 335
L L++ + GIG+ G L L L +++ + +G R L+ T L ++++
Sbjct: 335 AALTELDIGNNGIGNAGARALGANATLVKLNVANNGIEEAGARALAASTTLTALDIGSNR 394
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG 388
I D + LA +L +L+ A I D G AL T L L++ RI ++G
Sbjct: 395 IGDAGAQALAANDTLVTLDASANWIGDPGALALADNTRLATLNVGANRIGEAG 447
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 98/251 (39%), Gaps = 29/251 (11%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+ L +D+S + + D+G L + L LD C
Sbjct: 239 AGLTKLDISDNRIGDAGARALAGSAKLNKLDAGDC------------------------- 273
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC-NCITDSDMKP 175
I +G +A A L +LDL GG L +L SLN+ C N + +
Sbjct: 274 -GIGPEGARALAASQTLTRLDLRYNEIGVGGAEALAANPRLTSLNV--CGNALGSAGAAL 330
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L+ L L I + + ++G L L LN+ + A +L+A +L L++
Sbjct: 331 LAASAALTELDIGNNGIGNAGARALGANATLVKLNVANNGIEEAGARALAASTTLTALDI 390
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
++ D G + + +L L+ N I D + L T L +LN+ + IG+ G+
Sbjct: 391 GSNRIGDAGAQALAANDTLVTLDASANWIGDPGALALADNTRLATLNVGANRIGEAGMRA 450
Query: 296 LTGLCNLKCLE 306
L L L+
Sbjct: 451 LEASTTLAVLK 461
>gi|255025517|ref|ZP_05297503.1| internalin A [Listeria monocytogenes FSL J2-003]
Length = 744
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|371942074|gb|AEX60849.1| internaline [Listeria monocytogenes]
gi|371942102|gb|AEX60863.1| internaline [Listeria monocytogenes]
gi|371942114|gb|AEX60869.1| internaline [Listeria monocytogenes]
gi|371942124|gb|AEX60874.1| internaline [Listeria monocytogenes]
Length = 790
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|290984031|ref|XP_002674731.1| predicted protein [Naegleria gruberi]
gi|284088323|gb|EFC41987.1| predicted protein [Naegleria gruberi]
Length = 356
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 123/279 (44%), Gaps = 21/279 (7%)
Query: 173 MKPLSGLTNLKSLQISCSK-VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
MK L+ L I C+ + + G Y+ L++LT L + + +S L L
Sbjct: 97 MKSLTEL-------IGCNNNIGNEGAKYISKLKQLTHLYILNNEIDDEGAKYISELNQLV 149
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
L+++ + +G + S++ L L++ N I E H+ + L LN+ + IG E
Sbjct: 150 SLDISYNNIGVEGAKYISELKQLTNLDISVNHIGAEGAQHIAEMNQLTILNISTNNIGYE 209
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
G + L L CL + + + G +++S + L +N+S+ I + ++ L L
Sbjct: 210 GAKYIGKLKQLTCLTIFNNNIDVEGAKYISEMKQLTDLNISYNNIDVEGAKYISELKQLT 269
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
L++ QI G+ + + LT L I D GA Y+ K L +L+I +++
Sbjct: 270 DLDISINQIGAKGVQYIAEMNQLTILSASHNNIGDEGAKYISEMKQLTNLDISNNSISNE 329
Query: 412 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
G+ + ++HL L N+R + S K+
Sbjct: 330 GVKCI------------EEMKHLTVL-NIRQPVMFSFKI 355
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 109/229 (47%), Gaps = 4/229 (1%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
LK L L LN N I D K +S L L SL IS + + G Y+ L++LT L+
Sbjct: 121 LKQLTHLYILN----NEIDDEGAKYISELNQLVSLDISYNNIGVEGAKYISELKQLTNLD 176
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
+ + A ++ + L LN++ + +G + K+ L L + N I E
Sbjct: 177 ISVNHIGAEGAQHIAEMNQLTILNISTNNIGYEGAKYIGKLKQLTCLTIFNNNIDVEGAK 236
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
++ + L LN+ I EG ++ L L L++S Q+G+ G+++++ + L ++
Sbjct: 237 YISEMKQLTDLNISYNNIDVEGAKYISELKQLTDLDISINQIGAKGVQYIAEMNQLTILS 296
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
S I D + ++ + L +L++ I++ G+ + + LT L++
Sbjct: 297 ASHNNIGDEGAKYISEMKQLTNLDISNNSISNEGVKCIEEMKHLTVLNI 345
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 6/223 (2%)
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
+ ++G + SK+ L L + NEI DE ++ L L SL++ IG EG ++ L
Sbjct: 110 IGNEGAKYISKLKQLTHLYILNNEIDDEGAKYISELNQLVSLDISYNNIGVEGAKYISEL 169
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 359
L L++S +G+ G +H++ + L +N+S I + + L L L +
Sbjct: 170 KQLTNLDISVNHIGAEGAQHIAEMNQLTILNISTNNIGYEGAKYIGKLKQLTCLTIFNNN 229
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSL 419
I G ++ + LT L++ I GA Y+ K L L+I + G+ + +
Sbjct: 230 IDVEGAKYISEMKQLTDLNISYNNIDVEGAKYISELKQLTDLDISINQIGAKGVQYIAEM 289
Query: 420 N------VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIK 456
N S++ I G +++ +K L +L + + ++ +K
Sbjct: 290 NQLTILSASHNNIGDEGAKYISEMKQLTNLDISNNSISNEGVK 332
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 26/262 (9%)
Query: 94 ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG 153
I + G +++ L LT L + NN I +G K + L LV LD+
Sbjct: 110 IGNEGAKYISKLKQLTHL-YILNNEIDDEGAKYISELNQLVSLDISY------------- 155
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
N I K +S L L +L IS + + G ++ + +LT+LN+
Sbjct: 156 ------------NNIGVEGAKYISELKQLTNLDISVNHIGAEGAQHIAEMNQLTILNIST 203
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
+ + L L L + + +G + S++ L LN+ +N I E ++
Sbjct: 204 NNIGYEGAKYIGKLKQLTCLTIFNNNIDVEGAKYISEMKQLTDLNISYNNIDVEGAKYIS 263
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
L L L++ IG +G+ + + L L S +G G +++S + L ++++S
Sbjct: 264 ELKQLTDLDISINQIGAKGVQYIAEMNQLTILSASHNNIGDEGAKYISEMKQLTNLDISN 323
Query: 334 TGISDGSLRKLAGLSSLKSLNL 355
IS+ ++ + + L LN+
Sbjct: 324 NSISNEGVKCIEEMKHLTVLNI 345
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ + L+S+D+S +++ G ++ + L +LD + I G +H+ ++ LT L+
Sbjct: 143 SELNQLVSLDISYNNIGVEGAKYISELKQLTNLDISVN-HIGAEGAQHIAEMNQLTILNI 201
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG------LMKLESLNIKWCNC 167
NN I +G K L L C I ++++G + +L LNI + N
Sbjct: 202 STNN-IGYEGAKYIGKLKQLT------CLTIFNNNIDVEGAKYISEMKQLTDLNISY-NN 253
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
I K +S L L L IS +++ G+ Y+ + +LT+L+ + +S +
Sbjct: 254 IDVEGAKYISELKQLTDLDISINQIGAKGVQYIAEMNQLTILSASHNNIGDEGAKYISEM 313
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
L L+++ +S++G + ++ L VLN+
Sbjct: 314 KQLTNLDISNNSISNEGVKCIEEMKHLTVLNI 345
>gi|148607482|gb|ABQ95519.1| InlA [Listeria monocytogenes]
Length = 800
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|148607492|gb|ABQ95522.1| InlA [Listeria monocytogenes]
Length = 800
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|4972088|emb|CAB43884.1| putative protein [Arabidopsis thaliana]
gi|7269233|emb|CAB81302.1| putative protein [Arabidopsis thaliana]
Length = 364
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 125/291 (42%), Gaps = 73/291 (25%)
Query: 215 PVTAACLDSLSAL---GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH 271
P T + L SL L G+ F ++ C + + + N F
Sbjct: 10 PKTHSSLASLKKLVLSGANFSAETESLSFTNKSCITYLDVSKTSLKNFSF---------- 59
Query: 272 LKGLTNLESLNLDSCGIGDE--GLVNLTGLCNLKCLELSDTQVGSSGLRHLSG-LTNLES 328
L+ + NLE L+L S GD+ G V G NLK L +SDTQ+ SG+ +L+G + LE+
Sbjct: 60 LETMFNLEHLDLSSTAFGDDSVGFVACVG-ENLKNLNVSDTQITPSGVGNLAGHVPQLET 118
Query: 329 INLSFTGISD-------------------------------------GSLRKLAGLSSLK 351
+++S T + D SL L L+SL+
Sbjct: 119 LSMSQTFVDDLSILLISTTMPCIKALDLGMNSTLGFYYLISPQEEKEKSLAALQSLTSLE 178
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
+L+L+ + D L+ L+SLTGLTHL L +TDS +L + N
Sbjct: 179 TLSLEHPYLGDKALSGLSSLTGLTHLSLTSTSLTDSTLHHLSSLPN-------------- 224
Query: 412 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK-VTANDIKRLQSR 461
LVSL V + +TS GL +P LR+L L+ C +T +DI L R
Sbjct: 225 ----LVSLGVRDGVLTSNGLEKFRPPNRLRTLDLQGCWLLTKDDIAGLCKR 271
>gi|223698619|gb|ACN18986.1| truncated internalin A [Listeria monocytogenes]
gi|223698691|gb|ACN19034.1| truncated internalin A [Listeria monocytogenes]
gi|223698706|gb|ACN19044.1| truncated internalin A [Listeria monocytogenes]
gi|223698715|gb|ACN19050.1| truncated internalin A [Listeria monocytogenes]
gi|223698781|gb|ACN19094.1| truncated internalin A [Listeria monocytogenes]
gi|223698784|gb|ACN19096.1| truncated internalin A [Listeria monocytogenes]
gi|223698814|gb|ACN19116.1| truncated internalin A [Listeria monocytogenes]
gi|223698838|gb|ACN19132.1| truncated internalin A [Listeria monocytogenes]
gi|223698844|gb|ACN19136.1| truncated internalin A [Listeria monocytogenes]
gi|223698850|gb|ACN19140.1| truncated internalin A [Listeria monocytogenes]
gi|223698856|gb|ACN19144.1| truncated internalin A [Listeria monocytogenes]
gi|223698880|gb|ACN19160.1| truncated internalin A [Listeria monocytogenes]
gi|223698958|gb|ACN19212.1| truncated internalin A [Listeria monocytogenes]
gi|223698967|gb|ACN19218.1| truncated internalin A [Listeria monocytogenes]
gi|223698970|gb|ACN19220.1| truncated internalin A [Listeria monocytogenes]
gi|223698973|gb|ACN19222.1| truncated internalin A [Listeria monocytogenes]
gi|223698982|gb|ACN19228.1| truncated internalin A [Listeria monocytogenes]
Length = 614
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|194239392|emb|CAQ76836.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|345310405|ref|XP_001520129.2| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Ornithorhynchus anatinus]
Length = 604
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 164/390 (42%), Gaps = 40/390 (10%)
Query: 101 HLRGLS--------NLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
LRGL+ NL SLS N +G AFAGL L +L+L T +
Sbjct: 130 QLRGLAPGTFLHTPNLASLSLANNRLGQLEG-AAFAGLCQLGELNLGWNTLAVLPDAVFR 188
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
GL L L + N + +GL L+ L +S + + GL +L L L
Sbjct: 189 GLPHLRELVLA-GNRLAYLQPPLFAGLGELQELDLSTNSLRSVKAHVFAGLPRLQKLFLR 247
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
G ++A + L +L +L+L+ +L+ + F + SL VL L N IT
Sbjct: 248 GNQLSAVAPRAFLGLRALRWLDLSHNRLAVLFEDTFLGLPSLHVLRLSANVITSLRPQAF 307
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
+ L +LE L L +G GL L+ L L+D + G +GL L +NLS
Sbjct: 308 RDLPHLEELQLAHNRLGALAAGAFEGLARLEVLALNDNHIREIGPGAFAGLARLAVVNLS 367
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDA-----------------RQIT--DTGLAA-----L 368
++ + GL++L SL+L+ R+++ G+ A L
Sbjct: 368 GNCLAALPAQTFRGLAALHSLHLERACLGRVPAGAFAGLVALRRLSLGHNGITAIEEQGL 427
Query: 369 TSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS------LNVS 422
LTGL LDL G R+T R+ L L + G L D L+ L+++
Sbjct: 428 HDLTGLLELDLTGNRLTHLPTRAFRDLARLEYLLLAGNQLADLAPEALLPLRRLSWLDLA 487
Query: 423 NSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
++R+ + PL +LR L+L + + A
Sbjct: 488 HNRLGAVAAGLFAPLASLRFLSLRNNSLRA 517
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 107/294 (36%), Gaps = 15/294 (5%)
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
C C D D + L + CS S Q L L+G +TA +
Sbjct: 41 CACSYDDDYG--------EELSVFCSARNLSSPPEGVPCQARALW-LDGNNLTALPAAAF 91
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
L L +LNL +L + F + L L+L N++ NL SL+L
Sbjct: 92 GNLSGLDFLNLQGSRLGQLEAQAFRGLARLAHLHLERNQLRGLAPGTFLHTPNLASLSLA 151
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
+ +G GLC L L L + GL +L + L+ ++
Sbjct: 152 NNRLGQLEGAAFAGLCQLGELNLGWNTLAVLPDAVFRGLPHLRELVLAGNRLAYLQPPLF 211
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
AGL L+ L+L + L L L L G +++ + LR L++
Sbjct: 212 AGLGELQELDLSTNSLRSVKAHVFAGLPRLQKLFLRGNQLSAVAPRAFLGLRALRWLDLS 271
Query: 405 GGGL------TDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
L T GL L L +S + ITS + + L +L L L ++ A
Sbjct: 272 HNRLAVLFEDTFLGLPSLHVLRLSANVITSLRPQAFRDLPHLEELQLAHNRLGA 325
>gi|371942084|gb|AEX60854.1| internaline [Listeria monocytogenes]
Length = 790
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|290997259|ref|XP_002681199.1| predicted protein [Naegleria gruberi]
gi|284094822|gb|EFC48455.1| predicted protein [Naegleria gruberi]
Length = 449
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 129/277 (46%), Gaps = 25/277 (9%)
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K +S + L L I CSK + I + L LT LN C +++ L L L L L
Sbjct: 155 KSISTFSQLTKLNIQCSKNINMIITSVGSLSNLTYLNASQCNISSVNLKFLQ-LFKLTKL 213
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+L++ + DG + + + +LK LNL IT++C+ HL LT L LN+ IG+EGL
Sbjct: 214 DLSKNNIGGDGMKVIALLTNLKYLNLQDCNITNDCITHLTSLTKLVHLNVGDNYIGNEGL 273
Query: 294 VNLTGLCNLKCLELSD-----------------TQVGSSGLRHLSGLTNLESINLSFTGI 336
++ L NL L + ++ G+ HL+ L NL ++ S I
Sbjct: 274 FLISSLRNLTYLSVERGTGRRFNERQVDIANQGMEINHQGIAHLTNLHNLRHLDFSGKPI 333
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
D + + L+S++ LN+ +R + +L L +L++ G I D GA L
Sbjct: 334 CDKGIEFIGKLNSIEILNV-SRCNCSGDIESLQKSPHLINLNIVGNPIGDKGAEILSRM- 391
Query: 397 NLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRH 433
L L G++ G V L + NS+I +A L++
Sbjct: 392 TLEELNARNCGISYDG----VKL-IGNSKIKTAFLQN 423
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 110/240 (45%), Gaps = 24/240 (10%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLER 140
SNL L+ + C IS L+ L+ L LT L +NN I GMK A L NL L+L+
Sbjct: 185 SNLTYLNASQC-NISSVNLKFLQ-LFKLTKLDLSKNN-IGGDGMKVIALLTNLKYLNLQD 241
Query: 141 CTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCS---------- 190
C + + +L L KL LN+ N I + + +S L NL L +
Sbjct: 242 CNITNDCITHLTSLTKLVHLNV-GDNYIGNEGLFLISSLRNLTYLSVERGTGRRFNERQV 300
Query: 191 -------KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
++ GIA+L L L L+ G P+ ++ + L S+ LN++RC S D
Sbjct: 301 DIANQGMEINHQGIAHLTNLHNLRHLDFSGKPICDKGIEFIGKLNSIEILNVSRCNCSGD 360
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
E K L LN+ N I D+ L +T LE LN +CGI +G V L G +K
Sbjct: 361 -IESLQKSPHLINLNIVGNPIGDKGAEILSRMT-LEELNARNCGISYDG-VKLIGNSKIK 417
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 110/260 (42%), Gaps = 35/260 (13%)
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNR-CQLSDDGCEKFSKIGSLKVLNLGFNEIT-D 266
+ L CP T L +L L +L L L R LS + I SLKV FN +
Sbjct: 22 IQLSQCP-TVDELKALRHLSALKELTLLRELPLSYGSIYYLNNITSLKV---RFNTVVLI 77
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE-----LSDTQVGSSGLRHLS 321
+ HLK L LE+ N + D + + +C LK LE + ++ LS
Sbjct: 78 PRMNHLKHLEILENPN-EKSQFTD---IRVGTICKLKNLESFVVRFPNPRLPPEYFEKLS 133
Query: 322 GLTNLESINLSFTGISDGSLRK-LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
L+ L + +S +D K ++ S L LN+ + + + ++ SL+ LT+L+
Sbjct: 134 VLSKLTELEISTDSSNDWEKAKSISTFSQLTKLNIQCSKNINMIITSVGSLSNLTYLNAS 193
Query: 381 GARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNL 440
I+ +L+ FK L L++S + I G++ + L NL
Sbjct: 194 QCNISSVNLKFLQLFK-------------------LTKLDLSKNNIGGDGMKVIALLTNL 234
Query: 441 RSLTLESCKVTANDIKRLQS 460
+ L L+ C +T + I L S
Sbjct: 235 KYLNLQDCNITNDCITHLTS 254
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 29/279 (10%)
Query: 185 LQIS-CSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN-LNRCQLS 241
+Q+S C V + + +L L++LTLL P+ + GS++YLN + ++
Sbjct: 22 IQLSQCPTVDELKALRHLSALKELTLL--RELPL---------SYGSIYYLNNITSLKVR 70
Query: 242 DDGCEKFSKIGSLKVLNLGFN-----EITDECLVHLKGLTNLES--LNLDSCGIGDEGLV 294
+ ++ LK L + N + TD + + L NLES + + + E
Sbjct: 71 FNTVVLIPRMNHLKHLEILENPNEKSQFTDIRVGTICKLKNLESFVVRFPNPRLPPEYFE 130
Query: 295 NLTGLCNLKCLELS-DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
L+ L L LE+S D+ + +S + L +N+ + + + + LS+L L
Sbjct: 131 KLSVLSKLTELEISTDSSNDWEKAKSISTFSQLTKLNIQCSKNINMIITSVGSLSNLTYL 190
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD--- 410
N I+ L L L LT LDL I G + NL+ L + +T+
Sbjct: 191 NASQCNISSVNLKFL-QLFKLTKLDLSKNNIGGDGMKVIALLTNLKYLNLQDCNITNDCI 249
Query: 411 ---AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
LT LV LNV ++ I + GL + L+NL L++E
Sbjct: 250 THLTSLTKLVHLNVGDNYIGNEGLFLISSLRNLTYLSVE 288
>gi|371942096|gb|AEX60860.1| internaline [Listeria monocytogenes]
Length = 790
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|56797877|emb|CAH04900.1| internalin A [Listeria monocytogenes]
Length = 792
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 179/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L SNLT L+ N
Sbjct: 90 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANSSNLTGLTLF-N 143
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 144 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 195
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 196 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 248
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 249 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 302
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 303 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 360
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 361 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 418
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 419 NVSIPNTVKNVTGALIAPATISDGG 443
>gi|371942132|gb|AEX60878.1| internaline [Listeria monocytogenes]
Length = 790
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGDNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|149279200|ref|ZP_01885332.1| hypothetical protein PBAL39_12805 [Pedobacter sp. BAL39]
gi|149229962|gb|EDM35349.1| hypothetical protein PBAL39_12805 [Pedobacter sp. BAL39]
Length = 1105
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 170/422 (40%), Gaps = 63/422 (14%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCS-NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++ +++S SD+ GL C+ NLQ L +F + + D LE RG +L L+ RN
Sbjct: 605 QIVQIEISRSDLEGHGLAFFSSCAINLQILQLSFNM-LEDKYLEVFRGAESLRYLNLDRN 663
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
++ F GL NL LDL N ITD ++K L
Sbjct: 664 R-FNGSCLRNFVGL-NLEHLDLS-------------------------YNEITDDNLKLL 696
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
NLKS+ + +++ G + +L L L +T CL S L L LN
Sbjct: 697 GSCPNLKSINLHLNELEGHGFDIFESTTELEWLTLGSNRLTDDCLRYFSRNLDLTALYLN 756
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
Q + G SL L+L N I + L+H + L L L L + +GD GL
Sbjct: 757 ENQFNGSGFVYLKNAKSLDTLSLSDNPIDSQYLIHFRNLDKLNYLELGNIRLGD-GLKYF 815
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS---FTG----ISDGSLRKLAGL-- 347
T L+ + L +T + L+ L L+ I+ S TG I G L L L
Sbjct: 816 TNSYLLEDIRLYNTGITDQDLQSLVFGNKLKRIDFSGNALTGEVFDIFRGKLEFLERLDI 875
Query: 348 ------SSLKSLNLDARQITDTGLAALTSLTG-----------LTHLDLFGARITDSGAA 390
SSL + D+ I + L+ G LT L + + D+ +
Sbjct: 876 NDNQIGSSLPDIFKDSHHINEVNLSNTQINPGHLNYFSHCAATLTRLYMSNLNLQDNDLS 935
Query: 391 YLRNFKNLRSLEICGGGLTDAGL-------TGLVSLNVSNSRITSAGLRHLKPLKNLRSL 443
F+ L+ L + G T + L T L LN++N+++ L +L+ +L +L
Sbjct: 936 VFGGFQQLKDLNLSGNRFTGSFLIQLKHLATELEELNLANNQLNDQNLYYLEAFSSLNTL 995
Query: 444 TL 445
L
Sbjct: 996 NL 997
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 160/375 (42%), Gaps = 28/375 (7%)
Query: 56 GSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
G +L +DLS +++TD L L C NL+S++ + ++ G + + L L+
Sbjct: 675 GLNLEHLDLSYNEITDDNLKLLGSCPNLKSINLHLN-ELEGHGFDIFESTTELEWLTL-G 732
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL--------------- 160
+N +T ++ F+ ++L L L G V LK L++L
Sbjct: 733 SNRLTDDCLRYFSRNLDLTALYLNENQFNGSGFVYLKNAKSLDTLSLSDNPIDSQYLIHF 792
Query: 161 -NIKWCNCITDSDMKPLSGL---TN---LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
N+ N + +++ GL TN L+ +++ + +TD + L KL ++ G
Sbjct: 793 RNLDKLNYLELGNIRLGDGLKYFTNSYLLEDIRLYNTGITDQDLQSLVFGNKLKRIDFSG 852
Query: 214 CPVTAACLDSLSA-LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
+T D L L L++N Q+ + F + +NL +I L +
Sbjct: 853 NALTGEVFDIFRGKLEFLERLDINDNQIGSSLPDIFKDSHHINEVNLSNTQINPGHLNYF 912
Query: 273 KG-LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL-TNLESIN 330
L L + + + D L G LK L LS + S L L L T LE +N
Sbjct: 913 SHCAATLTRLYMSNLNLQDNDLSVFGGFQQLKDLNLSGNRFTGSFLIQLKHLATELEELN 972
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL-TSLTGLTHLDLFGARITDSGA 389
L+ ++D +L L SSL +LNL + GL L TS + L L+L G I+D
Sbjct: 973 LANNQLNDQNLYYLEAFSSLNTLNLSQNLVEGDGLINLRTSASVLEVLNLSGNSISDDDL 1032
Query: 390 AYLRNFKNLRSLEIC 404
+L + + L+ + +
Sbjct: 1033 QFLEHARFLKEVRLA 1047
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 125/332 (37%), Gaps = 59/332 (17%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
Q + G +L+ +L +LS +N I +Q + F L L L+L R+ GL
Sbjct: 759 QFNGSGFVYLKNAKSLDTLSLS-DNPIDSQYLIHFRNLDKLNYLELGNI-RLGDGLKYFT 816
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKG----LQKLTL 208
LE + + + ITD D++ L LK + S + +T +G L++L +
Sbjct: 817 NSYLLEDIRL-YNTGITDQDLQSLVFGNKLKRIDFSGNALTGEVFDIFRGKLEFLERLDI 875
Query: 209 ---------------------LNLEGCPVTAACLDSLS----ALGSLFYLNLNRCQLSDD 243
+NL + L+ S L L+ NLN L D+
Sbjct: 876 NDNQIGSSLPDIFKDSHHINEVNLSNTQINPGHLNYFSHCAATLTRLYMSNLN---LQDN 932
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGL-TNLESLNLDSCGIGDEGLVNLTGLCNL 302
F LK LNL N T L+ LK L T LE LNL + + D+ L L +L
Sbjct: 933 DLSVFGGFQQLKDLNLSGNRFTGSFLIQLKHLATELEELNLANNQLNDQNLYYLEAFSSL 992
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
L LS V GL INL + S L+ LNL I+D
Sbjct: 993 NTLNLSQNLVEGDGL-----------INLRTSA------------SVLEVLNLSGNSISD 1029
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
L L L + L + S +L N
Sbjct: 1030 DDLQFLEHARFLKEVRLADNKFNGSCVKFLLN 1061
>gi|148607488|gb|ABQ95520.1| InlA [Listeria monocytogenes]
Length = 797
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|371942104|gb|AEX60864.1| internaline [Listeria monocytogenes]
Length = 790
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|371942086|gb|AEX60855.1| truncated internaline [Listeria monocytogenes]
gi|371942128|gb|AEX60876.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNT--ISDISALSGLTSLQQL--SFGNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSDGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|340052077|emb|CBY84390.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|223698655|gb|ACN19010.1| internalin A [Listeria monocytogenes]
gi|223698913|gb|ACN19182.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|404412528|ref|YP_006698115.1| internalin A [Listeria monocytogenes SLCC7179]
gi|298360000|gb|ADI77579.1| internalin A [Listeria monocytogenes]
gi|298360676|gb|ADI77917.1| internalin A [Listeria monocytogenes]
gi|404238227|emb|CBY59628.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC7179]
gi|443428842|gb|AGC92220.1| internalin A [Listeria monocytogenes]
gi|443428848|gb|AGC92223.1| internalin A [Listeria monocytogenes]
gi|443428858|gb|AGC92228.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|255524523|ref|ZP_05391478.1| leucine-rich repeat protein [Clostridium carboxidivorans P7]
gi|296186022|ref|ZP_06854427.1| leucine Rich repeat protein [Clostridium carboxidivorans P7]
gi|255511819|gb|EET88104.1| leucine-rich repeat protein [Clostridium carboxidivorans P7]
gi|296049290|gb|EFG88719.1| leucine Rich repeat protein [Clostridium carboxidivorans P7]
Length = 683
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 157/319 (49%), Gaps = 45/319 (14%)
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
Q + L NL LDL + ++I + LK L KL++L N SD+ PL LT+
Sbjct: 371 QDISGIENLTNLQFLDLSQ-SKI-SDISELKNLTKLQTL---LLNDNEISDISPLQNLTD 425
Query: 182 LKSLQISCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
LK L + ++++D + + YL L +L L N ++ L L +L L L++ Q+
Sbjct: 426 LKQLDLEENRISDITPLQYLSDLNELYLKNNRITNISK-----LEWLTNLKILYLSQNQI 480
Query: 241 SD-DGCEKFSKIGSLKVLNL-------GFNEITDECL--------------VHLKGLTNL 278
SD +++ + K N+ DE L +++ + N+
Sbjct: 481 SDYSPVKRYYDNLTDKDFNMTNSTDSKDIVTFKDENLEKAVRDKINKETGDIYITDVKNI 540
Query: 279 ESLNLDSCGIGD-EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
SLN I D G+ NLT L + L+L + QV S + LS LTNLE++NLS+ S
Sbjct: 541 VSLNASHKNIKDISGIENLTSL---QTLDLGNNQV--SDISVLSSLTNLETLNLSYNEFS 595
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
D + KL GLS L++LNL++ +I D ++A+ +L L L+L +I++ L+ N
Sbjct: 596 D--ISKLKGLSKLETLNLNSNEIGD--ISAIQTLNNLKSLNLSNCKISNINP--LKGLNN 649
Query: 398 LRSLEICGGGLTDAGLTGL 416
L++L + ++D+ L
Sbjct: 650 LKTLWLNNNEMSDSDKEAL 668
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 172/403 (42%), Gaps = 91/403 (22%)
Query: 97 GGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLI-------------NLV---KLDLER 140
+ LRGL+NL L +N + +++ I N+V ++LE+
Sbjct: 280 NNINALRGLTNLNLLYLGQNEILDYSPTRSYYAKILNKDFDLIDSNDDNIVTFKDINLEK 339
Query: 141 CTRIH----GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG 196
R G + + K+ SL N D+ + LTNL+ L +S SK++D
Sbjct: 340 AVRSEINKPSGDIYKSDVEKIVSLQPYHENI---QDISGIENLTNLQFLDLSQSKISD-- 394
Query: 197 IAYLKGLQKL-TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 255
I+ LK L KL TLL LN ++SD + LK
Sbjct: 395 ISELKNLTKLQTLL-------------------------LNDNEISD--ISPLQNLTDLK 427
Query: 256 VLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVG-- 313
L+L N I+D + L+ L++L L L + I + L L NLK L LS Q+
Sbjct: 428 QLDLEENRISD--ITPLQYLSDLNELYLKNNRIT--NISKLEWLTNLKILYLSQNQISDY 483
Query: 314 SSGLRHLSGLTNLESINLS-------FTGISDGSLRK--------------LAGLSSLKS 352
S R+ LT+ + N++ D +L K + + ++ S
Sbjct: 484 SPVKRYYDNLTD-KDFNMTNSTDSKDIVTFKDENLEKAVRDKINKETGDIYITDVKNIVS 542
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD-- 410
LN + I D ++ + +LT L LDL +++D + L + NL +L + +D
Sbjct: 543 LNASHKNIKD--ISGIENLTSLQTLDLGNNQVSD--ISVLSSLTNLETLNLSYNEFSDIS 598
Query: 411 --AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
GL+ L +LN++++ I + ++ L NL+SL L +CK++
Sbjct: 599 KLKGLSKLETLNLNSNEI--GDISAIQTLNNLKSLNLSNCKIS 639
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 148/340 (43%), Gaps = 76/340 (22%)
Query: 171 SDMKPLSG----------------------LTNLKSLQISCSKVTDSGIAYLKGLQKLTL 208
SD+ L G T +++L ++ +++TD + LQK L
Sbjct: 214 SDINELRGLNNLYSLNLNNNEISDINELKYFTYMRTLLLNNNEITD-----ISPLQK--L 266
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSL--KVLNLGFNEI-- 264
+NL+ + +++++AL L NLN L + +S S K+LN F+ I
Sbjct: 267 INLQQLSLKNNRINNINALRGL--TNLNLLYLGQNEILDYSPTRSYYAKILNKDFDLIDS 324
Query: 265 TDECLVHLKGLTNLE-----SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
D+ +V K + NLE +N S I + + L Q ++
Sbjct: 325 NDDNIVTFKDI-NLEKAVRSEINKPSGDIYKSDVEKIVSL-----------QPYHENIQD 372
Query: 320 LSG---LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
+SG LTNL+ ++LS + ISD + +L L+ L++L L+ +I+D ++ L +LT L
Sbjct: 373 ISGIENLTNLQFLDLSQSKISD--ISELKNLTKLQTLLLNDNEISD--ISPLQNLTDLKQ 428
Query: 377 LDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG----LTGLVSLNVSNSRITSAGLR 432
LDL RI+D L+ +L L + +T+ LT L L +S ++I+
Sbjct: 429 LDLEENRISD--ITPLQYLSDLNELYLKNNRITNISKLEWLTNLKILYLSQNQISDYS-- 484
Query: 433 HLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFRPE 472
P+K +T D S D ++V+F+ E
Sbjct: 485 ---PVKRYYD------NLTDKDFNMTNSTDSKDIVTFKDE 515
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 33/153 (21%)
Query: 71 DSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR--NNAITAQGMKAFA 128
++G I++ D N+ SL+ S ++ + G+ NLTSL NN ++ + +
Sbjct: 528 ETGDIYITDVKNIVSLN------ASHKNIKDISGIENLTSLQTLDLGNNQVS--DISVLS 579
Query: 129 GLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITD------------------ 170
L NL L+L + LKGL KLE+LN+ N I D
Sbjct: 580 SLTNLETLNLSYNE--FSDISKLKGLSKLETLNLN-SNEIGDISAIQTLNNLKSLNLSNC 636
Query: 171 --SDMKPLSGLTNLKSLQISCSKVTDSGIAYLK 201
S++ PL GL NLK+L ++ ++++DS LK
Sbjct: 637 KISNINPLKGLNNLKTLWLNNNEMSDSDKEALK 669
>gi|294358397|gb|ADE73851.1| InlA [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 179/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQIRD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPDTISDGG 451
>gi|223698664|gb|ACN19016.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|298360550|gb|ADI77854.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|294358395|gb|ADE73850.1| InlA [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|22347554|gb|AAM95922.1| internalin A precursor [Listeria monocytogenes]
Length = 741
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 42 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 95
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 96 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 147
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 148 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 200
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 201 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 254
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 255 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 312
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 313 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 370
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 371 NVSIPNTVKNVTGALIAPATISDGG 395
>gi|443428862|gb|AGC92230.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL+ L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLISLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LGSLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|290350826|dbj|BAI78334.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|223698643|gb|ACN19002.1| internalin A [Listeria monocytogenes]
gi|223698646|gb|ACN19004.1| internalin A [Listeria monocytogenes]
gi|223698670|gb|ACN19020.1| internalin A [Listeria monocytogenes]
gi|223698673|gb|ACN19022.1| internalin A [Listeria monocytogenes]
gi|223698718|gb|ACN19052.1| internalin A [Listeria monocytogenes]
gi|223698754|gb|ACN19076.1| internalin A [Listeria monocytogenes]
gi|223698757|gb|ACN19078.1| internalin A [Listeria monocytogenes]
gi|223698796|gb|ACN19104.1| internalin A [Listeria monocytogenes]
gi|223698826|gb|ACN19124.1| internalin A [Listeria monocytogenes]
gi|223698829|gb|ACN19126.1| internalin A [Listeria monocytogenes]
gi|223698832|gb|ACN19128.1| internalin A [Listeria monocytogenes]
gi|223698862|gb|ACN19148.1| internalin A [Listeria monocytogenes]
gi|223698895|gb|ACN19170.1| internalin A [Listeria monocytogenes]
gi|223698925|gb|ACN19190.1| internalin A [Listeria monocytogenes]
gi|223698928|gb|ACN19192.1| internalin A [Listeria monocytogenes]
gi|223698931|gb|ACN19194.1| internalin A [Listeria monocytogenes]
gi|223698934|gb|ACN19196.1| internalin A [Listeria monocytogenes]
gi|223698937|gb|ACN19198.1| internalin A [Listeria monocytogenes]
gi|223698940|gb|ACN19200.1| internalin A [Listeria monocytogenes]
gi|223698943|gb|ACN19202.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|430743420|ref|YP_007202549.1| hypothetical protein Sinac_2547 [Singulisphaera acidiphila DSM
18658]
gi|430015140|gb|AGA26854.1| hypothetical protein Sinac_2547 [Singulisphaera acidiphila DSM
18658]
Length = 356
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 118/229 (51%), Gaps = 5/229 (2%)
Query: 169 TDSDMKPLSGLTNLKSLQISC-SKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSA 226
T++ M + L+ L+ L + SK+T++G+ +L+ L +L +++L P VT L L+
Sbjct: 121 TNATMSHVGRLSQLEELDATGGSKLTNAGLVHLQSLTRLRMVDLSLLPGVTGKGLIHLAE 180
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDS 285
L SL LNL+ D + G N ITDE L +LKGLT L L L +
Sbjct: 181 LTSLERLNLSSPVADADLVNLSRLTNLRLLRLNGGGNGITDEGLANLKGLTELRELILRN 240
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
+ GL L G+ + L+L ++ + + L L +T L+S+ + + + D L+ +
Sbjct: 241 SQVTGTGLTALQGMIAMADLKLINSHLET--LEPLQRMTGLKSLWIHRSPLDDRGLKHVE 298
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
L SL+ L+L+ +ITD GL +L L GL +D G +T G+A +
Sbjct: 299 NLKSLQYLSLEDTRITDDGLKSLLDLRGLREVDARGTGVTIMGSATFQQ 347
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 110/242 (45%), Gaps = 32/242 (13%)
Query: 213 GCPVTAACLDSLSALGSLFYLNLNR-CQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLV 270
G T A + + L L L+ +L++ G + L++++L +T + L+
Sbjct: 117 GSQATNATMSHVGRLSQLEELDATGGSKLTNAGLVHLQSLTRLRMVDLSLLPGVTGKGLI 176
Query: 271 HLKGLTNLESLNLDSC-------------------------GIGDEGLVNLTGLCNLKCL 305
HL LT+LE LNL S GI DEGL NL GL L+ L
Sbjct: 177 HLAELTSLERLNLSSPVADADLVNLSRLTNLRLLRLNGGGNGITDEGLANLKGLTELREL 236
Query: 306 ELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL 365
L ++QV +GL L G+ + + L + + +L L ++ LKSL + + D GL
Sbjct: 237 ILRNSQVTGTGLTALQGMIAMADLKLINSHLE--TLEPLQRMTGLKSLWIHRSPLDDRGL 294
Query: 366 AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSR 425
+ +L L +L L RITD G L + + LR ++ G G+T + G + SN +
Sbjct: 295 KHVENLKSLQYLSLEDTRITDDGLKSLLDLRGLREVDARGTGVT---IMGSATFQQSNPK 351
Query: 426 IT 427
+
Sbjct: 352 TS 353
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 113/237 (47%), Gaps = 52/237 (21%)
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG---IGDEGLVNLTGLCNLKCLEL 307
GS+K +LG ++ T+ + H+ L+ LE LD+ G + + GLV+L L L+ ++L
Sbjct: 108 FGSVKQASLG-SQATNATMSHVGRLSQLE--ELDATGGSKLTNAGLVHLQSLTRLRMVDL 164
Query: 308 SD-TQVGSSGLRHLSGLTNLESINLSFT-------------------------GISDGSL 341
S V GL HL+ LT+LE +NLS GI+D L
Sbjct: 165 SLLPGVTGKGLIHLAELTSLERLNLSSPVADADLVNLSRLTNLRLLRLNGGGNGITDEGL 224
Query: 342 RKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
L GL+ L+ L L Q+T TGL AL + + L L + +L +L
Sbjct: 225 ANLKGLTELRELILRNSQVTGTGLTALQGMIAMADLKLINS--------------HLETL 270
Query: 402 EICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
E +TGL SL + S + GL+H++ LK+L+ L+LE ++T + +K L
Sbjct: 271 EPL------QRMTGLKSLWIHRSPLDDRGLKHVENLKSLQYLSLEDTRITDDGLKSL 321
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 27/223 (12%)
Query: 66 GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMK 125
GS +T++GL+HL+ + L+ +D + ++ GL HL L++L L+
Sbjct: 142 GSKLTNAGLVHLQSLTRLRMVDLSLLPGVTGKGLIHLAELTSLERLNL--------SSPV 193
Query: 126 AFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
A A L+NL +L R R++GG N ITD + L GLT L+ L
Sbjct: 194 ADADLVNLSRLTNLRLLRLNGG-----------------GNGITDEGLANLKGLTELREL 236
Query: 186 QISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGC 245
+ S+VT +G+ L+G+ + L L + L+ L + L L ++R L D G
Sbjct: 237 ILRNSQVTGTGLTALQGMIAMADLKLINSHL--ETLEPLQRMTGLKSLWIHRSPLDDRGL 294
Query: 246 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
+ + SL+ L+L ITD+ L L L L ++ G+
Sbjct: 295 KHVENLKSLQYLSLEDTRITDDGLKSLLDLRGLREVDARGTGV 337
>gi|386052707|ref|YP_005970265.1| internalin A [Listeria monocytogenes Finland 1998]
gi|130774801|gb|ABO32414.1| InlA [Listeria monocytogenes]
gi|130774805|gb|ABO32415.1| InlA [Listeria monocytogenes]
gi|130774807|gb|ABO32416.1| InlA [Listeria monocytogenes]
gi|150371724|dbj|BAF65677.1| internalin A [Listeria monocytogenes]
gi|150371780|dbj|BAF65679.1| internalin A [Listeria monocytogenes]
gi|150371784|dbj|BAF65681.1| internalin A [Listeria monocytogenes]
gi|150371788|dbj|BAF65683.1| internalin A [Listeria monocytogenes]
gi|150371790|dbj|BAF65684.1| internalin A [Listeria monocytogenes]
gi|150371792|dbj|BAF65685.1| internalin A [Listeria monocytogenes]
gi|150371798|dbj|BAF65688.1| internalin A [Listeria monocytogenes]
gi|150371802|dbj|BAF65690.1| internalin A [Listeria monocytogenes]
gi|150371808|dbj|BAF65693.1| internalin A [Listeria monocytogenes]
gi|150371814|dbj|BAF65696.1| internalin A [Listeria monocytogenes]
gi|150371818|dbj|BAF65698.1| internalin A [Listeria monocytogenes]
gi|150371824|dbj|BAF65701.1| internalin A [Listeria monocytogenes]
gi|150371830|dbj|BAF65704.1| internalin A [Listeria monocytogenes]
gi|150371832|dbj|BAF65705.1| internalin A [Listeria monocytogenes]
gi|150371834|dbj|BAF65706.1| internalin A [Listeria monocytogenes]
gi|150371836|dbj|BAF65707.1| internalin A [Listeria monocytogenes]
gi|150371838|dbj|BAF65708.1| internalin A [Listeria monocytogenes]
gi|150371844|dbj|BAF65711.1| internalin A [Listeria monocytogenes]
gi|150371848|dbj|BAF65713.1| internalin A [Listeria monocytogenes]
gi|150371850|dbj|BAF65714.1| internalin A [Listeria monocytogenes]
gi|150371854|dbj|BAF65716.1| internalin A [Listeria monocytogenes]
gi|150371864|dbj|BAF65721.1| internalin A [Listeria monocytogenes]
gi|150371870|dbj|BAF65724.1| internalin A [Listeria monocytogenes]
gi|290350828|dbj|BAI78335.1| internalin A [Listeria monocytogenes]
gi|290350832|dbj|BAI78337.1| internalin A [Listeria monocytogenes]
gi|290350834|dbj|BAI78338.1| internalin A [Listeria monocytogenes]
gi|290350840|dbj|BAI78341.1| internalin A [Listeria monocytogenes]
gi|298359802|gb|ADI77480.1| internalin A [Listeria monocytogenes]
gi|298359828|gb|ADI77493.1| internalin A [Listeria monocytogenes]
gi|298359876|gb|ADI77517.1| internalin A [Listeria monocytogenes]
gi|298359878|gb|ADI77518.1| internalin A [Listeria monocytogenes]
gi|298359918|gb|ADI77538.1| internalin A [Listeria monocytogenes]
gi|298359964|gb|ADI77561.1| internalin A [Listeria monocytogenes]
gi|298359966|gb|ADI77562.1| internalin A [Listeria monocytogenes]
gi|298360014|gb|ADI77586.1| internalin A [Listeria monocytogenes]
gi|298360038|gb|ADI77598.1| internalin A [Listeria monocytogenes]
gi|298360084|gb|ADI77621.1| internalin A [Listeria monocytogenes]
gi|298360104|gb|ADI77631.1| internalin A [Listeria monocytogenes]
gi|298360134|gb|ADI77646.1| internalin A [Listeria monocytogenes]
gi|298360170|gb|ADI77664.1| internalin A [Listeria monocytogenes]
gi|298360178|gb|ADI77668.1| internalin A [Listeria monocytogenes]
gi|298360214|gb|ADI77686.1| internalin A [Listeria monocytogenes]
gi|298360242|gb|ADI77700.1| internalin A [Listeria monocytogenes]
gi|298360244|gb|ADI77701.1| internalin A [Listeria monocytogenes]
gi|298360254|gb|ADI77706.1| internalin A [Listeria monocytogenes]
gi|298360278|gb|ADI77718.1| internalin A [Listeria monocytogenes]
gi|298360310|gb|ADI77734.1| internalin A [Listeria monocytogenes]
gi|298360334|gb|ADI77746.1| internalin A [Listeria monocytogenes]
gi|298360338|gb|ADI77748.1| internalin A [Listeria monocytogenes]
gi|298360376|gb|ADI77767.1| internalin A [Listeria monocytogenes]
gi|298360384|gb|ADI77771.1| internalin A [Listeria monocytogenes]
gi|298360436|gb|ADI77797.1| internalin A [Listeria monocytogenes]
gi|298360532|gb|ADI77845.1| internalin A [Listeria monocytogenes]
gi|298360542|gb|ADI77850.1| internalin A [Listeria monocytogenes]
gi|298360552|gb|ADI77855.1| internalin A [Listeria monocytogenes]
gi|298360564|gb|ADI77861.1| internalin A [Listeria monocytogenes]
gi|298360568|gb|ADI77863.1| internalin A [Listeria monocytogenes]
gi|298360596|gb|ADI77877.1| internalin A [Listeria monocytogenes]
gi|298360666|gb|ADI77912.1| internalin A [Listeria monocytogenes]
gi|298360710|gb|ADI77934.1| internalin A [Listeria monocytogenes]
gi|346645358|gb|AEO37983.1| internalin A [Listeria monocytogenes Finland 1998]
gi|443428778|gb|AGC92188.1| internalin A [Listeria monocytogenes]
gi|443428804|gb|AGC92201.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|298359950|gb|ADI77554.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|47096455|ref|ZP_00234048.1| internalin A precursor [Listeria monocytogenes str. 1/2a F6854]
gi|254913677|ref|ZP_05263689.1| internalin A [Listeria monocytogenes J2818]
gi|254937992|ref|ZP_05269689.1| internalin A [Listeria monocytogenes F6900]
gi|386046091|ref|YP_005964423.1| internalin A [Listeria monocytogenes J0161]
gi|47015176|gb|EAL06116.1| internalin A precursor [Listeria monocytogenes str. 1/2a F6854]
gi|194239410|emb|CAQ76845.1| internalin A [Listeria monocytogenes]
gi|223006792|gb|ACM69353.1| internalin A [Listeria monocytogenes]
gi|223006794|gb|ACM69354.1| internalin A [Listeria monocytogenes]
gi|258610604|gb|EEW23212.1| internalin A [Listeria monocytogenes F6900]
gi|293591690|gb|EFG00025.1| internalin A [Listeria monocytogenes J2818]
gi|298359952|gb|ADI77555.1| internalin A [Listeria monocytogenes]
gi|298359956|gb|ADI77557.1| internalin A [Listeria monocytogenes]
gi|298359986|gb|ADI77572.1| internalin A [Listeria monocytogenes]
gi|298360086|gb|ADI77622.1| internalin A [Listeria monocytogenes]
gi|298360130|gb|ADI77644.1| internalin A [Listeria monocytogenes]
gi|298360206|gb|ADI77682.1| internalin A [Listeria monocytogenes]
gi|298360572|gb|ADI77865.1| internalin A [Listeria monocytogenes]
gi|298360644|gb|ADI77901.1| internalin A [Listeria monocytogenes]
gi|345533082|gb|AEO02523.1| internalin A [Listeria monocytogenes J0161]
gi|443428774|gb|AGC92186.1| internalin A [Listeria monocytogenes]
gi|443428776|gb|AGC92187.1| internalin A [Listeria monocytogenes]
gi|443428868|gb|AGC92233.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|223698976|gb|ACN19224.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|194326157|emb|CAQ77237.1| internalin A [Listeria monocytogenes]
gi|290350820|dbj|BAI78331.1| internalin A [Listeria monocytogenes]
gi|290350836|dbj|BAI78339.1| internalin A [Listeria monocytogenes]
gi|298360124|gb|ADI77641.1| internalin A [Listeria monocytogenes]
gi|298360394|gb|ADI77776.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|443428838|gb|AGC92218.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|290350830|dbj|BAI78336.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LTPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|223698835|gb|ACN19130.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|356572954|ref|XP_003554630.1| PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max]
Length = 641
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 211/445 (47%), Gaps = 58/445 (13%)
Query: 69 VTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN--AITAQGMK 125
VTD GL + C L+ L +C++ISD G++ L L F + ++++ ++
Sbjct: 158 VTDIGLAKIAVGCGKLERLSLKWCLEISDLGIDLL--CKKCLDLKFLDVSYLKVSSESLR 215
Query: 126 AFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLESLNIKWCNCITDSDM-KPLSGLTNL 182
+ A L+ L + C+ + GL L KG L+++++ C+C++ S + +SG L
Sbjct: 216 SIASLLKLEVFIMVGCSLVDDVGLRFLEKGCPLLKAIDVSRCDCVSSSGLISVISGHGGL 275
Query: 183 KSLQISCS--KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY-LNLNRCQ 239
+ L +++ + L+ L++L ++ ++G V+ L ++ L L L++C
Sbjct: 276 EQLDAGYCLFELSAPLVKCLENLKQLRIIRIDGVRVSDFILQTIGTNCKLLVELGLSKCV 335
Query: 240 -LSDDGCEKF-SKIGSLKVLNL---------GFNEITDECLVHLKGLTNLESLNLDSCGI 288
+++ G + S G+LK+L+L + I D C +L L L+SC +
Sbjct: 336 GVTNKGIMQLVSGCGNLKILDLTCCQFISDTAISTIADSC-------PDLVCLKLESCDM 388
Query: 289 GDEGLVNLTGL-CN-LKCLELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKL 344
E + GL C+ LK L+L+D + LR+LS + L + L T ISD L +
Sbjct: 389 VTENCLYQLGLNCSLLKELDLTDCSGIDDIALRYLSRCSELVRLKLGLCTNISDIGLAHI 448
Query: 345 A-GLSSLKSLNL-DARQITDTGLAALTS-LTGLTHLDL-FGARITDSGAAYLRNFKNLRS 400
A + L+L +I D GLAALTS GLT L+L + RITD G Y+ + L
Sbjct: 449 ACNCPKMTELDLYRCVRIGDDGLAALTSGCKGLTKLNLSYCNRITDRGMEYISHLGELSD 508
Query: 401 LEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPL------------KNLRSLTLESC 448
LE+ GL++ G+ + +S R+ L+H + + +NLR + + C
Sbjct: 509 LEL--RGLSNITSIGIKEVAISCKRLADLDLKHCEKIDDSGFWALAFYSQNLRQINMSYC 566
Query: 449 KVT-------ANDIKRLQSRDLPNL 466
V+ ++KRLQ L L
Sbjct: 567 IVSDMVLCMLMGNLKRLQDAKLVCL 591
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 13/188 (6%)
Query: 20 LTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGS-DVTDSGLIHL 77
+ +++L C+ L L LG ++D + IA + +DL + D GL L
Sbjct: 415 IDDIALRYLSRCSELVRLKLGLCTNISDIGLAHIACNCPKMTELDLYRCVRIGDDGLAAL 474
Query: 78 KD-CSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVK 135
C L L+ ++C +I+D G+E++ L L+ L R + IT+ G+K A L
Sbjct: 475 TSGCKGLTKLNLSYCNRITDRGMEYISHLGELSDLELRGLSNITSIGIKEVAISCKRLAD 534
Query: 136 LDLERCTRI-HGGLVNLKGLMK-LESLNIKWCNCITDSDMKPLSGLTNLKSLQ----ISC 189
LDL+ C +I G L + L +N+ +C SDM + NLK LQ +
Sbjct: 535 LDLKHCEKIDDSGFWALAFYSQNLRQINMSYC---IVSDMVLCMLMGNLKRLQDAKLVCL 591
Query: 190 SKVTDSGI 197
SKV+ G+
Sbjct: 592 SKVSVKGL 599
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 107/250 (42%), Gaps = 39/250 (15%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSD-VTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEH 101
++D + IA L+ + L D VT++ L L +CS L+ LD C I D L +
Sbjct: 363 ISDTAISTIADSCPDLVCLKLESCDMVTENCLYQLGLNCSLLKELDLTDCSGIDDIALRY 422
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRI-HGGLVNL-KGLMKLE 158
L S L L I+ G+ A + +LDL RC RI GL L G L
Sbjct: 423 LSRCSELVRLKLGLCTNISDIGLAHIACNCPKMTELDLYRCVRIGDDGLAALTSGCKGLT 482
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VT 217
LN+ +CN ++TD G+ Y+ L +L+ L L G +T
Sbjct: 483 KLNLSYCN------------------------RITDRGMEYISHLGELSDLELRGLSNIT 518
Query: 218 AACLDSLS-ALGSLFYLNLNRCQLSDDGCEKFSKIG----SLKVLNLGFNEITDECLVHL 272
+ + ++ + L L+L C+ DD F + +L+ +N+ + ++D L L
Sbjct: 519 SIGIKEVAISCKRLADLDLKHCEKIDDS--GFWALAFYSQNLRQINMSYCIVSDMVLCML 576
Query: 273 KGLTNLESLN 282
G NL+ L
Sbjct: 577 MG--NLKRLQ 584
>gi|313485072|gb|ADR53007.1| InlA [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|223698607|gb|ACN18978.1| internalin A [Listeria monocytogenes]
gi|223698703|gb|ACN19042.1| internalin A [Listeria monocytogenes]
gi|223698760|gb|ACN19080.1| internalin A [Listeria monocytogenes]
gi|223698907|gb|ACN19178.1| internalin A [Listeria monocytogenes]
gi|223698910|gb|ACN19180.1| internalin A [Listeria monocytogenes]
gi|223698916|gb|ACN19184.1| internalin A [Listeria monocytogenes]
gi|223698919|gb|ACN19186.1| internalin A [Listeria monocytogenes]
gi|223698964|gb|ACN19216.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|130774825|gb|ABO32425.1| InlA [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|130774819|gb|ABO32422.1| InlA [Listeria monocytogenes]
gi|167861894|gb|ACA05646.1| InlA [Listeria monocytogenes]
gi|167861946|gb|ACA05672.1| InlA [Listeria monocytogenes]
gi|167861948|gb|ACA05673.1| InlA [Listeria monocytogenes]
gi|194239402|emb|CAQ76841.1| internalin A [Listeria monocytogenes]
gi|298360052|gb|ADI77605.1| internalin A [Listeria monocytogenes]
gi|298360164|gb|ADI77661.1| internalin A [Listeria monocytogenes]
gi|298360372|gb|ADI77765.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|328719510|ref|XP_001948716.2| PREDICTED: f-box/LRR-repeat protein 14-like [Acyrthosiphon pisum]
Length = 467
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 173/336 (51%), Gaps = 52/336 (15%)
Query: 52 IASQGSSLLSVDLSG-SDVTDSGL--IHLKDCSNLQSLDFNFCIQISDGGL----EHLRG 104
I +L+S+++SG + D L + L+ N+ L+ + C Q++DGGL + LRG
Sbjct: 156 IVQNVPNLVSLNMSGCYHIKDEDLHQMFLEHHPNITELNLSLCKQLTDGGLIRIADTLRG 215
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLER-CTRIHG-GLVNLKGLMK------ 156
L T L + + IT +G A + +K R C + GL ++ G K
Sbjct: 216 L---TRLEIQGCSYITNKGFSHIARKLKKLKYLNLRSCWHLSDVGLSHISGASKDSTDGN 272
Query: 157 --LESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLE 212
LE L ++ C ITD +K +S GL +L+SL +S C +TD+G+ Y+ + L LNL
Sbjct: 273 AQLEFLGLQDCQHITDEGLKYVSEGLRSLRSLNLSFCVNITDTGLNYVSRMNTLDELNLS 332
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVH 271
C D++S +G + YL+ +GC +K+GSL N+ F ++I D+ L+H
Sbjct: 333 AC-------DNISDIG-IGYLS--------EGC---TKLGSL---NVSFCDKIGDQALLH 370
Query: 272 L-KGLTNLESLNLDSCGIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLSGLTN-LE 327
+ GL L +L+L SC I D+G++ ++ L NL+ L + V GL HLS L
Sbjct: 371 VSHGLYGLHTLSLGSCQISDDGILYISKSLRNLEVLNIGQCNSVTDKGLEHLSDSCKLLR 430
Query: 328 SINL-SFTGISDGSLRKLAGLSSLK--SLNLDARQI 360
SI+L T I+ + K+ + +++ ++N D Q+
Sbjct: 431 SIDLYGCTKITKEAKEKILKMPNIRRDTVNEDLWQL 466
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 6/156 (3%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
+ D+ + ++ SL S++LS ++TD+GL ++ + L L+ + C ISD G+ +L
Sbjct: 286 ITDEGLKYVSEGLRSLRSLNLSFCVNITDTGLNYVSRMNTLDELNLSACDNISDIGIGYL 345
Query: 103 -RGLSNLTSLSFRRNNAITAQG-MKAFAGLINLVKLDLERCTRIHGGLVNL-KGLMKLES 159
G + L SL+ + I Q + GL L L L C G++ + K L LE
Sbjct: 346 SEGCTKLGSLNVSFCDKIGDQALLHVSHGLYGLHTLSLGSCQISDDGILYISKSLRNLEV 405
Query: 160 LNIKWCNCITDSDMKPLSGLTN-LKSLQI-SCSKVT 193
LNI CN +TD ++ LS L+S+ + C+K+T
Sbjct: 406 LNIGQCNSVTDKGLEHLSDSCKLLRSIDLYGCTKIT 441
>gi|223698901|gb|ACN19174.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|223698868|gb|ACN19152.1| internalin A [Listeria monocytogenes]
gi|223698898|gb|ACN19172.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|156377140|ref|XP_001630715.1| predicted protein [Nematostella vectensis]
gi|156217741|gb|EDO38652.1| predicted protein [Nematostella vectensis]
Length = 398
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 158/308 (51%), Gaps = 33/308 (10%)
Query: 81 SNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLI-NLVKLD 137
S ++SL+ C ++D + H ++ L LT L IT + A + NL LD
Sbjct: 94 SCIESLNLKGCYNVTDTSIGHAFVKYLPTLTVLDLSLCKQITDSSLGKIADFLKNLEFLD 153
Query: 138 LERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT---------NLKSLQ 186
L C I G L+ GL+KL+ LN++ C I+D+ + LSGL+ NL +L
Sbjct: 154 LAGCCNITNTGLLLCSWGLVKLKHLNLRSCRHISDAGILHLSGLSNNINAHGNKNLTTLC 213
Query: 187 IS-CSKVTDSGIAYL-KGLQKLTLLNLE-GCPVTAACLDSLSALGSLFYLNLNRCQ-LSD 242
+ C K+TD+ + ++ KGL L LNL C ++ A L L+ L SL LNL C+ +++
Sbjct: 214 LQDCQKITDNALRHISKGLINLECLNLSFCCGISGAGLAHLATLRSLRELNLRSCEGVNN 273
Query: 243 DGCEKFSKIG-SLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGLVNLT-- 297
+G + G +L L++ F ++I D L H+ GL +L++L L+S I DEGL ++
Sbjct: 274 EGIAHLAVGGLNLVCLDVSFCDKIGDVALNHISSGLNHLQNLGLNSSHITDEGLCKISRH 333
Query: 298 ----GLCNL-KCLELSDTQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAGLSSLK 351
+ N+ +C +++D + S S L + +I+L T ++ L KL L L+
Sbjct: 334 LRELRVLNIGQCTQITDQSIASIA----SNLICITNIDLYGCTKVTKCGLEKLMHLPKLR 389
Query: 352 SLNLDARQ 359
LNL Q
Sbjct: 390 VLNLGLWQ 397
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 157/320 (49%), Gaps = 41/320 (12%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKP--LSGLTNLKSLQIS-CSKVTDSGIAYLKG-LQKL 206
++ L +ESLN+K C +TD+ + + L L L +S C ++TDS + + L+ L
Sbjct: 90 VQSLSCIESLNLKGCYNVTDTSIGHAFVKYLPTLTVLDLSLCKQITDSSLGKIADFLKNL 149
Query: 207 TLLNLEGC--PVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKI-------GSLKV 256
L+L GC L L L +LNL C+ +SD G S + G+ +
Sbjct: 150 EFLDLAGCCNITNTGLLLCSWGLVKLKHLNLRSCRHISDAGILHLSGLSNNINAHGNKNL 209
Query: 257 LNLGFNE---ITDECLVHL-KGLTNLESLNLD-SCGIGDEGLVNLTGLCNLKCLELSDTQ 311
L + ITD L H+ KGL NLE LNL CGI GL +L L +L+ L L +
Sbjct: 210 TTLCLQDCQKITDNALRHISKGLINLECLNLSFCCGISGAGLAHLATLRSLRELNLRSCE 269
Query: 312 -VGSSGLRHLS-GLTNLESINLSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAA 367
V + G+ HL+ G NL +++SF I D +L ++ GL+ L++L L++ ITD GL
Sbjct: 270 GVNNEGIAHLAVGGLNLVCLDVSFCDKIGDVALNHISSGLNHLQNLGLNSSHITDEGLCK 329
Query: 368 LT-SLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSR 425
++ L L L++ +ITD A ++ S IC +T+ L G ++
Sbjct: 330 ISRHLRELRVLNIGQCTQITDQSIA------SIASNLIC---ITNIDLYGC-------TK 373
Query: 426 ITSAGLRHLKPLKNLRSLTL 445
+T GL L L LR L L
Sbjct: 374 VTKCGLEKLMHLPKLRVLNL 393
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 91/175 (52%), Gaps = 9/175 (5%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD+ L H+ K NL+ L+ +FC IS GL HL L +L L+ R + +G+
Sbjct: 220 ITDNALRHISKGLINLECLNLSFCCGISGAGLAHLATLRSLRELNLRSCEGVNNEGIAHL 279
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLS-GLTNLK 183
A G +NLV LD+ C +I +N GL L++L + + ITD + +S L L+
Sbjct: 280 AVGGLNLVCLDVSFCDKIGDVALNHISSGLNHLQNLGLNSSH-ITDEGLCKISRHLRELR 338
Query: 184 SLQI-SCSKVTDSGIAYLKG-LQKLTLLNLEGCPVTAAC-LDSLSALGSLFYLNL 235
L I C+++TD IA + L +T ++L GC C L+ L L L LNL
Sbjct: 339 VLNIGQCTQITDQSIASIASNLICITNIDLYGCTKVTKCGLEKLMHLPKLRVLNL 393
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 91/178 (51%), Gaps = 27/178 (15%)
Query: 301 NLK-CLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAG-LSSLKSLNLDA 357
NLK C ++DT +G + +++L LT L+ LS I+D SL K+A L +L+ L+L
Sbjct: 100 NLKGCYNVTDTSIGHAFVKYLPTLTVLD---LSLCKQITDSSLGKIADFLKNLEFLDLAG 156
Query: 358 R-QITDTGLAALT-SLTGLTHLDLFGAR-ITDSGAAYLRNF---------KNLRSL---- 401
IT+TGL + L L HL+L R I+D+G +L KNL +L
Sbjct: 157 CCNITNTGLLLCSWGLVKLKHLNLRSCRHISDAGILHLSGLSNNINAHGNKNLTTLCLQD 216
Query: 402 --EICGGGL--TDAGLTGLVSLNVSNS-RITSAGLRHLKPLKNLRSLTLESCKVTAND 454
+I L GL L LN+S I+ AGL HL L++LR L L SC+ N+
Sbjct: 217 CQKITDNALRHISKGLINLECLNLSFCCGISGAGLAHLATLRSLRELNLRSCEGVNNE 274
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 72/143 (50%), Gaps = 23/143 (16%)
Query: 347 LSSLKSLNLDA-RQITDT--GLAALTSLTGLTHLDL-FGARITDSGAAYLRNF-KNLRSL 401
LS ++SLNL +TDT G A + L LT LDL +ITDS + +F KNL L
Sbjct: 93 LSCIESLNLKGCYNVTDTSIGHAFVKYLPTLTVLDLSLCKQITDSSLGKIADFLKNLEFL 152
Query: 402 EICGG-GLTDAGL----TGLVSLNVSNSR----ITSAGLRHLKPL---------KNLRSL 443
++ G +T+ GL GLV L N R I+ AG+ HL L KNL +L
Sbjct: 153 DLAGCCNITNTGLLLCSWGLVKLKHLNLRSCRHISDAGILHLSGLSNNINAHGNKNLTTL 212
Query: 444 TLESCKVTANDIKRLQSRDLPNL 466
L+ C+ ++ R S+ L NL
Sbjct: 213 CLQDCQKITDNALRHISKGLINL 235
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 6/136 (4%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD-VTDSGLIHLKD-CSNLQSLDFN 89
+L++L L GVN++ + +A G +L+ +D+S D + D L H+ ++LQ+L N
Sbjct: 259 SLRELNLRSCEGVNNEGIAHLAVGGLNLVCLDVSFCDKIGDVALNHISSGLNHLQNLGLN 318
Query: 90 FCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAG-LINLVKLDLERCTRI-HG 146
I+D GL + R L L L+ + IT Q + + A LI + +DL CT++
Sbjct: 319 SS-HITDEGLCKISRHLRELRVLNIGQCTQITDQSIASIASNLICITNIDLYGCTKVTKC 377
Query: 147 GLVNLKGLMKLESLNI 162
GL L L KL LN+
Sbjct: 378 GLEKLMHLPKLRVLNL 393
>gi|298360230|gb|ADI77694.1| internalin A [Listeria monocytogenes]
gi|298360588|gb|ADI77873.1| internalin A [Listeria monocytogenes]
gi|298360606|gb|ADI77882.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|223698892|gb|ACN19168.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|313485070|gb|ADR53006.1| InlA [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|298360234|gb|ADI77696.1| internalin A [Listeria monocytogenes]
gi|298360500|gb|ADI77829.1| internalin A [Listeria monocytogenes]
gi|298360708|gb|ADI77933.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 182/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
+L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SSLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNDISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|130774795|gb|ABO32412.1| InlA [Listeria monocytogenes]
gi|150371796|dbj|BAF65687.1| internalin A [Listeria monocytogenes]
gi|150371806|dbj|BAF65692.1| internalin A [Listeria monocytogenes]
gi|150371822|dbj|BAF65700.1| internalin A [Listeria monocytogenes]
gi|194326149|emb|CAQ77233.1| internalin A [Listeria monocytogenes]
gi|298359930|gb|ADI77544.1| internalin A [Listeria monocytogenes]
gi|298360322|gb|ADI77740.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|371942100|gb|AEX60862.1| internaline [Listeria monocytogenes]
Length = 789
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|298359882|gb|ADI77520.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|290997409|ref|XP_002681274.1| predicted protein [Naegleria gruberi]
gi|284094897|gb|EFC48530.1| predicted protein [Naegleria gruberi]
Length = 237
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 114/229 (49%), Gaps = 1/229 (0%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L +T L +L+I + + D+ + + +++LT L+LE + S+S L +L YLN+
Sbjct: 2 LGRMTQLTTLEIGNNLIDDNMVKLISEMKQLTCLDLEINQIFNEGAKSISELRNLTYLNI 61
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
++D+G E ++ +L L + IT + + L NL LN+ IGDEG
Sbjct: 62 GNNPINDEGIESICQLDNLTDLTVSSLRITSKSAKFISKLNNLTFLNIAYNNIGDEGAKF 121
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT-GISDGSLRKLAGLSSLKSLN 354
++ + +LK L++S + G + +S L L + +S GI D R ++ + L L
Sbjct: 122 ISEIKSLKILDISLNGISPIGAKSISELDQLTVLYISQNFGIGDEGARMISEMKQLNELY 181
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
+ I + G +++ + LTHLD+ I G +R+ K+L L I
Sbjct: 182 IQDCFIGNAGAISISRMDKLTHLDISENEIQIEGETVIRDMKHLSYLSI 230
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 7/183 (3%)
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
+T L +L + + I D + ++ + L CL+L Q+ + G + +S L NL +N+
Sbjct: 5 MTQLTTLEIGNNLIDDNMVKLISEMKQLTCLDLEINQIFNEGAKSISELRNLTYLNIGNN 64
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
I+D + + L +L L + + +IT ++ L LT L++ I D GA ++
Sbjct: 65 PINDEGIESICQLDNLTDLTVSSLRITSKSAKFISKLNNLTFLNIAYNNIGDEGAKFISE 124
Query: 395 FKNLRSLEICGGGLTDAG------LTGLVSLNVS-NSRITSAGLRHLKPLKNLRSLTLES 447
K+L+ L+I G++ G L L L +S N I G R + +K L L ++
Sbjct: 125 IKSLKILDISLNGISPIGAKSISELDQLTVLYISQNFGIGDEGARMISEMKQLNELYIQD 184
Query: 448 CKV 450
C +
Sbjct: 185 CFI 187
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 113/253 (44%), Gaps = 36/253 (14%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW 164
++ LT+L NN I +K + + L LDLE
Sbjct: 5 MTQLTTLEIG-NNLIDDNMVKLISEMKQLTCLDLE------------------------- 38
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
N I + K +S L NL L I + + D GI + L LT L + +T+ +
Sbjct: 39 INQIFNEGAKSISELRNLTYLNIGNNPINDEGIESICQLDNLTDLTVSSLRITSKSAKFI 98
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL- 283
S L +L +LN+ + D+G + S+I SLK+L++ N I+ + K ++ L+ L +
Sbjct: 99 SKLNNLTFLNIAYNNIGDEGAKFISEIKSLKILDISLNGISP---IGAKSISELDQLTVL 155
Query: 284 ---DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS--- 337
+ GIGDEG ++ + L L + D +G++G +S + L +++S I
Sbjct: 156 YISQNFGIGDEGARMISEMKQLNELYIQDCFIGNAGAISISRMDKLTHLDISENEIQIEG 215
Query: 338 DGSLRKLAGLSSL 350
+ +R + LS L
Sbjct: 216 ETVIRDMKHLSYL 228
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
L +T L ++ + I D ++ ++ + L L+L+ QI + G +++ L LT+L++
Sbjct: 2 LGRMTQLTTLEIGNNLIDDNMVKLISEMKQLTCLDLEINQIFNEGAKSISELRNLTYLNI 61
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRH 433
I D G + NL L + +T + L L LN++ + I G +
Sbjct: 62 GNNPINDEGIESICQLDNLTDLTVSSLRITSKSAKFISKLNNLTFLNIAYNNIGDEGAKF 121
Query: 434 LKPLKNLRSLTL 445
+ +K+L+ L +
Sbjct: 122 ISEIKSLKILDI 133
>gi|84043404|ref|XP_951492.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348240|gb|AAQ15567.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62358736|gb|AAX79191.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei]
Length = 1394
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 138/508 (27%), Positives = 214/508 (42%), Gaps = 87/508 (17%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC 91
AL +L L G+N W + Q L LS + +TD + H C NL +LD +FC
Sbjct: 556 ALNELNLSNCFGINAGWEAIEKLQ--QLHVAILSNTHITDRNISHFSKCKNLVTLDLSFC 613
Query: 92 IQISDGGLEHLRGLSNLTSL-------------------SFRRNNAITAQGMKAFAGLI- 131
++ D + LSN+T+L R + +G++ +I
Sbjct: 614 NKLLD-----VTALSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIKGVQLEDSVIV 668
Query: 132 ------NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
+LVK+ L+ C G + L L+ LE LN+ +C+ +T S M L L L+ L
Sbjct: 669 SLGNGGSLVKVSLDDCAGF-GDVTPLSNLVTLEELNLHYCDKVT-SGMGTLGRLPQLRVL 726
Query: 186 QI--------------------------SCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTA 218
+ C K+T S IA L L++L + N C VT+
Sbjct: 727 DLGRTQVDNNSLENICTSSIPLVSLNLSHCKKITSISSIASLTALEELNIDN--SCNVTS 784
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTN 277
+ L L L+ +++D+ S+ SL LNL F +ITD + L +T
Sbjct: 785 G-WNVFGTLHQLRVATLSNTRINDENIRYVSECKSLNTLNLAFCKDITD--VTALSKITM 841
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES---INLSFT 334
LE LNLD C +G+ L L L + + +G S + S L N +S +NL +
Sbjct: 842 LEELNLDCCPNIRKGIETLGTLPKAGILSMKECYMGDSDAQQCSILWNSKSLVKLNLERS 901
Query: 335 GISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
+ S++ L+ +++L+ L L AR++ + S + L L + + TD +
Sbjct: 902 -MGFISVKALSNIATLEELVLGHARKV-----CCIPSFSCLPRLRVLNLKYTDFNDDVTK 955
Query: 394 NF---KNLRSLEICG-GGLTDAGL----TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
N K+L+SL + +TD + L LNV+ G L L LR L
Sbjct: 956 NISESKSLQSLNLSHCKWVTDISVLSSLLALEELNVNCCNGIRKGWESLGKLPLLRVAIL 1015
Query: 446 ESCKVTANDIKRLQS-RDLPNLVSFRPE 472
+TA DI L S + L L FR E
Sbjct: 1016 SDTNITAKDIACLSSCKTLVKLKFFRCE 1043
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 163/357 (45%), Gaps = 36/357 (10%)
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
++A A ++ L KL L CT I G+ L L +L+ L++ N +S ++ L +
Sbjct: 477 VEALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSGTNTDNES-LRSLCLSQTVV 535
Query: 184 SLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
SL +S C K+T+ ++++ L+ L LNL C A +++ L L L+ ++D
Sbjct: 536 SLNLSHCWKMTN--VSHISSLEALNELNLSNCFGINAGWEAIEKLQQLHVAILSNTHITD 593
Query: 243 DGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCGIGDEGLV---NLTG 298
FSK +L L+L F N++ D + L +T LE LNLDSC +GL L
Sbjct: 594 RNISHFSKCKNLVTLDLSFCNKLLD--VTALSNITTLEELNLDSCSNIRKGLSVLGELPR 651
Query: 299 LC--NLKCLELSDTQVGSSG------------------LRHLSGLTNLESINLSFTGISD 338
LC N+K ++L D+ + S G + LS L LE +NL +
Sbjct: 652 LCVLNIKGVQLEDSVIVSLGNGGSLVKVSLDDCAGFGDVTPLSNLVTLEELNLHYCDKVT 711
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAAL-TSLTGLTHLDL-FGARITD-SGAAYLRNF 395
+ L L L+ L+L Q+ + L + TS L L+L +IT S A L
Sbjct: 712 SGMGTLGRLPQLRVLDLGRTQVDNNSLENICTSSIPLVSLNLSHCKKITSISSIASLTAL 771
Query: 396 KNLR---SLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
+ L S + G L L +SN+RI +R++ K+L +L L CK
Sbjct: 772 EELNIDNSCNVTSGWNVFGTLHQLRVATLSNTRINDENIRYVSECKSLNTLNLAFCK 828
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 182/412 (44%), Gaps = 40/412 (9%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ ++L ++L+ +D+ DS + + C+ L L + C I+D + LS L L+
Sbjct: 221 SRLTNLKCLELNSTDIDDSCIGEISACAKLSKLSVSECNNITDA--TPISQLSALEELNL 278
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
IT +G+ L+ L LDL L +L LE LNI +C I +D+
Sbjct: 279 NSCYHIT-KGIGTLGMLLRLRILDLSGVPVEDNCLKDLCDCGSLERLNISYC--IQLTDI 335
Query: 174 KPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
PLS T ++ L ++ C ++T GI + L KL +L+++ ++ LDS+ G L
Sbjct: 336 NPLSNATAIEELNLNGCRRIT-RGIGVVWALPKLRVLHMKDVHLSEPSLDSVGTGGPLVK 394
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
++L+ C GF ++T L + LE LN+ C G
Sbjct: 395 VSLDNCA--------------------GFGDMT-----LLSSIVTLEELNIQKCADIISG 429
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAGLSSLK 351
+ +L L L+ L + + + S + +L +N+ S TG+ D + LA + +L+
Sbjct: 430 VGSLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNMESITGLID--VEALANILTLE 487
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG-GGLTD 410
L+L D G+ L +L L LDL G + L + + SL + +T+
Sbjct: 488 KLSLHGCTGIDAGIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTVVSLNLSHCWKMTN 547
Query: 411 ----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
+ L L LN+SN +AG ++ L+ L L + +T +I
Sbjct: 548 VSHISSLEALNELNLSNCFGINAGWEAIEKLQQLHVAILSNTHITDRNISHF 599
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 173/390 (44%), Gaps = 48/390 (12%)
Query: 94 ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG 153
I + HL + L L+ +T ++ + L NL L+L + +
Sbjct: 189 IDNNDARHLFNIGTLEELAITDTMQLT--NIRGISRLTNLKCLELNSTDIDDSCIGEISA 246
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLE 212
KL L++ CN ITD+ P+S L+ L+ L + SC +T GI L L +L +L+L
Sbjct: 247 CAKLSKLSVSECNNITDA--TPISQLSALEELNLNSCYHIT-KGIGTLGMLLRLRILDLS 303
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRC-QLSD---------------DGCEKFSK------ 250
G PV CL L GSL LN++ C QL+D +GC + ++
Sbjct: 304 GVPVEDNCLKDLCDCGSLERLNISYCIQLTDINPLSNATAIEELNLNGCRRITRGIGVVW 363
Query: 251 -IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELS 308
+ L+VL++ +++ L + L ++LD+C G GD L L+ + L+ L +
Sbjct: 364 ALPKLRVLHMKDVHLSEPSLDSVGTGGPLVKVSLDNCAGFGDMTL--LSSIVTLEELNIQ 421
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL--- 365
SG+ L L L +N+ IS + SL LN+++ TGL
Sbjct: 422 KCADIISGVGSLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNMESI----TGLIDV 477
Query: 366 AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL------VSL 419
AL ++ L L L G D+G L N L+ L++ G + L L VSL
Sbjct: 478 EALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTVVSL 537
Query: 420 NVSNS-RITSAGLRHLKPLKNLRSLTLESC 448
N+S+ ++T+ H+ L+ L L L +C
Sbjct: 538 NLSHCWKMTNVS--HISSLEALNELNLSNC 565
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 175/431 (40%), Gaps = 71/431 (16%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL----------------RGL 105
++L +D D ++ + +LQSL+ + C ++D + +G
Sbjct: 942 LNLKYTDFNDDVTKNISESKSLQSLNLSHCKWVTDISVLSSLLALEELNVNCCNGIRKGW 1001
Query: 106 SNLTSLSFRR-----NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL 160
+L L R + ITA+ + + LVKL RC ++ V + + LE L
Sbjct: 1002 ESLGKLPLLRVAILSDTNITAKDIACLSSCKTLVKLKFFRCEKLSDVTV-VYEIQSLEEL 1060
Query: 161 NIKWCNCITDSDMKPLSGL------TNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC 214
++ C+ +K L+ L L + S ++ I K L +L + E
Sbjct: 1061 IVRSCS----DGLKGLNALGTLPRLRFLLLRNVRGSDISVESIGTSKSLVRLHIEMREDL 1116
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG 274
T LS + SL L+L C + G K+ LK L+LG ++I++ L ++
Sbjct: 1117 TDTTP----LSNITSLEELSLRECGDNLGGVGTLEKLPRLKSLDLGLSDISNSTLNYIFL 1172
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
++ SLNLDS EL+D + H+S LT LE +NL
Sbjct: 1173 SRSITSLNLDS------------------SWELTD-------ISHISNLTALEELNLGGC 1207
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS-LTGLTHLDLFGARITDSGAAYLR 393
+ L+ L L+ LNL++ ++T S L L+L +TD A+Y+
Sbjct: 1208 YYITSGWKALSELPRLRVLNLESTRVTTRYDGYYISRCKSLVTLNLELCDMTD--ASYIA 1265
Query: 394 NFKNLRSLEICGGGLTDAGLTGLVS------LNVSNSRITSAGLRHLKPLKNLRSLTLES 447
N K L L I G + L + LN+ S IT LR ++P + L L
Sbjct: 1266 NIKTLEELHIGKCKELTQGFSALFTLPRLRILNLICSLITDEDLREIQPPHTIEELNLSY 1325
Query: 448 CKVTANDIKRL 458
C V NDI L
Sbjct: 1326 C-VELNDITPL 1335
>gi|223698682|gb|ACN19028.1| internalin A [Listeria monocytogenes]
Length = 712
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|22347556|gb|AAM95923.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 42 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 95
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 96 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 147
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 148 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 200
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 201 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 254
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 255 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 312
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 313 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 370
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 371 NVSIPNTVKNVTGALIAPATISDGG 395
>gi|167862032|gb|ACA05715.1| InlA [Listeria monocytogenes]
Length = 800
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|223698622|gb|ACN18988.1| internalin A [Listeria monocytogenes]
gi|223698634|gb|ACN18996.1| internalin A [Listeria monocytogenes]
gi|223698694|gb|ACN19036.1| internalin A [Listeria monocytogenes]
gi|223698712|gb|ACN19048.1| internalin A [Listeria monocytogenes]
gi|223698745|gb|ACN19070.1| internalin A [Listeria monocytogenes]
gi|223698751|gb|ACN19074.1| internalin A [Listeria monocytogenes]
gi|223698766|gb|ACN19084.1| internalin A [Listeria monocytogenes]
gi|223698769|gb|ACN19086.1| internalin A [Listeria monocytogenes]
gi|223698772|gb|ACN19088.1| internalin A [Listeria monocytogenes]
gi|223698775|gb|ACN19090.1| internalin A [Listeria monocytogenes]
gi|223698778|gb|ACN19092.1| internalin A [Listeria monocytogenes]
gi|223698787|gb|ACN19098.1| internalin A [Listeria monocytogenes]
gi|223698793|gb|ACN19102.1| internalin A [Listeria monocytogenes]
gi|223698799|gb|ACN19106.1| internalin A [Listeria monocytogenes]
gi|223698802|gb|ACN19108.1| internalin A [Listeria monocytogenes]
gi|223698805|gb|ACN19110.1| internalin A [Listeria monocytogenes]
gi|223698817|gb|ACN19118.1| internalin A [Listeria monocytogenes]
gi|223698859|gb|ACN19146.1| internalin A [Listeria monocytogenes]
gi|223698865|gb|ACN19150.1| internalin A [Listeria monocytogenes]
gi|223698979|gb|ACN19226.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|167861888|gb|ACA05643.1| InlA [Listeria monocytogenes]
gi|194326163|emb|CAQ77240.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|112961787|gb|ABI28544.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 175/378 (46%), Gaps = 60/378 (15%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
S + +TD + LKD + L + N QI+D + L L+NLT L+ NN IT
Sbjct: 1 FSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-NNQIT--D 52
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+ L NL +L+L T + L GL L+ L+ N +TD +KPL+ LT L+
Sbjct: 53 IDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPLANLTTLE 106
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYLNLNRCQL 240
L IS +KV+D + L KLT NLE T + ++ LG +L L+LN QL
Sbjct: 107 RLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDELSLNGNQL 159
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D G + + +L L+L N+I++ L L GLT L L L + I + + L GL
Sbjct: 160 KDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--ISPLAGLT 213
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------------- 343
L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 214 ALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSD 271
Query: 344 ---LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN------ 394
LA L+++ L+ QI+D L L +LT +T L L T+ Y N
Sbjct: 272 VSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKVNVSIPNT 329
Query: 395 FKNLRSLEICGGGLTDAG 412
KN+ I ++D G
Sbjct: 330 VKNVTGALIAPATISDGG 347
>gi|38154342|gb|AAR12158.1| internalin A [Listeria monocytogenes]
Length = 728
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 42 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 95
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 96 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 147
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 148 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 200
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 201 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 254
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 255 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 312
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 313 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 370
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 371 NVSIPNTVKNVTGALIAPATISDGG 395
>gi|112961778|gb|ABI28538.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 175/378 (46%), Gaps = 60/378 (15%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
S + +TD + LKD + L + N QI+D + L L+NLT L+ NN IT
Sbjct: 1 FSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-NNQIT--D 52
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+ L NL +L+L T + L GL L+ L+ N +TD +KPL+ LT L+
Sbjct: 53 IDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPLANLTTLE 106
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYLNLNRCQL 240
L IS +KV+D + L KLT NLE T + ++ LG +L L+LN QL
Sbjct: 107 RLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDELSLNGNQL 159
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D G + + +L L+L N+I++ L L GLT L L L + I + + L GL
Sbjct: 160 KDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--ISPLAGLT 213
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------------- 343
L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 214 ALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSD 271
Query: 344 ---LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN------ 394
LA L+++ L+ QI+D L L +LT +T L L T+ Y N
Sbjct: 272 VSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKVNVSIPNT 329
Query: 395 FKNLRSLEICGGGLTDAG 412
KN+ I ++D G
Sbjct: 330 VKNVTGALIAPATISDGG 347
>gi|371942116|gb|AEX60870.1| internaline [Listeria monocytogenes]
Length = 789
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|371942110|gb|AEX60867.1| internaline [Listeria monocytogenes]
gi|371942112|gb|AEX60868.1| internaline [Listeria monocytogenes]
Length = 789
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|223698658|gb|ACN19012.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|256395747|ref|YP_003117311.1| hypothetical protein Caci_6624 [Catenulispora acidiphila DSM 44928]
gi|256361973|gb|ACU75470.1| hypothetical protein Caci_6624 [Catenulispora acidiphila DSM 44928]
Length = 175
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
Query: 247 KFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE 306
+F +G+ +V + +T E LV L G+ L +LNL++ IGD+ L + L L+ L+
Sbjct: 7 RFFDVGAERVY--ADDRVTREDLVALAGMPRLRALNLNTAAIGDDDLEAVGRLVGLQDLD 64
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA 366
+S T + +G+RHLSGLT++ + + T ++D LR LA + +L+++NL I+D GL
Sbjct: 65 VSTTDITDAGVRHLSGLTDMRHLRIKETRVTDAGLRLLAPMGALETVNLRRLDISDEGLR 124
Query: 367 ALTS 370
L
Sbjct: 125 GLAE 128
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 7/151 (4%)
Query: 139 ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIA 198
+R TR LV L G+ +L +LN+ I D D++ + L L+ L +S + +TD+G+
Sbjct: 20 DRVTR--EDLVALAGMPRLRALNLNTA-AIGDDDLEAVGRLVGLQDLDVSTTDITDAGVR 76
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN 258
+L GL + L ++ VT A L L+ +G+L +NL R +SD+G ++ + L+
Sbjct: 77 HLSGLTDMRHLRIKETRVTDAGLRLLAPMGALETVNLRRLDISDEGLRGLAE--RHRCLD 134
Query: 259 -LGFNEITDECLVHLKGLTNLESLNLDSCGI 288
+ ++ DEC + GL ++ L L +C I
Sbjct: 135 TIVISDEVDECRFTVAGLAEVQRL-LPACEI 164
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 308 SDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAA 367
+D +V L L+G+ L ++NL+ I D L + L L+ L++ ITD G+
Sbjct: 18 ADDRVTREDLVALAGMPRLRALNLNTAAIGDDDLEAVGRLVGLQDLDVSTTDITDAGVRH 77
Query: 368 LTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL----------- 416
L+ LT + HL + R+TD+G L L ++ + ++D GL GL
Sbjct: 78 LSGLTDMRHLRIKETRVTDAGLRLLAPMGALETVNLRRLDISDEGLRGLAERHRCLDTIV 137
Query: 417 VSLNVSNSRITSAGLRHLKPL 437
+S V R T AGL ++ L
Sbjct: 138 ISDEVDECRFTVAGLAEVQRL 158
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 18/118 (15%)
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
LAG+ L++LNL+ I D L A+ L GL LD+ ITD+G +L
Sbjct: 30 LAGMPRLRALNLNTAAIGDDDLEAVGRLVGLQDLDVSTTDITDAGVRHL----------- 78
Query: 404 CGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSR 461
+GLT + L + +R+T AGLR L P+ L ++ L ++ ++ L R
Sbjct: 79 -------SGLTDMRHLRIKETRVTDAGLRLLAPMGALETVNLRRLDISDEGLRGLAER 129
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 24/130 (18%)
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
VT L +L+ + L LNLN + DD E ++ L+ L++ +ITD + HL GL
Sbjct: 22 VTREDLVALAGMPRLRALNLNTAAIGDDDLEAVGRLVGLQDLDVSTTDITDAGVRHLSGL 81
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 335
T +++ L + +T+V +GLR L+ + LE++NL
Sbjct: 82 T------------------------DMRHLRIKETRVTDAGLRLLAPMGALETVNLRRLD 117
Query: 336 ISDGSLRKLA 345
ISD LR LA
Sbjct: 118 ISDEGLRGLA 127
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
+VT + L G+ +L LNL + L+++ L L L+++ ++D G S
Sbjct: 21 RVTREDLVALAGMPRLRALNLNTAAIGDDDLEAVGRLVGLQDLDVSTTDITDAGVRHLSG 80
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
+ ++ L + +TD L L + LE++NL I DEGL L
Sbjct: 81 LTDMRHLRIKETRVTDAGLRLLAPMGALETVNLRRLDISDEGLRGL 126
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 383 RITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKP 436
R+T L LR+L + + D L GL L+VS + IT AG+RHL
Sbjct: 21 RVTREDLVALAGMPRLRALNLNTAAIGDDDLEAVGRLVGLQDLDVSTTDITDAGVRHLSG 80
Query: 437 LKNLRSLTLESCKVT 451
L ++R L ++ +VT
Sbjct: 81 LTDMRHLRIKETRVT 95
>gi|259489824|ref|NP_001159243.1| uncharacterized protein LOC100304332 [Zea mays]
gi|223942967|gb|ACN25567.1| unknown [Zea mays]
gi|413920256|gb|AFW60188.1| hypothetical protein ZEAMMB73_234209 [Zea mays]
Length = 648
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 210/441 (47%), Gaps = 53/441 (12%)
Query: 11 FNELVYSRCL--TEVSLE--AFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG 66
+LV +CL T+V L A LQ L L ++D +D++A + L S+D+S
Sbjct: 147 LRDLVMDKCLGVTDVGLAKVAVGCPGLQSLSLKWCREISDIGVDLLAKKCPQLRSLDISY 206
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
VT+ L L L+ + C+ + D GL+ L S+L S+ R + +++ G+ +
Sbjct: 207 LKVTNESLRSLSTLEKLEDIAMVSCLFVDDDGLQMLSMCSSLQSIDVARCHHVSSLGLAS 266
Query: 127 FA-GLINLVKL-------DLERCT--------------RIHGGLV---NLKGL----MKL 157
G +L K+ ++E C R+ G + NL+ + L
Sbjct: 267 LMDGQRSLRKINVAHSLHEIEACVLSKLSTIGETLTVLRLDGLEIFASNLQAIGSTCKNL 326
Query: 158 ESLNIKWCNCITDSDMKPL-SGLTNLKSLQISCSK-VTDSGIAYL-KGLQKLTLLNLEGC 214
+ + CN +TD + L + +L+++ ++C +T++ +A + + +K+ L LE C
Sbjct: 327 VEIGLSKCNGVTDDGIVSLVARCRDLRTIDVTCCHLLTNAALAAIAENCRKIECLRLESC 386
Query: 215 P-VTAACLDSLSALGS-LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVH 271
P V+ L+S++ L S L ++L C+++D ++ + L +L LG + I+DE LV+
Sbjct: 387 PFVSEKGLESIATLCSDLKEIDLTDCRINDAALQQLASCSELLILKLGLCSSISDEGLVY 446
Query: 272 LKG-LTNLESLNLDSC-GIGDEGLVNLTGLC-NLKCLELSD-TQVGSSGLRHLSGLTNLE 327
+ L L+L C + D+GL + C ++ L L TQ+ GL+H+ GL L
Sbjct: 447 ISANCGKLVELDLYRCSAVTDDGLAAVASGCKKMRMLNLCYCTQITDGGLKHVGGLEELA 506
Query: 328 SINL----SFTGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLT-GLTHLDLFG 381
++ L TG+ S+ G SSL L+L + D GL AL+ + L L +
Sbjct: 507 NLELRCLVRVTGVGITSIA--VGCSSLVELDLKRCYSVDDAGLWALSRYSQNLRQLTVSY 564
Query: 382 ARITDSGAAYLRNFKNLRSLE 402
++T G +L +LR L+
Sbjct: 565 CQVTGLGLCHL--LGSLRCLQ 583
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 126/471 (26%), Positives = 222/471 (47%), Gaps = 60/471 (12%)
Query: 38 LGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVT-DSGLIHLKDCSNLQSLDFNFCIQISD 96
L + GV + +D + + SL +VDLS D + L + L+ L + C+ ++D
Sbjct: 101 LARASGVGWRGLDALVAACPSLEAVDLSHCVAAGDREMAALAAAAGLRDLVMDKCLGVTD 160
Query: 97 GGLEHLR-GLSNLTSLSFRRNNAITAQGMKAFAG-LINLVKLDLERCTRIHGGLVNLKGL 154
GL + G L SLS + I+ G+ A L LD+ + L +L L
Sbjct: 161 VGLAKVAVGCPGLQSLSLKWCREISDIGVDLLAKKCPQLRSLDISYLKVTNESLRSLSTL 220
Query: 155 MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQK-------- 205
KLE + + C + D ++ LS ++L+S+ ++ C V+ G+A L Q+
Sbjct: 221 EKLEDIAMVSCLFVDDDGLQMLSMCSSLQSIDVARCHHVSSLGLASLMDGQRSLRKINVA 280
Query: 206 --------------------LTLLNLEGCPVTAACLDSLSALGS----LFYLNLNRCQ-L 240
LT+L L+G + A+ +L A+GS L + L++C +
Sbjct: 281 HSLHEIEACVLSKLSTIGETLTVLRLDGLEIFAS---NLQAIGSTCKNLVEIGLSKCNGV 337
Query: 241 SDDGCEKF-SKIGSLKVLNLGFNEI-TDECLVHL-KGLTNLESLNLDSCG-IGDEGLVNL 296
+DDG ++ L+ +++ + T+ L + + +E L L+SC + ++GL ++
Sbjct: 338 TDDGIVSLVARCRDLRTIDVTCCHLLTNAALAAIAENCRKIECLRLESCPFVSEKGLESI 397
Query: 297 TGLC-NLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKL-AGLSSLKSL 353
LC +LK ++L+D ++ + L+ L+ + L + L + ISD L + A L L
Sbjct: 398 ATLCSDLKEIDLTDCRINDAALQQLASCSELLILKLGLCSSISDEGLVYISANCGKLVEL 457
Query: 354 NL-DARQITDTGLAALTS-LTGLTHLDL-FGARITDSGAAYLRNFKNLRSLE------IC 404
+L +TD GLAA+ S + L+L + +ITD G ++ + L +LE +
Sbjct: 458 DLYRCSAVTDDGLAAVASGCKKMRMLNLCYCTQITDGGLKHVGGLEELANLELRCLVRVT 517
Query: 405 GGGLTD--AGLTGLVSLNVSNSR-ITSAGLRHL-KPLKNLRSLTLESCKVT 451
G G+T G + LV L++ + AGL L + +NLR LT+ C+VT
Sbjct: 518 GVGITSIAVGCSSLVELDLKRCYSVDDAGLWALSRYSQNLRQLTVSYCQVT 568
>gi|130774793|gb|ABO32411.1| InlA [Listeria monocytogenes]
gi|194239384|emb|CAQ76832.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|22347546|gb|AAM95918.1| internalin A precursor [Listeria monocytogenes]
gi|22347550|gb|AAM95920.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 42 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 95
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 96 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 147
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 148 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 200
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 201 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 254
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 255 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 312
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 313 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 370
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 371 NVSIPNTVKNVTGALIAPATISDGG 395
>gi|22347572|gb|AAM95931.1| internalin A precursor [Listeria monocytogenes]
Length = 741
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 170/368 (46%), Gaps = 58/368 (15%)
Query: 74 LIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINL 133
+ LKD + L + N QI+D + L L+NLT L+ NN IT + L NL
Sbjct: 57 ITPLKDLTKLVDIVMNNN-QITD--ISPLANLTNLTGLTLF-NNQIT--DIDPLKNLTNL 110
Query: 134 VKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
+L+L T + L GL L+ L+ N +TD +KPL+ LT L+ L IS +KV+
Sbjct: 111 NRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPLANLTTLERLDISSNKVS 164
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYLNLNRCQLSDDGCEKFSK 250
D + L KLT NLE T + ++ LG +L L+LN QL D G +
Sbjct: 165 DISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGT--LAS 215
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
+ +L L+L N+I++ L L GLT L L L + I + + L GL L LEL++
Sbjct: 216 LTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--ISPLAGLTALTNLELNEN 271
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK----------------LAGLSSL 350
Q+ + +S L NL + L F ISD SL K LA L+++
Sbjct: 272 QL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNI 329
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN------FKNLRSLEIC 404
L+ QI+D L L +LT +T L L T+ Y N KN+ I
Sbjct: 330 NWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKTNVSIPNTVKNVTGALIA 387
Query: 405 GGGLTDAG 412
++D G
Sbjct: 388 PATISDGG 395
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 116/240 (48%), Gaps = 45/240 (18%)
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD----EGLVNLTG 298
DG E + +L +N GFN++TD + LK LT L + +++ I D L NLTG
Sbjct: 36 DGLEY---LNNLTQINFGFNQLTD--ITPLKDLTKLVDIVMNNNQITDISPLANLTNLTG 90
Query: 299 ----------------LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
L NL LELS + S + LSGLTNL+ LSF G L+
Sbjct: 91 LTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQ--LSF-GNQVTDLK 145
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
LA L++L+ L++ + +++D ++ L LT L L +I+D L NL L
Sbjct: 146 PLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISD--ITPLGILTNLDELS 201
Query: 403 ICGGGLTDAG----LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
+ G L D G LT L L+++N++I+ +L PL L LT K+ AN I +
Sbjct: 202 LNGNQLKDIGTLASLTNLTDLDLANNQIS-----NLAPLSGLTKLT--ELKLGANQISNI 254
>gi|428225640|ref|YP_007109737.1| hypothetical protein GEI7407_2206 [Geitlerinema sp. PCC 7407]
gi|427985541|gb|AFY66685.1| leucine-rich repeat-containing protein [Geitlerinema sp. PCC 7407]
Length = 504
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 161/319 (50%), Gaps = 31/319 (9%)
Query: 147 GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKL 206
GL +L L+ L L + SD++PLS L NL++L +S + +TD + L L L
Sbjct: 85 GLTDLSPLVSLPQLTGLSLYNSSLSDLRPLSSLPNLRALDLSYANLTD--VTVLGTLGTL 142
Query: 207 TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
LNL G PV L L L L L L ++D + +L L+L +++ D
Sbjct: 143 QALNLRGNPVRD--LRPLQGLQRLHTLTLGWSTVTD--LSTLPTLPNLHQLDLSGSQVGD 198
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
+ L LE+LNL + I + L + +L+ L+L + + + + + L
Sbjct: 199 --IRSLAPQPRLETLNLSANRISS---IALPAMPSLRSLDLENNALTRVTIP--ASMGKL 251
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
ES+NL+ I+ SL+ + +L+ L+L + Q+T+ + A+ S L LDL +ITD
Sbjct: 252 ESLNLANNAIA--SLQFGGQIPALRRLSLASNQLTE--VRAIASQPQLQELDLSFNQITD 307
Query: 387 SGAAYLRNFKNLRSLEICGG-GLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLR 441
G L + +R L+I G ++D AGLT L +L++S A +R + PL+ LR
Sbjct: 308 LGP--LASLGAIRVLKISGNRPISDLRPLAGLTTLQALDLSE-----ASIRDITPLRGLR 360
Query: 442 SLTLESCKVTANDIKRLQS 460
+ LE+ ++ N I++L+S
Sbjct: 361 N--LETLVLSGNQIQQLES 377
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 183/461 (39%), Gaps = 114/461 (24%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSL-----SFRRNNAITAQGMKAFAGLI 131
L D S L SL + + + L LR LS+L +L S+ +T G +
Sbjct: 86 LTDLSPLVSLPQLTGLSLYNSSLSDLRPLSSLPNLRALDLSYANLTDVTVLGTLGTLQAL 145
Query: 132 NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK 191
NL R + L L+GL +L +L + W T +D+ L L NL L +S S+
Sbjct: 146 NL------RGNPVRD-LRPLQGLQRLHTLTLGWS---TVTDLSTLPTLPNLHQLDLSGSQ 195
Query: 192 VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL-------------------GSLFY 232
V D I L +L LNL +++ L ++ +L G L
Sbjct: 196 VGD--IRSLAPQPRLETLNLSANRISSIALPAMPSLRSLDLENNALTRVTIPASMGKLES 253
Query: 233 LNL-----------------NRCQLSDDGCEKFSKIGS---LKVLNLGFNEITD------ 266
LNL R L+ + + I S L+ L+L FN+ITD
Sbjct: 254 LNLANNAIASLQFGGQIPALRRLSLASNQLTEVRAIASQPQLQELDLSFNQITDLGPLAS 313
Query: 267 ---------------ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ 311
L L GLT L++L+L I D + L GL NL+ L LS Q
Sbjct: 314 LGAIRVLKISGNRPISDLRPLAGLTTLQALDLSEASIRD--ITPLRGLRNLETLVLSGNQ 371
Query: 312 VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 371
+ L LSGL L + + ISD LR +A L SL++L LD+ +IT + L SL
Sbjct: 372 IQQ--LESLSGLNRLSYLAIGGNQISD--LRAIAALYSLQTLMLDSNRIT--SVRPLASL 425
Query: 372 TGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGL 431
L L L +ITD A LTGL L + +RIT+
Sbjct: 426 GQLKVLTLGNNQITDPAPL--------------------AALTGLTVLQLPQNRITN--F 463
Query: 432 RHLKPLKNLRSLTL-------ESCKVTANDIKRLQSRDLPN 465
L L NLR L L C V + I + + R P+
Sbjct: 464 DALATLTNLRILGLWENPVSPPVCPVQPDSICQFELRPNPS 504
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 121/281 (43%), Gaps = 56/281 (19%)
Query: 75 IHLKDCSNLQSLDFN------FCIQISDGGLEHLRGLSN-LTSLSF-------RR----N 116
I L +L+SLD I S G LE L +N + SL F RR +
Sbjct: 221 IALPAMPSLRSLDLENNALTRVTIPASMGKLESLNLANNAIASLQFGGQIPALRRLSLAS 280
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI-KWCNCITDSDMKP 175
N +T ++A A L +LDL + +L L L ++ + K SD++P
Sbjct: 281 NQLTE--VRAIASQPQLQELDLS-----FNQITDLGPLASLGAIRVLKISGNRPISDLRP 333
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L+GLT L++L +S + + D I L+GL+ L L L G + L+SLS L L YL +
Sbjct: 334 LAGLTTLQALDLSEASIRD--ITPLRGLRNLETLVLSGNQIQQ--LESLSGLNRLSYLAI 389
Query: 236 NRCQLSD--------------------DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
Q+SD + +G LKVL LG N+ITD L L
Sbjct: 390 GGNQISDLRAIAALYSLQTLMLDSNRITSVRPLASLGQLKVLTLGNNQITDPA--PLAAL 447
Query: 276 TNLESLNLDSCGIGD-EGLVNLTGLCNLKCLELSDTQVGSS 315
T L L L I + + L LT NL+ L L + V
Sbjct: 448 TGLTVLQLPQNRITNFDALATLT---NLRILGLWENPVSPP 485
>gi|887862|gb|AAA69530.1| internalin, partial [Listeria monocytogenes]
Length = 344
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 179/379 (47%), Gaps = 66/379 (17%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 24 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 77
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L++ N +TD +KPL
Sbjct: 78 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSL--GNQVTD--LKPL 129
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 130 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 182
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 183 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLPGLTKLTELKLGANQISN--I 236
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
L GL L LEL++ Q+ + +S L NL + L F ISD
Sbjct: 237 XPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISD--------------- 279
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL 413
++ ++SLT L L + +++D + L N N+ L ++D L
Sbjct: 280 -----------ISPVSSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQISD--L 324
Query: 414 TGLVSLNVSNSRITSAGLR 432
T L +L +RIT GL
Sbjct: 325 TPLANL----TRITQLGLN 339
>gi|112961784|gb|ABI28542.1| internalin A [Listeria monocytogenes]
gi|112961796|gb|ABI28550.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 175/378 (46%), Gaps = 60/378 (15%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
S + +TD + LKD + L + N QI+D + L L+NLT L+ NN IT
Sbjct: 1 FSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-NNQIT--D 52
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+ L NL +L+L T + L GL L+ L+ N +TD +KPL+ LT L+
Sbjct: 53 IDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPLANLTTLE 106
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYLNLNRCQL 240
L IS +KV+D + L KLT NLE T + ++ LG +L L+LN QL
Sbjct: 107 RLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDELSLNGNQL 159
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D G + + +L L+L N+I++ L L GLT L L L + I + + L GL
Sbjct: 160 KDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--ISPLAGLT 213
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------------- 343
L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 214 ALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSD 271
Query: 344 ---LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN------ 394
LA L+++ L+ QI+D L L +LT +T L L T+ Y N
Sbjct: 272 VSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKVNVSIPNT 329
Query: 395 FKNLRSLEICGGGLTDAG 412
KN+ I ++D G
Sbjct: 330 VKNVTGALIAPATISDGG 347
>gi|17227620|ref|NP_484168.1| hypothetical protein alr0124 [Nostoc sp. PCC 7120]
gi|17135102|dbj|BAB77648.1| leucine-rich-repeat protein [Nostoc sp. PCC 7120]
Length = 1119
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 149/317 (47%), Gaps = 20/317 (6%)
Query: 140 RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY 199
+ T I L L L +L I N IT+ + L+ LTNL L +S +++T+ A
Sbjct: 114 QLTEIPEALAKLTNLTQL----ILSDNQITEIP-EALAKLTNLTQLNLSYNQITEIPEA- 167
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
L L LT LNL +T ++L+ L +L LNL R + E +K+ +L LNL
Sbjct: 168 LAKLTNLTQLNLSYNQITEIP-EALAKLTNLTQLNL-RGNQRTEIPEALAKLTNLTRLNL 225
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
+N+ T E L LTNL L L I E + L NL L LS Q+
Sbjct: 226 SYNQRT-EIPEALAKLTNLTQLILSDNQI-KEIPETIAKLTNLTHLILSGNQIKEIP-ET 282
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
++ LTNL + L I + +A L++L L LD QI + A+T LT LTHL L
Sbjct: 283 IAKLTNLTQLGLDGNQIKEIP-EAIAKLTNLTQLGLDGNQIKEIP-EAITKLTNLTHLIL 340
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTD-----AGLTGLVSLNVSNSRITSAGLRHL 434
G +I + + NL L + +T+ A LT L L +S+++IT L
Sbjct: 341 SGNQIKEIPET-IAKLTNLTQLALSSNQITEIPEVLAQLTNLTQLFLSSNQITQIP-EAL 398
Query: 435 KPLKNLRSLTLESCKVT 451
PL NL +L L ++T
Sbjct: 399 APLTNLTTLHLRVNQIT 415
>gi|344309443|ref|XP_003423386.1| PREDICTED: toll-like receptor 11-like [Loxodonta africana]
Length = 918
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 159/380 (41%), Gaps = 48/380 (12%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL-ESL 160
L L L SLSF+ ++Q ++ + L L R T H L +L+ L L SL
Sbjct: 143 LEPLRFLNSLSFQGYCLNSSQNIQ--------LPLSLSRLTLRHSCLTDLQELQGLFPSL 194
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA- 219
S P + +L S + S+V G+ L+GLQ L L L+G P++A
Sbjct: 195 VPGSSPTAISSPWPPFLEVLDL-SANMQLSRV---GVKTLRGLQ-LHSLRLDGTPLSALE 249
Query: 220 -------CLDSLS--------------ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN 258
LDSLS A L L+L R Q+ G E S SL+ LN
Sbjct: 250 LLASGLLHLDSLSLVDTGAEKLPGNVTAYFELSTLDLGRNQIQHIGDEDLSGYHSLEHLN 309
Query: 259 LGFNEITDECLVHLKGLTNLESLNLDSCGIG-----DEGLVNLTGLCNLKCLELSDTQVG 313
L N + L L L+ LNL +G EGLV+ NL+ L+LS ++
Sbjct: 310 LHANGLHSLPTRFLSALPQLQRLNLSMNKLGPTLALPEGLVS----SNLRVLDLSHNELS 365
Query: 314 SSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 373
+ S L LE + L IS+ S L GL LK+L+L QI L L+SL
Sbjct: 366 ALPSGAFSSLPQLEELWLGGNNISNLSSEALEGLRWLKTLDLSWNQIKVLKLGWLSSLPA 425
Query: 374 LTHLDLFGARITDSGAAYLRNFKNLRSLEICGG---GLTDAGLTGLVSLNVSNSRITSAG 430
L L+L G I + L+ + L L + L L+SL V
Sbjct: 426 LISLNLLGTYIENFSGRLLQGPQKLSHLWLGSPEILELYPPWPLTLLSLEVWAQSYIQFS 485
Query: 431 LRHLKPLKNLRSLTLESCKV 450
+ H KP + L SLTL++ V
Sbjct: 486 VPHGKPFQFLESLTLQASYV 505
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 145/357 (40%), Gaps = 50/357 (14%)
Query: 83 LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT 142
L+ LD + +Q+S G++ LRGL L SL R + ++ A
Sbjct: 211 LEVLDLSANMQLSRVGVKTLRGL-QLHSL---RLDGTPLSALELLA-------------- 252
Query: 143 RIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG----LTNLKSLQISCSKVTDSGIA 198
GL+ L+SL+ + D+ + L G L +L + +++ G
Sbjct: 253 ---------SGLLHLDSLS------LVDTGAEKLPGNVTAYFELSTLDLGRNQIQHIGDE 297
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGS-LKVL 257
L G L LNL + + LSAL L LNL+ +L + S L+VL
Sbjct: 298 DLSGYHSLEHLNLHANGLHSLPTRFLSALPQLQRLNLSMNKLGPTLALPEGLVSSNLRVL 357
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGL 317
+L NE++ L LE L L I + L GL LK L+LS Q+ L
Sbjct: 358 DLSHNELSALPSGAFSSLPQLEELWLGGNNISNLSSEALEGLRWLKTLDLSWNQIKVLKL 417
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
LS L L S+NL T I + S R L G L L L + +I + L LT L+ L
Sbjct: 418 GWLSSLPALISLNLLGTYIENFSGRLLQGPQKLSHLWLGSPEILE--LYPPWPLTLLS-L 474
Query: 378 DLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHL 434
+++ + + F+ L SL + V L+ N+ + LRHL
Sbjct: 475 EVWAQSYIQFSVPHGKPFQFLESLTLQA---------SYVLLHPGNNTVHFPSLRHL 522
>gi|291239173|ref|XP_002739507.1| PREDICTED: F-box and leucine-rich repeat protein 20-like
[Saccoglossus kowalevskii]
Length = 794
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 191/419 (45%), Gaps = 68/419 (16%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHL-KDCSNLQSLDFNFC 91
LQDL + + GVND M IA S LL +++S +++ D+ L L + C+NLQ L +C
Sbjct: 319 LQDLNISECSGVNDDMMKDIAEGCSILLYLNISHTNIADASLRVLSRCCANLQYLSLAYC 378
Query: 92 IQISDGGLEHL---RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGL 148
+ SD GL++L RG L L IT +G + + E C+ I
Sbjct: 379 KRFSDKGLQYLSHSRGCRKLIYLDLSGCTQITQEGYRNMS----------EGCSNIQSIF 428
Query: 149 VNLKGLMKLESLNIKWCNC-------------ITDSDMKPLSGLTNLKSLQIS-CSKVTD 194
+N +K E L+ C ++DS +K L+ L+ +++ ++++D
Sbjct: 429 LNDNNTLKDECLSAVTSKCHNIRSMSLLGTPHLSDSAIKTLALNRRLQKIRMEGNNRISD 488
Query: 195 SGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC-QLSDDG------- 244
GI +L K L + L CP +T L SLS ++ LN+ C ++SD G
Sbjct: 489 LGIKHLAKYCHDLRHVYLSDCPRLTDTALKSLSNCRNVSVLNIADCVRISDSGVRQMVEG 548
Query: 245 -------------CEKFSKIGSLKVL----NLGF------NEITDECLVHLKGLTNLESL 281
C + S + L+++ NL + ITD + L + +L S+
Sbjct: 549 PSGPKIRELNLTNCVRVSDVSILRIMQKCHNLSYASFCFCEHITDAGVELLGSMPSLMSV 608
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINLSF-TGISD 338
++ C + D GL +L L + +++ Q+ G++ + +LE +++S + ++D
Sbjct: 609 DISGCNVTDSGLASLGNNPRLLDVTIAECYQITDLGIQKFAQQCRDLERLDVSHCSSLTD 668
Query: 339 GSLRKLAG-LSSLKSLNLDARQ-ITDTGLAALTSLTGLTH-LDLFG-ARITDSGAAYLR 393
+++ LA L LNL Q +TD + L+ + H LD+ G ++D YLR
Sbjct: 669 SAIKNLAFCCRRLVVLNLTGCQLLTDLSIQYLSGVCHYLHSLDISGCVHVSDKSLRYLR 727
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 122/477 (25%), Positives = 208/477 (43%), Gaps = 105/477 (22%)
Query: 22 EVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLS-VDLSG-----SDVTDSGLI 75
+ +++ F C + DL G+ V W + +Q SSL S +DLS +D T S LI
Sbjct: 239 KAAIKIFSFCDIVDL--GRCAMVCRSWK--MITQTSSLWSRLDLSTVRNRVTDQTVSTLI 294
Query: 76 HLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
H C + I ++ LRG ++L SF NL
Sbjct: 295 H--KCRP-------YLIHLN------LRGCAHLKKPSF------------------NLQD 321
Query: 136 LDLERCTRIHGGLVN--LKGLMKLESLNIKWCNCITDSDMKPLSGL-TNLKSLQIS-CSK 191
L++ C+ ++ ++ +G L LNI N I D+ ++ LS NL+ L ++ C +
Sbjct: 322 LNISECSGVNDDMMKDIAEGCSILLYLNISHTN-IADASLRVLSRCCANLQYLSLAYCKR 380
Query: 192 VTDSGIAYL---KGLQKLTLLNLEGC-PVTAACLDSLSA----LGSLFYLNLNRCQLSDD 243
+D G+ YL +G +KL L+L GC +T ++S + S+F LN D
Sbjct: 381 FSDKGLQYLSHSRGCRKLIYLDLSGCTQITQEGYRNMSEGCSNIQSIF---LNDNNTLKD 437
Query: 244 GC--EKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLD-SCGIGDEGLVNLTGL 299
C SK +++ ++L G ++D + L L+ + ++ + I D G+ +L
Sbjct: 438 ECLSAVTSKCHNIRSMSLLGTPHLSDSAIKTLALNRRLQKIRMEGNNRISDLGIKHLAKY 497
Query: 300 CN-LKCLELSD-TQVGSSGLRHLSGLTNLESINLS-FTGISDGSLRKLAGLSS---LKSL 353
C+ L+ + LSD ++ + L+ LS N+ +N++ ISD +R++ S ++ L
Sbjct: 498 CHDLRHVYLSDCPRLTDTALKSLSNCRNVSVLNIADCVRISDSGVRQMVEGPSGPKIREL 557
Query: 354 NLD---------------------------ARQITDTGLAALTSLTGLTHLDLFGARITD 386
NL ITD G+ L S+ L +D+ G +TD
Sbjct: 558 NLTNCVRVSDVSILRIMQKCHNLSYASFCFCEHITDAGVELLGSMPSLMSVDISGCNVTD 617
Query: 387 SGAAYLRNFKNLRSLEICG-GGLTDAGLTGLVS-------LNVSN-SRITSAGLRHL 434
SG A L N L + I +TD G+ L+VS+ S +T + +++L
Sbjct: 618 SGLASLGNNPRLLDVTIAECYQITDLGIQKFAQQCRDLERLDVSHCSSLTDSAIKNL 674
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 27/161 (16%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRN 116
SL+SVD+SG +VTDSGL L + L + C QI+D G++ + +L L
Sbjct: 604 SLMSVDISGCNVTDSGLASLGNNPRLLDVTIAECYQITDLGIQKFAQQCRDLERLDVSHC 663
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+++T +K A C R +L LN+ C +TD ++ L
Sbjct: 664 SSLTDSAIKNLAF-----------CCR------------RLVVLNLTGCQLLTDLSIQYL 700
Query: 177 SGLTN-LKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC 214
SG+ + L SL IS C V+D + YL KG +++ +L + C
Sbjct: 701 SGVCHYLHSLDISGCVHVSDKSLRYLRKGCKRIKVLVMLYC 741
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 146/299 (48%), Gaps = 28/299 (9%)
Query: 181 NLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLS-ALGSLFYLNLNR 237
NL+ L IS CS V D + + +G L LN+ + A L LS +L YL+L
Sbjct: 318 NLQDLNISECSGVNDDMMKDIAEGCSILLYLNISHTNIADASLRVLSRCCANLQYLSLAY 377
Query: 238 CQ-LSDDGCEKFSK-IGSLKVLNL---GFNEITDECLVHL-KGLTNLESLNL-DSCGIGD 290
C+ SD G + S G K++ L G +IT E ++ +G +N++S+ L D+ + D
Sbjct: 378 CKRFSDKGLQYLSHSRGCRKLIYLDLSGCTQITQEGYRNMSEGCSNIQSIFLNDNNTLKD 437
Query: 291 EGLVNLTGLC-NLKCLELSDT-QVGSSGLRHLSGLTNLESINLSFTG-ISDGSLRKLAGL 347
E L +T C N++ + L T + S ++ L+ L+ I + ISD ++ LA
Sbjct: 438 ECLSAVTSKCHNIRSMSLLGTPHLSDSAIKTLALNRRLQKIRMEGNNRISDLGIKHLAKY 497
Query: 348 -SSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYL---RNFKNLRSL 401
L+ + L D ++TDT L +L++ ++ L++ RI+DSG + + +R L
Sbjct: 498 CHDLRHVYLSDCPRLTDTALKSLSNCRNVSVLNIADCVRISDSGVRQMVEGPSGPKIREL 557
Query: 402 EICGG-GLTDAGLTGLVS--LNVSNS------RITSAGLRHLKPLKNLRSLTLESCKVT 451
+ ++D + ++ N+S + IT AG+ L + +L S+ + C VT
Sbjct: 558 NLTNCVRVSDVSILRIMQKCHNLSYASFCFCEHITDAGVELLGSMPSLMSVDISGCNVT 616
>gi|112961781|gb|ABI28540.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 175/378 (46%), Gaps = 60/378 (15%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
S + +TD + LKD + L + N QI+D + L L+NLT L+ NN IT
Sbjct: 1 FSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-NNQIT--D 52
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+ L NL +L+L T + L GL L+ L+ N +TD +KPL+ LT L+
Sbjct: 53 IDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPLANLTTLE 106
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYLNLNRCQL 240
L IS +KV+D + L KLT NLE T + ++ LG +L L+LN QL
Sbjct: 107 RLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDELSLNGNQL 159
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D G + + +L L+L N+I++ L L GLT L L L + I + + L GL
Sbjct: 160 KDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--ISPLAGLT 213
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------------- 343
L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 214 ALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSD 271
Query: 344 ---LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN------ 394
LA L+++ L+ QI+D L L +LT +T L L T+ Y N
Sbjct: 272 VSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKVNVSIPNT 329
Query: 395 FKNLRSLEICGGGLTDAG 412
KN+ I ++D G
Sbjct: 330 VKNVTGALIAPATISDGG 347
>gi|371942136|gb|AEX60880.1| internaline [Listeria monocytogenes]
Length = 789
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
>gi|294358401|gb|ADE73853.1| InlA [Listeria monocytogenes]
Length = 800
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LAGLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVNGALIAPATISDGG 451
>gi|219821387|gb|ACL37836.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 170/368 (46%), Gaps = 58/368 (15%)
Query: 74 LIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINL 133
+ LKD + L + N QI+D + L L+NLT L+ NN IT + L NL
Sbjct: 55 ITPLKDLTKLVDIVMNNN-QITD--ISPLANLTNLTGLTLF-NNQIT--DIDPLKNLTNL 108
Query: 134 VKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
+L+L T + L GL L+ L+ N +TD +KPL+ LT L+ L IS +KV+
Sbjct: 109 NRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPLANLTTLERLDISSNKVS 162
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYLNLNRCQLSDDGCEKFSK 250
D + L KLT NLE T + ++ LG +L L+LN QL D G +
Sbjct: 163 DISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGT--LAS 213
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
+ +L L+L N+I++ L L GLT L L L + I + + L GL L LEL++
Sbjct: 214 LTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--ISPLAGLTALTNLELNEN 269
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK----------------LAGLSSL 350
Q+ + +S L NL + L F ISD SL K LA L+++
Sbjct: 270 QL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNI 327
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN------FKNLRSLEIC 404
L+ QI+D L L +LT +T L L T+ Y N KN+ I
Sbjct: 328 NWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKTNVSIPNTVKNVTGALIA 385
Query: 405 GGGLTDAG 412
++D G
Sbjct: 386 PATISDGG 393
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 116/240 (48%), Gaps = 45/240 (18%)
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD----EGLVNLTG 298
DG E + +L +N GFN++TD + LK LT L + +++ I D L NLTG
Sbjct: 34 DGLEY---LNNLTQINFGFNQLTD--ITPLKDLTKLVDIVMNNNQITDISPLANLTNLTG 88
Query: 299 ----------------LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
L NL LELS + S + LSGLTNL+ LSF G L+
Sbjct: 89 LTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQ--LSF-GNQVTDLK 143
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
LA L++L+ L++ + +++D ++ L LT L L +I+D L NL L
Sbjct: 144 PLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISD--ITPLGILTNLDELS 199
Query: 403 ICGGGLTDAG----LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
+ G L D G LT L L+++N++I+ +L PL L LT K+ AN I +
Sbjct: 200 LNGNQLKDIGTLASLTNLTDLDLANNQIS-----NLAPLSGLTKLT--ELKLGANQISNI 252
>gi|290989752|ref|XP_002677501.1| predicted protein [Naegleria gruberi]
gi|284091109|gb|EFC44757.1| predicted protein [Naegleria gruberi]
Length = 340
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 136/284 (47%), Gaps = 13/284 (4%)
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
++G+K L+NL +L + G ++ G+ +L L++ N IT K +S L
Sbjct: 45 SKGIKYLGNLMNLSELYINSNEIGDNGAEDISGMKQLTKLDVS-SNDITTKGAKHISKLN 103
Query: 181 NLKSLQISCSKVTDSGIAYLKG-LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ 239
L SL++ + + GI Y+ L +LT L++ + ++S L L L++
Sbjct: 104 KLVSLKMEENMIDAQGIKYITDQLNQLTELDIGSNDLGVLGAKAVSELSQLTSLSIENNN 163
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
L ++G S++ +L L + N+I E + L L +L + + DEG ++ L
Sbjct: 164 LLNEGAAYISRLLNLTDLCINSNQIDSEGAKDIIKLKQLTTLFISGNSLLDEGAKLISEL 223
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 359
NL L++SD ++ G+ +S L L+++ + ISD + + GL+ L LN+D
Sbjct: 224 NNLTVLDISDNELTDEGVEPISKLKQLKTLEIDENQISDEGIESICGLNQLTELNIDYNL 283
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
I+ GL++++ G I D GA + + NL+ L +
Sbjct: 284 ISAEGLSSIS-----------GNEIGDEGAEIIGDLTNLKELTV 316
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 33/294 (11%)
Query: 73 GLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLIN 132
G+ +L + NL L N +I D G E + G+ LT L N+ IT +G K + L
Sbjct: 47 GIKYLGNLMNLSELYINSN-EIGDNGAEDISGMKQLTKLDVSSND-ITTKGAKHISKLNK 104
Query: 133 LVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM----------KPLSGLTNL 182
LV L +E +++ +G+ + N +T+ D+ K +S L+ L
Sbjct: 105 LVSLKMEE------NMIDAQGIKYI----TDQLNQLTELDIGSNDLGVLGAKAVSELSQL 154
Query: 183 KSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
SL I + + + G AY+ L LT L + + + + L L L ++ L D
Sbjct: 155 TSLSIENNNLLNEGAAYISRLLNLTDLCINSNQIDSEGAKDIIKLKQLTTLFISGNSLLD 214
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNL 302
+G + S++ +L VL++ NE+TDE + + L L++L +D I DEG+ ++ GL L
Sbjct: 215 EGAKLISELNNLTVLDISDNELTDEGVEPISKLKQLKTLEIDENQISDEGIESICGLNQL 274
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
L + + + GL +SG I D + L++LK L +D
Sbjct: 275 TELNIDYNLISAEGLSSISG-----------NEIGDEGAEIIGDLTNLKELTVD 317
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 130/286 (45%), Gaps = 11/286 (3%)
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDS----GIAYLKGLQKLTLLNLEGCP 215
L++K + DS +K + L+ LK+L I+ + S GI YL L L+ L +
Sbjct: 7 LDMKGVSIFKDSFLKKIGELSQLKTLDIANAAGDRSRFSKGIKYLGNLMNLSELYINSNE 66
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG- 274
+ + +S + L L+++ ++ G + SK+ L L + N I + + ++
Sbjct: 67 IGDNGAEDISGMKQLTKLDVSSNDITTKGAKHISKLNKLVSLKMEENMIDAQGIKYITDQ 126
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
L L L++ S +G G ++ L L L + + + + G ++S L NL + ++
Sbjct: 127 LNQLTELDIGSNDLGVLGAKAVSELSQLTSLSIENNNLLNEGAAYISRLLNLTDLCINSN 186
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
I + + L L +L + + D G ++ L LT LD+ +TD G +
Sbjct: 187 QIDSEGAKDIIKLKQLTTLFISGNSLLDEGAKLISELNNLTVLDISDNELTDEGVEPISK 246
Query: 395 FKNLRSLEICGGGLTDA------GLTGLVSLNVSNSRITSAGLRHL 434
K L++LEI ++D GL L LN+ + I++ GL +
Sbjct: 247 LKQLKTLEIDENQISDEGIESICGLNQLTELNIDYNLISAEGLSSI 292
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 124/272 (45%), Gaps = 39/272 (14%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L +D+S +D+T G +H+ L+ L SL N
Sbjct: 81 LTKLDVSSNDITTK-------------------------GAKHISKLNKLVSLKMEE-NM 114
Query: 119 ITAQGMKAFAGLIN-LVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS 177
I AQG+K +N L +LD+ G + L +L SL+I+ N + + +S
Sbjct: 115 IDAQGIKYITDQLNQLTELDIGSNDLGVLGAKAVSELSQLTSLSIENNNLLNEG-AAYIS 173
Query: 178 GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
L NL L I+ +++ G + L++LT L + G + +S L +L L+++
Sbjct: 174 RLLNLTDLCINSNQIDSEGAKDIIKLKQLTTLFISGNSLLDEGAKLISELNNLTVLDISD 233
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
+L+D+G E SK+ LK L + N+I+DE + + GL L LN+D I EGL +++
Sbjct: 234 NELTDEGVEPISKLKQLKTLEIDENQISDEGIESICGLNQLTELNIDYNLISAEGLSSIS 293
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
G ++G G + LTNL+ +
Sbjct: 294 G-----------NEIGDEGAEIIGDLTNLKEL 314
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ ++L +D+S +++TD G+ + L++L+ + QISD G+E + GL+ LT L+
Sbjct: 221 SELNNLTVLDISDNELTDEGVEPISKLKQLKTLEIDEN-QISDEGIESICGLNQLTELNI 279
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGL 154
N I+A+G+ + +G N + + I G L NLK L
Sbjct: 280 DY-NLISAEGLSSISG--NEIG---DEGAEIIGDLTNLKEL 314
>gi|327272147|ref|XP_003220847.1| PREDICTED: f-box/LRR-repeat protein 14-like [Anolis carolinensis]
Length = 400
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 170/331 (51%), Gaps = 56/331 (16%)
Query: 61 SVDLSG-SDVTDSGLIH--LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
S++LSG ++TD+GL H + + S+L++L+ + C QI+D L +
Sbjct: 94 SLNLSGCYNLTDNGLGHAFVAEISSLRALNLSLCKQITDSSLGRI--------------- 138
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
AQ +K L L+L C+ I G L+ GL +L+SLN++ C ++D +
Sbjct: 139 ---AQYLKG------LEALELGGCSNITNTGLLLVAWGLPRLKSLNLRSCRHLSDVGIGH 189
Query: 176 LSGLTN--------LKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSL 224
L+G+T L+ L + C K++D + +L +GL +L LNL C ++ A L L
Sbjct: 190 LAGMTRSAAEGCLGLEQLTLQDCQKLSDLSLKHLSRGLSRLRQLNLSFCGGISDAGLLHL 249
Query: 225 SALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLE 279
S + L LNL C +SD G + GSL++ L++ F +++ D+ L ++ +GL L
Sbjct: 250 SHMSCLRVLNLRSCDNISDTGIMHLAT-GSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLR 308
Query: 280 SLNLDSCGIGDEGL----VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLS 332
SL+L SC I DEG+ + GL L +C+ ++D + HLS LT ++
Sbjct: 309 SLSLCSCHISDEGINRMVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC- 366
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
T I+ L ++ L LK LNL Q+T++
Sbjct: 367 -TRITKRGLERITQLPCLKVLNLGLWQMTES 396
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 164/327 (50%), Gaps = 32/327 (9%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM + L+L C + G + + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------EIESLNLSGCYNLTDNGLGHAFVAEISSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSG-LTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGCPV 216
LN+ C ITDS + ++ L L++L++ CS +T++G+ + GL +L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIAQYLKGLEALELGGCSNITNTGLLLVAWGLPRLKSLNLRSCRH 181
Query: 217 TA-------ACLDSLSALG--SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-NEI 264
+ A + +A G L L L CQ LSD + S+ + L+ LNL F I
Sbjct: 182 LSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLSDLSLKHLSRGLSRLRQLNLSFCGGI 241
Query: 265 TDECLVHLKGLTNLESLNLDSC-GIGDEGLVNL-TGLCNLKCLELSDT-QVGSSGLRHLS 321
+D L+HL ++ L LNL SC I D G+++L TG L L++S +VG L +++
Sbjct: 242 SDAGLLHLSHMSCLRVLNLRSCDNISDTGIMHLATGSLRLSGLDVSFCDKVGDQSLAYIA 301
Query: 322 -GLTNLESINLSFTGISD-GSLRKLAGLSSLKSLNL-DARQITDTGLAALTS-LTGLTHL 377
GL L S++L ISD G R + + L++LN+ +ITD GL + L+ LT +
Sbjct: 302 QGLDGLRSLSLCSCHISDEGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGI 361
Query: 378 DLFG-ARITDSGAAYLRNFKNLRSLEI 403
DL+G RIT G + L+ L +
Sbjct: 362 DLYGCTRITKRGLERITQLPCLKVLNL 388
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 155/292 (53%), Gaps = 33/292 (11%)
Query: 200 LKGLQKLTLLNLEGCP-VTAACLDS--LSALGSLFYLNLNRC-QLSDDGCEKFSK-IGSL 254
++G+ ++ LNL GC +T L ++ + SL LNL+ C Q++D + ++ + L
Sbjct: 86 IQGMAEIESLNLSGCYNLTDNGLGHAFVAEISSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 255 KVLNLG-FNEITDECLVHLK-GLTNLESLNLDSC-GIGDEGLVNLTGLCN--------LK 303
+ L LG + IT+ L+ + GL L+SLNL SC + D G+ +L G+ L+
Sbjct: 146 EALELGGCSNITNTGLLLVAWGLPRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 304 CLELSDTQVGSS-GLRHLS-GLTNLESINLSFTG-ISDGSLRKLAGLSSLKSLNLDA-RQ 359
L L D Q S L+HLS GL+ L +NLSF G ISD L L+ +S L+ LNL +
Sbjct: 206 QLTLQDCQKLSDLSLKHLSRGLSRLRQLNLSFCGGISDAGLLHLSHMSCLRVLNLRSCDN 265
Query: 360 ITDTGLAAL-TSLTGLTHLDL-FGARITDSGAAYL-RNFKNLRSLEICGGGLTDAGLT-- 414
I+DTG+ L T L+ LD+ F ++ D AY+ + LRSL +C ++D G+
Sbjct: 266 ISDTGIMHLATGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLRSLSLCSCHISDEGINRM 325
Query: 415 -----GLVSLNVSNS-RITSAGLRHL-KPLKNLRSLTLESC-KVTANDIKRL 458
GL +LN+ RIT GL + + L L + L C ++T ++R+
Sbjct: 326 VRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERI 377
>gi|302768605|ref|XP_002967722.1| hypothetical protein SELMODRAFT_88742 [Selaginella moellendorffii]
gi|300164460|gb|EFJ31069.1| hypothetical protein SELMODRAFT_88742 [Selaginella moellendorffii]
Length = 645
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 206/467 (44%), Gaps = 54/467 (11%)
Query: 38 LGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISD 96
L + G + ++ SL+ +DLS S V D GL+ L + ++ L CI+++D
Sbjct: 109 LNRICGFTSTGLRYLSQHCLSLVEMDLSYCSYVEDDGLLGLARLNRIEKLKLTGCIRVTD 168
Query: 97 GGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLI-NLVKLDLERCTRIHGGLVNLKGL 154
GLE L G L +L + AIT G+K A L+ LDL G+ + L
Sbjct: 169 MGLESLAAGCHRLKTLVLKGCVAITDAGIKLVAARSEELMILDLSFTEVTDEGVKYVSEL 228
Query: 155 MKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTL---- 208
L +LN+ CN + D + L +L L +S C V+ GIA L L L L
Sbjct: 229 KALRTLNLMACNNVGDRALSYLQENCKSLVDLDVSRCQNVSSVGIAALPTLLTLHLCHCS 288
Query: 209 ------------------LNLEGCPVTAACLDSLSALGSLFYLNLNRCQ---LSDDGCEK 247
L L+GC T LD ++A G L+ C+ ++D ++
Sbjct: 289 QVTEDAFLDFEKPNGIQTLRLDGCEFTHDSLDRVAA-GCQELKELSLCKSRGVTDKRIDR 347
Query: 248 -FSKIGSLKVLNLG--FNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCN-L 302
+ SLK L+L F+ L + T+++SL L+S + D L + C+ L
Sbjct: 348 LITSCKSLKKLDLTCCFDVTEISLLSIARSSTSIKSLKLESSLMVSDNSLPMVFESCHLL 407
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD-GSLRKLAGLSSLKSLNL-DARQI 360
+ L+++D + +GL + L + L+F ISD G AG L L+L R +
Sbjct: 408 EELDVTDCNLTGAGLEPIGNCVLLRVLKLAFCNISDYGIFFVGAGCHKLMELDLYRCRSV 467
Query: 361 TDTG-LAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG------GGLTD-- 410
D G ++ + L L+L + +RI+D+ + L LEI G GLT
Sbjct: 468 GDAGVISVVNGCQDLRVLNLSYCSRISDASMTAIARLSKLSQLEIRGCTLVTSDGLTQVA 527
Query: 411 AGLTGLVSLNVSN-SRITSAG---LRHLKPLKNLRSLTLESCKVTAN 453
AG LV L++ +RI G L HL P +LR + + C +T N
Sbjct: 528 AGCKRLVELDIKRCTRIGDPGLLALEHLCP--DLRQINVSYCPLTNN 572
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 190/442 (42%), Gaps = 69/442 (15%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI 92
L+ L L + D + ++A++ L+ +DLS ++VTD G+ ++ + L++L+ C
Sbjct: 181 LKTLVLKGCVAITDAGIKLVAARSEELMILDLSFTEVTDEGVKYVSELKALRTLNLMACN 240
Query: 93 QISDGGLEHLR-GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVN 150
+ D L +L+ +L L R +++ G+ A L L+ L L C+++ ++
Sbjct: 241 NVGDRALSYLQENCKSLVDLDVSRCQNVSSVGI---AALPTLLTLHLCHCSQVTEDAFLD 297
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK-VTDSGIAYL----KGLQK 205
+ +++L + C DS + +G LK L + S+ VTD I L K L+K
Sbjct: 298 FEKPNGIQTLRLDGCEFTHDSLDRVAAGCQELKELSLCKSRGVTDKRIDRLITSCKSLKK 357
Query: 206 LTL--------LNLEGCPVTAACLDSLSALGSLFY-----------------LNLNRCQL 240
L L ++L ++ + SL SL L++ C L
Sbjct: 358 LDLTCCFDVTEISLLSIARSSTSIKSLKLESSLMVSDNSLPMVFESCHLLEELDVTDCNL 417
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLTG 298
+ G E L+VL L F I+D + + G L L+L C +GD G++++
Sbjct: 418 TGAGLEPIGNCVLLRVLKLAFCNISDYGIFFVGAGCHKLMELDLYRCRSVGDAGVISV-- 475
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLD- 356
++G +L +NLS+ + ISD S+ +A LS L L +
Sbjct: 476 ---------------------VNGCQDLRVLNLSYCSRISDASMTAIARLSKLSQLEIRG 514
Query: 357 ARQITDTGLAALTS-LTGLTHLDL-FGARITDSGAAYLRNF-KNLRSLEICGGGLTDAGL 413
+T GL + + L LD+ RI D G L + +LR + + LT+ G+
Sbjct: 515 CTLVTSDGLTQVAAGCKRLVELDIKRCTRIGDPGLLALEHLCPDLRQINVSYCPLTNNGM 574
Query: 414 TGLVSLNVSNSRITSAGLRHLK 435
L L + + L HLK
Sbjct: 575 MALAKLGC----MQNMKLVHLK 592
>gi|112961790|gb|ABI28546.1| internalin A [Listeria monocytogenes]
Length = 693
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 175/378 (46%), Gaps = 60/378 (15%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
S + +TD + LKD + L + N QI+D + L L+NLT L+ NN IT
Sbjct: 1 FSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-NNQIT--D 52
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+ L NL +L+L T + L GL L+ L+ N +TD +KPL+ LT L+
Sbjct: 53 IDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPLANLTTLE 106
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYLNLNRCQL 240
L IS +KV+D + L KLT NLE T + ++ LG +L L+LN QL
Sbjct: 107 RLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDELSLNGNQL 159
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D G + + +L L+L N+I++ L L GLT L L L + I + + L GL
Sbjct: 160 KDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--ISPLAGLT 213
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------------- 343
L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 214 ALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSD 271
Query: 344 ---LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN------ 394
LA L+++ L+ QI+D L L +LT +T L L T+ Y N
Sbjct: 272 VSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKVNVSIPNT 329
Query: 395 FKNLRSLEICGGGLTDAG 412
KN+ I ++D G
Sbjct: 330 VKNVTGALIAPATISDGG 347
>gi|290986246|ref|XP_002675835.1| predicted protein [Naegleria gruberi]
gi|284089434|gb|EFC43091.1| predicted protein [Naegleria gruberi]
Length = 820
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 105/206 (50%), Gaps = 13/206 (6%)
Query: 197 IAYLKGLQKLTLLNL------EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
I +LK +++LTLL+ EG + +S + L L+++ + +G + S+
Sbjct: 617 INFLKKMKQLTLLDFIYNIGDEGAKL-------ISEMKQLTSLDISENNIGVEGAKYISE 669
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
+ L LN+ NEI E + ++ + L SL++ IG EG ++ + L L++S+
Sbjct: 670 MKQLTSLNICRNEIGVEGVKYISEMKQLTSLDISYNKIGVEGAKYISEMKQLTSLDISEN 729
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
+G G +++S + L S+++++ I D + ++ + L SLN+ +I G+ ++
Sbjct: 730 NIGVEGAKYISEMKQLTSLDINYNKIGDEGAKYISKMKQLTSLNIRRNEIGVEGVKYISE 789
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFK 396
+ LT LD+ +I GA YL K
Sbjct: 790 MKQLTSLDISYNKIGVEGAKYLSEMK 815
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 7/192 (3%)
Query: 265 TDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLT 324
++E + LK + L L+ IGDEG ++ + L L++S+ +G G +++S +
Sbjct: 613 SNELINFLKKMKQLTLLDF-IYNIGDEGAKLISEMKQLTSLDISENNIGVEGAKYISEMK 671
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI 384
L S+N+ I ++ ++ + L SL++ +I G ++ + LT LD+ I
Sbjct: 672 QLTSLNICRNEIGVEGVKYISEMKQLTSLDISYNKIGVEGAKYISEMKQLTSLDISENNI 731
Query: 385 TDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLK 438
GA Y+ K L SL+I + D G + L SLN+ + I G++++ +K
Sbjct: 732 GVEGAKYISEMKQLTSLDINYNKIGDEGAKYISKMKQLTSLNIRRNEIGVEGVKYISEMK 791
Query: 439 NLRSLTLESCKV 450
L SL + K+
Sbjct: 792 QLTSLDISYNKI 803
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 2/211 (0%)
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
L L CP + ++ L + L L+ + D+G + S++ L L++ N I E
Sbjct: 606 LTLNKCP-SNELINFLKKMKQLTLLDF-IYNIGDEGAKLISEMKQLTSLDISENNIGVEG 663
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
++ + L SLN+ IG EG+ ++ + L L++S ++G G +++S + L S
Sbjct: 664 AKYISEMKQLTSLNICRNEIGVEGVKYISEMKQLTSLDISYNKIGVEGAKYISEMKQLTS 723
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG 388
+++S I + ++ + L SL+++ +I D G ++ + LT L++ I G
Sbjct: 724 LDISENNIGVEGAKYISEMKQLTSLDINYNKIGDEGAKYISKMKQLTSLNIRRNEIGVEG 783
Query: 389 AAYLRNFKNLRSLEICGGGLTDAGLTGLVSL 419
Y+ K L SL+I + G L +
Sbjct: 784 VKYISEMKQLTSLDISYNKIGVEGAKYLSEM 814
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 100/201 (49%), Gaps = 3/201 (1%)
Query: 136 LDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDS 195
L L +C L+N MK +L + + I D K +S + L SL IS + +
Sbjct: 606 LTLNKCP--SNELINFLKKMKQLTL-LDFIYNIGDEGAKLISEMKQLTSLDISENNIGVE 662
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 255
G Y+ +++LT LN+ + + +S + L L+++ ++ +G + S++ L
Sbjct: 663 GAKYISEMKQLTSLNICRNEIGVEGVKYISEMKQLTSLDISYNKIGVEGAKYISEMKQLT 722
Query: 256 VLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSS 315
L++ N I E ++ + L SL+++ IGDEG ++ + L L + ++G
Sbjct: 723 SLDISENNIGVEGAKYISEMKQLTSLDINYNKIGDEGAKYISKMKQLTSLNIRRNEIGVE 782
Query: 316 GLRHLSGLTNLESINLSFTGI 336
G++++S + L S+++S+ I
Sbjct: 783 GVKYISEMKQLTSLDISYNKI 803
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 90/184 (48%)
Query: 192 VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI 251
+ D G + +++LT L++ + +S + L LN+ R ++ +G + S++
Sbjct: 635 IGDEGAKLISEMKQLTSLDISENNIGVEGAKYISEMKQLTSLNICRNEIGVEGVKYISEM 694
Query: 252 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ 311
L L++ +N+I E ++ + L SL++ IG EG ++ + L L+++ +
Sbjct: 695 KQLTSLDISYNKIGVEGAKYISEMKQLTSLDISENNIGVEGAKYISEMKQLTSLDINYNK 754
Query: 312 VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 371
+G G +++S + L S+N+ I ++ ++ + L SL++ +I G L+ +
Sbjct: 755 IGDEGAKYISKMKQLTSLNIRRNEIGVEGVKYISEMKQLTSLDISYNKIGVEGAKYLSEM 814
Query: 372 TGLT 375
T
Sbjct: 815 KTKT 818
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 28/223 (12%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
LK L LDF I D G + + + LTSL NN I +G K + + L L
Sbjct: 620 LKKMKQLTLLDF--IYNIGDEGAKLISEMKQLTSLDISENN-IGVEGAKYISEMKQLTSL 676
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG 196
++ R N I +K +S + L SL IS +K+ G
Sbjct: 677 NICR-------------------------NEIGVEGVKYISEMKQLTSLDISYNKIGVEG 711
Query: 197 IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 256
Y+ +++LT L++ + +S + L L++N ++ D+G + SK+ L
Sbjct: 712 AKYISEMKQLTSLDISENNIGVEGAKYISEMKQLTSLDINYNKIGDEGAKYISKMKQLTS 771
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
LN+ NEI E + ++ + L SL++ IG EG L+ +
Sbjct: 772 LNIRRNEIGVEGVKYISEMKQLTSLDISYNKIGVEGAKYLSEM 814
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L S+D+S +++ G ++ + L SLD N+ +I D G +++ + LTSL+
Sbjct: 716 SEMKQLTSLDISENNIGVEGAKYISEMKQLTSLDINYN-KIGDEGAKYISKMKQLTSLNI 774
Query: 114 RRNNAITAQGMKAFAGLINLVKLDL 138
RR N I +G+K + + L LD+
Sbjct: 775 RR-NEIGVEGVKYISEMKQLTSLDI 798
>gi|343421695|emb|CCD18730.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 582
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 181/405 (44%), Gaps = 45/405 (11%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L +DLSG+ V D L + NL ++ C +SD + L + +L L +
Sbjct: 129 LRELDLSGTRVQDEVFYELSENPNLTKVNLRQCQGLSD--VSPLADIESLQELDLGLCRS 186
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
I +G++ A L NL L+LE+ L L LE LN+ C + D + PLS
Sbjct: 187 IN-EGVQDLAELPNLRVLNLEKVNVPSDSLFELCKSRSLEKLNLSSCKRLLD--VSPLSE 243
Query: 179 LTNLKSLQIS--CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+ L L +S CS T G++ L LQ L +LNL VT L LS SL LNL+
Sbjct: 244 IKTLVELDLSLCCSLFT--GVSELGKLQCLRILNLRNTAVTDHSLPGLSESDSLEILNLS 301
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
C+ G ++ LK + +L L+L +C +G+ +L
Sbjct: 302 SCR--------------------GLTNVSP-----LKEIKSLVQLDLSNCPALRDGIGSL 336
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL 355
L L L+L +T + + LR + +LE ++ S T +SD + ++ L++L LNL
Sbjct: 337 VALPFLCTLKLRNTAITNESLRDICESESLEELDASSCTALSD--VFHISVLNTLVELNL 394
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR--SLEICGGGLTD--- 410
G+ A+ SL L LD+ G IT+ LR +L SL C LTD
Sbjct: 395 SFCPNLVKGMEAIASLPFLRALDISGTPITNHCLRGLRKSNSLETVSLRSC-NNLTDVFY 453
Query: 411 -AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAND 454
+ ++ L+ L++ G+ L L LR L LE + AND
Sbjct: 454 LSKISTLLRLDLGCCISLQKGVGTLGKLPRLRILNLEGTR-AAND 497
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 132/277 (47%), Gaps = 29/277 (10%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
+ GL NL+ L +S ++V D L LT +NL C + + L+ + SL L+L
Sbjct: 123 IGGLKNLRELDLSGTRVQDEVFYELSENPNLTKVNLRQCQGLSD-VSPLADIESLQELDL 181
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
C+ ++G + +++ +L+VLNL + + L L +LE LNL SC + L++
Sbjct: 182 GLCRSINEGVQDLAELPNLRVLNLEKVNVPSDSLFELCKSRSLEKLNLSSC----KRLLD 237
Query: 296 LTGLCNLKCLELSDTQVGSS---GLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
++ L +K L D + S G+ L L L +NL T ++D SL L+ SL+
Sbjct: 238 VSPLSEIKTLVELDLSLCCSLFTGVSELGKLQCLRILNLRNTAVTDHSLPGLSESDSLEI 297
Query: 353 LNLDA-RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
LNL + R +T+ ++ L + L LDL S LR+ G G +
Sbjct: 298 LNLSSCRGLTN--VSPLKEIKSLVQLDL-------SNCPALRD----------GIG-SLV 337
Query: 412 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
L L +L + N+ IT+ LR + ++L L SC
Sbjct: 338 ALPFLCTLKLRNTAITNESLRDICESESLEELDASSC 374
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 10/187 (5%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLT--SLSFRRN 116
L ++ L + +T+ L + + +L+ LD + C +SD + H+ L+ L +LSF N
Sbjct: 342 LCTLKLRNTAITNESLRDICESESLEELDASSCTALSD--VFHISVLNTLVELNLSFCPN 399
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+GM+A A L L LD+ + L L+ LE+++++ CN +TD + L
Sbjct: 400 ---LVKGMEAIASLPFLRALDISGTPITNHCLRGLRKSNSLETVSLRSCNNLTD--VFYL 454
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
S ++ L L + C G+ L L +L +LNLEG + LS SL L L+
Sbjct: 455 SKISTLLRLDLGCCISLQKGVGTLGKLPRLRILNLEGTRAANDWIIGLSTSRSLAVLILS 514
Query: 237 RC-QLSD 242
C LSD
Sbjct: 515 SCLALSD 521
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 9/230 (3%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
LK+ +L LD + C + DG + L L L +L R N AIT + ++ +L +L
Sbjct: 312 LKEIKSLVQLDLSNCPALRDG-IGSLVALPFLCTLKLR-NTAITNESLRDICESESLEEL 369
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG 196
D CT + + ++ L L LN+ +C + M+ ++ L L++L IS + +T+
Sbjct: 370 DASSCTAL-SDVFHISVLNTLVELNLSFCPNLVKG-MEAIASLPFLRALDISGTPITNHC 427
Query: 197 IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 256
+ L+ L ++L C LS + +L L+L C G K+ L++
Sbjct: 428 LRGLRKSNSLETVSLRSCNNLTDVF-YLSKISTLLRLDLGCCISLQKGVGTLGKLPRLRI 486
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE 306
LNL ++ ++ L +L L L SC L +++ L N++ LE
Sbjct: 487 LNLEGTRAANDWIIGLSTSRSLAVLILSSCL----ALSDVSLLANIEPLE 532
>gi|300868028|ref|ZP_07112666.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
gi|300333948|emb|CBN57844.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
Length = 376
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 160/327 (48%), Gaps = 57/327 (17%)
Query: 125 KAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
+A A L L +LDL+ C ++ + L +L+ LN+ N +T+ + ++ L+ L++
Sbjct: 37 EAIATLTQLQRLDLD-CNQLTKVPEAIASLSQLQILNLS-NNKLTEVP-EAIASLSQLQT 93
Query: 185 LQISCSKVTD--SGIAYLKGLQKLTLLN--LEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
L + +K+T+ IA L LQKL L N L P +++++L L LNLN QL
Sbjct: 94 LNLIYNKLTEVPEAIATLTQLQKLYLSNNQLTQVP------EAIASLSQLQTLNLNFNQL 147
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG--DEGLVNLTG 298
++ E + + L+ LNL +N++T E + LT LE L L++ + E + +LT
Sbjct: 148 TE-VPEAIASLSQLRRLNLSYNQLT-EVPETIASLTQLEWLYLNNNQLRKVPEAIASLT- 204
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L+ L LSD + T + + +A LS L+SLNL
Sbjct: 205 --QLQRLSLSDNE---------------------LTAVPEA----IASLSQLRSLNLSNN 237
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD-----AGL 413
Q+T+ A+ SLT L L L G ++T+ A + + L+ L + G LT A L
Sbjct: 238 QLTELP-EAIASLTQLQELYLVGNQLTELPEA-IASLTQLQELYLVGNELTAVPEAIASL 295
Query: 414 TGLVSLNVSNSRITS-----AGLRHLK 435
T L L++S++ +T+ A L HL+
Sbjct: 296 TQLQRLSLSDNELTAVPEAIASLTHLQ 322
>gi|290975580|ref|XP_002670520.1| predicted protein [Naegleria gruberi]
gi|284084080|gb|EFC37776.1| predicted protein [Naegleria gruberi]
Length = 265
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 7/228 (3%)
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-KGLTNLESLN 282
+ L +L L + L +G + S++ L +L++ N I DE + + + + L +L+
Sbjct: 22 IGGLKNLITLQIYENHLGPNGAKSISELKQLTILDISHNRIRDEGVKSISEKMDQLTNLD 81
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
+ GI ++GLV L + NLK L D Q+ + +S + + +++S+ ++ L+
Sbjct: 82 ISFVGISEKGLVPLVEMKNLKILAFYDCQLSTKQAETISKMKQITELDISYNLTNNEILK 141
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
+ + L L L IT + ++ L LT L++ I + G Y+ K L L+
Sbjct: 142 SIGEMKQLIKLYLVKNGITSHQVEIISQLKQLTVLNISENEIRNEGVVYISGLKQLTELD 201
Query: 403 ICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
I G+ G +T L L++ N+ I LR L +K R L
Sbjct: 202 ISNNGIGYEGVLSICKMTQLTKLSIYNNPIPEEALRILDGMKQFRQLV 249
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 119/246 (48%), Gaps = 6/246 (2%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
+I DGG + GL NL +L N+ + G K+ + L L LD+ G+ ++
Sbjct: 13 RIGDGGAMLIGGLKNLITLQIYENH-LGPNGAKSISELKQLTILDISHNRIRDEGVKSIS 71
Query: 153 GLM-KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
M +L +L+I + I++ + PL + NLK L +++ + ++++T L++
Sbjct: 72 EKMDQLTNLDISFVG-ISEKGLVPLVEMKNLKILAFYDCQLSTKQAETISKMKQITELDI 130
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH 271
L S+ + L L L + ++ E S++ L VLN+ NEI +E +V+
Sbjct: 131 SYNLTNNEILKSIGEMKQLIKLYLVKNGITSHQVEIISQLKQLTVLNISENEIRNEGVVY 190
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
+ GL L L++ + GIG EG++++ + L L + + + LR L G+ +
Sbjct: 191 ISGLKQLTELDISNNGIGYEGVLSICKMTQLTKLSIYNNPIPEEALRILDGMKQFRQL-- 248
Query: 332 SFTGIS 337
TGIS
Sbjct: 249 -VTGIS 253
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 33/171 (19%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
+ D+ + I+ + L ++D+S +++ GL+ L + NL+ L F C Q+S E +
Sbjct: 62 IRDEGVKSISEKMDQLTNLDISFVGISEKGLVPLVEMKNLKILAFYDC-QLSTKQAETIS 120
Query: 104 GLSNLTSLSFRR---NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL 160
+ +T L NN I +K+ + L+KL L +
Sbjct: 121 KMKQITELDISYNLTNNEI----LKSIGEMKQLIKLYLVK-------------------- 156
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
N IT ++ +S L L L IS +++ + G+ Y+ GL++LT L++
Sbjct: 157 -----NGITSHQVEIISQLKQLTVLNISENEIRNEGVVYISGLKQLTELDI 202
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 19/131 (14%)
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
+ L ++++S I DG + GL +L +L + + G +++ L LT LD+
Sbjct: 1 MKQLTALDISSNRIGDGGAMLIGGLKNLITLQIYENHLGPNGAKSISELKQLTILDISHN 60
Query: 383 RITDSGAAYL-RNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLR 441
RI D G + L +L+I G+++ GL LV + KNL+
Sbjct: 61 RIRDEGVKSISEKMDQLTNLDISFVGISEKGLVPLVEM------------------KNLK 102
Query: 442 SLTLESCKVTA 452
L C+++
Sbjct: 103 ILAFYDCQLST 113
>gi|242004502|ref|XP_002423122.1| fbxl14, putative [Pediculus humanus corporis]
gi|212506068|gb|EEB10384.1| fbxl14, putative [Pediculus humanus corporis]
Length = 461
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 162/321 (50%), Gaps = 52/321 (16%)
Query: 61 SVDLSG-SDVTDSGLIH--LKDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRN 116
S++LSG +VTD GL H + L L+ + C Q++D L + + L+NL L
Sbjct: 161 SLNLSGCYNVTDIGLSHAFVTTLPTLTELNLSLCKQVTDTSLGRIAQYLTNLEVLELGGC 220
Query: 117 NAITAQGMKAFA-GLINLVKLDLERCTRIHG-GLVNLKGL--------MKLESLNIKWCN 166
+T G+ GL L +L+L C I G+ +L G LE L ++ C
Sbjct: 221 CNVTNTGLLLVGWGLKKLKRLNLRSCWHISDQGISHLAGPNPDVGDGNPALEYLGLQDCQ 280
Query: 167 CITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
++D ++ +S GLT LKS+ +S C +TDSG+ YL + L LNL C D++
Sbjct: 281 RLSDEALRHVSVGLTGLKSINLSFCVSITDSGLKYLAKMTSLRELNLRAC-------DNI 333
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLESLN 282
S LG + L++ G S+I SL V F ++I D+ L+H+ +GL +L+SL+
Sbjct: 334 SDLGMAY--------LAEGG----SRISSLDV---SFCDKIGDQALLHVSQGLFHLKSLS 378
Query: 283 LDSCGIGDEGLV-------NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL-SFT 334
L++C I D+G+V +L L +C +++D V + + L +L I+L +
Sbjct: 379 LNACNISDDGIVRIAITLHDLETLNIGQCWKITDRGVHTI----VDSLKHLRCIDLYGCS 434
Query: 335 GISDGSLRKLAGLSSLKSLNL 355
I+ L ++ L L +LNL
Sbjct: 435 KITTVGLERIMKLPQLTTLNL 455
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 171/348 (49%), Gaps = 59/348 (16%)
Query: 152 KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGI--AYLKGLQKLTL 208
+G+ +++ L++K S + G+ NL SL +S C VTD G+ A++ L LT
Sbjct: 135 RGIRRVQVLSLK------RSLRDVVQGIPNLDSLNLSGCYNVTDIGLSHAFVTTLPTLTE 188
Query: 209 LNLEGCP-VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
LNL C VT L ++ + NL +L GC + G L V G+
Sbjct: 189 LNLSLCKQVTDTSLGRIAQ----YLTNLEVLELG--GCCNVTNTGLLLV---GW------ 233
Query: 268 CLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGL--------CNLKCLELSDTQ-VGSSGL 317
GL L+ LNL SC I D+G+ +L G L+ L L D Q + L
Sbjct: 234 ------GLKKLKRLNLRSCWHISDQGISHLAGPNPDVGDGNPALEYLGLQDCQRLSDEAL 287
Query: 318 RHLS-GLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTS-LTG 373
RH+S GLT L+SINLSF I+D L+ LA ++SL+ LNL A I+D G+A L +
Sbjct: 288 RHVSVGLTGLKSINLSFCVSITDSGLKYLAKMTSLRELNLRACDNISDLGMAYLAEGGSR 347
Query: 374 LTHLDL-FGARITDSGAAYL-RNFKNLRSLEICGGGLTDAG-------LTGLVSLNVSN- 423
++ LD+ F +I D ++ + +L+SL + ++D G L L +LN+
Sbjct: 348 ISSLDVSFCDKIGDQALLHVSQGLFHLKSLSLNACNISDDGIVRIAITLHDLETLNIGQC 407
Query: 424 SRITSAGLRHL-KPLKNLRSLTLESC-KVTANDIKRLQSRDLPNLVSF 469
+IT G+ + LK+LR + L C K+T ++R+ LP L +
Sbjct: 408 WKITDRGVHTIVDSLKHLRCIDLYGCSKITTVGLERIMK--LPQLTTL 453
>gi|223698886|gb|ACN19164.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI G + L L+NLT L+ N
Sbjct: 13 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QI--GDITPLANLTNLTGLTLF-N 66
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 67 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 118
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 119 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 171
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 172 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 225
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 226 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 283
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 284 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 341
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 342 NVSIPNTVKNVTGALIAPATISDGG 366
>gi|440291484|gb|ELP84753.1| F-box/leucine rich repeat protein, putative [Entamoeba invadens
IP1]
Length = 691
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 176/385 (45%), Gaps = 22/385 (5%)
Query: 70 TDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA- 128
T G I++ C++L+ L N Q+S+ L+ + + NL LS + ++ + AF
Sbjct: 271 TTDGFIYIVGCNSLRYLYLNES-QVSNYHLDVIARMENLIGLSLKGCASVNDYSLNAFKN 329
Query: 129 GLIN--LVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
G I+ L +L++E H GL + + L L+I CI + PL+ L NL+ L+
Sbjct: 330 GPISYSLEELNVEDTMITHIGLQTISRIKYLRVLDIS--RCIGIKIISPLNSLKNLEILR 387
Query: 187 -----ISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL-SALGSLFYLNLNRCQL 240
++ + DS K LQ+ E P+ L S +L YL L ++
Sbjct: 388 MTGIAVNAETIKDSFREPPKYLQQFLF---ESQPIDDPILTVFCSKFPTLEYLCLKGSKI 444
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGL 299
+ G + + ++VL++ + D+C + LT LE+L L+ C I EG+ L+ L
Sbjct: 445 TSFGIQDLVILSHIRVLDISNTAVDDKCFEFISKLTYLEALYLEKCMKISGEGINVLSTL 504
Query: 300 CNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFTGISDGSL--RKLAGLSSLKSLNLD 356
+L+ L ++ +V L+ + L+ +E++ L+ G + L+ + LK L+L
Sbjct: 505 GSLRVLNMNGCAEVVIDSLKEMGELS-VETLRLNGCNKIGGKFVWKYLSEIEHLKRLDLS 563
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL 416
+ D G+ + + L L L +++D L LR +++ + + L+
Sbjct: 564 NTSVDDDGVEEMVNCKWLEVLYLIRTKVSDKAITSLLKCNLLRKIDVRESNVVNDFLSNC 623
Query: 417 VSLNVSNSRITSAGLRHLK--PLKN 439
+ + S R+ L +K P++N
Sbjct: 624 IVITKSPERVAENPLLVVKDVPIEN 648
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 124/287 (43%), Gaps = 49/287 (17%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-------VTAACLDSLSALG 228
++ L NL SL+ C K+ + + Q++ L LE CP V + C +++ LG
Sbjct: 117 VTRLINLTSLK--CGKINQACLE-----QQIQLKQLE-CPGVVPPFGVESICTNNMEKLG 168
Query: 229 SLFYLN-LNRCQLSDDGCEKFSKIG---SLKVLNLGFNEITD--ECLVHLKGLTNLESLN 282
L L +SD F K+G SL+ L++ E V + LT+LE
Sbjct: 169 MYNSLTALELVNVSDKEITSFVKLGRLTSLRKLSIASKNFVGKIETFVDISHLTSLE--- 225
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
+ +G E NL L + + Q+ SG+ + L+ L + +DG +
Sbjct: 226 ISDAPLGSEFFYNLYLFPYLVFIGFTRCQLPVSGISPQTPLSQLST--------TDGFIY 277
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSL 401
+ G +SL+ L L+ Q+++ L + + L L L G A + D L FKN
Sbjct: 278 -IVGCNSLRYLYLNESQVSNYHLDVIARMENLIGLSLKGCASVNDYS---LNAFKN---- 329
Query: 402 EICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
G ++ L LNV ++ IT GL+ + +K LR L + C
Sbjct: 330 ----GPIS----YSLEELNVEDTMITHIGLQTISRIKYLRVLDISRC 368
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 125/309 (40%), Gaps = 46/309 (14%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L LT+L+ L I+ SK I + LT L + P+ + +L L ++
Sbjct: 192 LGRLTSLRKLSIA-SKNFVGKIETFVDISHLTSLEISDAPLGSEFFYNLYLFPYLVFIGF 250
Query: 236 NRCQLSDDGCEKFSKIG---------------SLKVLNLGFNEITDECLVHLKGLTNLES 280
RCQL G + + SL+ L L +++++ L + + NL
Sbjct: 251 TRCQLPVSGISPQTPLSQLSTTDGFIYIVGCNSLRYLYLNESQVSNYHLDVIARMENLIG 310
Query: 281 LNLDSCG-IGDEGL---VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TG 335
L+L C + D L N +L+ L + DT + GL+ +S + L +++S G
Sbjct: 311 LSLKGCASVNDYSLNAFKNGPISYSLEELNVEDTMITHIGLQTISRIKYLRVLDISRCIG 370
Query: 336 ISDGSLRKLAGLSSLKSLNL--------DARQITDTGLAALTSLTGLTHLDLFGARITDS 387
I + ++ L+SLK+L + +A I D+ L LF ++ D
Sbjct: 371 I-----KIISPLNSLKNLEILRMTGIAVNAETIKDSFREPPKYLQQF----LFESQPIDD 421
Query: 388 G--AAYLRNFKNLRSLEICGGGLTDAGLTGLV------SLNVSNSRITSAGLRHLKPLKN 439
+ F L L + G +T G+ LV L++SN+ + + L
Sbjct: 422 PILTVFCSKFPTLEYLCLKGSKITSFGIQDLVILSHIRVLDISNTAVDDKCFEFISKLTY 481
Query: 440 LRSLTLESC 448
L +L LE C
Sbjct: 482 LEALYLEKC 490
>gi|326430775|gb|EGD76345.1| variable lymphocyte receptor [Salpingoeca sp. ATCC 50818]
Length = 1124
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 149/358 (41%), Gaps = 37/358 (10%)
Query: 104 GLSNLTSLSFRRNNAITAQGMKA--FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLN 161
GLS LT+L+ R + Q + A F GL +L +LDL GL +ESLN
Sbjct: 229 GLSALTTLNLNR---VPLQTLSAQTFQGLSSLTELDLSNKKIAAIPTQAFVGLSSIESLN 285
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 221
++ N ++ +S + L SL +S +T L L + L+G P+
Sbjct: 286 LQG-NPLSKLSEGAISDMPKLTSLDLSNLAITAIPARSFDNLAALGNITLQGNPIAQLTN 344
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
S S++ SL L+L+RC+L+ F+ L L L N IT L+GL+ L +
Sbjct: 345 ASFSSVPSLHTLDLSRCKLTSVPAAAFTAATRLSALTLARNAITTIAARALRGLSKLTAF 404
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 341
++ + L+ L S Q GLT+L ++NL+ T +
Sbjct: 405 DISNNP--------------LRALPASIFQ----------GLTSLATLNLAHTNCTLLPP 440
Query: 342 RKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
L L +L S++ + L L HLDL ARIT L N L L
Sbjct: 441 ALLTPLHALTSISAAGTPLRAIATGTFDGLPALQHLDLSNARITALAPHSLHNLPRLHDL 500
Query: 402 EICGGGLTDAG-------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
+ G L + L+ L +L++S RI + + NL +L L+ +TA
Sbjct: 501 ALGGNPLANISSHALGGDLSSLTTLDLSALRIAAIAPHAMSGATNLTTLLLDHNAITA 558
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 154/359 (42%), Gaps = 10/359 (2%)
Query: 75 IHLKDCSNLQSLDF--NFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLIN 132
+ D + + LDF N +S ++ L + + NN IT+ AFA L
Sbjct: 76 LQFDDGTPIAQLDFSNNLISMVSAAAFQNAVSLQHTLTALILDNNPITSIEAGAFATLTA 135
Query: 133 LVKLDLERCTRIHGGLV-NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK 191
L L++ ++ G L N+ + N + GLT+L+SL ++ +
Sbjct: 136 LNHLNMSSL-KLAGALSGNMFSTLTALLTLQLDGNQLDTLPANAFDGLTSLQSLNLANNP 194
Query: 192 VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI 251
++ +GL L L+L G P++ S + L +L LNLNR L + F +
Sbjct: 195 ISILNADTFQGLSSLLSLSLAGAPISTLSSSSFAGLSALTTLNLNRVPLQTLSAQTFQGL 254
Query: 252 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ 311
SL L+L +I GL+++ESLNL + ++ + L L+LS+
Sbjct: 255 SSLTELDLSNKKIAAIPTQAFVGLSSIESLNLQGNPLSKLSEGAISDMPKLTSLDLSNLA 314
Query: 312 VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 371
+ + R L L +I L I+ + + + SL +L+L ++T AA T+
Sbjct: 315 ITAIPARSFDNLAALGNITLQGNPIAQLTNASFSSVPSLHTLDLSRCKLTSVPAAAFTAA 374
Query: 372 TGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNS 424
T L+ L L IT A LR L + +I L GLT L +LN++++
Sbjct: 375 TRLSALTLARNAITTIAARALRGLSKLTAFDISNNPLRALPASIFQGLTSLATLNLAHT 433
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 169/384 (44%), Gaps = 23/384 (5%)
Query: 79 DCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL 138
D S+L +LD + ++I+ + G +NLT+L +NAITA FAGL L L +
Sbjct: 518 DLSSLTTLDLS-ALRIAAIAPHAMSGATNLTTL-LLDHNAITALAADTFAGLSRLATLRI 575
Query: 139 ---ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDS 195
+ GG + GL L +L++ + + +G+++L+S+ ++ +
Sbjct: 576 TSNPALATLAGGAFD--GLSALATLDLSRL-PVAELPSHVFAGMSSLQSVVLTGVDLHTL 632
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 255
L + ++L G +++ + AL +L L+L+ L+ + F+ L
Sbjct: 633 QPNAFANLSHVAAISLAGMSLSSLPSHAFGALPALTSLSLDNNPLASLNTDTFAGPLPLL 692
Query: 256 VLNLGFNE-ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS 314
+ IT G T + SLNL I GL + L L+ +
Sbjct: 693 TTLDLSSHGITALPPRTFSGATAVRSLNLAHNAITTIAPDAFLGLSSATQLVLAGNPIAH 752
Query: 315 SGLRHLSGLTNLESINLS---FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 371
+GL L S++LS TGI GS +GL++L +L +D + + T L
Sbjct: 753 VSAGSFAGLGALTSLDLSTSALTGIVSGSF---SGLANLTTLTVDTPHLRHLFPGSFTGL 809
Query: 372 TGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA--------GLTGLVSLNVSN 423
+ L HL + +T L ++R+L + L A GL+ LV+L++SN
Sbjct: 810 SSLHHLSIANTCVTALPDGVLSPLVHVRTLSLRNSSLAGAAVSTLTFDGLSQLVALDLSN 869
Query: 424 SRITSAGLRHLKPLKNLRSLTLES 447
+ +T+ G + +PL R+L L S
Sbjct: 870 NDMTAIGDKAFRPLSATRTLNLSS 893
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 130/318 (40%), Gaps = 20/318 (6%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKV--TDSGIAYLKGLQKLTLLNLEGCPVT---AAC 220
N IT +GL+ L +L+I+ + T +G A+ GL L L+L PV +
Sbjct: 554 NAITALAADTFAGLSRLATLRITSNPALATLAGGAF-DGLSALATLDLSRLPVAELPSHV 612
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
+S+L S+ ++ L + S + ++ + + + + L LT S
Sbjct: 613 FAGMSSLQSVVLTGVDLHTLQPNAFANLSHVAAISLAGMSLSSLPSHAFGALPALT---S 669
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSFTGISDG 339
L+LD+ + G L + + + R SG T + S+NL+ I+
Sbjct: 670 LSLDNNPLASLNTDTFAGPLPLLTTLDLSSHGITALPPRTFSGATAVRSLNLAHNAITTI 729
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
+ GLSS L L I + L LT LDL + +T + NL
Sbjct: 730 APDAFLGLSSATQLVLAGNPIAHVSAGSFAGLGALTSLDLSTSALTGIVSGSFSGLANLT 789
Query: 400 SLEI--------CGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
+L + G T GL+ L L+++N+ +T+ L PL ++R+L+L + +
Sbjct: 790 TLTVDTPHLRHLFPGSFT--GLSSLHHLSIANTCVTALPDGVLSPLVHVRTLSLRNSSLA 847
Query: 452 ANDIKRLQSRDLPNLVSF 469
+ L L LV+
Sbjct: 848 GAAVSTLTFDGLSQLVAL 865
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 132/284 (46%), Gaps = 24/284 (8%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
IT + SG T ++SL ++ + +T GL T L L G P+ S + L
Sbjct: 702 ITALPPRTFSGATAVRSLNLAHNAITTIAPDAFLGLSSATQLVLAGNPIAHVSAGSFAGL 761
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL-DSC 286
G+L L+L+ L+ FS + +L L + + GL++L L++ ++C
Sbjct: 762 GALTSLDLSTSALTGIVSGSFSGLANLTTLTVDTPHLRHLFPGSFTGLSSLHHLSIANTC 821
Query: 287 GIG-DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS--GLTNLESINLS---FTGISDGS 340
+G+ L+ L +++ L L ++ + + + L+ GL+ L +++LS T I D +
Sbjct: 822 VTALPDGV--LSPLVHVRTLSLRNSSLAGAAVSTLTFDGLSQLVALDLSNNDMTAIGDKA 879
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL--FGARITDSGAAYLRNFKNL 398
R L S+ ++LNL + + + AA G+ L + + + A L + +L
Sbjct: 880 FRPL---SATRTLNLSSNALGNFTQAASHVFKGMKALQVLDLSSNPFSTPPANLASLSSL 936
Query: 399 RSLEICGG-------GLTDAGLTGLVSLNVSNSRITSAGLRHLK 435
RS +C G GL D +G++ LN S + + + L HL+
Sbjct: 937 RS--VCMGDVPLDCCGLEDLRDSGVLDLNCSVAAMCAMPL-HLR 977
>gi|421898414|ref|ZP_16328780.1| lrr-gala family type III effector protein (gala 2) [Ralstonia
solanacearum MolK2]
gi|206589620|emb|CAQ36581.1| lrr-gala family type III effector protein (gala 2) [Ralstonia
solanacearum MolK2]
Length = 1051
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 180/411 (43%), Gaps = 30/411 (7%)
Query: 58 SLLSVDLSG---SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
S+ +DLSG S V+++GL L L+SLD + +I D ++ L ++LTSL+
Sbjct: 648 SVRHLDLSGCTGSAVSEAGLAVLARLP-LESLDLS-GTRIGDREVQALASSTSLTSLNLS 705
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N I G +A L L++ G+ L L SL ++ I ++ +
Sbjct: 706 -GNRIGNAGARALGRNTVLTALNVSANPIGDAGVQALADSQSLTSLELRGIG-IGEAGIA 763
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L+ T L+SL IS + +++ A L Q L L C +T L+ + SL L
Sbjct: 764 ALASNTVLRSLDISSNDLSEQSAAELARNQTLASLKANACGLTNGMAQQLARIRSLRTLE 823
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
+ + D G ++ SL+ LNL N IT + L L+ L SL++ G GD G +
Sbjct: 824 VGSNSIGDTGVLAIARNASLRTLNLSHNPITLQGLRPLELSRTLTSLDVSGIGCGDRGAL 883
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
L+ L L+L +GS+G + L+ L S++L I + + LA L SLN
Sbjct: 884 LLSKNRALTSLKLGFNGIGSAGAQGLAANRTLISLDLRGNTIDVDAAKALANTGCLTSLN 943
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT 414
+ ++ D +AL LT LD+ R++ A L AG
Sbjct: 944 VSDCKLDDEAASALAESLTLTSLDVSVNRLSGQAARAL------------------AGNA 985
Query: 415 GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 465
L SLN+S++ I G + L S +L AN I +R L N
Sbjct: 986 TLTSLNISHNHIGPDGAQALA-----ESPSLTFLDARANGIGEAGARALEN 1031
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 150/349 (42%), Gaps = 28/349 (8%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
+ D+ + +AS +SL S++LSG+ + ++G L + L +L+ + I D G++ L
Sbjct: 685 IGDREVQALASS-TSLTSLNLSGNRIGNAGARALGRNTVLTALNVS-ANPIGDAGVQALA 742
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
+LTSL R I G+ A A L LD+ L L SL
Sbjct: 743 DSQSLTSLELR-GIGIGEAGIAALASNTVLRSLDISSNDLSEQSAAELARNQTLASLKAN 801
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
C +T+ + L+ + +L++L++ + + D+G+ + L LNL P+T L
Sbjct: 802 ACG-LTNGMAQQLARIRSLRTLEVGSNSIGDTGVLAIARNASLRTLNLSHNPITLQGLRP 860
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI---------TDECLVHL-- 272
L +L L+++ D G SK +L L LGFN I + L+ L
Sbjct: 861 LELSRTLTSLDVSGIGCGDRGALLLSKNRALTSLKLGFNGIGSAGAQGLAANRTLISLDL 920
Query: 273 ----------KGLTN---LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
K L N L SLN+ C + DE L L L++S ++ R
Sbjct: 921 RGNTIDVDAAKALANTGCLTSLNVSDCKLDDEAASALAESLTLTSLDVSVNRLSGQAARA 980
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
L+G L S+N+S I + LA SL L+ A I + G AL
Sbjct: 981 LAGNATLTSLNISHNHIGPDGAQALAESPSLTFLDARANGIGEAGARAL 1029
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 131/291 (45%), Gaps = 16/291 (5%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
G+ + + +AS + L S+D+S +D+++ L L SL N C +++G + L
Sbjct: 756 GIGEAGIAALASN-TVLRSLDISSNDLSEQSAAELARNQTLASLKANAC-GLTNGMAQQL 813
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE---- 158
+ +L +L +N+I G+ A A +L L+L + L+GL LE
Sbjct: 814 ARIRSLRTLEVG-SNSIGDTGVLAIARNASLRTLNLSHNP------ITLQGLRPLELSRT 866
Query: 159 --SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV 216
SL++ C D LS L SL++ + + +G L + L L+L G +
Sbjct: 867 LTSLDVSGIGC-GDRGALLLSKNRALTSLKLGFNGIGSAGAQGLAANRTLISLDLRGNTI 925
Query: 217 TAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT 276
+L+ G L LN++ C+L D+ ++ +L L++ N ++ + L G
Sbjct: 926 DVDAAKALANTGCLTSLNVSDCKLDDEAASALAESLTLTSLDVSVNRLSGQAARALAGNA 985
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
L SLN+ IG +G L +L L+ +G +G R L T ++
Sbjct: 986 TLTSLNISHNHIGPDGAQALAESPSLTFLDARANGIGEAGARALENNTRMQ 1036
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 86/187 (45%), Gaps = 25/187 (13%)
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
E + +L GL LESLN+ IGD+G L +L+ L ++ +G++G R L+ L
Sbjct: 145 EAIAYLAGLP-LESLNVAGADIGDDGARLLAANPSLRALNAANGGIGAAGARALAESPVL 203
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL------- 379
S++L+ GI D R LAG SL SL + +TD G AL LT LDL
Sbjct: 204 ASLDLTRNGIGDEGARALAGSRSLTSLAVLNCLVTDVGARALAGNGTLTALDLGNLITET 263
Query: 380 -----------FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLV------SLNVS 422
IT GA L ++L SL I G D G+ L SLNV+
Sbjct: 264 GNELEQAGYDRTANEITARGAWALAQNRSLTSLSIQGNLCGDGGVQALARNRTLTSLNVA 323
Query: 423 NSRITSA 429
+ +T A
Sbjct: 324 YTDMTPA 330
>gi|283779449|ref|YP_003370204.1| hypothetical protein Psta_1669 [Pirellula staleyi DSM 6068]
gi|283437902|gb|ADB16344.1| hypothetical protein Psta_1669 [Pirellula staleyi DSM 6068]
Length = 633
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 72/138 (52%)
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
L+LG +TD+ L L L+ L+L + D GL L L L L L T + S+
Sbjct: 478 LSLGRTTVTDQGLAQLGQFKRLKWLDLSLTKVTDTGLEQLDQLTQLNQLFLEGTAISSAS 537
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
+ ++ L NLE ++LS I+D L K+A L LK L L +TD GLA L SL L
Sbjct: 538 IPAIARLRNLEELDLSKVNIADDDLAKIATLKQLKVLYLVGTPVTDAGLAKLVSLQNLEM 597
Query: 377 LDLFGARITDSGAAYLRN 394
LDL G R++ A L++
Sbjct: 598 LDLRGTRVSADAAEKLKS 615
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 78/147 (53%)
Query: 259 LGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
+GF +++D+ L+ +L+L + D+GL L LK L+LS T+V +GL
Sbjct: 456 VGFLDVSDQDLLACVSPATTINLSLGRTTVTDQGLAQLGQFKRLKWLDLSLTKVTDTGLE 515
Query: 319 HLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 378
L LT L + L T IS S+ +A L +L+ L+L I D LA + +L L L
Sbjct: 516 QLDQLTQLNQLFLEGTAISSASIPAIARLRNLEELDLSKVNIADDDLAKIATLKQLKVLY 575
Query: 379 LFGARITDSGAAYLRNFKNLRSLEICG 405
L G +TD+G A L + +NL L++ G
Sbjct: 576 LVGTPVTDAGLAKLVSLQNLEMLDLRG 602
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 66/118 (55%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
+TD + L LK L +S +KVTD+G+ L L +L L LEG +++A + +++
Sbjct: 483 TTVTDQGLAQLGQFKRLKWLDLSLTKVTDTGLEQLDQLTQLNQLFLEGTAISSASIPAIA 542
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
L +L L+L++ ++DD K + + LKVL L +TD L L L NLE L+L
Sbjct: 543 RLRNLEELDLSKVNIADDDLAKIATLKQLKVLYLVGTPVTDAGLAKLVSLQNLEMLDL 600
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 27/168 (16%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++ +++ L + VTD GL L L+ LD + +++D GLE L L+ L L F
Sbjct: 473 ATTINLSLGRTTVTDQGLAQLGQFKRLKWLDLSLT-KVTDTGLEQLDQLTQLNQL-FLEG 530
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
AI++ + A A L NL +LDL + VN I D D+ +
Sbjct: 531 TAISSASIPAIARLRNLEELDLSK--------VN-----------------IADDDLAKI 565
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
+ L LK L + + VTD+G+A L LQ L +L+L G V+A + L
Sbjct: 566 ATLKQLKVLYLVGTPVTDAGLAKLVSLQNLEMLDLRGTRVSADAAEKL 613
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 70/145 (48%), Gaps = 2/145 (1%)
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
L+L VT L L L +L+L+ +++D G E+ ++ L L L I+
Sbjct: 478 LSLGRTTVTDQGLAQLGQFKRLKWLDLSLTKVTDTGLEQLDQLTQLNQLFLEGTAISSAS 537
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
+ + L NLE L+L I D+ L + L LK L L T V +GL L L NLE
Sbjct: 538 IPAIARLRNLEELDLSKVNIADDDLAKIATLKQLKVLYLVGTPVTDAGLAKLVSLQNLEM 597
Query: 329 INLSFTGISDGSLRKLAGLSSLKSL 353
++L T +S + KL S +KSL
Sbjct: 598 LDLRGTRVSADAAEKLK--SRIKSL 620
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%)
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L+L R ++D G + + LK L+L ++TD L L LT L L L+ I
Sbjct: 478 LSLGRTTVTDQGLAQLGQFKRLKWLDLSLTKVTDTGLEQLDQLTQLNQLFLEGTAISSAS 537
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
+ + L NL+ L+LS + L ++ L L+ + L T ++D L KL L +L+
Sbjct: 538 IPAIARLRNLEELDLSKVNIADDDLAKIATLKQLKVLYLVGTPVTDAGLAKLVSLQNLEM 597
Query: 353 LNLDARQIT 361
L+L +++
Sbjct: 598 LDLRGTRVS 606
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 30/159 (18%)
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
F +SD L ++ +L+L +TD GLA L L LDL ++TD+G L
Sbjct: 458 FLDVSDQDLLACVSPATTINLSLGRTTVTDQGLAQLGQFKRLKWLDLSLTKVTDTGLEQL 517
Query: 393 RNFKNLRSLEICGGGLTDAGLTGLVSL-----------NVSN------------------ 423
L L + G ++ A + + L N+++
Sbjct: 518 DQLTQLNQLFLEGTAISSASIPAIARLRNLEELDLSKVNIADDDLAKIATLKQLKVLYLV 577
Query: 424 -SRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSR 461
+ +T AGL L L+NL L L +V+A+ ++L+SR
Sbjct: 578 GTPVTDAGLAKLVSLQNLEMLDLRGTRVSADAAEKLKSR 616
>gi|449530965|ref|XP_004172462.1| PREDICTED: LOW QUALITY PROTEIN: F-box/LRR-repeat protein 3-like
[Cucumis sativus]
Length = 661
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 197/411 (47%), Gaps = 26/411 (6%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI 92
L+ LCL + D + +IA++ L S+DLS +T+ L + +L+ L C
Sbjct: 187 LKLLCLNWCLHITDLGVGLIATKCKELRSLDLSFLPITEKCLPTILQLQHLEELILEECH 246
Query: 93 QISDGGLEHLRGLSNLTSLSF---RRNNAITAQGMKA-FAGLINLVKLDLERCTRIHGGL 148
I D GLE L+ SL F R +I+ G+ + G +L KL+L + I +
Sbjct: 247 GIDDEGLEALQRNCKRNSLKFLNLSRCPSISHSGLSSLIIGSEDLQKLNLSYGSSITTDM 306
Query: 149 VN-LKGLMKLESLNIKWCNCITDSDMKPLSGL-TNLKSLQIS-CSKVTDSGIAYL-KGLQ 204
L L+S+ + C+ +T S +KPL +LK L +S C+ VTD ++ L + +
Sbjct: 307 AKCLHNFSGLQSIKLDCCS-LTTSGVKPLXNWRASLKELSLSKCAGVTDECLSILVQKHK 365
Query: 205 KLTLLNLEGC-PVTAACLDSL-SALGSLFYLNLNRCQLSDDGCEKFSKIGS----LKVLN 258
+L L++ C +T ++S+ S+ L L + C L E + IG L+ L+
Sbjct: 366 QLRKLDITCCRKITYGSINSITSSCSFLVSLKMESCSLVPR--EAYVLIGQRCPYLEELD 423
Query: 259 LGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLC-NLKCLEL-SDTQVGSS 315
L NEI +E L + + L L L C I D+GL ++ C +K L+L T +
Sbjct: 424 LTDNEIDNEGLKSISKCSRLSVLKLGICLNINDDGLCHIASACPKIKELDLYRSTGITDR 483
Query: 316 GLRHLS-GLTNLESINLSFT-GISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALT-SL 371
G+ + G LE IN+++ I+D SL L+ +LK+L + I+ GL+A+
Sbjct: 484 GIAATAGGCPALEMINIAYNDKITDSSLISLSKCLNLKALEIRGCCCISSIGLSAIAMGC 543
Query: 372 TGLTHLDLFG-ARITDSGAAYLRNF-KNLRSLEICGGGLTDAGLTGLVSLN 420
LT LD+ + D G L F NL+ + + +TD GL L S+N
Sbjct: 544 KQLTVLDIKKCVNVNDDGMLPLAQFSHNLKQINLSYCSVTDVGLLSLASIN 594
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 176/397 (44%), Gaps = 55/397 (13%)
Query: 59 LLSVDLS-GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR-GLSNLTSLSFRRN 116
L+ ++LS G +TDS + L + NL+ L + C I+D G+ + G L L
Sbjct: 136 LVEINLSNGVALTDSVIKVLAEAKNLEKLWLSRCKSITDMGIGCVAVGCKKLKLLCLNWC 195
Query: 117 NAITAQGMKAFAGLIN-LVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
IT G+ A L LDL L + L LE L ++ C+ I D ++
Sbjct: 196 LHITDLGVGLIATKCKELRSLDLSFLPITEKCLPTILQLQHLEELILEECHGIDDEGLEA 255
Query: 176 LS---GLTNLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLE-GCPVT---AACLDSLSA 226
L +LK L +S C ++ SG++ L G + L LNL G +T A CL + S
Sbjct: 256 LQRNCKRNSLKFLNLSRCPSISHSGLSSLIIGSEDLQKLNLSYGSSITTDMAKCLHNFSG 315
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKI-GSLKVLNLGFNE-ITDECLVHL----KGLTNLE- 279
L S + L+ C L+ G + SLK L+L +TDECL L K L L+
Sbjct: 316 LQS---IKLDCCSLTTSGVKPLXNWRASLKELSLSKCAGVTDECLSILVQKHKQLRKLDI 372
Query: 280 ----------------------SLNLDSCG-IGDEGLVNLTGLCN-LKCLELSDTQVGSS 315
SL ++SC + E V + C L+ L+L+D ++ +
Sbjct: 373 TCCRKITYGSINSITSSCSFLVSLKMESCSLVPREAYVLIGQRCPYLEELDLTDNEIDNE 432
Query: 316 GLRHLSGLTNLESINLSFT-GISDGSLRKLA-GLSSLKSLNL-DARQITDTGLAALTSLT 372
GL+ +S + L + L I+D L +A +K L+L + ITD G+AA
Sbjct: 433 GLKSISKCSRLSVLKLGICLNINDDGLCHIASACPKIKELDLYRSTGITDRGIAATAG-- 490
Query: 373 GLTHLDL----FGARITDSGAAYLRNFKNLRSLEICG 405
G L++ + +ITDS L NL++LEI G
Sbjct: 491 GCPALEMINIAYNDKITDSSLISLSKCLNLKALEIRG 527
>gi|299066813|emb|CBJ38007.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
solanacearum CMR15]
Length = 457
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 144/334 (43%), Gaps = 19/334 (5%)
Query: 133 LVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNC----ITDSDMKPLSGLTNLKSLQIS 188
L +LDL +C G + G+ L L + N I + L+ L SL +S
Sbjct: 65 LKELDLSQCR----GPITAAGMAHLSRLPLVRLNVRNKRIGAKGARLLANHPTLTSLNVS 120
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
+++ G L G +LT LN+ G + +L+A +L L+++ ++ D+G
Sbjct: 121 NNRIGPEGAQALAGNMRLTTLNVSGNRLGVEEAKALAANQTLRSLDVSDNRIGDEGARVL 180
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
+ L L+ N I + L L SL + IGD G++ L L L +
Sbjct: 181 AACTQLTTLDANRNGIGVDGATALAACPTLRSLGIGGNAIGDAGVLALAANARLTTLNVE 240
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
T VG+ G+ L+ L + L GI + LA + L +L+L +I G AL
Sbjct: 241 STGVGAVGVGALAASKALTWLRLDGNGIGNAGATALAASTRLTTLHLARNKIGAEGAQAL 300
Query: 369 TSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVS 422
+ T LT LDL +I D+G L L SL + L D A L +L++S
Sbjct: 301 AANTKLTTLDLGYNKIGDTGVRALAANATLVSLTVRRNDLKDESAVILAASRTLTTLDLS 360
Query: 423 NSRITSAGLRHLKPLKNLRSLTLESCKVTANDIK 456
+ I G + L + TL + V++NDIK
Sbjct: 361 GNGIEDQGAKALAA-----NPTLTTLDVSSNDIK 389
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 138/324 (42%), Gaps = 28/324 (8%)
Query: 81 SNLQSLDFNFCI-QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE 139
++L+ LD + C I+ G+ HL L L L+ R N I A+G + A L L++
Sbjct: 63 ASLKELDLSQCRGPITAAGMAHLSRLP-LVRLNVR-NKRIGAKGARLLANHPTLTSLNVS 120
Query: 140 RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY 199
G L G M+L +LN+ N + + K L+ L+SL +S +++ D G
Sbjct: 121 NNRIGPEGAQALAGNMRLTTLNVS-GNRLGVEEAKALAANQTLRSLDVSDNRIGDEGARV 179
Query: 200 LKGLQKLTLLN-------LEGCPVTAACLD-----------------SLSALGSLFYLNL 235
L +LT L+ ++G AAC +L+A L LN+
Sbjct: 180 LAACTQLTTLDANRNGIGVDGATALAACPTLRSLGIGGNAIGDAGVLALAANARLTTLNV 239
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
+ G + +L L L N I + L T L +L+L IG EG
Sbjct: 240 ESTGVGAVGVGALAASKALTWLRLDGNGIGNAGATALAASTRLTTLHLARNKIGAEGAQA 299
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L L L+L ++G +G+R L+ L S+ + + D S LA +L +L+L
Sbjct: 300 LAANTKLTTLDLGYNKIGDTGVRALAANATLVSLTVRRNDLKDESAVILAASRTLTTLDL 359
Query: 356 DARQITDTGLAALTSLTGLTHLDL 379
I D G AL + LT LD+
Sbjct: 360 SGNGIEDQGAKALAANPTLTTLDV 383
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 162/377 (42%), Gaps = 38/377 (10%)
Query: 57 SSLLSVDLSG--SDVTDSGLIHLKDCSNLQSLDFNF-CIQISDGGLEHLRGLSNLTSLSF 113
+SL +DLS +T +G+ HL S L + N +I G L LTSL+
Sbjct: 63 ASLKELDLSQCRGPITAAGMAHL---SRLPLVRLNVRNKRIGAKGARLLANHPTLTSLNV 119
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGL---MKLESLNIKWCNCITD 170
NN I +G +A AG + L L++ R+ G+ K L L SL++ N I D
Sbjct: 120 S-NNRIGPEGAQALAGNMRLTTLNVS-GNRL--GVEEAKALAANQTLRSLDVS-DNRIGD 174
Query: 171 SDMKPLSGLTNL------------------------KSLQISCSKVTDSGIAYLKGLQKL 206
+ L+ T L +SL I + + D+G+ L +L
Sbjct: 175 EGARVLAACTQLTTLDANRNGIGVDGATALAACPTLRSLGIGGNAIGDAGVLALAANARL 234
Query: 207 TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
T LN+E V A + +L+A +L +L L+ + + G + L L+L N+I
Sbjct: 235 TTLNVESTGVGAVGVGALAASKALTWLRLDGNGIGNAGATALAASTRLTTLHLARNKIGA 294
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
E L T L +L+L IGD G+ L L L + + L+ L
Sbjct: 295 EGAQALAANTKLTTLDLGYNKIGDTGVRALAANATLVSLTVRRNDLKDESAVILAASRTL 354
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
+++LS GI D + LA +L +L++ + I + G AL + L LDL R+ +
Sbjct: 355 TTLDLSGNGIEDQGAKALAANPTLTTLDVSSNDIKNAGARALAANARLVWLDLRHNRMEE 414
Query: 387 SGAAYLRNFKNLRSLEI 403
+G L + L SL +
Sbjct: 415 AGTRALLANRTLSSLGV 431
>gi|56797881|emb|CAH04902.1| internalin A [Listeria monocytogenes]
Length = 773
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 181/385 (47%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 71 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 124
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 125 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 176
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT+L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 177 ANLTSLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILANLDEL 229
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L ++I++ L L GLT L L L + I + +
Sbjct: 230 SLNGNQLKDIGT--LASLTNLTDLDLANDQISN--LAPLSGLTKLTELKLGANQISN--I 283
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 284 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 341
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 342 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKV 399
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 400 NVSIPNTVKNVTGALIAPATISDGG 424
>gi|150371858|dbj|BAF65718.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 180/385 (46%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL+ L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DLDPLKNLTNLNRLELSSNTI--SDISALSGLISLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LGSLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I + D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATIRDGG 451
>gi|434399050|ref|YP_007133054.1| leucine-rich repeat-containing protein [Stanieria cyanosphaera PCC
7437]
gi|428270147|gb|AFZ36088.1| leucine-rich repeat-containing protein [Stanieria cyanosphaera PCC
7437]
Length = 842
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 188/456 (41%), Gaps = 120/456 (26%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
+I D L+ ++ L+NLTSL+ N + + F N + L L+
Sbjct: 108 EIDDDNLDRIKSLTNLTSLNLSTPNVLIYG--RTFHYTHNHI-----------TDLKPLR 154
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD------------------ 194
L KLE L + N I D+ PL LTNL+ L + S + D
Sbjct: 155 SLAKLEKLELS-ANPI--KDISPLQSLTNLRELNLKHSPIEDLTPLKSLINLTSLSVRVY 211
Query: 195 ------------------------SGIAYLKGLQKLTLLNLEGCPVT---AACLDSLSAL 227
+ I++L+ L KLT L+L V A+ L +L +L
Sbjct: 212 DAKNLIPLKYLTNLTQLSVRASQLNNISFLQSLTKLTHLSLRSIKVQVNRASDLSALQSL 271
Query: 228 GSLFYLNL---------------NRCQLS------------------------DDGCEKF 248
+L +L L N QL+ ++ F
Sbjct: 272 TNLTHLTLNGYGTIDLSVLQSLTNLTQLTLKGFSINNISLLGAFPKLTSLCLIENEINDF 331
Query: 249 SKIGSLKVLN---LGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
S +G+L L L N+I+D L+ L+ LTNL SL L+ I D L L L NL L
Sbjct: 332 SSLGALTKLTNLILNKNQISD--LIPLQSLTNLTSLALNKNQISD--LTPLQSLTNLTSL 387
Query: 306 ELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD-TG 364
L+ Q+ S L L LTNL S+ L+ ISD L L L++L SL L QI+D T
Sbjct: 388 ALNKNQI--SDLTPLQSLTNLTSLTLNKNQISD--LTPLQSLTNLTSLCLVKNQISDLTP 443
Query: 365 LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLN 420
L +LT+LT LT+ + +ITD L++ L +L + ++D LT L L
Sbjct: 444 LQSLTNLTNLTYTNSHSTQITDFTP--LQSLTKLTNLTLNKNEISDFTPLISLTNLTFLY 501
Query: 421 VSNSRI-TSAGLRHLKPLK-NLRSLTLESCKVTAND 454
+ S T + L L NLRSL L + ++ D
Sbjct: 502 LRRSWWSTIERINQLNSLPNNLRSLALSTQRICRTD 537
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 134/308 (43%), Gaps = 75/308 (24%)
Query: 72 SGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLI 131
S L L+ +NL L N I L+ L L+ LT F NN I+ G AF L
Sbjct: 263 SDLSALQSLTNLTHLTLNGYGTIDLSVLQSLTNLTQLTLKGFSINN-ISLLG--AFPKLT 319
Query: 132 NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK 191
+L ++ E +L L KL +L + N SD+ PL LTNL SL ++ ++
Sbjct: 320 SLCLIENEI-----NDFSSLGALTKLTNLIL---NKNQISDLIPLQSLTNLTSLALNKNQ 371
Query: 192 VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI 251
++D L L +L +L L LN+ Q+SD
Sbjct: 372 ISD--------------------------LTPLQSLTNLTSLALNKNQISD--------- 396
Query: 252 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD----EGLVNLTGLCNLKCLEL 307
L L+ LTNL SL L+ I D + L NLT LC +K ++
Sbjct: 397 -----------------LTPLQSLTNLTSLTLNKNQISDLTPLQSLTNLTSLCLVKN-QI 438
Query: 308 SDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD-TGLA 366
SD + L+ L+ LTNL N T I+D + L L+ L +L L+ +I+D T L
Sbjct: 439 SDL----TPLQSLTNLTNLTYTNSHSTQITDFT--PLQSLTKLTNLTLNKNEISDFTPLI 492
Query: 367 ALTSLTGL 374
+LT+LT L
Sbjct: 493 SLTNLTFL 500
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 121/260 (46%), Gaps = 28/260 (10%)
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
D + L L NL+ L S S + + ++ L+ L KLT L+L C + LD + +L +L
Sbjct: 66 DFRLLQCLPNLQQLNGSGS-WSGNDLSVLQSLTKLTTLSLLDCEIDDDNLDRIKSLTNLT 124
Query: 232 YLNLNRCQLSDDG------------CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
LNL+ + G + + L+ L L N I D + L+ LTNL
Sbjct: 125 SLNLSTPNVLIYGRTFHYTHNHITDLKPLRSLAKLEKLELSANPIKD--ISPLQSLTNLR 182
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD- 338
LNL I D L L L NL LS + L L LTNL +++ + +++
Sbjct: 183 ELNLKHSPIED--LTPLKSLINLTS--LSVRVYDAKNLIPLKYLTNLTQLSVRASQLNNI 238
Query: 339 ---GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF 395
SL KL L SL+S+ + + +D L+AL SLT LTHL L G D + L++
Sbjct: 239 SFLQSLTKLTHL-SLRSIKVQVNRASD--LSALQSLTNLTHLTLNGYGTID--LSVLQSL 293
Query: 396 KNLRSLEICGGGLTDAGLTG 415
NL L + G + + L G
Sbjct: 294 TNLTQLTLKGFSINNISLLG 313
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 76/171 (44%), Gaps = 25/171 (14%)
Query: 309 DTQVGSSGLRHLSGLTNLESINLS------------FTGISDGSLRKLAGLSSLKSLNLD 356
D ++ L + LTNL S+NLS +T L+ L L+ L+ L L
Sbjct: 106 DCEIDDDNLDRIKSLTNLTSLNLSTPNVLIYGRTFHYTHNHITDLKPLRSLAKLEKLELS 165
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI----CGGGLTDAG 412
A I D ++ L SLT L L+L + I D L++ NL SL + +
Sbjct: 166 ANPIKD--ISPLQSLTNLRELNLKHSPIEDLTP--LKSLINLTSLSVRVYDAKNLIPLKY 221
Query: 413 LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAN---DIKRLQS 460
LT L L+V S++ + L+ L L L+L S KV N D+ LQS
Sbjct: 222 LTNLTQLSVRASQLNNISF--LQSLTKLTHLSLRSIKVQVNRASDLSALQS 270
>gi|354478681|ref|XP_003501543.1| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit [Cricetulus griseus]
Length = 603
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 180/442 (40%), Gaps = 62/442 (14%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLR-----GLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
NL SLDF + + L L GL NL L RN + + F NL
Sbjct: 95 QNLSSLDF---LNLQGSWLNSLEPQALLGLQNLYHLHLERN-LLRSLAAGLFTHTPNLAS 150
Query: 136 LDL--ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
L L R+ GL +GL L LN+ W + + DM GL NL+ L ++ +K
Sbjct: 151 LSLGNNLLGRLEDGL--FQGLGHLWDLNLGWNSLVVLPDMV-FQGLGNLRELVLAGNK-- 205
Query: 194 DSGIAYLKG-----------------------------LQKLTLLNLEGCPVTAACLDSL 224
+AYL+ L +L L L+ VTA +
Sbjct: 206 ---LAYLQPSLFCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNFVTAVAPGAF 262
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
+ +L +L+L+ +++ + F + L VL L N IT K L LE L L
Sbjct: 263 LGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLG 322
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
I G GL L+ L L+D Q+ + SGL N+ +NLS + + R
Sbjct: 323 HNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKMGAFSGLFNVAVMNLSGNCLRNLPERVF 382
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
GLS L SL+L+ + L T L+GL L L G I+ + L L L++
Sbjct: 383 QGLSKLHSLHLEHSCLGRIRLHTFTGLSGLRRLFLRGNSISITEEQSLAGLSELLELDLT 442
Query: 405 GGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA------ 452
LT GL L L +SN+R+++ L PL+ + L + ++ A
Sbjct: 443 ANQLTHLPRRLFQGLGQLEYLLLSNNRLSALSEDVLSPLQRVFWLDISHNRLEALSEGLF 502
Query: 453 NDIKRLQSRDLPN--LVSFRPE 472
+ + RL+ L N L +F P+
Sbjct: 503 SPLGRLRYLSLRNNSLQTFSPQ 524
>gi|290979178|ref|XP_002672311.1| predicted protein [Naegleria gruberi]
gi|284085887|gb|EFC39567.1| predicted protein [Naegleria gruberi]
Length = 347
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 239 QLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLE------------------ 279
+L+D+ + F K+ L L + + EI + +V LK LT L
Sbjct: 84 KLNDEWFDVFEKMNQLTELQIDWVREIDLKRIVDLKQLTKLSVCSCTEDVEQVKLIGEMK 143
Query: 280 ---SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
L + S GDEG + G+ L LE+ ++G G + L L L+ + +S +
Sbjct: 144 QLTELKISSNKFGDEGAKIIGGMTQLTKLEIKSNRIGKLGAKALCNLKELKELRISENAL 203
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
+ ++ L L +L +D Q+ G A++ + LT+L + +I +GA + K
Sbjct: 204 GASGAKSISQLKQLTTLTIDYNQLGPEGAKAISEIPNLTNLSICSDQIGAAGAKSISKMK 263
Query: 397 NLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
L +L G + D G + L SL++S + I G + + LKNLR L + + +
Sbjct: 264 QLLTLSADGNAIGDKGAKAIGEMKQLTSLHLSFNHIGFEGAKAISELKNLRYLNMTTNPL 323
Query: 451 TANDIKRLQSRDLPNLV 467
++ + LQ+ LP L+
Sbjct: 324 SSEGAQLLQNMKLPKLI 340
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 143/333 (42%), Gaps = 42/333 (12%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVT---DSGLIHLKDCSNLQSLDFNFCIQISDGGLE 100
++ +W++VI + S LS S V + G +H + F +++D +
Sbjct: 39 ISKQWLEVIKQR--SKLSACFSNPKVNRVMEKGFLHY-----FVKIKFKSVYKLNDEWFD 91
Query: 101 HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVK-LDLERCTRIHGGLVNLKGLMKLES 159
++ LT L I+ V+ +DL+R +V+LK L KL
Sbjct: 92 VFEKMNQLTELQ------------------IDWVREIDLKR-------IVDLKQLTKLSV 126
Query: 160 LNIKWCNCITDSDMKPLSG-LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
C+C D + L G + L L+IS +K D G + G+ +LT L ++ +
Sbjct: 127 -----CSCTEDVEQVKLIGEMKQLTELKISSNKFGDEGAKIIGGMTQLTKLEIKSNRIGK 181
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
+L L L L ++ L G + S++ L L + +N++ E + + NL
Sbjct: 182 LGAKALCNLKELKELRISENALGASGAKSISQLKQLTTLTIDYNQLGPEGAKAISEIPNL 241
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
+L++ S IG G +++ + L L +G G + + + L S++LSF I
Sbjct: 242 TNLSICSDQIGAAGAKSISKMKQLLTLSADGNAIGDKGAKAIGEMKQLTSLHLSFNHIGF 301
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 371
+ ++ L +L+ LN+ ++ G L ++
Sbjct: 302 EGAKAISELKNLRYLNMTTNPLSSEGAQLLQNM 334
>gi|334116578|ref|ZP_08490670.1| leucine-rich repeat-containing protein [Microcoleus vaginatus
FGP-2]
gi|333461398|gb|EGK90003.1| leucine-rich repeat-containing protein [Microcoleus vaginatus
FGP-2]
Length = 576
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 108/196 (55%), Gaps = 17/196 (8%)
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
+DD E + S+ L L ++ ITD + L+ LTNL +LN ++ I D + +L L
Sbjct: 42 TDDAQEAEQILSSMTELALSYDHITD--ISFLRWLTNLTTLNFENNKITD--ISSLGSLT 97
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
NL L LS Q+ + + L LTNL +++LS+ I D S L L++L LNL+ I
Sbjct: 98 NLTRLNLSYNQI--TDISFLGSLTNLTTLDLSYNRIIDIS--SLGSLTNLTRLNLNINTI 153
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG----LTGL 416
TD +++L SLT LT LDL +ITD + L + NL L++ +TD LT L
Sbjct: 154 TD--ISSLGSLTNLTRLDLLSNQITDLSS--LGSLTNLTRLDLSSNPITDINALRKLTNL 209
Query: 417 VSLNV-SNSRITSAGL 431
L++ SN+RIT+ +
Sbjct: 210 TILDILSNTRITNISV 225
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 65/136 (47%), Gaps = 28/136 (20%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIH--GGLVNLK----- 152
LR L+NLT+L+F NN IT + + L NL +L+L + T I G L NL
Sbjct: 71 LRWLTNLTTLNFE-NNKIT--DISSLGSLTNLTRLNLSYNQITDISFLGSLTNLTTLDLS 127
Query: 153 -----------GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLK 201
L L LN+ N T +D+ L LTNL L + +++TD ++ L
Sbjct: 128 YNRIIDISSLGSLTNLTRLNL---NINTITDISSLGSLTNLTRLDLLSNQITD--LSSLG 182
Query: 202 GLQKLTLLNLEGCPVT 217
L LT L+L P+T
Sbjct: 183 SLTNLTRLDLSSNPIT 198
>gi|431892162|gb|ELK02609.1| F-box/LRR-repeat protein 14 [Pteropus alecto]
Length = 412
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 160/324 (49%), Gaps = 41/324 (12%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEISSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-K 273
LS +G + R + +GC +G ++ ++TD L H+ +
Sbjct: 180 R-------HLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTDLSLKHISR 225
Query: 274 GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLSGLTNLESINL 331
GLT L LNL C GI D GL++L+ + +L+ L L S + +G+ HL+ + S+ L
Sbjct: 226 GLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLA----MGSLRL 281
Query: 332 SFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALTS-LTGLTHLDLFG-ARITDS 387
S +SD + R + + L++LN+ +ITD GL + L+ LT +DL+G RIT
Sbjct: 282 SGLDVSDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKR 341
Query: 388 GAAYLRNFKNLRSLEICGGGLTDA 411
G + L+ L + +TD+
Sbjct: 342 GLERITQLPCLKVLNLGLWQMTDS 365
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 153/306 (50%), Gaps = 45/306 (14%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ +S+L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEISSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLT 297
+SD G + +GSL++ L +++D+ + + + + L +LN+ C I D+GL +
Sbjct: 266 ISDTGIMHLA-MGSLRLSGL---DVSDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIA 321
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA 357
HLS LT ++ T I+ L ++ L LK LNL
Sbjct: 322 --------------------EHLSQLTGIDLYGC--TRITKRGLERITQLPCLKVLNLGL 359
Query: 358 RQITDT 363
Q+TD+
Sbjct: 360 WQMTDS 365
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 95/200 (47%), Gaps = 45/200 (22%)
Query: 272 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 322
++G+ N+ESLNL C G+G + ++ L L C +++D+ +G ++L G
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEISSLRALNLSLCKQITDSSLGRIA-QYLKG 144
Query: 323 LTNLE---SINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLT------ 372
L LE N++ TG+ L GL LKSLNL + R ++D G+ L +T
Sbjct: 145 LEVLELGGCSNITNTGL----LLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEG 200
Query: 373 --GLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN-SRITS 428
GL L L ++TD ++ GLTGL LN+S I+
Sbjct: 201 CLGLEQLTLQDCQKLTDLSLKHI-----------------SRGLTGLRLLNLSFCGGISD 243
Query: 429 AGLRHLKPLKNLRSLTLESC 448
AGL HL + +LRSL L SC
Sbjct: 244 AGLLHLSHMGSLRSLNLRSC 263
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 54/201 (26%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 AGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
A G ++L L++ D + + + L++L I
Sbjct: 275 A-----------------------MGSLRLSGLDVS-----DDGINRMVRQMHGLRTLNI 306
Query: 188 -SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGC 245
C ++TD G+ + + L +LT ++L GC +++ G
Sbjct: 307 GQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITKRGL 343
Query: 246 EKFSKIGSLKVLNLGFNEITD 266
E+ +++ LKVLNLG ++TD
Sbjct: 344 ERITQLPCLKVLNLGLWQMTD 364
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
Query: 56 GSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFR 114
G LL++ G ++D+GL+HL +L+SL+ C ISD G+ HL G L+ L
Sbjct: 229 GLRLLNLSFCGG-ISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLD-- 285
Query: 115 RNNAITAQGM-KAFAGLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDS 171
++ G+ + + L L++ +C RI + L + L +L +++ C IT
Sbjct: 286 ----VSDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKR 341
Query: 172 DMKPLSGLTNLKSLQISCSKVTDS 195
++ ++ L LK L + ++TDS
Sbjct: 342 GLERITQLPCLKVLNLGLWQMTDS 365
>gi|290971663|ref|XP_002668605.1| predicted protein [Naegleria gruberi]
gi|284082078|gb|EFC35861.1| predicted protein [Naegleria gruberi]
Length = 968
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 88/177 (49%)
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNL 302
+G + S++ L L++G N+I DE + + L SL + IGDEG+ ++ + L
Sbjct: 776 EGAKSISEMKQLTSLDIGENQIGDEGAKSISEMKQLTSLTISGNSIGDEGVKSIRKMKQL 835
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
+S + G +G + +S + L S+++S+ I D + ++ L L SL + I
Sbjct: 836 TSFNISYNETGVAGAKFISEMKQLTSLDISYNEIGDEGAKSISELKQLTSLTISGNSIGV 895
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSL 419
G +++ + LT LD+ +I D GA + K L+SL I + D G ++ +
Sbjct: 896 EGAKSISEMKQLTLLDIGENQIGDEGAKSISELKQLKSLTISENQIGDEGAKFIIGM 952
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 101/205 (49%), Gaps = 2/205 (0%)
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
F+ LI+ K ++E + G ++ + +L SL+I N I D K +S + L SL
Sbjct: 758 FSKLISEEKEEMEHSIGVEGA-KSISEMKQLTSLDIG-ENQIGDEGAKSISEMKQLTSLT 815
Query: 187 ISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCE 246
IS + + D G+ ++ +++LT N+ A +S + L L+++ ++ D+G +
Sbjct: 816 ISGNSIGDEGVKSIRKMKQLTSFNISYNETGVAGAKFISEMKQLTSLDISYNEIGDEGAK 875
Query: 247 KFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE 306
S++ L L + N I E + + L L++ IGDEG +++ L LK L
Sbjct: 876 SISELKQLTSLTISGNSIGVEGAKSISEMKQLTLLDIGENQIGDEGAKSISELKQLKSLT 935
Query: 307 LSDTQVGSSGLRHLSGLTNLESINL 331
+S+ Q+G G + + G+ S L
Sbjct: 936 ISENQIGDEGAKFIIGMKQYGSFKL 960
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 6/169 (3%)
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
IG EG +++ + L L++ + Q+G G + +S + L S+ +S I D ++ + +
Sbjct: 773 IGVEGAKSISEMKQLTSLDIGENQIGDEGAKSISEMKQLTSLTISGNSIGDEGVKSIRKM 832
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG-- 405
L S N+ + G ++ + LT LD+ I D GA + K L SL I G
Sbjct: 833 KQLTSFNISYNETGVAGAKFISEMKQLTSLDISYNEIGDEGAKSISELKQLTSLTISGNS 892
Query: 406 ----GGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
G + + + L L++ ++I G + + LK L+SLT+ ++
Sbjct: 893 IGVEGAKSISEMKQLTLLDIGENQIGDEGAKSISELKQLKSLTISENQI 941
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%)
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
S+S + L L++ Q+ D+G + S++ L L + N I DE + ++ + L S N
Sbjct: 780 SISEMKQLTSLDIGENQIGDEGAKSISEMKQLTSLTISGNSIGDEGVKSIRKMKQLTSFN 839
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
+ G G ++ + L L++S ++G G + +S L L S+ +S I +
Sbjct: 840 ISYNETGVAGAKFISEMKQLTSLDISYNEIGDEGAKSISELKQLTSLTISGNSIGVEGAK 899
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
++ + L L++ QI D G +++ L L L + +I D GA ++ K S +
Sbjct: 900 SISEMKQLTLLDIGENQIGDEGAKSISELKQLKSLTISENQIGDEGAKFIIGMKQYGSFK 959
Query: 403 I 403
+
Sbjct: 960 L 960
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 24/191 (12%)
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K +S + L SL I +++ D G + +++LT L + G + + S+ + L
Sbjct: 779 KSISEMKQLTSLDIGENQIGDEGAKSISEMKQLTSLTISGNSIGDEGVKSIRKMKQLTSF 838
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
N++ + G + S++ L L++ +NEI DE + L L SL + IG EG
Sbjct: 839 NISYNETGVAGAKFISEMKQLTSLDISYNEIGDEGAKSISELKQLTSLTISGNSIGVEGA 898
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
+++ + L L++ + Q+G G + +S L LKSL
Sbjct: 899 KSISEMKQLTLLDIGENQIGDEGAKSISEL------------------------KQLKSL 934
Query: 354 NLDARQITDTG 364
+ QI D G
Sbjct: 935 TISENQIGDEG 945
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 6/141 (4%)
Query: 306 ELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL 365
E + +G G + +S + L S+++ I D + ++ + L SL + I D G+
Sbjct: 767 EEMEHSIGVEGAKSISEMKQLTSLDIGENQIGDEGAKSISEMKQLTSLTISGNSIGDEGV 826
Query: 366 AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSL 419
++ + LT ++ +GA ++ K L SL+I + D G L L SL
Sbjct: 827 KSIRKMKQLTSFNISYNETGVAGAKFISEMKQLTSLDISYNEIGDEGAKSISELKQLTSL 886
Query: 420 NVSNSRITSAGLRHLKPLKNL 440
+S + I G + + +K L
Sbjct: 887 TISGNSIGVEGAKSISEMKQL 907
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 8/163 (4%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L S+ +SG+ + D G+ ++ L S + ++ + G + + + LTSL
Sbjct: 806 SEMKQLTSLTISGNSIGDEGVKSIRKMKQLTSFNISYN-ETGVAGAKFISEMKQLTSLDI 864
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
N I +G K+ + L L L + + G ++ + +L L+I N I D
Sbjct: 865 SYNE-IGDEGAKSISELKQLTSLTISGNSIGVEGAKSISEMKQLTLLDIG-ENQIGDEGA 922
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQ-----KLTLLNL 211
K +S L LKSL IS +++ D G ++ G++ KL L+NL
Sbjct: 923 KSISELKQLKSLTISENQIGDEGAKFIIGMKQYGSFKLRLVNL 965
>gi|443316011|ref|ZP_21045475.1| Leucine Rich Repeat (LRR)-containing protein [Leptolyngbya sp. PCC
6406]
gi|442784393|gb|ELR94269.1| Leucine Rich Repeat (LRR)-containing protein [Leptolyngbya sp. PCC
6406]
Length = 437
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 165/338 (48%), Gaps = 39/338 (11%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L S+ LSG+ ++D + L + L+SL F QI++ ++ L GL NLT LS N
Sbjct: 102 TNLTSLVLSGNQISD--IQPLASLTKLESL-FLESNQITN--IQSLGGLHNLTWLSLSGN 156
Query: 117 NAITAQGMKAFAGL----------INLVKL----DLERCTRIHGGLVNLKGLMKLESLNI 162
+ Q + GL +++ L +LER + +V + L LE L
Sbjct: 157 QVVDVQPLSNLTGLEWLFLDDNQIVDVAPLATLQNLERLLLSYNQIVEIGALSALEKLQN 216
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
+ N D++PLSGL NL L++ ++V + I L L+ L L L+ + +
Sbjct: 217 LYLNGNQIEDVQPLSGLRNLAWLELKENQVMN--IQPLADLENLRWLGLDDNQIVD--VQ 272
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
L+AL +L L LN Q++D + + +L+ L LG N+I D ++ L+ LE N
Sbjct: 273 PLAALSTLKNLYLNGNQITD--VSSLAALTNLESLVLGDNQIVD-----IQSLSLLE--N 323
Query: 283 LDSCGIGDEGLVN---LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
L + +VN L+ L L+ L L+D Q+ ++ L+ LTNL + LS I D
Sbjct: 324 LTFLVLSGNQIVNVSPLSALVRLERLGLNDNQI--QDVQPLATLTNLSVLVLSNNQIVD- 380
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
+ LA L ++ L+LD QI D + S GL HL
Sbjct: 381 -VEPLAALENVGLLSLDHNQIVDIQPLSQLSRLGLLHL 417
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 155/309 (50%), Gaps = 40/309 (12%)
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
D++PLS LTNL SL +S ++++D I L L KL L LE +T + SL L +L
Sbjct: 94 DVRPLSTLTNLTSLVLSGNQISD--IQPLASLTKLESLFLESNQITN--IQSLGGLHNLT 149
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC-----------------LVHLKG 274
+L+L+ Q+ D + S + L+ L L N+I D +V +
Sbjct: 150 WLSLSGNQVVD--VQPLSNLTGLEWLFLDDNQIVDVAPLATLQNLERLLLSYNQIVEIGA 207
Query: 275 LTNLESL-NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
L+ LE L NL G E + L+GL NL LEL + QV ++ L+ L NL + L
Sbjct: 208 LSALEKLQNLYLNGNQIEDVQPLSGLRNLAWLELKENQV--MNIQPLADLENLRWLGLDD 265
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
I D ++ LA LS+LK+L L+ QITD +++L +LT L L L +I D + L
Sbjct: 266 NQIVD--VQPLAALSTLKNLYLNGNQITD--VSSLAALTNLESLVLGDNQIVDIQSLSL- 320
Query: 394 NFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
+NL L + G + + + L L L +++++I ++ L L NL L L + +
Sbjct: 321 -LENLTFLVLSGNQIVNVSPLSALVRLERLGLNDNQIQD--VQPLATLTNLSVLVLSNNQ 377
Query: 450 VTANDIKRL 458
+ D++ L
Sbjct: 378 IV--DVEPL 384
>gi|366165824|ref|ZP_09465579.1| internalin A [Acetivibrio cellulolyticus CD2]
Length = 614
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 164/358 (45%), Gaps = 59/358 (16%)
Query: 83 LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT 142
L+ LD N+ + S L L GL NLT L+ NA + + + L NL L L
Sbjct: 160 LEYLDLNYYVTTS-SDLICLEGLDNLTELNL---NAYKIRDLSHLSNLSNLQILKLN--- 212
Query: 143 RIHGGLVNLKGLMKLESLN--IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD-SGIAY 199
+G + +K L LE L+ I + N +T+ + +NL +L+I + D SGI+
Sbjct: 213 --NGPDIKMKPLCGLEKLHTLIVYSNLLTNLNNYSELSASNLSTLEILSGNLNDISGISN 270
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLF---YLNL------------NRCQLSD-- 242
+K L KLTL ++ L +SA+G+L YLNL N LS+
Sbjct: 271 IKSLTKLTL-------ISNINLSDISAIGNLTNLSYLNLCNNNIVDTTPIGNLTNLSELY 323
Query: 243 ------DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
F+ + +L L L N I D + L LT L L +D+ I V++
Sbjct: 324 LYENNISDVSSFASLTNLSTLYLHNNNIVD--VSSLSNLTKLSDLTIDNNKI-----VDI 376
Query: 297 TGLCNLK--CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
LCNLK C++ S + + +S +TN+ S+NL+ I D + L+ L+ L +LN
Sbjct: 377 APLCNLKLGCIDFSFNNI--VDISPISKVTNIYSVNLNNNNIVD--ISPLSNLTMLYTLN 432
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
L ITD + L +L ++HL+L ITD A L N + L + +TD
Sbjct: 433 LSNNLITD--ITPLGNLNSVSHLNLINNPITDVSA--LGNMSRVFQLWLSKTKVTDVS 486
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 155/327 (47%), Gaps = 45/327 (13%)
Query: 138 LERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGI 197
LE+C R G K+ I D+K NL+SL++ S GI
Sbjct: 92 LEKCIRYATG---------------KFTGDIYYGDVK------NLESLEVD-SAFDFEGI 129
Query: 198 AYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
+L L+KLT ++E + L ++S+L L YL+LN + + +L L
Sbjct: 130 QFLTSLKKLTAKSIEES--YSLDLSAISSLKQLEYLDLNYYVTTSSDLICLEGLDNLTEL 187
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGL 317
NL +I D L HL L+NL+ L L++ G + + + LC L+ +L V S+ L
Sbjct: 188 NLNAYKIRD--LSHLSNLSNLQILKLNN---GPD--IKMKPLCGLE--KLHTLIVYSNLL 238
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN--LDARQITDTGLAALTSLTGLT 375
+L+ + L + NLS I G+L ++G+S++KSL I + ++A+ +LT L+
Sbjct: 239 TNLNNYSELSASNLSTLEILSGNLNDISGISNIKSLTKLTLISNINLSDISAIGNLTNLS 298
Query: 376 HLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGL 431
+L+L I D+ + N NL L + ++D A LT L +L + N+ I +
Sbjct: 299 YLNLCNNNIVDTTP--IGNLTNLSELYLYENNISDVSSFASLTNLSTLYLHNNNI--VDV 354
Query: 432 RHLKPLKNLRSLTLESCKVTANDIKRL 458
L L L LT+++ K+ DI L
Sbjct: 355 SSLSNLTKLSDLTIDNNKIV--DIAPL 379
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 130/302 (43%), Gaps = 53/302 (17%)
Query: 150 NLKGLMKLESLNIKWCNCITDS---DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKL 206
+ +G+ L SL I +S D+ +S L L+ L ++ T S + L+GL L
Sbjct: 125 DFEGIQFLTSLKKLTAKSIEESYSLDLSAISSLKQLEYLDLNYYVTTSSDLICLEGLDNL 184
Query: 207 TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
T LNL + L LS L +L L LN +G +
Sbjct: 185 TELNLNAYKIRD--LSHLSNLSNLQILKLN------NGPD-------------------- 216
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
+ +K L LE L+ + + L NL L LS ++ S L +SG++N+
Sbjct: 217 ---IKMKPLCGLEKLH--TLIVYSNLLTNLNNYSELSASNLSTLEILSGNLNDISGISNI 271
Query: 327 ESINLSFTGISDGSLRKLAG---LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGAR 383
+S+ T IS+ +L ++ L++L LNL I DT + +LT L+ L L+
Sbjct: 272 KSLT-KLTLISNINLSDISAIGNLTNLSYLNLCNNNIVDT--TPIGNLTNLSELYLYENN 328
Query: 384 ITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKN 439
I+D + + NL +L + + D + LT L L + N++I + PL N
Sbjct: 329 ISDVSS--FASLTNLSTLYLHNNNIVDVSSLSNLTKLSDLTIDNNKIVD-----IAPLCN 381
Query: 440 LR 441
L+
Sbjct: 382 LK 383
>gi|159486717|ref|XP_001701384.1| hypothetical protein CHLREDRAFT_153692 [Chlamydomonas reinhardtii]
gi|158271686|gb|EDO97500.1| predicted protein [Chlamydomonas reinhardtii]
Length = 293
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 82/162 (50%), Gaps = 42/162 (25%)
Query: 348 SSLKSLNLDARQI-------TDTGLAALTSLTGLTHLDLFGARITDSGAAYL---RNFKN 397
S+L LNL ++ TD L ++ L+ LT LD+FG R+TD+GAA L +
Sbjct: 116 STLTHLNLTYTKVCVLRGTLTDAALRHVSRLSCLTALDVFGCRLTDAGAAVLGGAPALRG 175
Query: 398 LRSLEICGGGLTDAG------LTGLVSLNVS--------------------------NSR 425
LRSLE CGGG+TDAG LT L SLN+S ++
Sbjct: 176 LRSLECCGGGITDAGALCLARLTALTSLNLSQNPRLGDAGVRSLAAHLAELQVLSLNHTN 235
Query: 426 ITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLV 467
+TSA LR L L LRSL L +V+ + RL++R P+L+
Sbjct: 236 VTSACLRELAQLPWLRSLALAGSRVSEAGVARLKARAHPDLI 277
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT-LLNLEGC-----PVTAACL 221
+TD+ ++ +S L+ L +L + ++TD+G A L G L L +LE C A CL
Sbjct: 135 LTDAALRHVSRLSCLTALDVFGCRLTDAGAAVLGGAPALRGLRSLECCGGGITDAGALCL 194
Query: 222 DSLSALGSLFYLNLNR-CQLSDDGCEKF-SKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
L+AL S LNL++ +L D G + + L+VL+L +T CL L L L
Sbjct: 195 ARLTALTS---LNLSQNPRLGDAGVRSLAAHLAELQVLSLNHTNVTSACLRELAQLPWLR 251
Query: 280 SLNLDSCGIGDEGLVNL 296
SL L + + G+ L
Sbjct: 252 SLALAGSRVSEAGVARL 268
>gi|406835554|ref|ZP_11095148.1| ribonuclease inhibitor [Schlesneria paludicola DSM 18645]
Length = 392
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 133/293 (45%), Gaps = 25/293 (8%)
Query: 190 SKVTDSGIAYL----KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGC 245
S++ DS I L +GL ++T +N + VT+A S+S L L L L+ +++++ C
Sbjct: 72 SEINDSAITQLTSLSEGLNEITEINADFSTVTSAAFASISKLSKLRQLRLSSTRVTNEAC 131
Query: 246 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
EK +++ +L+VL L + D + L L+NL+SL L C + G + L+ L
Sbjct: 132 EKIAELPALEVLILSDTVVDDVGVAALSRLSNLKSLELSRCHLTRAGFQAIGAFPALEYL 191
Query: 306 ELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL 365
E+ T + L + L S+ LS I+D L L L ++ L + I GL
Sbjct: 192 EIRRTNLDDVSLDLVCNAKTLVSLRLSNNPITDQGLDALGKLPGIEVLEFNETGIHGWGL 251
Query: 366 AALTSLTG---LTHLDLFGARITDSGAAYLRNFKNLRSL---EICGGGLTDAGLTGLVS- 418
A G L L LF + GA + NFK++ L EI L D GL +V
Sbjct: 252 AHAQKRGGGKNLKELSLFKCPLDGMGAKAIGNFKSVEKLVLGEIP--QLDDEGLMTMVRG 309
Query: 419 ------LNVSN--SRITSAGLRHLKPLKNLRSLTLESCKVTAND----IKRLQ 459
LN S S + G + L K+L L + C +D IK+++
Sbjct: 310 MKNLKYLNCSKTPSLFGTLGFKALLGSKDLEELHIGECSRIGDDAVPFIKKMK 362
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 139/309 (44%), Gaps = 38/309 (12%)
Query: 152 KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
+GL ++ +N + + +T + +S L+ L+ L++S ++VT+ + L L +L L
Sbjct: 87 EGLNEITEINADF-STVTSAAFASISKLSKLRQLRLSSTRVTNEACEKIAELPALEVLIL 145
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH 271
V + +LS L +L L L+RC L+ G + +L+ L + + D L
Sbjct: 146 SDTVVDDVGVAALSRLSNLKSLELSRCHLTRAGFQAIGAFPALEYLEIRRTNLDDVSLDL 205
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS---GLTNLES 328
+ L SL L + I D+GL L L ++ LE ++T + GL H G NL+
Sbjct: 206 VCNAKTLVSLRLSNNPITDQGLDALGKLPGIEVLEFNETGIHGWGLAHAQKRGGGKNLKE 265
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLD--------- 378
++L + + + S++ L L + Q+ D GL +T + G+ +L
Sbjct: 266 LSLFKCPLDGMGAKAIGNFKSVEKLVLGEIPQLDDEGL--MTMVRGMKNLKYLNCSKTPS 323
Query: 379 LFG---------------------ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLV 417
LFG +RI D +++ KNL+ L + G ++ G+ L
Sbjct: 324 LFGTLGFKALLGSKDLEELHIGECSRIGDDAVPFIKKMKNLKILRVHGTSISARGMAEL- 382
Query: 418 SLNVSNSRI 426
+L + +++I
Sbjct: 383 ALALPDTKI 391
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 83/189 (43%), Gaps = 10/189 (5%)
Query: 283 LDSCGIGDEGLVNLT----GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
L I D + LT GL + + + V S+ +S L+ L + LS T +++
Sbjct: 69 LKPSEINDSAITQLTSLSEGLNEITEINADFSTVTSAAFASISKLSKLRQLRLSSTRVTN 128
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 398
+ K+A L +L+ L L + D G+AAL+ L+ L L+L +T +G + F L
Sbjct: 129 EACEKIAELPALEVLILSDTVVDDVGVAALSRLSNLKSLELSRCHLTRAGFQAIGAFPAL 188
Query: 399 RSLEICGGGLTDAGL------TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
LEI L D L LVSL +SN+ IT GL L L + L +
Sbjct: 189 EYLEIRRTNLDDVSLDLVCNAKTLVSLRLSNNPITDQGLDALGKLPGIEVLEFNETGIHG 248
Query: 453 NDIKRLQSR 461
+ Q R
Sbjct: 249 WGLAHAQKR 257
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 51/274 (18%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
LS + V D G+ L SNL+SL+ + C ++ G + + L L RR N
Sbjct: 145 LSDTVVDDVGVAALSRLSNLKSLELSRC-HLTRAGFQAIGAFPALEYLEIRRTN------ 197
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
++ V LDL + N K L+ L N N ITD + L L ++
Sbjct: 198 -------LDDVSLDL---------VCNAKTLVSLRLSN----NPITDQGLDALGKLPGIE 237
Query: 184 SLQISCSKVTDSGIAYLK---GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC-Q 239
L+ + + + G+A+ + G + L L+L CP+ ++ S+ L L Q
Sbjct: 238 VLEFNETGIHGWGLAHAQKRGGGKNLKELSLFKCPLDGMGAKAIGNFKSVEKLVLGEIPQ 297
Query: 240 LSDDGCEKFSK-IGSLKVLN----------LGFNEITDECLVHLKGLTNLESLNLDSCG- 287
L D+G + + +LK LN LGF L G +LE L++ C
Sbjct: 298 LDDEGLMTMVRGMKNLKYLNCSKTPSLFGTLGFK--------ALLGSKDLEELHIGECSR 349
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS 321
IGD+ + + + NLK L + T + + G+ L+
Sbjct: 350 IGDDAVPFIKKMKNLKILRVHGTSISARGMAELA 383
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 19/224 (8%)
Query: 14 LVYSRC-LTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDS 72
L SRC LT +A + + ++D +D++ + +L+S+ LS + +TD
Sbjct: 167 LELSRCHLTRAGFQAIGAFPALEYLEIRRTNLDDVSLDLVCN-AKTLVSLRLSNNPITDQ 225
Query: 73 GLIHLKDCSNLQSLDFNFCIQISDGGLEHLR---GLSNLTSLSFRRNNAITAQGMKAFAG 129
GL L ++ L+FN I GL H + G NL LS + + G KA
Sbjct: 226 GLDALGKLPGIEVLEFNET-GIHGWGLAHAQKRGGGKNLKELSLFK-CPLDGMGAKAIGN 283
Query: 130 LINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDM------KPLSGLTNL 182
++ KL L ++ GL+ + MK N+K+ NC + K L G +L
Sbjct: 284 FKSVEKLVLGEIPQLDDEGLMTMVRGMK----NLKYLNCSKTPSLFGTLGFKALLGSKDL 339
Query: 183 KSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
+ L I CS++ D + ++K ++ L +L + G ++A + L+
Sbjct: 340 EELHIGECSRIGDDAVPFIKKMKNLKILRVHGTSISARGMAELA 383
>gi|324506357|gb|ADY42718.1| Leucine-rich repeat-containing protein 15 [Ascaris suum]
Length = 649
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 128/291 (43%), Gaps = 20/291 (6%)
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
LK LQ+ + + L +L +L+L G + L L L L ++ QLS
Sbjct: 151 LKVLQLRNNILKGIEPMMFNDLDRLEILDLGGNKIAQITTGQLDKLKDLETLIISDNQLS 210
Query: 242 --DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
+DG F +G+LK LNL N++T+ KGL NLE+LNL S I + +
Sbjct: 211 SIEDGA--FQALGNLKTLNLANNKLTNITKGTFKGLNNLETLNLQSNNIINVDWSAFVHM 268
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 359
NL+ L++ + + L L L L N S + + SLR L LS L Q
Sbjct: 269 RNLRTLDIGNNHITQVELHRLQSLEKLYLNNNSIQSLKNISLRDLINLSVLSFDRNSITQ 328
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSL 419
I D L +L L L + +I G L L+ L + LT +S
Sbjct: 329 IADGDLHSLAESVRLNLLSVAANKIAKIGPRALEPIHQLKVLSLENNQLTS------LSS 382
Query: 420 NVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFR 470
N N+ ++ L+PL+ L+SL L + N+I+R+ DL +L S +
Sbjct: 383 NDGNANVS-----FLRPLRKLKSLFL-----STNNIQRIDENDLSSLTSLK 423
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 108/256 (42%), Gaps = 50/256 (19%)
Query: 63 DLSGSDVTDSGLIHLKDCS-----NLQSLDF--NFCIQISDGGLEHLRGLSNLTSLSFRR 115
DL ++D+ L ++D + NL++L+ N I+ G +GL+NL +L+ +
Sbjct: 198 DLETLIISDNQLSSIEDGAFQALGNLKTLNLANNKLTNITKGTF---KGLNNLETLNLQS 254
Query: 116 NNAITAQGMKAFAGLINLVKLD----------LERCTRIHGGLVNLKGLMKLESLNIK-- 163
NN I AF + NL LD L R + +N + L++++++
Sbjct: 255 NNIINVD-WSAFVHMRNLRTLDIGNNHITQVELHRLQSLEKLYLNNNSIQSLKNISLRDL 313
Query: 164 -----------WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
I D D+ L+ L L ++ +K+ G L+ + +L +L+LE
Sbjct: 314 INLSVLSFDRNSITQIADGDLHSLAESVRLNLLSVAANKIAKIGPRALEPIHQLKVLSLE 373
Query: 213 GCPVTA----------ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
+T+ + L L L SLF L+ N Q D+ S + SLK L L N
Sbjct: 374 NNQLTSLSSNDGNANVSFLRPLRKLKSLF-LSTNNIQRIDEN--DLSSLTSLKTLALDHN 430
Query: 263 EITDECLVHLKGLTNL 278
EI +H K L
Sbjct: 431 EIEK---IHGKAFVGL 443
>gi|29823175|emb|CAD15502.2| probable lrr-gala family type III effector protein (gala 4)
[Ralstonia solanacearum GMI1000]
Length = 462
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 123/299 (41%), Gaps = 55/299 (18%)
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
+T +GIA L L L L++ GC + A L++ +L LN++R + DDG +
Sbjct: 155 PITSAGIARLLAL-PLERLDVSGCGLDAESARLLASHPTLTVLNISRNAIGDDGAAALAA 213
Query: 251 IGSLKVLNLGFNEITD---ECLVHLKGLTNLE---------------------SLNLDSC 286
L LN+G N I+D LV GLT L+ L+ C
Sbjct: 214 NPKLTSLNVGRNGISDAGARALVACAGLTKLDISDNRIGDAGARALAGSAKLNKLDAGDC 273
Query: 287 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN---------------- 330
GIG EG L L L+L ++G G L+ L S+N
Sbjct: 274 GIGPEGARALAASQTLTRLDLRYNEIGVGGAEALAANPRLTSLNVCGNALGSAGAALLAA 333
Query: 331 --------LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
+ GI + R L ++L L++ I + G AL + T LT LD+
Sbjct: 334 SAALTELDIGNNGIGNAGARALGANATLVKLSVANNGIEEAGARALAASTTLTALDIGSN 393
Query: 383 RITDSGAAYLRNFKNLRSLEICGGGLTDAGL------TGLVSLNVSNSRITSAGLRHLK 435
RI D+GA L L +L+ + D G T L +LNV +RI AG+R L+
Sbjct: 394 RIGDAGAQALAANDTLVTLDASANWIGDPGALALADNTRLATLNVGANRIGEAGMRALE 452
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 1/233 (0%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 215
KL SLN+ N I+D+ + L L L IS +++ D+G L G KL L+ C
Sbjct: 216 KLTSLNVG-RNGISDAGARALVACAGLTKLDISDNRIGDAGARALAGSAKLNKLDAGDCG 274
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
+ +L+A +L L+L ++ G E + L LN+ N + L
Sbjct: 275 IGPEGARALAASQTLTRLDLRYNEIGVGGAEALAANPRLTSLNVCGNALGSAGAALLAAS 334
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 335
L L++ + GIG+ G L L L +++ + +G R L+ T L ++++
Sbjct: 335 AALTELDIGNNGIGNAGARALGANATLVKLSVANNGIEEAGARALAASTTLTALDIGSNR 394
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG 388
I D + LA +L +L+ A I D G AL T L L++ RI ++G
Sbjct: 395 IGDAGAQALAANDTLVTLDASANWIGDPGALALADNTRLATLNVGANRIGEAG 447
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 98/251 (39%), Gaps = 29/251 (11%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+ L +D+S + + D+G L + L LD C
Sbjct: 239 AGLTKLDISDNRIGDAGARALAGSAKLNKLDAGDC------------------------- 273
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC-NCITDSDMKP 175
I +G +A A L +LDL GG L +L SLN+ C N + +
Sbjct: 274 -GIGPEGARALAASQTLTRLDLRYNEIGVGGAEALAANPRLTSLNV--CGNALGSAGAAL 330
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L+ L L I + + ++G L L L++ + A +L+A +L L++
Sbjct: 331 LAASAALTELDIGNNGIGNAGARALGANATLVKLSVANNGIEEAGARALAASTTLTALDI 390
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
++ D G + + +L L+ N I D + L T L +LN+ + IG+ G+
Sbjct: 391 GSNRIGDAGAQALAANDTLVTLDASANWIGDPGALALADNTRLATLNVGANRIGEAGMRA 450
Query: 296 LTGLCNLKCLE 306
L L L+
Sbjct: 451 LEASTTLAVLK 461
>gi|330806226|ref|XP_003291073.1| hypothetical protein DICPUDRAFT_98891 [Dictyostelium purpureum]
gi|325078753|gb|EGC32387.1| hypothetical protein DICPUDRAFT_98891 [Dictyostelium purpureum]
Length = 793
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 151/343 (44%), Gaps = 69/343 (20%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQ--DLCLGQYPGVNDKWMDVIAS-QGSS 58
LP ++ Q+I + L+ +L FR+C L +LC + P ++D W+++ S+
Sbjct: 294 LPDELCQKIIPLFQRRKILSSRTLSLFRNCKLTRLELCGKEVP-ISDDWLNITKGLMAST 352
Query: 59 LLSVDLS-GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
+ V++S S +TD G+ L NLQSLD ++ +I GL L
Sbjct: 353 ITYVNISKNSLLTDQGIASLSHLRNLQSLDISYVDKIDGSGLAAL--------------- 397
Query: 118 AITAQGMKAFAGLINLVKLDLERC--TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
AG + L KL +E C ++ L L L SL CN +TD D +
Sbjct: 398 --------VDAG-VPLQKLQMEGCLSLKLPQLFTTLSKLKTLSSLYAGACN-MTDDDCQQ 447
Query: 176 LSGLTNLKSLQISCSKV-TDSGIAYLKGLQKLTLLNLEGCPVTAA----CLDSLSALGSL 230
LS L L L + + V T+ G+ ++ L +LT L++ G A CL L L SL
Sbjct: 448 LSQLQTLTHLDVCRNAVITNRGLQFICNLSRLTELDIGGINQLDAQGIKCLLQLPHLESL 507
Query: 231 FYLNLNRCQLSDDGC-----------------EKFSKIGSLKVLNLGF---------NEI 264
N C + DD C FS +G+ + NL + I
Sbjct: 508 AAEN---CGI-DDKCMNYIGSLKSLKSLSLINNPFSDVGAKHIGNLIYLTTLDLSMCANI 563
Query: 265 TDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLT-GLCNLKCL 305
TD LVH + L+ + LNL+ CG + D G+ +LT GL LK L
Sbjct: 564 TDATLVHFRNLSQISKLNLNFCGNLTDSGVTSLTGGLSQLKTL 606
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 127/270 (47%), Gaps = 48/270 (17%)
Query: 152 KGLMK--LESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLK----GLQ 204
KGLM + +NI + +TD + LS L NL+SL IS K+ SG+A L LQ
Sbjct: 346 KGLMASTITYVNISKNSLLTDQGIASLSHLRNLQSLDISYVDKIDGSGLAALVDAGVPLQ 405
Query: 205 KLTLLNLEGC-----PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
KL +EGC P L L L SL+ C ++DD C++ S++ +L L++
Sbjct: 406 KL---QMEGCLSLKLPQLFTTLSKLKTLSSLYA---GACNMTDDDCQQLSQLQTLTHLDV 459
Query: 260 --------------------------GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
G N++ + + L L +LESL ++CGI D+ +
Sbjct: 460 CRNAVITNRGLQFICNLSRLTELDIGGINQLDAQGIKCLLQLPHLESLAAENCGIDDKCM 519
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKS 352
+ L +LK L L + G +H+ L L +++LS I+D +L LS +
Sbjct: 520 NYIGSLKSLKSLSLINNPFSDVGAKHIGNLIYLTTLDLSMCANITDATLVHFRNLSQISK 579
Query: 353 LNLD-ARQITDTGLAALTSLTGLTHLDLFG 381
LNL+ +TD+G+ +LT GL+ L G
Sbjct: 580 LNLNFCGNLTDSGVTSLTG--GLSQLKTLG 607
>gi|441432501|ref|YP_007354543.1| hypothetical protein Moumou_00581 [Acanthamoeba polyphaga
moumouvirus]
gi|440383581|gb|AGC02107.1| hypothetical protein Moumou_00581 [Acanthamoeba polyphaga
moumouvirus]
Length = 488
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 194/456 (42%), Gaps = 108/456 (23%)
Query: 94 ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTR-IHGGLVNLK 152
ISD HL+ LS++ L+ ++ N IT G F L N+ K+++ C + I+ L L
Sbjct: 53 ISDN---HLQLLSDIYELNLKKCNNITGTG---FKYLKNIKKINISWCRKLINSELQYLN 106
Query: 153 GLMKLESLNIKWCNCITDSDMKPL----------SGLTNLKSLQISCSKVTDSGIAYLKG 202
++K+ N+ N I D MK L N+K + +S + +T+S + K
Sbjct: 107 NVIKI---NLSRSN-INDEGMKYLLFGKNEIDNLIPRNNIKQINLSNTNITNSSV---KL 159
Query: 203 LQKLTLLNLEGCP-VTAACLDSLSALGSLFY----------------------LNLNRCQ 239
L + ++ + CP + A+CL+ LS + SL L LN Q
Sbjct: 160 LSNIPVIKINYCPHIDASCLEYLSTVNSLSIRTTIDRDPNLCQNLKYLKNIEILKLNTGQ 219
Query: 240 L------------------SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
L S + F + L+ L+L FN+ D + TNL L
Sbjct: 220 LIGQHLNYLNNLKVLDAQNSQIELKDFDFLKKLEYLSLRFNDYID--YFDIINFTNLRVL 277
Query: 282 NLDSC-GIGDEGLVNLTGL--CNLK-CLELSDTQVGSSGLRHLSGLTNL----------- 326
L C GI D L NL L NLK CLE+++ SGL HL+ + N+
Sbjct: 278 KLPHCPGINDNCLKNLGRLEKINLKRCLEITN-----SGLEHLNNIKNVNISGCLNITDE 332
Query: 327 --------ESINLSF-TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
+ IN+ + GI+D L+ L + +K D IT TS + +
Sbjct: 333 GLKHLRKAKKINIRYCYGITDNGLKYLKNVEKIKIGYHDMFDITLIEFDHCTS-HEINYC 391
Query: 378 DLF---GARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHL 434
++ IT+ G AYL N +L+ L+ C +TD GL L N+ + + L
Sbjct: 392 EIVRNSSQNITNLGLAYLHNVSSLK-LKKCNN-ITDEGLIHLSIYNLELKYCNNIKGKFL 449
Query: 435 KPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFR 470
+ LKN + K+ N+IKR S+++PN+ R
Sbjct: 450 EHLKN------ANIKIFGNNIKREYSKNIPNIKFVR 479
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 42/230 (18%)
Query: 76 HLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
HL +NL+ LD Q S L+ L L LS R N+ I + F NL
Sbjct: 224 HLNYLNNLKVLD----AQNSQIELKDFDFLKKLEYLSLRFNDYIDYFDIINFT---NLRV 276
Query: 136 LDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNL------------- 182
L L C I+ LK L +LE +N+K C IT+S ++ L+ + N+
Sbjct: 277 LKLPHCPGINDNC--LKNLGRLEKINLKRCLEITNSGLEHLNNIKNVNISGCLNITDEGL 334
Query: 183 ------KSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
K + I C +TD+G+ YLK ++K+ + + +T D ++ +
Sbjct: 335 KHLRKAKKINIRYCYGITDNGLKYLKNVEKIKIGYHDMFDITLIEFDHCTSHE------I 388
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGF------NEITDECLVHLKGLTNLE 279
N C++ + + + +G + N+ N ITDE L+HL + NLE
Sbjct: 389 NYCEIVRNSSQNITNLGLAYLHNVSSLKLKKCNNITDEGLIHL-SIYNLE 437
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 33/240 (13%)
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
+LS +GS+ YLNL+ +SD+ + S I L + N IT +LK N++ +N
Sbjct: 36 NLSLIGSIKYLNLSHTNISDNHLQLLSDIYELNL--KKCNNITGTGFKYLK---NIKKIN 90
Query: 283 LDSCGIGDEGLVN--LTGLCNLKCLELSDTQVGSSGLRH----------LSGLTNLESIN 330
+ C L+N L L N+ + LS + + G+++ L N++ IN
Sbjct: 91 ISWC----RKLINSELQYLNNVIKINLSRSNINDEGMKYLLFGKNEIDNLIPRNNIKQIN 146
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT-DSGA 389
LS T I++ S++ L+ + +K +N I + L L+++ L+ R T D
Sbjct: 147 LSNTNITNSSVKLLSNIPVIK-INY-CPHIDASCLEYLSTVNSLS------IRTTIDRDP 198
Query: 390 AYLRNFKNLRSLEICG---GGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
+N K L+++EI G L L L +L V +++ + L+ LK L L+L
Sbjct: 199 NLCQNLKYLKNIEILKLNTGQLIGQHLNYLNNLKVLDAQNSQIELKDFDFLKKLEYLSLR 258
>gi|302754944|ref|XP_002960896.1| hypothetical protein SELMODRAFT_75506 [Selaginella moellendorffii]
gi|300171835|gb|EFJ38435.1| hypothetical protein SELMODRAFT_75506 [Selaginella moellendorffii]
Length = 637
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 200/436 (45%), Gaps = 50/436 (11%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI 92
LQ + L G++D + +AS L ++D+S +++TD G+ L + +L+ L+ C
Sbjct: 171 LQVVVLKGCVGISDAGLCFLASNCKELTTIDVSYTEITDDGVRCLSNLPSLRVLNLAACS 230
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT------RIHG 146
+ D GL R ++L L ++T G+ +F +L L L C+ +I G
Sbjct: 231 NVGDAGLT--RTSTSLLELDLSCCRSVTNVGI-SFLSKRSLQFLKLGFCSPVKKRSQITG 287
Query: 147 GLVNLKG-LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIA-YLKGL 203
L+ G L ++++L + C D S L L +S C VTDSG+A G
Sbjct: 288 QLLEAVGKLTQIQTLKLAGCEIAGDGLRFVGSCCLQLSDLSLSKCRGVTDSGMASIFHGC 347
Query: 204 QKLTLLNLEGC---PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG 260
+ L L+L C AC + S+ G L L + C++ L
Sbjct: 348 KNLRKLDLTCCLDLTEITACNIARSSAG-LVSLKIEACRI------------------LT 388
Query: 261 FNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
N I + ++ + LE L++ C I D GL + LK L+L +V +G+ H+
Sbjct: 389 ENNIP----LLMERCSCLEELDVTDCNIDDAGLECIAKCKFLKTLKLGFCKVSDNGIEHV 444
Query: 321 -SGLTNLESINLSFTG-ISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALTSLTGLTH 376
++L ++L +G + D + +A G L+ LNL ITD + +++ L+ L
Sbjct: 445 GRNCSDLIELDLYRSGNVGDAGVASIAAGCRKLRILNLSYCPNITDASIVSISQLSHLQQ 504
Query: 377 LDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLV-------SLNVSNSRITSA 429
L++ G + L FKNL L++ G+ D G+T +V LN+S RI++A
Sbjct: 505 LEIRGCKGVGL-EKKLPEFKNLVELDLKHCGIGDRGMTSIVHCFPNLQQLNLSYCRISNA 563
Query: 430 GLRHLKPLKNLRSLTL 445
L L L+ L+++ L
Sbjct: 564 ALVMLGNLRCLQNVKL 579
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 191/430 (44%), Gaps = 81/430 (18%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLRGLS--NLTSLSFRRNNAITAQGMKAFA---------- 128
+ ++SLD + CI+I+D L + L+ L SL R T G+ A A
Sbjct: 65 TGIESLDLSSCIKITDEDLALVGELAGTRLRSLGLARMGGFTVAGIVALARDCSALVELD 124
Query: 129 ----------------GLINLVKLDLERCTRIH-GGLVNLK-GLMKLESLNIKWCNCITD 170
L NL KLDL C I GL L G KL+ + +K C I+D
Sbjct: 125 LRCCNSLGDLELAAVCQLGNLRKLDLTGCYMISDAGLGCLAAGCKKLQVVVLKGCVGISD 184
Query: 171 SDMKPL-SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALG 228
+ + L S L ++ +S +++TD G+ L L L +LNL C V A L S
Sbjct: 185 AGLCFLASNCKELTTIDVSYTEITDDGVRCLSNLPSLRVLNLAACSNVGDAGLTRTST-- 242
Query: 229 SLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGF-------NEITDECLVHLKGLTNLES 280
SL L+L+ C+ +++ G SK SL+ L LGF ++IT + L + LT +++
Sbjct: 243 SLLELDLSCCRSVTNVGISFLSK-RSLQFLKLGFCSPVKKRSQITGQLLEAVGKLTQIQT 301
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
L L C I +GL G C CL+LSD + SG+ ++ F G +
Sbjct: 302 LKLAGCEIAGDGL-RFVGSC---CLQLSDLSLSKCRGVTDSGMASI------FHGCKN-- 349
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI-TDSGAAYLRNFKNLR 399
LRKL + LD +IT +A S GL L + RI T++ L
Sbjct: 350 LRKLD-----LTCCLDLTEITACNIA--RSSAGLVSLKIEACRILTENNIPLL------- 395
Query: 400 SLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
+E C + L L+V++ I AGL + K L++L L CKV+ N I+ +
Sbjct: 396 -MERC---------SCLEELDVTDCNIDDAGLECIAKCKFLKTLKLGFCKVSDNGIEHV- 444
Query: 460 SRDLPNLVSF 469
R+ +L+
Sbjct: 445 GRNCSDLIEL 454
>gi|361069065|gb|AEW08844.1| Pinus taeda anonymous locus CL1917Contig1_03 genomic sequence
gi|383137600|gb|AFG49921.1| Pinus taeda anonymous locus CL1917Contig1_03 genomic sequence
gi|383137602|gb|AFG49922.1| Pinus taeda anonymous locus CL1917Contig1_03 genomic sequence
gi|383137604|gb|AFG49923.1| Pinus taeda anonymous locus CL1917Contig1_03 genomic sequence
gi|383137606|gb|AFG49924.1| Pinus taeda anonymous locus CL1917Contig1_03 genomic sequence
gi|383137608|gb|AFG49925.1| Pinus taeda anonymous locus CL1917Contig1_03 genomic sequence
gi|383137610|gb|AFG49926.1| Pinus taeda anonymous locus CL1917Contig1_03 genomic sequence
gi|383137612|gb|AFG49927.1| Pinus taeda anonymous locus CL1917Contig1_03 genomic sequence
gi|383137614|gb|AFG49928.1| Pinus taeda anonymous locus CL1917Contig1_03 genomic sequence
gi|383137616|gb|AFG49929.1| Pinus taeda anonymous locus CL1917Contig1_03 genomic sequence
gi|383137618|gb|AFG49930.1| Pinus taeda anonymous locus CL1917Contig1_03 genomic sequence
gi|383137620|gb|AFG49931.1| Pinus taeda anonymous locus CL1917Contig1_03 genomic sequence
gi|383137622|gb|AFG49932.1| Pinus taeda anonymous locus CL1917Contig1_03 genomic sequence
gi|383137624|gb|AFG49933.1| Pinus taeda anonymous locus CL1917Contig1_03 genomic sequence
gi|383137626|gb|AFG49934.1| Pinus taeda anonymous locus CL1917Contig1_03 genomic sequence
gi|383137628|gb|AFG49935.1| Pinus taeda anonymous locus CL1917Contig1_03 genomic sequence
gi|383137630|gb|AFG49936.1| Pinus taeda anonymous locus CL1917Contig1_03 genomic sequence
gi|383137632|gb|AFG49937.1| Pinus taeda anonymous locus CL1917Contig1_03 genomic sequence
gi|383137634|gb|AFG49938.1| Pinus taeda anonymous locus CL1917Contig1_03 genomic sequence
Length = 73
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Query: 411 AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFR 470
+G+T LVSLNVSN+R+T+ GL+HL+PLKNL SL+L++CKVT +IK+LQ+ LPNL R
Sbjct: 14 SGMTALVSLNVSNTRVTNTGLQHLRPLKNLTSLSLQACKVTWPEIKKLQA-TLPNLAGVR 72
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA 226
+TD ++ +SG+T L SL +S ++VT++G+ +L+ L+ LT L+L+ C VT + L A
Sbjct: 5 LTDGALEFVSGMTALVSLNVSNTRVTNTGLQHLRPLKNLTSLSLQACKVTWPEIKKLQA 63
>gi|443688071|gb|ELT90873.1| hypothetical protein CAPTEDRAFT_165456 [Capitella teleta]
Length = 642
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 215/484 (44%), Gaps = 73/484 (15%)
Query: 18 RC--LTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGL 74
RC +T ++ + R+C LQDL L + P ++D + ++ ++ +++S S +TD+ L
Sbjct: 171 RCERITSLTFYSIRECRNLQDLNLSECPALDDDSLKMVLEGCKIIIYLNISHSLITDASL 230
Query: 75 IHL-KDCSNLQSLDFNFCIQISDGGLEHL---RGLSNLTSLSFRRNNAITAQGMKAFAGL 130
+ K C NLQ L FC++ SD GL++L L L + +T G+ +
Sbjct: 231 RSISKYCLNLQYLSLAFCLRYSDKGLQYLANGESAKRLNHLDISGCSQVTPNGLAKLS-- 288
Query: 131 INLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCS 190
E C+ + L+N +ES + ITD + K L ++ L S +S
Sbjct: 289 --------EGCSDVQTLLLN-----DIESFDDACLEAITD-NCKNLRNISFLGSHNLS-- 332
Query: 191 KVTDSGIAYLKGLQKLTLLNLEG-CPVTAACL----DSLSALGSLFYLNLNRCQLSDDGC 245
D+ + + +KL +L ++ C +T S L L+ ++ +R ++D
Sbjct: 333 ---DNALKNVATSKKLQMLKIDSNCKITDITFKYIGKSCHELRHLYLVDCHR--ITDLTL 387
Query: 246 EKFSKIGSLKVLNLG-FNEITD---ECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLC 300
+ S+ +L V+NL ITD LV L+ LNL +C +GD LVN+ C
Sbjct: 388 KVLSQCRNLTVVNLADCVRITDTGVRYLVESSCGNKLQELNLTNCIRVGDIALVNIHKRC 447
Query: 301 -NLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL-DA 357
NL L L + + +G+ L +L ++++S D L L LK +NL +
Sbjct: 448 HNLTYLHLCFCEHISEAGIELLGQTHSLTALDISGCNCGDAGLSSLGNNIRLKDVNLSEC 507
Query: 358 RQITDTGLAALT-SLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG- 415
ITD GL T + LDL ++ GA +++L C LT L G
Sbjct: 508 SAITDLGLQKFAQQCTEIERLDLSHCQMITDGA--------IKNLAFCCRMLTHLSLAGC 559
Query: 416 -----------------LVSLNVSNS-RITSAGLRHLKP-LKNLRSLTLESC-KVTANDI 455
L+ L++S S IT +++LK K L++L + C ++ + +
Sbjct: 560 KLLTDLSVQYLSGVCHYLLYLDISGSLHITDKSMKYLKKGCKKLQTLIMLYCSHISKHAV 619
Query: 456 KRLQ 459
++Q
Sbjct: 620 HKMQ 623
>gi|242057027|ref|XP_002457659.1| hypothetical protein SORBIDRAFT_03g011312 [Sorghum bicolor]
gi|241929634|gb|EES02779.1| hypothetical protein SORBIDRAFT_03g011312 [Sorghum bicolor]
Length = 81
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 45/53 (84%)
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
L+K++GLSS+K LNLD RQIT+TGLA+L SLTGLTHLDLFGARI DSG R
Sbjct: 29 LKKISGLSSMKPLNLDNRQITNTGLASLASLTGLTHLDLFGARIIDSGMNCFR 81
>gi|17546075|ref|NP_519477.1| GALA protein 4 [Ralstonia solanacearum GMI1000]
gi|17428371|emb|CAD15058.1| type III effector protein gala6 [Ralstonia solanacearum GMI1000]
Length = 620
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 146/337 (43%), Gaps = 4/337 (1%)
Query: 56 GSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
G+ L+S++L +++ + G L L SLD + + + G E G + L LS
Sbjct: 259 GAPLVSLNLHNNEIGNEGARVLATSRTLTSLDVSNN-GVGNAGAEAFAGNTVLKQLSLA- 316
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
I+ G +A A +L LDL G L SL + N I +
Sbjct: 317 GGMISGDGAQALADNKSLTDLDLSNNRLGDAGAQALADSESFVSLKLG-GNEIGADGAEA 375
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L+ L+SL +S + + G+ L G KL L+L C + + +L+ SL L L
Sbjct: 376 LARNVVLQSLNLSYNPIGFWGVNAL-GRAKLRKLDLCACAIDSDGASALARNTSLASLYL 434
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
++ DDG +K +L +LNL N I L +L +L+L GIGD+G
Sbjct: 435 GSNRIGDDGARALAKNSTLTLLNLSGNNIHAVGAQALASNDSLITLDLSRNGIGDDGTAA 494
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L L L LS Q+GS+G + L+ L ++LS I LA + L +LN+
Sbjct: 495 LACHPRLTSLNLSRNQIGSTGAQQLAKSATLAELDLSENRIGPEGAEALARSTVLTTLNV 554
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
I + G AL LT LD I + GA L
Sbjct: 555 SYNAIGEAGARALAESVSLTSLDARRNGIGEDGAKVL 591
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 115/245 (46%), Gaps = 15/245 (6%)
Query: 220 CLDSLSALGS-LFYLNLNRCQLSDDGCEKFSKIGS--LKVLNLGFNEITDECLVHLKGLT 276
L++L AL L +L + RC S E + + S LK LNL EI E L
Sbjct: 154 TLEALKALPPELEHLEIGRCTGSAISAEGLAHLASMPLKSLNLNGIEIGVEGARTLAASK 213
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
+L SL+L CGIGD L +++CL+LS ++G G + L+G L S+NL I
Sbjct: 214 SLVSLSLIGCGIGDRAAQALVASRSIQCLDLSVNRIGRDGAQALAGAP-LVSLNLHNNEI 272
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
+ R LA +L SL++ + + G A T L L L G I+ GA L + K
Sbjct: 273 GNEGARVLATSRTLTSLDVSNNGVGNAGAEAFAGNTVLKQLSLAGGMISGDGAQALADNK 332
Query: 397 NLRSLEICGGGLTDAGLTGL------VSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
+L L++ L DAG L VSL + + I + G L R++ L+S +
Sbjct: 333 SLTDLDLSNNRLGDAGAQALADSESFVSLKLGGNEIGADGAEALA-----RNVVLQSLNL 387
Query: 451 TANDI 455
+ N I
Sbjct: 388 SYNPI 392
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 156/378 (41%), Gaps = 36/378 (9%)
Query: 92 IQISDGGLEHLRGLSNLTSL-SFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN 150
+ ISD + R LS +L S R +T + +KA L L++ RCT G ++
Sbjct: 127 LTISDPAM--FRQLSLYPALKSVRFKGELTLEALKALP--PELEHLEIGRCT---GSAIS 179
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
+GL L S+ LKSL ++ ++ G L + L L+
Sbjct: 180 AEGLAHLASMP--------------------LKSLNLNGIEIGVEGARTLAASKSLVSLS 219
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
L GC + +L A S+ L+L+ ++ DG + + L LNL NEI +E
Sbjct: 220 LIGCGIGDRAAQALVASRSIQCLDLSVNRIGRDGAQALAG-APLVSLNLHNNEIGNEGAR 278
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
L L SL++ + G+G+ G G LK L L+ + G + L+ +L ++
Sbjct: 279 VLATSRTLTSLDVSNNGVGNAGAEAFAGNTVLKQLSLAGGMISGDGAQALADNKSLTDLD 338
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
LS + D + LA S SL L +I G AL L L+L I G
Sbjct: 339 LSNNRLGDAGAQALADSESFVSLKLGGNEIGADGAEALARNVVLQSLNLSYNPIGFWGVN 398
Query: 391 YLRNFKNLRSLEICGGGLTDAGL------TGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
L K LR L++C + G T L SL + ++RI G R L L L
Sbjct: 399 ALGRAK-LRKLDLCACAIDSDGASALARNTSLASLYLGSNRIGDDGARALAKNSTLTLLN 457
Query: 445 LESCKVTANDIKRLQSRD 462
L + A + L S D
Sbjct: 458 LSGNNIHAVGAQALASND 475
>gi|413916550|gb|AFW56482.1| hypothetical protein ZEAMMB73_356315 [Zea mays]
Length = 660
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 216/490 (44%), Gaps = 89/490 (18%)
Query: 34 QDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVT-DSGLIHLKDCSNLQSLDFNFCI 92
+ +CL + GV + ++ + + L +VDLS D L S L+ L + C+
Sbjct: 108 RSVCLARANGVGWRGLEALVAACPKLAAVDLSHCVTAGDREAAALAAASELRDLRLDKCL 167
Query: 93 QISDGGLEHLR-GLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRIHGGLVN 150
++D GL + G L LS + I+ G+ A L L++ +G L +
Sbjct: 168 AVTDMGLAKVAVGCPKLEKLSLKWCREISDIGIDLLAKKCPELRSLNISYLKVGNGSLGS 227
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYL----KGLQ 204
+ L +LE L + C+ I D ++ LS G +L+S+ +S C VT G+A L LQ
Sbjct: 228 ISSLERLEELAMVCCSGIDDEGLELLSKGSDSLQSVDVSRCDHVTSEGLASLIDGRNFLQ 287
Query: 205 KLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC------------QLSD-------DGC 245
KL AA D L +G F L R ++SD + C
Sbjct: 288 KL----------YAA--DCLHEIGQRFLSKLARLKETLTLLKLDGLEVSDSLLQAIGESC 335
Query: 246 EKFSKIGSLK---VLNLGFNEITDEC-------LVHLKGLTN------------LESLNL 283
K +IG K V + G + + C L +TN LE L L
Sbjct: 336 NKLVEIGLSKCSGVTDGGISSLVARCSDLRTIDLTCCNLITNNALDSIADNCKMLECLRL 395
Query: 284 DSCG-IGDEGLVNLTGLC-NLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGS 340
+SC I ++GL +T C NLK ++L+D V + L+HL+ + L + L + ISD
Sbjct: 396 ESCSLINEKGLERITTCCPNLKEIDLTDCGVDDAALQHLAKCSELRILKLGLCSSISD-- 453
Query: 341 LRKLAGLSS----LKSLNL-DARQITDTGLAALTSLTGLTHLDL----FGARITDSGAAY 391
R +A +SS L L+L ITD GLAAL + G + L + +ITD+G +
Sbjct: 454 -RGIAFISSNCGKLVELDLYRCNSITDDGLAALAN--GCKRIKLLNLCYCNKITDTGLGH 510
Query: 392 LRNFKNLRSLE------ICGGGLTDA--GLTGLVSLNVSNSR-ITSAGLRHLKPLK-NLR 441
L + + L +LE + G G++ G L+ L++ + AGL L NLR
Sbjct: 511 LGSLEELTNLELRCLVRVTGIGISSVAIGCKNLIELDLKRCYSVDDAGLWALARYALNLR 570
Query: 442 SLTLESCKVT 451
LT+ C+VT
Sbjct: 571 QLTISYCQVT 580
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 32/230 (13%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
+N+K ++ I + +L +DL+ V D+ L HL CS L+ L C ISD G+ +
Sbjct: 401 INEKGLERITTCCPNLKEIDLTDCGVDDAALQHLAKCSELRILKLGLCSSISDRGIAFIS 460
Query: 104 G-LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
L L R N+IT G+ A A G +++ LN+
Sbjct: 461 SNCGKLVELDLYRCNSITDDGLAALA-----------------------NGCKRIKLLNL 497
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISC-SKVTDSGIAYLK-GLQKLTLLNLEGC-PVTAA 219
+CN ITD+ + L L L +L++ C +VT GI+ + G + L L+L+ C V A
Sbjct: 498 CYCNKITDTGLGHLGSLEELTNLELRCLVRVTGIGISSVAIGCKNLIELDLKRCYSVDDA 557
Query: 220 CLDSLSALG-SLFYLNLNRCQLSDDG-CEKFSKIGSL---KVLNLGFNEI 264
L +L+ +L L ++ CQ++ G C S + L K+++L + I
Sbjct: 558 GLWALARYALNLRQLTISYCQVTGLGLCHLLSSLRCLQDIKMVHLSWVSI 607
>gi|157866007|ref|XP_001681710.1| putative surface antigen protein [Leishmania major strain Friedlin]
gi|68125008|emb|CAJ02922.1| putative surface antigen protein [Leishmania major strain Friedlin]
Length = 760
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 138/302 (45%), Gaps = 7/302 (2%)
Query: 176 LSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
S +T+L L+I + +T + A ++ L LNLEG V+ S + SL L
Sbjct: 201 WSRVTSLLELEIVAAGDITGTLPAKWSSIKSLRTLNLEGTQVSGTLPSGWSEMKSLTSLE 260
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
L Q+S +S I SL+ LNL +++ + +L +LNL+ +
Sbjct: 261 LEGTQVSGTLPPGWSSIKSLRTLNLEGTQVSGSLPPQWVSMASLRTLNLEGTQVSGTLPP 320
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
+ + +L LEL TQV + S + +L ++NL T +S + ++SL++LN
Sbjct: 321 GWSEMKSLTSLELEGTQVSGTLPLGWSEMKSLRTLNLEGTQVSGSLPPQWVSMASLRTLN 380
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG----GGLTD 410
L+ Q++ T + + LT+L L G +++ S R K+L +L + G G L
Sbjct: 381 LEGTQVSGTLPPGWSEMKSLTNLYLEGTQLSGSLPTEWRGIKSLTNLYLKGTQVSGSLPP 440
Query: 411 --AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVS 468
+ LT L +L++ ++++ + + +L LE C ++ + + LV
Sbjct: 441 QWSSLTSLRTLDLEGTQVSGRLPPEWSRMLSAENLQLEHCDLSGSLPPEWSAMPRLRLVG 500
Query: 469 FR 470
R
Sbjct: 501 LR 502
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 135/305 (44%), Gaps = 8/305 (2%)
Query: 54 SQGSSLLSVDL-SGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLS 112
S+ +SLL +++ + D+T + +L++L+ Q+S + +LTSL
Sbjct: 202 SRVTSLLELEIVAAGDITGTLPAKWSSIKSLRTLNLEG-TQVSGTLPSGWSEMKSLTSLE 260
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLV-NLKGLMKLESLNIKWCNCITDS 171
++ ++ + +L L+LE T++ G L + L +LN++
Sbjct: 261 LE-GTQVSGTLPPGWSSIKSLRTLNLEG-TQVSGSLPPQWVSMASLRTLNLE--GTQVSG 316
Query: 172 DMKP-LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
+ P S + +L SL++ ++V+ + ++ L LNLEG V+ + ++ SL
Sbjct: 317 TLPPGWSEMKSLTSLELEGTQVSGTLPLGWSEMKSLRTLNLEGTQVSGSLPPQWVSMASL 376
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
LNL Q+S +S++ SL L L +++ +G+ +L +L L +
Sbjct: 377 RTLNLEGTQVSGTLPPGWSEMKSLTNLYLEGTQLSGSLPTEWRGIKSLTNLYLKGTQVSG 436
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
+ L +L+ L+L TQV S + + E++ L +S + + + L
Sbjct: 437 SLPPQWSSLTSLRTLDLEGTQVSGRLPPEWSRMLSAENLQLEHCDLSGSLPPEWSAMPRL 496
Query: 351 KSLNL 355
+ + L
Sbjct: 497 RLVGL 501
>gi|395539122|ref|XP_003771522.1| PREDICTED: F-box/LRR-repeat protein 13, partial [Sarcophilus
harrisii]
Length = 509
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 188/420 (44%), Gaps = 50/420 (11%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDC-SNLQSLDFNFC 91
LQ+L + Q G+ND M + SL+ ++++ +D+++ L L C NLQ L +C
Sbjct: 83 LQELNVSQCEGLNDDAMRYVLEGCPSLIHLNIAHTDISNGTLKLLSRCFPNLQKLSLAYC 142
Query: 92 IQISDGGLEHL---RGLSNLTSLSFRRNNAITAQGMKAFA----GLINLVKLDL------ 138
++ GL +L +G +T+L I+ QG K A G+ +LV D+
Sbjct: 143 RNFTEKGLLYLNLGKGCHKITNLDLSGCTQISVQGFKDIASSCTGIKHLVINDMPTLTDN 202
Query: 139 ------ERCTRI---------HGGLVNLKGLM--KLESLNIKWCNCITDSDMKPL-SGLT 180
ERC I H K L L + ++ N ITD K +
Sbjct: 203 CIKALVERCKSITSVIFIGSPHLSDTAFKYLTDCSLNKVRVEGNNRITDLTFKLMDKHYG 262
Query: 181 NLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG-----SLFYLN 234
+L + ++ C ++TD + + L+ L +LNL C + + S LG L LN
Sbjct: 263 DLSHIYMTDCERITDVSLKSIANLKNLVVLNLANC-IRIGDVGLRSFLGGPSSSKLRELN 321
Query: 235 LNRC-QLSD-DGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
L C Q+SD E + SL LNL ++TD + + L NL S++L I DE
Sbjct: 322 LTHCAQISDLSLAEMGERCRSLTYLNLRSCTQLTDCGIEFITKLPNLISIDLSVTAITDE 381
Query: 292 GLVNLTGLCNLKCLELSDTQ-VGSSGLRHLSGLTN-LESINLSFTGISDGSLRKLAGLSS 349
L +L+ LK L +S+ + + SG++H T LE +++SF G + K
Sbjct: 382 ALTSLSNHKKLKELSVSECEFITDSGVKHFCQSTPILEHLDVSFCLKLSGEILKALSTKC 441
Query: 350 LKSLNLD---ARQITDTGLAALTSLTGLTH-LDLFG-ARITDSGAAY-LRNFKNLRSLEI 403
L+ +L ++ D + L+ H LD+ G R+TD Y L+ K LR L++
Sbjct: 442 LRLTSLSIAGCPKMNDLAIRILSKKCHYLHILDVSGCVRLTDKAIEYLLQGCKQLRILKM 501
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 164/368 (44%), Gaps = 45/368 (12%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN--LKGLMKLESL 160
R N+ L+F +++ K NL +L++ +C ++ + L+G L L
Sbjct: 53 RWRPNVLRLNFHGCSSLQWPSFKLINQCKNLQELNVSQCEGLNDDAMRYVLEGCPSLIHL 112
Query: 161 NIKWCNCITDSDMKPLSG-LTNLKSLQIS-CSKVTDSGIAYL---KGLQKLTLLNLEGCP 215
NI + I++ +K LS NL+ L ++ C T+ G+ YL KG K+T L+L GC
Sbjct: 113 NIAHTD-ISNGTLKLLSRCFPNLQKLSLAYCRNFTEKGLLYLNLGKGCHKITNLDLSGCT 171
Query: 216 VTAA--CLDSLSALGSLFYLNLNRCQLSDDGCEK-----------FSKIGSLKVLNLGFN 262
+ D S+ + +L +N D C K IGS + + F
Sbjct: 172 QISVQGFKDIASSCTGIKHLVINDMPTLTDNCIKALVERCKSITSVIFIGSPHLSDTAFK 231
Query: 263 EITDECL--VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
+TD L V ++G + L + D+ +L+ + C ++D L+ +
Sbjct: 232 YLTDCSLNKVRVEGNNRITDLTFK---LMDKHYGDLSHIYMTDCERITDV-----SLKSI 283
Query: 321 SGLTNLESINLS-FTGISDGSLRKLAG---LSSLKSLNL-DARQITDTGLAAL-TSLTGL 374
+ L NL +NL+ I D LR G S L+ LNL QI+D LA + L
Sbjct: 284 ANLKNLVVLNLANCIRIGDVGLRSFLGGPSSSKLRELNLTHCAQISDLSLAEMGERCRSL 343
Query: 375 THLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS------LNVSNSR-I 426
T+L+L ++TD G ++ NL S+++ +TD LT L + L+VS I
Sbjct: 344 TYLNLRSCTQLTDCGIEFITKLPNLISIDLSVTAITDEALTSLSNHKKLKELSVSECEFI 403
Query: 427 TSAGLRHL 434
T +G++H
Sbjct: 404 TDSGVKHF 411
>gi|320163976|gb|EFW40875.1| tyrosine-protein kinase CSK [Capsaspora owczarzaki ATCC 30864]
Length = 1378
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 143/325 (44%), Gaps = 12/325 (3%)
Query: 113 FRRNNAITAQGMKAFAGL--INLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITD 170
+ ++N IT AF GL + ++ L + I G GL L +++ + N IT
Sbjct: 65 YLQSNLITNIPASAFTGLTALQVIYLTSNQIVSISSGA--FSGLSALTYVSL-FNNLITS 121
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
+ LT L L + + +T GL LT L+L G +T+ ++ S L +L
Sbjct: 122 IPDSLFADLTALTYLGLHGNLITSMAATAFTGLNVLTRLSLYGNQITSISANAFSNLPAL 181
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L L QL+ + F+ + +L L L NEIT L L L+LDS I D
Sbjct: 182 TTLALYDNQLTSIPADAFTGLSALTELTLYDNEITSISANSFTSLPALIILSLDSNRITD 241
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
TGL L L LS Q+ S +GL+ L+S+ L I+ + GL +L
Sbjct: 242 ISANAFTGLTALNILYLSHNQLSSISANAFTGLSGLDSLTLFNNEITSIHVDAFTGLPAL 301
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGA-AYLRNFKNLRSLEICGGGLT 409
SL L + IT T+LT L L L +IT A A+ + L L++ +T
Sbjct: 302 TSLYLQSNLITSIPPFVFTNLTALQILVLAYNQITGIPANAFTADLAALNYLDVSENQVT 361
Query: 410 D------AGLTGLVSLNVSNSRITS 428
AGL L SL + ++ITS
Sbjct: 362 SIPANAFAGLHSLSSLFLQGNQITS 386
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 131/321 (40%), Gaps = 40/321 (12%)
Query: 89 NFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGL 148
N + IS G GLS LT +S NN IT+ FA L L L L HG L
Sbjct: 93 NQIVSISSGAFS---GLSALTYVSLF-NNLITSIPDSLFADLTALTYLGL------HGNL 142
Query: 149 VNLKGLMKLESLNIK-----WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGL 203
+ LN+ + N IT S L L +L + +++T GL
Sbjct: 143 ITSMAATAFTGLNVLTRLSLYGNQITSISANAFSNLPALTTLALYDNQLTSIPADAFTGL 202
Query: 204 QKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNE 263
LT L L +T+ +S ++L +L L+L+ +++D F+ + +L +L L N+
Sbjct: 203 SALTELTLYDNEITSISANSFTSLPALIILSLDSNRITDISANAFTGLTALNILYLSHNQ 262
Query: 264 ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL 323
++ GL+ L+SL L + I + TGL L L L + S + L
Sbjct: 263 LSSISANAFTGLSGLDSLTLFNNEITSIHVDAFTGLPALTSLYLQSNLITSIPPFVFTNL 322
Query: 324 TNLESINLSF---TGISDGSL----------------------RKLAGLSSLKSLNLDAR 358
T L+ + L++ TGI + AGL SL SL L
Sbjct: 323 TALQILVLAYNQITGIPANAFTADLAALNYLDVSENQVTSIPANAFAGLHSLSSLFLQGN 382
Query: 359 QITDTGLAALTSLTGLTHLDL 379
QIT + LT LTHL L
Sbjct: 383 QITSILTSTFQGLTALTHLIL 403
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 111/272 (40%), Gaps = 18/272 (6%)
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
N L + + +T+ + GL L ++ L + + + S L +L Y++L +
Sbjct: 60 NTTQLYLQSNLITNIPASAFTGLTALQVIYLTSNQIVSISSGAFSGLSALTYVSLFNNLI 119
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
+ F+ + +L L L N IT GL L L+L I + L
Sbjct: 120 TSIPDSLFADLTALTYLGLHGNLITSMAATAFTGLNVLTRLSLYGNQITSISANAFSNLP 179
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
L L L D Q+ S +GL+ L + L I+ S L +L L+LD+ +I
Sbjct: 180 ALTTLALYDNQLTSIPADAFTGLSALTELTLYDNEITSISANSFTSLPALIILSLDSNRI 239
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLN 420
TD A T LT L L L +++ I T GL+GL SL
Sbjct: 240 TDISANAFTGLTALNILYLSHNQLS----------------SISANAFT--GLSGLDSLT 281
Query: 421 VSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
+ N+ ITS + L L SL L+S +T+
Sbjct: 282 LFNNEITSIHVDAFTGLPALTSLYLQSNLITS 313
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
GL L L + + ++ S +GLT + +NL ++ +AGL++LK L+L
Sbjct: 557 FAGLSALTILIMFNNKITSIDTDAFTGLTAMSQLNLQDNNLASIPASAIAGLTALKFLDL 616
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----- 410
+ITD + T LT L +L L RIT A + L + + +T
Sbjct: 617 SNNKITDISSSEFTGLTALNYLWLNSNRITSISANAFTSLPALAFVWLRANWITAISANA 676
Query: 411 -AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
AG+T L L++ N+RITS L L +LTL
Sbjct: 677 FAGVT-LTYLDLQNNRITSIPANAFTSLTALNTLTL 711
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 3/172 (1%)
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
YL N Q++ F+ + +L +L + N+IT GLT + LNL +
Sbjct: 543 YLQAN--QITSIPASAFAGLSALTILIMFNNKITSIDTDAFTGLTAMSQLNLQDNNLASI 600
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
+ GL LK L+LS+ ++ +GLT L + L+ I+ S L +L
Sbjct: 601 PASAIAGLTALKFLDLSNNKITDISSSEFTGLTALNYLWLNSNRITSISANAFTSLPALA 660
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
+ L A IT A +T LT+LDL RIT A + L +L +
Sbjct: 661 FVWLRANWITAISANAFAGVT-LTYLDLQNNRITSIPANAFTSLTALNTLTL 711
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 3/185 (1%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
QI+ GLS LT L NN IT+ AF GL + +L+L+ +
Sbjct: 548 QITSIPASAFAGLSALTIL-IMFNNKITSIDTDAFTGLTAMSQLNLQDNNLASIPASAIA 606
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
GL L+ L++ N ITD +GLT L L ++ +++T L L + L
Sbjct: 607 GLTALKFLDLS-NNKITDISSSEFTGLTALNYLWLNSNRITSISANAFTSLPALAFVWLR 665
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
+TA ++ + + +L YL+L +++ F+ + +L L L N T
Sbjct: 666 ANWITAISANAFAGV-TLTYLDLQNNRITSIPANAFTSLTALNTLTLNDNPFTTLPPGLF 724
Query: 273 KGLTN 277
KGL N
Sbjct: 725 KGLPN 729
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 1/187 (0%)
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
P + +N ++ + +++T + GL LT+L + +T+ D+ + L ++ LN
Sbjct: 532 PSAMPSNTLTVYLQANQITSIPASAFAGLSALTILIMFNNKITSIDTDAFTGLTAMSQLN 591
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
L L+ + + +LK L+L N+ITD GLT L L L+S I
Sbjct: 592 LQDNNLASIPASAIAGLTALKFLDLSNNKITDISSSEFTGLTALNYLWLNSNRITSISAN 651
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
T L L + L + + +G+T L ++L I+ L++L +L
Sbjct: 652 AFTSLPALAFVWLRANWITAISANAFAGVT-LTYLDLQNNRITSIPANAFTSLTALNTLT 710
Query: 355 LDARQIT 361
L+ T
Sbjct: 711 LNDNPFT 717
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 149/384 (38%), Gaps = 46/384 (11%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL- 151
+I+ ++ GL LTSL + ++N IT+ F L L L L +I G N
Sbjct: 286 EITSIHVDAFTGLPALTSL-YLQSNLITSIPPFVFTNLTALQILVLAY-NQITGIPANAF 343
Query: 152 -KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
L L L++ N +T +GL +L SL + +++T + +GL LT L
Sbjct: 344 TADLAALNYLDVSE-NQVTSIPANAFAGLHSLSSLFLQGNQITSILTSTFQGLTALTHLI 402
Query: 211 LEGCPVTAACLDSLSALG--------SLFYLNLNRCQLSDDGCEKFSKIGSLK------- 255
L P T L +L Y++ N ++ S GS
Sbjct: 403 LSDNPFTTLPPGLFKGLPNGLILSPPTLLYMSPNNFTFGENTVAPPSTYGSASEPYQCDT 462
Query: 256 VLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC-NLKCLELSDTQVGS 314
V + +D C + S+ C EG + ++G C + C G+
Sbjct: 463 VCGTCYAAGSDACCPSNCLICTSSSV----CTQCSEGAMMVSGSCVSHAC--------GA 510
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 374
GL SG T ++ N S T I A S+ ++ L A QIT +A L+ L
Sbjct: 511 GGLCTCSG-TTVDCQNRSLTVIPS------AMPSNTLTVYLQANQITSIPASAFAGLSAL 563
Query: 375 THLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITS 428
T L +F +IT + L + L AGLT L L++SN++IT
Sbjct: 564 TILIMFNNKITSIDTDAFTGLTAMSQLNLQDNNLASIPASAIAGLTALKFLDLSNNKITD 623
Query: 429 AGLRHLKPLKNLRSLTLESCKVTA 452
L L L L S ++T+
Sbjct: 624 ISSSEFTGLTALNYLWLNSNRITS 647
>gi|298360724|gb|ADI77941.1| truncated internalin A [Listeria monocytogenes]
Length = 403
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 164/322 (50%), Gaps = 35/322 (10%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNT--ISDISALSGLTSLQQL--SFGNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
L GL L LEL++ Q+ + +S L NL + L F ISD + ++ L+ L+ L
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISD--ISPVSSLTKLQRL 366
Query: 354 NLDARQITD-TGLAALTSLTGL 374
+++D + LA LT++ L
Sbjct: 367 FFYNNKVSDVSSLANLTNINWL 388
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 157/340 (46%), Gaps = 67/340 (19%)
Query: 121 AQGMKAFAGLINLV----KLDLERCTRIHGGLVNLKGLMKLESLN----IKWCNCITDSD 172
A+ MK G N+ + DL++ T + + +K + LE LN I + N +D
Sbjct: 54 AEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQL-TD 112
Query: 173 MKPLSGLTNLKSLQISCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
+ PL LT L + ++ +++ D + +A L L LTL N + + D L L
Sbjct: 113 ITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDI-----DPLKNLT--- 164
Query: 232 YLNLNRCQLSDDGCEKFSKIG---SLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
NLNR +LS + S + SL+ L+ G N++TD L L LT LE L++ S +
Sbjct: 165 --NLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTD--LKPLANLTTLERLDISSNKV 219
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
D + L+ LTNLES+ + ISD + L L+
Sbjct: 220 SD--------------------------ISVLAKLTNLESLIATNNQISD--ITPLGILT 251
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL 408
+L L+L+ Q+ D G L SLT LT LDL +I S A L L L++ +
Sbjct: 252 NLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQI--SNLAPLSGLTKLTELKLGANQI 307
Query: 409 TD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
++ AGLT L +L ++ ++ L + P+ NL++LT
Sbjct: 308 SNISPLAGLTALTNLELNENQ-----LEDISPISNLKNLT 342
>gi|149178243|ref|ZP_01856836.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148842892|gb|EDL57262.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 254
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 80/153 (52%), Gaps = 13/153 (8%)
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDS 387
+ +LS I+D +L+ LAGLS + SLNL ++T GLA L L LTHL L ++ D+
Sbjct: 58 AFHLSDQKITDETLKTLAGLSKVDSLNLRGTEVTSAGLAQLQHLKALTHLHLEKTKVNDA 117
Query: 388 GAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLN------VSNSRIT-SAGLRHLKPLKNL 440
G +L+ NL L + G +TDAGL+ L SL V +++T AGL + + L
Sbjct: 118 GLKHLQQLPNLEYLNLYGTEITDAGLSQLSSLKKLKRLYVWQTKVTRPAGLALQEQITGL 177
Query: 441 RSLTL-ESCKVTANDIKRLQSRDLPNLVSFRPE 472
+ L E K A + +LP V +PE
Sbjct: 178 EVIGLPEEPKPVAAE-----KPELPKPVEKKPE 205
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Query: 256 VLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSS 315
+L +ITDE L L GL+ ++SLNL + GL L L L L L T+V +
Sbjct: 58 AFHLSDQKITDETLKTLAGLSKVDSLNLRGTEVTSAGLAQLQHLKALTHLHLEKTKVNDA 117
Query: 316 GLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT-DTGLAALTSLTGL 374
GL+HL L NLE +NL T I+D L +L+ L LK L + ++T GLA +TGL
Sbjct: 118 GLKHLQQLPNLEYLNLYGTEITDAGLSQLSSLKKLKRLYVWQTKVTRPAGLALQEQITGL 177
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
LSD ++ L+ L+GL+ ++S+NL T ++ L +L L +L L+L+ ++ D
Sbjct: 58 AFHLSDQKITDETLKTLAGLSKVDSLNLRGTEVTSAGLAQLQHLKALTHLHLEKTKVNDA 117
Query: 364 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLT-DAGL 413
GL L L L +L+L+G ITD+G + L + K L+ L + +T AGL
Sbjct: 118 GLKHLQQLPNLEYLNLYGTEITDAGLSQLSSLKKLKRLYVWQTKVTRPAGL 168
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
+ +L I DE L L GL + L L T+V S+GL L L L ++L T ++D
Sbjct: 58 AFHLSDQKITDETLKTLAGLSKVDSLNLRGTEVTSAGLAQLQHLKALTHLHLEKTKVNDA 117
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
L+ L L +L+ LNL +ITD GL+ L+SL L L ++ ++T L+ +
Sbjct: 118 GLKHLQQLPNLEYLNLYGTEITDAGLSQLSSLKKLKRLYVWQTKVTRPAGLALQE--QIT 175
Query: 400 SLEICG 405
LE+ G
Sbjct: 176 GLEVIG 181
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 70/150 (46%), Gaps = 25/150 (16%)
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
+ +S K+TD + L GL K+ LNL G VT+A L L L +L +L+L + +++D
Sbjct: 58 AFHLSDQKITDETLKTLAGLSKVDSLNLRGTEVTSAGLAQLQHLKALTHLHLEKTKVNDA 117
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
G L HL+ L NLE LNL I D GL L+ L LK
Sbjct: 118 G------------------------LKHLQQLPNLEYLNLYGTEITDAGLSQLSSLKKLK 153
Query: 304 CLELSDTQVG-SSGLRHLSGLTNLESINLS 332
L + T+V +GL +T LE I L
Sbjct: 154 RLYVWQTKVTRPAGLALQEQITGLEVIGLP 183
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 58/98 (59%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
ITD +K L+GL+ + SL + ++VT +G+A L+ L+ LT L+LE V A L L L
Sbjct: 66 ITDETLKTLAGLSKVDSLNLRGTEVTSAGLAQLQHLKALTHLHLEKTKVNDAGLKHLQQL 125
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
+L YLNL +++D G + S + LK L + ++T
Sbjct: 126 PNLEYLNLYGTEITDAGLSQLSSLKKLKRLYVWQTKVT 163
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 20/180 (11%)
Query: 42 PGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEH 101
P +IA+ GS L +L+ +D HL D +I+D L+
Sbjct: 29 PATEQAKAKIIAAGGSVL---ELAQNDDRLEIAFHLSDQ------------KITDETLKT 73
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLN 161
L GLS + SL+ R +T+ G+ L L L LE+ GL +L+ L LE LN
Sbjct: 74 LAGLSKVDSLNLR-GTEVTSAGLAQLQHLKALTHLHLEKTKVNDAGLKHLQQLPNLEYLN 132
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVT-DSGIAYLKGLQKLTLLNL--EGCPVTA 218
+ + ITD+ + LS L LK L + +KVT +G+A + + L ++ L E PV A
Sbjct: 133 L-YGTEITDAGLSQLSSLKKLKRLYVWQTKVTRPAGLALQEQITGLEVIGLPEEPKPVAA 191
>gi|343414369|emb|CCD21014.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 469
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 190/372 (51%), Gaps = 41/372 (11%)
Query: 83 LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT 142
L+ L + C I+D + L LS+L +L IT + + L N V+LDL CT
Sbjct: 45 LEKLYLSHCTGITD--VPPLSKLSSLRTLDISHCTGIT--DVSPLSKLNNFVQLDLSHCT 100
Query: 143 RIHGGLVNLKGLMKLESLNIK-WCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYL 200
G+ ++ L L SL + + +C +D+ PLS L++L++L +S C+ + ++ L
Sbjct: 101 ----GITDVSPLSVLSSLRMLFFSHCTGITDVSPLSVLSSLRTLDLSYCTGI--KHVSPL 154
Query: 201 KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNL 259
L L L+L C + LS L SL L+L+ C + + SK+ SL+ L+L
Sbjct: 155 SKLSSLEKLDLSHCTAIKH-VSPLSKLSSLCTLDLSYCTGIKHES--PLSKLSSLRTLDL 211
Query: 260 GF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSSGL 317
ITD + L L++L +L+L C GI D + L+ L +L+ L+LS G + +
Sbjct: 212 SHCTGITD--VSPLSELSSLRTLDLSHCTGITD--VSPLSELSSLRTLDLSHCT-GITDV 266
Query: 318 RHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLT 375
LS L++L +++LS TGI+D S L+ LSSL++L+L ITD ++ L+ L+ L
Sbjct: 267 SPLSKLSSLRTLDLSHCTGITDVS--PLSELSSLRTLDLSHCTGITD--VSPLSELSSLR 322
Query: 376 HLDLFGAR-ITDSGAAYLRNFKNLRSLEI--CGGGLTDAGLTGLVSLNVSNSRITSAGLR 432
L L ITD + L +LR L++ C G + L+ L SL++ GL
Sbjct: 323 MLYLSHCTGITD--VSPLSELSSLRMLDLSHCTGITDVSPLSELSSLHI-------LGLS 373
Query: 433 HLKPLKNLRSLT 444
H + ++ LT
Sbjct: 374 HCTGITDVSPLT 385
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 98/187 (52%), Gaps = 14/187 (7%)
Query: 54 SQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLS 112
S+ SSL ++DLS + +TD L + S+L++LD + C I+D + L LS+L +L
Sbjct: 201 SKLSSLRTLDLSHCTGITDVS--PLSELSSLRTLDLSHCTGITD--VSPLSELSSLRTLD 256
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
IT + + L +L LDL CT I + L L L +L++ C IT D
Sbjct: 257 LSHCTGIT--DVSPLSKLSSLRTLDLSHCTGI-TDVSPLSELSSLRTLDLSHCTGIT--D 311
Query: 173 MKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
+ PLS L++L+ L +S C+ +TD ++ L L L +L+L C + LS L SL
Sbjct: 312 VSPLSELSSLRMLYLSHCTGITD--VSPLSELSSLRMLDLSHCTGITD-VSPLSELSSLH 368
Query: 232 YLNLNRC 238
L L+ C
Sbjct: 369 ILGLSHC 375
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 113/233 (48%), Gaps = 20/233 (8%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNF 90
+L+ L L G+ D S+ SSL ++DLS + +TD L + S+L++LD +
Sbjct: 251 SLRTLDLSHCTGITDVSP---LSKLSSLRTLDLSHCTGITDVS--PLSELSSLRTLDLSH 305
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN 150
C I+D + L LS+L L IT + + L +L LDL CT G+ +
Sbjct: 306 CTGITD--VSPLSELSSLRMLYLSHCTGIT--DVSPLSELSSLRMLDLSHCT----GITD 357
Query: 151 LKGLMKLESLNI-KWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTL 208
+ L +L SL+I +C +D+ PL+ + + L +S C+ +TD ++ L L L
Sbjct: 358 VSPLSELSSLHILGLSHCTGITDVSPLTTIIGFEKLYLSNCTGITD--VSPLSKLSSLRS 415
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF 261
L+L C + LS L SL L+++ C D SK+ SL +L L
Sbjct: 416 LDLSHCTGITD-VSPLSELSSLRTLDISHCTGITD-VSPLSKLSSLHILGLSH 466
>gi|374293090|ref|YP_005040125.1| hypothetical protein AZOLI_2723 [Azospirillum lipoferum 4B]
gi|357425029|emb|CBS87910.1| Conserved protein of unknown function; Leucine-rich repeat domain
[Azospirillum lipoferum 4B]
Length = 1026
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 159/331 (48%), Gaps = 35/331 (10%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
SL ++ SG+ V+D L L LQ LD C S L L GLS+L LS +
Sbjct: 19 SLQQLNCSGTSVSD--LSPLNGLRGLQQLD---CSLTSVSDLSPLSGLSDLQQLSC---S 70
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIH-GGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+ + + +GL L +LD C+ L L GL L+ L+ C+ + SD+ PL
Sbjct: 71 STSVSDLSPLSGLSGLQQLD---CSSTSVSDLFPLSGLSGLQQLS---CSSTSVSDLFPL 124
Query: 177 SGLTNLKSLQISCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAAC-LDSLSALGSLFYLN 234
SGL+ L+ L S + V+D S ++ L GLQ+L C +T+ L LS L L L+
Sbjct: 125 SGLSGLQELSCSGTSVSDLSPLSGLNGLQQLD------CSLTSVSDLSPLSGLSGLQELS 178
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
+ +SD S + L+ L+ ++D L L GL+ L+ L + D L
Sbjct: 179 CSGTSVSD--LSPLSGLSGLQELSCSGTSVSD--LSPLSGLSGLQQLYCSGTSVSD--LS 232
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
L+GL L+ L S T V L LSGL+ L+ + S T +SD L L+GLS L+ L+
Sbjct: 233 PLSGLSGLQQLSCSGTSVND--LSPLSGLSGLQQLYCSVTSVSD--LSPLSGLSGLQELS 288
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARIT 385
++D L L+ L+ L L L+ I
Sbjct: 289 CSDTSVSD--LFPLSGLSSLQELYLYNVEIP 317
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 145/301 (48%), Gaps = 32/301 (10%)
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD-SGIAYLKGLQKL 206
L L GL L+ L+ C+ + SD+ PLSGL+ L+ L S + V+D ++ L GLQ+L
Sbjct: 55 LSPLSGLSDLQQLS---CSSTSVSDLSPLSGLSGLQQLDCSSTSVSDLFPLSGLSGLQQL 111
Query: 207 TLLNLEGCPVTAAC-LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
+ C T+ L LS L L L+ + +SD S + L+ L+ ++
Sbjct: 112 S------CSSTSVSDLFPLSGLSGLQELSCSGTSVSD--LSPLSGLNGLQQLDCSLTSVS 163
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
D L L GL+ L+ L+ + D L L+GL L+ L S T V S L LSGL+
Sbjct: 164 D--LSPLSGLSGLQELSCSGTSVSD--LSPLSGLSGLQELSCSGTSV--SDLSPLSGLSG 217
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L+ + S T +SD L L+GLS L+ L+ + D L+ L+ L+GL L ++
Sbjct: 218 LQQLYCSGTSVSD--LSPLSGLSGLQQLSCSGTSVND--LSPLSGLSGLQQLYCSVTSVS 273
Query: 386 DSGAAYLRNFKNLRSLEICGGGLTD-AGLTGLVSL------NVSNSRITSAGLRHLKPLK 438
D + L L+ L ++D L+GL SL NV I +AG+ +P
Sbjct: 274 D--LSPLSGLSGLQELSCSDTSVSDLFPLSGLSSLQELYLYNVEIPGIPTAGVLSQEPDD 331
Query: 439 N 439
N
Sbjct: 332 N 332
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 138/308 (44%), Gaps = 49/308 (15%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
LS S + S L L S LQ LD C S L L GLS L LS ++ +
Sbjct: 67 LSCSSTSVSDLSPLSGLSGLQQLD---CSSTSVSDLFPLSGLSGLQQLSC---SSTSVSD 120
Query: 124 MKAFAGLINLVKLDLERCTRIH-GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNL 182
+ +GL L +L C+ L L GL L+ L+ C+ + SD+ PLSGL+ L
Sbjct: 121 LFPLSGLSGLQELS---CSGTSVSDLSPLSGLNGLQQLD---CSLTSVSDLSPLSGLSGL 174
Query: 183 KSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
+ ++SCS + S ++ L GL L L+ G V+ L LS L L L + +SD
Sbjct: 175 Q--ELSCSGTSVSDLSPLSGLSGLQELSCSGTSVSD--LSPLSGLSGLQQLYCSGTSVSD 230
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNL 302
L L GL+ L+ L+ + D L L+GL L
Sbjct: 231 --------------------------LSPLSGLSGLQQLSCSGTSVND--LSPLSGLSGL 262
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
+ L S T V S L LSGL+ L+ ++ S T +SD L L+GLSSL+ L L +I
Sbjct: 263 QQLYCSVTSV--SDLSPLSGLSGLQELSCSDTSVSD--LFPLSGLSSLQELYLYNVEIPG 318
Query: 363 TGLAALTS 370
A + S
Sbjct: 319 IPTAGVLS 326
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 81/182 (44%), Gaps = 26/182 (14%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
S L + SG+ V+D L L S LQ L C S L L GLS L L
Sbjct: 172 SGLQELSCSGTSVSD--LSPLSGLSGLQELS---CSGTSVSDLSPLSGLSGLQQLYC--- 223
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN-LKGLMKLESLNIKWCNCITDSDMKP 175
+ + + +GL L +L C+ G VN L L L L +C+ + SD+ P
Sbjct: 224 SGTSVSDLSPLSGLSGLQQLS---CS---GTSVNDLSPLSGLSGLQQLYCSVTSVSDLSP 277
Query: 176 LSGLTNLKSLQISCSKVTD-SGIAYLKGLQKLTLLNLE--GCPVTAA--------CLDSL 224
LSGL+ L+ L S + V+D ++ L LQ+L L N+E G P CLD L
Sbjct: 278 LSGLSGLQELSCSDTSVSDLFPLSGLSSLQELYLYNVEIPGIPTAGVLSQEPDDNCLDRL 337
Query: 225 SA 226
A
Sbjct: 338 RA 339
>gi|17546519|ref|NP_519921.1| GALA protein [Ralstonia solanacearum GMI1000]
Length = 401
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 123/299 (41%), Gaps = 55/299 (18%)
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
+T +GIA L L L L++ GC + A L++ +L LN++R + DDG +
Sbjct: 94 PITSAGIARLLAL-PLERLDVSGCGLDAESARLLASHPTLTVLNISRNAIGDDGAAALAA 152
Query: 251 IGSLKVLNLGFNEITD---ECLVHLKGLTNLE---------------------SLNLDSC 286
L LN+G N I+D LV GLT L+ L+ C
Sbjct: 153 NPKLTSLNVGRNGISDAGARALVACAGLTKLDISDNRIGDAGARALAGSAKLNKLDAGDC 212
Query: 287 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN---------------- 330
GIG EG L L L+L ++G G L+ L S+N
Sbjct: 213 GIGPEGARALAASQTLTRLDLRYNEIGVGGAEALAANPRLTSLNVCGNALGSAGAALLAA 272
Query: 331 --------LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
+ GI + R L ++L L++ I + G AL + T LT LD+
Sbjct: 273 SAALTELDIGNNGIGNAGARALGANATLVKLSVANNGIEEAGARALAASTTLTALDIGSN 332
Query: 383 RITDSGAAYLRNFKNLRSLEICGGGLTDAGL------TGLVSLNVSNSRITSAGLRHLK 435
RI D+GA L L +L+ + D G T L +LNV +RI AG+R L+
Sbjct: 333 RIGDAGAQALAANDTLVTLDASANWIGDPGALALADNTRLATLNVGANRIGEAGMRALE 391
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 1/233 (0%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 215
KL SLN+ N I+D+ + L L L IS +++ D+G L G KL L+ C
Sbjct: 155 KLTSLNVGR-NGISDAGARALVACAGLTKLDISDNRIGDAGARALAGSAKLNKLDAGDCG 213
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
+ +L+A +L L+L ++ G E + L LN+ N + L
Sbjct: 214 IGPEGARALAASQTLTRLDLRYNEIGVGGAEALAANPRLTSLNVCGNALGSAGAALLAAS 273
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 335
L L++ + GIG+ G L L L +++ + +G R L+ T L ++++
Sbjct: 274 AALTELDIGNNGIGNAGARALGANATLVKLSVANNGIEEAGARALAASTTLTALDIGSNR 333
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG 388
I D + LA +L +L+ A I D G AL T L L++ RI ++G
Sbjct: 334 IGDAGAQALAANDTLVTLDASANWIGDPGALALADNTRLATLNVGANRIGEAG 386
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 98/251 (39%), Gaps = 29/251 (11%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+ L +D+S + + D+G L + L LD C
Sbjct: 178 AGLTKLDISDNRIGDAGARALAGSAKLNKLDAGDC------------------------- 212
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC-NCITDSDMKP 175
I +G +A A L +LDL GG L +L SLN+ C N + +
Sbjct: 213 -GIGPEGARALAASQTLTRLDLRYNEIGVGGAEALAANPRLTSLNV--CGNALGSAGAAL 269
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L+ L L I + + ++G L L L++ + A +L+A +L L++
Sbjct: 270 LAASAALTELDIGNNGIGNAGARALGANATLVKLSVANNGIEEAGARALAASTTLTALDI 329
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
++ D G + + +L L+ N I D + L T L +LN+ + IG+ G+
Sbjct: 330 GSNRIGDAGAQALAANDTLVTLDASANWIGDPGALALADNTRLATLNVGANRIGEAGMRA 389
Query: 296 LTGLCNLKCLE 306
L L L+
Sbjct: 390 LEASTTLAVLK 400
>gi|157865947|ref|XP_001681680.1| putative surface antigen protein [Leishmania major strain Friedlin]
gi|68124978|emb|CAJ02759.1| putative surface antigen protein [Leishmania major strain Friedlin]
Length = 610
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 127/264 (48%), Gaps = 1/264 (0%)
Query: 143 RIHGGL-VNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLK 201
++ G L + + LESL+I+ C I+ + S + +L L + +KV+ S
Sbjct: 143 KVSGTLPASWHSMTSLESLSIEKCESISGALPPQWSSMKSLSFLNLDGAKVSGSLPPQWS 202
Query: 202 GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF 261
++ L L+L V+ + S++ L +LNL+ ++S ++S + L VL++
Sbjct: 203 SMKSLRTLDLGDTQVSGSLPPQWSSMTLLSFLNLDGAKVSGALPPQWSSMTLLAVLDVQG 262
Query: 262 NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS 321
+++ + +L LNL I + + +L L++ TQV + S
Sbjct: 263 TQVSGTLPPQWSSMKSLSVLNLRGTSISGSVPPQWSSMTSLAVLDVQGTQVSGTLPPQWS 322
Query: 322 GLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG 381
+T+L S+++ T +S + + ++SL +LNL Q++ T +S+T LT LD+ G
Sbjct: 323 LMTSLTSLDVQGTQVSGSVPPQWSSMTSLTALNLRGTQVSGTLPPQWSSMTSLTSLDVQG 382
Query: 382 ARITDSGAAYLRNFKNLRSLEICG 405
+++ + + +L +L++ G
Sbjct: 383 TQVSGTLPPQWSSMTSLAALDVQG 406
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 124/280 (44%), Gaps = 31/280 (11%)
Query: 203 LQKLTLLNL------------------------EGCP-VTAACLDSLSALGSLFYLNLNR 237
L+KLT L L E C ++ A S++ SL +LNL+
Sbjct: 131 LEKLTFLTLLGNKVSGTLPASWHSMTSLESLSIEKCESISGALPPQWSSMKSLSFLNLDG 190
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
++S ++S + SL+ L+LG +++ +T L LNLD + +
Sbjct: 191 AKVSGSLPPQWSSMKSLRTLDLGDTQVSGSLPPQWSSMTLLSFLNLDGAKVSGALPPQWS 250
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA 357
+ L L++ TQV + S + +L +NL T IS + + ++SL L++
Sbjct: 251 SMTLLAVLDVQGTQVSGTLPPQWSSMKSLSVLNLRGTSISGSVPPQWSSMTSLAVLDVQG 310
Query: 358 RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------A 411
Q++ T + +T LT LD+ G +++ S + +L +L + G ++ +
Sbjct: 311 TQVSGTLPPQWSLMTSLTSLDVQGTQVSGSVPPQWSSMTSLTALNLRGTQVSGTLPPQWS 370
Query: 412 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
+T L SL+V ++++ + +L +L ++ +V+
Sbjct: 371 SMTSLTSLDVQGTQVSGTLPPQWSSMTSLAALDVQGTQVS 410
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 103/237 (43%), Gaps = 31/237 (13%)
Query: 246 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC------------GIGDEGL 293
+ +SK+ L L L N+++ +T+LESL+++ C +
Sbjct: 126 DSWSKLEKLTFLTLLGNKVSGTLPASWHSMTSLESLSIEKCESISGALPPQWSSMKSLSF 185
Query: 294 VNLTG-------------LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
+NL G + +L+ L+L DTQV S S +T L +NL +S
Sbjct: 186 LNLDGAKVSGSLPPQWSSMKSLRTLDLGDTQVSGSLPPQWSSMTLLSFLNLDGAKVSGAL 245
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRS 400
+ + ++ L L++ Q++ T +S+ L+ L+L G I+ S + +L
Sbjct: 246 PPQWSSMTLLAVLDVQGTQVSGTLPPQWSSMKSLSVLNLRGTSISGSVPPQWSSMTSLAV 305
Query: 401 LEICG----GGLTDAG--LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
L++ G G L +T L SL+V ++++ + + +L +L L +V+
Sbjct: 306 LDVQGTQVSGTLPPQWSLMTSLTSLDVQGTQVSGSVPPQWSSMTSLTALNLRGTQVS 362
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 142/311 (45%), Gaps = 12/311 (3%)
Query: 51 VIASQGSSLLSV---DLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSN 107
+ Q SS+ S+ +L G+ V+ S +L++LD Q+S G L S+
Sbjct: 172 ALPPQWSSMKSLSFLNLDGAKVSGSLPPQWSSMKSLRTLDLGD-TQVS-GSLPP--QWSS 227
Query: 108 LTSLSFRRNNAITAQGM--KAFAGLINLVKLDLERCTRIHGGLVNLKGLMK-LESLNIKW 164
+T LSF + G ++ + L LD++ T++ G L MK L LN++
Sbjct: 228 MTLLSFLNLDGAKVSGALPPQWSSMTLLAVLDVQG-TQVSGTLPPQWSSMKSLSVLNLR- 285
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
I+ S S +T+L L + ++V+ + + LT L+++G V+ +
Sbjct: 286 GTSISGSVPPQWSSMTSLAVLDVQGTQVSGTLPPQWSLMTSLTSLDVQGTQVSGSVPPQW 345
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
S++ SL LNL Q+S ++S + SL L++ +++ +T+L +L++
Sbjct: 346 SSMTSLTALNLRGTQVSGTLPPQWSSMTSLTSLDVQGTQVSGTLPPQWSSMTSLAALDVQ 405
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
+ + + L L L+DT + + S L +L ++ LS + +S +
Sbjct: 406 GTQVSGTLPPQWSSMRRLTHLLLTDTLLSGTLPAEWSALQSLVTLQLSSSKVSGTLPPQW 465
Query: 345 AGLSSLKSLNL 355
+G+S +SL L
Sbjct: 466 SGMSKAQSLQL 476
>gi|115504803|ref|XP_001219194.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|83642676|emb|CAJ16709.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 735
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 186/453 (41%), Gaps = 88/453 (19%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSL----- 111
S L +DL G +T + L C+ L L + C GL + LSNL SL
Sbjct: 253 SHLFRLDLRGVHLTYRVVYSLSKCTGLTELYVSSC-----EGLSGVAWLSNLESLGDLDV 307
Query: 112 SFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDS 171
+R+N T A L L LDL + + L N+ L L++ +C +
Sbjct: 308 QWRKNLKHTGD---VLACLPLLRVLDLSGTSISNESLWNISESKLLRRLDLSFCGGV--K 362
Query: 172 DMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
D+ P+S + L+ L + C+ +T+ G+ L L L +LN+ P+ + L ++S++ SL
Sbjct: 363 DISPISDIVTLEELNLKGCTSITE-GVDKLGNLVNLHILNMSNTPLQSGFLYNISSIESL 421
Query: 231 FYLNLNRCQ-----------------------LSDDGCEKFSKIGSLKVLNLGFNEITDE 267
L+L+ C +G ++ L++LN+ +TDE
Sbjct: 422 VELDLSSCWGVASLDSSVQTAVRMRKGSYPLARHIEGINALGRLPKLRLLNMSSTPVTDE 481
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT------QVGSSGLRHLS 321
CL L+ +L LNL C L +++ L ++K LE D + G+ LR L
Sbjct: 482 CLHGLQMCKSLVWLNLSLCA----NLTDVSPLSSVKTLEEVDLGCCGNLKWGAGSLRRLP 537
Query: 322 GLTNLESINLSFTGISD----------GSLRKLAGLSSLKSLNLDARQITDTG------- 364
L ++L T I+D G + ++ G + L+ I G
Sbjct: 538 ---QLRILDLKNTVITDHCLGDVTYGGGVVSRMLGRCGMADLSFSRWSIRRGGNLVRLDL 594
Query: 365 --------LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG- 415
+A LTS+T L L G R G L L L++ G +TD L G
Sbjct: 595 SSCWGLTDIAHLTSITTLEELRFTGCRNLKDGVDALGQLPVLHLLDLSGTSITDDSLQGL 654
Query: 416 -----LVSLNVSNSRITSAGLRHLKPLKNLRSL 443
LV+LN+S + A L + PL + SL
Sbjct: 655 STCRSLVTLNIS----SCANLTDVSPLSRISSL 683
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 160/387 (41%), Gaps = 82/387 (21%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISD----------------------GGL 99
+DLSG+ +++ L ++ + L+ LD +FC + D G+
Sbjct: 329 LDLSGTSISNESLWNISESKLLRRLDLSFCGGVKDISPISDIVTLEELNLKGCTSITEGV 388
Query: 100 EHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC------------------ 141
+ L L NL L+ N + + + + + +LV+LDL C
Sbjct: 389 DKLGNLVNLHILNMS-NTPLQSGFLYNISSIESLVELDLSSCWGVASLDSSVQTAVRMRK 447
Query: 142 -----TRIHGGLVNLKGLMKLESLNIK-------------------WCN---CITDSDMK 174
R G+ L L KL LN+ W N C +D+
Sbjct: 448 GSYPLARHIEGINALGRLPKLRLLNMSSTPVTDECLHGLQMCKSLVWLNLSLCANLTDVS 507
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
PLS + L+ + + C G L+ L +L +L+L+ +T CL ++ G +
Sbjct: 508 PLSSVKTLEEVDLGCCGNLKWGAGSLRRLPQLRILDLKNTVITDHCLGDVTYGGGVVSRM 567
Query: 235 LNRCQLSDDGCEKFS--KIGSLKVLNL----GFNEITDECLVHLKGLTNLESLNLDSCGI 288
L RC ++D ++S + G+L L+L G +I HL +T LE L C
Sbjct: 568 LGRCGMADLSFSRWSIRRGGNLVRLDLSSCWGLTDIA-----HLTSITTLEELRFTGCRN 622
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGL 347
+G+ L L L L+LS T + L+ LS +L ++N+S ++D S L+ +
Sbjct: 623 LKDGVDALGQLPVLHLLDLSGTSITDDSLQGLSTCRSLVTLNISSCANLTDVS--PLSRI 680
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGL 374
SSL+ LNL + G+ L SL L
Sbjct: 681 SSLEELNLQKSKHIRRGIDELVSLPRL 707
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 182/419 (43%), Gaps = 72/419 (17%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
+N K ++ +A + L ++DLS + V D L + C LQ L + C + L
Sbjct: 170 ALNFKCLEAVA-RLPRLRALDLSETLVNDKCLHAISACKTLQQLGLSSC--------KRL 220
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIH--GGLVNLKGLMKLESL 160
R +S LT ++ +L +L+L C + G L L L +L+
Sbjct: 221 RDVSPLTQIA-------------------SLEELNLSHCENLKEVGALYRLSHLFRLDLR 261
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
+ +T + LS T L L +S C + SG+A+L L+ L L+++
Sbjct: 262 GVH----LTYRVVYSLSKCTGLTELYVSSCEGL--SGVAWLSNLESLGDLDVQWRKNLKH 315
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNL 278
D L+ L L L+L+ +S++ S+ L+ L+L F + D + + + L
Sbjct: 316 TGDVLACLPLLRVLDLSGTSISNESLWNISESKLLRRLDLSFCGGVKD--ISPISDIVTL 373
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGIS 337
E LNL C EG+ L L NL L +S+T + S L ++S + +L ++LS G++
Sbjct: 374 EELNLKGCTSITEGVDKLGNLVNLHILNMSNTPLQSGFLYNISSIESLVELDLSSCWGVA 433
Query: 338 --DGS------LRK--------------LAGLSSLKSLNLDARQITDTGLAALTSLTGLT 375
D S +RK L L L+ LN+ + +TD L L L
Sbjct: 434 SLDSSVQTAVRMRKGSYPLARHIEGINALGRLPKLRLLNMSSTPVTDECLHGLQMCKSLV 493
Query: 376 HLDL-FGARITDSGAAYLRNFKNLRSLEI--CGGGLTDAG----LTGLVSLNVSNSRIT 427
L+L A +TD + L + K L +++ CG AG L L L++ N+ IT
Sbjct: 494 WLNLSLCANLTD--VSPLSSVKTLEEVDLGCCGNLKWGAGSLRRLPQLRILDLKNTVIT 550
>gi|242067197|ref|XP_002448875.1| hypothetical protein SORBIDRAFT_05g000740 [Sorghum bicolor]
gi|241934718|gb|EES07863.1| hypothetical protein SORBIDRAFT_05g000740 [Sorghum bicolor]
Length = 691
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 186/420 (44%), Gaps = 65/420 (15%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI 92
L++L L GV+D + ++A + L S+DLS + +T + NLQ L CI
Sbjct: 202 LRELSLKWCLGVSDLGIQLLALKCRKLTSLDLSYTMITKDSFPPIMKLPNLQELTLVGCI 261
Query: 93 QISDGGLEHLRGL--SNLTSLSFRRNNAITAQGMKAFAGLI-NLVKLDLERCTRIHGGLV 149
I D L L+ +L L IT G+ + L+ NL +LDL C + +V
Sbjct: 262 GIDDDALGSLQKECSKSLQVLDLSHCQNITDVGVSSILKLVPNLFELDLSYCCPVTPSMV 321
Query: 150 -NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAY-LKGLQKL 206
+ + + KL +L ++ C + D + +LK L +S CS +TD+ ++ + L+ L
Sbjct: 322 RSFQKIPKLRTLKLEGCKFMVDGLKAIGTSCVSLKELNLSKCSGMTDTEFSFAMSRLKNL 381
Query: 207 TLLNLEGCP-VTAACLDSL-SALGSLFYLNLNRCQ------------------------- 239
L++ C +T L ++ S+ SL L + C
Sbjct: 382 LKLDITCCRNITDVSLAAMTSSCTSLISLRMESCSRVSSGALQLIGKHCSHLEQLDLTDS 441
Query: 240 -LSDDGCEKFSKIGSLKVLNLGFN-EITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVN 295
L D+G + S+ G L L +G +I+DE L H+ + NL ++L C G+ D+G++
Sbjct: 442 DLDDEGLKALSRCGKLSSLKIGICLKISDEGLTHIGRSCPNLRDIDLYRCGGLSDDGIIP 501
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLN 354
+ C + LESINLS+ T I+D SL L+ + L +L
Sbjct: 502 IAQGCPM-----------------------LESINLSYCTEITDRSLISLSKCTKLNTLE 538
Query: 355 LDA-RQITDTGLAALT-SLTGLTHLDLFGA-RITDSGAAYLRNFKN-LRSLEICGGGLTD 410
+ IT TGL+ + L+ LD+ + D G YL F + LR + + +TD
Sbjct: 539 IRGCPMITSTGLSEIAMGCRLLSKLDIKKCFEVNDVGMLYLSQFSHSLREINLSYCSVTD 598
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 139/320 (43%), Gaps = 64/320 (20%)
Query: 201 KGLQKLTLLNLE-------GCPVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFS-KI 251
KGL++L+L + GC V C++ L L+L C +SD G + + K
Sbjct: 174 KGLRRLSLARWKPLTDMGLGC-VAVGCME-------LRELSLKWCLGVSDLGIQLLALKC 225
Query: 252 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCN--LKCLELS 308
L L+L + IT + + L NL+ L L C GI D+ L +L C+ L+ L+LS
Sbjct: 226 RKLTSLDLSYTMITKDSFPPIMKLPNLQELTLVGCIGIDDDALGSLQKECSKSLQVLDLS 285
Query: 309 DTQ----VGSSGLRHLSGLTNLESINLSFT-GISDGSLRKLAGLSSLKSLNLDARQITDT 363
Q VG S + L + NL ++LS+ ++ +R + L++L L+ +
Sbjct: 286 HCQNITDVGVSSILKL--VPNLFELDLSYCCPVTPSMVRSFQKIPKLRTLKLEGCKFMVD 343
Query: 364 GLAAL-TSLTGLTHLDLFGAR-ITDSGAAY-LRNFKNLRSLEI-CGGGLTDAGL------ 413
GL A+ TS L L+L +TD+ ++ + KNL L+I C +TD L
Sbjct: 344 GLKAIGTSCVSLKELNLSKCSGMTDTEFSFAMSRLKNLLKLDITCCRNITDVSLAAMTSS 403
Query: 414 -TGLVSLNV-SNSRIT-------------------------SAGLRHLKPLKNLRSLTLE 446
T L+SL + S SR++ GL+ L L SL +
Sbjct: 404 CTSLISLRMESCSRVSSGALQLIGKHCSHLEQLDLTDSDLDDEGLKALSRCGKLSSLKIG 463
Query: 447 SCKVTANDIKRLQSRDLPNL 466
C +++ R PNL
Sbjct: 464 ICLKISDEGLTHIGRSCPNL 483
>gi|125536975|gb|EAY83463.1| hypothetical protein OsI_38675 [Oryza sativa Indica Group]
Length = 702
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 136/520 (26%), Positives = 224/520 (43%), Gaps = 102/520 (19%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGS------------------------- 67
++ +CL + GV + +D + + L +VDLS
Sbjct: 104 VRRVCLARASGVGWRGLDALVAACPRLEAVDLSHCVGAGDREAAALAAATGLRELSLEKC 163
Query: 68 -DVTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLE-------HLRGLS----NLTSLSFR 114
VTD GL + C L+ L +C +ISD G++ LR L L L
Sbjct: 164 LGVTDMGLAKVVVGCPRLEKLSLKWCREISDIGIDLLSKKCHDLRSLDISYLKLLGLGMI 223
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLV------------NLKGLMKLESLNI 162
+ T + +K V D+E GL ++ L KLE L +
Sbjct: 224 CGSTATNKAVKCDFDSSLWVDFDMENVQSSELGLTGWLILVGNESLRSISSLEKLEELAM 283
Query: 163 KWCNCITDSDMKPL-SGLTNLKSLQIS-CSKVTDSGIA---------------------- 198
C+CI D ++ L G +L+S+ +S C VT G+A
Sbjct: 284 VCCSCIDDDGLELLGKGSNSLQSVDVSRCDHVTSQGLASLIDGHNFLQKLNAADSLHEMR 343
Query: 199 --YLKGLQKL----TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKF-SK 250
+L L KL T+L L+G V ++ L ++ +L + L++C ++D+G ++
Sbjct: 344 QSFLSNLAKLKDTLTVLRLDGLEVASSVLLAIGGCNNLVEIGLSKCNGVTDEGISSLVTQ 403
Query: 251 IGSLKVLNLGFNEITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLTGLC-NLKCLEL 307
L+V++L +C + + +E L L+SC I ++GL + C NLK ++L
Sbjct: 404 CSHLRVIDLTCCNSLQQCPDSIAENCKMVERLRLESCSSISEKGLEQIATSCPNLKEIDL 463
Query: 308 SDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDARQ---ITDT 363
+D V + LR L+ + L + L + ISD L ++ S K + LD + ITD
Sbjct: 464 TDCGVNDAALRPLAKCSELLVLKLGLCSSISDKGLAFISS-SCGKLIELDLYRCNSITDD 522
Query: 364 GLAALTS-LTGLTHLDL-FGARITDSGAAYLRNFKNLRSLE------ICGGGLTDA--GL 413
GLAAL + + L+L + +ITD+G +L + + L +LE I G G++ G
Sbjct: 523 GLAALANGCKKIKMLNLCYCNKITDTGLGHLGSLEELTNLELRCLVRITGIGISSVAIGC 582
Query: 414 TGLVSLNVSNSR-ITSAGLRHLKPLK-NLRSLTLESCKVT 451
L+ +++ + AGL L NLR LT+ C+VT
Sbjct: 583 KNLIEIDLKRCYSVDDAGLWALARYALNLRQLTISYCQVT 622
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 32/230 (13%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL- 102
+++K ++ IA+ +L +DL+ V D+ L L CS L L C ISD GL +
Sbjct: 443 ISEKGLEQIATSCPNLKEIDLTDCGVNDAALRPLAKCSELLVLKLGLCSSISDKGLAFIS 502
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
L L R N+IT G+ A A G K++ LN+
Sbjct: 503 SSCGKLIELDLYRCNSITDDGLAALA-----------------------NGCKKIKMLNL 539
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISC-SKVTDSGIAYLK-GLQKLTLLNLEGC-PVTAA 219
+CN ITD+ + L L L +L++ C ++T GI+ + G + L ++L+ C V A
Sbjct: 540 CYCNKITDTGLGHLGSLEELTNLELRCLVRITGIGISSVAIGCKNLIEIDLKRCYSVDDA 599
Query: 220 CLDSLSALG-SLFYLNLNRCQLSDDG-CEKFSKIGSL---KVLNLGFNEI 264
L +L+ +L L ++ CQ++ G C S + L K+++L + I
Sbjct: 600 GLWALARYALNLRQLTISYCQVTGLGLCHLLSSLRCLQDVKMVHLSWVSI 649
>gi|158429246|pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 166/358 (46%), Gaps = 56/358 (15%)
Query: 92 IQISDGGLEHLRGLSNLTSLS--FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLV 149
I S+ L + L NLT L NN I + A L NL L L + +
Sbjct: 68 INFSNNQLTDITPLKNLTKLVDILMNNNQIA--DITPLANLTNLTGLTL-----FNNQIT 120
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
++ L L +LN + T SD+ LSGLT+L+ L S ++VTD LK L LT
Sbjct: 121 DIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTD-----LKPLANLT-- 173
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
LE +++ + +S L K + + SL N N+I+D +
Sbjct: 174 TLERLDISSNKVSDISVLA------------------KLTNLESLIATN---NQISD--I 210
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
L LTNL+ L+L+ + D G L L NL L+L++ Q+ S L LSGLT L +
Sbjct: 211 TPLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQI--SNLAPLSGLTKLTEL 266
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGA 389
L IS+ + LAGL++L +L L+ Q+ D ++ +++L LT+L L+ I+D
Sbjct: 267 KLGANQISN--ISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD--I 320
Query: 390 AYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAG---LRHLKPLKNLRSLT 444
+ + + L+ L ++D N++N SAG + L PL NL +T
Sbjct: 321 SPVSSLTKLQRLFFYNNKVSDVSSLA----NLTNINWLSAGHNQISDLTPLANLTRIT 374
>gi|395845618|ref|XP_003795524.1| PREDICTED: F-box/LRR-repeat protein 14 isoform 3 [Otolemur
garnettii]
Length = 387
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 162/305 (53%), Gaps = 32/305 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 325 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLP 381
Query: 349 SLKSL 353
LK L
Sbjct: 382 CLKRL 386
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 38/302 (12%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-K 273
LS +G + R + +GC +G ++ ++TD L H+ +
Sbjct: 180 R-------HLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTDLSLKHISR 225
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESIN 330
GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L ++
Sbjct: 226 GLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLD 285
Query: 331 LSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITD 386
+SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ RITD
Sbjct: 286 VSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITD 345
Query: 387 SG 388
G
Sbjct: 346 KG 347
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSAL 227
L I C ++TD G+ + + L +LT ++L GC +T L+ ++ L
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQL 380
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 272 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 322
++G+ N+ESLNL C G+G + + L L C +++D+ +G ++L G
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIA-QYLKG 144
Query: 323 LTNLE---SINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLD 378
L LE N++ TG+ L GL LKSLNL + R ++D G+ L +T
Sbjct: 145 LEVLELGGCSNITNTGL----LLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMT------ 194
Query: 379 LFGARITDSGAAYLRNFKNLRSLEICGGGLTD-------AGLTGLVSLNVSN-SRITSAG 430
R G L +L+ C LTD GLTGL LN+S I+ AG
Sbjct: 195 ----RSAAEGCLGLEQL----TLQDCQK-LTDLSLKHISRGLTGLRLLNLSFCGGISDAG 245
Query: 431 LRHLKPLKNLRSLTLESC 448
L HL + +LRSL L SC
Sbjct: 246 LLHLSHMGSLRSLNLRSC 263
>gi|325111037|ref|YP_004272105.1| hypothetical protein Plabr_4512 [Planctomyces brasiliensis DSM
5305]
gi|324971305|gb|ADY62083.1| hypothetical protein Plabr_4512 [Planctomyces brasiliensis DSM
5305]
Length = 407
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 145/301 (48%), Gaps = 30/301 (9%)
Query: 184 SLQISCSKV--TDSGIAYLKGLQKLTLL-NLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
+L++ C + D + LK +K T++ +L ++ LDSL L L L ++
Sbjct: 75 TLELDCRRAHFPDGSLELLKVFEKQTVIVDLSLSNISDDSLDSLKDFNRLEVLILAHTRI 134
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL-TGL 299
+ ++ S I SL L+L E DE + L L L+ L + + + ++G L T +
Sbjct: 135 TGSRLDQLSSITSLHTLDLTAIEFDDESVPSLASLRQLQRLKVPTSKLSEDGFALLCTRM 194
Query: 300 CNLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSFT-GISDGSLRKLAGLSSLKSLNLDA 357
L+ L+LS + V +S L HL+ + L + +SF I D ++ LAGL +LK L+L+
Sbjct: 195 PFLRSLDLSGRRGVANSWLTHLAKMPRLNVLGVSFAKNIDDDAIPLLAGLPALKWLSLEG 254
Query: 358 RQITDTGLAALTSLTGLTHLDL----FGARITDSGAAYLRNF--------KNLRSLEICG 405
IT AAL +LT L L L F A T + LR+ KN+ SL+
Sbjct: 255 TSITGMFPAALGNLTNLDTLSLAHCTFNAPQTLESLSKLRSLKQLNLNDCKNITSLKFL- 313
Query: 406 GGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV------TANDIKRLQ 459
G++ L ++ + N+ +T A L+ L+ L+ + L C++ T + +K LQ
Sbjct: 314 -----RGMSHLEAIGLKNTNLTDAILKELQYCLQLKYVDLTRCRIGKETISTISQLKLLQ 368
Query: 460 S 460
+
Sbjct: 369 T 369
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 146/324 (45%), Gaps = 41/324 (12%)
Query: 26 EAFRDCALQDL-CL-GQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNL 83
E++RD + +L C +P + + + V Q + VDLS S+++D L LKD + L
Sbjct: 68 ESYRDASTLELDCRRAHFPDGSLELLKVFEKQT---VIVDLSLSNISDDSLDSLKDFNRL 124
Query: 84 QSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA--QGMKAFAGLINLVKLDLER- 140
+ L +I+ L+ L +++L +L AI + + + A L L +L +
Sbjct: 125 EVLILAHT-RITGSRLDQLSSITSLHTLDL---TAIEFDDESVPSLASLRQLQRLKVPTS 180
Query: 141 ----------CTRI---------------HGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
CTR+ + L +L + +L L + + I D +
Sbjct: 181 KLSEDGFALLCTRMPFLRSLDLSGRRGVANSWLTHLAKMPRLNVLGVSFAKNIDDDAIPL 240
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA-CLDSLSALGSLFYLN 234
L+GL LK L + + +T A L L L L+L C A L+SLS L SL LN
Sbjct: 241 LAGLPALKWLSLEGTSITGMFPAALGNLTNLDTLSLAHCTFNAPQTLESLSKLRSLKQLN 300
Query: 235 LNRCQLSDDGCEKFSK-IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
LN C+ + KF + + L+ + L +TD L L+ L+ ++L C IG E +
Sbjct: 301 LNDCK--NITSLKFLRGMSHLEAIGLKNTNLTDAILKELQYCLQLKYVDLTRCRIGKETI 358
Query: 294 VNLTGLCNLKCLELSDTQVGSSGL 317
++ L L+ + LS TQ+ S +
Sbjct: 359 STISQLKLLQTISLSGTQIDSDNI 382
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 29/218 (13%)
Query: 59 LLSVDLSGSD-VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
L S+DLSG V +S L HL L L +F I D + L GL L LS
Sbjct: 197 LRSLDLSGRRGVANSWLTHLAKMPRLNVLGVSFAKNIDDDAIPLLAGLPALKWLSLE-GT 255
Query: 118 AITAQGMKAFAGLINLVKLDLERCT-RIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+IT A L NL L L CT L +L L L+ LN+ C IT +K L
Sbjct: 256 SITGMFPAALGNLTNLDTLSLAHCTFNAPQTLESLSKLRSLKQLNLNDCKNITS--LKFL 313
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
G+++L+++ + + +TD A LK LQ CL L Y++L
Sbjct: 314 RGMSHLEAIGLKNTNLTD---AILKELQ--------------YCL-------QLKYVDLT 349
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG 274
RC++ + S++ L+ ++L +I + ++ ++
Sbjct: 350 RCRIGKETISTISQLKLLQTISLSGTQIDSDNIIPIRS 387
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 136/324 (41%), Gaps = 30/324 (9%)
Query: 112 SFRRNNAITAQGMKAFAGLI---NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCI 168
S R + IT + + A A + ++LD R G L LK K + + I
Sbjct: 51 SIRLSGLITQERIDAIAESYRDASTLELDCRRAHFPDGSLELLKVFEKQTVIVDLSLSNI 110
Query: 169 TDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG 228
+D + L L+ L ++ +++T S + L + L L+L + SL++L
Sbjct: 111 SDDSLDSLKDFNRLEVLILAHTRITGSRLDQLSSITSLHTLDLTAIEFDDESVPSLASLR 170
Query: 229 SLFYLNLNRCQLSDDGCEKF-SKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLD-S 285
L L + +LS+DG +++ L+ L+L G + + L HL + L L + +
Sbjct: 171 QLQRLKVPTSKLSEDGFALLCTRMPFLRSLDLSGRRGVANSWLTHLAKMPRLNVLGVSFA 230
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG------ 339
I D+ + L GL LK L L T + L LTNL++++L+ +
Sbjct: 231 KNIDDDAIPLLAGLPALKWLSLEGTSITGMFPAALGNLTNLDTLSLAHCTFNAPQTLESL 290
Query: 340 ------------------SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG 381
SL+ L G+S L+++ L +TD L L L ++DL
Sbjct: 291 SKLRSLKQLNLNDCKNITSLKFLRGMSHLEAIGLKNTNLTDAILKELQYCLQLKYVDLTR 350
Query: 382 ARITDSGAAYLRNFKNLRSLEICG 405
RI + + K L+++ + G
Sbjct: 351 CRIGKETISTISQLKLLQTISLSG 374
>gi|386336010|ref|YP_006032180.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
gi|334198460|gb|AEG71644.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
Length = 1053
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 181/412 (43%), Gaps = 30/412 (7%)
Query: 58 SLLSVDLSG---SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
S+ +DLSG S V+++GL L L+SLD + +I D ++ L ++LTSL+
Sbjct: 648 SVRRLDLSGCTGSAVSEAGLAVLARLP-LESLDLSGT-RIGDREVQALASSTSLTSLNLS 705
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNC-ITDSDM 173
N I G +A L L++ G+ L L SL ++ I ++ +
Sbjct: 706 -GNRIGDAGARALGRNTVLTALNVSANPIRDTGVQALADSRSLTSLELRGIGIGIGEASI 764
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
L+ T L+SL IS + +++ A L Q L L C +T L+ + SL L
Sbjct: 765 AALASNTVLRSLDISSNDLSEQSAAELARNQTLASLKANACGLTNGMAQQLARIRSLRTL 824
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+ + D G ++ SL+ LNL N IT + L L+ L SL++ G GD G
Sbjct: 825 EVGSNSIGDTGVLAIARNASLRTLNLSHNPITLQGLCPLELSRTLTSLDVSGIGCGDRGA 884
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
+ L+ L L+L +GS+G + L+ L S++L I + + LA L SL
Sbjct: 885 LLLSKNRVLTSLKLGFNGIGSAGAQRLAANRTLISLDLRGNTIDVDAAKALANTGRLTSL 944
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL 413
N+ ++ D +AL LT LD+ R++ A L AG
Sbjct: 945 NVSDCKLDDAAASALAESLTLTSLDVSVNRLSGRAAQAL------------------AGN 986
Query: 414 TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 465
L SLN+S++ I G R L S +L ANDI +R L N
Sbjct: 987 ATLTSLNISHNHIGPDGARALA-----ESPSLTVLDARANDIGEAGARALEN 1033
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 147/350 (42%), Gaps = 28/350 (8%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
+ D+ + +AS +SL S++LSG+ + D+G L + L +L+ + I D G++ L
Sbjct: 685 IGDREVQALASS-TSLTSLNLSGNRIGDAGARALGRNTVLTALNVS-ANPIRDTGVQALA 742
Query: 104 GLSNLTSLSFRRNN-AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
+LTSL R I + A A L LD+ L L SL
Sbjct: 743 DSRSLTSLELRGIGIGIGEASIAALASNTVLRSLDISSNDLSEQSAAELARNQTLASLKA 802
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
C +T+ + L+ + +L++L++ + + D+G+ + L LNL P+T L
Sbjct: 803 NACG-LTNGMAQQLARIRSLRTLEVGSNSIGDTGVLAIARNASLRTLNLSHNPITLQGLC 861
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI---------TDECLVHL- 272
L +L L+++ D G SK L L LGFN I + L+ L
Sbjct: 862 PLELSRTLTSLDVSGIGCGDRGALLLSKNRVLTSLKLGFNGIGSAGAQRLAANRTLISLD 921
Query: 273 -----------KGLTN---LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
K L N L SLN+ C + D L L L++S ++ +
Sbjct: 922 LRGNTIDVDAAKALANTGRLTSLNVSDCKLDDAAASALAESLTLTSLDVSVNRLSGRAAQ 981
Query: 319 HLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
L+G L S+N+S I R LA SL L+ A I + G AL
Sbjct: 982 ALAGNATLTSLNISHNHIGPDGARALAESPSLTVLDARANDIGEAGARAL 1031
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 135/315 (42%), Gaps = 14/315 (4%)
Query: 23 VSLEAFRDCALQDLC----------LGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDS 72
VS RD +Q L G G+ + + +AS + L S+D+S +D+++
Sbjct: 728 VSANPIRDTGVQALADSRSLTSLELRGIGIGIGEASIAALASN-TVLRSLDISSNDLSEQ 786
Query: 73 GLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLIN 132
L L SL N C +++G + L + +L +L +N+I G+ A A +
Sbjct: 787 SAAELARNQTLASLKANAC-GLTNGMAQQLARIRSLRTLEVG-SNSIGDTGVLAIARNAS 844
Query: 133 LVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKV 192
L L+L GL L+ L SL++ C D LS L SL++ + +
Sbjct: 845 LRTLNLSHNPITLQGLCPLELSRTLTSLDVSGIGC-GDRGALLLSKNRVLTSLKLGFNGI 903
Query: 193 TDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIG 252
+G L + L L+L G + +L+ G L LN++ C+L D ++
Sbjct: 904 GSAGAQRLAANRTLISLDLRGNTIDVDAAKALANTGRLTSLNVSDCKLDDAAASALAESL 963
Query: 253 SLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQV 312
+L L++ N ++ L G L SLN+ IG +G L +L L+ +
Sbjct: 964 TLTSLDVSVNRLSGRAAQALAGNATLTSLNISHNHIGPDGARALAESPSLTVLDARANDI 1023
Query: 313 GSSGLRHLSGLTNLE 327
G +G R L T ++
Sbjct: 1024 GEAGARALENNTRMQ 1038
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
+ +L GL LESLN+ IGD+G L +LK L ++ +G++G R L+ L
Sbjct: 146 AIAYLAGLP-LESLNVAGADIGDDGARLLAANPSLKTLNAANGGIGAAGARALAESPVLT 204
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL-------- 379
S++L+ GI D R LAG SL +L + +TD G AL LT LDL
Sbjct: 205 SLDLTQNGIGDEGARALAGSRSLTNLAVLNCLVTDVGAQALAGNRTLTALDLGNLITETD 264
Query: 380 ----------FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLV------SLNVSN 423
IT GA L ++L SL I G D G+ L SLNV+
Sbjct: 265 NELEQAGYDRTANEITAQGAWALAQNRSLTSLSIQGNLCGDGGVQALARNRTLTSLNVAY 324
Query: 424 SRITSA 429
+ +T A
Sbjct: 325 TDMTPA 330
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 153/390 (39%), Gaps = 46/390 (11%)
Query: 65 SGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGG--LEHLRGLSNLTSLSFRRNNAITAQ 122
S D+G H D + Q + S G L L GL++L L N ++A
Sbjct: 14 SAPATPDTGARHGPDQTGEQPA---YAPARSSAGVALSPLGGLASL-RLDAASANTVSAP 69
Query: 123 GMKAFAGLINLVKLDLERCTR--IHG--GLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
+ A + L+R T +H L L L SL +K +TD P +
Sbjct: 70 RILPPAPCHDPRAAALQRVTHLSVHDRRALSELHNYPNLTSLQLKGNLTLTDLKALPAT- 128
Query: 179 LTNLKSLQISC---SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L+ L +S S + IAYL GL L LN+ G + L+A SL LN
Sbjct: 129 ---LRHLDLSACTGSAKSSGAIAYLAGL-PLESLNVAGADIGDDGARLLAANPSLKTLNA 184
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG---LTNLESLNLDSCGIGDEG 292
+ G ++ L L+L N I DE L G LTNL LN C + D G
Sbjct: 185 ANGGIGAAGARALAESPVLTSLDLTQNGIGDEGARALAGSRSLTNLAVLN---CLVTDVG 241
Query: 293 LVNLTGLCNLKCLEL------SDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAG 346
L G L L+L +D ++ +G + + I+ LA
Sbjct: 242 AQALAGNRTLTALDLGNLITETDNELEQAG------------YDRTANEITAQGAWALAQ 289
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI-CG 405
SL SL++ D G+ AL LT L++ +T + A L L SL +
Sbjct: 290 NRSLTSLSIQGNLCGDGGVQALARNRTLTSLNVAYTDMTPASATELARNPVLTSLSVRWN 349
Query: 406 GGLTDAGLTGLV---SLNVSNSRITSAGLR 432
GL DAG+ L SL + ++R T G R
Sbjct: 350 YGLGDAGVVELAKSPSLTLLDARSTGMGER 379
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 34/262 (12%)
Query: 56 GSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
G L S++++G+D+ D G L +L++L+ + G LTSL +
Sbjct: 152 GLPLESLNVAGADIGDDGARLLAANPSLKTLNAANGGIGAAGARALAES-PVLTSLDLTQ 210
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
N I +G +A AG +L L + C G L G L +L++ N IT++D +
Sbjct: 211 NG-IGDEGARALAGSRSLTNLAVLNCLVTDVGAQALAGNRTLTALDLG--NLITETDNE- 266
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
+ +++T G L + LT L+++G
Sbjct: 267 ----LEQAGYDRTANEITAQGAWALAQNRSLTSLSIQG---------------------- 300
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD-SCGIGDEGLV 294
N C D G + ++ +L LN+ + ++T L L SL++ + G+GD G+V
Sbjct: 301 NLC--GDGGVQALARNRTLTSLNVAYTDMTPASATELARNPVLTSLSVRWNYGLGDAGVV 358
Query: 295 NLTGLCNLKCLELSDTQVGSSG 316
L +L L+ T +G G
Sbjct: 359 ELAKSPSLTLLDARSTGMGERG 380
>gi|224140535|ref|XP_002323638.1| predicted protein [Populus trichocarpa]
gi|222868268|gb|EEF05399.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 191/438 (43%), Gaps = 71/438 (16%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSGSDVTDS------GLIHLKD----------------- 79
GV+D + +IA + + S+DLS +T+ L HL+D
Sbjct: 192 GVSDLGVGLIAVKCKEIRSLDLSYLPITNKCLPSILKLQHLEDIVLEGCFGIDDDSLAAL 251
Query: 80 ---CSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
C ++++LD + C IS GL L G +L L+ + +T + L L
Sbjct: 252 KHGCKSMKALDISSCQHISHVGLSSLISGAGSLQQLTLSYSCPVTLALANSLKRLSMLQS 311
Query: 136 LDLERCTRIHGGLVNL-KGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQIS-CSKV 192
+ L+ C GL + + L L++ C +TD + L + +LK L I+ C K+
Sbjct: 312 VKLDGCAVTSAGLTAIGNWCITLSELSLSKCVGVTDEGLSSLVTKHKDLKKLDITCCRKI 371
Query: 193 TDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI 251
TD IAY+ LT L +E C + + F L RCQ
Sbjct: 372 TDVSIAYITNSCTNLTSLRMESCTLVPS---------EAFVLIGQRCQF----------- 411
Query: 252 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDT 310
L+ L+L NEI DE L + + L SL L C I DEGL ++ +KC +L++
Sbjct: 412 --LEELDLTDNEIDDEGLKSISRCSKLSSLKLGICLNISDEGLSHV----GMKCSKLTEL 465
Query: 311 QV-GSSGLRHL------SGLTNLESINLSF-TGISDGSLRKLAGLSSLKSL-NLDARQIT 361
+ S+G+ L G LE IN+S+ I+D SL L+ S L + + IT
Sbjct: 466 DLYRSAGITDLGILAISRGCPGLEMINMSYCIDITDSSLLSLSKCSRLNTFESRGCPLIT 525
Query: 362 DTGLAAL-TSLTGLTHLDLFGAR-ITDSGAAYLRNF-KNLRSLEICGGGLTDAGLTGLVS 418
GLAA+ L LD+ I D+ L +F +NLR + + +TD GL L S
Sbjct: 526 SLGLAAIAVGCKQLIKLDIKKCHNIGDAAMLPLAHFSQNLRQITLSYSSVTDVGLLALAS 585
Query: 419 LNVSNSRITSAGLRHLKP 436
++ S +T L+ L P
Sbjct: 586 ISCLQS-MTVLHLKGLTP 602
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 137/494 (27%), Positives = 219/494 (44%), Gaps = 88/494 (17%)
Query: 42 PGVNDKWMDVIASQ-GSSLLSVDLSGSDV-TDSGLIHL-KDCSNLQSLDFNFCIQISDGG 98
P +ND ++VI++ SL S+DLS S + +GL+ L +C NL S+D + ++ D
Sbjct: 87 PRINDNSLNVISNTCKDSLNSIDLSRSRFFSYNGLMSLASNCKNLVSIDLSNATELRDAA 146
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFA----------------------GLI----- 131
+ + NL L R IT G+ A GLI
Sbjct: 147 AAAVAEVKNLERLWLGRCKLITDMGIGCIAVGCKKLRLISLKWCIGVSDLGVGLIAVKCK 206
Query: 132 NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQI-SC 189
+ LDL + L ++ L LE + ++ C I D + L G ++K+L I SC
Sbjct: 207 EIRSLDLSYLPITNKCLPSILKLQHLEDIVLEGCFGIDDDSLAALKHGCKSMKALDISSC 266
Query: 190 SKVTDSGIAYL----KGLQKLTL----------------------LNLEGCPVTAACLDS 223
++ G++ L LQ+LTL + L+GC VT+A
Sbjct: 267 QHISHVGLSSLISGAGSLQQLTLSYSCPVTLALANSLKRLSMLQSVKLDGCAVTSA---G 323
Query: 224 LSALG----SLFYLNLNRCQ-LSDDGCEKF-SKIGSLKVLNLG-FNEITDECLVHL-KGL 275
L+A+G +L L+L++C ++D+G +K LK L++ +ITD + ++
Sbjct: 324 LTAIGNWCITLSELSLSKCVGVTDEGLSSLVTKHKDLKKLDITCCRKITDVSIAYITNSC 383
Query: 276 TNLESLNLDSCG-IGDEGLVNLTGLCN-LKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
TNL SL ++SC + E V + C L+ L+L+D ++ GL+ +S + L S+ L
Sbjct: 384 TNLTSLRMESCTLVPSEAFVLIGQRCQFLEELDLTDNEIDDEGLKSISRCSKLSSLKLGI 443
Query: 334 T-GISDGSLRKLAGLSSLKSLNLDARQ---ITDTGLAALTS-LTGLTHLDL-FGARITDS 387
ISD L + G+ K LD + ITD G+ A++ GL +++ + ITDS
Sbjct: 444 CLNISDEGLSHV-GMKCSKLTELDLYRSAGITDLGILAISRGCPGLEMINMSYCIDITDS 502
Query: 388 GAAYLRNFKNLRSLEICGGGL-TDAGLTG-------LVSLNVSNSR-ITSAGLRHLKPL- 437
L L + E G L T GL L+ L++ I A + L
Sbjct: 503 SLLSLSKCSRLNTFESRGCPLITSLGLAAIAVGCKQLIKLDIKKCHNIGDAAMLPLAHFS 562
Query: 438 KNLRSLTLESCKVT 451
+NLR +TL VT
Sbjct: 563 QNLRQITLSYSSVT 576
>gi|158429244|pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 166/358 (46%), Gaps = 56/358 (15%)
Query: 92 IQISDGGLEHLRGLSNLTSLS--FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLV 149
I S+ L + L NLT L NN I + A L NL L L + +
Sbjct: 68 INFSNNQLTDITPLKNLTKLVDILMNNNQIA--DITPLANLTNLTGLTL-----FNNQIT 120
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
++ L L +LN + T SD+ LSGLT+L+ L S ++VTD LK L LT
Sbjct: 121 DIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTD-----LKPLANLT-- 173
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
LE +++ + +S L K + + SL N N+I+D +
Sbjct: 174 TLERLDISSNKVSDISVLA------------------KLTNLESLIATN---NQISD--I 210
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
L LTNL+ L+L+ + D G L L NL L+L++ Q+ S L LSGLT L +
Sbjct: 211 TPLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQI--SNLAPLSGLTKLTEL 266
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGA 389
L IS+ + LAGL++L +L L+ Q+ D ++ +++L LT+L L+ I+D
Sbjct: 267 KLGANQISN--ISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD--I 320
Query: 390 AYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAG---LRHLKPLKNLRSLT 444
+ + + L+ L ++D N++N SAG + L PL NL +T
Sbjct: 321 SPVSSLTKLQRLFFSNNKVSDVSSLA----NLTNINWLSAGHNQISDLTPLANLTRIT 374
>gi|158429242|pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 166/358 (46%), Gaps = 56/358 (15%)
Query: 92 IQISDGGLEHLRGLSNLTSLS--FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLV 149
I S+ L + L NLT L NN I + A L NL L L + +
Sbjct: 68 INFSNNQLTDITPLKNLTKLVDILMNNNQIA--DITPLANLTNLTGLTL-----FNNQIT 120
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
++ L L +LN + T SD+ LSGLT+L+ L S ++VTD LK L LT
Sbjct: 121 DIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTD-----LKPLANLT-- 173
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
LE +++ + +S L K + + SL N N+I+D +
Sbjct: 174 TLERLDISSNKVSDISVLA------------------KLTNLESLIATN---NQISD--I 210
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
L LTNL+ L+L+ + D G L L NL L+L++ Q+ S L LSGLT L +
Sbjct: 211 TPLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQI--SNLAPLSGLTKLTEL 266
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGA 389
L IS+ + LAGL++L +L L+ Q+ D ++ +++L LT+L L+ I+D
Sbjct: 267 KLGANQISN--ISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD--I 320
Query: 390 AYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAG---LRHLKPLKNLRSLT 444
+ + + L+ L ++D N++N SAG + L PL NL +T
Sbjct: 321 SPVSSLTKLQRLFFYNNKVSDVSSLA----NLTNINWLSAGHNQISDLTPLANLTRIT 374
>gi|440802726|gb|ELR23655.1| leucine rich repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 634
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 172/354 (48%), Gaps = 65/354 (18%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLRGLSNLTSL-----SFRRNNAITAQGMKAFAGLINLVK 135
LQ+L+ ++C I++ GL++LRGL++LTSL SFR +T++G+K+ +L
Sbjct: 280 PQLQTLNLSYCPNITNHGLKYLRGLTSLTSLDLCSPSFR----VTSEGLKSLPS--SLRS 333
Query: 136 LDLERCTRI-HGGLVNLKGL-MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKV 192
LD+ ++ G+ L+ + L+ LNI CN +T+ M+ L L+++ +S C +
Sbjct: 334 LDISYMDKLTDEGIKALRAVCPDLQVLNISKCNKVTNDGMRFLPA--KLRTIFLSHCYNI 391
Query: 193 TDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIG 252
TD GIA L V L++ + + L+DDG +
Sbjct: 392 TDEGIANLA--------------VAVPLLEN---------FHFSYSSLTDDGVRHLPR-- 426
Query: 253 SLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSD-T 310
+LK LNL F ++T+E + HL + L+ S I DEGL L ++ L+LS
Sbjct: 427 ALKALNLSFCPKLTNEGMRHLPPHLHTLLLSY-SYKITDEGLRALPP--SIATLKLSRFF 483
Query: 311 QVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAAL 368
++ GL+HL L S++LS +SD + +L +L LNL ITD G+A L
Sbjct: 484 EITDDGLQHLP--PALRSLDLSLCDRVSDQGMSRLP--PTLAELNLSRCDGITDAGVAQL 539
Query: 369 TSLTGLTHLDL-FGARITDSGAAYLRNF-KNLRSL------EICGGGLTDAGLT 414
L LDL F +TD A LR+ K L SL EI G L D L+
Sbjct: 540 PR--SLGKLDLSFTKHVTD---ACLRSLPKALTSLNLSSCPEITGEALADLPLS 588
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 151/332 (45%), Gaps = 75/332 (22%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCS---KVTDSGIAYLKGLQKLTLLNLE 212
+L++LN+ +C IT+ +K L GLT+L SL + CS +VT G L+
Sbjct: 281 QLQTLNLSYCPNITNHGLKYLRGLTSLTSLDL-CSPSFRVTSEG--------------LK 325
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI-GSLKVLNLGF-NEITDECLV 270
P + LD + Y++ +L+D+G + + L+VLN+ N++T++ +
Sbjct: 326 SLPSSLRSLD-------ISYMD----KLTDEGIKALRAVCPDLQVLNISKCNKVTNDGMR 374
Query: 271 HLKGLTNLESLNLDSC-GIGDEGLVNL-TGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
L L ++ L C I DEG+ NL + L+ S + + G+RHL L++
Sbjct: 375 FLPA--KLRTIFLSHCYNITDEGIANLAVAVPLLENFHFSYSSLTDDGVRHLP--RALKA 430
Query: 329 INLSF------------------------TGISDGSLRKLAGLSSLKSLNLDA-RQITDT 363
+NLSF I+D LR L S+ +L L +ITD
Sbjct: 431 LNLSFCPKLTNEGMRHLPPHLHTLLLSYSYKITDEGLRALP--PSIATLKLSRFFEITDD 488
Query: 364 GLAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLV----S 418
GL L L LDL R++D G + L +L C G+TDAG+ L
Sbjct: 489 GLQHLP--PALRSLDLSLCDRVSDQGMSRLPPTLAELNLSRC-DGITDAGVAQLPRSLGK 545
Query: 419 LNVSNSR-ITSAGLRHLKPLKNLRSLTLESCK 449
L++S ++ +T A LR L K L SL L SC
Sbjct: 546 LDLSFTKHVTDACLRSLP--KALTSLNLSSCP 575
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 134/274 (48%), Gaps = 24/274 (8%)
Query: 28 FRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLD 87
F L+ + L + D+ + +A L + S S +TD G+ HL L++L+
Sbjct: 375 FLPAKLRTIFLSHCYNITDEGIANLAVAVPLLENFHFSYSSLTDDGVRHLPRA--LKALN 432
Query: 88 FNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HG 146
+FC ++++ G+ HL + LS+ + IT +G++A I +K L R I
Sbjct: 433 LSFCPKLTNEGMRHLPPHLHTLLLSY--SYKITDEGLRALPPSIATLK--LSRFFEITDD 488
Query: 147 GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYL-KGLQ 204
GL +L L SL++ C+ ++D M L L L +S C +TD+G+A L + L
Sbjct: 489 GLQHLPP--ALRSLDLSLCDRVSDQGMSRLP--PTLAELNLSRCDGITDAGVAQLPRSLG 544
Query: 205 KLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIG-SLKVLNLGFNE 263
KL L + VT ACL SL +L LNL+ C + E + + SL L L E
Sbjct: 545 KLDLSFTKH--VTDACLRSLPK--ALTSLNLSSC--PEITGEALADLPLSLSHLFLSHCE 598
Query: 264 -ITDECLVHLKGLTNLESLNLDSC-GIGDEGLVN 295
+TD+ L LE+L++ SC G+ ++ L++
Sbjct: 599 KVTDKIFTSLP--RPLETLDISSCSGVVEKYLLD 630
>gi|290991352|ref|XP_002678299.1| predicted protein [Naegleria gruberi]
gi|284091911|gb|EFC45555.1| predicted protein [Naegleria gruberi]
Length = 383
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 155/338 (45%), Gaps = 48/338 (14%)
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC 141
NL+SLD +I +E++ L NLT+ S R +N I + ++ + L L+
Sbjct: 65 NLKSLDVGLVQEICYENVEYISELQNLTTFSIRYSN-IGRKHLQIIGEMSQLTDLN---- 119
Query: 142 TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYL 200
I G +N + P+ LT + SL + CS + D GI +
Sbjct: 120 --ISGNPIN---------------------SLLPIRPLTRITSLSAADCSFLGDDGIYPI 156
Query: 201 ---KGLQKLTL----LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGS 253
KGLQKL L + EGC + +LS +L+LN ++ D ++ SK+
Sbjct: 157 VNFKGLQKLNLSSNGITWEGCMFISEKFPNLS------HLSLNETRICDGAIKRLSKMKQ 210
Query: 254 LKVLNLGFN-EITDECLVHL-KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQ 311
L L++G N +IT E + + LTNL LN+ S + DEGL+ L L+ L + Q
Sbjct: 211 LTYLDVGNNAKITMEGIKLISNNLTNLTHLNISSNNVTDEGLMMACDLPKLQELFVGHNQ 270
Query: 312 VGSSGLRHLSGL--TNLESINLSFTGISDGSLRKL-AGLSSLKSLNLDARQITDTGLAAL 368
+ SG+ S L+ ++LS I+ + L L++LK L L ITD + +
Sbjct: 271 ITDSGINEFSEKIGNKLKILSLSRNNITSLCTQYLCTKLTNLKKLYLAGVSITDEDVKLI 330
Query: 369 TS-LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
+ L +LD+ +TD Y+ ++LR +++ G
Sbjct: 331 CQCMKLLIYLDVSWNNVTDKSLEYVIASESLREVDVNG 368
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 160/349 (45%), Gaps = 27/349 (7%)
Query: 109 TSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCI 168
TSLS+R +A ++ LI V ++E LV+ L L+SL++ I
Sbjct: 29 TSLSYR--DACLIAKFESLEELIGEVGDEME-------ALVDY--LPNLKSLDVGLVQEI 77
Query: 169 TDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG 228
+++ +S L NL + I S + + + + +LT LN+ G P+ + L + L
Sbjct: 78 CYENVEYISELQNLTTFSIRYSNIGRKHLQIIGEMSQLTDLNISGNPINS--LLPIRPLT 135
Query: 229 SLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGFNEITDE-CLVHLKGLTNLESLNLDSC 286
+ L+ C L DDG L+ LNL N IT E C+ + NL L+L+
Sbjct: 136 RITSLSAADCSFLGDDGIYPIVNFKGLQKLNLSSNGITWEGCMFISEKFPNLSHLSLNET 195
Query: 287 GIGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLSG-LTNLESINLSFTGISDGSLRKL 344
I D + L+ + L L++ ++ ++ G++ +S LTNL +N+S ++D L
Sbjct: 196 RICDGAIKRLSKMKQLTYLDVGNNAKITMEGIKLISNNLTNLTHLNISSNNVTDEGLMMA 255
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTG--LTHLDLFGARITDSGAAYL-RNFKNLRSL 401
L L+ L + QITD+G+ + G L L L IT YL NL+ L
Sbjct: 256 CDLPKLQELFVGHNQITDSGINEFSEKIGNKLKILSLSRNNITSLCTQYLCTKLTNLKKL 315
Query: 402 EICGGGLTDAG-------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSL 443
+ G +TD + L+ L+VS + +T L ++ ++LR +
Sbjct: 316 YLAGVSITDEDVKLICQCMKLLIYLDVSWNNVTDKSLEYVIASESLREV 364
>gi|290983780|ref|XP_002674606.1| predicted protein [Naegleria gruberi]
gi|284088197|gb|EFC41862.1| predicted protein [Naegleria gruberi]
Length = 232
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 103/199 (51%)
Query: 203 LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
+ +LT L++ + A + + L +L LN+ LS +G E K+ L VLN+ FN
Sbjct: 1 MNRLTKLSIGFNRLHDAGAEIIGQLTTLTELNVAENFLSHEGAESICKLTQLTVLNINFN 60
Query: 263 EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG 322
I D ++ L+ L +L++ S I +EG +++ L L L+L+D ++ G ++L
Sbjct: 61 GIGDLGAAYIGELSKLTNLSIASNFITEEGARSISKLKQLTILDLNDNRIACKGAQYLGE 120
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
L+ L+ +NL I D + ++ L +L LNL I + G+ ++ L LT L++
Sbjct: 121 LSQLKKLNLLANYIQDKGAKSVSQLENLTELNLTRNSIQNEGIKSIIELPLLTKLNISQN 180
Query: 383 RITDSGAAYLRNFKNLRSL 401
RI++ A + K L+ L
Sbjct: 181 RISNEEAQLISGMKQLKEL 199
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 18/225 (8%)
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
+L D G E ++ +L LN+ N ++ E + LT L LN++ GIGD G +
Sbjct: 13 RLHDAGAEIIGQLTTLTELNVAENFLSHEGAESICKLTQLTVLNINFNGIGDLGAAYIGE 72
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L L L ++ + G R +S L L ++L+ I+ + L LS LK LNL A
Sbjct: 73 LSKLTNLSIASNFITEEGARSISKLKQLTILDLNDNRIACKGAQYLGELSQLKKLNLLAN 132
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS 418
I D G +++ L LT L+L I + G K++ L + L
Sbjct: 133 YIQDKGAKSVSQLENLTELNLTRNSIQNEG------IKSIIELPL------------LTK 174
Query: 419 LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDL 463
LN+S +RI++ + + +K L+ L ++ K+L +L
Sbjct: 175 LNISQNRISNEEAQLISGMKQLKELVATHTQIDNEGAKKLHEMEL 219
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 2/203 (0%)
Query: 143 RIHGGLVNLKG-LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLK 201
R+H + G L L LN+ N ++ + + LT L L I+ + + D G AY+
Sbjct: 13 RLHDAGAEIIGQLTTLTELNVAE-NFLSHEGAESICKLTQLTVLNINFNGIGDLGAAYIG 71
Query: 202 GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF 261
L KLT L++ +T S+S L L L+LN +++ G + ++ LK LNL
Sbjct: 72 ELSKLTNLSIASNFITEEGARSISKLKQLTILDLNDNRIACKGAQYLGELSQLKKLNLLA 131
Query: 262 NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS 321
N I D+ + L NL LNL I +EG+ ++ L L L +S ++ + + +S
Sbjct: 132 NYIQDKGAKSVSQLENLTELNLTRNSIQNEGIKSIIELPLLTKLNISQNRISNEEAQLIS 191
Query: 322 GLTNLESINLSFTGISDGSLRKL 344
G+ L+ + + T I + +KL
Sbjct: 192 GMKQLKELVATHTQIDNEGAKKL 214
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+ L L I +++ D+G + L LT LN+ ++ +S+ L L LN+N
Sbjct: 1 MNRLTKLSIGFNRLHDAGAEIIGQLTTLTELNVAENFLSHEGAESICKLTQLTVLNINFN 60
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
+ D G ++ L L++ N IT+E + L L L+L+ I +G L
Sbjct: 61 GIGDLGAAYIGELSKLTNLSIASNFITEEGARSISKLKQLTILDLNDNRIACKGAQYLGE 120
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L LK L L + G + +S L NL +NL+ I + ++ + L L LN+
Sbjct: 121 LSQLKKLNLLANYIQDKGAKSVSQLENLTELNLTRNSIQNEGIKSIIELPLLTKLNISQN 180
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
+I++ ++ + L L +I + GA L +
Sbjct: 181 RISNEEAQLISGMKQLKELVATHTQIDNEGAKKLHEME 218
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 111/229 (48%), Gaps = 6/229 (2%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI 92
L L +G + ++D ++I Q ++L ++++ + ++ G + + L L+ NF
Sbjct: 4 LTKLSIG-FNRLHDAGAEIIG-QLTTLTELNVAENFLSHEGAESICKLTQLTVLNINFN- 60
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
I D G ++ LS LT+LS +N IT +G ++ + L L LDL G L
Sbjct: 61 GIGDLGAAYIGELSKLTNLSIA-SNFITEEGARSISKLKQLTILDLNDNRIACKGAQYLG 119
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
L +L+ LN+ N I D K +S L NL L ++ + + + GI + L LT LN+
Sbjct: 120 ELSQLKKLNL-LANYIQDKGAKSVSQLENLTELNLTRNSIQNEGIKSIIELPLLTKLNIS 178
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF 261
++ +S + L L Q+ ++G +K ++ L +L+L +
Sbjct: 179 QNRISNEEAQLISGMKQLKELVATHTQIDNEGAKKLHEM-ELDILDLSY 226
>gi|449269519|gb|EMC80282.1| F-box/LRR-repeat protein 14, partial [Columba livia]
Length = 344
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 174/344 (50%), Gaps = 36/344 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM ++ L+L C + G + + L S
Sbjct: 1 RGIRRVQILSLRRSLSYVIQGMA------DIESLNLSGCYNLTDNGLGHAFVAEISSLRS 54
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 55 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 112
Query: 215 PVTA-------ACLDSLSALG--SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A + +A G L L L CQ LSD + ++ +G L+ LNL F
Sbjct: 113 RHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLSDLSLKHLARGLGRLRQLNLSFCG 172
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRH 319
I+D L+HL +++L SLNL SC I D G+++L G L L++S +VG L +
Sbjct: 173 GISDAGLLHLSHMSSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAY 232
Query: 320 LS-GLTNLESINLSFTGISD-GSLRKLAGLSSLKSLNL-DARQITDTGLAALTS-LTGLT 375
++ GL L S++L ISD G R + + L++LN+ +ITD GL + L+ LT
Sbjct: 233 IAQGLDGLRSLSLCSCHISDEGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLT 292
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS 418
+DL+G RIT G + L+ L + +T++ G+V+
Sbjct: 293 GIDLYGCTRITKRGLERITQLPCLKVLNLGLWEMTESEKLGIVT 336
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 167/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ ++++SL+ + C ++D GL H + +S+L SL+ IT + A + L
Sbjct: 19 IQGMADIESLNLSGCYNLTDNGLGHAFVAEISSLRSLNLSLCKQITDSSLGRIAQYLKGL 78
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 79 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 138
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K++D + +L +GL +L LNL C ++ A L LS + SL LNL C
Sbjct: 139 QLTLQDCQKLSDLSLKHLARGLGRLRQLNLSFCGGISDAGLLHLSHMSSLRSLNLRSCDN 198
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L SL+L SC I DEG+
Sbjct: 199 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLRSLSLCSCHISDEGINR 257
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 258 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYG--CTRITKRGLERITQLP 314
Query: 349 SLKSLNLDARQITDT 363
LK LNL ++T++
Sbjct: 315 CLKVLNLGLWEMTES 329
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 135/250 (54%), Gaps = 31/250 (12%)
Query: 239 QLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHLK-GLTNLESLNLDSC-GIGDEGLV 294
Q++D + ++ + L+VL LG + IT+ L+ + GL L+SLNL SC + D G+
Sbjct: 62 QITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIG 121
Query: 295 NLTGLCN--------LKCLELSDTQVGSS-GLRHLS-GLTNLESINLSFTG-ISDGSLRK 343
+L G+ L+ L L D Q S L+HL+ GL L +NLSF G ISD L
Sbjct: 122 HLAGMTRSAAEGCLGLEQLTLQDCQKLSDLSLKHLARGLGRLRQLNLSFCGGISDAGLLH 181
Query: 344 LAGLSSLKSLNLDA-RQITDTGLA--ALTSLTGLTHLDL-FGARITDSGAAYL-RNFKNL 398
L+ +SSL+SLNL + I+DTG+ A+ SL L+ LD+ F ++ D AY+ + L
Sbjct: 182 LSHMSSLRSLNLRSCDNISDTGIMHLAMGSLR-LSGLDVSFCDKVGDQSLAYIAQGLDGL 240
Query: 399 RSLEICGGGLTDAGLT-------GLVSLNVSNS-RITSAGLRHL-KPLKNLRSLTLESC- 448
RSL +C ++D G+ GL +LN+ RIT GL + + L L + L C
Sbjct: 241 RSLSLCSCHISDEGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT 300
Query: 449 KVTANDIKRL 458
++T ++R+
Sbjct: 301 RITKRGLERI 310
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 49/201 (24%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAF 127
++D+GL+HL S+L+SL+ C ISD G+ HL G L+ L + + Q +
Sbjct: 174 ISDAGLLHLSHMSSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYI 233
Query: 128 AGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
A +GL L SL++ C+ + + + + L++L I
Sbjct: 234 A-----------------------QGLDGLRSLSLCSCHISDEGINRMVRQMHGLRTLNI 270
Query: 188 -SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGC 245
C ++TD G+ + + L +LT ++L GC +++ G
Sbjct: 271 GQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITKRGL 307
Query: 246 EKFSKIGSLKVLNLGFNEITD 266
E+ +++ LKVLNLG E+T+
Sbjct: 308 ERITQLPCLKVLNLGLWEMTE 328
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 49/202 (24%)
Query: 272 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 322
++G+ ++ESLNL C G+G + ++ L +L C +++D+ +G ++L G
Sbjct: 19 IQGMADIESLNLSGCYNLTDNGLGHAFVAEISSLRSLNLSLCKQITDSSLGRIA-QYLKG 77
Query: 323 LTNLE---SINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLT------ 372
L LE N++ TG+ L GL LKSLNL + R ++D G+ L +T
Sbjct: 78 LEVLELGGCSNITNTGL----LLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEG 133
Query: 373 --GLTHLDLFG-ARITDSGAAYL-RNFKNLRSLEI--CGGGLTDAGLTGLVSLNVSNSRI 426
GL L L +++D +L R LR L + CGG I
Sbjct: 134 CLGLEQLTLQDCQKLSDLSLKHLARGLGRLRQLNLSFCGG-------------------I 174
Query: 427 TSAGLRHLKPLKNLRSLTLESC 448
+ AGL HL + +LRSL L SC
Sbjct: 175 SDAGLLHLSHMSSLRSLNLRSC 196
>gi|320169490|gb|EFW46389.1| hypothetical protein CAOG_04357 [Capsaspora owczarzaki ATCC 30864]
Length = 620
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 129/296 (43%), Gaps = 5/296 (1%)
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINL--VKLDLERCTRIHGGLVNLKGLMKLESLN 161
G+ T + NN I + AF+GL L + LD + T I L LE L
Sbjct: 54 GIPVTTRALYLSNNQIASIPAYAFSGLTALTWLYLDSNQITSISASA--FSDLTSLEQLR 111
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 221
++ N IT +GLT + L ++ +++T GL L L L +T+
Sbjct: 112 MEE-NQITSISDGAFTGLTAVLELGLNRNQITSISANAFTGLTGLHFLELSNNQLTSIPS 170
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
+++ +L L L + +++ F+ + +LK L L N IT +GL+ L L
Sbjct: 171 SVFASVTTLLDLLLYKNRITSIPTSAFTTLTALKTLRLYDNPITSISANAFEGLSALTVL 230
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 341
+L S I + TGL L+ L L Q+ + +GLT ++++ L I+ S
Sbjct: 231 HLSSNHITSILPSSFTGLTALEALLLDKNQISNIPASAFTGLTAMQTLYLDSNRITSIST 290
Query: 342 RKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
GL++L + LD+ QIT A T LT LT+L L G T + N
Sbjct: 291 NAFTGLTALTYMYLDSNQITRIPANAFTGLTALTYLTLDGNPFTTLPPGLFKGLPN 346
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 102/240 (42%), Gaps = 16/240 (6%)
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
+ S L +L +L L+ Q++ FS + SL+ L + N+IT GLT + L
Sbjct: 76 AFSGLTALTWLYLDSNQITSISASAFSDLTSLEQLRMEENQITSISDGAFTGLTAVLELG 135
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
L+ I TGL L LELS+ Q+ S + +T L + L I+
Sbjct: 136 LNRNQITSISANAFTGLTGLHFLELSNNQLTSIPSSVFASVTTLLDLLLYKNRITSIPTS 195
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
L++LK+L L IT A L+ LT L L IT + +F L +LE
Sbjct: 196 AFTTLTALKTLRLYDNPITSISANAFEGLSALTVLHLSSNHIT---SILPSSFTGLTALE 252
Query: 403 -----------ICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
I T GLT + +L + ++RITS L L + L+S ++T
Sbjct: 253 ALLLDKNQISNIPASAFT--GLTAMQTLYLDSNRITSISTNAFTGLTALTYMYLDSNQIT 310
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 6/226 (2%)
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L L+ Q++ FS + +L L L N+IT LT+LE L ++ I
Sbjct: 62 LYLSNNQIASIPAYAFSGLTALTWLYLDSNQITSISASAFSDLTSLEQLRMEENQITSIS 121
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
TGL + L L+ Q+ S +GLT L + LS ++ A +++L
Sbjct: 122 DGAFTGLTAVLELGLNRNQITSISANAFTGLTGLHFLELSNNQLTSIPSSVFASVTTLLD 181
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD-- 410
L L +IT +A T+LT L L L+ IT A L L + +T
Sbjct: 182 LLLYKNRITSIPTSAFTTLTALKTLRLYDNPITSISANAFEGLSALTVLHLSSNHITSIL 241
Query: 411 ----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
GLT L +L + ++I++ L +++L L+S ++T+
Sbjct: 242 PSSFTGLTALEALLLDKNQISNIPASAFTGLTAMQTLYLDSNRITS 287
>gi|356506506|ref|XP_003522022.1| PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max]
Length = 669
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 196/440 (44%), Gaps = 76/440 (17%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDS------GLIHLKD------- 79
L+ LCL G+ D +D++A + L ++DLS +T+ L HL+D
Sbjct: 182 LRLLCLKWCVGIGDLGVDLVAIKCKELTTLDLSYLPITEKCLPSIFKLQHLEDLVLEGCF 241
Query: 80 ---------------CSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
C L+ LD + C IS H+ GLS LTS+S I A G
Sbjct: 242 GIDDDSLDVDLLKQGCKTLKRLDISGCQNIS-----HV-GLSKLTSISGGLEKLILADGS 295
Query: 125 KAFAGLIN-LVKLDLERCTRIHGGLVNLKGL-------MKLESLNIKWCNCITDSDMKPL 176
L + L KL + + + G V +GL + L L++ C +TD + L
Sbjct: 296 PVTLSLADGLNKLSMLQSIVLDGCPVTSEGLRAIGNLCISLRELSLSKCLGVTDEALSFL 355
Query: 177 -SGLTNLKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
S +L+ L I+ C K+TD IA + LT L +E C + + F L
Sbjct: 356 VSKHKDLRKLDITCCRKITDVSIASIANSCTGLTSLKMESCTLVPS---------EAFVL 406
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEG 292
+C L+ L+L NEI DE L+ + + L SL + C I D G
Sbjct: 407 IGQKCHY-------------LEELDLTDNEIDDEGLMSISSCSWLTSLKIGICLNITDRG 453
Query: 293 LVNLTGLCN-LKCLEL-SDTQVGSSGLRHLS-GLTNLESINLSF-TGISDGSLRKLAGLS 348
L + C+ LK L+L T V G+ ++ G LE IN S+ T I+D +L L+ S
Sbjct: 454 LAYVGMRCSKLKELDLYRSTGVDDLGISAIAGGCPGLEMINTSYCTSITDRALIALSKCS 513
Query: 349 SLKSLNLDA-RQITDTGLAALT-SLTGLTHLDLFGAR-ITDSGAAYLRNF-KNLRSLEIC 404
+L++L + +T GLAA+ + L+ LD+ I DSG L +F +NLR + +
Sbjct: 514 NLETLEIRGCLLVTSIGLAAIAMNCRQLSRLDIKKCYNIDDSGMIALAHFSQNLRQINLS 573
Query: 405 GGGLTDAGLTGLVSLNVSNS 424
+TD GL L +++ S
Sbjct: 574 YSSVTDVGLLSLANISCLQS 593
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 33/196 (16%)
Query: 51 VIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLT 109
+I + L +DL+ +++ D GL+ + CS L SL C+ I+D GL ++ S L
Sbjct: 406 LIGQKCHYLEELDLTDNEIDDEGLMSISSCSWLTSLKIGICLNITDRGLAYVGMRCSKLK 465
Query: 110 SLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWC-- 165
L R+ + G+ A A G L ++ CT I L+ L LE+L I+ C
Sbjct: 466 ELDLYRSTGVDDLGISAIAGGCPGLEMINTSYCTSITDRALIALSKCSNLETLEIRGCLL 525
Query: 166 -----------NC-------------ITDSDMKPLSGLT-NLKSLQISCSKVTDSG---I 197
NC I DS M L+ + NL+ + +S S VTD G +
Sbjct: 526 VTSIGLAAIAMNCRQLSRLDIKKCYNIDDSGMIALAHFSQNLRQINLSYSSVTDVGLLSL 585
Query: 198 AYLKGLQKLTLLNLEG 213
A + LQ TLL+L+G
Sbjct: 586 ANISCLQSFTLLHLQG 601
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 155/363 (42%), Gaps = 84/363 (23%)
Query: 117 NAITAQGMKAFAG-LINLVKLDLERCTRIHGGLVNL----------------------KG 153
+ A+ + A A N+ +LDL C R+ G + L G
Sbjct: 61 RPLRAEHLPALAARYPNVTELDLSLCPRVGDGALGLVAGAYAATLRRMDLSRSRRFTATG 120
Query: 154 LMKLES-------LNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLK-GLQ 204
L+ L + L++ + D+ + ++ NL+ L ++ C VTD GI + G +
Sbjct: 121 LLSLGARCEHLVELDLSNATELRDAGVAAVARARNLRKLWLARCKMVTDMGIGCIAVGCR 180
Query: 205 KLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS-KIGSLKVLNLGFNE 263
KL LL L+ C + D G + + K L L+L +
Sbjct: 181 KLRLLCLKWC-----------------------VGIGDLGVDLVAIKCKELTTLDLSYLP 217
Query: 264 ITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT---GLCNLKCLELSDTQVGSSGLRH 319
IT++CL + L +LE L L+ C GI D+ L G LK L++S G + H
Sbjct: 218 ITEKCLPSIFKLQHLEDLVLEGCFGIDDDSLDVDLLKQGCKTLKRLDIS----GCQNISH 273
Query: 320 LSGLTNLESIN--LSFTGISDGSLRKLA------GLSSLKSLNLDARQITDTGLAALTSL 371
+ GL+ L SI+ L ++DGS L+ LS L+S+ LD +T GL A+ +L
Sbjct: 274 V-GLSKLTSISGGLEKLILADGSPVTLSLADGLNKLSMLQSIVLDGCPVTSEGLRAIGNL 332
Query: 372 -TGLTHLDLFGAR-ITDSGAAYL-RNFKNLRSLEI-CGGGLTDAGL-------TGLVSLN 420
L L L +TD ++L K+LR L+I C +TD + TGL SL
Sbjct: 333 CISLRELSLSKCLGVTDEALSFLVSKHKDLRKLDITCCRKITDVSIASIANSCTGLTSLK 392
Query: 421 VSN 423
+ +
Sbjct: 393 MES 395
>gi|406832962|ref|ZP_11092556.1| hypothetical protein SpalD1_15024 [Schlesneria paludicola DSM
18645]
Length = 236
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 2/163 (1%)
Query: 269 LVHL-KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
+HL KGL L SL+L IGD L + L NL L LS+ + +GL L L
Sbjct: 64 FLHLVKGLDQLTSLDLRKTDIGDTHLKEIAELENLTTLRLSNVPITDAGLIELRSQKKLS 123
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDS 387
+++L+ T I+D L++L+ SL+ L+L IT GL L+ L L L+L ++ D+
Sbjct: 124 TLDLAGTRITDDGLKELSVHHSLRYLDLSETTITGMGLKDLSGLPNLLSLNLENTKVNDT 183
Query: 388 GAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAG 430
G + FK+L + + +TDAG S+++ N+RI +G
Sbjct: 184 GLECVHEFKHLIRINLRRTSVTDAGQKAF-SVSMPNTRIYDSG 225
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 74/138 (53%), Gaps = 6/138 (4%)
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
+ GL L S++L T I D L+++A L +L +L L ITD GL L S L+ LDL
Sbjct: 68 VKGLDQLTSLDLRKTDIGDTHLKEIAELENLTTLRLSNVPITDAGLIELRSQKKLSTLDL 127
Query: 380 FGARITDSGAAYLRNFKNLRSLE-----ICGGGLTD-AGLTGLVSLNVSNSRITSAGLRH 433
G RITD G L +LR L+ I G GL D +GL L+SLN+ N+++ GL
Sbjct: 128 AGTRITDDGLKELSVHHSLRYLDLSETTITGMGLKDLSGLPNLLSLNLENTKVNDTGLEC 187
Query: 434 LKPLKNLRSLTLESCKVT 451
+ K+L + L VT
Sbjct: 188 VHEFKHLIRINLRRTSVT 205
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 211 LEGCPVTAAC-----------LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
L G PV + L + L L L+L + + D ++ +++ +L L L
Sbjct: 44 LPGTPVVSVSFYGSSRFNGKFLHLVKGLDQLTSLDLRKTDIGDTHLKEIAELENLTTLRL 103
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
ITD L+ L+ L +L+L I D+GL L+ +L+ L+LS+T + GL+
Sbjct: 104 SNVPITDAGLIELRSQKKLSTLDLAGTRITDDGLKELSVHHSLRYLDLSETTITGMGLKD 163
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
LSGL NL S+NL T ++D L + L +NL +TD G A + + +
Sbjct: 164 LSGLPNLLSLNLENTKVNDTGLECVHEFKHLIRINLRRTSVTDAGQKAFS-------VSM 216
Query: 380 FGARITDSGA 389
RI DSG+
Sbjct: 217 PNTRIYDSGS 226
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 96 DGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGL 154
+G HL +GL LTSL R+ + I +K A L NL L L GL+ L+
Sbjct: 61 NGKFLHLVKGLDQLTSLDLRKTD-IGDTHLKEIAELENLTTLRLSNVPITDAGLIELRSQ 119
Query: 155 MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC 214
KL +L++ ITD +K LS +L+ L +S + +T G+ L GL L LNLE
Sbjct: 120 KKLSTLDLAGTR-ITDDGLKELSVHHSLRYLDLSETTITGMGLKDLSGLPNLLSLNLENT 178
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS------KI---GSLKVLNLGFNE 263
V L+ + L +NL R ++D G + FS +I GS N+G N
Sbjct: 179 KVNDTGLECVHEFKHLIRINLRRTSVTDAGQKAFSVSMPNTRIYDSGSGPAFNVGMNR 236
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 26/182 (14%)
Query: 141 CTRIHGGLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY 199
+R +G ++L KGL +L SL+++ + I D+ +K ++ L NL +L++S +TD+G+
Sbjct: 57 SSRFNGKFLHLVKGLDQLTSLDLRKTD-IGDTHLKEIAELENLTTLRLSNVPITDAGLIE 115
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
L+ +KL+ L+L G +T DDG ++ S SL+ L+L
Sbjct: 116 LRSQKKLSTLDLAGTRIT------------------------DDGLKELSVHHSLRYLDL 151
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
IT L L GL NL SLNL++ + D GL + +L + L T V +G +
Sbjct: 152 SETTITGMGLKDLSGLPNLLSLNLENTKVNDTGLECVHEFKHLIRINLRRTSVTDAGQKA 211
Query: 320 LS 321
S
Sbjct: 212 FS 213
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 66/144 (45%), Gaps = 23/144 (15%)
Query: 329 INLSFTGIS--DGSLRKLA-GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
+++SF G S +G L GL L SL+L I DT L + L LT L L IT
Sbjct: 50 VSVSFYGSSRFNGKFLHLVKGLDQLTSLDLRKTDIGDTHLKEIAELENLTTLRLSNVPIT 109
Query: 386 DSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
D+G LR+ K L +L++ G +RIT GL+ L +LR L L
Sbjct: 110 DAGLIELRSQKKLSTLDLAG------------------TRITDDGLKELSVHHSLRYLDL 151
Query: 446 ESCKVTANDIKRLQSRDLPNLVSF 469
+T +K L LPNL+S
Sbjct: 152 SETTITGMGLKDLSG--LPNLLSL 173
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+L ++ LS +TD+GLI L+ L +LD +I+D GL+ L +L L
Sbjct: 96 ENLTTLRLSNVPITDAGLIELRSQKKLSTLDLA-GTRITDDGLKELSVHHSLRYLDL-SE 153
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
IT G+K +GL NL+ L+LE GL + L +N++ +TD+ K
Sbjct: 154 TTITGMGLKDLSGLPNLLSLNLENTKVNDTGLECVHEFKHLIRINLRRT-SVTDAGQKAF 212
Query: 177 SGLTNLKSLQISCSKVTDSG 196
S+ + +++ DSG
Sbjct: 213 -------SVSMPNTRIYDSG 225
>gi|407424780|gb|EKF39143.1| hypothetical protein MOQ_000636 [Trypanosoma cruzi marinkellei]
Length = 936
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 181/403 (44%), Gaps = 24/403 (5%)
Query: 8 QQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGS 67
QQ+ + + TEV + A R+ L LG P K V LS+ +S S
Sbjct: 310 QQVSDVTPFLPHCTEVRVLALRNTHLTSEKLGLLP---QKCRHV------EQLSLCMSSS 360
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEH-LRGLSNLTSLSFRRNNAITAQGMKA 126
L H C+ L+ LD ++ Q+++ G+ + L L+ LS I +G++
Sbjct: 361 VSCTRFLRHRSLCA-LRDLDLSY-TQVTEEGMHRDVSRLKKLSRLSLEGCRKI--EGLQW 416
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGL--TNLKS 184
L L +LDL + L L+ +L L+++WC IT +K L G +L+
Sbjct: 417 LRALTQLRELDLGYSSVTDDSLTALRFCPELVRLDLQWCGRIT--SLKCLVGALCDSLRE 474
Query: 185 LQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
L ++ + VTD G+ LK L ++LEGC + ++ L L L +++ R ++++ G
Sbjct: 475 LNLTETSVTDEGLVPLKDFAALEWISLEGCGAVSD-VNVLCNLTRLREVDVGRTRVTNGG 533
Query: 245 CEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
S+ +L+ + + +TD L L LE ++L C + +EG+ L G +L+
Sbjct: 534 VLSLSQCQALRAMRMRQCYRLTDASF--LGALQQLEEVDLSDCPVTNEGIAALCGARSLR 591
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD- 362
L+L S + L GL +L ++L T + + LA L +L + + +
Sbjct: 592 KLQLQSCH-AVSDVNFLGGLEHLMLLDLHHTTVDEAGSVGLAQCPQLTTLIMHSVLVHSL 650
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
A L L LDL ++T ++LR L +L + G
Sbjct: 651 QHWNAALFLPRLKRLDLSTTKVTSDALSFLRMCPILETLSLRG 693
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 178/435 (40%), Gaps = 80/435 (18%)
Query: 47 KWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC--------------- 91
+W+ + + L +DL S VTD L L+ C L LD +C
Sbjct: 415 QWLRAL----TQLRELDLGYSSVTDDSLTALRFCPELVRLDLQWCGRITSLKCLVGALCD 470
Query: 92 ---------IQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT 142
++D GL L+ + L +S A++ + L L ++D+ R
Sbjct: 471 SLRELNLTETSVTDEGLVPLKDFAALEWISLEGCGAVS--DVNVLCNLTRLREVDVGRTR 528
Query: 143 RIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKG 202
+GG+++L L ++ ++ C +TD+ L L L+ + +S VT+ GIA L G
Sbjct: 529 VTNGGVLSLSQCQALRAMRMRQCYRLTDASF--LGALQQLEEVDLSDCPVTNEGIAALCG 586
Query: 203 LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG------CEKFSK------ 250
+ L L L+ C + ++ L L L L+L+ + + G C + +
Sbjct: 587 ARSLRKLQLQSCHAVSD-VNFLGGLEHLMLLDLHHTTVDEAGSVGLAQCPQLTTLIMHSV 645
Query: 251 -------------IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL- 296
+ LK L+L ++T + L L+ LE+L+L C + + +L
Sbjct: 646 LVHSLQHWNAALFLPRLKRLDLSTTKVTSDALSFLRMCPILETLSLRGC----KNITHLD 701
Query: 297 ---------TGLCNLKC--LELSDTQVGSSGLRHLS---GLTNLESINLSFTGISDGSLR 342
G+C + E DT V + + G + +E++ ++ I +
Sbjct: 702 FLIIQTSSGVGVCGIAPHDAEPHDTLVDIIAGKEKNPDDGPSPIENMTINDGAIKSTAAA 761
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSL 401
+ G L+ L L +T+ GL AL GL L L + +T+ A LR L+ L
Sbjct: 762 PVVGRHRLRELTLSDTGVTNDGLRALQYCPGLERLRLAHCKNVTE--VAVLRWLSQLKEL 819
Query: 402 EICGGGLTDAGLTGL 416
++ G+T +GL L
Sbjct: 820 DLSATGVTGSGLANL 834
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 199/449 (44%), Gaps = 49/449 (10%)
Query: 31 CALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNF 90
CAL+DL L Y V ++ M S+ L + L G + GL L+ + L+ LD +
Sbjct: 373 CALRDLDLS-YTQVTEEGMHRDVSRLKKLSRLSLEGCRKIE-GLQWLRALTQLRELDLGY 430
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLI--NLVKLDLERCTRIHGGL 148
++D L LR L L + IT+ +K G + +L +L+L + GL
Sbjct: 431 S-SVTDDSLTALRFCPELVRLDLQWCGRITS--LKCLVGALCDSLRELNLTETSVTDEGL 487
Query: 149 VNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTL 208
V LK LE ++++ C ++D ++ L LT L+ + + ++VT+ G+ L Q L
Sbjct: 488 VPLKDFAALEWISLEGCGAVSDVNV--LCNLTRLREVDVGRTRVTNGGVLSLSQCQALRA 545
Query: 209 LNLEGC-PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL-GFNEITD 266
+ + C +T A L AL L ++L+ C ++++G SL+ L L + ++D
Sbjct: 546 MRMRQCYRLTDASF--LGALQQLEEVDLSDCPVTNEGIAALCGARSLRKLQLQSCHAVSD 603
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG---L 323
+ L GL +L L+L + + G V L L L + V S L+H + L
Sbjct: 604 --VNFLGGLEHLMLLDLHHTTVDEAGSVGLAQCPQLTTLIMHSVLVHS--LQHWNAALFL 659
Query: 324 TNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGL-------- 374
L+ ++LS T ++ +L L L++L+L + IT + + +G+
Sbjct: 660 PRLKRLDLSTTKVTSDALSFLRMCPILETLSLRGCKNITHLDFLIIQTSSGVGVCGIAPH 719
Query: 375 ------THLDLFGARI--TDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLV------SLN 420
T +D+ + D G + + N + I G + +V L
Sbjct: 720 DAEPHDTLVDIIAGKEKNPDDGPSPIEN------MTINDGAIKSTAAAPVVGRHRLRELT 773
Query: 421 VSNSRITSAGLRHLKPLKNLRSLTLESCK 449
+S++ +T+ GLR L+ L L L CK
Sbjct: 774 LSDTGVTNDGLRALQYCPGLERLRLAHCK 802
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 148/351 (42%), Gaps = 60/351 (17%)
Query: 141 CTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAY 199
CTR + + L L L++ + + + +S L L L + C K+ G+ +
Sbjct: 363 CTR----FLRHRSLCALRDLDLSYTQVTEEGMHRDVSRLKKLSRLSLEGCRKI--EGLQW 416
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLN 258
L+ L +L L+L VT L +L L L+L C +++ C + SL+ LN
Sbjct: 417 LRALTQLRELDLGYSSVTDDSLTALRFCPELVRLDLQWCGRITSLKCLVGALCDSLRELN 476
Query: 259 LGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSD---TQVGSS 315
L +TDE LV LK LE ++L+ CG + ++ LCNL L D T+V +
Sbjct: 477 LTETSVTDEGLVPLKDFAALEWISLEGCG----AVSDVNVLCNLTRLREVDVGRTRVTNG 532
Query: 316 GLRHLS-----------------------GLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
G+ LS L LE ++LS +++ + L G SL+
Sbjct: 533 GVLSLSQCQALRAMRMRQCYRLTDASFLGALQQLEEVDLSDCPVTNEGIAALCGARSLRK 592
Query: 353 LNLDA-RQITDTGLAALTSLTGLTH---LDLFGARITDSGAAYLRNFKNL---------- 398
L L + ++D L GL H LDL + ++G+ L L
Sbjct: 593 LQLQSCHAVSDVNF-----LGGLEHLMLLDLHHTTVDEAGSVGLAQCPQLTTLIMHSVLV 647
Query: 399 RSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
SL+ L L L L++S +++TS L L+ L +L+L CK
Sbjct: 648 HSLQHWNAALF---LPRLKRLDLSTTKVTSDALSFLRMCPILETLSLRGCK 695
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 148/353 (41%), Gaps = 40/353 (11%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+ L VD+ + VT+ G++ L C L+++ C +++D L L L + +
Sbjct: 517 TRLREVDVGRTRVTNGGVLSLSQCQALRAMRMRQCYRLTDASF--LGALQQLEEVDLS-D 573
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIH-----GGLVNLK---------------GLMK 156
+T +G+ A G +L KL L+ C + GGL +L GL +
Sbjct: 574 CPVTNEGIAALCGARSLRKLQLQSCHAVSDVNFLGGLEHLMLLDLHHTTVDEAGSVGLAQ 633
Query: 157 LESLNIKWCNCITDSDMKPLSG---LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
L + + ++ + L LK L +S +KVT +++L+ L L+L G
Sbjct: 634 CPQLTTLIMHSVLVHSLQHWNAALFLPRLKRLDLSTTKVTSDALSFLRMCPILETLSLRG 693
Query: 214 CP----VTAACLDSLSALGSLFYLNLNRCQLSDD------GCEKFSKIGSLKVLNLGFNE 263
C + + + S +G + + + + D G EK G + N+ N+
Sbjct: 694 CKNITHLDFLIIQTSSGVG-VCGIAPHDAEPHDTLVDIIAGKEKNPDDGPSPIENMTIND 752
Query: 264 --ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS 321
I + G L L L G+ ++GL L L+ L L+ + + + L
Sbjct: 753 GAIKSTAAAPVVGRHRLRELTLSDTGVTNDGLRALQYCPGLERLRLAHCK-NVTEVAVLR 811
Query: 322 GLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 374
L+ L+ ++LS TG++ L L+ +L + R+ + G + ++TG+
Sbjct: 812 WLSQLKELDLSATGVTGSGLANLSPSGNLPVRCMREREWKEEGGVSGDNMTGV 864
>gi|406830657|ref|ZP_11090251.1| hypothetical protein SpalD1_03434 [Schlesneria paludicola DSM
18645]
Length = 254
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 93/174 (53%)
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
L+ L L +L+++ +++ G + K+ SL L L ++I+D L L+ L NL
Sbjct: 65 YLNLLKPFRDLTWLDVSGTTITNAGMPEIGKLTSLTALYLSKSQISDAGLSELRSLKNLT 124
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
+L++ GI +EG+ ++ L L+ L L T + GL L LT+L +NL + ++D
Sbjct: 125 TLHIVGNGISNEGMRSIGELDELRILHLGRTTITEEGLHELKKLTHLSDLNLIHSNLNDD 184
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
+ L+ L+SL +L+L +I+D GLA+ L LT L + T +G L+
Sbjct: 185 AANVLSELTSLTTLHLGRNEISDVGLASFNKLNNLTILTYQRNKTTLAGEEALK 238
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
+D+SG+ +T++G+ + ++L +L + QISD GL LR L NLT+L N I+
Sbjct: 78 LDVSGTTITNAGMPEIGKLTSLTALYLSKS-QISDAGLSELRSLKNLTTLHIV-GNGISN 135
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
+GM++ L L L L R T GL LK L L LN+ N + D LS LT+
Sbjct: 136 EGMRSIGELDELRILHLGRTTITEEGLHELKKLTHLSDLNLIHSN-LNDDAANVLSELTS 194
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
L +L + ++++D G+A L LT+L + T A ++L
Sbjct: 195 LTTLHLGRNEISDVGLASFNKLNNLTILTYQRNKTTLAGEEAL 237
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 149 VNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTL 208
VN KG K N K+ N +KP LT L +S + +T++G+ + L LT
Sbjct: 53 VNFKGNKKF---NYKYLNL-----LKPFRDLT---WLDVSGTTITNAGMPEIGKLTSLTA 101
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
L L ++ A L L +L +L L++ +S++G ++ L++L+LG IT+E
Sbjct: 102 LYLSKSQISDAGLSELRSLKNLTTLHIVGNGISNEGMRSIGELDELRILHLGRTTITEEG 161
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
L LK LT+L LNL + D+ L+ L +L L L ++ GL + L NL
Sbjct: 162 LHELKKLTHLSDLNLIHSNLNDDAANVLSELTSLTTLHLGRNEISDVGLASFNKLNNL 219
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 19/196 (9%)
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
LK +L L++ I + G+ + L +L L LS +Q+ +GL L L NL ++++
Sbjct: 69 LKPFRDLTWLDVSGTTITNAGMPEIGKLTSLTALYLSKSQISDAGLSELRSLKNLTTLHI 128
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
GIS+ +R + L L+ L+L IT+ GL L LT L+ L+L + + D A
Sbjct: 129 VGNGISNEGMRSIGELDELRILHLGRTTITEEGLHELKKLTHLSDLNLIHSNLNDDAANV 188
Query: 392 LRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
L + LT L +L++ + I+ GL L NL LT + K T
Sbjct: 189 L------------------SELTSLTTLHLGRNEISDVGLASFNKLNNLTILTYQRNKTT 230
Query: 452 ANDIKRLQSRDLPNLV 467
+ L+ + LPNL+
Sbjct: 231 LAGEEALK-QALPNLM 245
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 1/168 (0%)
Query: 111 LSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITD 170
++F+ N + + +L LD+ T + G+ + L L +L + I+D
Sbjct: 53 VNFKGNKKFNYKYLNLLKPFRDLTWLDVSGTTITNAGMPEIGKLTSLTALYLSKSQ-ISD 111
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
+ + L L NL +L I + +++ G+ + L +L +L+L +T L L L L
Sbjct: 112 AGLSELRSLKNLTTLHIVGNGISNEGMRSIGELDELRILHLGRTTITEEGLHELKKLTHL 171
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
LNL L+DD S++ SL L+LG NEI+D L L NL
Sbjct: 172 SDLNLIHSNLNDDAANVLSELTSLTTLHLGRNEISDVGLASFNKLNNL 219
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
IT GM L +L L L + GL L+ L L +L+I N I++ M+ +
Sbjct: 85 ITNAGMPEIGKLTSLTALYLSKSQISDAGLSELRSLKNLTTLHI-VGNGISNEGMRSIGE 143
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
L L+ L + + +T+ G+ LK L L+ LNL + + LS L SL L+L R
Sbjct: 144 LDELRILHLGRTTITEEGLHELKKLTHLSDLNLIHSNLNDDAANVLSELTSLTTLHLGRN 203
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEIT 265
++SD G F+K+ +L +L N+ T
Sbjct: 204 EISDVGLASFNKLNNLTILTYQRNKTT 230
>gi|413936142|gb|AFW70693.1| F-box family member [Zea mays]
Length = 643
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 142/483 (29%), Positives = 209/483 (43%), Gaps = 103/483 (21%)
Query: 49 MDVIASQGSSLLSVDLSGSD----VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGL-EHL 102
M V+A L + + GS VTD GL + + NL SL I+D GL E
Sbjct: 154 MAVVAGSCGGLEKLSVRGSHPARGVTDQGLSAVARGSPNLSSLALWDVPLITDAGLVEIA 213
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRI-HGGLVNL-KGLMKLES 159
G L L R IT +G+ AFA G +LV L +E C+ + GL + + MKL++
Sbjct: 214 AGCPLLERLDISRCPLITDKGLAAFAQGCPDLVSLTIEACSSVGDEGLRAIGRSCMKLQA 273
Query: 160 LNIKWCNCITDSDMKPL--SGLTNLKSLQISCSKVTDSGIAYL----------------- 200
+NIK C + D + L S +L +++ +TD+ +A +
Sbjct: 274 VNIKNCPLVGDQGISSLVCSATASLAKIRLQGLNITDASLAVIGYYGKAITDLSLTRLAT 333
Query: 201 ------------KGLQKLTLLNLEGCP-VTAACLDSLSAL-GSLFYLNLNRC-QLSDDGC 245
GLQ L +++ CP VT L S++ SL L L +C +SD G
Sbjct: 334 VGERGFWVMANAAGLQNLRCMSVTSCPGVTDLALASIAKFCPSLKKLYLRKCGHVSDAGL 393
Query: 246 EKFSKIGSLKVL-NLGFNEITDECLVHLKGLTN----LESLNLDSC-GIGDEGLVNLTGL 299
+ F++ S KV NL E LV + N +L+L C GI D V
Sbjct: 394 KAFTE--SAKVFENLQLEECNRVTLVGILAFLNCSQKFRALSLVKCMGIKDICSVPQLPF 451
Query: 300 C-NLKCLELSDTQVGSSGLRHLSGL--TNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
C +L+ L + D ++ + G+ LE ++LS G
Sbjct: 452 CRSLRFLTIKDCPGFTNASLAVVGMICPQLEQVDLSGLG--------------------- 490
Query: 357 ARQITDTGLAAL--TSLTGLTHLDLFGAR-ITDSGAAYL--RNFKNLR--SLEICGGGLT 409
++TD GL L +S +GL +DL G + ITD + L R+ K+L+ SLE C +T
Sbjct: 491 --EVTDNGLLPLIQSSESGLIKVDLSGCKNITDVAVSSLVKRHGKSLKKVSLEGC-SKIT 547
Query: 410 DAGL-------TGLVSLNVSNSRITSAGL------RHLKPLKNLRSLTLESC-KVTANDI 455
DA L T L L++SN ++ G+ RHLK LR L+L C KVT +
Sbjct: 548 DASLFTMSESCTELAELDLSNCMVSDYGVAMLASARHLK----LRVLSLSGCSKVTQKSV 603
Query: 456 KRL 458
L
Sbjct: 604 PFL 606
>gi|343423900|emb|CCD18013.1| leucine-rich repeat protein [Trypanosoma vivax Y486]
Length = 648
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 196/385 (50%), Gaps = 38/385 (9%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT-AQGMKAFAGLINLVK 135
L + S+L++LD + C I+D + L S+L +L IT + F+ +L
Sbjct: 131 LSELSSLRTLDLSHCTGITD--VSPLLKFSSLHTLDLSHCTGITDVSPLLMFS---SLRM 185
Query: 136 LDLERCTRIHGGLVNLKGLMKLESL-NIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVT 193
LD+ CT G+ N+ L KL SL + + C +++ PLS L++L++L IS C+ +T
Sbjct: 186 LDISHCT----GITNVSPLSKLSSLRTLYFLYCTGITNVSPLSELSSLRTLDISHCTGIT 241
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGS 253
D ++ L L L +L+L C + + LS + +L L+L+ C D SK+
Sbjct: 242 D--VSPLSELSSLRMLDLSHC-TDISNVSRLSKIIALQKLDLSHCTGVTD-VSPLSKMIG 297
Query: 254 LKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQ 311
L+ L L ITD + L L++L LNL C GI D L+ +L L+LS
Sbjct: 298 LEKLYLSHCTGITD--VPPLSELSSLRMLNLSHCTGITDVS--PLSEFSSLHTLDLSHCT 353
Query: 312 VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALT 369
G + + LS L++L +++LS TGI+D S L+ LSSL +L+L ITD ++ L+
Sbjct: 354 -GITDVSPLSELSSLRTLDLSHCTGITDVS--PLSELSSLCTLDLSHCTGITD--VSPLS 408
Query: 370 SLTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEICG-GGLTDAG----LTGLVSLNVSN 423
L+ L L+L ITD + L +LR+L++ G+TD L+GL L +S+
Sbjct: 409 KLSSLCTLELSHCTGITD--VSPLSELSSLRTLDLSHCTGITDVSPLSELSGLRMLYLSH 466
Query: 424 SRITSAGLRHLKPLKNLRSLTLESC 448
+ + L L +LR L L C
Sbjct: 467 CP-SITDVSPLSELSSLRMLNLSHC 490
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
L + S+L+ L+ + C I+D + L S+L L IT + + L +L L
Sbjct: 476 LSELSSLRMLNLSHCTGITD--VSPLSEFSSLHILGLSHCTGIT--DVSPLSKLSSLHIL 531
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDS 195
L CT I + L ++ E L + C ITD + PLS L++L++L +S C+ +TD
Sbjct: 532 GLSHCTGI-TDVSPLTTIIGFEKLYLSNCTGITD--VSPLSELSSLRTLDLSHCTGITD- 587
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 255
++ L L L L C + LS L SL L+L C D S++ SL
Sbjct: 588 -VSPLSKLSSLRTLYFSHC-TGITDVSPLSELSSLRTLDLLHCTGITD-VSPLSELSSLG 644
Query: 256 VLNL 259
L+
Sbjct: 645 TLDF 648
>gi|343423407|emb|CCD18182.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 518
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 160/378 (42%), Gaps = 62/378 (16%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISD----------------GGLEHLRGLSNLTSLS 112
VTD L L +L L+ C +++D G +RGL L SL
Sbjct: 144 VTDDFLCSLTTSGSLTHLNLTECSRLTDVEPLASIKTLEQVNLSGSFPGVRGLGALGSLP 203
Query: 113 FRR-----NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI---KW 164
R + A+T +K + LV+L L C R L ++ L+K+ SL +
Sbjct: 204 RLRELNLKHTAVTDDCLKTLSASKTLVRLFLGDCRR----LTDVTPLVKISSLQVVDLSD 259
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
C+ IT M L L L ++ + +TD + L Q L L+++ C + L +
Sbjct: 260 CSGITKG-MGGFGTLPGLYLLSLTGTALTDEQLQELCASQSLESLSIKRCKL----LTDV 314
Query: 225 SALG---SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL--------- 272
LG +L L+++ C G FS + L+ L + F +T+ECL +
Sbjct: 315 GVLGFVTTLRELDMSECDGVARGFCSFSALRELRSLYMTFTRVTNECLCEIAKCTQLVKL 374
Query: 273 -----KGLTN---------LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
K LT+ LE LN++ C D+GL L GL L+ L +S T VG+ LR
Sbjct: 375 SVAGCKKLTDISCLAQVHTLEDLNVNMCEHIDDGLGVLGGLEELRTLRMSSTAVGNDELR 434
Query: 319 HLSGLTNLESINLS-FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
+ LE L I+D S LA SL LNLD Q TG+ L L L +
Sbjct: 435 LVCKSKTLERSELEGCERITDVS--ALAAAQSLMFLNLDKCQKVVTGVGELGKLPALRVI 492
Query: 378 DLFGARITDSGAAYLRNF 395
L GA +T+ L+ +
Sbjct: 493 SLQGATVTEDDMKSLKMY 510
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 177/411 (43%), Gaps = 64/411 (15%)
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
G+S+L ++ +AI G F + L L L R L +L L LN+
Sbjct: 107 GMSSLEEVALHNASAIVHIG--RFGRMPCLRVLTLHRVGVTDDFLCSLTTSGSLTHLNLT 164
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
C+ +TD ++PL+ + L+ + +S S G+ L L +L LNL+ VT CL +
Sbjct: 165 ECSRLTD--VEPLASIKTLEQVNLSGSFPGVRGLGALGSLPRLRELNLKHTAVTDDCLKT 222
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL-----------GF----------- 261
LSA +L L L C+ D KI SL+V++L GF
Sbjct: 223 LSASKTLVRLFLGDCRRLTD-VTPLVKISSLQVVDLSDCSGITKGMGGFGTLPGLYLLSL 281
Query: 262 --NEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
+TDE L L +LESL++ C + D G++ + L+ L++S+ + G
Sbjct: 282 TGTALTDEQLQELCASQSLESLSIKRCKLLTDVGVLGF--VTTLRELDMSECDGVARGFC 339
Query: 319 HLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHL 377
S L L S+ ++FT +++ L ++A + L L++ +++TD ++ L + L L
Sbjct: 340 SFSALRELRSLYMTFTRVTNECLCEIAKCTQLVKLSVAGCKKLTD--ISCLAQVHTLEDL 397
Query: 378 DLFGARITDSGAAYLRNFKNLRSLEICGGG-------------------------LTD-- 410
++ D G L + LR+L + +TD
Sbjct: 398 NVNMCEHIDDGLGVLGGLEELRTLRMSSTAVGNDELRLVCKSKTLERSELEGCERITDVS 457
Query: 411 --AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
A L+ LN+ + G+ L L LR ++L+ VT +D+K L+
Sbjct: 458 ALAAAQSLMFLNLDKCQKVVTGVGELGKLPALRVISLQGATVTEDDMKSLK 508
>gi|320164980|gb|EFW41879.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 769
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 115/277 (41%), Gaps = 26/277 (9%)
Query: 109 TSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCI 168
TSLS +N IT+ AF L LV + L+ N I
Sbjct: 45 TSLSLY-DNQITSLPASAFTSLTALVAVYLQD-------------------------NQI 78
Query: 169 TDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG 228
T +G+T LK L ++ +++T GL L L L G +T L++ L
Sbjct: 79 TAVPASAFAGMTTLKQLHLANNQLTSISTGTFAGLTSLVSLYLAGNQITTIPLNAFVDLT 138
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
L L LN Q++D F+ + +K L L N+IT GLT L L L S I
Sbjct: 139 QLVGLELNNNQITDIPASSFTGLSGMKRLTLNNNQITILSANAFTGLTALTELYLSSNTI 198
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
TGL L +EL Q+ S +GL++L + LS I+ S GL+
Sbjct: 199 TSISANAFTGLSALTMVELQFNQITSIASNSFTGLSSLIFLGLSSNRITSISDNAFTGLT 258
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L SL L + QIT +ALT + L L L G T
Sbjct: 259 QLVSLTLFSNQITSISASALTGMPVLLQLTLTGNPFT 295
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 105/246 (42%)
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
+ N IT + LT L ++ + +++T + G+ L L+L +T+ +
Sbjct: 50 YDNQITSLPASAFTSLTALVAVYLQDNQITAVPASAFAGMTTLKQLHLANNQLTSISTGT 109
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
+ L SL L L Q++ F + L L L N+ITD GL+ ++ L L
Sbjct: 110 FAGLTSLVSLYLAGNQITTIPLNAFVDLTQLVGLELNNNQITDIPASSFTGLSGMKRLTL 169
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
++ I TGL L L LS + S +GL+ L + L F I+ +
Sbjct: 170 NNNQITILSANAFTGLTALTELYLSSNTITSISANAFTGLSALTMVELQFNQITSIASNS 229
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
GLSSL L L + +IT A T LT L L LF +IT A+ L L L +
Sbjct: 230 FTGLSSLIFLGLSSNRITSISDNAFTGLTQLVSLTLFSNQITSISASALTGMPVLLQLTL 289
Query: 404 CGGGLT 409
G T
Sbjct: 290 TGNPFT 295
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 113/262 (43%), Gaps = 18/262 (6%)
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
SL + +++T + L L + L+ +TA + + + +L L+L QL+
Sbjct: 46 SLSLYDNQITSLPASAFTSLTALVAVYLQDNQITAVPASAFAGMTTLKQLHLANNQLTSI 105
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
F+ + SL L L N+IT L LT L L L++ I D + TGL +K
Sbjct: 106 STGTFAGLTSLVSLYLAGNQITTIPLNAFVDLTQLVGLELNNNQITDIPASSFTGLSGMK 165
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
L L++ Q+ +GLT L + LS I+ S GLS+L + L QIT
Sbjct: 166 RLTLNNNQITILSANAFTGLTALTELYLSSNTITSISANAFTGLSALTMVELQFNQITSI 225
Query: 364 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN 423
+ T L+ L L L RIT I T GLT LVSL + +
Sbjct: 226 ASNSFTGLSSLIFLGLSSNRIT----------------SISDNAFT--GLTQLVSLTLFS 267
Query: 424 SRITSAGLRHLKPLKNLRSLTL 445
++ITS L + L LTL
Sbjct: 268 NQITSISASALTGMPVLLQLTL 289
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 100/226 (44%), Gaps = 6/226 (2%)
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L+L Q++ F+ + +L + L N+IT G+T L+ L+L + +
Sbjct: 47 LSLYDNQITSLPASAFTSLTALVAVYLQDNQITAVPASAFAGMTTLKQLHLANNQLTSIS 106
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
GL +L L L+ Q+ + L LT L + L+ I+D GLS +K
Sbjct: 107 TGTFAGLTSLVSLYLAGNQITTIPLNAFVDLTQLVGLELNNNQITDIPASSFTGLSGMKR 166
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD-- 410
L L+ QIT A T LT LT L L IT A L +E+ +T
Sbjct: 167 LTLNNNQITILSANAFTGLTALTELYLSSNTITSISANAFTGLSALTMVELQFNQITSIA 226
Query: 411 ----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
GL+ L+ L +S++RITS L L SLTL S ++T+
Sbjct: 227 SNSFTGLSSLIFLGLSSNRITSISDNAFTGLTQLVSLTLFSNQITS 272
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 109/235 (46%), Gaps = 14/235 (5%)
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITD 170
+ ++N ITA AFAG+ L +L L + T I G GL L SL + N IT
Sbjct: 72 YLQDNQITAVPASAFAGMTTLKQLHLANNQLTSISTG--TFAGLTSLVSLYLAG-NQITT 128
Query: 171 SDMKPLSGLTNLKSLQISCSKVTD---SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
+ LT L L+++ +++TD S L G+++LTL N + ++A L+AL
Sbjct: 129 IPLNAFVDLTQLVGLELNNNQITDIPASSFTGLSGMKRLTLNNNQITILSANAFTGLTAL 188
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
L+ L+ ++ F+ + +L ++ L FN+IT GL++L L L S
Sbjct: 189 TELY---LSSNTITSISANAFTGLSALTMVELQFNQITSIASNSFTGLSSLIFLGLSSNR 245
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS---FTGISDG 339
I TGL L L L Q+ S L+G+ L + L+ FT + G
Sbjct: 246 ITSISDNAFTGLTQLVSLTLFSNQITSISASALTGMPVLLQLTLTGNPFTTLPPG 300
>gi|242071889|ref|XP_002451221.1| hypothetical protein SORBIDRAFT_05g026000 [Sorghum bicolor]
gi|241937064|gb|EES10209.1| hypothetical protein SORBIDRAFT_05g026000 [Sorghum bicolor]
Length = 569
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 203/417 (48%), Gaps = 53/417 (12%)
Query: 83 LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM-KAFAGLINLVKLDLERC 141
L SLD + C + D L + L+ RR +T G+ K G L +L ++ C
Sbjct: 78 LSSLDLSACAGLDDASLAAALPEAPAPLLAVRRCLGVTDVGLAKVAVGCPGLERLSVKWC 137
Query: 142 TRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL-QISCSKVTDSGIA 198
I V L K +L S++I + +T+ ++ LS L L+ + + C + D G+
Sbjct: 138 REISDIGVELLAKKCPQLRSVDISYLK-VTNESLRSLSTLEKLEDIAMVGCLFIDDDGLQ 196
Query: 199 YLK---GLQK---------------LTLLNLEGCPVTAACLDSLSALGS----LFYLNLN 236
L LQ+ LT+L L+G + A+ +L A+GS L + L+
Sbjct: 197 MLSMCNSLQEIETCLLSKLSTIGETLTVLRLDGLEIFAS---NLQAIGSTCKNLVEIGLS 253
Query: 237 RCQ-LSDDGCEKF-SKIGSLKVLNLGFNEI-TDECLVHL-KGLTNLESLNLDSCG-IGDE 291
+C ++DDG + L+ +++ + T++ L + + +E L L+SC I ++
Sbjct: 254 KCNGITDDGIVSLVAHCCDLRTIDVTCCHLLTNDALAAIAENCRKIECLQLESCPFISEK 313
Query: 292 GLVNLTGLC-NLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSS 349
GL +T LC +LK ++L+D ++ + L+HL+ + L + L + ISD L ++ +
Sbjct: 314 GLERITTLCSHLKEIDLTDCRINDTALKHLASCSELLILKLGLCSSISDEGLVYISS-NC 372
Query: 350 LKSLNLDARQ---ITDTGLAALTS-LTGLTHLDL-FGARITDSGAAYLRNFKNLRSLE-- 402
K + LD + ITD GLAA+ S + L+L + +ITD+G ++ + L +LE
Sbjct: 373 GKLVELDLYRCSGITDDGLAAVASGCKKIRVLNLCYCTQITDAGLKHVSALEELTNLELR 432
Query: 403 ----ICGGGLTDA--GLTGLVSLNVSNSR-ITSAGLRHL-KPLKNLRSLTLESCKVT 451
I G G+T G T L+ L++ + AGL L + +NLR LT+ C+VT
Sbjct: 433 CLVRITGIGITSIAIGCTSLIELDLKRCYSVDDAGLWALSRYSQNLRQLTISYCQVT 489
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 180/380 (47%), Gaps = 36/380 (9%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
++D ++++A + L SVD+S VT+ L L L+ + C+ I D GL+ L
Sbjct: 140 ISDIGVELLAKKCPQLRSVDISYLKVTNESLRSLSTLEKLEDIAMVGCLFIDDDGLQMLS 199
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLD-LERCTRIHGGLVNLKGL----MKLE 158
++L + + + +++LD LE I NL+ + L
Sbjct: 200 MCNSLQEI-----ETCLLSKLSTIGETLTVLRLDGLE----IFAS--NLQAIGSTCKNLV 248
Query: 159 SLNIKWCNCITDSDMKPL-SGLTNLKSLQISCSKV--TDSGIAYLKGLQKLTLLNLEGCP 215
+ + CN ITD + L + +L+++ ++C + D+ A + +K+ L LE CP
Sbjct: 249 EIGLSKCNGITDDGIVSLVAHCCDLRTIDVTCCHLLTNDALAAIAENCRKIECLQLESCP 308
Query: 216 -VTAACLDSLSALGS-LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL 272
++ L+ ++ L S L ++L C+++D + + L +L LG + I+DE LV++
Sbjct: 309 FISEKGLERITTLCSHLKEIDLTDCRINDTALKHLASCSELLILKLGLCSSISDEGLVYI 368
Query: 273 KG-LTNLESLNLDSC-GIGDEGLVNLTGLC-NLKCLELSD-TQVGSSGLRHLSGLTNLES 328
L L+L C GI D+GL + C ++ L L TQ+ +GL+H+S L L +
Sbjct: 369 SSNCGKLVELDLYRCSGITDDGLAAVASGCKKIRVLNLCYCTQITDAGLKHVSALEELTN 428
Query: 329 INL----SFTGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLT-GLTHLDLFGA 382
+ L TGI S+ G +SL L+L + D GL AL+ + L L +
Sbjct: 429 LELRCLVRITGIGITSIA--IGCTSLIELDLKRCYSVDDAGLWALSRYSQNLRQLTISYC 486
Query: 383 RITDSGAAYLRNFKNLRSLE 402
++T G +L +LR L+
Sbjct: 487 QVTGLGLCHL--LGSLRCLQ 504
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 98/237 (41%), Gaps = 50/237 (21%)
Query: 42 PGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEH 101
P +++K ++ I + S L +DL+ + D+ L HL CS L L C ISD GL +
Sbjct: 308 PFISEKGLERITTLCSHLKEIDLTDCRINDTALKHLASCSELLILKLGLCSSISDEGLVY 367
Query: 102 LRG-LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL 160
+ L L R + IT G+ A A G K+ L
Sbjct: 368 ISSNCGKLVELDLYRCSGITDDGLAAVAS-----------------------GCKKIRVL 404
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISC-SKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
N+ +C ITD+ +K +S L L +L++ C ++T GI + GC
Sbjct: 405 NLCYCTQITDAGLKHVSALEELTNLELRCLVRITGIGITSIA----------IGCT---- 450
Query: 220 CLDSLSALGSLFYLNLNRCQLSDD-GCEKFSKIGS-LKVLNLGFNEITDECLVHLKG 274
SL L+L RC DD G S+ L+ L + + ++T L HL G
Sbjct: 451 ---------SLIELDLKRCYSVDDAGLWALSRYSQNLRQLTISYCQVTGLGLCHLLG 498
>gi|401426392|ref|XP_003877680.1| hypothetical protein, unknown function [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493926|emb|CBZ29217.1| hypothetical protein, unknown function [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 811
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 140/316 (44%), Gaps = 51/316 (16%)
Query: 63 DLSGSDVTDSGLIHLKDCSNLQSLDF--NFCIQISDGGLEHLRGL-------SNLTSLSF 113
DLS + + + L+ C NL LD +F Q GLE L L +++ SL
Sbjct: 472 DLSLAHTRVTNVTELQHCHNLWRLDLQGSFVDQAGIAGLERLPKLRVLLLSKTDVASLEL 531
Query: 114 RRNNAITAQ---------GMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMK-LESLNIK 163
+A Q AF G+ L T +N G+ K L LN+
Sbjct: 532 ILQSASLEQLEVKFSRVNEKSAFFGVTKASALTYVTLTHCDVSDINNLGMCKELRLLNV- 590
Query: 164 WCNCITDSDMKPLSGLTNLKSLQ---------------ISCSKVT-----DSGIAYLKG- 202
W + +T ++GL + KSLQ +SC+K+ S + L G
Sbjct: 591 WSSKVTSEG---IAGLCDAKSLQEVDLAETAVTDIGPLLSCTKIQALILYKSSVRSLDGI 647
Query: 203 --LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG 260
LQ+L L++ PV++ + SLSA SL LNL+ + DDG + + SLKV+++
Sbjct: 648 GALQRLRRLDIAETPVSS--IRSLSACQSLEILNLSNTAVDDDGFQGIGQAQSLKVVSMS 705
Query: 261 FNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
F IT L L ++LE L SC + EGLV L C L L LS T++ G++ L
Sbjct: 706 FTAITQ--LGQLGQCSHLEELYAQSCPVTSEGLVGLEKACCLAKLNLSYTKI-QGGIQRL 762
Query: 321 SGLTNLESINLSFTGI 336
+ L +N+ FT +
Sbjct: 763 TNCRKLLKLNVKFTEV 778
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 195/464 (42%), Gaps = 73/464 (15%)
Query: 59 LLSVDLSGSDVTDSGLIHLKD-------------CSNLQSLDFN---FCIQISDG----- 97
L SV LSG +V D+ + HL +N+Q+L IQ+S+
Sbjct: 308 LRSVHLSGCNVKDADVPHLAQLPCVEELLLSRTRITNVQALATGKGLRIIQLSNAQVDSD 367
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
G++ L+ L LT L ++ + +L+ L+L + G+ +L L+ L
Sbjct: 368 GIDGLQTLPYLTRLDL---SSTLVSDVNCLGQSQSLIYLNLAKTHVTSEGIADLSRLLTL 424
Query: 158 ESL-----NIKWCNCITDS-------------DMKPLSGLTNLKSLQ-ISCSKVTDSGIA 198
E L NI+ + + +S D L G L++LQ +S + + +
Sbjct: 425 EHLMLNNNNIRDVSFLAESHSLKTLSLQSTLVDSAALEGFGRLQTLQDLSLAHTRVTNVT 484
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN 258
L+ L L+L+G V A + L L L L L++ ++ E + SL+ L
Sbjct: 485 ELQHCHNLWRLDLQGSFVDQAGIAGLERLPKLRVLLLSKTDVA--SLELILQSASLEQLE 542
Query: 259 LGFNEITDE-CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC-NLKCLELSDTQVGSSG 316
+ F+ + ++ + + L + L C + D +N G+C L+ L + ++V S G
Sbjct: 543 VKFSRVNEKSAFFGVTKASALTYVTLTHCDVSD---INNLGMCKELRLLNVWSSKVTSEG 599
Query: 317 LRHLSGLTNLESINLSFTGISD-----------------GSLRKLAGLSSLKSL-NLDAR 358
+ L +L+ ++L+ T ++D S+R L G+ +L+ L LD
Sbjct: 600 IAGLCDAKSLQEVDLAETAVTDIGPLLSCTKIQALILYKSSVRSLDGIGALQRLRRLDIA 659
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG--- 415
+ + + +L++ L L+L + D G + ++L+ + + +T G G
Sbjct: 660 ETPVSSIRSLSACQSLEILNLSNTAVDDDGFQGIGQAQSLKVVSMSFTAITQLGQLGQCS 719
Query: 416 -LVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
L L + +TS GL L+ L L L K+ I+RL
Sbjct: 720 HLEELYAQSCPVTSEGLVGLEKACCLAKLNLSYTKIQGG-IQRL 762
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 178/437 (40%), Gaps = 62/437 (14%)
Query: 55 QGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSL--------DFNFCIQ------------- 93
Q SL+ ++L+ + VT G+ L L+ L D +F +
Sbjct: 396 QSQSLIYLNLAKTHVTSEGIADLSRLLTLEHLMLNNNNIRDVSFLAESHSLKTLSLQSTL 455
Query: 94 ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG 153
+ LE L L LS ++ NL +LDL+ G V+ G
Sbjct: 456 VDSAALEGFGRLQTLQDLSLAHTRVTNVTELQHCH---NLWRLDLQ------GSFVDQAG 506
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGL---TNLKSLQISCSKVTDSGIAY-LKGLQKLTLL 209
+ LE L ++ +D+ L + +L+ L++ S+V + + + LT +
Sbjct: 507 IAGLERLPKLRVLLLSKTDVASLELILQSASLEQLEVKFSRVNEKSAFFGVTKASALTYV 566
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
L C V+ +++L L LN+ +++ +G SL+ ++L +TD +
Sbjct: 567 TLTHCDVSD--INNLGMCKELRLLNVWSSKVTSEGIAGLCDAKSLQEVDLAETAVTD--I 622
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
L T +++L L + L + L L+ L++++T V S +R LS +LE +
Sbjct: 623 GPLLSCTKIQALILYKSSV--RSLDGIGALQRLRRLDIAETPVSS--IRSLSACQSLEIL 678
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGAR---ITD 386
NLS T + D + + SLK +++ IT G L +HL+ A+ +T
Sbjct: 679 NLSNTAVDDDGFQGIGQAQSLKVVSMSFTAITQLG-----QLGQCSHLEELYAQSCPVTS 733
Query: 387 SGAAYLRNF-----KNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLR 441
G L NL +I GG L+ LNV + + + ++K
Sbjct: 734 EGLVGLEKACCLAKLNLSYTKIQGGIQRLTNCRKLLKLNVKFTEVPYDEVAYVK------ 787
Query: 442 SLTLESCKVTANDIKRL 458
L SC+V + ++R+
Sbjct: 788 -RHLPSCRVMNDAVQRM 803
>gi|15896519|ref|NP_349868.1| ChW repeat-containing protein [Clostridium acetobutylicum ATCC 824]
gi|337738478|ref|YP_004637925.1| ChW repeat-containing protein [Clostridium acetobutylicum DSM 1731]
gi|384459988|ref|YP_005672408.1| putative surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum EA 2018]
gi|15026350|gb|AAK81208.1|AE007823_2 Possible surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum ATCC 824]
gi|325510677|gb|ADZ22313.1| putative surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum EA 2018]
gi|336291611|gb|AEI32745.1| ChW repeat-containing protein [Clostridium acetobutylicum DSM 1731]
Length = 874
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 162/329 (49%), Gaps = 33/329 (10%)
Query: 145 HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQ 204
+G + +L + KL +L I N TD D+ P+ LTNL L I SK+++ +
Sbjct: 540 YGNVTDLTPISKLSNLKILSLNGDTDIDISPIGNLTNLNQLDIGESKISNINVLNKLNNL 599
Query: 205 KLTLLNLEGCPVTAACLDSLSALGSLFYLNL---NRCQLSDDGCEKFSKIGSLKVLNLGF 261
+L+ + S LGSL L L + C SD +K+ +L ++L +
Sbjct: 600 NYLILDKN------TSIKDFSPLGSLTNLTLLQASYCNFSD--LTPLAKMKNLSRVSLNY 651
Query: 262 NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS 321
N IT + LK TNL L L I D + + L NL+ + LS QV + + L+
Sbjct: 652 NNIT--SIEPLKSSTNLVDLVLSGNKISD--ITPVANLTNLESISLSYNQV--NNISSLA 705
Query: 322 GLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG 381
LT L+S+ L TGISD + L+GL++L L + I D + +L +LT L +L +
Sbjct: 706 KLTKLKSLMLDHTGISD--ISSLSGLTNLNYLGVQDNNIED--ITSLKNLTNLANLKISQ 761
Query: 382 ARITDSGAAYLRNFKNLRSLEICGGGLTDAGL----TGLVSLNVSNSRITSAGLRHLKPL 437
+I++ A + N NL L++ +++ T L+SL++ +++++ + L L
Sbjct: 762 NKISNVDA--IGNLTNLTLLDMNNNQISNINAIKNSTKLISLSMHHNKVSD--ISALSKL 817
Query: 438 KNLRSLTLESCKVTANDIKRLQSRDLPNL 466
NL SL L + + ND+ L +DL +L
Sbjct: 818 TNLESLNLGNNPI--NDVTPL--KDLSHL 842
>gi|887026|gb|AAA69527.1| internalin, partial [Listeria monocytogenes]
Length = 346
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 177/379 (46%), Gaps = 66/379 (17%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 26 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 79
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L + N +TD + PL
Sbjct: 80 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQL--SFGNQVTD--LXPL 131
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 132 ANLTTLERLDISXNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 184
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 185 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLXGLTKLTELKLGANQISN--I 238
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
L GL L LEL++ Q+ + +S L NL + L F ISD
Sbjct: 239 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISD--------------- 281
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL 413
++ ++SLT L L + +++D + L N N+ L ++D L
Sbjct: 282 -----------ISPVSSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQISD--L 326
Query: 414 TGLVSLNVSNSRITSAGLR 432
T L +L +RIT GL
Sbjct: 327 TPLANL----TRITQLGLN 341
>gi|335427390|ref|ZP_08554321.1| Rab family protein [Haloplasma contractile SSD-17B]
gi|334895063|gb|EGM33243.1| Rab family protein [Haloplasma contractile SSD-17B]
Length = 1451
Score = 75.9 bits (185), Expect = 4e-11, Method: Composition-based stats.
Identities = 100/328 (30%), Positives = 162/328 (49%), Gaps = 32/328 (9%)
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD-SGIAYLKGLQKLTL 208
+L L +++L W +D+ L+ L+NL SL +S ++V+D + + L LQ + L
Sbjct: 1097 DLSSLQNIKTLKNLWLENNNITDLSVLANLSNLDSLYLSNNQVSDLTPLINLANLQNVYL 1156
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
N + ++ S + +L L+L+ Q++D S +L L+L N+ITD
Sbjct: 1157 SNNQ----VTTLPENFSNMLNLNGLHLSGNQITD--VTPLSTAPALIELDLSNNQITD-- 1208
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
L + LT L SLNL+ I D L L L L L L++ Q+ S L L GLTNL
Sbjct: 1209 LTNYDLLTYLFSLNLNDNSISD--LTPLANLTKLSSLRLNNNQI--SDLTPLGGLTNLTH 1264
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG 388
+ ISD L L L+ + L L+ QI+D L AL+SLT L++L + +ITD
Sbjct: 1265 LYAENNAISD--LTPLTNLNKIWYLVLNGNQISD--LTALSSLTDLSYLRMNNNQITD-- 1318
Query: 389 AAYLRNFKNLR--SLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRS 442
L +NLR L++ ++D A T + L ++N++I+ + + LR+
Sbjct: 1319 ---LSPLQNLRLSDLQLNNNLISDLSYLANSTSISKLLLNNNQISDISV--ISNFTGLRT 1373
Query: 443 LTLESCKVTANDIKRLQSRDLPNLVSFR 470
L L+ ++ D+ L S+ L+ R
Sbjct: 1374 LELDDNMIS--DLSALSSQTNLELLYLR 1399
>gi|219821285|gb|ACL37768.1| internalin A [Listeria monocytogenes]
gi|219821315|gb|ACL37788.1| internalin A [Listeria monocytogenes]
gi|219821321|gb|ACL37792.1| internalin A [Listeria monocytogenes]
gi|219821327|gb|ACL37796.1| internalin A [Listeria monocytogenes]
gi|219821345|gb|ACL37808.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 168/368 (45%), Gaps = 58/368 (15%)
Query: 74 LIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINL 133
+ LKD + L + N QI+D + L L+NLT L+ NN IT + L NL
Sbjct: 55 ITPLKDLTKLVDIVMNNN-QITD--ISPLANLTNLTGLTLF-NNQIT--DIDPLKNLTNL 108
Query: 134 VKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
+L+L T + L GL L+ L+ N +TD +KPL+ LT L+ L IS +KV+
Sbjct: 109 NRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPLANLTTLERLDISSNKVS 162
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYLNLNRCQLSDDGCEKFSK 250
D + L KLT NLE T + ++ LG +L L+LN QL D G +
Sbjct: 163 DISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGT--LAS 213
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
+ +L L++ N+I++ L L GLT L L L I + + + GL L LEL +
Sbjct: 214 LTNLTSLDVANNQISN--LAPLSGLTKLTELELGYNQISN--ISPIEGLTALTSLELHEN 269
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK----------------LAGLSSL 350
Q+ + +S L NL + L F ISD SL K LA L+++
Sbjct: 270 QL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNI 327
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN------FKNLRSLEIC 404
L+ QI+D L L +LT ++ L L T+ Y N KN+ I
Sbjct: 328 NWLSAAHNQISD--LTPLANLTRISELGLNDQEWTNPPVNYKVNVSIPNTVKNVTGALIA 385
Query: 405 GGGLTDAG 412
++D G
Sbjct: 386 PATISDGG 393
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 111/226 (49%), Gaps = 43/226 (19%)
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD----EGLVNLTG 298
DG E + +L +N GFN++TD + LK LT L + +++ I D L NLTG
Sbjct: 34 DGLEY---LNNLTQINFGFNQLTD--ITPLKDLTKLVDIVMNNNQITDISPLANLTNLTG 88
Query: 299 ----------------LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
L NL LELS + S + LSGLTNL+ LSF G L+
Sbjct: 89 LTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQ--LSF-GNQVTDLK 143
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
LA L++L+ L++ + +++D ++ L LT L L +I+D L NL L
Sbjct: 144 PLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISD--ITPLGILTNLDELS 199
Query: 403 ICGGGLTDAG----LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
+ G L D G LT L SL+V+N++I+ +L PL L LT
Sbjct: 200 LNGNQLKDIGTLASLTNLTSLDVANNQIS-----NLAPLSGLTKLT 240
>gi|428320680|ref|YP_007118562.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
gi|428244360|gb|AFZ10146.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
Length = 360
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 136/262 (51%), Gaps = 24/262 (9%)
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
SD+ PL LTNLK+L I +++ D I+ L L LT+L L+ ++ + L+ L L
Sbjct: 104 SDIAPLQSLTNLKTLVIDVNQILD--ISPLSSLINLTVLVLDTNQISD--ISPLAGLTDL 159
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L L ++SD K + +L L L N+I+D + L+ LT L++L L + I D
Sbjct: 160 TALVLFDNKISDITPVK--NLTNLNALILYNNQISD--IAPLENLTELQTLYLYNNKISD 215
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
+ L L NL L L ++ S L L LTNL + L ISD S L L++L
Sbjct: 216 --ITPLASLKNLTTLFLFGNEI--SDLTPLEALTNLNKLVLFQNKISDIS--PLTSLTNL 269
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
LNL QI+D ++ L SLT LT L LF I+DS A L+ NL L++ ++D
Sbjct: 270 IELNLGNNQISD--ISPLKSLTNLTELYLFNNPISDSSA--LQALNNLFLLDLYNNQISD 325
Query: 411 AGLTGLVSLNVSNSRITSAGLR 432
++ L SL+ ++T+ LR
Sbjct: 326 --ISSLESLH----KLTTLDLR 341
>gi|124004058|ref|ZP_01688905.1| Rab family protein [Microscilla marina ATCC 23134]
gi|123990637|gb|EAY30117.1| Rab family protein [Microscilla marina ATCC 23134]
Length = 1165
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 62/347 (17%)
Query: 97 GGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMK 156
G L L+ L+ LT LS N ++ GL+ KLDL L LK L
Sbjct: 193 GDLAPLQHLTCLTMLSLHHNKISDLAPLQKLRGLL---KLDLSNNQL--DDLHPLKSLNS 247
Query: 157 LESLNIKWCNCITD--------------------SDMKPLSGLTNLKSLQISCSKVTDSG 196
L+SL ++ N I+D +D+ PL L NL+SL + ++++D
Sbjct: 248 LQSLVLR-NNQISDLTPLQALHSLQLIVLRDNPVTDLTPLQSLRNLQSLDLRNNQISD-- 304
Query: 197 IAYLKGLQKLTLLNLEGCPVTAAC--------------------LDSLSALGSLFYLNLN 236
+ L+ L L ++L P+ L L L +L ++L+
Sbjct: 305 LTPLQNLSSLQSIDLRHNPINDLLPLQNLPNLQSIDLKYNHINDLAPLQNLPNLESIDLS 364
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
Q+SD + +L+ ++L N++ L L+ L NLES++L I D L L
Sbjct: 365 DNQISD--LTPLQNLSNLQSIDLSNNQVN--HLASLQYLPNLESIDLSDNQIND--LAPL 418
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
L +L+ ++LS+ Q+ L L L NLESI+LS ISD L L L SL+S+NL
Sbjct: 419 QNLGDLQSIDLSNNQI--HDLTPLQNLPNLESIDLSDNQISD--LTPLQNLGSLQSINLR 474
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
Q++D L+ L +L L ++L +I+D A L+ +L+S+++
Sbjct: 475 NNQVSD--LSPLQALHDLQAINLSDNQISD--LAPLQKLPHLKSIDL 517
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 156/342 (45%), Gaps = 62/342 (18%)
Query: 171 SDMKPLSGLTNLKSLQISCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTA----------- 218
SD+KPL L NL+ L +S ++V D + + L GLQ + L + +T
Sbjct: 127 SDLKPLQNLANLQMLDMSDNRVADLTPLQNLPGLQSIVLSKNKVRDLTPLQHLTGLHTLL 186
Query: 219 ------ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
L L L L L+L+ ++SD K+ L L+L N++ D L L
Sbjct: 187 LHYNKIGDLAPLQHLTCLTMLSLHHNKISD--LAPLQKLRGLLKLDLSNNQLDD--LHPL 242
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
K L +L+SL L + I D L L L +L+ + L D V + L L L NL+S++L
Sbjct: 243 KSLNSLQSLVLRNNQISD--LTPLQALHSLQLIVLRDNPV--TDLTPLQSLRNLQSLDLR 298
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITD--------------------TGLAALTSLT 372
ISD L L LSSL+S++L I D LA L +L
Sbjct: 299 NNQISD--LTPLQNLSSLQSIDLRHNPINDLLPLQNLPNLQSIDLKYNHINDLAPLQNLP 356
Query: 373 GLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG----LTGLVSLNVSNSRITS 428
L +DL +I+D L+N NL+S+++ + L L S+++S+++I
Sbjct: 357 NLESIDLSDNQISDLTP--LQNLSNLQSIDLSNNQVNHLASLQYLPNLESIDLSDNQIND 414
Query: 429 AGLRHLKPLKNLRSLTLESCKVTANDIKRLQS-RDLPNLVSF 469
L PL+NL L+S ++ N I L ++LPNL S
Sbjct: 415 -----LAPLQNLGD--LQSIDLSNNQIHDLTPLQNLPNLESI 449
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 31/225 (13%)
Query: 57 SSLLSVDLSGSDVTDSGLI--------------HLKDCSNLQSLDFNFCIQISD---GGL 99
SSL S+DL + + D + H+ D + LQ+L I +SD L
Sbjct: 312 SSLQSIDLRHNPINDLLPLQNLPNLQSIDLKYNHINDLAPLQNLPNLESIDLSDNQISDL 371
Query: 100 EHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES 159
L+ LSNL S+ N + + L NL +DL +I L L+ L L+S
Sbjct: 372 TPLQNLSNLQSIDLSNNQ---VNHLASLQYLPNLESIDLSD-NQI-NDLAPLQNLGDLQS 426
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
+++ N I D+ PL L NL+S+ +S ++++D + L+ L L +NL V+
Sbjct: 427 IDLS-NNQI--HDLTPLQNLPNLESIDLSDNQISD--LTPLQNLGSLQSINLRNNQVSD- 480
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI 264
L L AL L +NL+ Q+SD K+ LK ++L N+I
Sbjct: 481 -LSPLQALHDLQAINLSDNQISD--LAPLQKLPHLKSIDLRDNQI 522
>gi|219821270|gb|ACL37758.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 168/368 (45%), Gaps = 58/368 (15%)
Query: 74 LIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINL 133
+ LKD + L + N QI+D + L L+NLT L+ NN IT + L NL
Sbjct: 55 ITPLKDLTKLVDIVMNNN-QITD--ISPLANLTNLTGLTLF-NNQIT--DIDPLKNLTNL 108
Query: 134 VKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
+L+L T + L GL L+ L+ N +TD +KPL+ LT L+ L IS +KV+
Sbjct: 109 NRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPLANLTTLERLDISSNKVS 162
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYLNLNRCQLSDDGCEKFSK 250
D + L KLT NLE T + ++ LG +L L+LN QL D G +
Sbjct: 163 DISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGT--LAS 213
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
+ +L L++ N+I++ L L GLT L L L I + + + GL L LEL +
Sbjct: 214 LTNLTSLDVANNQISN--LAPLSGLTKLTELELGYNQISN--ISPIEGLTALTSLELHEN 269
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK----------------LAGLSSL 350
Q+ + +S L NL + L F ISD SL K LA L+++
Sbjct: 270 QL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNI 327
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN------FKNLRSLEIC 404
L+ QI+D L L +LT ++ L L T+ Y N KN+ I
Sbjct: 328 NWLSAAHNQISD--LTPLANLTRISELGLNDQEWTNPPVNYKVNVSIPNTVKNVTGALIA 385
Query: 405 GGGLTDAG 412
++D G
Sbjct: 386 PATISDGG 393
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 111/226 (49%), Gaps = 43/226 (19%)
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD----EGLVNLTG 298
DG E + +L +N GFN++TD + LK LT L + +++ I D L NLTG
Sbjct: 34 DGLEY---LNNLTQINFGFNQLTD--ITPLKDLTKLVDIVMNNNQITDISPLANLTNLTG 88
Query: 299 ----------------LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
L NL LELS + S + LSGLTNL+ LSF G L+
Sbjct: 89 LTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQ--LSF-GNQVTDLK 143
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
LA L++L+ L++ + +++D ++ L LT L L +I+D L NL L
Sbjct: 144 PLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISD--ITPLGILTNLDELS 199
Query: 403 ICGGGLTDAG----LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
+ G L D G LT L SL+V+N++I+ +L PL L LT
Sbjct: 200 LNGNQLKDIGTLASLTNLTSLDVANNQIS-----NLAPLSGLTKLT 240
>gi|290991576|ref|XP_002678411.1| predicted protein [Naegleria gruberi]
gi|284092023|gb|EFC45667.1| predicted protein [Naegleria gruberi]
Length = 153
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 77/151 (50%)
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
+ L LN+G+NEIT E + + L SL + + I D+G L+ + L L +S+
Sbjct: 1 MKQLTSLNIGYNEITVEGAKFISEMKQLTSLCIYNNEISDKGAKYLSEMKQLTSLNVSNN 60
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
+ G +H+S + L S+ + I D + ++ + L SLN+ +I+D G ++
Sbjct: 61 ETSDEGAKHISEMKQLTSLYIYDNQIGDKGAKYISEMKQLTSLNIGYNEISDEGAKYISE 120
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
+ LT L ++ I+D GA YL K L SL
Sbjct: 121 MKQLTLLYIYNNEISDKGAKYLSEMKQLTSL 151
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 1/152 (0%)
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
+ +L SLNI + N IT K +S + L SL I ++++D G YL +++LT LN+
Sbjct: 1 MKQLTSLNIGY-NEITVEGAKFISEMKQLTSLCIYNNEISDKGAKYLSEMKQLTSLNVSN 59
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
+ +S + L L + Q+ D G + S++ L LN+G+NEI+DE ++
Sbjct: 60 NETSDEGAKHISEMKQLTSLYIYDNQIGDKGAKYISEMKQLTSLNIGYNEISDEGAKYIS 119
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
+ L L + + I D+G L+ + L L
Sbjct: 120 EMKQLTLLYIYNNEISDKGAKYLSEMKQLTSL 151
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%)
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
+ L SLN+ I EG ++ + L L + + ++ G ++LS + L S+N+S
Sbjct: 1 MKQLTSLNIGYNEITVEGAKFISEMKQLTSLCIYNNEISDKGAKYLSEMKQLTSLNVSNN 60
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
SD + ++ + L SL + QI D G ++ + LT L++ I+D GA Y+
Sbjct: 61 ETSDEGAKHISEMKQLTSLYIYDNQIGDKGAKYISEMKQLTSLNIGYNEISDEGAKYISE 120
Query: 395 FKNLRSLEICGGGLTDAG 412
K L L I ++D G
Sbjct: 121 MKQLTLLYIYNNEISDKG 138
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 24/175 (13%)
Query: 203 LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
+++LT LN+ +T +S + L L + ++SD G + S++ L LN+ N
Sbjct: 1 MKQLTSLNIGYNEITVEGAKFISEMKQLTSLCIYNNEISDKGAKYLSEMKQLTSLNVSNN 60
Query: 263 EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG 322
E +DE H+ + L SL + D Q+G G +++S
Sbjct: 61 ETSDEGAKHISEMKQLTSLY------------------------IYDNQIGDKGAKYISE 96
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
+ L S+N+ + ISD + ++ + L L + +I+D G L+ + LT L
Sbjct: 97 MKQLTSLNIGYNEISDEGAKYISEMKQLTLLYIYNNEISDKGAKYLSEMKQLTSL 151
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+ L SL I +++T G ++ +++LT L + ++ LS + L LN++
Sbjct: 1 MKQLTSLNIGYNEITVEGAKFISEMKQLTSLCIYNNEISDKGAKYLSEMKQLTSLNVSNN 60
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
+ SD+G + S++ L L + N+I D+ ++ + L SLN+ I DEG ++
Sbjct: 61 ETSDEGAKHISEMKQLTSLYIYDNQIGDKGAKYISEMKQLTSLNIGYNEISDEGAKYISE 120
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
+ L L + + ++ G ++LS + L S+
Sbjct: 121 MKQLTLLYIYNNEISDKGAKYLSEMKQLTSL 151
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 9/154 (5%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI---QISDGGLEHLRGLSNLTSLSFRR 115
L S+++ +++T G + + L SL CI +ISD G ++L + LTSL+
Sbjct: 4 LTSLNIGYNEITVEGAKFISEMKQLTSL----CIYNNEISDKGAKYLSEMKQLTSLNV-S 58
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
NN + +G K + + L L + G + + +L SLNI + N I+D K
Sbjct: 59 NNETSDEGAKHISEMKQLTSLYIYDNQIGDKGAKYISEMKQLTSLNIGY-NEISDEGAKY 117
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
+S + L L I ++++D G YL +++LT L
Sbjct: 118 ISEMKQLTLLYIYNNEISDKGAKYLSEMKQLTSL 151
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 18/99 (18%)
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG 406
+ L SLN+ +IT G ++ + LT L ++ I+D GA YL K L
Sbjct: 1 MKQLTSLNIGYNEITVEGAKFISEMKQLTSLCIYNNEISDKGAKYLSEMKQL-------- 52
Query: 407 GLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
SLNVSN+ + G +H+ +K L SL +
Sbjct: 53 ----------TSLNVSNNETSDEGAKHISEMKQLTSLYI 81
>gi|363728137|ref|XP_003640464.1| PREDICTED: F-box/LRR-repeat protein 14 [Gallus gallus]
Length = 399
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 166/329 (50%), Gaps = 36/329 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM ++ L+L C + G + + L S
Sbjct: 67 RGIRRVQILSLRRSLSYVIQGMA------DIESLNLSGCYNLTDNGLGHAFVAEISSLRS 120
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 121 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 178
Query: 215 PVTA-------ACLDSLSALG--SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A + +A G L L L CQ LSD + ++ +G L+ LNL F
Sbjct: 179 RHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLSDLSLKHLARGLGRLRQLNLSFCG 238
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRH 319
I+D L+HL +++L SLNL SC I D G+++L G L L++S +VG L +
Sbjct: 239 GISDAGLLHLSHMSSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAY 298
Query: 320 LS-GLTNLESINLSFTGISD-GSLRKLAGLSSLKSLNL-DARQITDTGLAALTS-LTGLT 375
++ GL L S++L ISD G R + + L++LN+ +ITD GL + L+ LT
Sbjct: 299 IAQGLDGLRSLSLCSCHISDEGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLT 358
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEI 403
+DL+G RIT G + L+ L +
Sbjct: 359 GIDLYGCTRITKRGLERITQLPCLKVLNL 387
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 167/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ ++++SL+ + C ++D GL H + +S+L SL+ IT + A + L
Sbjct: 85 IQGMADIESLNLSGCYNLTDNGLGHAFVAEISSLRSLNLSLCKQITDSSLGRIAQYLKGL 144
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 145 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 204
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K++D + +L +GL +L LNL C ++ A L LS + SL LNL C
Sbjct: 205 QLTLQDCQKLSDLSLKHLARGLGRLRQLNLSFCGGISDAGLLHLSHMSSLRSLNLRSCDN 264
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L SL+L SC I DEG+
Sbjct: 265 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLRSLSLCSCHISDEGINR 323
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 324 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYG--CTRITKRGLERITQLP 380
Query: 349 SLKSLNLDARQITDT 363
LK LNL ++T++
Sbjct: 381 CLKVLNLGLWEMTES 395
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 135/250 (54%), Gaps = 31/250 (12%)
Query: 239 QLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHLK-GLTNLESLNLDSC-GIGDEGLV 294
Q++D + ++ + L+VL LG + IT+ L+ + GL L+SLNL SC + D G+
Sbjct: 128 QITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIG 187
Query: 295 NLTGLCN--------LKCLELSDTQVGSS-GLRHLS-GLTNLESINLSFTG-ISDGSLRK 343
+L G+ L+ L L D Q S L+HL+ GL L +NLSF G ISD L
Sbjct: 188 HLAGMTRSAAEGCLGLEQLTLQDCQKLSDLSLKHLARGLGRLRQLNLSFCGGISDAGLLH 247
Query: 344 LAGLSSLKSLNLDA-RQITDTGLA--ALTSLTGLTHLDL-FGARITDSGAAYL-RNFKNL 398
L+ +SSL+SLNL + I+DTG+ A+ SL L+ LD+ F ++ D AY+ + L
Sbjct: 248 LSHMSSLRSLNLRSCDNISDTGIMHLAMGSLR-LSGLDVSFCDKVGDQSLAYIAQGLDGL 306
Query: 399 RSLEICGGGLTDAGLT-------GLVSLNVSN-SRITSAGLRHL-KPLKNLRSLTLESC- 448
RSL +C ++D G+ GL +LN+ RIT GL + + L L + L C
Sbjct: 307 RSLSLCSCHISDEGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT 366
Query: 449 KVTANDIKRL 458
++T ++R+
Sbjct: 367 RITKRGLERI 376
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 51/202 (25%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
++D+GL+HL S+L+SL+ C ISD G+ HL
Sbjct: 240 ISDAGLLHLSHMSSLRSLNLRSCDNISDTGIMHL------------------------AM 275
Query: 129 GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
G + L LD+ C ++ + +GL L SL++ C+ + + + + L++L
Sbjct: 276 GSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLRSLSLCSCHISDEGINRMVRQMHGLRTLN 335
Query: 187 I-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
I C ++TD G+ + + L +LT ++L GC +++ G
Sbjct: 336 IGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITKRG 372
Query: 245 CEKFSKIGSLKVLNLGFNEITD 266
E+ +++ LKVLNLG E+T+
Sbjct: 373 LERITQLPCLKVLNLGLWEMTE 394
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 49/202 (24%)
Query: 272 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 322
++G+ ++ESLNL C G+G + ++ L +L C +++D+ +G ++L G
Sbjct: 85 IQGMADIESLNLSGCYNLTDNGLGHAFVAEISSLRSLNLSLCKQITDSSLGRIA-QYLKG 143
Query: 323 LTNLE---SINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLT------ 372
L LE N++ TG+ L GL LKSLNL + R ++D G+ L +T
Sbjct: 144 LEVLELGGCSNITNTGL----LLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEG 199
Query: 373 --GLTHLDLFG-ARITDSGAAYL-RNFKNLRSLEI--CGGGLTDAGLTGLVSLNVSNSRI 426
GL L L +++D +L R LR L + CGG I
Sbjct: 200 CLGLEQLTLQDCQKLSDLSLKHLARGLGRLRQLNLSFCGG-------------------I 240
Query: 427 TSAGLRHLKPLKNLRSLTLESC 448
+ AGL HL + +LRSL L SC
Sbjct: 241 SDAGLLHLSHMSSLRSLNLRSC 262
>gi|168700133|ref|ZP_02732410.1| hypothetical protein GobsU_11435 [Gemmata obscuriglobus UQM 2246]
Length = 167
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 94/157 (59%), Gaps = 8/157 (5%)
Query: 315 SGLRHLSGLTN-LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 373
+G++ L+ L L ++NL T ++D +++LA L +L +L+L +TD G+ L+ L G
Sbjct: 6 AGVKELAALNKGLTTLNLRRTRVTDVGVKELAALKALTNLDLGGTGVTDAGVKELSGLKG 65
Query: 374 LTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG---LTGL---VSLNVSNSRIT 427
LT L+L +ITD+G L KNL L++ G +TDAG L+GL V+L++SN+++T
Sbjct: 66 LTRLELRSTKITDAGVKELAALKNLNHLDLGGTKVTDAGAKELSGLNFLVTLDLSNTQVT 125
Query: 428 SAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLP 464
AG++ L L L +L L VT +K L + LP
Sbjct: 126 DAGVKALTALTGLTTLDLHGTGVTDAGLKELNAA-LP 161
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
Query: 242 DDGCEKFSKIGS-LKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
D G ++ + + L LNL +TD + L L L +L+L G+ D G+ L+GL
Sbjct: 5 DAGVKELAALNKGLTTLNLRRTRVTDVGVKELAALKALTNLDLGGTGVTDAGVKELSGLK 64
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
L LEL T++ +G++ L+ L NL ++L T ++D ++L+GL+ L +L+L Q+
Sbjct: 65 GLTRLELRSTKITDAGVKELAALKNLNHLDLGGTKVTDAGAKELSGLNFLVTLDLSNTQV 124
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSG 388
TD G+ ALT+LTGLT LDL G +TD+G
Sbjct: 125 TDAGVKALTALTGLTTLDLHGTGVTDAG 152
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 78/141 (55%), Gaps = 3/141 (2%)
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
KGLT +LNL + D G+ L L L L+L T V +G++ LSGL L + L
Sbjct: 16 KGLT---TLNLRRTRVTDVGVKELAALKALTNLDLGGTGVTDAGVKELSGLKGLTRLELR 72
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
T I+D +++LA L +L L+L ++TD G L+ L L LDL ++TD+G L
Sbjct: 73 STKITDAGVKELAALKNLNHLDLGGTKVTDAGAKELSGLNFLVTLDLSNTQVTDAGVKAL 132
Query: 393 RNFKNLRSLEICGGGLTDAGL 413
L +L++ G G+TDAGL
Sbjct: 133 TALTGLTTLDLHGTGVTDAGL 153
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 85/153 (55%), Gaps = 1/153 (0%)
Query: 219 ACLDSLSALGS-LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 277
A + L+AL L LNL R +++D G ++ + + +L L+LG +TD + L GL
Sbjct: 6 AGVKELAALNKGLTTLNLRRTRVTDVGVKELAALKALTNLDLGGTGVTDAGVKELSGLKG 65
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
L L L S I D G+ L L NL L+L T+V +G + LSGL L +++LS T ++
Sbjct: 66 LTRLELRSTKITDAGVKELAALKNLNHLDLGGTKVTDAGAKELSGLNFLVTLDLSNTQVT 125
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 370
D ++ L L+ L +L+L +TD GL L +
Sbjct: 126 DAGVKALTALTGLTTLDLHGTGVTDAGLKELNA 158
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Query: 194 DSGIAYLKGLQK-LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIG 252
D+G+ L L K LT LNL VT + L+AL +L L+L ++D G ++ S +
Sbjct: 5 DAGVKELAALNKGLTTLNLRRTRVTDVGVKELAALKALTNLDLGGTGVTDAGVKELSGLK 64
Query: 253 SLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQV 312
L L L +ITD + L L NL L+L + D G L+GL L L+LS+TQV
Sbjct: 65 GLTRLELRSTKITDAGVKELAALKNLNHLDLGGTKVTDAGAKELSGLNFLVTLDLSNTQV 124
Query: 313 GSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
+G++ L+ LT L +++L TG++D L++L
Sbjct: 125 TDAGVKALTALTGLTTLDLHGTGVTDAGLKEL 156
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 84/153 (54%), Gaps = 1/153 (0%)
Query: 170 DSDMKPLSGLTN-LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG 228
D+ +K L+ L L +L + ++VTD G+ L L+ LT L+L G VT A + LS L
Sbjct: 5 DAGVKELAALNKGLTTLNLRRTRVTDVGVKELAALKALTNLDLGGTGVTDAGVKELSGLK 64
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
L L L +++D G ++ + + +L L+LG ++TD L GL L +L+L + +
Sbjct: 65 GLTRLELRSTKITDAGVKELAALKNLNHLDLGGTKVTDAGAKELSGLNFLVTLDLSNTQV 124
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS 321
D G+ LT L L L+L T V +GL+ L+
Sbjct: 125 TDAGVKALTALTGLTTLDLHGTGVTDAGLKELN 157
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 79/140 (56%), Gaps = 1/140 (0%)
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV 216
L +LN++ +TD +K L+ L L +L + + VTD+G+ L GL+ LT L L +
Sbjct: 18 LTTLNLRRTR-VTDVGVKELAALKALTNLDLGGTGVTDAGVKELSGLKGLTRLELRSTKI 76
Query: 217 TAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT 276
T A + L+AL +L +L+L +++D G ++ S + L L+L ++TD + L LT
Sbjct: 77 TDAGVKELAALKNLNHLDLGGTKVTDAGAKELSGLNFLVTLDLSNTQVTDAGVKALTALT 136
Query: 277 NLESLNLDSCGIGDEGLVNL 296
L +L+L G+ D GL L
Sbjct: 137 GLTTLDLHGTGVTDAGLKEL 156
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 19/122 (15%)
Query: 338 DGSLRKLAGLSS-LKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
D +++LA L+ L +LNL ++TD G+ L +L LT+LDL G +TD+G L
Sbjct: 5 DAGVKELAALNKGLTTLNLRRTRVTDVGVKELAALKALTNLDLGGTGVTDAGVKEL---- 60
Query: 397 NLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIK 456
+GL GL L + +++IT AG++ L LKNL L L KVT K
Sbjct: 61 --------------SGLKGLTRLELRSTKITDAGVKELAALKNLNHLDLGGTKVTDAGAK 106
Query: 457 RL 458
L
Sbjct: 107 EL 108
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
Query: 96 DGGLEHLRGLSN-LTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGL 154
D G++ L L+ LT+L+ RR +T G+K A L L LDL G+ L GL
Sbjct: 5 DAGVKELAALNKGLTTLNLRRTR-VTDVGVKELAALKALTNLDLGGTGVTDAGVKELSGL 63
Query: 155 MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC 214
L L ++ ITD+ +K L+ L NL L + +KVTD+G L GL L L+L
Sbjct: 64 KGLTRLELRSTK-ITDAGVKELAALKNLNHLDLGGTKVTDAGAKELSGLNFLVTLDLSNT 122
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS 249
VT A + +L+AL L L+L+ ++D G ++ +
Sbjct: 123 QVTDAGVKALTALTGLTTLDLHGTGVTDAGLKELN 157
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 86/181 (47%), Gaps = 27/181 (14%)
Query: 46 DKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGL 105
D + +A+ L +++L + VTD G+ L L +LD ++D G++ L GL
Sbjct: 5 DAGVKELAALNKGLTTLNLRRTRVTDVGVKELAALKALTNLDLGGT-GVTDAGVKELSGL 63
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC 165
LT L R + IT G+K A L NL LDL GG
Sbjct: 64 KGLTRLELR-STKITDAGVKELAALKNLNHLDL-------GG------------------ 97
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
+TD+ K LSGL L +L +S ++VTD+G+ L L LT L+L G VT A L L+
Sbjct: 98 TKVTDAGAKELSGLNFLVTLDLSNTQVTDAGVKALTALTGLTTLDLHGTGVTDAGLKELN 157
Query: 226 A 226
A
Sbjct: 158 A 158
>gi|290980460|ref|XP_002672950.1| predicted protein [Naegleria gruberi]
gi|284086530|gb|EFC40206.1| predicted protein [Naegleria gruberi]
Length = 331
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 24/229 (10%)
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
+K +S + L SL IS +++ G + +++LT LN+ G + +S + L
Sbjct: 125 LKFISEMKQLISLDISYNRIDGEGAKLISEMKQLTSLNINGNVIGGEGAKFISGMKQLTS 184
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L + ++ +G + S++ L L++G N+I DE + + + L SLN+ + IGD
Sbjct: 185 LYIYNNRIGGEGAKYISEMKQLISLDIGGNQIGDEEVKLISEMKQLTSLNIANNVIGD-- 242
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
+G + + + L S+N+S+ I D + + + L S
Sbjct: 243 ----------------------AGAKFIGDMKQLTSLNISYNVIGDEGAKYINEMKQLTS 280
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
LN+ +I + G ++ + LT LD+ G RI GA ++ K L SL
Sbjct: 281 LNITRNEIGNAGAKFISEMKQLTSLDIAGNRIGGEGAKFISEMKQLISL 329
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 18/223 (8%)
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
L +S + L L+++ ++ +G + S++ L LN+ N I E + G+ L S
Sbjct: 125 LKFISEMKQLISLDISYNRIDGEGAKLISEMKQLTSLNINGNVIGGEGAKFISGMKQLTS 184
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
L + + IG EG ++ + L L++ Q+G ++ +S + L S+N++ I D
Sbjct: 185 LYIYNNRIGGEGAKYISEMKQLISLDIGGNQIGDEEVKLISEMKQLTSLNIANNVIGDAG 244
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRS 400
+ + + L SLN+ I D G + + LT L++ I ++GA ++ K L S
Sbjct: 245 AKFIGDMKQLTSLNISYNVIGDEGAKYINEMKQLTSLNITRNEIGNAGAKFISEMKQLTS 304
Query: 401 LEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSL 443
L+I G +RI G + + +K L SL
Sbjct: 305 LDIAG------------------NRIGGEGAKFISEMKQLISL 329
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 99/211 (46%), Gaps = 8/211 (3%)
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
E L + + L SL++ I EG ++ + L L ++ +G G + +SG+ L
Sbjct: 123 EKLKFISEMKQLISLDISYNRIDGEGAKLISEMKQLTSLNINGNVIGGEGAKFISGMKQL 182
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
S+ + I + ++ + L SL++ QI D + ++ + LT L++ I D
Sbjct: 183 TSLYIYNNRIGGEGAKYISEMKQLISLDIGGNQIGDEEVKLISEMKQLTSLNIANNVIGD 242
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNL 440
+GA ++ + K L SL I + D G + L SLN++ + I +AG + + +K L
Sbjct: 243 AGAKFIGDMKQLTSLNISYNVIGDEGAKYINEMKQLTSLNITRNEIGNAGAKFISEMKQL 302
Query: 441 RSLTLESCKVTANDIKRLQSRDLPNLVSFRP 471
SL + ++ K + ++ L+S R
Sbjct: 303 TSLDIAGNRIGGEGAKFIS--EMKQLISLRK 331
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 103/211 (48%), Gaps = 4/211 (1%)
Query: 146 GGLVNLKGLMKLE---SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKG 202
GG+ LK + +++ SL+I + N I K +S + L SL I+ + + G ++ G
Sbjct: 120 GGIEKLKFISEMKQLISLDISY-NRIDGEGAKLISEMKQLTSLNINGNVIGGEGAKFISG 178
Query: 203 LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
+++LT L + + +S + L L++ Q+ D+ + S++ L LN+ N
Sbjct: 179 MKQLTSLYIYNNRIGGEGAKYISEMKQLISLDIGGNQIGDEEVKLISEMKQLTSLNIANN 238
Query: 263 EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG 322
I D + + L SLN+ IGDEG + + L L ++ ++G++G + +S
Sbjct: 239 VIGDAGAKFIGDMKQLTSLNISYNVIGDEGAKYINEMKQLTSLNITRNEIGNAGAKFISE 298
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
+ L S++++ I + ++ + L SL
Sbjct: 299 MKQLTSLDIAGNRIGGEGAKFISEMKQLISL 329
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 11/173 (6%)
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
G E L ++ + L L++S ++ G + +S + L S+N++ I + ++G+
Sbjct: 121 GIEKLKFISEMKQLISLDISYNRIDGEGAKLISEMKQLTSLNINGNVIGGEGAKFISGMK 180
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL 408
L SL + +I G ++ + L LD+ G +I D + K L SL I +
Sbjct: 181 QLTSLYIYNNRIGGEGAKYISEMKQLISLDIGGNQIGDEEVKLISEMKQLTSLNIANNVI 240
Query: 409 TDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 455
DAG + L SLN+S + I G +++ +K L SL +T N+I
Sbjct: 241 GDAGAKFIGDMKQLTSLNISYNVIGDEGAKYINEMKQLTSLN-----ITRNEI 288
>gi|428313363|ref|YP_007124340.1| Leucine Rich Repeat (LRR)-containing protein [Microcoleus sp. PCC
7113]
gi|428254975|gb|AFZ20934.1| Leucine Rich Repeat (LRR)-containing protein [Microcoleus sp. PCC
7113]
Length = 254
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 89/158 (56%), Gaps = 15/158 (9%)
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
L L+ +L L L+ Q++D +++ +LK L L ++ITD L L GLT LE
Sbjct: 88 LTPLAGFTNLEVLILDSNQITD--VTPLARLTNLKDLTLAGSQITD--LTPLAGLTKLEV 143
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
L L+S I D + L GL NLK L+L Q+ L L+GL NLE+++LS I+D
Sbjct: 144 LYLESNQIKD--INPLAGLANLKTLQLMYNQIAD--LTPLAGLKNLEALHLSGNQITD-- 197
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 378
+ L GL +LK LNLD QITD +T L GL +LD
Sbjct: 198 ITPLGGLKNLKVLNLDNNQITD-----ITPLAGLANLD 230
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 93/193 (48%), Gaps = 40/193 (20%)
Query: 263 EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG 322
+ITD L L G TNLE L LDS I D + L L NLK L L+ +Q+ + L L+G
Sbjct: 84 QITD--LTPLAGFTNLEVLILDSNQITD--VTPLARLTNLKDLTLAGSQI--TDLTPLAG 137
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
LT LE + L I D + LAGL++LK+L L QI D LT L GL
Sbjct: 138 LTKLEVLYLESNQIKD--INPLAGLANLKTLQLMYNQIAD-----LTPLAGL-------- 182
Query: 383 RITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLK 438
KNL +L + G +TD GL L LN+ N++IT + L L
Sbjct: 183 -------------KNLEALHLSGNQITDITPLGGLKNLKVLNLDNNQITD--ITPLAGLA 227
Query: 439 NLRSLTLESCKVT 451
NL SL + +T
Sbjct: 228 NLDSLYVPGNPIT 240
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 90/189 (47%), Gaps = 40/189 (21%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
QI+D L L G +NL L +N IT + A L NL L L L L
Sbjct: 84 QITD--LTPLAGFTNLEVL-ILDSNQIT--DVTPLARLTNLKDLTLAGSQITD--LTPLA 136
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
GL KLE L ++ N I D+ PL+GL NLK+LQ+ +++ D + L GL+ L L+L
Sbjct: 137 GLTKLEVLYLE-SNQI--KDINPLAGLANLKTLQLMYNQIAD--LTPLAGLKNLEALHLS 191
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
G +T ++ LG L +LKVLNL N+ITD + L
Sbjct: 192 GNQIT-----DITPLGGL---------------------KNLKVLNLDNNQITD--ITPL 223
Query: 273 KGLTNLESL 281
GL NL+SL
Sbjct: 224 AGLANLDSL 232
>gi|219821324|gb|ACL37794.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 168/368 (45%), Gaps = 58/368 (15%)
Query: 74 LIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINL 133
+ LKD + L + N QI+D + L L+NLT L+ NN IT + L NL
Sbjct: 55 ITPLKDLTKLVDIVMNNN-QITD--ISPLANLTNLTGLTLF-NNQIT--DIDPLKNLTNL 108
Query: 134 VKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
+L+L T + L GL L+ L+ N +TD +KPL+ LT L+ L IS +KV+
Sbjct: 109 NRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPLANLTTLERLDISSNKVS 162
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYLNLNRCQLSDDGCEKFSK 250
D + L KLT NLE T + ++ LG +L L+LN QL D G +
Sbjct: 163 DISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGT--LAS 213
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
+ +L L++ N+I++ L L GLT L L L I + + + GL L LEL +
Sbjct: 214 LTNLTSLDVANNQISN--LAPLSGLTKLTELELGYNQISN--ISPIAGLTALTSLELHEN 269
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK----------------LAGLSSL 350
Q+ + +S L NL + L F ISD SL K LA L+++
Sbjct: 270 QL--EDISPISNLKNLTYLALYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNI 327
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN------FKNLRSLEIC 404
L+ QI+D L L +LT ++ L L T+ Y N KN+ I
Sbjct: 328 NWLSAAHNQISD--LTPLANLTRISELGLNDQEWTNPPVNYKVNVSIPNTVKNVTGALIA 385
Query: 405 GGGLTDAG 412
++D G
Sbjct: 386 PATISDGG 393
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 111/226 (49%), Gaps = 43/226 (19%)
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD----EGLVNLTG 298
DG E + +L +N GFN++TD + LK LT L + +++ I D L NLTG
Sbjct: 34 DGLEY---LNNLTQINFGFNQLTD--ITPLKDLTKLVDIVMNNNQITDISPLANLTNLTG 88
Query: 299 ----------------LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
L NL LELS + S + LSGLTNL+ LSF G L+
Sbjct: 89 LTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQ--LSF-GNQVTDLK 143
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
LA L++L+ L++ + +++D ++ L LT L L +I+D L NL L
Sbjct: 144 PLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISD--ITPLGILTNLDELS 199
Query: 403 ICGGGLTDAG----LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
+ G L D G LT L SL+V+N++I+ +L PL L LT
Sbjct: 200 LNGNQLKDIGTLASLTNLTSLDVANNQIS-----NLAPLSGLTKLT 240
>gi|290990770|ref|XP_002678009.1| predicted protein [Naegleria gruberi]
gi|284091619|gb|EFC45265.1| predicted protein [Naegleria gruberi]
Length = 329
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 106/212 (50%), Gaps = 10/212 (4%)
Query: 199 YLKGLQKLTLLNLEGC------PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIG 252
++K K +++N++ C P + + L SL+ ++ Q+ +G + S++
Sbjct: 96 FMKSQFKNSIVNVKFCYRLRNSPDKVKFISEMKQLTSLY---ISDNQIGVEGAKYISEMK 152
Query: 253 SLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQV 312
L L++ +N+I E ++ + L SLN+ GIG EG ++ + L L + Q+
Sbjct: 153 QLTSLDITYNQIGVEGSKYISEMKQLTSLNIYYNGIGVEGTKYISEMKQLTSLNIGYNQI 212
Query: 313 GSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT 372
G G +++S + L S+++ + GI + ++ + L SLN+ QI G ++ +
Sbjct: 213 GVEGAKYISEMKQLTSLDIYYNGIGVEGSKYISEMKQLTSLNIGYNQIGVEGSKFISEMK 272
Query: 373 GLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
LT L++ G +I GA ++ K L SL+I
Sbjct: 273 QLT-LNITGNQIGVEGAKFISEMKQLTSLDIT 303
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
+ L SL + IG EG ++ + L L+++ Q+G G +++S + L S+N+ +
Sbjct: 127 MKQLTSLYISDNQIGVEGAKYISEMKQLTSLDITYNQIGVEGSKYISEMKQLTSLNIYYN 186
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
GI + ++ + L SLN+ QI G ++ + LT LD++ I G+ Y+
Sbjct: 187 GIGVEGTKYISEMKQLTSLNIGYNQIGVEGAKYISEMKQLTSLDIYYNGIGVEGSKYISE 246
Query: 395 FKNLRSLEICGGGLTDAGLTG--------LVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
K L SL I G G+ G ++LN++ ++I G + + +K L SL +
Sbjct: 247 MKQLTSLNI---GYNQIGVEGSKFISEMKQLTLNITGNQIGVEGAKFISEMKQLTSLDIT 303
Query: 447 SCKVTA------NDIKRLQSRDL 463
++ +++K+L S D+
Sbjct: 304 YNQIGVEGSKFISEMKQLTSLDI 326
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 118/255 (46%), Gaps = 27/255 (10%)
Query: 151 LKGLMKLESLNIKWCNCITDS--DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTL 208
+K K +N+K+C + +S +K +S + L SL IS +++ G Y+ +++LT
Sbjct: 97 MKSQFKNSIVNVKFCYRLRNSPDKVKFISEMKQLTSLYISDNQIGVEGAKYISEMKQLTS 156
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
L++ Q+ +G + S++ L LN+ +N I E
Sbjct: 157 LDI------------------------TYNQIGVEGSKYISEMKQLTSLNIYYNGIGVEG 192
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
++ + L SLN+ IG EG ++ + L L++ +G G +++S + L S
Sbjct: 193 TKYISEMKQLTSLNIGYNQIGVEGAKYISEMKQLTSLDIYYNGIGVEGSKYISEMKQLTS 252
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG 388
+N+ + I + ++ + L +LN+ QI G ++ + LT LD+ +I G
Sbjct: 253 LNIGYNQIGVEGSKFISEMKQL-TLNITGNQIGVEGAKFISEMKQLTSLDITYNQIGVEG 311
Query: 389 AAYLRNFKNLRSLEI 403
+ ++ K L SL+I
Sbjct: 312 SKFISEMKQLTSLDI 326
>gi|343414400|emb|CCD21001.1| leucine-rich repeat protein [Trypanosoma vivax Y486]
Length = 511
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 135/413 (32%), Positives = 184/413 (44%), Gaps = 79/413 (19%)
Query: 86 LDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIH 145
LD + C I+D + L L L L IT + + LI L KL+L CT I
Sbjct: 2 LDLSHCTGITD--VSPLTTLIELKELDLNDCTGIT--DVSPLSTLIRLEKLNLSDCTGIT 57
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQ 204
+ L L++LE LN+ C IT D+ PL+ L LK L ++ C+++TD ++ L L
Sbjct: 58 D-VSPLSTLIRLEKLNLSGCTGIT--DVSPLTTLIELKELDLNDCTRITD--VSPLSTLI 112
Query: 205 KLTLLNLEGC-------PVTA------ACL---------DSLSALGSLFYLNLNRC---- 238
+L L L GC P+T CL L+ L L L L+ C
Sbjct: 113 RLEKLCLSGCTGITDVSPLTTLIELKELCLSGCTGITDVSPLTTLIELKELGLSGCTGIT 172
Query: 239 ------------QLSDDGCEKFSKIGS------LKVLNL-GFNEITDECLVHLKGLTNLE 279
+L GC + + LKVL L G ITD + L L L+
Sbjct: 173 DVSPLTTLIELKELGLSGCTGITDVSPLTTLIRLKVLYLIGCTGITD--VSPLTTLIELK 230
Query: 280 SLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF----T 334
L+L C GI D + LT L LK L LS G +G+ +S LT L + + + T
Sbjct: 231 ELDLHDCTGITD--VSPLTTLIELKELGLS----GCTGITDVSPLTTLIRLEVLYLIGCT 284
Query: 335 GISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYL 392
GI+D S L L LK L+L D ITD ++ LT+L L L L+G RITD + L
Sbjct: 285 GITDVS--PLTTLIELKELDLHDCTGITD--VSPLTTLIELKELALYGCTRITD--VSPL 338
Query: 393 RNFKNLRSLEICG-GGLTD-AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSL 443
L L + G G+TD + LT L+ L V I G+ + PL L L
Sbjct: 339 SALIRLEKLCLSGCTGITDVSPLTTLIRLEVLY-LIGCTGITDVSPLTTLIEL 390
>gi|290989491|ref|XP_002677371.1| Hypothetical protein NAEGRDRAFT_67509 [Naegleria gruberi]
gi|284090978|gb|EFC44627.1| Hypothetical protein NAEGRDRAFT_67509 [Naegleria gruberi]
Length = 350
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 15/295 (5%)
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
N + ++ +K SG NL L + + + +L L +LT LN++ + +DS+
Sbjct: 56 INILLETLLKSFSG-RNLTKLDLRRNFIHAKLAEHLGNLHQLTDLNVDDSFIVEPAIDSI 114
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
L L L++N L + ++ L VL++ N + L+ L+NL LN+
Sbjct: 115 RYLTKLSTLSINSNNLKTKELKIIKEMKQLTVLSIAKNSMQSGGAKLLRNLSNLTILNIS 174
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS------FTGISD 338
+ IG+EG L + L L +S T + S G+ +L+ NL +N S F+
Sbjct: 175 NNRIGNEGWKYLCSMKQLTKLNISGTNISSEGISYLTNFPNLTELNFSGNTSLRFSQKVQ 234
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 398
L +L L+ L + I D L + L LT L L + D+ A ++ + L
Sbjct: 235 EQLSELKYLTKLVINYIHPIPIDD--LQYIHKLEKLTSLSLKSNFMYDASAIHISKCEKL 292
Query: 399 RSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 447
L++ L+DA L L LN+S + ++ G+ L+ + L SL ES
Sbjct: 293 TYLDVAINNLSDAAAEAFSHLPNLKYLNISENYLSKKGVELLRNMPQLTSLIYES 347
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 11/176 (6%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
L++ SNL L+ + +I + G ++L + LT L+ N I+++G+ NL +L
Sbjct: 162 LRNLSNLTILNISNN-RIGNEGWKYLCSMKQLTKLNISGTN-ISSEGISYLTNFPNLTEL 219
Query: 137 D------LERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCS 190
+ L ++ L LK L KL I + + I D++ + L L SL + +
Sbjct: 220 NFSGNTSLRFSQKVQEQLSELKYLTKLV---INYIHPIPIDDLQYIHKLEKLTSLSLKSN 276
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCE 246
+ D+ ++ +KLT L++ ++ A ++ S L +L YLN++ LS G E
Sbjct: 277 FMYDASAIHISKCEKLTYLDVAINNLSDAAAEAFSHLPNLKYLNISENYLSKKGVE 332
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 9/156 (5%)
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
L+ SG NL ++L I L L L LN+D I + + ++ LT L+
Sbjct: 64 LKSFSG-RNLTKLDLRRNFIHAKLAEHLGNLHQLTDLNVDDSFIVEPAIDSIRYLTKLST 122
Query: 377 LDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAG 430
L + + ++ K L L I + G L+ L LN+SN+RI + G
Sbjct: 123 LSINSNNLKTKELKIIKEMKQLTVLSIAKNSMQSGGAKLLRNLSNLTILNISNNRIGNEG 182
Query: 431 LRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
++L +K L L + +++ I L + PNL
Sbjct: 183 WKYLCSMKQLTKLNISGTNISSEGISYLT--NFPNL 216
>gi|254410000|ref|ZP_05023780.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
gi|196183036|gb|EDX78020.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
Length = 1115
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 179/365 (49%), Gaps = 37/365 (10%)
Query: 54 SQGSSLLSVDLSGSDVTD-----SGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNL 108
SQ +L ++LSG+ +T S L++L S L N Q E + L NL
Sbjct: 88 SQLVNLTKLNLSGNQLTQVSESISQLVNLTQLS----LSGNQLTQFP----ESISQLVNL 139
Query: 109 TSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCN 166
T LS RN Q ++ + L+NL +L+L + T++ + L L +L+ L++
Sbjct: 140 TQLSLSRNQL--TQVPESISQLVNLTQLNLSYNQLTQVPESISQLVNLTQLD-LSVNKLT 196
Query: 167 CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA 226
+ +S +S L NL L +S +++T + + L LT L+L G +T +S+S
Sbjct: 197 QVPES----ISQLVNLTQLNLSYNQLTQVSES-ISQLVNLTQLSLSGNKLTQVS-ESISQ 250
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC 286
L +L L+L+ +L+ E S++ +L L+L N++T + + L NL L+L S
Sbjct: 251 LVNLTQLSLSGNKLTQ-VPESISQLVNLTQLSLSDNQLT-QVSESISQLVNLTQLDLSSN 308
Query: 287 GIGDEGLVNLTGLCNLKCLELSD---TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
+ +++ L NL L+LS TQV S +S L NL +NLS ++
Sbjct: 309 QLTQVS-ESISQLVNLTQLDLSSNQLTQVSES----ISQLVNLTQLNLSINKLTQVP-ES 362
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
++ L +L LNL Q+T +++ L LT LDLFG +IT+ +L NL+ L++
Sbjct: 363 ISQLVNLTWLNLSDNQLTQVP-ESISQLVNLTQLDLFGNKITEI-PDWLEELPNLKELDL 420
Query: 404 CGGGL 408
L
Sbjct: 421 RQNPL 425
>gi|167393817|ref|XP_001740724.1| F-box/leucine rich repeat protein [Entamoeba dispar SAW760]
gi|165895051|gb|EDR22856.1| F-box/leucine rich repeat protein, putative [Entamoeba dispar
SAW760]
Length = 659
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 165/366 (45%), Gaps = 44/366 (12%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
LS SD G I+L C++L+ L N +++ L+ L + NL +S + ++
Sbjct: 260 LSPSD----GFIYLAGCNSLRYLYLNES-EVTSYHLDVLARMDNLLGISLKGCPTLSDYS 314
Query: 124 MKAF-AGLI--NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
+ F G I +L +L++ H GL + L L L+I CN I + PL+ L
Sbjct: 315 LTPFKTGPIRNSLEELNISDTMVTHIGLQIVARLKYLRVLDISRCNGI--KILSPLNSLK 372
Query: 181 NLKSLQISCSKVTDSGI--AYLKGLQKLTLLNLEGCPVTAACLDSL-SALGSLFYLNLNR 237
L+ L++S +V + A+ + L L ++ P+ + L + S +L +NL
Sbjct: 373 YLEVLRLSNVRVNSDTLQDAFRTPPKYLQQLLVDAGPIDDSLLTVICSKFPNLVSVNLKE 432
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNL 296
Q++ G E + L+ ++ G + D+ L +T+LE+++ + C I EG+ L
Sbjct: 433 SQITSPGVEALQMVKYLRYVDFGKTSVDDQVFEFLCKITSLETISFEGCQNISGEGVHVL 492
Query: 297 TGLCNLKCL--------------ELSD-----------TQVGSSGLRHLSGLTNLESINL 331
L L+ L E+ D +Q+G G ++++ + ++ ++L
Sbjct: 493 EPLRGLRVLNFNGCKNFSEYALKEMEDLSVETLRVAGASQIGMMGWKYIAQIEQIKRLDL 552
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
SFT + D ++++ L+ + L ++TD + L + +D AR T+ Y
Sbjct: 553 SFTSVDDNGVQEILKSKWLEVIYLRHTKVTDKSIETLLCCNLIRKID---ARETNVVKQY 609
Query: 392 LRNFKN 397
NF N
Sbjct: 610 --NFSN 613
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 137/318 (43%), Gaps = 37/318 (11%)
Query: 144 IHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGL 203
+ G + N+ L SL I ITDSD+ + LT LK L IS K I L +
Sbjct: 154 VSGSVQNITKYTSLTSLQIY---NITDSDIPSIGKLTGLKKLSISSKKFI-GKIEDLIDV 209
Query: 204 QKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNE 263
+LT L + P+ +L L ++ C L G + + L + GF
Sbjct: 210 SQLTSLEISNAPLGPEFYYNLYLFPYLVFIGFTHCHLPISGVSAQTPLSQLSPSD-GF-- 266
Query: 264 ITDECLVHLKGLTNLESLNLDSCGIGDEGL------VNLTGLCNLKCLELSD---TQVGS 314
++L G +L L L+ + L NL G+ C LSD T +
Sbjct: 267 ------IYLAGCNSLRYLYLNESEVTSYHLDVLARMDNLLGISLKGCPTLSDYSLTPFKT 320
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 374
+R+ +LE +N+S T ++ L+ +A L L+ L++ +R L+ L SL L
Sbjct: 321 GPIRN-----SLEELNISDTMVTHIGLQIVARLKYLRVLDI-SRCNGIKILSPLNSLKYL 374
Query: 375 THLDLFGARITDS--GAAYLRNFKNLRSLEICGGGLTDAGLT-------GLVSLNVSNSR 425
L L R+ A+ K L+ L + G + D+ LT LVS+N+ S+
Sbjct: 375 EVLRLSNVRVNSDTLQDAFRTPPKYLQQLLVDAGPIDDSLLTVICSKFPNLVSVNLKESQ 434
Query: 426 ITSAGLRHLKPLKNLRSL 443
ITS G+ L+ +K LR +
Sbjct: 435 ITSPGVEALQMVKYLRYV 452
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 122/284 (42%), Gaps = 32/284 (11%)
Query: 175 PLSGLTNLKSLQISCSKVTDS-GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
P+SG+ S Q S+++ S G YL G L L L VT+ LD L+ + +L +
Sbjct: 247 PISGV----SAQTPLSQLSPSDGFIYLAGCNSLRYLYLNESEVTSYHLDVLARMDNLLGI 302
Query: 234 NLNRCQ-LSDDGCEKFSKIG----SLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
+L C LSD F K G SL+ LN+ +T L + L L L++ C
Sbjct: 303 SLKGCPTLSDYSLTPF-KTGPIRNSLEELNISDTMVTHIGLQIVARLKYLRVLDISRCN- 360
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLR--HLSGLTNLESINLSFTGISDGSLRKL-A 345
G + L L L L+ L LS+ +V S L+ + L+ + + I D L + +
Sbjct: 361 GIKILSPLNSLKYLEVLRLSNVRVNSDTLQDAFRTPPKYLQQLLVDAGPIDDSLLTVICS 420
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
+L S+NL QIT G+ AL + L ++D + D +L +L ++ G
Sbjct: 421 KFPNLVSVNLKESQITSPGVEALQMVKYLRYVDFGKTSVDDQVFEFLCKITSLETISFEG 480
Query: 406 GGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
I+ G+ L+PL+ LR L CK
Sbjct: 481 C-----------------QNISGEGVHVLEPLRGLRVLNFNGCK 507
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 127/302 (42%), Gaps = 37/302 (12%)
Query: 156 KLESL--NIKWCNCITDSDM---KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
KL SL IK N +S+M ++ L+NL SL+ C K++ + L L++L N
Sbjct: 86 KLSSLFREIKRLNVDPNSEMDCSALVTRLSNLTSLK--CGKISQDTLDELYTLKRLECPN 143
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQL---SDDGCEKFSKIGSLKVLNLGFNEITDE 267
+ P + S S Y +L Q+ +D K+ LK L++ + +
Sbjct: 144 VIP-PYGVEQIVSGSVQNITKYTSLTSLQIYNITDSDIPSIGKLTGLKKLSISSKKFIGK 202
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
+ L ++ L SL + + +G E NL L + + + SG+ + L+ L
Sbjct: 203 -IEDLIDVSQLTSLEISNAPLGPEFYYNLYLFPYLVFIGFTHCHLPISGVSAQTPLSQLS 261
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG-ARITD 386
SDG + LAG +SL+ L L+ ++T L L + L + L G ++D
Sbjct: 262 P--------SDGFIY-LAGCNSLRYLYLNESEVTSYHLDVLARMDNLLGISLKGCPTLSD 312
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
+ SLE LN+S++ +T GL+ + LK LR L +
Sbjct: 313 YSLTPFKTGPIRNSLE---------------ELNISDTMVTHIGLQIVARLKYLRVLDIS 357
Query: 447 SC 448
C
Sbjct: 358 RC 359
>gi|357511813|ref|XP_003626195.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355501210|gb|AES82413.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 679
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 211/440 (47%), Gaps = 45/440 (10%)
Query: 69 VTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEHLRGLS---NLTSLSFRRNNAITAQGM 124
VTD GL + CS L+ L +C++ISD G++ L N +S+ + +T + +
Sbjct: 197 VTDIGLAKIAVGCSKLEKLSLKWCLEISDLGIDLLSKKCFDLNFLDVSYLK---VTNESL 253
Query: 125 KAFAGLINLVKLDLERCTRI-HGGLVNL-KGLMKLESLNIKWCNCITDSD-MKPLSGLTN 181
++ A L+ L + C + GL L KG L+++++ CNC++ S + +SG
Sbjct: 254 RSIASLLKLEVFIMVGCYLVDDAGLQFLEKGCPLLKAIDVSRCNCVSPSGLLSVISGHEG 313
Query: 182 LKSLQI-SC-SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL-SALGSLFYLNLNRC 238
L+ + C S+++ LK L+ L+++ ++G V+ L + S SL L L++C
Sbjct: 314 LEQINAGHCLSELSAPLTNGLKNLKHLSVIRIDGVRVSDFILQIIGSNCKSLVELGLSKC 373
Query: 239 -QLSDDGCEKFSKIGSLKVLNLGFNE-ITDECLVHLK-GLTNLESLNLDSCGIGDE-GLV 294
+++ G + +L L+L +TD + + NL L L+SC + E GL
Sbjct: 374 IGVTNMGIMQVVGCCNLTTLDLTCCRFVTDAAISTIANSCPNLACLKLESCDMVTEIGLY 433
Query: 295 NLTGLC-NLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLA-GLSSL 350
+ C L+ L+L+D V L++LS + L + L T ISD L +A L
Sbjct: 434 QIGSSCLMLEELDLTDCSGVNDIALKYLSRCSKLVRLKLGLCTNISDIGLAHIACNCPKL 493
Query: 351 KSLNL-DARQITDTGLAALTS-LTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICGGG 407
L+L +I D GLAALT+ L L+L + RITD+G + N L E+ G
Sbjct: 494 TELDLYRCVRIGDDGLAALTTGCNKLAMLNLAYCNRITDAGLKCISNLGELSDFEL--RG 551
Query: 408 LTDAGLTGLVSLNVSNSRITSAGLRHLKPL------------KNLRSLTLESCKVT---- 451
L++ G+ ++ VS R+ + L+H + L +NL + + C V+
Sbjct: 552 LSNITSIGIKAVAVSCKRLANLDLKHCEKLDDTGFRALAFYSQNLLQINMSYCNVSDHVL 611
Query: 452 ---ANDIKRLQSRDLPNLVS 468
+++KRLQ L LV+
Sbjct: 612 WLLMSNLKRLQDAKLVYLVN 631
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 20 LTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGS-DVTDSGLIHL 77
+ +++L+ C+ L L LG ++D + IA L +DL + D GL L
Sbjct: 453 VNDIALKYLSRCSKLVRLKLGLCTNISDIGLAHIACNCPKLTELDLYRCVRIGDDGLAAL 512
Query: 78 KD-CSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVK 135
C+ L L+ +C +I+D GL+ + L L+ R + IT+ G+KA A L
Sbjct: 513 TTGCNKLAMLNLAYCNRITDAGLKCISNLGELSDFELRGLSNITSIGIKAVAVSCKRLAN 572
Query: 136 LDLERCTRIHG-GLVNLKGLMK-LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
LDL+ C ++ G L + L +N+ +CN ++D + L ++NLK LQ
Sbjct: 573 LDLKHCEKLDDTGFRALAFYSQNLLQINMSYCN-VSDHVLWLL--MSNLKRLQ------- 622
Query: 194 DSGIAYL 200
D+ + YL
Sbjct: 623 DAKLVYL 629
>gi|426371210|ref|XP_004052544.1| PREDICTED: F-box/LRR-repeat protein 14 [Gorilla gorilla gorilla]
Length = 307
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 159/311 (51%), Gaps = 53/311 (17%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLD 137
K+ +L++L+ + C QI+D L + AQ +K L L+
Sbjct: 20 KEIGSLRALNLSLCKQITDSSLGRI------------------AQYLKG------LEVLE 55
Query: 138 LERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LKSLQI 187
L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+ L +
Sbjct: 56 LGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTL 115
Query: 188 S-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-QLSDD 243
C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C +SD
Sbjct: 116 QDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDT 175
Query: 244 GCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL----VN 295
G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 176 GIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQ 234
Query: 296 LTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L LK
Sbjct: 235 MHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYG--CTRITKRGLERITQLPCLKV 291
Query: 353 LNLDARQITDT 363
LNL Q+TD+
Sbjct: 292 LNLGLWQMTDS 302
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 154/317 (48%), Gaps = 47/317 (14%)
Query: 152 KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKL 206
K + L +LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L
Sbjct: 20 KEIGSLRALNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRL 77
Query: 207 TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
LNL C LS +G + R + +GC +G ++ ++TD
Sbjct: 78 KSLNLRSCR-------HLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTD 123
Query: 267 ECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-G 322
L H+ +GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G
Sbjct: 124 LSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMG 183
Query: 323 LTNLESINLSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDL 379
L +++SF + D SL +A GL LKSL+L + I+D G+ + + GL L++
Sbjct: 184 SLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNI 243
Query: 380 FG-ARITDSGAAYL-RNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPL 437
RITD G + + L +++ G +RIT GL + L
Sbjct: 244 GQCVRITDKGLELIAEHLSQLTGIDLYG-----------------CTRITKRGLERITQL 286
Query: 438 KNLRSLTLESCKVTAND 454
L+ L L ++T ++
Sbjct: 287 PCLKVLNLGLWQMTDSE 303
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 121 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 180
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 181 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 240
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 241 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 277
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 278 RGLERITQLPCLKVLNLGLWQMTD 301
>gi|75907715|ref|YP_322011.1| small GTP-binding protein domain-containing protein [Anabaena
variabilis ATCC 29413]
gi|75701440|gb|ABA21116.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
29413]
Length = 1107
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 167/337 (49%), Gaps = 36/337 (10%)
Query: 129 GLINLVKLD-----LERCTRIHGGLVNLKGLM--KLESLNIKWCNCITDSDMKPLSGLTN 181
GL NL KLD LER + +++L+ L+ ++E I + ++ LTN
Sbjct: 78 GLPNLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIP----------EAIANLTN 127
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
L L + +++T++ A K L LT L+L +T ++++ L +L +L L Q++
Sbjct: 128 LTHLILFSNQITETPEAIAK-LTNLTQLDLSDNQITEIP-EAIANLTNLTHLILFSNQIT 185
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD--EGLVNLTGL 299
+ E + + +L L+LG N+IT E + LTNL L+L I + + + NLT L
Sbjct: 186 E-IPEAIANLTNLTQLDLGDNQIT-EIPKAIANLTNLTQLDLGDNQITEIPKAIANLTNL 243
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 359
+L T++ + ++ LTNL ++LS+ I++ + +A L++L L L +
Sbjct: 244 THLILFSNQITEIPEA----IANLTNLMQLDLSYNQITEIP-KAIANLTNLTQLVLSDNK 298
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD-----AGLT 414
IT+ A+ +LT LT LDL +IT+ + N NL L +T A LT
Sbjct: 299 ITEIP-EAIANLTNLTQLDLSDNKITEIPET-IANLTNLTELYFNYNKITQIAEAIAKLT 356
Query: 415 GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
L L++S+++IT + L NL L L K+T
Sbjct: 357 NLTELHLSSNQITQIP-EAIANLTNLTELYLNYNKIT 392
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 149/309 (48%), Gaps = 34/309 (11%)
Query: 154 LMKLESL----NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
L +LESL + + D +K +SG NLK+L + L GL L L
Sbjct: 38 LQQLESLILGKQVGGYEWVGDRYLKKVSG-NNLKTLPLE-----------LLGLPNLRKL 85
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
++ G P+ D ++ + L L L R ++++ E + + +L L L N+IT E
Sbjct: 86 DISGNPL-ERIPDLVTQILHLEELILIRVEITE-IPEAIANLTNLTHLILFSNQIT-ETP 142
Query: 270 VHLKGLTNLESLNLDSCGIGD--EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
+ LTNL L+L I + E + NLT L +L T++ + ++ LTNL
Sbjct: 143 EAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEA----IANLTNLT 198
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDS 387
++L I++ + +A L++L L+L QIT+ A+ +LT LTHL LF +IT+
Sbjct: 199 QLDLGDNQITEIP-KAIANLTNLTQLDLGDNQITEIP-KAIANLTNLTHLILFSNQITEI 256
Query: 388 GAAYLRNFKNLRSLEICGGGLTD-----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRS 442
A + N NL L++ +T+ A LT L L +S+++IT + L NL
Sbjct: 257 PEA-IANLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKITEIP-EAIANLTNLTQ 314
Query: 443 LTLESCKVT 451
L L K+T
Sbjct: 315 LDLSDNKIT 323
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 159/327 (48%), Gaps = 43/327 (13%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L +DLS + +T+ + + +NL L F QI++ E + L+NLT L +
Sbjct: 149 TNLTQLDLSDNQITEIPEA-IANLTNLTHLIL-FSNQITEIP-EAIANLTNLTQLDLG-D 204
Query: 117 NAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N IT + KA A L NL +LDL + T I + NL L L I + N IT+ +
Sbjct: 205 NQIT-EIPKAIANLTNLTQLDLGDNQITEIPKAIANLTNLTHL----ILFSNQITEIP-E 258
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
++ LTNL L +S +++T+ A + L LT L L +T ++++ L +L L+
Sbjct: 259 AIANLTNLMQLDLSYNQITEIPKA-IANLTNLTQLVLSDNKITEIP-EAIANLTNLTQLD 316
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
L+ ++++ E + + +L L +N+IT + + LTNL L+L S I
Sbjct: 317 LSDNKITE-IPETIANLTNLTELYFNYNKIT-QIAEAIAKLTNLTELHLSSNQI------ 368
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
TQ+ + ++ LTNL + L++ I+ + +A L++L L+
Sbjct: 369 ---------------TQIPEA----IANLTNLTELYLNYNKITQIA-EAIAKLTNLTELH 408
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFG 381
LD QIT AL SL L LDL G
Sbjct: 409 LDGNQITQIP-EALESLPKLEKLDLRG 434
>gi|428173790|gb|EKX42690.1| hypothetical protein GUITHDRAFT_73681, partial [Guillardia theta
CCMP2712]
Length = 439
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 164/386 (42%), Gaps = 44/386 (11%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK-----GLMK 156
GLS+L +L NN +++ F+GL L L L H L+NL GL
Sbjct: 14 FNGLSSLQTLELS-NNRLSSLSEGVFSGLSALQFLQLH-----HNALLNLPSNVFDGLSS 67
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV 216
L+ L + N ++ GL +L++L +S ++++ G L L+L +
Sbjct: 68 LQQLYVH-NNVLSTLGPNTFKGLASLQNLDLSYNQLSTLPPDSFNGSSSLQTLSLFSNKI 126
Query: 217 TAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT 276
T D+ L L YL L QLS FS + L++L+L N +T GL+
Sbjct: 127 TNISSDAFRGLPGLKYLGLFDNQLSSLSEGVFSGLSGLQILSLYNNRVTSLPSNAFSGLS 186
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS---------SGLRHLS------ 321
L+ L+L++ I D L GL LK L L+ Q+ S S L+ L
Sbjct: 187 VLQELDLNNNQISDISLSAFNGLSGLKTLNLNSNQLSSLPSNAFFGLSALQQLQLDGNRI 246
Query: 322 ---------GLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT 372
GL+ LE +++SF + GLS+LK L++ QI+ A LT
Sbjct: 247 SSISMDAFDGLSALEELHMSFNQLQTVLSSNFNGLSALKLLDIQNNQISSISSGAFNGLT 306
Query: 373 GLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL---TDAGLTGLVSLN-----VSNS 424
LT L L G ++T A + L SL + L + L+ LN +S +
Sbjct: 307 ALTSLSLNGNKLTSIPAGVFDGLQYLESLILSSNQLECISSNAFASLLFLNLEELYLSYN 366
Query: 425 RITSAGLRHLKPLKNLRSLTLESCKV 450
++TS L L L +LTL + V
Sbjct: 367 QLTSLPLGVFNGLSKLVTLTLSNNHV 392
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 143/319 (44%), Gaps = 30/319 (9%)
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
+ + +T + +GL++L++L++S ++++ GL L L L + +
Sbjct: 2 YWSYLTSLPLGVFNGLSSLQTLELSNNRLSSLSEGVFSGLSALQFLQLHHNALLNLPSNV 61
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
L SL L ++ LS G F + SL+ L+L +N+++ G ++L++L+L
Sbjct: 62 FDGLSSLQQLYVHNNVLSTLGPNTFKGLASLQNLDLSYNQLSTLPPDSFNGSSSLQTLSL 121
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGS---------SGLRHL-------------- 320
S I + GL LK L L D Q+ S SGL+ L
Sbjct: 122 FSNKITNISSDAFRGLPGLKYLGLFDNQLSSLSEGVFSGLSGLQILSLYNNRVTSLPSNA 181
Query: 321 -SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
SGL+ L+ ++L+ ISD SL GLS LK+LNL++ Q++ A L+ L L L
Sbjct: 182 FSGLSVLQELDLNNNQISDISLSAFNGLSGLKTLNLNSNQLSSLPSNAFFGLSALQQLQL 241
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTDA------GLTGLVSLNVSNSRITSAGLRH 433
G RI+ L L + L GL+ L L++ N++I+S
Sbjct: 242 DGNRISSISMDAFDGLSALEELHMSFNQLQTVLSSNFNGLSALKLLDIQNNQISSISSGA 301
Query: 434 LKPLKNLRSLTLESCKVTA 452
L L SL+L K+T+
Sbjct: 302 FNGLTALTSLSLNGNKLTS 320
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 166/400 (41%), Gaps = 59/400 (14%)
Query: 105 LSNLTSLSFRR--NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
S L++L F + +NA+ F GL +L +L + G KGL L++L++
Sbjct: 38 FSGLSALQFLQLHHNALLNLPSNVFDGLSSLQQLYVHNNVLSTLGPNTFKGLASLQNLDL 97
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
+ N ++ +G ++L++L + +K+T+ +GL L L L +++
Sbjct: 98 SY-NQLSTLPPDSFNGSSSLQTLSLFSNKITNISSDAFRGLPGLKYLGLFDNQLSSLSEG 156
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
S L L L+L +++ FS + L+ L+L N+I+D L GL+ L++LN
Sbjct: 157 VFSGLSGLQILSLYNNRVTSLPSNAFSGLSVLQELDLNNNQISDISLSAFNGLSGLKTLN 216
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
L+S + GL L+ L+L ++ S + GL+ LE +++SF +
Sbjct: 217 LNSNQLSSLPSNAFFGLSALQQLQLDGNRISSISMDAFDGLSALEELHMSFNQLQTVLSS 276
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD------SGAAYLRN-- 394
GLS+LK L++ QI+ A LT LT L L G ++T G YL +
Sbjct: 277 NFNGLSALKLLDIQNNQISSISSGAFNGLTALTSLSLNGNKLTSIPAGVFDGLQYLESLI 336
Query: 395 ------------------FKNLRSLEICGGGLTD-------------------------- 410
F NL L + LT
Sbjct: 337 LSSNQLECISSNAFASLLFLNLEELYLSYNQLTSLPLGVFNGLSKLVTLTLSNNHVKELP 396
Query: 411 ----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 446
GL+ L LN+ ++ + S L L +L +TLE
Sbjct: 397 AGVFNGLSSLKFLNLGHNELESLPLNLFDGLTSLEQVTLE 436
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 159/352 (45%), Gaps = 35/352 (9%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+SL ++DLS + ++ S+LQ+L F +I++ + RGL L L +
Sbjct: 90 ASLQNLDLSYNQLSTLPPDSFNGSSSLQTLSL-FSNKITNISSDAFRGLPGLKYLGLF-D 147
Query: 117 NAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N +++ F+GL L L L R T + GL L+ L++ N I+D +
Sbjct: 148 NQLSSLSEGVFSGLSGLQILSLYNNRVTSLPSNA--FSGLSVLQELDLN-NNQISDISLS 204
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
+GL+ LK+L ++ ++++ GL L L L+G +++ +D+ L +L L+
Sbjct: 205 AFNGLSGLKTLNLNSNQLSSLPSNAFFGLSALQQLQLDGNRISSISMDAFDGLSALEELH 264
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD-------SCG 287
++ QL F+ + +LK+L++ N+I+ GLT L SL+L+ G
Sbjct: 265 MSFNQLQTVLSSNFNGLSALKLLDIQNNQISSISSGAFNGLTALTSLSLNGNKLTSIPAG 324
Query: 288 IGDEGLVNLTGLC--------------------NLKCLELSDTQVGSSGLRHLSGLTNLE 327
+ D GL L L NL+ L LS Q+ S L +GL+ L
Sbjct: 325 VFD-GLQYLESLILSSNQLECISSNAFASLLFLNLEELYLSYNQLTSLPLGVFNGLSKLV 383
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
++ LS + + GLSSLK LNL ++ L LT L + L
Sbjct: 384 TLTLSNNHVKELPAGVFNGLSSLKFLNLGHNELESLPLNLFDGLTSLEQVTL 435
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 151/338 (44%), Gaps = 40/338 (11%)
Query: 15 VYSRCLTEVSLEAFR-----------DCALQDLCLGQYPGVND-KWMDVIASQGSSLLSV 62
++S +T +S +AFR D L L G + G++ + + + ++ +SL S
Sbjct: 121 LFSNKITNISSDAFRGLPGLKYLGLFDNQLSSLSEGVFSGLSGLQILSLYNNRVTSLPSN 180
Query: 63 DLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQ 122
SG V LQ LD N QISD L GLS L +L+ N +++
Sbjct: 181 AFSGLSV-------------LQELDLN-NNQISDISLSAFNGLSGLKTLNLNSN-QLSSL 225
Query: 123 GMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
AF GL L +L L+ R + I + GL LE L++ + N + +GL+
Sbjct: 226 PSNAFFGLSALQQLQLDGNRISSI--SMDAFDGLSALEELHMSF-NQLQTVLSSNFNGLS 282
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT---AACLDSLSALGSLFYLNLNR 237
LK L I ++++ GL LT L+L G +T A D L L SL L+
Sbjct: 283 ALKLLDIQNNQISSISSGAFNGLTALTSLSLNGNKLTSIPAGVFDGLQYLESLI---LSS 339
Query: 238 CQLSDDGCEKFSKIG--SLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
QL F+ + +L+ L L +N++T L GL+ L +L L + + +
Sbjct: 340 NQLECISSNAFASLLFLNLEELYLSYNQLTSLPLGVFNGLSKLVTLTLSNNHVKELPAGV 399
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
GL +LK L L ++ S L GLT+LE + L +
Sbjct: 400 FNGLSSLKFLNLGHNELESLPLNLFDGLTSLEQVTLEW 437
>gi|302761780|ref|XP_002964312.1| hypothetical protein SELMODRAFT_142102 [Selaginella moellendorffii]
gi|300168041|gb|EFJ34645.1| hypothetical protein SELMODRAFT_142102 [Selaginella moellendorffii]
Length = 603
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 132/467 (28%), Positives = 205/467 (43%), Gaps = 54/467 (11%)
Query: 38 LGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISD 96
L + G + ++ SL+ +DLS S V D GL+ L + ++ L CI+++D
Sbjct: 67 LNRICGFTSTGLRYLSQHCLSLVEMDLSYCSYVEDDGLLGLARLNRIEKLKLTGCIRVTD 126
Query: 97 GGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLI-NLVKLDLERCTRIHGGLVNLKGL 154
GLE L G L +L + AIT G+K A L+ LDL G+ + L
Sbjct: 127 MGLESLAAGCHRLKTLVLKGCVAITDAGIKLVAARSEELMILDLSFTEVTDEGVKYVSEL 186
Query: 155 MKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTL---- 208
L +LN+ CN + D + L +L L +S C V+ GIA L L L L
Sbjct: 187 KALRTLNLMGCNNVGDRALSYLQENCKSLVDLDVSRCQNVSSVGIAALPTLLTLHLCHCS 246
Query: 209 ------------------LNLEGCPVTAACLDSLSALGSLFYLNLNRCQ---LSDDGCEK 247
L L+GC T LD ++A G L+ C+ ++D ++
Sbjct: 247 QVTEDAFLDFEKPNGIQTLRLDGCEFTHDSLDRVAA-GCQELKELSLCKSRGVTDKRIDR 305
Query: 248 -FSKIGSLKVLNLG--FNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCN-L 302
+ LK L+L F+ L + T+++SL L+S + D L + C+ L
Sbjct: 306 LITSCKFLKKLDLTCCFDVTEISLLSIARSSTSIKSLKLESSLMVTDNSLPMVFESCHLL 365
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD-GSLRKLAGLSSLKSLNL-DARQI 360
+ L+++D + +GL + L + L+F ISD G AG L L+L R +
Sbjct: 366 EELDVTDCNLTGAGLEPIGNCVLLRVLKLAFCNISDYGIFFVGAGCHKLMELDLYRCRSV 425
Query: 361 TDTG-LAALTSLTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG------GGLTD-- 410
D G ++ + L L+L + +RI+D+ + L LEI G GLT
Sbjct: 426 GDAGVISVVNGCQDLRVLNLSYCSRISDASMTAIARLSKLSQLEIRGCTLVTSDGLTQVA 485
Query: 411 AGLTGLVSLNVSN-SRITSAG---LRHLKPLKNLRSLTLESCKVTAN 453
AG LV L++ +RI G L HL P +LR + + C +T N
Sbjct: 486 AGCKRLVELDIKRCTRIGDPGLLALEHLCP--DLRQINVSYCPLTNN 530
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 190/442 (42%), Gaps = 69/442 (15%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI 92
L+ L L + D + ++A++ L+ +DLS ++VTD G+ ++ + L++L+ C
Sbjct: 139 LKTLVLKGCVAITDAGIKLVAARSEELMILDLSFTEVTDEGVKYVSELKALRTLNLMGCN 198
Query: 93 QISDGGLEHLR-GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI-HGGLVN 150
+ D L +L+ +L L R +++ G+ A L L+ L L C+++ ++
Sbjct: 199 NVGDRALSYLQENCKSLVDLDVSRCQNVSSVGI---AALPTLLTLHLCHCSQVTEDAFLD 255
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK-VTDSGIAYL----KGLQK 205
+ +++L + C DS + +G LK L + S+ VTD I L K L+K
Sbjct: 256 FEKPNGIQTLRLDGCEFTHDSLDRVAAGCQELKELSLCKSRGVTDKRIDRLITSCKFLKK 315
Query: 206 LTL--------LNLEGCPVTAACLDSLSALGSLFY-----------------LNLNRCQL 240
L L ++L ++ + SL SL L++ C L
Sbjct: 316 LDLTCCFDVTEISLLSIARSSTSIKSLKLESSLMVTDNSLPMVFESCHLLEELDVTDCNL 375
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLTG 298
+ G E L+VL L F I+D + + G L L+L C +GD G++++
Sbjct: 376 TGAGLEPIGNCVLLRVLKLAFCNISDYGIFFVGAGCHKLMELDLYRCRSVGDAGVISV-- 433
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLD- 356
++G +L +NLS+ + ISD S+ +A LS L L +
Sbjct: 434 ---------------------VNGCQDLRVLNLSYCSRISDASMTAIARLSKLSQLEIRG 472
Query: 357 ARQITDTGLAALTS-LTGLTHLDL-FGARITDSGAAYLRNF-KNLRSLEICGGGLTDAGL 413
+T GL + + L LD+ RI D G L + +LR + + LT+ G+
Sbjct: 473 CTLVTSDGLTQVAAGCKRLVELDIKRCTRIGDPGLLALEHLCPDLRQINVSYCPLTNNGM 532
Query: 414 TGLVSLNVSNSRITSAGLRHLK 435
L L + + L HLK
Sbjct: 533 MALAKLGC----MQNMKLVHLK 550
>gi|357150706|ref|XP_003575549.1| PREDICTED: F-box/LRR-repeat protein 3-like [Brachypodium
distachyon]
Length = 666
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 193/438 (44%), Gaps = 77/438 (17%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGS-DVTDSGLIHLKDCSNLQSLDFNF 90
A++ +CL + GV + +D + + L +VDLS D L + L+ L+
Sbjct: 110 AVRQVCLARASGVGWRGLDALVAACPRLEAVDLSHCVGAGDREAAALAAAAGLRELNLEK 169
Query: 91 CIQISDGGLEHLR-GLSNLTSLSFRRNNAITAQGMKAFAGLI-NLVKLDLERCTRIHGGL 148
C+ ++D GL + G L LSF+ I+ G+ L LD+ + L
Sbjct: 170 CLGVTDMGLAKVAVGCPKLEKLSFKWCREISDIGVDLLVKKCRELRNLDISYLEVSNESL 229
Query: 149 VNLKGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYL----KG 202
++ L KLE L++ C CI D ++ LS G +L+S+ +S C VT G+A L
Sbjct: 230 RSISTLEKLEELSMVGCLCIDDKGLELLSRGSNSLQSVDVSRCDHVTSEGLASLIDGHSF 289
Query: 203 LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK----VLN 258
LQKL AA DSL +G F SK+ +LK +L
Sbjct: 290 LQKL----------NAA--DSLHEIGQNF----------------LSKLATLKETLTMLR 321
Query: 259 LGFNEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLTGLC------NLKCLE-LSD 309
L E++ L+ + +G NL + L C G+ DEG+ +L C +L C L+D
Sbjct: 322 LDGFEVSSSLLLAIAEGCNNLVEVGLSKCNGVTDEGISSLVARCGYLRKIDLTCCNLLTD 381
Query: 310 TQVGS---------------------SGLRHLSG-LTNLESINLSFTGISDGSLRKLAGL 347
+ S GL ++ NL I+L+ G++D +L+ LA
Sbjct: 382 NALVSIADNCKMLECLLLESCSSLSEKGLERIATCCPNLSEIDLTDCGVNDAALQHLAKC 441
Query: 348 SSLKSLNLD-ARQITDTGLAALTS-LTGLTHLDLFGAR-ITDSGAAYL-RNFKNLRSLEI 403
S L L L I+D GL ++S LT +DL+ ITD G A L + K ++ L +
Sbjct: 442 SELLILKLGLCSSISDKGLGFISSKCVKLTEVDLYRCNSITDDGLATLAKGCKKIKMLNL 501
Query: 404 CG-GGLTDAGLTGLVSLN 420
C +TD GL+ L SL
Sbjct: 502 CYCNKITDGGLSHLGSLE 519
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 126/309 (40%), Gaps = 81/309 (26%)
Query: 47 KWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRG-L 105
K ++ IA+ +L +DL+ V D+ L HL CS L L C ISD GL +
Sbjct: 408 KGLERIATCCPNLSEIDLTDCGVNDAALQHLAKCSELLILKLGLCSSISDKGLGFISSKC 467
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC 165
LT + R N+IT G+ A KG K++ LN+ +C
Sbjct: 468 VKLTEVDLYRCNSITDDGLATLA-----------------------KGCKKIKMLNLCYC 504
Query: 166 NCITDSDMKPLSGLTNLKSLQISC-SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
N ITD + L L L +L++ C ++T GI+ V C
Sbjct: 505 NKITDGGLSHLGSLEELTNLELRCLVRITGIGIS----------------SVAIGC---- 544
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
SL ++L RC DD S + +L L NL L +
Sbjct: 545 ---KSLVEIDLKRCYSVDD-----SGLWALARYAL-----------------NLRQLTIS 579
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
C + GL +L L +L+CL+ D + + HLS ++ +E ++ G L+KL
Sbjct: 580 YCQVTGLGLCHL--LSSLRCLQ--DVK-----MVHLSWVS-IEGFEMALRAAC-GRLKKL 628
Query: 345 AGLSSLKSL 353
LSSLKS+
Sbjct: 629 KMLSSLKSV 637
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 197/445 (44%), Gaps = 96/445 (21%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL- 102
++D +D++ + L ++D+S +V++ L + L+ L C+ I D GLE L
Sbjct: 199 ISDIGVDLLVKKCRELRNLDISYLEVSNESLRSISTLEKLEELSMVGCLCIDDKGLELLS 258
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
RG ++L S+ R + +T++G+ A LI+ G L+ L +SL+
Sbjct: 259 RGSNSLQSVDVSRCDHVTSEGL---ASLID--------------GHSFLQKLNAADSLH- 300
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
+ LS L LK + LT+L L+G V+++ L
Sbjct: 301 -------EIGQNFLSKLATLK--------------------ETLTMLRLDGFEVSSSLLL 333
Query: 223 SLS-ALGSLFYLNLNRCQ-LSDDGCEKF-SKIGSLKVLNLG-FNEITDECLVHLKGLTNL 278
+++ +L + L++C ++D+G ++ G L+ ++L N +TD LV +
Sbjct: 334 AIAEGCNNLVEVGLSKCNGVTDEGISSLVARCGYLRKIDLTCCNLLTDNALVSIA----- 388
Query: 279 ESLNLDSCGI------------GDEGLVNLTGLC-NLKCLELSDTQVGSSGLRHLSGLTN 325
D+C + ++GL + C NL ++L+D V + L+HL+ +
Sbjct: 389 -----DNCKMLECLLLESCSSLSEKGLERIATCCPNLSEIDLTDCGVNDAALQHLAKCSE 443
Query: 326 LESINLSF-TGISDGSLRKLAGLSSLKSLNLD------ARQITDTGLAALTS-LTGLTHL 377
L + L + ISD L G S K + L ITD GLA L + L
Sbjct: 444 LLILKLGLCSSISDKGL----GFISSKCVKLTEVDLYRCNSITDDGLATLAKGCKKIKML 499
Query: 378 DL-FGARITDSGAAYLRNFKNLRSLE------ICGGGLTDA--GLTGLVSLNVSNSR-IT 427
+L + +ITD G ++L + + L +LE I G G++ G LV +++ +
Sbjct: 500 NLCYCNKITDGGLSHLGSLEELTNLELRCLVRITGIGISSVAIGCKSLVEIDLKRCYSVD 559
Query: 428 SAGLRHLKPLK-NLRSLTLESCKVT 451
+GL L NLR LT+ C+VT
Sbjct: 560 DSGLWALARYALNLRQLTISYCQVT 584
>gi|428315480|ref|YP_007113362.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
gi|428239160|gb|AFZ04946.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
Length = 471
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 162/336 (48%), Gaps = 43/336 (12%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE----RCTRIHGGL 148
+ISD + L+ L+NLT LS N +K L NL LDL + +I L
Sbjct: 147 RISD--ITPLKFLTNLTELSIWYNQVSNIYPLK---NLTNLSVLDLSLNPLKDIKILENL 201
Query: 149 VNLK--GLMKLESLNI---KWCNCITD--------SDMKPLSGLTNLKSLQISCSKVTDS 195
NL GL+ + NI K+ +T SD+ PL L L L IS ++++D
Sbjct: 202 RNLNTLGLVDNQVSNINHLKYLTSLTHLSLGTNQISDISPLKYLNQLTELGISRNQISD- 260
Query: 196 GIAYLKGLQKLTLLNLEGCPVT-AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSL 254
I+ LK L KLT L L V+ L L+ L +L+ LNR ++SD K + +L
Sbjct: 261 -ISPLKHLSKLTELFLNNNKVSDITPLQFLTNLNTLW---LNRNRVSDISTLKL--LANL 314
Query: 255 KVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS 314
L L N+I D + L+ LTNL+ ++L + I D + + NL L L++ Q+
Sbjct: 315 NTLYLINNQIYD--ISPLRYLTNLKQVDLTNNKIFD---LRMLDSINLTSLYLTNNQI-- 367
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 374
+ L + L+ ++L+ ISD S L L+ L L L QI+D ++ L SL L
Sbjct: 368 EDVSSLKFMKTLKVLSLADNKISDIS--PLKSLTKLTELYLSENQISD--VSPLKSLIKL 423
Query: 375 THLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
T LDL RI+D + L+ NL L + G LT+
Sbjct: 424 TRLDLANNRISD--ISMLKPLTNLLELYLEGNPLTN 457
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 142/299 (47%), Gaps = 43/299 (14%)
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
+D+ PLS LTNL L +S +K++D S+L +L
Sbjct: 105 TDISPLSSLTNLTKLSLSANKISDISSL--------------------------SSLTNL 138
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L L+R ++SD KF + +L L++ +N++++ + LK LTNL L+L + D
Sbjct: 139 TILQLDRNRISDITPLKF--LTNLTELSIWYNQVSN--IYPLKNLTNLSVLDLSLNPLKD 194
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
+ L L NL L L D QV S + HL LT+L ++L ISD S L L+ L
Sbjct: 195 IKI--LENLRNLNTLGLVDNQV--SNINHLKYLTSLTHLSLGTNQISDIS--PLKYLNQL 248
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
L + QI+D ++ L L+ LT L L +++D L+ NL +L + ++D
Sbjct: 249 TELGISRNQISD--ISPLKHLSKLTELFLNNNKVSDITP--LQFLTNLNTLWLNRNRVSD 304
Query: 411 AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSF 469
L++ N++ + + + + PL+ L + L+ +T N I L+ D NL S
Sbjct: 305 ISTLKLLA-NLNTLYLINNQIYDISPLRYLTN--LKQVDLTNNKIFDLRMLDSINLTSL 360
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 153/337 (45%), Gaps = 53/337 (15%)
Query: 63 DLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQ 122
+LS D++ + L +K NL++L+ + + HL+ L++LT LS N
Sbjct: 181 NLSVLDLSLNPLKDIKILENLRNLNTLGLVDNQVSNINHLKYLTSLTHLSLGTNQISDIS 240
Query: 123 GMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNL 182
+K L +L + R +I + LK L KL L + N SD+ PL LTNL
Sbjct: 241 PLKYLNQ---LTELGISR-NQI-SDISPLKHLSKLTEL---FLNNNKVSDITPLQFLTNL 292
Query: 183 KSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
+L ++ ++V+D + L L+ L +L+ +N Q+ D
Sbjct: 293 NTLWLNRNRVSD-----------------------ISTLKLLANLNTLYLIN---NQIYD 326
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD---EGLVNLTGL 299
++ + +LK ++L N+I D L L+S+NL S + + E + +L +
Sbjct: 327 ISPLRY--LTNLKQVDLTNNKIFD--------LRMLDSINLTSLYLTNNQIEDVSSLKFM 376
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 359
LK L L+D ++ S + L LT L + LS ISD S L L L L+L +
Sbjct: 377 KTLKVLSLADNKI--SDISPLKSLTKLTELYLSENQISDVS--PLKSLIKLTRLDLANNR 432
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
I+D ++ L LT L L L G +T+ + +F+
Sbjct: 433 ISD--ISMLKPLTNLLELYLEGNPLTNRNCPLVPDFR 467
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 149/354 (42%), Gaps = 89/354 (25%)
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
SD+ PL LTNL L I ++V S I LK L L++L+L P+ + L L +L
Sbjct: 149 SDITPLKFLTNLTELSIWYNQV--SNIYPLKNLTNLSVLDLSLNPLKDIKI--LENLRNL 204
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L L Q+S+ K+ + SL L+LG N+I+D + LK L L L + I D
Sbjct: 205 NTLGLVDNQVSNINHLKY--LTSLTHLSLGTNQISD--ISPLKYLNQLTELGISRNQISD 260
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
+ L L L L L++ +V S + L LTNL ++ L+ +SD S
Sbjct: 261 --ISPLKHLSKLTELFLNNNKV--SDITPLQFLTNLNTLWLNRNRVSDIS---------- 306
Query: 351 KSLNLDA---------RQITDTGLAALTSLTGLTHLDL-----FGARITDS---GAAYLR 393
+L L A QI D ++ L LT L +DL F R+ DS + YL
Sbjct: 307 -TLKLLANLNTLYLINNQIYD--ISPLRYLTNLKQVDLTNNKIFDLRMLDSINLTSLYLT 363
Query: 394 N-----------FKNLRSLEICGGGLTD--------------------------AGLTGL 416
N K L+ L + ++D L L
Sbjct: 364 NNQIEDVSSLKFMKTLKVLSLADNKISDISPLKSLTKLTELYLSENQISDVSPLKSLIKL 423
Query: 417 VSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFR 470
L+++N+RI+ + LKPL NL L LE +T +R+ P + FR
Sbjct: 424 TRLDLANNRISDISM--LKPLTNLLELYLEGNPLT--------NRNCPLVPDFR 467
>gi|148228501|ref|NP_001083845.1| F-box and leucine-rich repeat protein 14 [Xenopus laevis]
gi|50603939|gb|AAH77430.1| Fbl13 protein [Xenopus laevis]
Length = 400
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 151/303 (49%), Gaps = 50/303 (16%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKP--LSGLTNLKSLQIS-CSKVTDSGIA----YLKGL 203
++GL +ESLN+ C +TD+ + + + +L++L +S C +VTDS + YLKGL
Sbjct: 86 IQGLPNIESLNLSGCYNLTDNGLGHAFVQEIGSLRTLNLSLCKQVTDSSLGRIAQYLKGL 145
Query: 204 QKLTL-----------------------LNLEGC-PVTAACLDSLSALG--------SLF 231
Q L L LNL C V+ + L+ + SL
Sbjct: 146 QVLELGGCTNITNTGLLLIAWGLHGLKSLNLRSCRHVSDVGIGHLAGMTRSAAEGCLSLE 205
Query: 232 YLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-G 287
L L CQ L+D + S+ + L+VLNL F I+D L+HL + L SLNL SC
Sbjct: 206 QLTLQDCQKLTDLALKHISRGLQGLRVLNLSFCGGISDAGLLHLSHMGGLRSLNLRSCDN 265
Query: 288 IGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRHLS-GLTNLESINLSFTGISDGSL-RK 343
I D G+++L G L L++S +VG L +++ GL L+S++L ISD + R
Sbjct: 266 ISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLYGLKSLSLCSCHISDDGINRM 325
Query: 344 LAGLSSLKSLNL-DARQITDTGLAALTS-LTGLTHLDLFG-ARITDSGAAYLRNFKNLRS 400
+ + L++LN+ +ITD GL + L+ LT +DL+G RIT G + L+
Sbjct: 326 VRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKKGLERITQLPCLKV 385
Query: 401 LEI 403
L +
Sbjct: 386 LNL 388
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 142/286 (49%), Gaps = 33/286 (11%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEH 101
V D + IA L ++L G +++T++GL+ + L+SL+ C +SD G+ H
Sbjct: 130 VTDSSLGRIAQYLKGLQVLELGGCTNITNTGLLLIAWGLHGLKSLNLRSCRHVSDVGIGH 189
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNL-KGLMKLES 159
L G++ A G ++L +L L+ C ++ L ++ +GL L
Sbjct: 190 LAGMTR-----------------SAAEGCLSLEQLTLQDCQKLTDLALKHISRGLQGLRV 232
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEGCPVT 217
LN+ +C I+D+ + LS + L+SL + SC ++D+GI +L G +L+ L++ C
Sbjct: 233 LNLSFCGGISDAGLLHLSHMGGLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKV 292
Query: 218 AACLDSLSALGSLFY----LNLNRCQLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVH 271
SL+ + Y L+L C +SDDG + + + L+ LN+G ITD+ L
Sbjct: 293 GD--QSLAYIAQGLYGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLEL 350
Query: 272 L-KGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQVGSS 315
+ + L+ L ++L C I +GL +T L LK L L Q+ S
Sbjct: 351 IAEHLSQLTGIDLYGCTRITKKGLERITQLPCLKVLNLGLWQMTES 396
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 92/198 (46%), Gaps = 41/198 (20%)
Query: 272 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 322
++GL N+ESLNL C G+G + + L L C +++D+ +G ++L G
Sbjct: 86 IQGLPNIESLNLSGCYNLTDNGLGHAFVQEIGSLRTLNLSLCKQVTDSSLGRIA-QYLKG 144
Query: 323 LTNLE---SINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLD 378
L LE N++ TG+ L GL LKSLNL + R ++D G+ L +T
Sbjct: 145 LQVLELGGCTNITNTGL----LLIAWGLHGLKSLNLRSCRHVSDVGIGHLAGMT------ 194
Query: 379 LFGARITDSGAAYLRNFKNLRSLEICGGGLTD-------AGLTGLVSLNVSN-SRITSAG 430
R G L +L+ C LTD GL GL LN+S I+ AG
Sbjct: 195 ----RSAAEGCLSLEQL----TLQDCQK-LTDLALKHISRGLQGLRVLNLSFCGGISDAG 245
Query: 431 LRHLKPLKNLRSLTLESC 448
L HL + LRSL L SC
Sbjct: 246 LLHLSHMGGLRSLNLRSC 263
>gi|241575665|ref|XP_002403227.1| F-box/LRR-repeat protein, putative [Ixodes scapularis]
gi|215502182|gb|EEC11676.1| F-box/LRR-repeat protein, putative [Ixodes scapularis]
Length = 411
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 145/313 (46%), Gaps = 51/313 (16%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLK-DCSNLQSLDFN 89
+L +L L + D + IA L +DL G S+V+++GL+ + NL+SL+
Sbjct: 123 SLSELNLSMCKQITDNSLGRIAQHLKGLERLDLGGCSNVSNTGLLLVAWGLKNLRSLNLR 182
Query: 90 FCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLV 149
C +SD G+ HL G++ +A G + L L L+ C ++ +
Sbjct: 183 SCRGVSDPGIGHLAGMTP-----------------EAAHGTLRLEALCLQDCQKLTDDAL 225
Query: 150 NLK--GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYL-KGLQK 205
GL L SLN+ +C +TD+ +K + + L+ L + SC ++D G+AYL +G +
Sbjct: 226 RFVSLGLADLRSLNLSFCASVTDAGLKHAARMPRLRELNLRSCDNISDLGLAYLAEGGSR 285
Query: 206 LTLLNLEGCPVTA--ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNE 263
L L++ C L + L L L+LN C +SDDG + +
Sbjct: 286 LCALDVSFCDKVGDQGLLHASQGLFQLRSLSLNACPVSDDGIGRVA-------------- 331
Query: 264 ITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHL 320
+ L +L +L+L CG + D+GL + L L+C++L T++ + GL L
Sbjct: 332 ---------RSLGDLHTLHLGQCGRVTDKGLSLIADHLKQLRCIDLYGCTKITTVGLERL 382
Query: 321 SGLTNLESINLSF 333
L +L +NL
Sbjct: 383 MQLPHLGVLNLGL 395
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 157/350 (44%), Gaps = 86/350 (24%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKP--LSGLTNLKSLQIS-CSKVTDSGIA----YLKGL 203
++G+ LE+LN+ C +TD+ + + + +L L +S C ++TD+ + +LKGL
Sbjct: 91 IQGVPNLEALNMIGCFNLTDTWLSHAFVQDVHSLSELNLSMCKQITDNSLGRIAQHLKGL 150
Query: 204 QKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNE 263
++L L GC S G L V
Sbjct: 151 ERLDL----------------------------------GGCSNVSNTGLLLV------- 169
Query: 264 ITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLC--------NLKCLELSDTQ-VG 313
GL NL SLNL SC G+ D G+ +L G+ L+ L L D Q +
Sbjct: 170 --------AWGLKNLRSLNLRSCRGVSDPGIGHLAGMTPEAAHGTLRLEALCLQDCQKLT 221
Query: 314 SSGLRHLS-GLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTS 370
LR +S GL +L S+NLSF ++D L+ A + L+ LNL + I+D GLA L
Sbjct: 222 DDALRFVSLGLADLRSLNLSFCASVTDAGLKHAARMPRLRELNLRSCDNISDLGLAYLAE 281
Query: 371 -LTGLTHLDL-FGARITDSGAAYL-RNFKNLRSLEICGGGLTDAGLTGLVSLNVSN---- 423
+ L LD+ F ++ D G + + LRSL + ++D G+ G V+ ++ +
Sbjct: 282 GGSRLCALDVSFCDKVGDQGLLHASQGLFQLRSLSLNACPVSDDGI-GRVARSLGDLHTL 340
Query: 424 -----SRITSAGLRHLK-PLKNLRSLTLESC-KVTANDIKRLQSRDLPNL 466
R+T GL + LK LR + L C K+T ++RL LP+L
Sbjct: 341 HLGQCGRVTDKGLSLIADHLKQLRCIDLYGCTKITTVGLERLMQ--LPHL 388
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 6/165 (3%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLE 139
++L+SL+ +FC ++D GL+H + L L+ R + I+ G+ A G L LD+
Sbjct: 233 ADLRSLNLSFCASVTDAGLKHAARMPRLRELNLRSCDNISDLGLAYLAEGGSRLCALDVS 292
Query: 140 RCTRI--HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSG 196
C ++ G L +GL +L SL++ C D + L +L +L + C +VTD G
Sbjct: 293 FCDKVGDQGLLHASQGLFQLRSLSLNACPVSDDGIGRVARSLGDLHTLHLGQCGRVTDKG 352
Query: 197 IAYLK-GLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRCQ 239
++ + L++L ++L GC +T L+ L L L LNL Q
Sbjct: 353 LSLIADHLKQLRCIDLYGCTKITTVGLERLMQLPHLGVLNLGLWQ 397
>gi|340057619|emb|CCC51965.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 872
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 162/339 (47%), Gaps = 37/339 (10%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD GL+ ++ C++LQ L + C+++ + L L L +L+ RN + ++G K A
Sbjct: 289 ITDEGLLPVRKCTSLQHLTLDNCVRLR--SINCLGSLHRLHTLTVSRNR-MPSEGFKGLA 345
Query: 129 GLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
L L L RI L ++ G+ L L++ N +TD L+ + L+ L+++
Sbjct: 346 NLRGLEVLRFAVLNRILT-LESIAGIQCLRELDLTD-NWLTDEGCAFLAHCSQLEHLKLA 403
Query: 189 -CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEK 247
C V+D + +++ L L L+L V LDSL + SL L+L C+
Sbjct: 404 YCRSVSD--VRWVRALTSLQTLDLSYTSVLNCFLDSLRSCSSLEELSLAYCK-------- 453
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL 307
V+++ F + GL L+SL++ + + GL ++ L L L
Sbjct: 454 -------DVVDISF----------VVGLNCLKSLDVSGTCVDESGLSSVGKCPALTNLSL 496
Query: 308 SDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLA 366
+ + +GL+ + L L ++N TG+ DG++ + L+ L+ + +TD +
Sbjct: 497 RECR-QVAGLKFVGALKQLINLNAEGTGMLDGNIDHITCCQKLEVLSFRNCPFLTD--VR 553
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
L L GL LDL GA +TD G + L + +L S+++ G
Sbjct: 554 CLKDLGGLKALDLAGAYVTDEGVSTLSHCTSLESIDVSG 592
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 178/438 (40%), Gaps = 102/438 (23%)
Query: 33 LQDLCLGQYPGVND-KWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC 91
L+ L L V+D +W+ + +SL ++DLS + V + L L+ CS+L+ L +C
Sbjct: 397 LEHLKLAYCRSVSDVRWVRAL----TSLQTLDLSYTSVLNCFLDSLRSCSSLEELSLAYC 452
Query: 92 IQISD----------------------GGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAG 129
+ D GL + LT+LS R + G+K
Sbjct: 453 KDVVDISFVVGLNCLKSLDVSGTCVDESGLSSVGKCPALTNLSLRECRQVA--GLKFVGA 510
Query: 130 LINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISC 189
L L+ L+ E + G + ++ KLE L+ + NC +D++ L L LK+L ++
Sbjct: 511 LKQLINLNAEGTGMLDGNIDHITCCQKLEVLSFR--NCPFLTDVRCLKDLGGLKALDLAG 568
Query: 190 SKVTDSGIAYLKGLQKLTLLNLEGC----------------PVTAACLDSLSALGSLFYL 233
+ VTD G++ L L +++ GC V A ++ ++ G L
Sbjct: 569 AYVTDEGVSTLSHCTSLESIDVSGCCLITHFGFLIGLTKLRNVVANGMNVVNVDGLLKSP 628
Query: 234 NLNRCQLSDDGCEKFSKIGSLK-------------VLNLGFNEITDEC-------LVHLK 273
++ R L + + S +G + + N+G N + + C L
Sbjct: 629 SMERVSLVES--RRLSFVGHVAAARLTELSVENSNISNVGINAVLEGCYSLQRLSLQQCP 686
Query: 274 GLTNLESLNL---------DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLT 324
+++L+ ++L S + E + + NL+ L++SD + + L L
Sbjct: 687 AISDLQGVSLLPKLQELLLRSTAVSRESVAQIAACENLRRLQISDC-ADVTDVNILCSLQ 745
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNL-DAR----------------------QIT 361
+L ++LS T ++ G ++ LA S+LK LNL D R +T
Sbjct: 746 SLVDLDLSKTNVTTGGVKGLAQCSALKKLNLSDCRFVTNINCLGKLPVLRELYLCRTSVT 805
Query: 362 DTGLAALTSLTGLTHLDL 379
D G+A L L L L
Sbjct: 806 DRGIAGLQHCRQLETLTL 823
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 50/272 (18%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L ++DL+G+ VTD G+ L C++L+S+D + C I+ G L GL+ L ++ N
Sbjct: 561 LKALDLAGAYVTDEGVSTLSHCTSLESIDVSGCCLITHFGF--LIGLTKLRNVVANGMNV 618
Query: 119 ITAQGM----------------KAFAGLI---NLVKLDLERCTRIHGGL-VNLKGLMKLE 158
+ G+ +F G + L +L +E + G+ L+G L+
Sbjct: 619 VNVDGLLKSPSMERVSLVESRRLSFVGHVAAARLTELSVENSNISNVGINAVLEGCYSLQ 678
Query: 159 SLNIKWCNCITD----------------------SDMKPLSGLTNLKSLQIS-CSKVTDS 195
L+++ C I+D + ++ NL+ LQIS C+ VTD
Sbjct: 679 RLSLQQCPAISDLQGVSLLPKLQELLLRSTAVSRESVAQIAACENLRRLQISDCADVTDV 738
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSL 254
I L LQ L L+L VT + L+ +L LNL+ C+ +++ C K+ L
Sbjct: 739 NI--LCSLQSLVDLDLSKTNVTTGGVKGLAQCSALKKLNLSDCRFVTNINC--LGKLPVL 794
Query: 255 KVLNLGFNEITDECLVHLKGLTNLESLNLDSC 286
+ L L +TD + L+ LE+L L C
Sbjct: 795 RELYLCRTSVTDRGIAGLQHCRQLETLTLTKC 826
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 145/328 (44%), Gaps = 36/328 (10%)
Query: 156 KLESLNIKWCNCITDSDMKPLSG-LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC 214
K+ESL+++ C T+ + ++ L+N + S SG L L L L L
Sbjct: 181 KVESLDLRQCYGETEMRLCSVTSILSNRLVRRHGLSTFYLSGTTALGVLTHLHSLELHSV 240
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
P++ + S SL +L ++ C+ L+ C + I L L+L + ITDE L+ ++
Sbjct: 241 PLSNELMLYFSQCLSLRHLIIDSCRGLASLEC--LTAIPGLLNLSLLNSPITDEGLLPVR 298
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF 333
T+L+ L LD+C + + L L L L +S ++ S G + L+ L LE + +
Sbjct: 299 KCTSLQHLTLDNC-VRLRSINCLGSLHRLHTLTVSRNRMPSEGFKGLANLRGLEVLRFAV 357
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
+L +AG+ L+ L+L +TD G A L + L HL L R + S ++R
Sbjct: 358 LN-RILTLESIAGIQCLRELDLTDNWLTDEGCAFLAHCSQLEHLKLAYCR-SVSDVRWVR 415
Query: 394 NFKNLRSLEICGGGLTD-----------------------------AGLTGLVSLNVSNS 424
+L++L++ + + GL L SL+VS +
Sbjct: 416 ALTSLQTLDLSYTSVLNCFLDSLRSCSSLEELSLAYCKDVVDISFVVGLNCLKSLDVSGT 475
Query: 425 RITSAGLRHLKPLKNLRSLTLESCKVTA 452
+ +GL + L +L+L C+ A
Sbjct: 476 CVDESGLSSVGKCPALTNLSLRECRQVA 503
>gi|345480032|ref|XP_003424075.1| PREDICTED: F-box/LRR-repeat protein 14-like [Nasonia vitripennis]
Length = 567
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 156/320 (48%), Gaps = 56/320 (17%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
+ L SL+ + C +SD G+ N+A++ + F+ +L +L
Sbjct: 260 FRGIPKLHSLNLSGCFNMSDAGI----------------NSALS----QPFS---SLTQL 296
Query: 137 DLERCTRIHGGLVN--LKGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQI-SCSKV 192
+L C I + + L LE+L++ C IT+S + ++ GL +L+ L + SC V
Sbjct: 297 NLSYCKHITDASLGKIAQCLKNLETLDLGGCTNITNSGLHVIAWGLKSLRRLDVKSCWHV 356
Query: 193 TDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKI 251
+D GI YL G+ NL +L +L L Q L+D+G S +
Sbjct: 357 SDQGIGYLAGINSDAGGNL-----------------ALEHLGLQDVQRLTDEGLRSIS-L 398
Query: 252 G---SLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT-GLCNLKCLE 306
G SL+ +NL F +ITD + H+ +T+L L+L +C I + + NL G + L+
Sbjct: 399 GLATSLQSINLSFCVQITDNGMKHIAKITSLRELDLRNCDISESAMANLAEGGSRISSLD 458
Query: 307 LSD-TQVGSSGLRHLS-GLTNLESINLSFTGISDGSLRKLAGLSS-LKSLNL-DARQITD 362
+S +VG L+H+S GL NL+S+ LS ISD + K+A L++L + ++TD
Sbjct: 459 VSFCDKVGDQALQHISQGLFNLKSLGLSACPISDEGIDKIAKTQQDLETLLIGQCSRLTD 518
Query: 363 TG-LAALTSLTGLTHLDLFG 381
L + S+ L +DL+G
Sbjct: 519 KSILTIVESMPRLRSIDLYG 538
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 152/315 (48%), Gaps = 61/315 (19%)
Query: 57 SSLLSVDLSG-SDVTDSGLIHLKDC-SNLQSLDFNFCIQISDGGLEHLR-GLSNLTSLSF 113
SSL ++LS +TD+ L + C NL++LD C I++ GL + GL +L L
Sbjct: 291 SSLTQLNLSYCKHITDASLGKIAQCLKNLETLDLGGCTNITNSGLHVIAWGLKSLRRLDV 350
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
+ ++ QG+ AG+ + + G + LE L ++ +TD +
Sbjct: 351 KSCWHVSDQGIGYLAGINS-----------------DAGGNLALEHLGLQDVQRLTDEGL 393
Query: 174 KPLS-GL-TNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
+ +S GL T+L+S+ +S C ++TD+G+ ++ + L L+L C ++ + + +L+ G
Sbjct: 394 RSISLGLATSLQSINLSFCVQITDNGMKHIAKITSLRELDLRNCDISESAMANLAEGG-- 451
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDSCGI 288
S+I SL V F +++ D+ L H+ +GL NL+SL L +C I
Sbjct: 452 ------------------SRISSLDV---SFCDKVGDQALQHISQGLFNLKSLGLSACPI 490
Query: 289 GDEGL-------VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL-SFTGISDGS 340
DEG+ +L L +C L+D + L + + L SI+L T IS S
Sbjct: 491 SDEGIDKIAKTQQDLETLLIGQCSRLTDKSI----LTIVESMPRLRSIDLYGCTKISKFS 546
Query: 341 LRKLAGLSSLKSLNL 355
L K+ L L SLNL
Sbjct: 547 LEKILKL-PLISLNL 560
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 133/279 (47%), Gaps = 60/279 (21%)
Query: 200 LKGLQKLTLLNLEGC-PVTAACLDSL--SALGSLFYLNLNRCQ-LSDDGCEKFSK-IGSL 254
+G+ KL LNL GC ++ A ++S SL LNL+ C+ ++D K ++ + +L
Sbjct: 260 FRGIPKLHSLNLSGCFNMSDAGINSALSQPFSSLTQLNLSYCKHITDASLGKIAQCLKNL 319
Query: 255 KVLNLG-FNEITDECL-VHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCN-------LKC 304
+ L+LG IT+ L V GL +L L++ SC + D+G+ L G+ + L+
Sbjct: 320 ETLDLGGCTNITNSGLHVIAWGLKSLRRLDVKSCWHVSDQGIGYLAGINSDAGGNLALEH 379
Query: 305 LELSDTQ-VGSSGLRHLS-GL-TNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
L L D Q + GLR +S GL T+L+SINLSF QIT
Sbjct: 380 LGLQDVQRLTDEGLRSISLGLATSLQSINLSF-----------------------CVQIT 416
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNV 421
D G+ + +T L LDL I++S A L G + + SL+V
Sbjct: 417 DNGMKHIAKITSLRELDLRNCDISESAMANLAE-----------------GGSRISSLDV 459
Query: 422 SN-SRITSAGLRHL-KPLKNLRSLTLESCKVTANDIKRL 458
S ++ L+H+ + L NL+SL L +C ++ I ++
Sbjct: 460 SFCDKVGDQALQHISQGLFNLKSLGLSACPISDEGIDKI 498
>gi|261331843|emb|CBH14837.1| leucine-rich repeat protein (LRRP, pseudogene),putative
[Trypanosoma brucei gambiense DAL972]
Length = 1517
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 153/365 (41%), Gaps = 82/365 (22%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC 91
AL +L L +N W + Q L LS + +TD + H C NL +LD +FC
Sbjct: 624 ALNELNLSDCFEINAGWEALEKLQ--QLHVAILSNTHITDGDISHFSKCKNLVTLDLSFC 681
Query: 92 IQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL 151
++ D + LSN+T+L L+L C++I GL L
Sbjct: 682 DKLLD-----VTALSNITTLE----------------------DLNLSNCSKIRKGLSVL 714
Query: 152 KGLMKLESLNIKWC----------------------NCITDSDMKPLSGLTNLKSLQIS- 188
L +L LN+K NC D+KPLS L L+ L +
Sbjct: 715 GELPRLRVLNVKGVLLEDSVIGSLGNGKSFAKLSLENCKGFGDVKPLSNLVTLEELNLHY 774
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL-SALGSLFYLNLNRCQLSDDGCEK 247
C KVT SG+ L L +L +L+L L+++ ++ L LNL+ C+
Sbjct: 775 CDKVT-SGMGTLGSLPQLRVLDLGRTQADNNSLENICTSSIPLVLLNLSHCK-------- 825
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL 307
KI S+ + LT LE LN+D+C G L L+ L
Sbjct: 826 --KITSIST---------------IASLTALEELNIDNCCNVTSGWNVFGTLHQLRVATL 868
Query: 308 SDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDARQITDTGLA 366
S+T++ +R++S +L ++NL+F I+D + L+ ++ L+ LNLD G+
Sbjct: 869 SNTRINDENIRYVSECKSLNTLNLAFCKDITD--VTALSKITMLEELNLDCCHNIRKGIE 926
Query: 367 ALTSL 371
L L
Sbjct: 927 TLGKL 931
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 205/492 (41%), Gaps = 80/492 (16%)
Query: 37 CLGQYPGVNDKWMDVIA------SQGSSLLSVDLSGSD-VTDSGLIHLKDCSNLQSLDFN 89
CL + +N K+ D+ S+ SL S++LS VTD + L S L+ L+ +
Sbjct: 1038 CLPRLRVLNLKYTDINGDVTKNISESKSLRSLNLSHCKWVTDISV--LSSLSTLEELNIS 1095
Query: 90 FCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLV 149
C QI G E L L L ++ + ITA+ + + LVKL RC + V
Sbjct: 1096 ECEQIRKGW-ESLGKLP-LLRVAILSDTKITAKDIVCLSSCKTLVKLKFFRCEELSDVTV 1153
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCS-KVTDSGIAYLKGLQKLTL 208
K + LE L +K C+ +K L+ L L+ S K + + G L L
Sbjct: 1154 VYK-IQSLEELIVKNCS----DGLKGLNAPGTLPRLRFFASAKCERMLLVHSHGCVFLLL 1208
Query: 209 LNLEGCPVTAACLDS--------------------LSALGSLFYLNLNRCQLSDDGCEKF 248
N+ G ++ + + LS + SL L+L C + G
Sbjct: 1209 RNVRGSDISVESIGTSKSLVRLTIEVGEDLTDTTPLSDITSLEELSLRECGDNLGGVGTL 1268
Query: 249 SKIGSLKVLNLGFNEIT-----DECLV------------------HLKGLTNLESLNLDS 285
K+ LK L+LG ++I+ D CL H+ LT LE LNL
Sbjct: 1269 EKLPRLKSLDLGLSDISNSTLNDICLSRSITSLNLSNNYELTDISHISNLTALEELNLRG 1328
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSS-GLRHLSGLTNLESINLSFTGISDGSLRKL 344
C G L+ L L+ L L +V + ++S +L ++N+ + ++D S +
Sbjct: 1329 CYHITSGWEALSELPRLRVLNLESARVTTRYDGYYISRCKSLVTLNIQLSDMTDASY--I 1386
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE-- 402
A + +L+ L++ G +AL +L L LDLF +RITD LRN + ++E
Sbjct: 1387 ANIKTLEELHIGECDELRWGFSALFTLPRLRILDLFMSRITDED---LRNIQPPHTIEEL 1443
Query: 403 ---ICGGGLTDAGLTGLVS--------LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
C L D G + L+ R+ G R L L L + +++ V+
Sbjct: 1444 NLSYC-ENLNDITPLGRIKSIKNLHFLLSYDARRLREEGFRSLLELPCLSWVGVKNAYVS 1502
Query: 452 ANDIKRLQSRDL 463
++ ++ L+ R L
Sbjct: 1503 SDILRELRKRRL 1514
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 167/403 (41%), Gaps = 55/403 (13%)
Query: 81 SNLQSLDFN-FCIQIS--DGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLD 137
+++ SLDF C S +E + GLSN ++A A ++ L KL
Sbjct: 515 AHISSLDFTGICASKSLLQLNMESITGLSN----------------VEALANILTLEKLS 558
Query: 138 LERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSG 196
L C I + L +L+ L++ N +S ++ L + SL +S C K+T+
Sbjct: 559 LLGCNGIDAVIGCLGNPPQLKMLDLSGTNTDNES-LRSLCLSQTMVSLNLSHCWKMTN-- 615
Query: 197 IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 256
++++ L+ L LNL C A ++L L L L+ ++D FSK +L
Sbjct: 616 MSHISSLEALNELNLSDCFEINAGWEALEKLQQLHVAILSNTHITDGDISHFSKCKNLVT 675
Query: 257 LNLGF-NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE-----LSDT 310
L+L F +++ D + L +T LE LNL +C +GL L L L+ L L D+
Sbjct: 676 LDLSFCDKLLD--VTALSNITTLEDLNLSNCSKIRKGLSVLGELPRLRVLNVKGVLLEDS 733
Query: 311 QVGSSG------------------LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
+GS G ++ LS L LE +NL + + L L L+
Sbjct: 734 VIGSLGNGKSFAKLSLENCKGFGDVKPLSNLVTLEELNLHYCDKVTSGMGTLGSLPQLRV 793
Query: 353 LNLDARQITDTGLAALTS------LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG 406
L+L Q + L + + L L+H + T + L + G
Sbjct: 794 LDLGRTQADNNSLENICTSSIPLVLLNLSHCKKITSISTIASLTALEELNIDNCCNVTSG 853
Query: 407 GLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
L L +SN+RI +R++ K+L +L L CK
Sbjct: 854 WNVFGTLHQLRVATLSNTRINDENIRYVSECKSLNTLNLAFCK 896
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 195/468 (41%), Gaps = 70/468 (14%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISD-------GGLEHL---------RGL 105
+DLSG+ V D+ L L DC +L+ L+ ++CIQ++D E L RG+
Sbjct: 353 LDLSGAPVEDNFLKDLCDCGSLERLNLSYCIQLTDINPLSNAAATEELNLNGCRRITRGM 412
Query: 106 SNLTSLS-----FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL 160
+ L ++ ++ + + LVK+ L+ C G + L ++ LE L
Sbjct: 413 GVVWVLPKLRVLHMKDMHLSEPSLDSVGTGGPLVKVSLDNCAGF-GDMTLLSSIVTLEEL 471
Query: 161 NIK----------------------WCNC-----------ITDSDMKPL--SGLTNLKS- 184
NI+ WC I ++ + L +G+ KS
Sbjct: 472 NIQKCVDIISGVGCLGTLPYLVYLTWCGLPWYTTVPRVLNIKEAHISSLDFTGICASKSL 531
Query: 185 LQISCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
LQ++ +T S + L + L L+L GC A + L L L+L+ ++
Sbjct: 532 LQLNMESITGLSNVEALANILTLEKLSLLGCNGIDAVIGCLGNPPQLKMLDLSGTNTDNE 591
Query: 244 GCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNL 302
++ LNL ++T+ + H+ L L LNL C + G L L L
Sbjct: 592 SLRSLCLSQTMVSLNLSHCWKMTN--MSHISSLEALNELNLSDCFEINAGWEALEKLQQL 649
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDARQIT 361
LS+T + + H S NL +++LSF + D + L+ +++L+ LNL
Sbjct: 650 HVAILSNTHITDGDISHFSKCKNLVTLDLSFCDKLLD--VTALSNITTLEDLNLSNCSKI 707
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR--SLEICGGGLTDAGLTGLVS- 418
GL+ L L L L++ G + DS L N K+ SLE C G L+ LV+
Sbjct: 708 RKGLSVLGELPRLRVLNVKGVLLEDSVIGSLGNGKSFAKLSLENCKGFGDVKPLSNLVTL 767
Query: 419 --LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLP 464
LN+ ++G+ L L LR L L + N ++ + + +P
Sbjct: 768 EELNLHYCDKVTSGMGTLGSLPQLRVLDLGRTQADNNSLENICTSSIP 815
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 171/401 (42%), Gaps = 55/401 (13%)
Query: 94 ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG 153
+ + G HL + L L + + ++ + L NL L+L + +
Sbjct: 242 VDNNGARHLFNIGTLEELVIA--DTMQLANIRGISRLTNLKCLELNSTDIDDSCVRRICA 299
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLE 212
+KL L++ CN I D+ P+S L L+ L + SC +T GI L L +L +L+L
Sbjct: 300 CVKLFKLSVSECNNIMDA--TPISQLAALEELNLNSCYHIT-KGIGTLGMLLRLRVLDLS 356
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRC-QLSD---------------DGCEKFSK------ 250
G PV L L GSL LNL+ C QL+D +GC + ++
Sbjct: 357 GAPVEDNFLKDLCDCGSLERLNLSYCIQLTDINPLSNAAATEELNLNGCRRITRGMGVVW 416
Query: 251 -IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGD----EGLVNLTGLCNLKC 304
+ L+VL++ +++ L + L ++LD+C G GD +V L L KC
Sbjct: 417 VLPKLRVLHMKDMHLSEPSLDSVGTGGPLVKVSLDNCAGFGDMTLLSSIVTLEELNIQKC 476
Query: 305 LELSDTQVGSSG-LRHLSGLTNL---------ESINLSFTGISDGSLRKLAGLSSLKSLN 354
+++ + VG G L +L LT +N+ IS + SL LN
Sbjct: 477 VDII-SGVGCLGTLPYLVYLTWCGLPWYTTVPRVLNIKEAHISSLDFTGICASKSLLQLN 535
Query: 355 LDARQITD-TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL 413
+++ IT + + AL ++ L L L G D+ L N L+ L++ G + L
Sbjct: 536 MES--ITGLSNVEALANILTLEKLSLLGCNGIDAVIGCLGNPPQLKMLDLSGTNTDNESL 593
Query: 414 TGL------VSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
L VSLN+S+ + H+ L+ L L L C
Sbjct: 594 RSLCLSQTMVSLNLSHC-WKMTNMSHISSLEALNELNLSDC 633
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 120/266 (45%), Gaps = 29/266 (10%)
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV 216
L +LN+ +C ITD + LS +T L+ L + C GI L L K +L+++ C +
Sbjct: 887 LNTLNLAFCKDITD--VTALSKITMLEELNLDCCHNIRKGIETLGKLPKARILSMKECYM 944
Query: 217 TAACLDSLSALGSLFYLNLNRC----------QLSDDG-CEKFSKIGSLKVLNLGFNEIT 265
+++ +LG + +LN + L DG ++ S +G+ K L + N
Sbjct: 945 ETDMRNNVPSLGIVSHLNSWKASQGTYPKHEGMLHGDGYAQQCSILGNSKSL-VKLNLER 1003
Query: 266 DECLVHLKGLTN---LESLNLDS----CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
+ +K L+N LE L LD C I + + L L+ L L T + +
Sbjct: 1004 SMGFISVKALSNIATLEELVLDHAQEVCCIP-----SFSCLPRLRVLNLKYTDINGDVTK 1058
Query: 319 HLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
++S +L S+NLS ++D S+ L+ LS+L+ LN+ + G +L L L
Sbjct: 1059 NISESKSLRSLNLSHCKWVTDISV--LSSLSTLEELNISECEQIRKGWESLGKLPLLRVA 1116
Query: 378 DLFGARITDSGAAYLRNFKNLRSLEI 403
L +IT L + K L L+
Sbjct: 1117 ILSDTKITAKDIVCLSSCKTLVKLKF 1142
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 118/506 (23%), Positives = 179/506 (35%), Gaps = 133/506 (26%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISD----------------------GGLEH 101
LS + + D + ++ +C +L +L+ FC I+D G+E
Sbjct: 868 LSNTRINDENIRYVSECKSLNTLNLAFCKDITDVTALSKITMLEELNLDCCHNIRKGIET 927
Query: 102 LRGLSNLTSLSFR--------RNNAIT-----------------------------AQGM 124
L L LS + RNN + AQ
Sbjct: 928 LGKLPKARILSMKECYMETDMRNNVPSLGIVSHLNSWKASQGTYPKHEGMLHGDGYAQQC 987
Query: 125 KAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL------NIKWCNCITDSDMKPLSG 178
+LVKL+LER G +++K L + +L + + CI P
Sbjct: 988 SILGNSKSLVKLNLERSM----GFISVKALSNIATLEELVLDHAQEVCCIPSFSCLPRLR 1043
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+ NLK I+ VT I+ K L+ L NL C + LS+L +L LN++ C
Sbjct: 1044 VLNLKYTDIN-GDVT-KNISESKSLRSL---NLSHCKWVTD-ISVLSSLSTLEELNISEC 1097
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
+ G E K+ L+V L +IT + +V L L L C E L ++T
Sbjct: 1098 EQIRKGWESLGKLPLLRVAILSDTKITAKDIVCLSSCKTLVKLKFFRC----EELSDVTV 1153
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI---------------------- 336
+ ++ LE + S GL+ L+ L + +
Sbjct: 1154 VYKIQSLEELIVKNCSDGLKGLNAPGTLPRLRFFASAKCERMLLVHSHGCVFLLLRNVRG 1213
Query: 337 SDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF 395
SD S+ + SL L ++ +TDT L+ +T L L L G L
Sbjct: 1214 SDISVESIGTSKSLVRLTIEVGEDLTDT--TPLSDITSLEELSLRECGDNLGGVGTLEKL 1271
Query: 396 KNLRSL-------------EIC------------GGGLTD----AGLTGLVSLNVSNSRI 426
L+SL +IC LTD + LT L LN+
Sbjct: 1272 PRLKSLDLGLSDISNSTLNDICLSRSITSLNLSNNYELTDISHISNLTALEELNLRGCYH 1331
Query: 427 TSAGLRHLKPLKNLRSLTLESCKVTA 452
++G L L LR L LES +VT
Sbjct: 1332 ITSGWEALSELPRLRVLNLESARVTT 1357
>gi|238008968|gb|ACR35519.1| unknown [Zea mays]
Length = 520
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 142/483 (29%), Positives = 209/483 (43%), Gaps = 103/483 (21%)
Query: 49 MDVIASQGSSLLSVDLSGSD----VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGL-EHL 102
M V+A L + + GS VTD GL + + NL SL I+D GL E
Sbjct: 31 MAVVAGSCGGLEKLSVRGSHPARGVTDQGLSAVARGSPNLSSLALWDVPLITDAGLVEIA 90
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRI-HGGLVNL-KGLMKLES 159
G L L R IT +G+ AFA G +LV L +E C+ + GL + + MKL++
Sbjct: 91 AGCPLLERLDISRCPLITDKGLAAFAQGCPDLVSLTIEACSSVGDEGLRAIGRSCMKLQA 150
Query: 160 LNIKWCNCITDSDMKPL--SGLTNLKSLQISCSKVTDSGIAYL----------------- 200
+NIK C + D + L S +L +++ +TD+ +A +
Sbjct: 151 VNIKNCPLVGDQGISSLVCSATASLAKIRLQGLNITDASLAVIGYYGKAITDLSLTRLAT 210
Query: 201 ------------KGLQKLTLLNLEGCP-VTAACLDSLSAL-GSLFYLNLNRC-QLSDDGC 245
GLQ L +++ CP VT L S++ SL L L +C +SD G
Sbjct: 211 VGERGFWVMANAAGLQNLRCMSVTSCPGVTDLALASIAKFCPSLKKLYLRKCGHVSDAGL 270
Query: 246 EKFSKIGSLKVL-NLGFNEITDECLVHLKGLTN----LESLNLDSC-GIGDEGLVNLTGL 299
+ F++ S KV NL E LV + N +L+L C GI D V
Sbjct: 271 KAFTE--SAKVFENLQLEECNRVTLVGILAFLNCSQKFRALSLVKCMGIKDICSVPQLPF 328
Query: 300 C-NLKCLELSDTQVGSSGLRHLSGL--TNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
C +L+ L + D ++ + G+ LE ++LS G
Sbjct: 329 CRSLRFLTIKDCPGFTNASLAVVGMICPQLEQVDLSGLG--------------------- 367
Query: 357 ARQITDTGLAAL--TSLTGLTHLDLFGAR-ITDSGAAYL--RNFKNLR--SLEICGGGLT 409
++TD GL L +S +GL +DL G + ITD + L R+ K+L+ SLE C +T
Sbjct: 368 --EVTDNGLLPLIQSSESGLIKVDLSGCKNITDVAVSSLVKRHGKSLKKVSLEGC-SKIT 424
Query: 410 DAGL-------TGLVSLNVSNSRITSAGL------RHLKPLKNLRSLTLESC-KVTANDI 455
DA L T L L++SN ++ G+ RHLK LR L+L C KVT +
Sbjct: 425 DASLFTMSESCTELAELDLSNCMVSDYGVAMLASARHLK----LRVLSLSGCSKVTQKSV 480
Query: 456 KRL 458
L
Sbjct: 481 PFL 483
>gi|386333501|ref|YP_006029671.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
gi|334195950|gb|AEG69135.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
Length = 462
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 139/311 (44%), Gaps = 11/311 (3%)
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
GG+ + L+ L + TD+D++ L L + +T GIA+L L
Sbjct: 114 GGIPSPDDYPALQKLTL--IGPFTDADLQRLPPYLRELDLSLCEGPITAVGIAHLLAL-P 170
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
L L++ GC + A L+ +L LNL R + D G F++ L LN+ N I
Sbjct: 171 LDRLDVSGCGLNADSARLLAGHATLTALNLRRNAIGDAGVAAFARNKKLTTLNVSGNGIG 230
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN 325
+ L T + +L++ IGDEG L L L+ SD +G G + L+ T
Sbjct: 231 PAGVRALAANTTITTLDISDNEIGDEGARALASNAALTRLDASDCGIGPDGTQALATSTT 290
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L S++LS+ I + L ++L++L+ ++ L + T LT L+L I
Sbjct: 291 LTSLDLSYNEIEAEGVEALGRNTTLRTLHACGNELGHREAELLAASTTLTVLNLSSNAIG 350
Query: 386 DSGAAYLRNFKNLRSLEICGGGL------TDAGLTGLVSLNVSNSRITSAGLRHLKPLKN 439
++GA L L + G+ D G L +L++SN+RI A + L +
Sbjct: 351 NAGARAFGANTTLAELNLSNNGIERVPAWADTG--KLTTLDLSNNRIGDAAAQVLAASRT 408
Query: 440 LRSLTLESCKV 450
L +L + S ++
Sbjct: 409 LTTLNVGSNRI 419
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 150/340 (44%), Gaps = 20/340 (5%)
Query: 70 TDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN----AITAQGMK 125
TD+ L L L+ LD + C +G + + G+++L +L R + + A +
Sbjct: 135 TDADLQRLPPY--LRELDLSLC----EGPITAV-GIAHLLALPLDRLDVSGCGLNADSAR 187
Query: 126 AFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
AG L L+L R G+ KL +LN+ N I + ++ L+ T + +L
Sbjct: 188 LLAGHATLTALNLRRNAIGDAGVAAFARNKKLTTLNVS-GNGIGPAGVRALAANTTITTL 246
Query: 186 QISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGC 245
IS +++ D G L LT L+ C + +L+ +L L+L+ ++ +G
Sbjct: 247 DISDNEIGDEGARALASNAALTRLDASDCGIGPDGTQALATSTTLTSLDLSYNEIEAEGV 306
Query: 246 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
E + +L+ L+ NE+ L T L LNL S IG+ G L L
Sbjct: 307 EALGRNTTLRTLHACGNELGHREAELLAASTTLTVLNLSSNAIGNAGARAFGANTTLAEL 366
Query: 306 ELSDTQVGSSGLRHLSGLTN---LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
LS+ +G+ + + L +++LS I D + + LA +L +LN+ + +I D
Sbjct: 367 NLSN-----NGIERVPAWADTGKLTTLDLSNNRIGDAAAQVLAASRTLTTLNVGSNRIGD 421
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
G AL T L LD+ RI +G L L+ LE
Sbjct: 422 AGACALAGNTTLATLDVSLNRIGKAGMLALAANTTLKKLE 461
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 142/330 (43%), Gaps = 58/330 (17%)
Query: 133 LVKLDLERCTRIHGGLVNLKGL-----MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L +LDL C G + G+ + L+ L++ C DS + L+G L +L +
Sbjct: 146 LRELDLSLCE----GPITAVGIAHLLALPLDRLDVSGCGLNADS-ARLLAGHATLTALNL 200
Query: 188 SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA-------------LG------ 228
+ + D+G+A +KLT LN+ G + A + +L+A +G
Sbjct: 201 RRNAIGDAGVAAFARNKKLTTLNVSGNGIGPAGVRALAANTTITTLDISDNEIGDEGARA 260
Query: 229 -----SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
+L L+ + C + DG + + +L L+L +NEI E + L T L +L+
Sbjct: 261 LASNAALTRLDASDCGIGPDGTQALATSTTLTSLDLSYNEIEAEGVEALGRNTTLRTLH- 319
Query: 284 DSCG--IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 341
+CG +G L L L LS +G++G R T L +NLS GI +
Sbjct: 320 -ACGNELGHREAELLAASTTLTVLNLSSNAIGNAGARAFGANTTLAELNLSNNGIE--RV 376
Query: 342 RKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
A L +L+L +I D L + LT L++ RI D+GA L
Sbjct: 377 PAWADTGKLTTLDLSNNRIGDAAAQVLAASRTLTTLNVGSNRIGDAGACAL--------- 427
Query: 402 EICGGGLTDAGLTGLVSLNVSNSRITSAGL 431
AG T L +L+VS +RI AG+
Sbjct: 428 ---------AGNTTLATLDVSLNRIGKAGM 448
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 102/252 (40%), Gaps = 33/252 (13%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+++ ++D+S +++ D G L + L LD + C I G + L + LTSL N
Sbjct: 241 TTITTLDISDNEIGDEGARALASNAALTRLDASDC-GIGPDGTQALATSTTLTSLDLSYN 299
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
I A+G++A N L C N + + + L
Sbjct: 300 E-IEAEGVEALG--RNTTLRTLHAC-----------------------GNELGHREAELL 333
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE--GCPVTAACLDSLSALGSLFYLN 234
+ T L L +S + + ++G L LNL G A D+ G L L+
Sbjct: 334 AASTTLTVLNLSSNAIGNAGARAFGANTTLAELNLSNNGIERVPAWADT----GKLTTLD 389
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
L+ ++ D + + +L LN+G N I D L G T L +L++ IG G++
Sbjct: 390 LSNNRIGDAAAQVLAASRTLTTLNVGSNRIGDAGACALAGNTTLATLDVSLNRIGKAGML 449
Query: 295 NLTGLCNLKCLE 306
L LK LE
Sbjct: 450 ALAANTTLKKLE 461
>gi|384251251|gb|EIE24729.1| RNI-like protein [Coccomyxa subellipsoidea C-169]
Length = 498
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 150/316 (47%), Gaps = 57/316 (18%)
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCS-KVTD---SGIAYLK 201
G V L GL +LE L K C+ ++ + L +LK+ ++CS +++D + IA L+
Sbjct: 127 GFPVMLTGLRQLELLACKGCSGLSSRPFAGIESLVSLKTCLLNCSLRMSDDTCADIASLR 186
Query: 202 GLQKLTLL--NLEGC--P--VTAACLDSLSALGSLFYLNLN-RCQLSDDGCEKFSK-IGS 253
+Q L L LEGC P +T A L SL + L L+L+ +SD + ++ +
Sbjct: 187 QVQTLGLACSALEGCLTPACITHAGLRSLCGMTQLTALDLSGHAAISDASMAEIARHLTR 246
Query: 254 LKVLNL--------GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
L L+L G +TD + L LT LES+ L +G G L L L+CL
Sbjct: 247 LIDLDLRRPACDNPGAAVVTDAGIAALASLTLLESVRLSQAQVGQAGCAALASLPRLRCL 306
Query: 306 E------LSDTQVGS-SGLRHLS--------------------GLTNLESINLS--FTGI 336
E LSDT V + LRHLS G+ L ++LS +
Sbjct: 307 ELSYCDSLSDTPVCELTRLRHLSELSLAGCASVTDIAVTALVRGMPELMRLDLSACHMHV 366
Query: 337 SDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTS---LTGLTHLDLFGA-RITDSGAAY 391
D SL +A L +L+ L L + +++D G+ L S LTHLD+ G RI+D+GA
Sbjct: 367 GDISLYAIATLPNLQVLRLHSCERVSDMGIGGLCSGAAAAALTHLDVRGCERISDAGATS 426
Query: 392 L-RNFKNLR--SLEIC 404
+ R K L+ SLE C
Sbjct: 427 IGRCLKQLQYLSLEHC 442
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 133/298 (44%), Gaps = 41/298 (13%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNN----- 117
L+ + +T +GL L + L +LD + ISD + + R L+ L L RR
Sbjct: 202 LTPACITHAGLRSLCGMTQLTALDLSGHAAISDASMAEIARHLTRLIDLDLRRPACDNPG 261
Query: 118 --AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+T G+ A A L L + L + G L L +L L + +C+ ++D+ +
Sbjct: 262 AAVVTDAGIAALASLTLLESVRLSQAQVGQAGCAALASLPRLRCLELSYCDSLSDTPVCE 321
Query: 176 LSGLTNLKSLQIS-CSKVTDSGI-AYLKGLQKLTLLNLEGCPVTAA--CLDSLSALGSLF 231
L+ L +L L ++ C+ VTD + A ++G+ +L L+L C + L +++ L +L
Sbjct: 322 LTRLRHLSELSLAGCASVTDIAVTALVRGMPELMRLDLSACHMHVGDISLYAIATLPNLQ 381
Query: 232 YLNLNRCQLSDD----GCEKFSKIGSLKVLNL-GFNEITDECLVHL-KGLTNLESLNLDS 285
L L+ C+ D G + +L L++ G I+D + + L L+ L+L+
Sbjct: 382 VLRLHSCERVSDMGIGGLCSGAAAAALTHLDVRGCERISDAGATSIGRCLKQLQYLSLEH 441
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
C + +G G+R LSGL +LE + + TG + S +
Sbjct: 442 CHL-----------------------IGDRGIRTLSGLPHLEILRVGGTGATTDSFAQ 476
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 35/230 (15%)
Query: 42 PG---VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGG 98
PG V D + +AS + L SV LS + V +G L L+ L+ ++C +SD
Sbjct: 260 PGAAVVTDAGIAALASL-TLLESVRLSQAQVGQAGCAALASLPRLRCLELSYCDSLSDTP 318
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRIHGGLVNLKGLMKL 157
+ L L +L+ LS ++T + A G+ L++LDL C +H G
Sbjct: 319 VCELTRLRHLSELSLAGCASVTDIAVTALVRGMPELMRLDLSAC-HMHVG---------- 367
Query: 158 ESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYL---KGLQKLTLLNLEG 213
D + ++ L NL+ L++ SC +V+D GI L LT L++ G
Sbjct: 368 ------------DISLYAIATLPNLQVLRLHSCERVSDMGIGGLCSGAAAAALTHLDVRG 415
Query: 214 CP-VTAACLDSL-SALGSLFYLNLNRCQL-SDDGCEKFSKIGSLKVLNLG 260
C ++ A S+ L L YL+L C L D G S + L++L +G
Sbjct: 416 CERISDAGATSIGRCLKQLQYLSLEHCHLIGDRGIRTLSGLPHLEILRVG 465
>gi|290993827|ref|XP_002679534.1| predicted protein [Naegleria gruberi]
gi|284093151|gb|EFC46790.1| predicted protein [Naegleria gruberi]
Length = 305
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 121/263 (46%), Gaps = 15/263 (5%)
Query: 199 YLKGLQKLTLLNLEGCPVTAACL-DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
+L + +L + L+ + +L + +L LN++ Q+ +G + S + L+ L
Sbjct: 14 FLGNIHRLMIYKLDDNAIYGEVFYRALQGMNNLTSLNISSQQIGPEGAKLVSGVKQLEKL 73
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGL 317
L FN + E ++ + NL SL + S IGDEG ++L+G+ L L++SD + G+
Sbjct: 74 ILVFNNVGTEGAKYISEMENLTSLIIRSNNIGDEGAIHLSGMKKLTNLDVSDNMIREDGM 133
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
R + +T L SF +L +++ + L L++ + AA+ LT L
Sbjct: 134 RAIRNMTQLR----SFVDCGSCALEEVSKMDQLTYLDVSH----NLSGAAIGKFNNLTWL 185
Query: 378 DLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGL 431
+ I D+ + + L L + +T G + L +L++ ++ I G+
Sbjct: 186 SMVNTCIGDNELELISKYPKLTKLFVSNNFITSEGVKPLSEMKQLKALHIGDNGINEEGV 245
Query: 432 RHLKPLKNLRSLTLESCKVTAND 454
+ + +K L L +E ++ ND
Sbjct: 246 KIISEMKQLTELNVEGLNISEND 268
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 130/264 (49%), Gaps = 14/264 (5%)
Query: 103 RGLSNLTSLSFRR--NNAITAQGM-KAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES 159
R L N+ L + +NAI + +A G+ NL L++ G + G+ +LE
Sbjct: 13 RFLGNIHRLMIYKLDDNAIYGEVFYRALQGMNNLTSLNISSQQIGPEGAKLVSGVKQLEK 72
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
L + + N T+ K +S + NL SL I + + D G +L G++KLT L++ +
Sbjct: 73 LILVFNNVGTEG-AKYISEMENLTSLIIRSNNIGDEGAIHLSGMKKLTNLDVSDNMIRED 131
Query: 220 CLDSLSALGSLF-YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
+ ++ + L +++ C L E+ SK+ L L++ N ++ + LT L
Sbjct: 132 GMRAIRNMTQLRSFVDCGSCAL-----EEVSKMDQLTYLDVSHN-LSGAAIGKFNNLTWL 185
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
+N +C IGD L ++ L L +S+ + S G++ LS + L+++++ GI++
Sbjct: 186 SMVN--TC-IGDNELELISKYPKLTKLFVSNNFITSEGVKPLSEMKQLKALHIGDNGINE 242
Query: 339 GSLRKLAGLSSLKSLNLDARQITD 362
++ ++ + L LN++ I++
Sbjct: 243 EGVKIISEMKQLTELNVEGLNISE 266
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 85/213 (39%), Gaps = 42/213 (19%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKA 126
++V G ++ + NL SL I D G HL G+ LT+L +N I GM+A
Sbjct: 78 NNVGTEGAKYISEMENLTSLIIR-SNNIGDEGAIHLSGMKKLTNLDVS-DNMIREDGMRA 135
Query: 127 FAGLINLVKL------DLERCTRIHGGLV-----NLKGLMKLESLNIKWC---------- 165
+ L LE +++ NL G + N+ W
Sbjct: 136 IRNMTQLRSFVDCGSCALEEVSKMDQLTYLDVSHNLSGAAIGKFNNLTWLSMVNTCIGDN 195
Query: 166 ------------------NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
N IT +KPLS + LK+L I + + + G+ + +++LT
Sbjct: 196 ELELISKYPKLTKLFVSNNFITSEGVKPLSEMKQLKALHIGDNGINEEGVKIISEMKQLT 255
Query: 208 LLNLEGCPVTAACLDSLSALGS-LFYLNLNRCQ 239
LN+EG ++ + L + S L LN+ C+
Sbjct: 256 ELNVEGLNISENDREVLLCMKSQLKSLNITGCE 288
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 12/239 (5%)
Query: 53 ASQG-SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSL 111
A QG ++L S+++S + G + L+ L F + G +++ + NLTSL
Sbjct: 39 ALQGMNNLTSLNISSQQIGPEGAKLVSGVKQLEKLILVFN-NVGTEGAKYISEMENLTSL 97
Query: 112 SFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDS 171
R NN I +G +G+ L LD+ G+ ++ + +L S + +C
Sbjct: 98 IIRSNN-IGDEGAIHLSGMKKLTNLDVSDNMIREDGMRAIRNMTQLRS----FVDC-GSC 151
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
++ +S + L L +S + SG A K LT L++ + L+ +S L
Sbjct: 152 ALEEVSKMDQLTYLDVSHNL---SGAAIGK-FNNLTWLSMVNTCIGDNELELISKYPKLT 207
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L ++ ++ +G + S++ LK L++G N I +E + + + L LN++ I +
Sbjct: 208 KLFVSNNFITSEGVKPLSEMKQLKALHIGDNGINEEGVKIISEMKQLTELNVEGLNISE 266
>gi|428304289|ref|YP_007141114.1| hypothetical protein Cri9333_0667 [Crinalium epipsammum PCC 9333]
gi|428245824|gb|AFZ11604.1| leucine-rich repeat-containing protein [Crinalium epipsammum PCC
9333]
Length = 382
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 135/283 (47%), Gaps = 49/283 (17%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
LE ++ L NLT L F N + GL NL L L R + ++K L+ L
Sbjct: 126 LEGIQALRNLTELRFGENKI---SDLAPLRGLTNLTTLHLYR-----NQISDVKPLLSLR 177
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
+L + SD+KPL+GLT L +L + +K+TD + L GL LT L L G ++
Sbjct: 178 NLTSLELSSNPISDLKPLAGLTKLTTLGLGGNKITD--LKPLAGLANLTTLELSGNKISD 235
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
L L+ L +L L L+ ++SD L + GLT L
Sbjct: 236 --LKPLAGLANLTKLYLSGNKISD--------------------------LKPVAGLTKL 267
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
L LD+ I D + L GL NL L L + ++ + ++ L+ LT+L + LS ISD
Sbjct: 268 TKLWLDNNQISD--VQPLAGLINLTFLSLDNNKI--NDVQPLANLTSLMGLGLSLNKISD 323
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG 381
+ L GL+ L L+L+ +I+D +T L GLT+L++ G
Sbjct: 324 --VTPLRGLTKLNWLDLNLNKISD-----VTPLAGLTNLNVNG 359
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 115/227 (50%), Gaps = 21/227 (9%)
Query: 237 RCQL-SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
R QL + D + + +K LNL EIT L ++ L NL L I D L
Sbjct: 95 RQQLGTGDKPLTLNALQRVKHLNLINKEIT--SLEGIQALRNLTELRFGENKISD--LAP 150
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L GL NL L L Q+ S ++ L L NL S+ LS ISD L+ LAGL+ L +L L
Sbjct: 151 LRGLTNLTTLHLYRNQI--SDVKPLLSLRNLTSLELSSNPISD--LKPLAGLTKLTTLGL 206
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----A 411
+ITD L L L LT L+L G +I+D L NL L + G ++D A
Sbjct: 207 GGNKITD--LKPLAGLANLTTLELSGNKISD--LKPLAGLANLTKLYLSGNKISDLKPVA 262
Query: 412 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
GLT L L + N++I+ ++ L L NL L+L++ K+ ND++ L
Sbjct: 263 GLTKLTKLWLDNNQISD--VQPLAGLINLTFLSLDNNKI--NDVQPL 305
>gi|407849405|gb|EKG04153.1| hypothetical protein TCSYLVIO_004793 [Trypanosoma cruzi]
Length = 835
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 186/421 (44%), Gaps = 73/421 (17%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
S+L ++ L + +++ +++L +C +L+ + N C + LE L L LT LS N
Sbjct: 193 SNLRNLTLCNTPLSEVMMLYLSECVSLERVVVNSCRGLR--SLECLSSLQRLTELSLL-N 249
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
IT +G+ + +L + L+ C MKL+ +N L
Sbjct: 250 MGITEEGLAFISSCNSLRHIQLDNC-------------MKLQGINC-------------L 283
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
L L++L +S ++V+D GI L L+ L L L ++ ++ + L L L++
Sbjct: 284 GSLIGLRTLSVSRNRVSDDGIRSLSNLRNLEQLRLVSFNRLSS-VEPVLCLDKLLELDIT 342
Query: 237 RCQLSDDGCEKFSKIG-----------------------SLKVLNLGFNEITDECLVHLK 273
++D+GC + G SL+ L+L + L L
Sbjct: 343 ENWVTDEGCAALANCGQIQKLKLASCRCVSDVRWICALTSLRFLDLSKTHVRSADLQLLT 402
Query: 274 GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQV---GSSGLRHLSGLTNLESI 329
LE L++ SC G+ D V GL +L L+L+DT + G+ LR + LT L
Sbjct: 403 VCQRLEELHVASCSGVKDASFVE--GLLSLGHLDLTDTSIKDAGTQSLRKCTALTFLSLQ 460
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA-RITDSG 388
+ F ++D ++ + L L +LNL+ ++ D + L T L L L +TD
Sbjct: 461 DCRF--LTD--IQFVEPLKDLLNLNLEGTEVVDANIIPLMHCTKLEVLSLRHCLFLTD-- 514
Query: 389 AAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAG------LRHLKPLKNLRS 442
LR K L+SL++ G +TD G++ VS +S RI +G L+PL LR
Sbjct: 515 VRCLRELKALKSLDLSGTYVTDEGVSD-VSQCISLERIDLSGCCLITHFEFLRPLTALRH 573
Query: 443 L 443
+
Sbjct: 574 V 574
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 190/461 (41%), Gaps = 94/461 (20%)
Query: 20 LTEVSLEAFRDCA-LQDLCLGQYPGVND-KWMDVIASQGSSLLSVDLSGSDVTDSGLIHL 77
+T+ A +C +Q L L V+D +W+ + +SL +DLS + V + L L
Sbjct: 346 VTDEGCAALANCGQIQKLKLASCRCVSDVRWICAL----TSLRFLDLSKTHVRSADLQLL 401
Query: 78 KDCSNLQSLDFNFC----------------------IQISDGGLEHLRGLSNLTSLSFRR 115
C L+ L C I D G + LR + LT LS +
Sbjct: 402 TVCQRLEELHVASCSGVKDASFVEGLLSLGHLDLTDTSIKDAGTQSLRKCTALTFLSLQD 461
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+T ++ L +L+ L+LE + ++ L KLE L+++ +C+ +D++
Sbjct: 462 CRFLT--DIQFVEPLKDLLNLNLEGTEVVDANIIPLMHCTKLEVLSLR--HCLFLTDVRC 517
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L L LKSL +S + VTD G++ + L ++L GC + + L L +L ++
Sbjct: 518 LRELKALKSLDLSGTYVTDEGVSDVSQCISLERIDLSGCCLITH-FEFLRPLTALRHVIA 576
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
+R + LD G+G G V
Sbjct: 577 DRMNV------------------------------------------LDVTGLGGSGSVE 594
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK-LAGLSSLKSLN 354
+ + K ++GS G+ L +L +L + I+D + L SL+ LN
Sbjct: 595 RVSIADCK-------RLGSMGMLEAPRLLDL---SLKKSAITDSGIHSVLLRCHSLRRLN 644
Query: 355 L-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG-GLTDAG 412
L + IT+ L+A+ L LT L + +IT+ A++ L L++ +TD
Sbjct: 645 LQNCTSITE--LSAVAQLPSLTELLVRNMKITNKSVAFVARCATLEKLQMVECVEITDVN 702
Query: 413 ----LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
L LV L++S + +TS G+ L NL+ L L C+
Sbjct: 703 SLKYLHRLVELDLSRTSVTSGGIVGLARCYNLKKLNLSGCR 743
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 374
SG+ +L L+NL ++ L T +S+ + L+ SL+ + +++ + + L L+SL L
Sbjct: 184 SGVTNLGVLSNLRNLTLCNTPLSEVMMLYLSECVSLERVVVNSCRGLRS-LECLSSLQRL 242
Query: 375 THLDLFGARITDSGAAYLRNFKNLRSLEI--CGG--GLTDAG-LTGLVSLNVSNSRITSA 429
T L L IT+ G A++ + +LR +++ C G+ G L GL +L+VS +R++
Sbjct: 243 TELSLLNMGITEEGLAFISSCNSLRHIQLDNCMKLQGINCLGSLIGLRTLSVSRNRVSDD 302
Query: 430 GLRHLKPLKNLRSLTLES 447
G+R L L+NL L L S
Sbjct: 303 GIRSLSNLRNLEQLRLVS 320
>gi|386333502|ref|YP_006029672.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
gi|334195951|gb|AEG69136.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
Length = 535
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 136/294 (46%), Gaps = 8/294 (2%)
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
+L S + V G+ L + LT L+L + A L A L LN+NR ++
Sbjct: 218 TLNASRNGVGGEGVRALVDCKTLTSLDLSENGLGDAEAQRLGASERLTMLNVNRNRIDVP 277
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
G + +L L++G N I D + L T L +LN++ G+G G+ L L
Sbjct: 278 GARALAACKTLTSLDIGGNSIGDAGVEALLAHTQLTTLNVERAGVGAHGVRALADCKTLT 337
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
L + + +G G + L+ T+L +++ GI + LA + L +LNL + D
Sbjct: 338 SLRIDNNNIGDEGAKTLAASTSLTALHSESNGIGLAGAKALAANTMLTTLNLGHNSVGDA 397
Query: 364 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG------LV 417
G A + T L L + ++D+GA L K L +L++ + D G L
Sbjct: 398 GAQAWLANTKLVSLSVRRNGLSDAGAIRLAASKTLTTLDVGDNAIKDTGARAFAANRTLT 457
Query: 418 SLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKR-LQSRDLPNL-VSF 469
+LN+S++ I +AG R L L SL L + ++ ++ L +R L +L VSF
Sbjct: 458 TLNLSSNEIGNAGARALAANTRLASLDLRNNRMLEAGVRALLVNRTLSSLGVSF 511
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 124/278 (44%), Gaps = 18/278 (6%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N + D++ + L L L ++ +++ G L + LT L++ G + A +++L
Sbjct: 248 NGLGDAEAQRLGASERLTMLNVNRNRIDVPGARALAACKTLTSLDIGGNSIGDAGVEALL 307
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
A L LN+ R + G + +L L + N I DE L T+L +L+ +S
Sbjct: 308 AHTQLTTLNVERAGVGAHGVRALADCKTLTSLRIDNNNIGDEGAKTLAASTSLTALHSES 367
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
GIG G L L L L VG +G + T L S+++ G+SD +LA
Sbjct: 368 NGIGLAGAKALAANTMLTTLNLGHNSVGDAGAQAWLANTKLVSLSVRRNGLSDAGAIRLA 427
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
+L +L++ I DTG A + LT L+L I ++GA L
Sbjct: 428 ASKTLTTLDVGDNAIKDTGARAFAANRTLTTLNLSSNEIGNAGARAL------------- 474
Query: 406 GGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSL 443
A T L SL++ N+R+ AG+R L + L SL
Sbjct: 475 -----AANTRLASLDLRNNRMLEAGVRALLVNRTLSSL 507
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 106/254 (41%), Gaps = 29/254 (11%)
Query: 201 KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ----LSDDGCEKFSKIGSLKV 256
L+KLTL P T A L L +L L+L+R + ++ G S++ L
Sbjct: 118 PALEKLTL----AGPFTDADLAGLPP--TLKELDLSRDRGRGFITAAGIAHLSRL-PLVR 170
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
LNL N I L L L++ CGIG E L L L S VG G
Sbjct: 171 LNLSGNRIGTVEARLLANHPTLTELDVSRCGIGPEEARALAASARLTTLNASRNGVGGEG 230
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
+R L L S++LS G+ D ++L L LN++ +I G AL + LT
Sbjct: 231 VRALVDCKTLTSLDLSENGLGDAEAQRLGASERLTMLNVNRNRIDVPGARALAACKTLTS 290
Query: 377 LDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKP 436
LD+ G I D+G L T L +LNV + + + G+R L
Sbjct: 291 LDIGGNSIGDAGVEALLAH------------------TQLTTLNVERAGVGAHGVRALAD 332
Query: 437 LKNLRSLTLESCKV 450
K L SL +++ +
Sbjct: 333 CKTLTSLRIDNNNI 346
>gi|290972751|ref|XP_002669114.1| predicted protein [Naegleria gruberi]
gi|284082657|gb|EFC36370.1| predicted protein [Naegleria gruberi]
Length = 259
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 132/252 (52%), Gaps = 15/252 (5%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAF-AGLINLVKLDLERCTRIHGGLVNLKGLM---KLESL 160
L N+T+L F+R + AF L+NL+K + T I+ + ++G M K+E L
Sbjct: 8 LQNVTNLLFKRE-------IGAFDYKLLNLMK-GITTLT-INYNSIGVEGAMHISKMEQL 58
Query: 161 -NIKWCNCI-TDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
N+ CN + + K +S L LK L I + + +G Y+ G+++LT L++ +
Sbjct: 59 TNLDICNSVLYEEGAKYISQLEQLKCLDIGSNSIGKNGAKYISGMKQLTRLDIFNNTICE 118
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
S+S + L +L + + +G + S++ L L++ N+I + ++ + L
Sbjct: 119 EGAKSISEMKQLTHLKITFNDIGTEGAKYISQLRKLTHLDISSNDIGAKGSKYISEMNQL 178
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
LN+ + IG+EG+ +++ + L L++ D ++ + G++++SG+ L ++++S+ I D
Sbjct: 179 TILNIYNNDIGNEGVKHISEMNQLTRLDIGDNEISAEGVKYISGMKQLTNLDISWNNIGD 238
Query: 339 GSLRKLAGLSSL 350
+ L+ + L
Sbjct: 239 EGAQFLSQMKQL 250
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 2/210 (0%)
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
G H+ + LT+L N+ + +G K + L L LD+ + G + G+ +L
Sbjct: 48 GAMHISKMEQLTNLDIC-NSVLYEEGAKYISQLEQLKCLDIGSNSIGKNGAKYISGMKQL 106
Query: 158 ESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
L+I + N I + K +S + L L+I+ + + G Y+ L+KLT L++ +
Sbjct: 107 TRLDI-FNNTICEEGAKSISEMKQLTHLKITFNDIGTEGAKYISQLRKLTHLDISSNDIG 165
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 277
A +S + L LN+ + ++G + S++ L L++G NEI+ E + ++ G+
Sbjct: 166 AKGSKYISEMNQLTILNIYNNDIGNEGVKHISEMNQLTRLDIGDNEISAEGVKYISGMKQ 225
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLEL 307
L +L++ IGDEG L+ + L LE
Sbjct: 226 LTNLDISWNNIGDEGAQFLSQMKQLIYLEF 255
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 96/198 (48%), Gaps = 6/198 (3%)
Query: 254 LKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVG 313
+ L + +N I E +H+ + L +L++ + + +EG ++ L LKCL++ +G
Sbjct: 34 ITTLTINYNSIGVEGAMHISKMEQLTNLDICNSVLYEEGAKYISQLEQLKCLDIGSNSIG 93
Query: 314 SSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 373
+G +++SG+ L +++ I + + ++ + L L + I G ++ L
Sbjct: 94 KNGAKYISGMKQLTRLDIFNNTICEEGAKSISEMKQLTHLKITFNDIGTEGAKYISQLRK 153
Query: 374 LTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRIT 427
LTHLD+ I G+ Y+ L L I + + G + L L++ ++ I+
Sbjct: 154 LTHLDISSNDIGAKGSKYISEMNQLTILNIYNNDIGNEGVKHISEMNQLTRLDIGDNEIS 213
Query: 428 SAGLRHLKPLKNLRSLTL 445
+ G++++ +K L +L +
Sbjct: 214 AEGVKYISGMKQLTNLDI 231
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 105/213 (49%), Gaps = 3/213 (1%)
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
+KG+ LT+ N V A +S + L L++ L ++G + S++ LK L++
Sbjct: 31 MKGITTLTI-NYNSIGVEGAM--HISKMEQLTNLDICNSVLYEEGAKYISQLEQLKCLDI 87
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
G N I ++ G+ L L++ + I +EG +++ + L L+++ +G+ G ++
Sbjct: 88 GSNSIGKNGAKYISGMKQLTRLDIFNNTICEEGAKSISEMKQLTHLKITFNDIGTEGAKY 147
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
+S L L +++S I + ++ ++ L LN+ I + G+ ++ + LT LD+
Sbjct: 148 ISQLRKLTHLDISSNDIGAKGSKYISEMNQLTILNIYNNDIGNEGVKHISEMNQLTRLDI 207
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
I+ G Y+ K L +L+I + D G
Sbjct: 208 GDNEISAEGVKYISGMKQLTNLDISWNNIGDEG 240
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 111/233 (47%)
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
D K L+ + + +L I+ + + G ++ +++LT L++ + +S L L
Sbjct: 24 DYKLLNLMKGITTLTINYNSIGVEGAMHISKMEQLTNLDICNSVLYEEGAKYISQLEQLK 83
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
L++ + +G + S + L L++ N I +E + + L L + IG E
Sbjct: 84 CLDIGSNSIGKNGAKYISGMKQLTRLDIFNNTICEEGAKSISEMKQLTHLKITFNDIGTE 143
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
G ++ L L L++S +G+ G +++S + L +N+ I + ++ ++ ++ L
Sbjct: 144 GAKYISQLRKLTHLDISSNDIGAKGSKYISEMNQLTILNIYNNDIGNEGVKHISEMNQLT 203
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
L++ +I+ G+ ++ + LT+LD+ I D GA +L K L LE
Sbjct: 204 RLDIGDNEISAEGVKYISGMKQLTNLDISWNNIGDEGAQFLSQMKQLIYLEFI 256
>gi|395743765|ref|XP_003777984.1| PREDICTED: F-box/LRR-repeat protein 14-like, partial [Pongo abelii]
Length = 296
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 164/319 (51%), Gaps = 55/319 (17%)
Query: 72 SGLIH--LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAG 129
+GL H +++ +L++L+ + C QI+D L + AQ +K
Sbjct: 1 NGLGHAFVQEIGSLRALNLSLCKQITDSSLGRI------------------AQYLKG--- 39
Query: 130 LINLVKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN------ 181
L L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T
Sbjct: 40 ---LEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGC 96
Query: 182 --LKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLN 236
L+ L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL
Sbjct: 97 LGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLR 156
Query: 237 RC-QLSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDE 291
C +SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+
Sbjct: 157 SCDNISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDD 215
Query: 292 GL----VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
G+ + GL L +C+ ++D + HLS LT ++ T I+ L ++
Sbjct: 216 GINRMVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYG--CTRITKRGLERI 272
Query: 345 AGLSSLKSLNLDARQITDT 363
L LK LNL Q+TD+
Sbjct: 273 TQLPCLKVLNLGLWQMTDS 291
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 153/312 (49%), Gaps = 47/312 (15%)
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNL 211
L +LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL
Sbjct: 14 LRALNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNL 71
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH 271
C LS +G + R + +GC ++ +L+ ++TD L H
Sbjct: 72 RSCR-------HLSDVGIGHLAGMTRS--AAEGCLGLEQL-TLQ----DCQKLTDLSLKH 117
Query: 272 L-KGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLE 327
+ +GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L
Sbjct: 118 ISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLS 177
Query: 328 SINLSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-AR 383
+++SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ R
Sbjct: 178 GLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVR 237
Query: 384 ITDSGAAYL-RNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRS 442
ITD G + + L +++ G +RIT GL + L L+
Sbjct: 238 ITDKGLELIAEHLSQLTGIDLYG-----------------CTRITKRGLERITQLPCLKV 280
Query: 443 LTLESCKVTAND 454
L L ++T ++
Sbjct: 281 LNLGLWQMTDSE 292
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 110 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 169
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 170 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 229
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 230 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 266
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 267 RGLERITQLPCLKVLNLGLWQMTD 290
>gi|302802011|ref|XP_002982761.1| hypothetical protein SELMODRAFT_52320 [Selaginella moellendorffii]
gi|300149351|gb|EFJ16006.1| hypothetical protein SELMODRAFT_52320 [Selaginella moellendorffii]
Length = 516
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 134/506 (26%), Positives = 208/506 (41%), Gaps = 98/506 (19%)
Query: 1 MLPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIAS-QGSSL 59
+LP +++ + ++L+ + LE F+ ++++L L V+ +WM I + +
Sbjct: 28 ILPAHLAESLLHQLLVKNLFSPPLLELFQ-LSVEELDLNGELSVDAEWMAYIGGFRHLRV 86
Query: 60 LSVDLSGSDVTDSGLIHLKDCSNLQSLDFNF-------CIQISDGGLEHLRGLSNLTSLS 112
L V+ S + +S + HL L F+F C +I++ GLEH+ L L L
Sbjct: 87 LKVE-SCKALNNSAIWHLSG-----KLHFSFERKLIDRCSKITNQGLEHILTLGKLKHLG 140
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGL------VNLKGLMKLESLNIKWCN 166
I QG+ A L NL LDL GGL V+ +++L W +
Sbjct: 141 LS-ETGIGEQGIGKLAVLRNLSHLDL-------GGLPVTDSHVSSLLVLQLLIDLQLWGS 192
Query: 167 CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT--------- 217
IT+ L G L+ L ++ +KV+ + + +++ LNL C V
Sbjct: 193 SITNEGANMLRGFPRLEILNLAWTKVS-----VVPSMPRVSQLNLSHCVVLSVSEEGSAL 247
Query: 218 -------AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK-VLNLGFNEI----T 265
A D L L S L+ +LS + +GSLK V+ L + + +
Sbjct: 248 DQLRLSGATIQDPLRVLHSHSLPELSVLELSATNLAALTFLGSLKRVVKLDLSSMPSVSS 307
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC------NLKCLELSDTQVGSSGLRH 319
D + K NL+ L+L +G EG+ LTG +L+ ++D+ G GL
Sbjct: 308 DTMNLLAKCARNLKHLDLSDTRVGSEGVAVLTGHVPALEHLSLRGTSITDSVFGYLGLMP 367
Query: 320 LSGLTNLESINLSFTGI-----------------SDGSLRKLAGLSSLKSLNLDARQITD 362
L L +++ N S TG+ S S+ L L +L+ L+L + +D
Sbjct: 368 L--LIDIDLSNTSLTGMPVFEFTKVYYTCAPVDSSFWSVLHLQQLHNLRRLDLRRTRFSD 425
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVS 422
L L LTHL L +TD+ L NLRSL G LTD
Sbjct: 426 KSCKRLACLVRLTHLLLCAEFLTDASLHELSALPNLRSLAFQGTVLTD------------ 473
Query: 423 NSRITSAGLRHLKPLKNLRSLTLESC 448
AGLR LKP L L L C
Sbjct: 474 ------AGLRSLKPPPPLEELDLTDC 493
>gi|290972775|ref|XP_002669126.1| predicted protein [Naegleria gruberi]
gi|284082669|gb|EFC36382.1| predicted protein [Naegleria gruberi]
Length = 467
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 181/393 (46%), Gaps = 42/393 (10%)
Query: 40 QYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGL 99
++ +N+ M+ IAS + L+S+D+ + G+ L N L+ F +
Sbjct: 72 KFNNINEYEMESIASM-NKLISLDIGCARTNLEGIKILSSKDNFTELNIEFSFFDQVPYM 130
Query: 100 EHLRGLSNLTSLSFRRN-----NAITAQGMKAFAGLINL----VKLDLE----------- 139
E++ +++L L N A +A +K+ L +L + +DLE
Sbjct: 131 EYVSKMTDLRKLDISNNPISLNRAKSANYLKSLEKLTDLTVTYLDMDLEFLKSISNLKFL 190
Query: 140 RCTRIHGGLVNLKG------LMKLESLNIKWCNCITDSDMKPLSG-LTNLKSLQISCSKV 192
I+G LV ++G + +L+ L+I N I + K +S L L +L+I +++
Sbjct: 191 TSLSIYGNLVGIEGVKIICSMFQLKKLDIT-LNAIGEEGAKLISNSLKQLNTLRIGDNQI 249
Query: 193 TDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL--FYLNLNRC---QLSDDGCEK 247
D G + ++ LT L+LE + L+ + + L LN N +L +
Sbjct: 250 GDKGAESISSMKTLTALDLEESNIGPQGLEFICQMDQLKSLMLNFNTIGGSRLPINALTN 309
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL-TGLCNLKCLE 306
++I SL + N+G E + + +T L ++N+ +GDE L + L NL L+
Sbjct: 310 LTEI-SLVLTNIGI-----EIVKSISLITKLRNVNISDNRLGDECLEIIGNSLFNLTELD 363
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA 366
+S+ + +G ++LS L NL +N ++D S++ L L LKSL ++ Q+ D G A
Sbjct: 364 ISENNMTENGTKYLSSLKNLTHLNAEDNRLNDESIQHLCSLKKLKSLYINNNQVGDEGFA 423
Query: 367 ALT-SLTGLTHLDLFGARITDSGAAYLRNFKNL 398
+ S+ L + + T+ G L++ K+L
Sbjct: 424 LIANSMKQLRLVHAHNNKETEIGRTLLKSRKHL 456
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 177/402 (44%), Gaps = 74/402 (18%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLES----- 159
L+ L S+ + NN I M++ A + L+ LD+ C R NL+G+ L S
Sbjct: 63 LTQLKSIVLKFNN-INEYEMESIASMNKLISLDI-GCAR-----TNLEGIKILSSKDNFT 115
Query: 160 -LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT---DSGIAYLKGLQKLTLLNLEGCP 215
LNI++ M+ +S +T+L+ L IS + ++ YLK L+KLT L +
Sbjct: 116 ELNIEFSFFDQVPYMEYVSKMTDLRKLDISNNPISLNRAKSANYLKSLEKLTDLTVTYLD 175
Query: 216 VTAACLDSLSALG---------------------SLFYL---NLNRCQLSDDGCEKFSK- 250
+ L S+S L S+F L ++ + ++G + S
Sbjct: 176 MDLEFLKSISNLKFLTSLSIYGNLVGIEGVKIICSMFQLKKLDITLNAIGEEGAKLISNS 235
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT 310
+ L L +G N+I D+ + + L +L+L+ IG +GL + + LK L L+
Sbjct: 236 LKQLNTLRIGDNQIGDKGAESISSMKTLTALDLEESNIGPQGLEFICQMDQLKSLMLNFN 295
Query: 311 QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL-DAR----------- 358
+G S L ++ LTNL I+L T I ++ ++ ++ L+++N+ D R
Sbjct: 296 TIGGSRL-PINALTNLTEISLVLTNIGIEIVKSISLITKLRNVNISDNRLGDECLEIIGN 354
Query: 359 -------------QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
+T+ G L+SL LTHL+ R+ D +L + K L+SL I
Sbjct: 355 SLFNLTELDISENNMTENGTKYLSSLKNLTHLNAEDNRLNDESIQHLCSLKKLKSLYINN 414
Query: 406 GGLTDAGLTGLVS-------LNVSNSRITSAGLRHLKPLKNL 440
+ D G + + ++ N++ T G LK K+L
Sbjct: 415 NQVGDEGFALIANSMKQLRLVHAHNNKETEIGRTLLKSRKHL 456
>gi|422414916|ref|ZP_16491873.1| internalin A, partial [Listeria innocua FSL J1-023]
gi|313625062|gb|EFR94940.1| internalin A [Listeria innocua FSL J1-023]
Length = 676
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 173/385 (44%), Gaps = 60/385 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDIVMNNN-QIAD--ISPLANLTNLTGLTLFTN 152
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+K L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 153 QITDIDPLK---NLTNLNRLELSGNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN-- 234
+ LT L+ L IS +KVTD + L KLT NLE T + ++ LG L L+
Sbjct: 204 ANLTTLERLDISSNKVTDISV-----LSKLT--NLERLIATNNQISDITPLGILINLDEL 256
Query: 235 -LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
LN QL D G + +L L+L N+I++ L L LT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LVSLTNLTNLDLANNQISN--LAPLTDLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL + Q+ + +S L NL + L ISD SL K
Sbjct: 311 SPLAGLTALTNLELHENQL--EDISPISNLKNLTYLTLYINNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGNNQISD--LTPLANLTRITQLGLNDQAWTNPPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAG 412
N KN+ I ++D G
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGG 451
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 21/147 (14%)
Query: 316 GLRHLSG---LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD-TGLAALTSL 371
G++ ++G L NL IN S ++D + L L+ L + ++ QI D + LA LT+L
Sbjct: 87 GIKSINGVEYLNNLTQINFSNNQLTD--ITPLKDLTKLVDIVMNNNQIADISPLANLTNL 144
Query: 372 TGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD-AGLTGLVSLNVSNSRITSAG 430
TGLT LF +ITD L+N NL LE+ G ++D + L+GL SL + S G
Sbjct: 145 TGLT---LFTNQITDIDP--LKNLTNLNRLELSGNTISDISALSGLTSL-----QQLSFG 194
Query: 431 --LRHLKPLKNLRSLTLESCKVTANDI 455
+ LKPL NL TLE +++N +
Sbjct: 195 NQVTDLKPLANLT--TLERLDISSNKV 219
>gi|357619268|gb|EHJ71912.1| hypothetical protein KGM_06037 [Danaus plexippus]
Length = 453
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 117/240 (48%), Gaps = 10/240 (4%)
Query: 9 QIFNELVYSRC--LTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG 66
Q+ EL + C +TE L A + L L + D+ + +A SL L
Sbjct: 192 QVLFELELTGCNEITEAGLWACLTPRIVSLTLTDCINIADEAVGAVAQLLPSLYEFSLQA 251
Query: 67 SDVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQG 123
VTD+ L + K ++L L + C ++++ G+ ++ L NLT LS + +T +G
Sbjct: 252 YHVTDAALGYFSPKQSASLSILRLHSCWELTNHGVVNIVHSLPNLTVLSLSGCSKVTDEG 311
Query: 124 MKAFA-GLINLVKLDLERCTRIHGGLVNLKG--LMKLESLNIKWCNCITDSDMKPLSGLT 180
++ A L L LDL C R+ + L +LE L + C ITD + +S +
Sbjct: 312 VELLAENLPRLRSLDLSWCPRVTDNALEYIACDLNQLEELTLDRCVHITDIGVGYISTMQ 371
Query: 181 NLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRC 238
+L +L + CS+V D G+ +L G++ L LL+L GCP +T+ L SL L L L L C
Sbjct: 372 SLAALFLRWCSQVRDFGVQHLCGMRSLQLLSLAGCPLLTSGGLSSLIQLRQLRELELTNC 431
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 147/317 (46%), Gaps = 39/317 (12%)
Query: 169 TDSDMK------PLSGLTNLKSLQISCSKVTDSGI-AYLKGLQKLTLLNLEGC-PVTAAC 220
TD D+ PLS ++ ++ + +TD G+ + L LQ L L L GC +T A
Sbjct: 151 TDDDINELIKQFPLSA-HHIHAIGLKGCTITDRGLESILDHLQVLFELELTGCNEITEAG 209
Query: 221 LDSLSALGSLFYLNLNRC-QLSDDGCEKFSKI-GSLKVLNLGFNEITDECLVHL--KGLT 276
L + + L L C ++D+ +++ SL +L +TD L + K
Sbjct: 210 LWA-CLTPRIVSLTLTDCINIADEAVGAVAQLLPSLYEFSLQAYHVTDAALGYFSPKQSA 268
Query: 277 NLESLNLDSCG-IGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINLS 332
+L L L SC + + G+VN+ L NL L LS ++V G+ L+ L L S++LS
Sbjct: 269 SLSILRLHSCWELTNHGVVNIVHSLPNLTVLSLSGCSKVTDEGVELLAENLPRLRSLDLS 328
Query: 333 F-TGISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALTSLTGLTHLDL-FGARITDSG 388
+ ++D +L +A L+ L+ L LD ITD G+ ++++ L L L + +++ D G
Sbjct: 329 WCPRVTDNALEYIACDLNQLEELTLDRCVHITDIGVGYISTMQSLAALFLRWCSQVRDFG 388
Query: 389 AAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
+L ++L+ L + G L +TS GL L L+ LR L L +C
Sbjct: 389 VQHLCGMRSLQLLSLAGCPL-----------------LTSGGLSSLIQLRQLRELELTNC 431
Query: 449 KVTANDIKRLQSRDLPN 465
+ ++ LP
Sbjct: 432 PGASPELFDYLHEHLPR 448
>gi|158298684|ref|XP_318863.4| AGAP009775-PA [Anopheles gambiae str. PEST]
gi|157014003|gb|EAA14468.4| AGAP009775-PA [Anopheles gambiae str. PEST]
Length = 547
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 147/349 (42%), Gaps = 58/349 (16%)
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIH----GGLVNLKGLMKLES 159
GL L ++ RNN IT M+ F G NL++LDL R R+ G +LK L L
Sbjct: 110 GLVRLKTIDLSRNN-ITQLAMENFRGQDNLIELDLSR-NRLDNIASGTFAHLKELKTLHL 167
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
++ N IT+ + + L LK L +S + + D K +Q L +L + GC ++
Sbjct: 168 ID----NSITEFNQRLFLHLAKLKHLDLSYNSIDDLPPEVFKDVQDLKILRVRGCRLSNI 223
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNE---ITDECLVHLKGLT 276
+ L L L+L + Q+ E+F + L+ L L N+ I DE +H KGLT
Sbjct: 224 NPQIYNILSHLTELDLGQNQIKFLDKEEFKDLRHLQTLRLDGNQLSVIIDELFIHQKGLT 283
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
L+ I D N L NL L+ S ++ L NL+++N+S
Sbjct: 284 LLDISRNRLAKIADRAFEN---LANLTFLDASYNKLSHIEPVCFRPLRNLQTLNIS---- 336
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK 396
++ LD ++ DT + + ++TGL + D G L F
Sbjct: 337 --------------GNIQLDLGEMEDT-INVIKNITGLM--------VADMGTLPLNLFS 373
Query: 397 NLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
R L +LN+S + I + L+ ++PL L L L
Sbjct: 374 PFRHLS---------------ALNLSGNHIDNFTLQIIEPLNQLEFLDL 407
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 9/188 (4%)
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
+ K L L ++ + +GD GL LK ++LS + + + G NL ++
Sbjct: 86 YFKKLEILRIIDANVPSVGDRSF---WGLVRLKTIDLSRNNITQLAMENFRGQDNLIELD 142
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
LS + + + A L LK+L+L IT+ L L HLDL I D
Sbjct: 143 LSRNRLDNIASGTFAHLKELKTLHLIDNSITEFNQRLFLHLAKLKHLDLSYNSIDDLPPE 202
Query: 391 YLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
++ ++L+ L + G L++ L+ L L++ ++I K L++L++L
Sbjct: 203 VFKDVQDLKILRVRGCRLSNINPQIYNILSHLTELDLGQNQIKFLDKEEFKDLRHLQTLR 262
Query: 445 LESCKVTA 452
L+ +++
Sbjct: 263 LDGNQLSV 270
>gi|77556733|gb|ABA99529.1| Leucine Rich Repeat family protein, expressed [Oryza sativa
Japonica Group]
Length = 488
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 197/401 (49%), Gaps = 31/401 (7%)
Query: 80 CSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL 138
C L+ L +C +ISD G++ L + L SL + + +++ + L L +L +
Sbjct: 10 CPRLEKLSLKWCREISDIGIDLLSKKCHELRSLDISYLK-VGNESLRSISSLEKLEELAM 68
Query: 139 ERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG 196
C+ I + L KG L+S+++ C+ +T + L N + + +
Sbjct: 69 VCCSCIDDDGLELLGKGSNSLQSVDVSRCDHVTSQGLASLIDGHNFLQKLNAADSLHEMR 128
Query: 197 IAYLKGLQKL----TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKF-SK 250
++L L KL T+L L+G V+++ L ++ +L + L++C ++D+G ++
Sbjct: 129 QSFLSNLAKLKDTLTVLRLDGLEVSSSVLLAIGGCNNLVEIGLSKCNGVTDEGISSLVTQ 188
Query: 251 IGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLTGLC-NLKCLE 306
L+V++L N +T+ L + + +E L L+SC I ++GL + C NLK ++
Sbjct: 189 CSHLRVIDLTCCNLLTNNALDSIAENCKMVEHLRLESCSSISEKGLEQIATSCPNLKEID 248
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLD---ARQITD 362
L+D V + L+HL+ + L + L + ISD L ++ S K + LD ITD
Sbjct: 249 LTDCGVNDAALQHLAKCSELLVLKLGLCSSISDKGLAFISS-SCGKLIELDLYRCNSITD 307
Query: 363 TGLAALTS-LTGLTHLDL-FGARITDSGAAYLRNFKNLRSLE------ICGGGLTDA--G 412
GLAAL + + L+L + +ITDSG +L + + L +LE I G G++ G
Sbjct: 308 DGLAALANGCKKIKMLNLCYCNKITDSGLGHLGSLEELTNLELRCLVRITGIGISSVAIG 367
Query: 413 LTGLVSLNVSNSR-ITSAGLRHLKPLK-NLRSLTLESCKVT 451
L+ +++ + AGL L NLR LT+ C+VT
Sbjct: 368 CKNLIEIDLKRCYSVDDAGLWALARYALNLRQLTISYCQVT 408
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 164/375 (43%), Gaps = 83/375 (22%)
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTN-LKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
G +LE L++KWC I+D + LS + L+SL IS KV + + + L+KL L +
Sbjct: 9 GCPRLEKLSLKWCREISDIGIDLLSKKCHELRSLDISYLKVGNESLRSISSLEKLEELAM 68
Query: 212 EGCPVTAACLDS--LSALG----SLFYLNLNRCQLSD--------DGCEKFSKIGS---- 253
V +C+D L LG SL ++++RC DG K+ +
Sbjct: 69 ----VCCSCIDDDGLELLGKGSNSLQSVDVSRCDHVTSQGLASLIDGHNFLQKLNAADSL 124
Query: 254 -----------------LKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVN 295
L VL L E++ L+ + G NL + L C G+ DEG+ +
Sbjct: 125 HEMRQSFLSNLAKLKDTLTVLRLDGLEVSSSVLLAIGGCNNLVEIGLSKCNGVTDEGISS 184
Query: 296 LTGLC------NLKCLEL----------------------SDTQVGSSGLRHLS-GLTNL 326
L C +L C L S + + GL ++ NL
Sbjct: 185 LVTQCSHLRVIDLTCCNLLTNNALDSIAENCKMVEHLRLESCSSISEKGLEQIATSCPNL 244
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLTG-LTHLDLFGAR- 383
+ I+L+ G++D +L+ LA S L L L I+D GLA ++S G L LDL+
Sbjct: 245 KEIDLTDCGVNDAALQHLAKCSELLVLKLGLCSSISDKGLAFISSSCGKLIELDLYRCNS 304
Query: 384 ITDSGAAYLRN-FKNLRSLEIC-GGGLTDAGLTGLVSL-NVSN------SRITSAGLRHL 434
ITD G A L N K ++ L +C +TD+GL L SL ++N RIT G+ +
Sbjct: 305 ITDDGLAALANGCKKIKMLNLCYCNKITDSGLGHLGSLEELTNLELRCLVRITGIGISSV 364
Query: 435 KP-LKNLRSLTLESC 448
KNL + L+ C
Sbjct: 365 AIGCKNLIEIDLKRC 379
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 32/230 (13%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL- 102
+++K ++ IA+ +L +DL+ V D+ L HL CS L L C ISD GL +
Sbjct: 229 ISEKGLEQIATSCPNLKEIDLTDCGVNDAALQHLAKCSELLVLKLGLCSSISDKGLAFIS 288
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
L L R N+IT G+ A A G K++ LN+
Sbjct: 289 SSCGKLIELDLYRCNSITDDGLAALAN-----------------------GCKKIKMLNL 325
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISC-SKVTDSGIAYLK-GLQKLTLLNLEGC-PVTAA 219
+CN ITDS + L L L +L++ C ++T GI+ + G + L ++L+ C V A
Sbjct: 326 CYCNKITDSGLGHLGSLEELTNLELRCLVRITGIGISSVAIGCKNLIEIDLKRCYSVDDA 385
Query: 220 CLDSLSALG-SLFYLNLNRCQLSDDG-CEKFSKIGSL---KVLNLGFNEI 264
L +L+ +L L ++ CQ++ G C S + L K+++L + I
Sbjct: 386 GLWALARYALNLRQLTISYCQVTGLGLCHLLSSLRCLQDVKMVHLSWVSI 435
>gi|46445832|ref|YP_007197.1| F-box protein [Candidatus Protochlamydia amoebophila UWE25]
gi|46399473|emb|CAF22922.1| putative F-box protein [Candidatus Protochlamydia amoebophila
UWE25]
Length = 329
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 75/133 (56%), Gaps = 2/133 (1%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
+TD+ L+ LK+C NL+ L C ++D GL HL L L L+ + +T G+
Sbjct: 197 LTDAHLLTLKNCKNLKVLQLQACRNLTDVGLAHLAPLEALKHLNLSECDNLTDAGLAHLT 256
Query: 129 GLINLVKLDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
LI L LDL+ C ++ GL L+ L+ L+ LN+K C+ +TD + L L L+ L +
Sbjct: 257 LLIALQYLDLKGCAKLTDAGLARLRPLVALQHLNLKGCDNLTDIGLAHLRPLVALQHLDL 316
Query: 188 S-CSKVTDSGIAY 199
C+ +TD+G+A+
Sbjct: 317 DGCNNLTDAGLAH 329
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 84/145 (57%), Gaps = 5/145 (3%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
++E+++ +TD+ + L NLK LQ+ +C +TD G+A+L L+ L LNL C
Sbjct: 185 EIEAIHFSDNVYLTDAHLLTLKNCKNLKVLQLQACRNLTDVGLAHLAPLEALKHLNLSEC 244
Query: 215 P-VTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVH 271
+T A L L+ L +L YL+L C +L+D G + + +L+ LNL G + +TD L H
Sbjct: 245 DNLTDAGLAHLTLLIALQYLDLKGCAKLTDAGLARLRPLVALQHLNLKGCDNLTDIGLAH 304
Query: 272 LKGLTNLESLNLDSC-GIGDEGLVN 295
L+ L L+ L+LD C + D GL +
Sbjct: 305 LRPLVALQHLDLDGCNNLTDAGLAH 329
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSL 341
D+ + D L+ L NLK L+L + + GL HL+ L L+ +NLS ++D L
Sbjct: 193 DNVYLTDAHLLTLKNCKNLKVLQLQACRNLTDVGLAHLAPLEALKHLNLSECDNLTDAGL 252
Query: 342 RKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLR 399
L L +L+ L+L ++TD GLA L L L HL+L G +TD G A+LR L+
Sbjct: 253 AHLTLLIALQYLDLKGCAKLTDAGLARLRPLVALQHLNLKGCDNLTDIGLAHLRPLVALQ 312
Query: 400 SLEICG-GGLTDAGL 413
L++ G LTDAGL
Sbjct: 313 HLDLDGCNNLTDAGL 327
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 75/143 (52%), Gaps = 13/143 (9%)
Query: 317 LRHLSGLTNLESINLS-FTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGL 374
L H S +E+I+ S ++D L L +LK L L A R +TD GLA L L L
Sbjct: 179 LNHFSN--EIEAIHFSDNVYLTDAHLLTLKNCKNLKVLQLQACRNLTDVGLAHLAPLEAL 236
Query: 375 THLDLFGA-RITDSGAAYLRNFKNLRSLEICG-GGLTDAGLT---GLVSLNVSNSR---- 425
HL+L +TD+G A+L L+ L++ G LTDAGL LV+L N +
Sbjct: 237 KHLNLSECDNLTDAGLAHLTLLIALQYLDLKGCAKLTDAGLARLRPLVALQHLNLKGCDN 296
Query: 426 ITSAGLRHLKPLKNLRSLTLESC 448
+T GL HL+PL L+ L L+ C
Sbjct: 297 LTDIGLAHLRPLVALQHLDLDGC 319
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Query: 102 LRGLSN-LTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLES 159
L SN + ++ F N +T + NL L L+ C + GL +L L L+
Sbjct: 179 LNHFSNEIEAIHFSDNVYLTDAHLLTLKNCKNLKVLQLQACRNLTDVGLAHLAPLEALKH 238
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCP-VT 217
LN+ C+ +TD+ + L+ L L+ L + C+K+TD+G+A L+ L L LNL+GC +T
Sbjct: 239 LNLSECDNLTDAGLAHLTLLIALQYLDLKGCAKLTDAGLARLRPLVALQHLNLKGCDNLT 298
Query: 218 AACLDSLSALGSLFYLNLNRC-QLSDDG 244
L L L +L +L+L+ C L+D G
Sbjct: 299 DIGLAHLRPLVALQHLDLDGCNNLTDAG 326
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 57 SSLLSVDLSGSD-VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
+L ++LS D +TD+GL HL LQ LD C +++D GL LR L L L+ +
Sbjct: 234 EALKHLNLSECDNLTDAGLAHLTLLIALQYLDLKGCAKLTDAGLARLRPLVALQHLNLKG 293
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRI 144
+ +T G+ L+ L LDL+ C +
Sbjct: 294 CDNLTDIGLAHLRPLVALQHLDLDGCNNL 322
>gi|332376374|gb|AEE63327.1| unknown [Dendroctonus ponderosae]
Length = 507
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 127/305 (41%), Gaps = 33/305 (10%)
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K GL L+ LQ++ +++ G +K+ LNLE ++ + L L L
Sbjct: 108 KAFMGLVFLQHLQLNNNQIRSIFPGTFIGTKKIEQLNLENNEISILVEGGFAELLQLSVL 167
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
NL + FS + L +L+LGFN+ITD +H + L
Sbjct: 168 NLRSNNIKIIDPRAFSGLQKLVLLDLGFNQITD---LH-------------------QSL 205
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
VNLT L + L++ + S L NL +NLS + D + + LKSL
Sbjct: 206 VNLTAL---EVLKMEHNLIHQLSGSEFSSLANLYQLNLSANLLVDNFTIHMQPGNQLKSL 262
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD--- 410
+L QI + + L L L L I+D G +LR LE+ L+
Sbjct: 263 SLSHNQIEELKFG-MAHLDTLEELQLSFNNISDIGNNMFEGMFSLRQLELPYNNLSQFKT 321
Query: 411 ---AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLV 467
+GL L SLN S++ I + + PL+NL L L + + D L SR LP L
Sbjct: 322 GWFSGLPQLTSLNFSHNHIEEIVISSVFPLRNLHFLDLSNNALGTFDYSALISR-LPGLT 380
Query: 468 SFRPE 472
R E
Sbjct: 381 YLRLE 385
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 109/239 (45%), Gaps = 19/239 (7%)
Query: 96 DGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVNLKG 153
+GG L LS L R+N I +AF+GL LV LDL + T +H LVNL
Sbjct: 155 EGGFAELLQLSVLN----LRSNNIKIIDPRAFSGLQKLVLLDLGFNQITDLHQSLVNLTA 210
Query: 154 L--MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
L +K+E N I S L NL L +S + + D+ +++ +L L+L
Sbjct: 211 LEVLKMEH------NLIHQLSGSEFSSLANLYQLNLSANLLVDNFTIHMQPGNQLKSLSL 264
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH 271
+ ++ L +L L L+ +SD G F + SL+ L L +N ++
Sbjct: 265 SHNQIEELKF-GMAHLDTLEELQLSFNNISDIGNNMFEGMFSLRQLELPYNNLSQFKTGW 323
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVG----SSGLRHLSGLTNL 326
GL L SLN I + + ++ L NL L+LS+ +G S+ + L GLT L
Sbjct: 324 FSGLPQLTSLNFSHNHIEEIVISSVFPLRNLHFLDLSNNALGTFDYSALISRLPGLTYL 382
>gi|430746594|ref|YP_007205723.1| hypothetical protein Sinac_5912 [Singulisphaera acidiphila DSM
18658]
gi|430018314|gb|AGA30028.1| hypothetical protein Sinac_5912 [Singulisphaera acidiphila DSM
18658]
Length = 170
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 8/170 (4%)
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
NL+GCP LSA+ L L + ++ D G + + + L+L +ITD L
Sbjct: 6 NLQGCPNANGI--RLSAV-VLKRLAIENTRVGDAGMAQLASHPGIAELDLHGTKITDAGL 62
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
LKG+ +L L+L + GI D GL +L G+ L+ L+L T++ +G+ HL GL L+ +
Sbjct: 63 KPLKGMKSLVHLSLRATGITDAGLAHLAGMDRLERLDLGYTKISDAGIEHLKGLKGLDIV 122
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
T ++D S+ + G L+++N +IT+ G L + L LD+
Sbjct: 123 E---TNVTDRSIPIIGGFERLEAINPRGSKITEAGEEQLRKM--LPKLDI 167
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
LK L + +T+VG +G+ L+ + ++L T I+D L+ L G+ SL L+L A IT
Sbjct: 23 LKRLAIENTRVGDAGMAQLASHPGIAELDLHGTKITDAGLKPLKGMKSLVHLSLRATGIT 82
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL---------RSLEICGGGLTDAG 412
D GLA L + L LDL +I+D+G +L+ K L RS+ I G G
Sbjct: 83 DAGLAHLAGMDRLERLDLGYTKISDAGIEHLKGLKGLDIVETNVTDRSIPIIG------G 136
Query: 413 LTGLVSLNVSNSRITSAGLRHLKPL 437
L ++N S+IT AG L+ +
Sbjct: 137 FERLEAINPRGSKITEAGEEQLRKM 161
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
L+ L +++ +GD G+ L + L+L T++ +GL+ L G+ +L ++L TGI+
Sbjct: 23 LKRLAIENTRVGDAGMAQLASHPGIAELDLHGTKITDAGLKPLKGMKSLVHLSLRATGIT 82
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
D L LAG+ L+ L+L +I+D G+ L L G LD+ +TD + F+
Sbjct: 83 DAGLAHLAGMDRLERLDLGYTKISDAGIEHLKGLKG---LDIVETNVTDRSIPIIGGFER 139
Query: 398 LRSLEICGGGLTDAG 412
L ++ G +T+AG
Sbjct: 140 LEAINPRGSKITEAG 154
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 350 LKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLT 409
LK L ++ ++ D G+A L S G+ LDL G +ITD+G L+ K+L L + G+T
Sbjct: 23 LKRLAIENTRVGDAGMAQLASHPGIAELDLHGTKITDAGLKPLKGMKSLVHLSLRATGIT 82
Query: 410 DAGLTGLVS------LNVSNSRITSAGLRHLKPLKNL 440
DAGL L L++ ++I+ AG+ HLK LK L
Sbjct: 83 DAGLAHLAGMDRLERLDLGYTKISDAGIEHLKGLKGL 119
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 3/139 (2%)
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
LK L I ++V D+G+A L + L+L G +T A L L + SL +L+L ++
Sbjct: 23 LKRLAIENTRVGDAGMAQLASHPGIAELDLHGTKITDAGLKPLKGMKSLVHLSLRATGIT 82
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
D G + + L+ L+LG+ +I+D + HLKG L+ L++ + D + + G
Sbjct: 83 DAGLAHLAGMDRLERLDLGYTKISDAGIEHLKG---LKGLDIVETNVTDRSIPIIGGFER 139
Query: 302 LKCLELSDTQVGSSGLRHL 320
L+ + +++ +G L
Sbjct: 140 LEAINPRGSKITEAGEEQL 158
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
+ D+ M L+ + L + +K+TD+G+ LKG++ L L+L +T A L L+ +
Sbjct: 33 VGDAGMAQLASHPGIAELDLHGTKITDAGLKPLKGMKSLVHLSLRATGITDAGLAHLAGM 92
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
L L+L ++SD G E LK L++ +TD + + G LE++N
Sbjct: 93 DRLERLDLGYTKISDAGIEHLK---GLKGLDIVETNVTDRSIPIIGGFERLEAINPRGSK 149
Query: 288 IGDEG 292
I + G
Sbjct: 150 ITEAG 154
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 14/160 (8%)
Query: 77 LKDCSNLQSLDFNFCI---------QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
L+ C N + + + ++ D G+ L + L IT G+K
Sbjct: 7 LQGCPNANGIRLSAVVLKRLAIENTRVGDAGMAQLASHPGIAELDLH-GTKITDAGLKPL 65
Query: 128 AGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
G+ +LV L L GL +L G+ +LE L++ + I+D+ ++ L G LK L I
Sbjct: 66 KGMKSLVHLSLRATGITDAGLAHLAGMDRLERLDLGYTK-ISDAGIEHLKG---LKGLDI 121
Query: 188 SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
+ VTD I + G ++L +N G +T A + L +
Sbjct: 122 VETNVTDRSIPIIGGFERLEAINPRGSKITEAGEEQLRKM 161
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
N + GM A + +LDL GL LKG+ L L+++ ITD+ +
Sbjct: 30 NTRVGDAGMAQLASHPGIAELDLHGTKITDAGLKPLKGMKSLVHLSLR-ATGITDAGLAH 88
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L+G+ L+ L + +K++D+GI +LKGL+ L ++ VT + + L +N
Sbjct: 89 LAGMDRLERLDLGYTKISDAGIEHLKGLKGLDIVETN---VTDRSIPIIGGFERLEAINP 145
Query: 236 NRCQLSDDGCEKFSKI 251
++++ G E+ K+
Sbjct: 146 RGSKITEAGEEQLRKM 161
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 14/82 (17%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGL-------SNLT 109
SL+ + L + +TD+GL HL L+ LD + +ISD G+EHL+GL +N+T
Sbjct: 69 KSLVHLSLRATGITDAGLAHLAGMDRLERLDLGYT-KISDAGIEHLKGLKGLDIVETNVT 127
Query: 110 SLS------FRRNNAITAQGMK 125
S F R AI +G K
Sbjct: 128 DRSIPIIGGFERLEAINPRGSK 149
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
V D M +AS + +DL G+ +TD+ GL+ L+
Sbjct: 33 VGDAGMAQLASH-PGIAELDLHGTKITDA-------------------------GLKPLK 66
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
G+ +L LS R IT G+ AG+ L +LDL G+ +LKG L+ L+I
Sbjct: 67 GMKSLVHLSL-RATGITDAGLAHLAGMDRLERLDLGYTKISDAGIEHLKG---LKGLDIV 122
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLK 201
N +TD + + G L+++ SK+T++G L+
Sbjct: 123 ETN-VTDRSIPIIGGFERLEAINPRGSKITEAGEEQLR 159
>gi|167523190|ref|XP_001745932.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775733|gb|EDQ89356.1| predicted protein [Monosiga brevicollis MX1]
Length = 2039
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 137/347 (39%), Gaps = 57/347 (16%)
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
RNN IT+ AF L+NL LDLE + GL +L SL +K I + +
Sbjct: 436 RNNPITSLAGSAFVELLNLQTLDLEDSSLTTLPAQAFAGLSRLTSLALKSRAKIANMAVN 495
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
GL L L +S + + I GL LT L+L
Sbjct: 496 AFVGLDRLPELDLSNQAIQEIDIGMFSGLTSLTKLDLSNN-------------------R 536
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD---- 290
LN Q F+ + +L LN N +GLT L +LNL C +
Sbjct: 537 LNTIQ-----STAFNPLENLSALNFAGNPFNGVAASAFRGLTQLTALNLSHCNVSTLIGG 591
Query: 291 --EGLVNLT------------------GLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
E L +T GL L L+LS+ ++ + +GL L ++
Sbjct: 592 TFETLSRVTSLDLSGIKLRTLPSQAFAGLSALPELDLSNMRITTVAGNAFAGLDALTTLK 651
Query: 331 LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
L I+ A L +LK+LNL ++ +L L +L L G ++ GA+
Sbjct: 652 LLGNPITTIESSAFANLPALKALNLSHLGLSVLPANTFVNLPALQNLTLTGNQLATLGAS 711
Query: 391 YLRNF---KNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITS 428
F +RSL++ LT +GLTGL SLN+ N+ ITS
Sbjct: 712 NQPAFVACPRIRSLDLSMQKLTAITAHAFSGLTGLTSLNLRNNLITS 758
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 177/449 (39%), Gaps = 70/449 (15%)
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL--E 139
NLQ+LD ++ + GLS LTSL+ + I + AF GL L +LDL +
Sbjct: 453 NLQTLDLEDS-SLTTLPAQAFAGLSRLTSLALKSRAKIANMAVNAFVGLDRLPELDLSNQ 511
Query: 140 RCTRIHGGLVN-LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIA 198
I G+ + L L KL+ N + N I + PL NL +L + + +
Sbjct: 512 AIQEIDIGMFSGLTSLTKLDLSNNR-LNTIQSTAFNPLE---NLSALNFAGNPFNGVAAS 567
Query: 199 YLKGLQKLTLLNLEGCPVT------------AACLD------------SLSALGSLFYLN 234
+GL +LT LNL C V+ LD + + L +L L+
Sbjct: 568 AFRGLTQLTALNLSHCNVSTLIGGTFETLSRVTSLDLSGIKLRTLPSQAFAGLSALPELD 627
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG---DE 291
L+ +++ F+ + +L L L N IT L L++LNL G+
Sbjct: 628 LSNMRITTVAGNAFAGLDALTTLKLLGNPITTIESSAFANLPALKALNLSHLGLSVLPAN 687
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
VNL L NL +G+S + S++LS ++ + +GL+ L
Sbjct: 688 TFVNLPALQNLTLTGNQLATLGASNQPAFVACPRIRSLDLSMQKLTAITAHAFSGLTGLT 747
Query: 352 SLNLDARQITDTGLAALTSLTG---------------------------LTHLDLFGARI 384
SLNL IT A +L+ +T LD+ ++
Sbjct: 748 SLNLRNNLITSLATGAFANLSAELASNAPSTLAHVLYLLVCFAALIKCQVTQLDIRNNKL 807
Query: 385 TDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLK 438
T ++ L+SL + +T +GL L L + + + G L PL
Sbjct: 808 TALASSSFDGLSALQSLSLANMAITKLPLGVFSGLNALQVLRLDGTGVQEIGAMVLAPLS 867
Query: 439 NLRSLTLESCKVTANDIKRLQSRDLPNLV 467
L +L L S ++T K L S+ P+L+
Sbjct: 868 QLSTLWLNSSQLTTITTKWLASK--PHLM 894
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 169/407 (41%), Gaps = 32/407 (7%)
Query: 80 CSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGL-INLVKLDL 138
C ++SLD + +++ GL+ LTSL+ R NN IT+ AFA L L
Sbjct: 719 CPRIRSLDLSMQ-KLTAITAHAFSGLTGLTSLNLR-NNLITSLATGAFANLSAELASNAP 776
Query: 139 ERCTRIHGGLVNLKGLMK--LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSG 196
+ LV L+K + L+I+ N +T GL+ L+SL ++ +T
Sbjct: 777 STLAHVLYLLVCFAALIKCQVTQLDIR-NNKLTALASSSFDGLSALQSLSLANMAITKLP 835
Query: 197 IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 256
+ GL L +L L+G V L+ L L L LN QL+ + + L
Sbjct: 836 LGVFSGLNALQVLRLDGTGVQEIGAMVLAPLSQLSTLWLNSSQLTTITTKWLASKPHLMQ 895
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG-----LCNLKCLELSDTQ 311
++L ++ + L LE++NLD+ L + G L L+ L +S
Sbjct: 896 VDLSHTQLQKVPTFAFEDLPALEAINLDNTA----ALTTVEGSAFANLPRLQSLVVSGGS 951
Query: 312 VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 371
+ + L +L ++ +S ++ AG S L++L+L I+D G A L
Sbjct: 952 LETWASNALVDCPSLTTLTISHQRLAALPTEAFAGASGLQALDLSYNNISDIGKNAFVGL 1011
Query: 372 TGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLT--------DAGLTGLVSLNVSN 423
LT L + G I + +++L++ T + G V+L S
Sbjct: 1012 NNLTQLHIEGNPIAVLEEGAFAGLRRVQALDLAATAFTILPTNVFANMSALGQVTLPASL 1071
Query: 424 SRITSAGLRHLKPLKNLRSLTLESCKVTA------NDIKRLQSRDLP 464
+ + S L HL P+ L S+ K++A D+ RL + LP
Sbjct: 1072 ATLQSNALAHL-PM--LASVDFSHTKLSALPEYSLVDLPRLTTVALP 1115
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 163/427 (38%), Gaps = 84/427 (19%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+++ SGLIHL D + GLS++TSL NA+ G AF
Sbjct: 1495 NLSHSGLIHLPD--------------------QAFEGLSHVTSLDLS-GNALQWVGQAAF 1533
Query: 128 AGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
G++ L LDL + G ++ L KL SL K + L L L +L +
Sbjct: 1534 QGMVALTTLDLSDTQLLALGNASVAHLPKLTSL--KLPTTLRQLASAALLDLPQLATLDL 1591
Query: 188 SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEK 247
S ++V L L KL DSL SL L GC
Sbjct: 1592 SATQVQQLASGALSNLAKL---------------DSLIVSPSLETLV--------PGC-- 1626
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL 307
F+ + + L+L ++ L GL LE++NL + G + G +L ++L
Sbjct: 1627 FTNMTGVTSLDLAGTQLAQLEAQVLTGLPALETINLSVSAVRTLGPLAFAGPTSLSAVDL 1686
Query: 308 SDTQV----------------------GSSGL-------RHLSGLTNLESINLSFTGISD 338
S+T + S+G+ GL++L +++LS I+
Sbjct: 1687 SNTMIEAWTTNNASQGPFSKSTAIVSLSSAGMVLKTLTPHGFDGLSHLSAMDLSAADITS 1746
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 398
AGLS++ +L L+ ++T G T L L LDL A + A+ L
Sbjct: 1747 IPALAFAGLSNVTALLLNVSRLTQLGSQGFTGLNHLLTLDLSNAPLATLPASGFAGLTTL 1806
Query: 399 RSLEICGGGLTDAGLTGLVSLNV-------SNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
++L + G +T LNV S +++ K + L+ L L ++T
Sbjct: 1807 QTLNMSGAHVTALPADAFQGLNVQLKDLDLSGNKLARLEAAAFKAVSGLQRLYLSGNQIT 1866
Query: 452 ANDIKRL 458
D + L
Sbjct: 1867 QVDAQAL 1873
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 164/446 (36%), Gaps = 102/446 (22%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L ++DL S +T S L SL +I++ + GL L L N A
Sbjct: 454 LQTLDLEDSSLTTLPAQAFAGLSRLTSLALKSRAKIANMAVNAFVGLDRLPELDLS-NQA 512
Query: 119 ITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVN----------------------LKGL 154
I + F+GL +L KLDL R I N +GL
Sbjct: 513 IQEIDIGMFSGLTSLTKLDLSNNRLNTIQSTAFNPLENLSALNFAGNPFNGVAASAFRGL 572
Query: 155 MKLESLNIKWCNC-------------ITDSDM----------KPLSGLTNLKSLQISCSK 191
+L +LN+ CN +T D+ + +GL+ L L +S +
Sbjct: 573 TQLTALNLSHCNVSTLIGGTFETLSRVTSLDLSGIKLRTLPSQAFAGLSALPELDLSNMR 632
Query: 192 VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI 251
+T GL LT L L G P+T + + L +L LNL+ LS F +
Sbjct: 633 ITTVAGNAFAGLDALTTLKLLGNPITTIESSAFANLPALKALNLSHLGLSVLPANTFVNL 692
Query: 252 GSL---------------------------KVLNLGFNEITDECLVHLKGLTNLESLNLD 284
+L + L+L ++T GLT L SLNL
Sbjct: 693 PALQNLTLTGNQLATLGASNQPAFVACPRIRSLDLSMQKLTAITAHAFSGLTGLTSLNLR 752
Query: 285 S---CGIGDEGLVNLTG------------------------LCNLKCLELSDTQVGSSGL 317
+ + NL+ C + L++ + ++ +
Sbjct: 753 NNLITSLATGAFANLSAELASNAPSTLAHVLYLLVCFAALIKCQVTQLDIRNNKLTALAS 812
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
GL+ L+S++L+ I+ L +GL++L+ L LD + + G L L+ L+ L
Sbjct: 813 SSFDGLSALQSLSLANMAITKLPLGVFSGLNALQVLRLDGTGVQEIGAMVLAPLSQLSTL 872
Query: 378 DLFGARITDSGAAYLRNFKNLRSLEI 403
L +++T +L + +L +++
Sbjct: 873 WLNSSQLTTITTKWLASKPHLMQVDL 898
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 157/369 (42%), Gaps = 46/369 (12%)
Query: 47 KWMDVIASQG-SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI-QISDGGLEHLRG 104
+W+ A QG +L ++DLS + + G + L SL + Q++ L L
Sbjct: 1526 QWVGQAAFQGMVALTTLDLSDTQLLALGNASVAHLPKLTSLKLPTTLRQLASAALLDLPQ 1585
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINL-VKLDLERCTRIHGGLVNLKGLMKLESLNIK 163
L+ L LS + + + + A L +L V LE T + G N+ G+ L+ +
Sbjct: 1586 LATL-DLSATQVQQLASGALSNLAKLDSLIVSPSLE--TLVPGCFTNMTGVTSLDLAGTQ 1642
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
+ + L+GL L+++ +S S V G G L+ ++L + A ++
Sbjct: 1643 LAQL----EAQVLTGLPALETINLSVSAVRTLGPLAFAGPTSLSAVDLSNTMIEAWTTNN 1698
Query: 224 LS--------ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
S A+ SL + L+ G F + L ++L +IT + GL
Sbjct: 1699 ASQGPFSKSTAIVSLSSAGMVLKTLTPHG---FDGLSHLSAMDLSAADITSIPALAFAGL 1755
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS--- 332
+N+ +L L+ + G TGL +L L+LS+ + + +GLT L+++N+S
Sbjct: 1756 SNVTALLLNVSRLTQLGSQGFTGLNHLLTLDLSNAPLATLPASGFAGLTTLQTLNMSGAH 1815
Query: 333 --------FTGIS------DGSLRKLA--------GLSSLKSLNLDARQITDTGLAALTS 370
F G++ D S KLA +S L+ L L QIT AL
Sbjct: 1816 VTALPADAFQGLNVQLKDLDLSGNKLARLEAAAFKAVSGLQRLYLSGNQITQVDAQALGG 1875
Query: 371 LTGLTHLDL 379
L+ L HLDL
Sbjct: 1876 LSTLIHLDL 1884
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 137/325 (42%), Gaps = 12/325 (3%)
Query: 83 LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL--ER 140
L+SLD ++ E L GL+N T L +T+ G A A L K+DL +
Sbjct: 1252 LRSLDLRHT-KVKALPTEALSGLTNFTQLQLAPAQ-LTSWGSNAIAQCPALTKVDLAGQA 1309
Query: 141 CTRIHG-GLVNLKGLMKLE-SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIA 198
TRI NL ++ ++ S N+ +T + G + SLQ+ + +T+
Sbjct: 1310 LTRIPASAFANLSHVVTIDLSDNL----VLTTIEAGAFVGTKQVTSLQLVHTPLTNLTNG 1365
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN 258
L TL +L +T D++S L +L L L L+ + F + L ++
Sbjct: 1366 SFTTLGVATL-DLSDAKLTQLPGDAVSQLPALTSLQLPST-LNVLDSDAFHALPKLVTVD 1423
Query: 259 LGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
L ++ + L L+S+ L + + + + L L LS + S
Sbjct: 1424 LRPTSVSHLPTGAFRDLPALQSIQLRGQQLTALDSMVWSAVPRLTALNLSQQALVSVAPA 1483
Query: 319 HLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 378
GL +L +NLS +G+ + GLS + SL+L + G AA + LT LD
Sbjct: 1484 PFVGLASLTQLNLSHSGLIHLPDQAFEGLSHVTSLDLSGNALQWVGQAAFQGMVALTTLD 1543
Query: 379 LFGARITDSGAAYLRNFKNLRSLEI 403
L ++ G A + + L SL++
Sbjct: 1544 LSDTQLLALGNASVAHLPKLTSLKL 1568
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 122/547 (22%), Positives = 204/547 (37%), Gaps = 103/547 (18%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLS 61
LP ++ N L + L V + AL + L P L +
Sbjct: 1067 LPASLATLQSNALAHLPMLASVDFSHTKLSALPEYSLVDLP---------------RLTT 1111
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
V L + +T L DC L SLD + Q++ L G ++L +L+ N+ + A
Sbjct: 1112 VALPPNRLTAVAANALSDCPGLLSLDLS-NQQLTTLETNFLIGATHLQALNLSHNSKLEA 1170
Query: 122 QGMKAFAGLIN----------LVKLDLE-----RCTRIHGGLVNL-----KGLMKLESL- 160
+AFAGL L L L R T + L + L L L
Sbjct: 1171 VQSEAFAGLTRLTTLDLTGVVLTSLALHAFSYLRITNLDLSTTQLADLPTEALWNLPELA 1230
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC 220
++ +T + + L L+SL + +KV L GL T L L +T+
Sbjct: 1231 AVQLPATLTTLNKRSFYQLPALRSLDLRHTKVKALPTEALSGLTNFTQLQLAPAQLTSWG 1290
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL---------------GFNEIT 265
++++ +L ++L L+ F+ + + ++L G ++T
Sbjct: 1291 SNAIAQCPALTKVDLAGQALTRIPASAFANLSHVVTIDLSDNLVLTTIEAGAFVGTKQVT 1350
Query: 266 DECLVH--LKGLTN--LESLNLDSCGIGDEGLVNLTG-----LCNLKCLELSDT-QVGSS 315
LVH L LTN +L + + + D L L G L L L+L T V S
Sbjct: 1351 SLQLVHTPLTNLTNGSFTTLGVATLDLSDAKLTQLPGDAVSQLPALTSLQLPSTLNVLDS 1410
Query: 316 GLRHLSGLTNLESINLSFTGISD---GSLRKLAGLSSLK--------------------- 351
H L L +++L T +S G+ R L L S++
Sbjct: 1411 DAFH--ALPKLVTVDLRPTSVSHLPTGAFRDLPALQSIQLRGQQLTALDSMVWSAVPRLT 1468
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL--- 408
+LNL + + A L LT L+L + + ++ SL++ G L
Sbjct: 1469 ALNLSQQALVSVAPAPFVGLASLTQLNLSHSGLIHLPDQAFEGLSHVTSLDLSGNALQWV 1528
Query: 409 ---TDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSR---D 462
G+ L +L++S++++ + G + L L SL L + +++L S D
Sbjct: 1529 GQAAFQGMVALTTLDLSDTQLLALGNASVAHLPKLTSLKLPTT------LRQLASAALLD 1582
Query: 463 LPNLVSF 469
LP L +
Sbjct: 1583 LPQLATL 1589
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 158/409 (38%), Gaps = 48/409 (11%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG------ 146
Q++D E L L L ++ +T ++F L L LDL R T++
Sbjct: 1214 QLADLPTEALWNLPELAAVQLPAT--LTTLNKRSFYQLPALRSLDL-RHTKVKALPTEAL 1270
Query: 147 -GLVNLKGLMKLESLNIKW-------CNCITDSDMK-------PLSGLTNLKSL-QISCS 190
GL N L + W C +T D+ P S NL + I S
Sbjct: 1271 SGLTNFTQLQLAPAQLTSWGSNAIAQCPALTKVDLAGQALTRIPASAFANLSHVVTIDLS 1330
Query: 191 K---VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEK 247
+T G +++T L L P+T S + LG + L+L+ +L+ +
Sbjct: 1331 DNLVLTTIEAGAFVGTKQVTSLQLVHTPLTNLTNGSFTTLG-VATLDLSDAKLTQLPGDA 1389
Query: 248 FSKIGSLKVLNLGFN-EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE 306
S++ +L L L + D H L L +++L + L L+ ++
Sbjct: 1390 VSQLPALTSLQLPSTLNVLDSDAFH--ALPKLVTVDLRPTSVSHLPTGAFRDLPALQSIQ 1447
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA 366
L Q+ + S + L ++NLS + + GL+SL LNL +
Sbjct: 1448 LRGQQLTALDSMVWSAVPRLTALNLSQQALVSVAPAPFVGLASLTQLNLSHSGLIHLPDQ 1507
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG------GGLTDAGLTGLVSLN 420
A L+ +T LDL G + G A + L +L++ G + A L L SL
Sbjct: 1508 AFEGLSHVTSLDLSGNALQWVGQAAFQGMVALTTLDLSDTQLLALGNASVAHLPKLTSLK 1567
Query: 421 VSNS--RITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLV 467
+ + ++ SA L L L L ++A +++L S L NL
Sbjct: 1568 LPTTLRQLASAALLDLPQLATL--------DLSATQVQQLASGALSNLA 1608
>gi|300867094|ref|ZP_07111761.1| Leucine Rich Repeat domain protein (fragment) [Oscillatoria sp. PCC
6506]
gi|300334925|emb|CBN56927.1| Leucine Rich Repeat domain protein (fragment) [Oscillatoria sp. PCC
6506]
Length = 334
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 136/282 (48%), Gaps = 46/282 (16%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
+ LS+LT+L + NN I+ +K L NL LDL + ++K L L LN+
Sbjct: 81 QTLSSLTAL-YLYNNQIS--DLKPLQSLTNLTWLDLN-----DNQISDIKPLQSLTKLNV 132
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
+ SD+KPL LTNL SL + +K++D +K L+ LT L+L
Sbjct: 133 LILHSNKISDIKPLESLTNLTSLSLYSNKISD-----IKPLESLTNLDL----------- 176
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
L L+ ++SD + + L +L L N+I D + L+ LTNL SL+
Sbjct: 177 ----------LELHNNKISD--IKPLQSLTKLNLLQLHNNQIGD--IKPLQSLTNLTSLS 222
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
L S I D L L L NL L+LS+ ++ S ++ L LT L ++LS ISD +
Sbjct: 223 LYSNKISDITL--LQSLTNLTILDLSNNKI--SDIKPLEFLTKLNILDLSNNKISD--IE 276
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI 384
L L+ L L L QI+D + L SLT L L L G I
Sbjct: 277 PLQSLTKLTILYLYNNQISD--IKTLKSLTKLMLLYLGGNSI 316
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 117/228 (51%), Gaps = 26/228 (11%)
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
L L +L +L +L+LN Q+SD + + L VL L N+I+D + L+ LTNL S
Sbjct: 99 LKPLQSLTNLTWLDLNDNQISD--IKPLQSLTKLNVLILHSNKISD--IKPLESLTNLTS 154
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
L+L S I D + L L NL LEL + ++ S ++ L LT L + L I G
Sbjct: 155 LSLYSNKISD--IKPLESLTNLDLLELHNNKI--SDIKPLQSLTKLNLLQLHNNQI--GD 208
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRS 400
++ L L++L SL+L + +I+D L L SLT LT LDL +I+D L L
Sbjct: 209 IKPLQSLTNLTSLSLYSNKISDITL--LQSLTNLTILDLSNNKISDIKP--LEFLTKLNI 264
Query: 401 LEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
L++ ++D LT L L + N++I+ +K L+SLT
Sbjct: 265 LDLSNNKISDIEPLQSLTKLTILYLYNNQISD--------IKTLKSLT 304
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 116/243 (47%), Gaps = 33/243 (13%)
Query: 63 DLSGSDVTDSGLIHLKDCSNLQSL-DFNFCI----QISDGGLEHLRGLSNLTSLSFRRNN 117
+L+ D+ D+ + D LQSL N I +ISD ++ L L+NLTSLS N
Sbjct: 107 NLTWLDLNDN---QISDIKPLQSLTKLNVLILHSNKISD--IKPLESLTNLTSLSLYSNK 161
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS 177
+K L NL L+L + + ++K L L LN+ + D+KPL
Sbjct: 162 ---ISDIKPLESLTNLDLLELH-----NNKISDIKPLQSLTKLNLLQLHNNQIGDIKPLQ 213
Query: 178 GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
LTNL SL + +K++D I L+ L LT+L+L ++ + L L L L+L+
Sbjct: 214 SLTNLTSLSLYSNKISD--ITLLQSLTNLTILDLSNNKISD--IKPLEFLTKLNILDLSN 269
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL-------ESLNLDSCGIGD 290
++SD E + L +L L N+I+D + LK LT L S++ +C +
Sbjct: 270 NKISD--IEPLQSLTKLTILYLYNNQISD--IKTLKSLTKLMLLYLGGNSIDTKTCPLSP 325
Query: 291 EGL 293
E +
Sbjct: 326 ESI 328
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 22/187 (11%)
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
LE C ++ L +LT L L + Q+ S L+ L LTNL ++L+ IS
Sbjct: 68 LEKAETTECEAANQTLSSLTALY------LYNNQI--SDLKPLQSLTNLTWLDLNDNQIS 119
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
D ++ L L+ L L L + +I+D + L SLT LT L L+ +I+D L + N
Sbjct: 120 D--IKPLQSLTKLNVLILHSNKISD--IKPLESLTNLTSLSLYSNKISDIKP--LESLTN 173
Query: 398 LRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTAN 453
L LE+ ++D LT L L + N++I ++ L+ L NL SL+L S K++
Sbjct: 174 LDLLELHNNKISDIKPLQSLTKLNLLQLHNNQI--GDIKPLQSLTNLTSLSLYSNKIS-- 229
Query: 454 DIKRLQS 460
DI LQS
Sbjct: 230 DITLLQS 236
>gi|451982090|ref|ZP_21930421.1| exproted hypothetical protein [Nitrospina gracilis 3/211]
gi|451760644|emb|CCQ91701.1| exproted hypothetical protein [Nitrospina gracilis 3/211]
Length = 323
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV-- 256
YL LQ L L N P AA L S + L +LNL Q+ G E + +LK
Sbjct: 94 YLPNLQTLNLFNNRIGPEGAAALASSNKYPHLSHLNLWGNQIGPSGAEALANSDTLKALE 153
Query: 257 -LNLGFNEITDECLVHLKGLTNLES---LNLDSCGIGDEGLVNLTG---LCNLKCLELSD 309
L+L N I D L+ L LE L LD G+GD GL L L NL+ L LS
Sbjct: 154 YLDLSGNGIGDPGLIALARSPVLERIRILRLDKNGVGDRGLAALASSPYLGNLEVLSLSH 213
Query: 310 TQVGSSGLRHLSG---LTNLESINLSFTGISDGSLRKLA---GLSSLKSLNLDARQITDT 363
++G G + L+ + L + L I D ++ LA +L+ L+L IT+T
Sbjct: 214 NEIGQEGAKVLAESPYIRKLRQLRLERNRIGDVGVKHLAESEAFQNLEELDLQWNGITET 273
Query: 364 G---LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
G LA LT L L L+G I ++G ++ NL+++
Sbjct: 274 GAHDLAGSPVLTRLNRLYLWGNEIGNAGVRAIKKSDNLKNV 314
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 122/285 (42%), Gaps = 58/285 (20%)
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS------KIGSLKVLNLGFNEITDECL 269
+ A L L G+ LN + L DDG + + K+ +L + + GF + L
Sbjct: 31 INAIILKELKQNGTHLKLNFS-GMLGDDGVRQLARSRLLKKVETLDLNSHGFGNAGAQGL 89
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTG---LCNLKCLELSDTQVGSSGLRHLSG---L 323
K L NL++LNL + IG EG L +L L L Q+G SG L+ L
Sbjct: 90 ADSKYLPNLQTLNLFNNRIGPEGAAALASSNKYPHLSHLNLWGNQIGPSGAEALANSDTL 149
Query: 324 TNLESINLSFTGISDGSLRKLAG---LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
LE ++LS GI D L LA L ++ L LD + D GLAAL S L +L++
Sbjct: 150 KALEYLDLSGNGIGDPGLIALARSPVLERIRILRLDKNGVGDRGLAALASSPYLGNLEVL 209
Query: 381 ----------GA--------------------RITDSGAAYL---RNFKNLRSLEICGGG 407
GA RI D G +L F+NL L++ G
Sbjct: 210 SLSHNEIGQEGAKVLAESPYIRKLRQLRLERNRIGDVGVKHLAESEAFQNLEELDLQWNG 269
Query: 408 LTDAG---------LTGLVSLNVSNSRITSAGLRHLKPLKNLRSL 443
+T+ G LT L L + + I +AG+R +K NL+++
Sbjct: 270 ITETGAHDLAGSPVLTRLNRLYLWGNEIGNAGVRAIKKSDNLKNV 314
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 34/191 (17%)
Query: 40 QYPGVN--DKWMDVIASQGSSLLS----------VDLSGSDVTDSGLIHLKDCSNLQ--- 84
+YP ++ + W + I G+ L+ +DLSG+ + D GLI L L+
Sbjct: 121 KYPHLSHLNLWGNQIGPSGAEALANSDTLKALEYLDLSGNGIGDPGLIALARSPVLERIR 180
Query: 85 --SLDFNFCIQISDGGLEHLRG---LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE 139
LD N + D GL L L NL LS +N I +G K A + KL
Sbjct: 181 ILRLDKN---GVGDRGLAALASSPYLGNLEVLSL-SHNEIGQEGAKVLAESPYIRKLRQL 236
Query: 140 RCTRIHGGLVNLKGLMK------LESLNIKWCNCITDSDMKPLSG---LTNLKSLQISCS 190
R R G V +K L + LE L+++W N IT++ L+G LT L L + +
Sbjct: 237 RLERNRIGDVGVKHLAESEAFQNLEELDLQW-NGITETGAHDLAGSPVLTRLNRLYLWGN 295
Query: 191 KVTDSGIAYLK 201
++ ++G+ +K
Sbjct: 296 EIGNAGVRAIK 306
>gi|28555894|emb|CAD45029.1| NBS-LRR disease resistance protein homologue [Hordeum vulgare]
Length = 1262
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 171/397 (43%), Gaps = 33/397 (8%)
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC 141
NLQ+LDF+ C ++ + E L GL+NL +L + + + +K+ L NL LDL C
Sbjct: 827 NLQTLDFSVCHKL-ESVPESLGGLNNLQTLKLSVCDNLVSL-LKSLGSLKNLQTLDLSGC 884
Query: 142 TRIH------GGLVNLKGL-----MKLESL-------------NIKWCNCITDSDMKPLS 177
++ G L NL+ L KLESL NI WC + K L
Sbjct: 885 KKLESLPESLGSLENLQILNLSNCFKLESLPESLGRLKNLQTLNISWCTELVFLP-KNLG 943
Query: 178 GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
L NL L +S +S L L+ L LNL C + +SL L +L L+L
Sbjct: 944 NLKNLPRLDLSGCMKLESLPDSLGSLENLETLNLSKCFKLESLPESLGGLQNLQTLDLLV 1003
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
C + E + +L+ L L F + L GL NL++L L C + +L
Sbjct: 1004 CHKLESLPESLGGLKNLQTLQLSFCHKLESLPESLGGLKNLQTLTLSVCDKLESLPESLG 1063
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA 357
L NL L+L S L + NL ++NLS + + L +L+ LNL
Sbjct: 1064 SLKNLHTLKLQVCYKLKSLPESLGSIKNLHTLNLSVCHNLESIPESVGSLENLQILNLSN 1123
Query: 358 RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG----GGLTDA-- 411
++ +L SL L L L S L N KNL++L++ G L D+
Sbjct: 1124 CFKLESIPKSLGSLKNLQTLILSWCTRLVSLPKNLGNLKNLQTLDLSGCKKLESLPDSLG 1183
Query: 412 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
L L +LN+SN + L LK L++L L C
Sbjct: 1184 SLENLQTLNLSNCFKLESLPEILGSLKKLQTLNLFRC 1220
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 173/382 (45%), Gaps = 25/382 (6%)
Query: 44 VNDKWMDVIASQGS--SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQI-----SD 96
V D + ++ S GS +L ++DLSG +S L NLQ L+ + C ++ S
Sbjct: 859 VCDNLVSLLKSLGSLKNLQTLDLSGCKKLESLPESLGSLENLQILNLSNCFKLESLPESL 918
Query: 97 GGLEHLRGL--SNLTSLSFRRNNAITAQGMK---------------AFAGLINLVKLDLE 139
G L++L+ L S T L F N + + + L NL L+L
Sbjct: 919 GRLKNLQTLNISWCTELVFLPKNLGNLKNLPRLDLSGCMKLESLPDSLGSLENLETLNLS 978
Query: 140 RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY 199
+C ++ +L GL L++L++ C+ + +S + L GL NL++LQ+S +S
Sbjct: 979 KCFKLESLPESLGGLQNLQTLDLLVCHKL-ESLPESLGGLKNLQTLQLSFCHKLESLPES 1037
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
L GL+ L L L C + +SL +L +L L L C E I +L LNL
Sbjct: 1038 LGGLKNLQTLTLSVCDKLESLPESLGSLKNLHTLKLQVCYKLKSLPESLGSIKNLHTLNL 1097
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
+ + L NL+ LNL +C + +L L NL+ L LS S ++
Sbjct: 1098 SVCHNLESIPESVGSLENLQILNLSNCFKLESIPKSLGSLKNLQTLILSWCTRLVSLPKN 1157
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
L L NL++++LS + L L +L++LNL ++ L SL L L+L
Sbjct: 1158 LGNLKNLQTLDLSGCKKLESLPDSLGSLENLQTLNLSNCFKLESLPEILGSLKKLQTLNL 1217
Query: 380 FGARITDSGAAYLRNFKNLRSL 401
F +S L + K+L++L
Sbjct: 1218 FRCGKLESLPESLGSLKHLQTL 1239
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 177/394 (44%), Gaps = 13/394 (3%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGL-EHLRGLSNLTSLSFRRNNAIT 120
+DLSG + D L+ L+ ++ D E + LS L L+ + I
Sbjct: 569 LDLSGCSIKDFA----SALGQLKQLEVLIAQKLQDRQFPESITRLSKLHYLNLSGSRGI- 623
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
++ + L++LV LDL CT + L L L++L++ WC + +S + L +
Sbjct: 624 SEIPSSVGKLVSLVHLDLSYCTNVKVIPKALGILRNLQTLDLSWCEKL-ESLPESLGSVQ 682
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
NL+ L +S ++ L L+ + L+L C + +SL +L ++ L+L+RC
Sbjct: 683 NLQRLNLSNCFELEALPESLGSLKDVQTLDLSSCYKLESLPESLGSLKNVQTLDLSRCYK 742
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
+ ++ +L+ ++L + + L NL+ LNL +C + + L
Sbjct: 743 LVSLPKNLGRLKNLRTIDLSGCKKLETFPESFGSLENLQILNLSNCFELESLPESFGSLK 802
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
NL+ L L + + S L GL NL++++ S + L GL++L++L L
Sbjct: 803 NLQTLNLVECKKLESLPESLGGLKNLQTLDFSVCHKLESVPESLGGLNNLQTLKLSVCDN 862
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG----GGLTDA--GLT 414
+ L +L SL L LDL G + +S L + +NL+ L + L ++ L
Sbjct: 863 LVSLLKSLGSLKNLQTLDLSGCKKLESLPESLGSLENLQILNLSNCFKLESLPESLGRLK 922
Query: 415 GLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
L +LN+S ++L LKNL L L C
Sbjct: 923 NLQTLNISWCTELVFLPKNLGNLKNLPRLDLSGC 956
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 169/374 (45%), Gaps = 11/374 (2%)
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM-KAFAGLINLVKLDLER 140
NLQ+LD ++C ++ + E L + NL L+ +N + + ++ L ++ LDL
Sbjct: 659 NLQTLDLSWCEKL-ESLPESLGSVQNLQRLNL--SNCFELEALPESLGSLKDVQTLDLSS 715
Query: 141 CTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYL 200
C ++ +L L +++L++ C + S K L L NL+++ +S K ++
Sbjct: 716 CYKLESLPESLGSLKNVQTLDLSRCYKLV-SLPKNLGRLKNLRTIDLSGCKKLETFPESF 774
Query: 201 KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG 260
L+ L +LNL C + +S +L +L LNL C+ + E + +L+ L+
Sbjct: 775 GSLENLQILNLSNCFELESLPESFGSLKNLQTLNLVECKKLESLPESLGGLKNLQTLDFS 834
Query: 261 FNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
+ L GL NL++L L C L +L L NL+ L+LS + S L
Sbjct: 835 VCHKLESVPESLGGLNNLQTLKLSVCDNLVSLLKSLGSLKNLQTLDLSGCKKLESLPESL 894
Query: 321 SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
L NL+ +NLS + L L +L++LN+ L +L L LDL
Sbjct: 895 GSLENLQILNLSNCFKLESLPESLGRLKNLQTLNISWCTELVFLPKNLGNLKNLPRLDLS 954
Query: 381 GARITDSGAAYLRNFKNLRSLEICG----GGLTDA--GLTGLVSLNVSNSRITSAGLRHL 434
G +S L + +NL +L + L ++ GL L +L++ + L
Sbjct: 955 GCMKLESLPDSLGSLENLETLNLSKCFKLESLPESLGGLQNLQTLDLLVCHKLESLPESL 1014
Query: 435 KPLKNLRSLTLESC 448
LKNL++L L C
Sbjct: 1015 GGLKNLQTLQLSFC 1028
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 176/396 (44%), Gaps = 9/396 (2%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L ++DLS + +S L NLQ L+ + C ++ + E L L ++ +L
Sbjct: 660 LQTLDLSWCEKLESLPESLGSVQNLQRLNLSNCFEL-EALPESLGSLKDVQTLDLSSCYK 718
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
+ + ++ L N+ LDL RC ++ NL L L ++++ C + ++ +
Sbjct: 719 LESLP-ESLGSLKNVQTLDLSRCYKLVSLPKNLGRLKNLRTIDLSGCKKL-ETFPESFGS 776
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
L NL+ L +S +S L+ L LNL C + +SL L +L L+ + C
Sbjct: 777 LENLQILNLSNCFELESLPESFGSLKNLQTLNLVECKKLESLPESLGGLKNLQTLDFSVC 836
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
+ E + +L+ L L + L L L NL++L+L C + +L
Sbjct: 837 HKLESVPESLGGLNNLQTLKLSVCDNLVSLLKSLGSLKNLQTLDLSGCKKLESLPESLGS 896
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L NL+ L LS+ S L L NL+++N+S+ + L L +L L+L
Sbjct: 897 LENLQILNLSNCFKLESLPESLGRLKNLQTLNISWCTELVFLPKNLGNLKNLPRLDLSGC 956
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE--ICGG--GLTDA--G 412
++ +L SL L L+L +S L +NL++L+ +C L ++ G
Sbjct: 957 MKLESLPDSLGSLENLETLNLSKCFKLESLPESLGGLQNLQTLDLLVCHKLESLPESLGG 1016
Query: 413 LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
L L +L +S + L LKNL++LTL C
Sbjct: 1017 LKNLQTLQLSFCHKLESLPESLGGLKNLQTLTLSVC 1052
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 115/245 (46%), Gaps = 8/245 (3%)
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC 141
NLQ+L +FC ++ + E L GL NL +L+ + + + ++ L NL L L+ C
Sbjct: 1019 NLQTLQLSFCHKL-ESLPESLGGLKNLQTLTLSVCDKLESLP-ESLGSLKNLHTLKLQVC 1076
Query: 142 TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLK 201
++ +L + L +LN+ C+ + +S + + L NL+ L +S +S L
Sbjct: 1077 YKLKSLPESLGSIKNLHTLNLSVCHNL-ESIPESVGSLENLQILNLSNCFKLESIPKSLG 1135
Query: 202 GLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF 261
L+ L L L C + +L L +L L+L+ C+ + + + +L+ LNL
Sbjct: 1136 SLKNLQTLILSWCTRLVSLPKNLGNLKNLQTLDLSGCKKLESLPDSLGSLENLQTLNLS- 1194
Query: 262 NEITDECLVHLKG-LTNLESLNLDSCGIGD---EGLVNLTGLCNLKCLELSDTQVGSSGL 317
N E L + G L L++LNL CG + E L +L L L ++ + L
Sbjct: 1195 NCFKLESLPEILGSLKKLQTLNLFRCGKLESLPESLGSLKHLQTLVLIDCPKLEYLPKSL 1254
Query: 318 RHLSG 322
+LSG
Sbjct: 1255 ENLSG 1259
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 117/276 (42%), Gaps = 15/276 (5%)
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
L+ + S K+ S ++ K L+ +L+L GC + D SALG L L + Q
Sbjct: 545 LRVMHFSDCKLHGSAFSFQKCLR---VLDLSGCSIK----DFASALGQLKQLEVLIAQKL 597
Query: 242 DDG--CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
D E +++ L LNL + E + L +L L+L C L L
Sbjct: 598 QDRQFPESITRLSKLHYLNLSGSRGISEIPSSVGKLVSLVHLDLSYCTNVKVIPKALGIL 657
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 359
NL+ L+LS + S L + NL+ +NLS + L L +++L+L +
Sbjct: 658 RNLQTLDLSWCEKLESLPESLGSVQNLQRLNLSNCFELEALPESLGSLKDVQTLDLSSCY 717
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA------GL 413
++ +L SL + LDL S L KNLR++++ G + L
Sbjct: 718 KLESLPESLGSLKNVQTLDLSRCYKLVSLPKNLGRLKNLRTIDLSGCKKLETFPESFGSL 777
Query: 414 TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
L LN+SN + LKNL++L L CK
Sbjct: 778 ENLQILNLSNCFELESLPESFGSLKNLQTLNLVECK 813
>gi|422408524|ref|ZP_16485485.1| internalin A, partial [Listeria monocytogenes FSL F2-208]
gi|313610685|gb|EFR85741.1| internalin A [Listeria monocytogenes FSL F2-208]
Length = 439
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 165/333 (49%), Gaps = 31/333 (9%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
QI+D + L L+NLT L+ NN IT + A L NL +L++ T + L
Sbjct: 6 QITD--ISPLANLTNLTGLTLF-NNQIT--DIDALKNLTNLNRLEITGNTI--SDISVLS 58
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD-SGIAYLKGLQKLTLLNL 211
GL L+ L + N +TD +KPL+ LT L+ L IS +KV+D S +A L L++L N
Sbjct: 59 GLTSLQQL--SFGNQVTD--LKPLANLTTLERLDISSNKVSDISVLAKLTNLERLIATNN 114
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH 271
+ +T L L +L L+LN QL D G + + +L L++ N+I++ L
Sbjct: 115 QISDITP-----LGILTNLDELSLNGNQLKDIGT--LASLTNLTSLDVANNQISN--LAP 165
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
L GLT L L L I + + + GL L LEL + Q+ + +S L NL + L
Sbjct: 166 LSGLTKLTELELGYNQISN--ISPIEGLTALTSLELHENQL--EDISPISNLKNLTYLAL 221
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
F ISD + ++ L+ L+ L +++D +++L +LT + L +I+D
Sbjct: 222 YFNNISD--ISPVSSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAAHNQISD--LTP 275
Query: 392 LRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNS 424
L N + L + T+ + V++++ N+
Sbjct: 276 LANLTRISELGLNDQAWTNPPVNYKVNVSIPNT 308
>gi|356495085|ref|XP_003516411.1| PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max]
Length = 671
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 202/452 (44%), Gaps = 77/452 (17%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDS------GLIHLKD------- 79
L+ +CL G+ D +D++A + L ++DLS +T+ L HL+D
Sbjct: 183 LRVICLKWCVGIGDLGVDLVAIKCKELTTLDLSYLPITEKCLPSIFKLQHLEDLVLEGCF 242
Query: 80 ---------------CSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
C L+ LD + C IS H+ GLS LTS+S I+A G
Sbjct: 243 GIDDDSLDVDLLKQGCKTLKKLDISGCQNIS-----HV-GLSKLTSISGGLEKLISADGS 296
Query: 125 KAFAGLIN-LVKLDLERCTRIHGGLVNLKGL-------MKLESLNIKWCNCITDSDMKPL 176
L + L KL + + + G V +GL + L L++ C +TD + L
Sbjct: 297 PVTLSLADGLNKLSMLQSIVLDGCPVTSEGLRAIGNLCISLRELSLSKCLGVTDEALSFL 356
Query: 177 -SGLTNLKSLQISC-SKVTDSGIAYLK-GLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
S +L+ L I+C K+TD IA + LT L +E C + + F L
Sbjct: 357 VSKHKDLRKLDITCCRKITDVSIASISNSCAGLTSLKMESCTLVPS---------EAFVL 407
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEG 292
+C ++ L+L NEI DE L+ + + L SL + C I D G
Sbjct: 408 IGEKCHYIEE-------------LDLTDNEIDDEGLMSISSCSRLSSLKIGICLNITDRG 454
Query: 293 LVNLTGLCN-LKCLEL-SDTQVGSSGLRHLS-GLTNLESINLSF-TGISDGSLRKLAGLS 348
L + C+ LK L+L T V G+ ++ G LE IN S+ T I+D +L L+ S
Sbjct: 455 LTYVGMHCSKLKELDLYRSTGVDDLGISAIARGCPGLEMINTSYCTSITDRALITLSKCS 514
Query: 349 SLKSLNLDA-RQITDTGLAALT-SLTGLTHLDLFGAR-ITDSGAAYLRNF-KNLRSLEIC 404
+LK+L + +T GLAA+ + L+ LD+ I DSG L +F +NLR + +
Sbjct: 515 NLKTLEIRGCLLVTSIGLAAIAMNCRQLSRLDIKKCYNIDDSGMIALAHFSQNLRQINLS 574
Query: 405 GGGLTDAGLTGLVSLNVSNSRITSAGLRHLKP 436
+TD GL L +++ S T L+ L P
Sbjct: 575 YSSVTDVGLLSLANISCLQS-FTVLHLQGLVP 605
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 56/274 (20%)
Query: 18 RCLTEVSLEAFRD-CA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLI 75
R +T+VS+ + + CA L L + V + +I + + +DL+ +++ D GL+
Sbjct: 372 RKITDVSIASISNSCAGLTSLKMESCTLVPSEAFVLIGEKCHYIEELDLTDNEIDDEGLM 431
Query: 76 HLKDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLV 134
+ CS L SL C+ I+D GL ++ S L L R+ + G+ A A
Sbjct: 432 SISSCSRLSSLKIGICLNITDRGLTYVGMHCSKLKELDLYRSTGVDDLGISAIA------ 485
Query: 135 KLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVT 193
+G LE +N +C ITD + LS +NLK+L+I C VT
Sbjct: 486 -----------------RGCPGLEMINTSYCTSITDRALITLSKCSNLKTLEIRGCLLVT 528
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD----GCEKFS 249
G+A + C L L++ +C DD FS
Sbjct: 529 SIGLA----------------AIAMNC-------RQLSRLDIKKCYNIDDSGMIALAHFS 565
Query: 250 KIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
+ +L+ +NL ++ +TD L+ L ++ L+S +
Sbjct: 566 Q--NLRQINLSYSSVTDVGLLSLANISCLQSFTV 597
>gi|87307225|ref|ZP_01089370.1| hypothetical protein DSM3645_16920 [Blastopirellula marina DSM
3645]
gi|87289965|gb|EAQ81854.1| hypothetical protein DSM3645_16920 [Blastopirellula marina DSM
3645]
Length = 378
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 61/113 (53%)
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
+ +L + DE L L + N+ + L T+V +GL HL+GL LE +NL+ T ++D
Sbjct: 252 TYHLSDKPVHDEALAPLRKIGNVVEINLMGTEVTDAGLEHLAGLKQLERLNLAKTKVTDS 311
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
LR LA L LNL A +++D G+ L SL L HL L+ + T A L
Sbjct: 312 GLRYLAACEKLSYLNLYATEVSDAGIDHLYSLPSLRHLYLWQTKATPESAKQL 364
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%)
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA 366
LSD V L L + N+ INL T ++D L LAGL L+ LNL ++TD+GL
Sbjct: 255 LSDKPVHDEALAPLRKIGNVVEINLMGTEVTDAGLEHLAGLKQLERLNLAKTKVTDSGLR 314
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
L + L++L+L+ ++D+G +L + +LR L
Sbjct: 315 YLAACEKLSYLNLYATEVSDAGIDHLYSLPSLRHL 349
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
+NR S D + +L + DE L L+ + N+ +NL + D GL
Sbjct: 239 INRVAQSSDA--------KVVTYHLSDKPVHDEALAPLRKIGNVVEINLMGTEVTDAGLE 290
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
+L GL L+ L L+ T+V SGLR+L+ L +NL T +SD + L L SL+ L
Sbjct: 291 HLAGLKQLERLNLAKTKVTDSGLRYLAACEKLSYLNLYATEVSDAGIDHLYSLPSLRHLY 350
Query: 355 L 355
L
Sbjct: 351 L 351
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
+L+ + D+ KIG++ +NL E+TD L HL GL LE LNL + D G
Sbjct: 253 YHLSDKPVHDEALAPLRKIGNVVEINLMGTEVTDAGLEHLAGLKQLERLNLAKTKVTDSG 312
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL-AGLSSLK 351
L L L L L T+V +G+ HL L +L + L T + S ++L A + LK
Sbjct: 313 LRYLAACEKLSYLNLYATEVSDAGIDHLYSLPSLRHLYLWQTKATPESAKQLSAAIPGLK 372
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
+ D + PL + N+ + + ++VTD+G+ +L GL++L LNL VT + L L+A
Sbjct: 260 VHDEALAPLRKIGNVVEINLMGTEVTDAGLEHLAGLKQLERLNLAKTKVTDSGLRYLAAC 319
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
L YLNL ++SD G + + SL+ L L + T E L
Sbjct: 320 EKLSYLNLYATEVSDAGIDHLYSLPSLRHLYLWQTKATPESAKQL 364
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%)
Query: 205 KLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI 264
K+ +L PV L L +G++ +NL +++D G E + + L+ LNL ++
Sbjct: 249 KVVTYHLSDKPVHDEALAPLRKIGNVVEINLMGTEVTDAGLEHLAGLKQLERLNLAKTKV 308
Query: 265 TDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLT 324
TD L +L L LNL + + D G+ +L L +L+ L L T+ + LS
Sbjct: 309 TDSGLRYLAACEKLSYLNLYATEVSDAGIDHLYSLPSLRHLYLWQTKATPESAKQLSAAI 368
Query: 325 NLESINL 331
+NL
Sbjct: 369 PGLKVNL 375
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 19/139 (13%)
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDS 387
+ +LS + D +L L + ++ +NL ++TD GL L L L L+L ++TDS
Sbjct: 252 TYHLSDKPVHDEALAPLRKIGNVVEINLMGTEVTDAGLEHLAGLKQLERLNLAKTKVTDS 311
Query: 388 GAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 447
G YL A L LN+ + ++ AG+ HL L +LR L L
Sbjct: 312 GLRYL------------------AACEKLSYLNLYATEVSDAGIDHLYSLPSLRHLYLWQ 353
Query: 448 CKVTANDIKRLQSRDLPNL 466
K T K+L S +P L
Sbjct: 354 TKATPESAKQL-SAAIPGL 371
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%)
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
+ +S V D +A L+ + + +NL G VT A L+ L+ L L LNL + +++D
Sbjct: 252 TYHLSDKPVHDEALAPLRKIGNVVEINLMGTEVTDAGLEHLAGLKQLERLNLAKTKVTDS 311
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
G + L LNL E++D + HL L +L L L E L+
Sbjct: 312 GLRYLAACEKLSYLNLYATEVSDAGIDHLYSLPSLRHLYLWQTKATPESAKQLSA 366
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L ++L+ + VTDSGL +L C L L+ + ++SD G++HL L +L L + A
Sbjct: 298 LERLNLAKTKVTDSGLRYLAACEKLSYLNL-YATEVSDAGIDHLYSLPSLRHLYLWQTKA 356
Query: 119 ITAQGMKAFAGLINLVKLDL 138
T + K + I +K++L
Sbjct: 357 -TPESAKQLSAAIPGLKVNL 375
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Query: 51 VIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTS 110
V S + +++ LS V D L L+ N+ ++ +++D GLEHL GL L
Sbjct: 242 VAQSSDAKVVTYHLSDKPVHDEALAPLRKIGNVVEINL-MGTEVTDAGLEHLAGLKQLER 300
Query: 111 LSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITD 170
L+ + +T G++ A L L+L G+ +L L L L + W T
Sbjct: 301 LNLAKTK-VTDSGLRYLAACEKLSYLNLYATEVSDAGIDHLYSLPSLRHLYL-WQTKATP 358
Query: 171 SDMKPLSG 178
K LS
Sbjct: 359 ESAKQLSA 366
>gi|242083750|ref|XP_002442300.1| hypothetical protein SORBIDRAFT_08g017670 [Sorghum bicolor]
gi|241942993|gb|EES16138.1| hypothetical protein SORBIDRAFT_08g017670 [Sorghum bicolor]
Length = 489
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 198/437 (45%), Gaps = 102/437 (23%)
Query: 80 CSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL 138
C L+ L +C +ISD G++ L + L SL+ I+ +K+
Sbjct: 10 CPRLEKLSLKWCREISDIGIDLLAKKCPELRSLN------------------ISYLKVG- 50
Query: 139 ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSG 196
+G L ++ L +LE L + C+CI D ++ LS G +L+S+ +S C VT G
Sbjct: 51 ------NGSLRSISSLERLEELAMVCCSCIDDEGLELLSKGSDSLQSVDVSRCDHVTSEG 104
Query: 197 IA------------------------YLKGL----QKLTLLNLEGCPVTAACLDSL-SAL 227
+A +L L + LT+L L+G V+ + L ++ +
Sbjct: 105 LASLIDGRNFVQKLYAADCLHEIGQRFLSKLATLKETLTMLKLDGLEVSDSLLQAIGESC 164
Query: 228 GSLFYLNLNRCQ-LSDDGCEKF-SKIGSLKVLNL---------GFNEITDECLVHLKGLT 276
L + L++C ++DDG ++ L+ ++L + I D C +
Sbjct: 165 NKLVEIGLSKCSGVTDDGISSLVAQCSDLRTIDLTCCNLITNNALDSIADNCKM------ 218
Query: 277 NLESLNLDSCG-IGDEGLVNLTGLC-NLKCLELSDTQVGSSGLRHLSGLTNLESINLSF- 333
LE L L+SC I ++GL + C NLK ++L+D V + L HL+ + L + L
Sbjct: 219 -LECLRLESCSLINEKGLKRIATCCPNLKEIDLTDCGVDDAALEHLAKCSELRILKLGLC 277
Query: 334 TGISDGSLRKLAGLSS----LKSLNL-DARQITDTGLAALTSLTGLTHLDL----FGARI 384
+ ISD + +A +SS L L+L ITD GLAAL + G + L + +I
Sbjct: 278 SSISD---KGIAFISSNCGKLVELDLYRCNSITDDGLAALVN--GCKRIKLLNLCYCNKI 332
Query: 385 TDSGAAYLRNFKNLRSLE------ICGGGLTDA--GLTGLVSLNVSNSR-ITSAGLRHLK 435
TD+G +L + + L +LE I G G++ G L+ L++ + AGL L
Sbjct: 333 TDTGLGHLGSLEELTNLELRCLVRITGIGISSVAIGCKSLIELDLKRCYSVDDAGLWALA 392
Query: 436 PLK-NLRSLTLESCKVT 451
NLR LT+ C+VT
Sbjct: 393 RYALNLRQLTISYCQVT 409
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 28/203 (13%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
+N+K + IA+ +L +DL+ V D+ L HL CS L+ L C ISD G+ +
Sbjct: 230 INEKGLKRIATCCPNLKEIDLTDCGVDDAALEHLAKCSELRILKLGLCSSISDKGIAFIS 289
Query: 104 G-LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
L L R N+IT G+ A LVN G +++ LN+
Sbjct: 290 SNCGKLVELDLYRCNSITDDGLAA---------------------LVN--GCKRIKLLNL 326
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISC-SKVTDSGIAYLK-GLQKLTLLNLEGC-PVTAA 219
+CN ITD+ + L L L +L++ C ++T GI+ + G + L L+L+ C V A
Sbjct: 327 CYCNKITDTGLGHLGSLEELTNLELRCLVRITGIGISSVAIGCKSLIELDLKRCYSVDDA 386
Query: 220 CLDSLSALG-SLFYLNLNRCQLS 241
L +L+ +L L ++ CQ++
Sbjct: 387 GLWALARYALNLRQLTISYCQVT 409
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 156/365 (42%), Gaps = 92/365 (25%)
Query: 153 GLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
G +LE L++KWC I+D + L+ L+SL IS KV + + + L++L L +
Sbjct: 9 GCPRLEKLSLKWCREISDIGIDLLAKKCPELRSLNISYLKVGNGSLRSISSLERLEELAM 68
Query: 212 EGCPVTAACLD----SLSALG--SLFYLNLNRCQ-------------------------L 240
V +C+D L + G SL ++++RC L
Sbjct: 69 ----VCCSCIDDEGLELLSKGSDSLQSVDVSRCDHVTSEGLASLIDGRNFVQKLYAADCL 124
Query: 241 SDDGCEKFSKIGSLK----VLNLGFNEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLV 294
+ G SK+ +LK +L L E++D L + + L + L C G+ D+G+
Sbjct: 125 HEIGQRFLSKLATLKETLTMLKLDGLEVSDSLLQAIGESCNKLVEIGLSKCSGVTDDGIS 184
Query: 295 NLTGLCN---------------------------LKCLEL-SDTQVGSSGLRHLSG-LTN 325
+L C+ L+CL L S + + GL+ ++ N
Sbjct: 185 SLVAQCSDLRTIDLTCCNLITNNALDSIADNCKMLECLRLESCSLINEKGLKRIATCCPN 244
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTSLTG-LTHLDLFGAR 383
L+ I+L+ G+ D +L LA S L+ L L I+D G+A ++S G L LDL+
Sbjct: 245 LKEIDLTDCGVDDAALEHLAKCSELRILKLGLCSSISDKGIAFISSNCGKLVELDLYRCN 304
Query: 384 -ITDSGAAYLRN-FKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLR 441
ITD G A L N K ++ L +C ++IT GL HL L+ L
Sbjct: 305 SITDDGLAALVNGCKRIKLLNLC-----------------YCNKITDTGLGHLGSLEELT 347
Query: 442 SLTLE 446
+L L
Sbjct: 348 NLELR 352
>gi|158299381|ref|XP_319486.4| AGAP010289-PA [Anopheles gambiae str. PEST]
gi|157014337|gb|EAA14603.5| AGAP010289-PA [Anopheles gambiae str. PEST]
Length = 381
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 126/248 (50%), Gaps = 32/248 (12%)
Query: 62 VDLSGSDVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGL----EHLR--------GLSN 107
V + ++TD + H D NL+ L+ + C Q++D L +HL+ G SN
Sbjct: 139 VQVGCYNITDMAIGHAFAADFPNLKVLNLSLCKQVTDSSLGRITQHLKNIEVLELGGCSN 198
Query: 108 LTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN--LKGLMKLESLNIKWC 165
+T+ + TA G A L L L+ C R+ + +GL L S+N+ +C
Sbjct: 199 ITNTGLSKE---TADGTPA------LEYLGLQDCQRLSDEALRHIAQGLTSLRSINLSFC 249
Query: 166 NCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTA--ACL 221
+TDS +K L+ ++ L+ L + +C ++D G+AYL +G ++ L++ C A A +
Sbjct: 250 VSVTDSGLKHLARMSRLEELNLRACDNISDIGMAYLTEGCNSISTLDVSFCDKVADQAMV 309
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSK-IGSLKVLNLGF-NEITDECL-VHLKGLTNL 278
L L L+L+ CQ++D+G + +K + L+ LN+G + ITD L + L NL
Sbjct: 310 HISQGLFQLRSLSLSACQITDEGLSRIAKSLHDLETLNIGQCSRITDRGLEIVAAELINL 369
Query: 279 ESLNLDSC 286
+++L C
Sbjct: 370 RAIDLYGC 377
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 126/241 (52%), Gaps = 37/241 (15%)
Query: 179 LTNLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSALG--SLFYL 233
NLK L +S C +VTDS + + + L+ + +L L GC +T L +A G +L YL
Sbjct: 159 FPNLKVLNLSLCKQVTDSSLGRITQHLKNIEVLELGGCSNITNTGLSKETADGTPALEYL 218
Query: 234 NLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIG 289
L CQ LSD+ ++ + SL+ +NL F +TD L HL ++ LE LNL +C I
Sbjct: 219 GLQDCQRLSDEALRHIAQGLTSLRSINLSFCVSVTDSGLKHLARMSRLEELNLRACDNIS 278
Query: 290 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLA-GL 347
D G+ LT CN ++ ++++SF ++D ++ ++ GL
Sbjct: 279 DIGMAYLTEGCN-----------------------SISTLDVSFCDKVADQAMVHISQGL 315
Query: 348 SSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITDSGAAYL-RNFKNLRSLEIC 404
L+SL+L A QITD GL+ + SL L L++ +RITD G + NLR++++
Sbjct: 316 FQLRSLSLSACQITDEGLSRIAKSLHDLETLNIGQCSRITDRGLEIVAAELINLRAIDLY 375
Query: 405 G 405
G
Sbjct: 376 G 376
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 113/256 (44%), Gaps = 63/256 (24%)
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIG----------SLKVLNLGF-NEITDECLVH 271
S + GSL + R Q+ GC + + +LKVLNL ++TD L
Sbjct: 124 SPTLFGSLVKRGIKRVQV---GCYNITDMAIGHAFAADFPNLKVLNLSLCKQVTDSSLGR 180
Query: 272 L-KGLTNLESLNLDSCG-IGDEGLVNLT--GLCNLKCLELSDTQ-VGSSGLRHLS-GLTN 325
+ + L N+E L L C I + GL T G L+ L L D Q + LRH++ GLT+
Sbjct: 181 ITQHLKNIEVLELGGCSNITNTGLSKETADGTPALEYLGLQDCQRLSDEALRHIAQGLTS 240
Query: 326 LESINLSF-TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI 384
L SINLSF ++D L+ LA +S L+ LNL A I
Sbjct: 241 LRSINLSFCVSVTDSGLKHLARMSRLEELNLRACD-----------------------NI 277
Query: 385 TDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSN-SRITSAGLRHL-KPLKNLRS 442
+D G AYL G + +L+VS ++ + H+ + L LRS
Sbjct: 278 SDIGMAYLTE-----------------GCNSISTLDVSFCDKVADQAMVHISQGLFQLRS 320
Query: 443 LTLESCKVTANDIKRL 458
L+L +C++T + R+
Sbjct: 321 LSLSACQITDEGLSRI 336
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 66/116 (56%), Gaps = 5/116 (4%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD-VTDSGLIHL-KDCSNLQSLDFNF 90
L++L L ++D M + +S+ ++D+S D V D ++H+ + L+SL +
Sbjct: 266 LEELNLRACDNISDIGMAYLTEGCNSISTLDVSFCDKVADQAMVHISQGLFQLRSLSLSA 325
Query: 91 CIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAG-LINLVKLDLERCTRI 144
C QI+D GL + + L +L +L+ + + IT +G++ A LINL +DL CTR+
Sbjct: 326 C-QITDEGLSRIAKSLHDLETLNIGQCSRITDRGLEIVAAELINLRAIDLYGCTRL 380
>gi|301617436|ref|XP_002938142.1| PREDICTED: f-box/LRR-repeat protein 14-like [Xenopus (Silurana)
tropicalis]
Length = 400
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 150/303 (49%), Gaps = 50/303 (16%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKP--LSGLTNLKSLQIS-CSKVTDSGIA----YLKGL 203
++GL +ESLN+ C +TD+ + + + +L+SL +S C +VTDS + YLKGL
Sbjct: 86 IQGLPDIESLNLSGCYNLTDNGLGHAFVQEIGSLRSLNLSLCKQVTDSSLGRIAQYLKGL 145
Query: 204 QKLTL-----------------------LNLEGC-PVTAACLDSLSALG--------SLF 231
Q L L LNL C V+ + L+ + L
Sbjct: 146 QVLELGGCTNITNTGLLLIAWGLHGLKSLNLRSCRHVSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 232 YLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-G 287
L L CQ L+D + S+ + L+VLNL F I+D L+HL + L SLNL SC
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLQGLRVLNLSFCGGISDAGLLHLSHMGGLRSLNLRSCDN 265
Query: 288 IGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRHLS-GLTNLESINLSFTGISDGSL-RK 343
I D G+++L G L L++S +VG L +++ GL L+S++L ISD + R
Sbjct: 266 ISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLYGLKSLSLCSCHISDDGINRM 325
Query: 344 LAGLSSLKSLNL-DARQITDTGLAALTS-LTGLTHLDLFG-ARITDSGAAYLRNFKNLRS 400
+ + L++LN+ +ITD GL + L+ LT +DL+G RIT G + L+
Sbjct: 326 VRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKKGLERITQLPCLKV 385
Query: 401 LEI 403
L +
Sbjct: 386 LNL 388
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 41/290 (14%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEH 101
V D + IA L ++L G +++T++GL+ + L+SL+ C +SD G+ H
Sbjct: 130 VTDSSLGRIAQYLKGLQVLELGGCTNITNTGLLLIAWGLHGLKSLNLRSCRHVSDVGIGH 189
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL------KGLM 155
L G++ A G + L +L L+ C + L +L +GL
Sbjct: 190 LAGMTR-----------------SAAEGCLGLEQLTLQDCQK----LTDLSLKHISRGLQ 228
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLK-GLQKLTLLNLEG 213
L LN+ +C I+D+ + LS + L+SL + SC ++D+GI +L G +L+ L++
Sbjct: 229 GLRVLNLSFCGGISDAGLLHLSHMGGLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSF 288
Query: 214 CPVTAACLDSLSALGSLFY----LNLNRCQLSDDGCEKFSK-IGSLKVLNLG-FNEITDE 267
C SL+ + Y L+L C +SDDG + + + L+ LN+G ITD+
Sbjct: 289 CDKVGD--QSLAYIAQGLYGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDK 346
Query: 268 CLVHL-KGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQVGSS 315
L + + L+ L ++L C I +GL +T L LK L L Q+ S
Sbjct: 347 GLELIAEHLSQLTGIDLYGCTRITKKGLERITQLPCLKVLNLGLWQMTES 396
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 49/202 (24%)
Query: 272 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 322
++GL ++ESLNL C G+G + + L +L C +++D+ +G ++L G
Sbjct: 86 IQGLPDIESLNLSGCYNLTDNGLGHAFVQEIGSLRSLNLSLCKQVTDSSLGRIA-QYLKG 144
Query: 323 LTNLE---SINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLT------ 372
L LE N++ TG+ L GL LKSLNL + R ++D G+ L +T
Sbjct: 145 LQVLELGGCTNITNTGL----LLIAWGLHGLKSLNLRSCRHVSDVGIGHLAGMTRSAAEG 200
Query: 373 --GLTHLDLFG-ARITDSGAAYL-RNFKNLR--SLEICGGGLTDAGLTGLVSLNVSNSRI 426
GL L L ++TD ++ R + LR +L CGG I
Sbjct: 201 CLGLEQLTLQDCQKLTDLSLKHISRGLQGLRVLNLSFCGG-------------------I 241
Query: 427 TSAGLRHLKPLKNLRSLTLESC 448
+ AGL HL + LRSL L SC
Sbjct: 242 SDAGLLHLSHMGGLRSLNLRSC 263
>gi|300704108|ref|YP_003745710.1| leucine-rich-repeat type III effector protein (gala4) [Ralstonia
solanacearum CFBP2957]
gi|299071771|emb|CBJ43095.1| leucine-rich-repeat type III effector protein (GALA4) [Ralstonia
solanacearum CFBP2957]
Length = 461
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 137/318 (43%), Gaps = 57/318 (17%)
Query: 168 ITDSDMKPLSGLTNLKSLQISC--SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
TD+D++ L +L+ L +S +T GIA+L L L L++ GC + A L+
Sbjct: 133 FTDADLQRLP--PSLRELDLSLCEGPITAVGIAHLLAL-PLDRLDVSGCELNADSARLLA 189
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
+L LNL R + D G F++ L LN+ N I + L T + +L++ +
Sbjct: 190 GHPTLTTLNLRRNAIDDAGVAAFARNKKLTTLNVSSNGIGPAGVRALAANTTITTLDISN 249
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS-------- 337
IGDEG + L L L+ SD +G G + L+ T L S++LS+ I
Sbjct: 250 NEIGDEGALALASNTTLTRLDASDCGIGPEGTQALATSTTLTSLDLSYNAIEAEGVEALG 309
Query: 338 -DGSLRK---------------LAGLSSLKSLNLDARQITDTGLAALTSLT--------- 372
+ +LR LA ++L LNL + I + G A + T
Sbjct: 310 RNTTLRTLHACGNELGHREAELLAANTTLTVLNLSSNAIGNAGARAFGANTTLVELNLSN 369
Query: 373 -------------GLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGL 413
LT LDL +I D+ A L + L +L + + D AG
Sbjct: 370 NGIERVPEWADNGKLTTLDLSNNQIGDTAAQVLAASRTLTTLNVGSNRIGDTGACALAGN 429
Query: 414 TGLVSLNVSNSRITSAGL 431
T L +LNVS +RI AG+
Sbjct: 430 TTLTTLNVSLNRIGKAGM 447
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 150/337 (44%), Gaps = 14/337 (4%)
Query: 70 TDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA----ITAQGMK 125
TD+ L L +L+ LD + C +G + + G+++L +L R + + A +
Sbjct: 134 TDADLQRLP--PSLRELDLSLC----EGPITAV-GIAHLLALPLDRLDVSGCELNADSAR 186
Query: 126 AFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
AG L L+L R G+ KL +LN+ N I + ++ L+ T + +L
Sbjct: 187 LLAGHPTLTTLNLRRNAIDDAGVAAFARNKKLTTLNVS-SNGIGPAGVRALAANTTITTL 245
Query: 186 QISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGC 245
IS +++ D G L LT L+ C + +L+ +L L+L+ + +G
Sbjct: 246 DISNNEIGDEGALALASNTTLTRLDASDCGIGPEGTQALATSTTLTSLDLSYNAIEAEGV 305
Query: 246 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
E + +L+ L+ NE+ L T L LNL S IG+ G N +
Sbjct: 306 EALGRNTTLRTLHACGNELGHREAELLAANTTLTVLNLSSNAIGNAGARAFG--ANTTLV 363
Query: 306 ELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL 365
EL+ + G + + L +++LS I D + + LA +L +LN+ + +I DTG
Sbjct: 364 ELNLSNNGIERVPEWADNGKLTTLDLSNNQIGDTAAQVLAASRTLTTLNVGSNRIGDTGA 423
Query: 366 AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
AL T LT L++ RI +G L L LE
Sbjct: 424 CALAGNTTLTTLNVSLNRIGKAGMLALAANTTLEKLE 460
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 103/252 (40%), Gaps = 33/252 (13%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+++ ++D+S +++ D G + L + L LD + C I G + L + LTSL
Sbjct: 240 TTITTLDISNNEIGDEGALALASNTTLTRLDASDC-GIGPEGTQALATSTTLTSLDLSY- 297
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
NAI A+G++A N L C N + + + L
Sbjct: 298 NAIEAEGVEALG--RNTTLRTLHAC-----------------------GNELGHREAELL 332
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE--GCPVTAACLDSLSALGSLFYLN 234
+ T L L +S + + ++G L LNL G D+ G L L+
Sbjct: 333 AANTTLTVLNLSSNAIGNAGARAFGANTTLVELNLSNNGIERVPEWADN----GKLTTLD 388
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
L+ Q+ D + + +L LN+G N I D L G T L +LN+ IG G++
Sbjct: 389 LSNNQIGDTAAQVLAASRTLTTLNVGSNRIGDTGACALAGNTTLTTLNVSLNRIGKAGML 448
Query: 295 NLTGLCNLKCLE 306
L L+ LE
Sbjct: 449 ALAANTTLEKLE 460
>gi|15896525|ref|NP_349874.1| ChW repeat-containing protein [Clostridium acetobutylicum ATCC 824]
gi|337738484|ref|YP_004637931.1| ChW repeat-containing protein [Clostridium acetobutylicum DSM 1731]
gi|384459994|ref|YP_005672414.1| putative surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum EA 2018]
gi|15026357|gb|AAK81214.1|AE007824_3 Possible surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum ATCC 824]
gi|325510683|gb|ADZ22319.1| putative surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum EA 2018]
gi|336293297|gb|AEI34431.1| ChW repeat-containing protein [Clostridium acetobutylicum DSM 1731]
Length = 849
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 165/345 (47%), Gaps = 43/345 (12%)
Query: 145 HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY----- 199
+ + +L G+ L+SL+ + N + S++ PL L NL++L + +K+TD+
Sbjct: 519 NANITDLTGIENLKSLDTLYLNSNSISNLTPLRSLINLQNLYLGNNKITDTTALSSLSSL 578
Query: 200 ---------------LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
+K L LT L+L +++ LS + L LNL+ +++D
Sbjct: 579 QRLDLYGNALNTFDGIKNLSNLTELDLSNTNLSSLAF--LSVVTKLQNLNLSSNKIAD-- 634
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
S + +L L+L N+I++ + L L L LNL+S I D + +LT L L+
Sbjct: 635 ISALSNLTNLNQLDLSTNQISN--ISSLNNLIGLNILNLNSNKIND--ISSLTNLKQLQT 690
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 364
L L+ + + L T L + LS I+D + LA L+SLK+++L QIT+
Sbjct: 691 LSLNSNTI--QDIDVLKNFTVLNVLGLSNNKITD--ISTLANLNSLKNISLSNNQITN-- 744
Query: 365 LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLV----SLN 420
++ L +LT +L L +I D A L KNL L + +TD G + +L
Sbjct: 745 ISCLCNLTNAQYLHLENNQINDISA--LNKLKNLAYLYLNNNQITDITALGFLDKLNTLY 802
Query: 421 VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 465
+S ++IT + LK L NL+ L L +T+ D L+ LPN
Sbjct: 803 LSYNKITK--VDSLKNLTNLKILILAENNITSTDQTSLK-ESLPN 844
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 161/355 (45%), Gaps = 50/355 (14%)
Query: 63 DLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT-- 120
++S + ++ + L NL+SLD + S L LR L NL +L + NN IT
Sbjct: 511 NISSLNANNANITDLTGIENLKSLDTLYLNSNSISNLTPLRSLINLQNL-YLGNNKITDT 569
Query: 121 ---------------AQGMKAFAG---LINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
+ F G L NL +LDL L L + KL++LN+
Sbjct: 570 TALSSLSSLQRLDLYGNALNTFDGIKNLSNLTELDLSNTNL--SSLAFLSVVTKLQNLNL 627
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
N I +D+ LS LTNL L +S +++ S I+ L L L +LNL + +
Sbjct: 628 S-SNKI--ADISALSNLTNLNQLDLSTNQI--SNISSLNNLIGLNILNLNSNKIND--IS 680
Query: 223 SLSALGSLFYLNLNRCQLSD-DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
SL+ L L L+LN + D D + F+ L VL L N+ITD + L NL S
Sbjct: 681 SLTNLKQLQTLSLNSNTIQDIDVLKNFT---VLNVLGLSNNKITD-----ISTLANLNS- 731
Query: 282 NLDSCGIGDEGLVNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
L + + + + N++ LCNL + L L + Q+ + L+ L NL + L+ I+D
Sbjct: 732 -LKNISLSNNQITNISCLCNLTNAQYLHLENNQIND--ISALNKLKNLAYLYLNNNQITD 788
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
+ L L L +L L +IT + +L +LT L L L IT + L+
Sbjct: 789 --ITALGFLDKLNTLYLSYNKITK--VDSLKNLTNLKILILAENNITSTDQTSLK 839
>gi|87308228|ref|ZP_01090370.1| hypothetical protein DSM3645_21562 [Blastopirellula marina DSM
3645]
gi|87289310|gb|EAQ81202.1| hypothetical protein DSM3645_21562 [Blastopirellula marina DSM
3645]
Length = 438
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 140/321 (43%), Gaps = 12/321 (3%)
Query: 96 DGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI---HGGLVNLK 152
D G+ + LS L +L + A + +F GL L KL+ T + + L+
Sbjct: 104 DKGIRVVTTLSPLKALLIAKTKASS----DSFFGLEELRKLEQVEFTDLVINQAVIGGLR 159
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
GL L NI+ + S LK+L I K + I + + L L L
Sbjct: 160 GLPNLNQFNIRNSELALPWALDERS-FPQLKTLLIDGGKADAALIGEVCSIPTLQQLQL- 217
Query: 213 GCPVTAACLDS---LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
CPV ++ L+ L +L L+L R L D+ C ++ ++ LN+G I ++ L
Sbjct: 218 SCPVGQFTINDFRRLADLPNLVDLSLVRSSLPDESCPLATQQLKIQKLNVGQTGIGNQFL 277
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
+ NL L+L I D GL L+ L L+ L LS+T + S+ +H S L +L +
Sbjct: 278 STIGDFPNLRELDLTGSKITDGGLAYLSELSQLESLTLSETNISSAAAKHFSQLQSLREL 337
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGA 389
+L T + ++ +A L +L+ ++L + L L L L + L I +
Sbjct: 338 HLHNTKLDGQAMVDIAKLKNLEWIDLSKSNVQGEQLLELRKLPKLRGVVLMNTPIGAADL 397
Query: 390 AYLRNFKNLRSLEICGGGLTD 410
YL+ ++ + + LT+
Sbjct: 398 PYLKQLYHIDEIYVEETNLTN 418
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 174/402 (43%), Gaps = 32/402 (7%)
Query: 74 LIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINL 133
L+ L D L F ++ D L L LT L + + +G++ L L
Sbjct: 63 LLQLPDVKLLSLHQTKFAEEVGDV----LGQLHQLTELQL--HESFDDKGIRVVTTLSPL 116
Query: 134 VKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
L + + L+ L KLE + I + + L GL NL I S++
Sbjct: 117 KALLIAKTKASSDSFFGLEELRKLEQVEFTDL-VINQAVIGGLRGLPNLNQFNIRNSELA 175
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC---QLSDDGCEKFSK 250
+ +L L ++G AA + + ++ +L L L+ C Q + + + +
Sbjct: 176 LPWALDERSFPQLKTLLIDGGKADAALIGEVCSIPTLQQLQLS-CPVGQFTINDFRRLAD 234
Query: 251 IGSLKVLNLGFNEITDE-CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSD 309
+ +L L+L + + DE C + + L ++ LN+ GIG++ L + NL+ L+L+
Sbjct: 235 LPNLVDLSLVRSSLPDESCPLATQQL-KIQKLNVGQTGIGNQFLSTIGDFPNLRELDLTG 293
Query: 310 TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALT 369
+++ GL +LS L+ LES+ LS T IS + + + L SL+ L+L ++ + +
Sbjct: 294 SKITDGGLAYLSELSQLESLTLSETNISSAAAKHFSQLQSLRELHLHNTKLDGQAMVDIA 353
Query: 370 SLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSA 429
L L +DL + + LR LR G+V + N+ I +A
Sbjct: 354 KLKNLEWIDLSKSNVQGEQLLELRKLPKLR---------------GVV---LMNTPIGAA 395
Query: 430 GLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFRP 471
L +LK L ++ + +E +T + +L L ++RP
Sbjct: 396 DLPYLKQLYHIDEIYVEETNLTNEEQIKLHEA-LAKARNYRP 436
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 5/169 (2%)
Query: 27 AFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSL 86
A + +Q L +GQ G+ ++++ I +L +DL+GS +TD GL +L + S L+SL
Sbjct: 256 ATQQLKIQKLNVGQT-GIGNQFLSTIGD-FPNLRELDLTGSKITDGGLAYLSELSQLESL 313
Query: 87 DFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG 146
+ IS +H L +L L N + Q M A L NL +DL +
Sbjct: 314 TLSET-NISSAAAKHFSQLQSLRELHL-HNTKLDGQAMVDIAKLKNLEWIDLSKSNVQGE 371
Query: 147 GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDS 195
L+ L+ L KL + + I +D+ L L ++ + + + +T+
Sbjct: 372 QLLELRKLPKLRGV-VLMNTPIGAADLPYLKQLYHIDEIYVEETNLTNE 419
>gi|71668063|ref|XP_820975.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70886340|gb|EAN99124.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 930
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 192/455 (42%), Gaps = 80/455 (17%)
Query: 4 RDISQQIFNELVYSRCLTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSV 62
R ++Q +L YS +T+ SL A R C L L L Q+ G M ++ + SL +
Sbjct: 412 RALNQLRVLDLGYS-SVTDDSLTALRFCPELAKLDL-QWCGRITSLMCLVGALCDSLREL 469
Query: 63 DLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQ 122
+L+ + VTD GL+ LKD + L+ + C +SD + L NLT L
Sbjct: 470 NLTETSVTDEGLVPLKDFAALEWISLEGCGAVSDVNV-----LCNLTRLR---------- 514
Query: 123 GMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNL 182
++D+ R + G+V+L L + ++ C +TD++ L L L
Sbjct: 515 ------------EVDVGRTRVTNRGVVSLSQCQALRVMRMRQCYRLTDANF--LGALQQL 560
Query: 183 KSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
+ + +S VT+ GIA L G + L L L+ C ++ L L L L+L+ + +
Sbjct: 561 EEVDLSDCPVTNEGIAALFGARSLRKLRLQSCHAVND-VNFLGGLEHLMLLDLHHTTVDE 619
Query: 243 DGCEKFSK-------------------------IGSLKVLNLGFNEITDECLVHLKGLTN 277
+G ++ + LK L+L ++T + L L+
Sbjct: 620 EGSVGLAQCPQLMTLIMHSVLVHSLQQWNAALFLPRLKRLDLSTTKVTSDALSFLRMCPV 679
Query: 278 LESLNLDSCGIGDEGLVNL----------TGLCNL--KCLELSDTQ---VGSSGLRHLSG 322
LE+L+L C + + +L TG+C + + +E DT + G
Sbjct: 680 LETLSLRGC----KNITHLDFLILQPSSGTGVCAIVPRDVEPHDTVGDIIAGKEKNPDDG 735
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
+ +E++ + I ++ + L+ L L +TD GL AL GL L L
Sbjct: 736 PSPIETMTTNDGVIKSTAVAAVVSRHRLRELTLSGTGVTDEGLRALQYCPGLERLRLAHC 795
Query: 383 R-ITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL 416
+ TD A LR L+ L++ G+T +GL L
Sbjct: 796 KNFTD--VAVLRWLSQLKELDLSATGVTGSGLAKL 828
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 184/440 (41%), Gaps = 59/440 (13%)
Query: 58 SLLSVDLSGSDVTDSGLIH-LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+L +DLS + VT+ G+ + + L L C +I L+ LR L+ L L
Sbjct: 368 ALRDLDLSYTQVTEEGMYRDVSKLNKLSRLSLEGCRKIE--SLQWLRALNQLRVLDLG-Y 424
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHG-------------------------GLVNL 151
+++T + A L KLDL+ C RI GLV L
Sbjct: 425 SSVTDDSLTALRFCPELAKLDLQWCGRITSLMCLVGALCDSLRELNLTETSVTDEGLVPL 484
Query: 152 KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
K LE ++++ C ++D ++ L LT L+ + + ++VT+ G+ L Q L ++ +
Sbjct: 485 KDFAALEWISLEGCGAVSDVNV--LCNLTRLREVDVGRTRVTNRGVVSLSQCQALRVMRM 542
Query: 212 EGC-PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
C +T A + L AL L ++L+ C ++++G SL+ L L ++ +
Sbjct: 543 RQCYRLTDA--NFLGALQQLEEVDLSDCPVTNEGIAALFGARSLRKLRLQSCHAVND-VN 599
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG---LTNLE 327
L GL +L L+L + +EG V L L L + V S L+ + L L+
Sbjct: 600 FLGGLEHLMLLDLHHTTVDEEGSVGLAQCPQLMTLIMHSVLVHS--LQQWNAALFLPRLK 657
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITD-----------TGLAALTSLTGLT 375
++LS T ++ +L L L++L+L + IT TG+ A+
Sbjct: 658 RLDLSTTKVTSDALSFLRMCPVLETLSLRGCKNITHLDFLILQPSSGTGVCAIVPRDVEP 717
Query: 376 HLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS------LNVSNSRITSA 429
H D G I + ++ G + + +VS L +S + +T
Sbjct: 718 H-DTVGDIIAGKEKNPDDGPSPIETMTTNDGVIKSTAVAAVVSRHRLRELTLSGTGVTDE 776
Query: 430 GLRHLKPLKNLRSLTLESCK 449
GLR L+ L L L CK
Sbjct: 777 GLRALQYCPGLERLRLAHCK 796
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 140/337 (41%), Gaps = 79/337 (23%)
Query: 179 LTNLKSLQISCSKVTDSGIAY-LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
L L+ L +S ++VT+ G+ + L KL+ L+LEGC + L L AL L L+L
Sbjct: 366 LCALRDLDLSYTQVTEEGMYRDVSKLNKLSRLSLEGCRKIES-LQWLRALNQLRVLDLGY 424
Query: 238 CQLSDDG------CEKFSKIG-------------------SLKVLNLGFNEITDECLVHL 272
++DD C + +K+ SL+ LNL +TDE LV L
Sbjct: 425 SSVTDDSLTALRFCPELAKLDLQWCGRITSLMCLVGALCDSLRELNLTETSVTDEGLVPL 484
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSD---TQVGSSGLRHLS-------- 321
K LE ++L+ CG + ++ LCNL L D T+V + G+ LS
Sbjct: 485 KDFAALEWISLEGCG----AVSDVNVLCNLTRLREVDVGRTRVTNRGVVSLSQCQALRVM 540
Query: 322 ---------------GLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGL 365
L LE ++LS +++ + L G SL+ L L + + D
Sbjct: 541 RMRQCYRLTDANFLGALQQLEEVDLSDCPVTNEGIAALFGARSLRKLRLQSCHAVNDVNF 600
Query: 366 AALTSLTGLTH---LDLFGARITDSGAAYLRNFKNL----------RSLEICGGGLTDAG 412
L GL H LDL + + G+ L L SL+ L
Sbjct: 601 -----LGGLEHLMLLDLHHTTVDEEGSVGLAQCPQLMTLIMHSVLVHSLQQWNAALF--- 652
Query: 413 LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
L L L++S +++TS L L+ L +L+L CK
Sbjct: 653 LPRLKRLDLSTTKVTSDALSFLRMCPVLETLSLRGCK 689
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 139/343 (40%), Gaps = 57/343 (16%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+ L VD+ + VT+ G++ L C L+ + C +++D L L L + +
Sbjct: 511 TRLREVDVGRTRVTNRGVVSLSQCQALRVMRMRQCYRLTDANF--LGALQQLEEVDLS-D 567
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIH-----GGLVNLK---------------GLMK 156
+T +G+ A G +L KL L+ C ++ GGL +L GL +
Sbjct: 568 CPVTNEGIAALFGARSLRKLRLQSCHAVNDVNFLGGLEHLMLLDLHHTTVDEEGSVGLAQ 627
Query: 157 LESLNIKWCNCITDSDMKPLSG---LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
L + + ++ + L LK L +S +KVT +++L+ L L+L G
Sbjct: 628 CPQLMTLIMHSVLVHSLQQWNAALFLPRLKRLDLSTTKVTSDALSFLRMCPVLETLSLRG 687
Query: 214 CPVTAACLDSL-------SALGSLFYLNLNRCQLSDD---GCEKFSKIGSLKVLNLGFNE 263
C LD L + + ++ ++ D G EK G + + N+
Sbjct: 688 C-KNITHLDFLILQPSSGTGVCAIVPRDVEPHDTVGDIIAGKEKNPDDGPSPIETMTTND 746
Query: 264 --ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL---TGLCNLK---CLELSDTQVGSS 315
I + + L L L G+ DEGL L GL L+ C +D V
Sbjct: 747 GVIKSTAVAAVVSRHRLRELTLSGTGVTDEGLRALQYCPGLERLRLAHCKNFTDVAV--- 803
Query: 316 GLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L L+ L+ ++LS TG++ L KL+ S NL AR
Sbjct: 804 ----LRWLSQLKELDLSATGVTGSGLAKLS-----PSGNLPAR 837
>gi|443723521|gb|ELU11898.1| hypothetical protein CAPTEDRAFT_102929 [Capitella teleta]
Length = 439
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 147/289 (50%), Gaps = 31/289 (10%)
Query: 130 LINLVKLDLERCTRIHGGLVN-LKGLMK-LESLNIKWCNCITDSDMKPLS-GLTNLKSLQ 186
L +LV L+L C I + + G K L+ L + C IT + + L+ GL+NL+ L
Sbjct: 161 LPSLVSLNLSLCKVITDSTIACIAGHQKQLQELELGGCAQITTNALLLLACGLSNLRRLN 220
Query: 187 I-SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGC 245
+ SC K+TD G+AYL G Q T+ P A L+ ++ L CQ D
Sbjct: 221 LRSCCKITDEGVAYLTG-QSHTV------PTGTAMLE---------HIVLQDCQKITDVS 264
Query: 246 EKFSKIG--SLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLC 300
K+ +G LK +NL F +TD L L + +L+ L+L +C GI D G+ L GL
Sbjct: 265 LKYLSLGFSQLKSVNLSFCTGVTDSGLECLSRMPSLQELDLRACDGISDHGVGYLAEGLT 324
Query: 301 NLKCLELSDT-QVGSSGLRHLS-GLTNLESINLSFTGISDGSLRKLAGLSS-LKSLNL-D 356
L L LS ++ + L H+S GL +L +++L ISD ++ L G S + LN+
Sbjct: 325 RLSVLHLSFCDRITDTALLHISHGLIHLTALSLCDCSISDEGIQHLIGSSQDIVKLNIGQ 384
Query: 357 ARQITDTGLAALT-SLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEI 403
++TD L + + T L +D++G RIT G +LR+ ++ ++ +
Sbjct: 385 CDRLTDASLELIAQNFTQLHTIDIYGCTRITKLGVKHLRDQPHISAINM 433
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 151/309 (48%), Gaps = 67/309 (21%)
Query: 200 LKGLQKLTLLNLEGCP-VTAACL-DSLSA-LGSLFYLNLNRCQLSDD-------GCEKFS 249
++G+ L LNL GC VT + +LS L SL LNL+ C++ D G +K
Sbjct: 131 VEGVPGLRSLNLSGCYNVTDVIMTHALSHDLPSLVSLNLSLCKVITDSTIACIAGHQK-- 188
Query: 250 KIGSLKVLNLG-FNEITDECLVHLK-GLTNLESLNLDSC-GIGDEGLVNLTGLCN----- 301
L+ L LG +IT L+ L GL+NL LNL SC I DEG+ LTG +
Sbjct: 189 ---QLQELELGGCAQITTNALLLLACGLSNLRRLNLRSCCKITDEGVAYLTGQSHTVPTG 245
Query: 302 ---LKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL 355
L+ + L D Q + L++LS G + L+S+NLSF TG++D L L+ + SL+ L+L
Sbjct: 246 TAMLEHIVLQDCQKITDVSLKYLSLGFSQLKSVNLSFCTGVTDSGLECLSRMPSLQELDL 305
Query: 356 DA-RQITDTGLAALTS-LTGLTHLDL-FGARITDSGAAYLRN-FKNLRSLEICGGGLTDA 411
A I+D G+ L LT L+ L L F RITD+ ++ + +L +L +C ++D
Sbjct: 306 RACDGISDHGVGYLAEGLTRLSVLHLSFCDRITDTALLHISHGLIHLTALSLCDCSISDE 365
Query: 412 GLTGL-------VSLNVSN---------------------------SRITSAGLRHLKPL 437
G+ L V LN+ +RIT G++HL+
Sbjct: 366 GIQHLIGSSQDIVKLNIGQCDRLTDASLELIAQNFTQLHTIDIYGCTRITKLGVKHLRDQ 425
Query: 438 KNLRSLTLE 446
++ ++ +E
Sbjct: 426 PHISAINME 434
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 148/306 (48%), Gaps = 53/306 (17%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDC--SNLQSLDFNFCIQISDGGLE 100
+ D + IA L ++L G + +T + L+ L C SNL+ L+ C +I+D G+
Sbjct: 175 ITDSTIACIAGHQKQLQELELGGCAQITTNALL-LLACGLSNLRRLNLRSCCKITDEGVA 233
Query: 101 HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL 160
+L G S+ T M L ++V D ++ T + ++L G +L+S+
Sbjct: 234 YLTGQSHTVP---------TGTAM-----LEHIVLQDCQKITDVSLKYLSL-GFSQLKSV 278
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VT 217
N+ +C +TDS ++ LS + +L+ L + +C ++D G+ YL +GL +L++L+L C +T
Sbjct: 279 NLSFCTGVTDSGLECLSRMPSLQELDLRACDGISDHGVGYLAEGLTRLSVLHLSFCDRIT 338
Query: 218 AACLDSLS-ALGSLFYLNLNRCQLSDDGCEKFSKIGS---LKVLNLG-FNEITDECLVHL 272
L +S L L L+L C +SD+G + IGS + LN+G + +TD L +
Sbjct: 339 DTALLHISHGLIHLTALSLCDCSISDEGIQHL--IGSSQDIVKLNIGQCDRLTDASLELI 396
Query: 273 -KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
+ T L ++++ C T++ G++HL ++ +IN+
Sbjct: 397 AQNFTQLHTIDIYGC-----------------------TRITKLGVKHLRDQPHISAINM 433
Query: 332 SFTGIS 337
S
Sbjct: 434 ELFAAS 439
>gi|156403875|ref|XP_001640133.1| predicted protein [Nematostella vectensis]
gi|156227266|gb|EDO48070.1| predicted protein [Nematostella vectensis]
Length = 779
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 220/481 (45%), Gaps = 67/481 (13%)
Query: 20 LTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHL- 77
LT SL+ C LQDL L + GV D+ M IA +SLL ++LS ++DS L +L
Sbjct: 310 LTRESLKIIGQCRNLQDLNLSEVKGVTDEVMKDIAMGCTSLLYLNLSSCLISDSTLRYLA 369
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL---RGLSNLTSLSFRRNNAITAQGMKAFAGL---- 130
+ C+N+Q L +C + S+ GL +L +G + L IT G K F G+
Sbjct: 370 RYCTNMQYLSLAYCTKFSNKGLSYLANGKGCHKVIYLDLSGCEQITDDGYK-FVGMGCSS 428
Query: 131 INLVKL-DLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
+N + L DL R I + L + LN + ++D+ K L+ L L+I
Sbjct: 429 LNTIILNDLPGLRDACIQSLTSECRTLRTVSILNSPF---LSDTAYKSLALCRKLHKLRI 485
Query: 188 S-CSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQLSDDG 244
+++TD+ + L K +L + + CP +T L +L+++ L +N+ C
Sbjct: 486 EGNNRITDASVKVLAKSCSQLEHVYMVDCPRLTDLSLKALASVRHLNVINVADC------ 539
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
+++ + G +I V + ++ LNL +C ++ C +C
Sbjct: 540 ---------VRIQDTGVRQI-----VEGPSGSKIKELNLTNCVRVMPTVIRRFVYC-FRC 584
Query: 305 LELSDT------QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL-DA 357
L V +G+ L L NL SI++S ISD + L + ++ + + +
Sbjct: 585 HNLVYASFCYCEHVTDAGVELLGTLPNLISIDMSGCNISDHGVSSLGNNAMMRDVVIAEC 644
Query: 358 RQITDTGLAAL-TSLTGLTHLDL-FGARITDSGAAYLRNF----KNLRSLEICG-GGLTD 410
ITD GL + L +LD+ +TD+ ++N + LR+L + G LTD
Sbjct: 645 SAITDLGLQKMCQQCRFLENLDISHCTNLTDNA---IKNLVFCCRLLRTLNLSGCDKLTD 701
Query: 411 AGLTGLVS-------LNVSNSRITS-AGLRHL-KPLKNLRSLTLESCK-VTANDIKRLQS 460
+ L L L++SN + S LR+L K K L+SLT+ C+ +T N +++ Q
Sbjct: 702 SSLQYLSGVCHYLEMLDLSNCTLVSDKALRYLRKGCKRLQSLTILYCRNITKNAVQKFQM 761
Query: 461 R 461
+
Sbjct: 762 K 762
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 120/254 (47%), Gaps = 26/254 (10%)
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK-VTDSGIAYLK-GLQKLTLLNLEGC 214
L LN+K C +T +K + NL+ L +S K VTD + + G L LNL C
Sbjct: 299 LGHLNLKNCYNLTRESLKIIGQCRNLQDLNLSEVKGVTDEVMKDIAMGCTSLLYLNLSSC 358
Query: 215 PVTAACLDSLSALGS-LFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL---GFNEITDEC 268
++ + L L+ + + YL+L C + S+ G + G KV+ L G +ITD+
Sbjct: 359 LISDSTLRYLARYCTNMQYLSLAYCTKFSNKGLSYLANGKGCHKVIYLDLSGCEQITDDG 418
Query: 269 LVHL-KGLTNLESLNL-DSCGIGDEGLVNLTGLCN-------LKCLELSDTQVGSSGL-R 318
+ G ++L ++ L D G+ D + +LT C L LSDT S L R
Sbjct: 419 YKFVGMGCSSLNTIILNDLPGLRDACIQSLTSECRTLRTVSILNSPFLSDTAYKSLALCR 478
Query: 319 HLSGLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNL-DARQITDTGLAALTSLTGLTH 376
L L +E N I+D S++ LA S L+ + + D ++TD L AL S+ L
Sbjct: 479 KLHKL-RIEGNN----RITDASVKVLAKSCSQLEHVYMVDCPRLTDLSLKALASVRHLNV 533
Query: 377 LDLFG-ARITDSGA 389
+++ RI D+G
Sbjct: 534 INVADCVRIQDTGV 547
>gi|67473770|ref|XP_652634.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56469505|gb|EAL47248.1| leucine rich repeat protein [Entamoeba histolytica HM-1:IMSS]
gi|449707794|gb|EMD47387.1| Fbox/leucine rich repeat-containing protein [Entamoeba histolytica
KU27]
Length = 657
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 162/366 (44%), Gaps = 44/366 (12%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
LS SD G I+L C++L+ L N ++++ L+ L + NL +S + ++
Sbjct: 260 LSPSD----GFIYLAGCNSLRYLYLNES-EVTNYHLDVLARMDNLLGISLKGCPTLSDYS 314
Query: 124 MKAF-AGLI--NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
+ F G I +L +L++ H GL + L L L+I C+ I + PL+ L
Sbjct: 315 LTPFKTGPIRKSLEELNISDTMVTHIGLQVIARLKYLRVLDISHCDGI--KILSPLNSLK 372
Query: 181 NLKSLQISCSKVTDSGI--AYLKGLQKLTLLNLEGCPVTAACLDSL-SALGSLFYLNLNR 237
L+ L++S + + A+ + L L ++ P+ L + S +L +NL
Sbjct: 373 YLEVLRLSNVHINSDTLQDAFRIPPKYLQQLLVDARPIDDPLLTVICSKFPNLVSVNLKE 432
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNL 296
Q++ G E + L+ ++ + D+ +L +T+LE+++ + C I EG+ L
Sbjct: 433 SQITSRGVEALQMVKYLRYVDFSKTSVDDQVFEYLSKITSLETISFEDCQNISGEGVHVL 492
Query: 297 TGLCNLKCL--------------ELSD-----------TQVGSSGLRHLSGLTNLESINL 331
L L+ L E+ D Q+G ++++ + L+ ++L
Sbjct: 493 EPLRGLRVLNFNGCKNFSEYSLKEMEDLSVETLRVSGANQIGMEAWKYIAQIEQLKRLDL 552
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
SFT + D ++++ L+ + L +ITD + L + +D AR T+ Y
Sbjct: 553 SFTSVEDNGIQEMLKSKWLEVIYLRHTKITDKSIETLLCCNLIRKID---ARETNVKKQY 609
Query: 392 LRNFKN 397
NF N
Sbjct: 610 --NFAN 613
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 137/328 (41%), Gaps = 43/328 (13%)
Query: 144 IHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGL 203
+ + N++ L SL I ITDSD+ + LT LK L IS K I + +
Sbjct: 154 VSESIQNIRKYTSLTSLQIY---NITDSDIPSIGKLTGLKKLSISSKKFV-GKIEDMIDV 209
Query: 204 QKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNE 263
+LT L + P+ +L L ++ RC L G + + L + GF
Sbjct: 210 SQLTSLEISNAPLGPEFYYNLYLFPYLVFIGFTRCHLPISGVSAQTPLSQLSPSD-GF-- 266
Query: 264 ITDECLVHLKGLTNLESLNLDSCGIGDEGLV------NLTGLCNLKCLELSD---TQVGS 314
++L G +L L L+ + + L NL G+ C LSD T +
Sbjct: 267 ------IYLAGCNSLRYLYLNESEVTNYHLDVLARMDNLLGISLKGCPTLSDYSLTPFKT 320
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL---DARQITDTGLAALTSL 371
+R +LE +N+S T ++ L+ +A L L+ L++ D +I L+ L SL
Sbjct: 321 GPIRK-----SLEELNISDTMVTHIGLQVIARLKYLRVLDISHCDGIKI----LSPLNSL 371
Query: 372 TGLTHLDLFGARITDS--GAAYLRNFKNLRSLEICGGGLTDAGLT-------GLVSLNVS 422
L L L I A+ K L+ L + + D LT LVS+N+
Sbjct: 372 KYLEVLRLSNVHINSDTLQDAFRIPPKYLQQLLVDARPIDDPLLTVICSKFPNLVSVNLK 431
Query: 423 NSRITSAGLRHLKPLKNLRSLTLESCKV 450
S+ITS G+ L+ +K LR + V
Sbjct: 432 ESQITSRGVEALQMVKYLRYVDFSKTSV 459
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 120/286 (41%), Gaps = 36/286 (12%)
Query: 175 PLSGLTNLKSLQISCSKVTDS-GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
P+SG+ S Q S+++ S G YL G L L L VT LD L+ + +L +
Sbjct: 247 PISGV----SAQTPLSQLSPSDGFIYLAGCNSLRYLYLNESEVTNYHLDVLARMDNLLGI 302
Query: 234 NLNRCQ-LSDDGCEKFSKIG----SLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
+L C LSD F K G SL+ LN+ +T L + L L L++ C
Sbjct: 303 SLKGCPTLSDYSLTPF-KTGPIRKSLEELNISDTMVTHIGLQVIARLKYLRVLDISHCD- 360
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTN--LESINLSFTGISDGSLRKL-A 345
G + L L L L+ L LS+ + S L+ + L+ + + I D L + +
Sbjct: 361 GIKILSPLNSLKYLEVLRLSNVHINSDTLQDAFRIPPKYLQQLLVDARPIDDPLLTVICS 420
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR--SLEI 403
+L S+NL QIT G+ AL + L ++D + D YL +L S E
Sbjct: 421 KFPNLVSVNLKESQITSRGVEALQMVKYLRYVDFSKTSVDDQVFEYLSKITSLETISFED 480
Query: 404 CGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
C I+ G+ L+PL+ LR L CK
Sbjct: 481 CQN-------------------ISGEGVHVLEPLRGLRVLNFNGCK 507
>gi|407034343|gb|EKE37172.1| leucine rich repeat protein [Entamoeba nuttalli P19]
Length = 657
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 162/366 (44%), Gaps = 44/366 (12%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
LS SD G I+L C++L+ L N ++++ L+ L + NL +S + ++
Sbjct: 260 LSPSD----GFIYLAGCNSLRYLYLNES-EVTNYHLDVLARMDNLLGISLKGCPTLSDYS 314
Query: 124 MKAF-AGLI--NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
+ F G I +L +L++ H GL + L L L+I C+ I + PL+ L
Sbjct: 315 LTPFKTGPIRKSLEELNISDTMVTHIGLQIIVRLKYLRVLDISRCDGI--KILSPLNSLK 372
Query: 181 NLKSLQISCSKVTDSGI--AYLKGLQKLTLLNLEGCPVTAACLDSL-SALGSLFYLNLNR 237
L+ L++S V + A+ + L L ++ P+ L + S +L +NL
Sbjct: 373 YLEVLRLSNVHVNSDTLQDAFRIPPKYLQQLLVDARPIDDPLLTVICSKFPNLVSVNLKE 432
Query: 238 CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNL 296
Q++ G E + L+ ++ + D+ +L +T+LE+++ + C I EG+ L
Sbjct: 433 SQITSRGVEALQMVKYLRYVDFSKTSVDDQVFEYLSKITSLETISFEECQNISGEGVHVL 492
Query: 297 TGLCNLKCL--------------ELSD-----------TQVGSSGLRHLSGLTNLESINL 331
L L+ L E+ D Q+G ++++ + L+ ++L
Sbjct: 493 EPLRGLRVLNFNGCKNFSEYSLKEMEDLSVETLRVSGANQIGMEAWKYIAQIEQLKRLDL 552
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
SFT + D ++++ L+ + L +ITD + L + +D AR T+ Y
Sbjct: 553 SFTNVEDNGIQEMLKSKWLEVIYLRHTKITDKSIETLLCCNLIRKID---ARETNVEKQY 609
Query: 392 LRNFKN 397
NF N
Sbjct: 610 --NFSN 613
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 145/358 (40%), Gaps = 56/358 (15%)
Query: 144 IHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGL 203
+ + N+ L SL I ITDSD+ + LT LK L IS K I + +
Sbjct: 154 VSESIQNITKYTSLTSLQIY---NITDSDIPSIGKLTGLKKLSISSKKFI-GKIEDMIDV 209
Query: 204 QKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL---------------SDDGCEKF 248
+LT L + P+ +L L ++ RC L DG
Sbjct: 210 SQLTSLEISNAPLGPEFYYNLYLFPYLVFIGFTRCHLPISGVSAQTPLSQLSPSDGFIYL 269
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNL-TGLC--NLKC 304
+ SL+ L L +E+T+ L L + NL ++L C + D L TG +L+
Sbjct: 270 AGCNSLRYLYLNESEVTNYHLDVLARMDNLLGISLKGCPTLSDYSLTPFKTGPIRKSLEE 329
Query: 305 LELSDTQVGSSGLR-----------------------HLSGLTNLESINLSFTGISDGSL 341
L +SDT V GL+ L+ L LE + LS ++ +L
Sbjct: 330 LNISDTMVTHIGLQIIVRLKYLRVLDISRCDGIKILSPLNSLKYLEVLRLSNVHVNSDTL 389
Query: 342 RKLAGLSS--LKSLNLDARQITDTGLAALTS-LTGLTHLDLFGARITDSGAAYLRNFKNL 398
+ + L+ L +DAR I D L + S L ++L ++IT G L+ K L
Sbjct: 390 QDAFRIPPKYLQQLLVDARPIDDPLLTVICSKFPNLVSVNLKESQITSRGVEALQMVKYL 449
Query: 399 RSLEICGGGLTD------AGLTGLVSLNVSN-SRITSAGLRHLKPLKNLRSLTLESCK 449
R ++ + D + +T L +++ I+ G+ L+PL+ LR L CK
Sbjct: 450 RYVDFSKTSVDDQVFEYLSKITSLETISFEECQNISGEGVHVLEPLRGLRVLNFNGCK 507
>gi|290980573|ref|XP_002673006.1| predicted protein [Naegleria gruberi]
gi|284086587|gb|EFC40262.1| predicted protein [Naegleria gruberi]
Length = 361
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 12/273 (4%)
Query: 149 VNLKGLMKLESLN----IKWCNCITDSDM------KPLSGLTNLKSLQISCSKVTDSGIA 198
+NLK L K + LN +K N S + + L G+ +LK + I GI
Sbjct: 73 INLKSLAKSQYLNRIVSLKTVNSFDGSIIDNVELCEILQGMKDLKEVWIYKQLKGVKGIK 132
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN 258
+ L++LT+L++ + + L+ L L L + + DD + S++ L L+
Sbjct: 133 KIGSLKQLTILDVSYNDIGYGGVKWLTQLSQLTELRIGNNSIFDDDIKMISEMKQLTKLD 192
Query: 259 LGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
L I D + +L L NL SL L + DE + +++ L L L + + Q+G+ G +
Sbjct: 193 LSNCRIMD-GVQYLSKLENLTSLRLCGNRLTDERVESISNLKQLTELYIGENQLGTEGAK 251
Query: 319 HLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 378
+ +T L +N+ IS G ++ L L L LN+ +I DTG+ ++ + LT L
Sbjct: 252 SIGNMTQLTRLNIQQNRISQG-VKYLEKLDRLTDLNISKNKIGDTGVIIISEMNQLTKLT 310
Query: 379 LFGARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
+ +I++ GA L + L L+I +++
Sbjct: 311 IRDNKISEEGAKTLGLLQKLTYLDISDNSVSNV 343
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 114/230 (49%), Gaps = 4/230 (1%)
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
+K + L L L +S + + G+ +L L +LT L + + + +S + L
Sbjct: 131 IKKIGSLKQLTILDVSYNDIGYGGVKWLTQLSQLTELRIGNNSIFDDDIKMISEMKQLTK 190
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L+L+ C++ D G + SK+ +L L L N +TDE + + L L L + +G EG
Sbjct: 191 LDLSNCRIMD-GVQYLSKLENLTSLRLCGNRLTDERVESISNLKQLTELYIGENQLGTEG 249
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
++ + L L + ++ S G+++L L L +N+S I D + ++ ++ L
Sbjct: 250 AKSIGNMTQLTRLNIQQNRI-SQGVKYLEKLDRLTDLNISKNKIGDTGVIIISEMNQLTK 308
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
L + +I++ G L L LT+LD+ +++ A ++ KN++SL+
Sbjct: 309 LTIRDNKISEEGAKTLGLLQKLTYLDISDNSVSNVTANSMQ--KNMKSLK 356
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 80/185 (43%), Gaps = 32/185 (17%)
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L G+ +LK + + G G++ + L L +++S+ I G ++ L LS L L +
Sbjct: 110 LQGMKDLKEVWIYKQLKGVKGIKKIGSLKQLTILDVSYNDIGYGGVKWLTQLSQLTELRI 169
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----- 410
I D + ++ + LT LDL RI D G YL +NL SL +CG LTD
Sbjct: 170 GNNSIFDDDIKMISEMKQLTKLDLSNCRIMD-GVQYLSKLENLTSLRLCGNRLTDERVES 228
Query: 411 -------------------------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
+T L LN+ +RI S G+++L+ L L L +
Sbjct: 229 ISNLKQLTELYIGENQLGTEGAKSIGNMTQLTRLNIQQNRI-SQGVKYLEKLDRLTDLNI 287
Query: 446 ESCKV 450
K+
Sbjct: 288 SKNKI 292
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 23/218 (10%)
Query: 244 GCEKFSKIGSLK---VLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
G + KIGSLK +L++ +N+I + L L+ L L + + I D+ + ++ +
Sbjct: 127 GVKGIKKIGSLKQLTILDVSYNDIGYGGVKWLTQLSQLTELRIGNNSIFDDDIKMISEMK 186
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQI 360
L L+LS+ ++ G+++LS L NL S+ L ++D + ++ L L L + Q+
Sbjct: 187 QLTKLDLSNCRI-MDGVQYLSKLENLTSLRLCGNRLTDERVESISNLKQLTELYIGENQL 245
Query: 361 TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLN 420
G ++ ++T LT L++ RI+ G YL L L LN
Sbjct: 246 GTEGAKSIGNMTQLTRLNIQQNRIS-QGVKYLEK------------------LDRLTDLN 286
Query: 421 VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
+S ++I G+ + + L LT+ K++ K L
Sbjct: 287 ISKNKIGDTGVIIISEMNQLTKLTIRDNKISEEGAKTL 324
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 11/206 (5%)
Query: 94 ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG 153
I GG++ L LS LT L NN+I +K + + L KLDL C RI G+ L
Sbjct: 150 IGYGGVKWLTQLSQLTELRIG-NNSIFDDDIKMISEMKQLTKLDLSNC-RIMDGVQYLSK 207
Query: 154 LMKLESLNIKWC-NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
L L SL + C N +TD ++ +S L L L I +++ G + + +LT LN++
Sbjct: 208 LENLTSL--RLCGNRLTDERVESISNLKQLTELYIGENQLGTEGAKSIGNMTQLTRLNIQ 265
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
++ + L L L LN+++ ++ D G S++ L L + N+I++E L
Sbjct: 266 QNRISQG-VKYLEKLDRLTDLNISKNKIGDTGVIIISEMNQLTKLTIRDNKISEEGAKTL 324
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTG 298
L L L+ I D + N+T
Sbjct: 325 GLLQKLTYLD-----ISDNSVSNVTA 345
>gi|290993931|ref|XP_002679586.1| hypothetical protein NAEGRDRAFT_47566 [Naegleria gruberi]
gi|284093203|gb|EFC46842.1| hypothetical protein NAEGRDRAFT_47566 [Naegleria gruberi]
Length = 675
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 137/280 (48%), Gaps = 41/280 (14%)
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLT-NLKSLQIS-CSKVTDSGIAYLKGLQKLTLLN 210
GL L +LN++ C+ ITD+ +K L+ ++ NL L + C+KV DS ++Y+ +L L+
Sbjct: 337 GLQTLHTLNVQGCHYITDNGVKYLTYISQNLTHLNLRGCTKVNDSAMSYISQFSQLNYLD 396
Query: 211 LEGC-PVTAACLDSLSALG---SLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNEIT 265
+ GC VT + LS L YL+L C Q++D+G S++ L+ L L
Sbjct: 397 MTGCVNVTDLGVKHLSQSACKTKLKYLDLTFCHQVTDEGVRYLSEMTELEDLTL------ 450
Query: 266 DECLVHL--KGLT-------NLESLNLDSC------GIGDEGLVNLTGLCNLKCLELSDT 310
+C H+ KGLT N+ LNL C G+ L L L + C SD
Sbjct: 451 -QCCRHITAKGLTQLVNSCQNIRVLNLTGCHLLEISGVRSGSLPKLEKLSMMGCKLTSD- 508
Query: 311 QVGSSGLRHLSGLT-NLESINLSFTG-ISDGSL-RKLAGLSSLKSLNLDA-RQITDTGLA 366
+ LR +S T NL+ + LSF+ I+DG + R + +L LNL ITD L
Sbjct: 509 ----NCLRVISDWTCNLKELVLSFSDMITDGGIERVIINSKNLSHLNLKKCSNITDKSLE 564
Query: 367 ALTSLTG--LTHLDLFGAR-ITDSGAAYLRNFKNLRSLEI 403
++ + +L+L G R T+ G YL N +L+ I
Sbjct: 565 CISKHLSNVVEYLNLTGVRGFTNGGLKYLENCTSLKEFVI 604
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 137/278 (49%), Gaps = 36/278 (12%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDC---SNLQSLDFNFCIQISDGGL 99
VND M I SQ S L +D++G +VTD G+ HL + L+ LD FC Q++D G+
Sbjct: 378 VNDSAMSYI-SQFSQLNYLDMTGCVNVTDLGVKHLSQSACKTKLKYLDLTFCHQVTDEGV 436
Query: 100 EHLRGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
+L ++ L L+ + ITA+G+ N+ L+L C + V L KLE
Sbjct: 437 RYLSEMTELEDLTLQCCRHITAKGLTQLVNSCQNIRVLNLTGCHLLEISGVRSGSLPKLE 496
Query: 159 SLNIKWCNCITDSDMKPLSGLT-NLKSLQISCSK-VTDSGIAYLKGLQKLTLLNLEGCPV 216
L++ C +D+ ++ +S T NLK L +S S +TD GI + ++N +
Sbjct: 497 KLSMMGCKLTSDNCLRVISDWTCNLKELVLSFSDMITDGGI-------ERVIINSKN--- 546
Query: 217 TAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGS--LKVLNL-GFNEITDECLVHL 272
L +LNL +C ++D E SK S ++ LNL G T+ L +L
Sbjct: 547 -------------LSHLNLKKCSNITDKSLECISKHLSNVVEYLNLTGVRGFTNGGLKYL 593
Query: 273 KGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD 309
+ T+L+ + C + +EGL +L +L+ L++S+
Sbjct: 594 ENCTSLKEFVIQRCIHVNNEGLAHLAYCPSLEILDISE 631
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 20/239 (8%)
Query: 251 IGSLKVLNL-GFNEITDECLVHLKGLT-NLESLNLDSC-GIGDEGLVNLTGLCNLKCLEL 307
+ +L LN+ G + ITD + +L ++ NL LNL C + D + ++ L L++
Sbjct: 338 LQTLHTLNVQGCHYITDNGVKYLTYISQNLTHLNLRGCTKVNDSAMSYISQFSQLNYLDM 397
Query: 308 SD-TQVGSSGLRHLSG---LTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQIT 361
+ V G++HLS T L+ ++L+F ++D +R L+ ++ L+ L L R IT
Sbjct: 398 TGCVNVTDLGVKHLSQSACKTKLKYLDLTFCHQVTDEGVRYLSEMTELEDLTLQCCRHIT 457
Query: 362 DTGLAALT-SLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLN 420
GL L S + L+L G + + + L L + G LT ++S
Sbjct: 458 AKGLTQLVNSCQNIRVLNLTGCHLLEISGVRSGSLPKLEKLSMMGCKLTSDNCLRVISDW 517
Query: 421 VSNSR---------ITSAGL-RHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSF 469
N + IT G+ R + KNL L L+ C + S+ L N+V +
Sbjct: 518 TCNLKELVLSFSDMITDGGIERVIINSKNLSHLNLKKCSNITDKSLECISKHLSNVVEY 576
>gi|407859465|gb|EKG07051.1| hypothetical protein TCSYLVIO_001824 [Trypanosoma cruzi]
Length = 929
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 159/350 (45%), Gaps = 13/350 (3%)
Query: 60 LSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAI 119
LS+ +S S L H C+ L+ LD ++ +G + L+ L+ LS I
Sbjct: 346 LSLCMSSSVSCTRFLRHRSLCA-LRDLDLSYTQVTEEGMYRDVSKLNKLSRLSLEGCRKI 404
Query: 120 TAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGL 179
+ ++ L L L+L + L L+ +L L+++WC IT +K L G
Sbjct: 405 --ESLQWLRALNQLRVLNLGYSSVTDDSLTALRFCPELAKLDLQWCGRITS--LKYLVGA 460
Query: 180 --TNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
+L+ L ++ + VTD G+ LK L L++LEGC + L+ L L L +++ R
Sbjct: 461 LCDSLRELNLTETSVTDEGLVPLKDFAALELISLEGCGAVSD-LNVLCNLTRLREMDVGR 519
Query: 238 CQLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
++++ G S+ +L+V+ + +TD L L LE ++L C + +EG+ L
Sbjct: 520 TRVTNRGVVSLSQCQALRVMRMRQCYRLTDANF--LGALQQLEEVDLSDCPVTNEGIAGL 577
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
G +L+ L L S + L GL +L ++L T + + LA L +L +
Sbjct: 578 FGARSLRKLRLQSCH-AVSDVNFLGGLEHLMLLDLHHTTVDEEGSVGLAQCPQLMTLIMH 636
Query: 357 ARQITD-TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
+ + A L L LDL ++T ++LR L +L + G
Sbjct: 637 SVLVHSLQQWNAALFLPRLKRLDLSTTKVTSDALSFLRMCPVLETLSLRG 686
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 187/440 (42%), Gaps = 81/440 (18%)
Query: 20 LTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLK 78
+T+ SL A R C L L L Q+ G ++ + SL ++L+ + VTD GL+ LK
Sbjct: 426 VTDDSLTALRFCPELAKLDL-QWCGRITSLKYLVGALCDSLRELNLTETSVTDEGLVPLK 484
Query: 79 DCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL 138
D + L+ + C +SD L L NLT L ++D+
Sbjct: 485 DFAALELISLEGCGAVSD-----LNVLCNLTRLR----------------------EMDV 517
Query: 139 ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIA 198
R + G+V+L L + ++ C +TD++ L L L+ + +S VT+ GIA
Sbjct: 518 GRTRVTNRGVVSLSQCQALRVMRMRQCYRLTDANF--LGALQQLEEVDLSDCPVTNEGIA 575
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK-------- 250
L G + L L L+ C + ++ L L L L+L+ + ++G ++
Sbjct: 576 GLFGARSLRKLRLQSCHAVSD-VNFLGGLEHLMLLDLHHTTVDEEGSVGLAQCPQLMTLI 634
Query: 251 -----------------IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+ LK L+L ++T + L L+ LE+L+L C + +
Sbjct: 635 MHSVLVHSLQQWNAALFLPRLKRLDLSTTKVTSDALSFLRMCPVLETLSLRGC----KNI 690
Query: 294 VNL----------TGLCNL--KCLELSDTQVGS--SGLRHLS--GLTNLESINLSFTGIS 337
+L G+C + + +E DT VG +G S G + +E++ ++ I
Sbjct: 691 THLDFLILQPSSGAGVCAIVPRDVEPHDT-VGDIIAGKEKNSDDGPSPIETMTINDGVIK 749
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGAR-ITDSGAAYLRNFK 396
+ + L+ L L +TD GL AL GL L L + TD A LR
Sbjct: 750 SAAAAAVVSRHRLRELTLSDTGVTDEGLRALQYCPGLERLRLAHCKNFTD--VAVLRWLS 807
Query: 397 NLRSLEICGGGLTDAGLTGL 416
L+ L++ G+T +GL L
Sbjct: 808 QLKELDLSATGVTGSGLAKL 827
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 143/337 (42%), Gaps = 79/337 (23%)
Query: 179 LTNLKSLQISCSKVTDSGIAY-LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNR 237
L L+ L +S ++VT+ G+ + L KL+ L+LEGC + L L AL L LNL
Sbjct: 365 LCALRDLDLSYTQVTEEGMYRDVSKLNKLSRLSLEGCRKIES-LQWLRALNQLRVLNLGY 423
Query: 238 CQLSDDG------CEKFSKIG-------------------SLKVLNLGFNEITDECLVHL 272
++DD C + +K+ SL+ LNL +TDE LV L
Sbjct: 424 SSVTDDSLTALRFCPELAKLDLQWCGRITSLKYLVGALCDSLRELNLTETSVTDEGLVPL 483
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNL---KCLELSDTQVGSSGLRHLS-------- 321
K LE ++L+ CG + +L LCNL + +++ T+V + G+ LS
Sbjct: 484 KDFAALELISLEGCG----AVSDLNVLCNLTRLREMDVGRTRVTNRGVVSLSQCQALRVM 539
Query: 322 ---------------GLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGL 365
L LE ++LS +++ + L G SL+ L L + ++D
Sbjct: 540 RMRQCYRLTDANFLGALQQLEEVDLSDCPVTNEGIAGLFGARSLRKLRLQSCHAVSDVNF 599
Query: 366 AALTSLTGLTHL---DLFGARITDSGAAYLRNFKNL----------RSLEICGGGLTDAG 412
L GL HL DL + + G+ L L SL+ L
Sbjct: 600 -----LGGLEHLMLLDLHHTTVDEEGSVGLAQCPQLMTLIMHSVLVHSLQQWNAALF--- 651
Query: 413 LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
L L L++S +++TS L L+ L +L+L CK
Sbjct: 652 LPRLKRLDLSTTKVTSDALSFLRMCPVLETLSLRGCK 688
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 185/441 (41%), Gaps = 61/441 (13%)
Query: 58 SLLSVDLSGSDVTDSGLIH-LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+L +DLS + VT+ G+ + + L L C +I L+ LR L+ L L+
Sbjct: 367 ALRDLDLSYTQVTEEGMYRDVSKLNKLSRLSLEGCRKIE--SLQWLRALNQLRVLNLG-Y 423
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHG-------------------------GLVNL 151
+++T + A L KLDL+ C RI GLV L
Sbjct: 424 SSVTDDSLTALRFCPELAKLDLQWCGRITSLKYLVGALCDSLRELNLTETSVTDEGLVPL 483
Query: 152 KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
K LE ++++ C + SD+ L LT L+ + + ++VT+ G+ L Q L ++ +
Sbjct: 484 KDFAALELISLEGCGAV--SDLNVLCNLTRLREMDVGRTRVTNRGVVSLSQCQALRVMRM 541
Query: 212 EGC-PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL-GFNEITDECL 269
C +T A + L AL L ++L+ C ++++G SL+ L L + ++D +
Sbjct: 542 RQCYRLTDA--NFLGALQQLEEVDLSDCPVTNEGIAGLFGARSLRKLRLQSCHAVSD--V 597
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG---LTNL 326
L GL +L L+L + +EG V L L L + V S L+ + L L
Sbjct: 598 NFLGGLEHLMLLDLHHTTVDEEGSVGLAQCPQLMTLIMHSVLVHS--LQQWNAALFLPRL 655
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITD-----------TGLAALTSLTGL 374
+ ++LS T ++ +L L L++L+L + IT G+ A+
Sbjct: 656 KRLDLSTTKVTSDALSFLRMCPVLETLSLRGCKNITHLDFLILQPSSGAGVCAIVPRDVE 715
Query: 375 THLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG------LVSLNVSNSRITS 428
H D G I + ++ I G + A L L +S++ +T
Sbjct: 716 PH-DTVGDIIAGKEKNSDDGPSPIETMTINDGVIKSAAAAAVVSRHRLRELTLSDTGVTD 774
Query: 429 AGLRHLKPLKNLRSLTLESCK 449
GLR L+ L L L CK
Sbjct: 775 EGLRALQYCPGLERLRLAHCK 795
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 137/343 (39%), Gaps = 57/343 (16%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+ L +D+ + VT+ G++ L C L+ + C +++D L L L + +
Sbjct: 510 TRLREMDVGRTRVTNRGVVSLSQCQALRVMRMRQCYRLTDANF--LGALQQLEEVDLS-D 566
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIH-----GGLVNLK---------------GLMK 156
+T +G+ G +L KL L+ C + GGL +L GL +
Sbjct: 567 CPVTNEGIAGLFGARSLRKLRLQSCHAVSDVNFLGGLEHLMLLDLHHTTVDEEGSVGLAQ 626
Query: 157 LESLNIKWCNCITDSDMKPLSG---LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
L + + ++ + L LK L +S +KVT +++L+ L L+L G
Sbjct: 627 CPQLMTLIMHSVLVHSLQQWNAALFLPRLKRLDLSTTKVTSDALSFLRMCPVLETLSLRG 686
Query: 214 CPVTAACLDSL-------SALGSLFYLNLNRCQLSDD---GCEKFSKIGSLKVLNLGFNE 263
C LD L + + ++ ++ D G EK S G + + N+
Sbjct: 687 C-KNITHLDFLILQPSSGAGVCAIVPRDVEPHDTVGDIIAGKEKNSDDGPSPIETMTIND 745
Query: 264 --ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL---TGLCNLK---CLELSDTQVGSS 315
I + L L L G+ DEGL L GL L+ C +D V
Sbjct: 746 GVIKSAAAAAVVSRHRLRELTLSDTGVTDEGLRALQYCPGLERLRLAHCKNFTDVAV--- 802
Query: 316 GLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L L+ L+ ++LS TG++ L KL+ S NL AR
Sbjct: 803 ----LRWLSQLKELDLSATGVTGSGLAKLS-----PSGNLPAR 836
>gi|85679222|gb|ABC72027.1| InlA [Listeria monocytogenes]
Length = 791
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 169/366 (46%), Gaps = 54/366 (14%)
Query: 74 LIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINL 133
+ LKD + L + N QI+D + L L+NLT L+ NN IT + A L NL
Sbjct: 112 ITPLKDLTKLVDIVMNNN-QITD--ISPLANLTNLTGLTLF-NNQIT--DIDALKNLTNL 165
Query: 134 VKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
+L++ T + L GL L+ L+ N +TD +KPL+ LT L+ L IS +KV+
Sbjct: 166 NRLEITGNTI--SDISVLSGLTSLQQLSF--GNQVTD--LKPLANLTTLERLDISSNKVS 219
Query: 194 D-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIG 252
D S +A L L++L N + +T L L +L L+LN QL D G + +
Sbjct: 220 DISVLAKLTNLERLIATNNQISDITP-----LGILTNLDELSLNGNQLKDIGT--LASLT 272
Query: 253 SLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQV 312
+L L++ N+I++ L L GLT L L L I + + + GL L LEL + Q+
Sbjct: 273 NLTSLDVANNQISN--LAPLSGLTKLTELELGYNQISN--ISPIEGLTALTSLELHENQL 328
Query: 313 GSSGLRHLSGLTNLESINLSFTGISD----GSLRK----------------LAGLSSLKS 352
+ +S L NL + L F ISD SL K LA L+++
Sbjct: 329 --EDISPISNLKNLTYLALYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 386
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN------FKNLRSLEICGG 406
L+ QI+D L L +LT ++ L L T+ Y N KN+ I
Sbjct: 387 LSAAHNQISD--LTPLANLTRISELGLNDQAWTNPPVNYKTNVSIPNTVKNVTGALIAPA 444
Query: 407 GLTDAG 412
++D G
Sbjct: 445 TISDGG 450
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 112/226 (49%), Gaps = 43/226 (19%)
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNL 302
DG E + +L +N GFN++TD + LK LT L + +++ I D + L L NL
Sbjct: 91 DGLEY---LNNLTQINFGFNQLTD--ITPLKDLTKLVDIVMNNNQITD--ISPLANLTNL 143
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
L L + Q+ + + L LTNL + ++ ISD S+ L+GL+SL+ L+ Q+TD
Sbjct: 144 TGLTLFNNQI--TDIDALKNLTNLNRLEITGNTISDISV--LSGLTSLQQLSF-GNQVTD 198
Query: 363 TGLAALTSLTGLTHLDLFGARITD-SGAAYLRNFK-------------------NLRSLE 402
L L +LT L LD+ +++D S A L N + NL L
Sbjct: 199 --LKPLANLTTLERLDISSNKVSDISVLAKLTNLERLIATNNQISDITPLGILTNLDELS 256
Query: 403 ICGGGLTDAG----LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
+ G L D G LT L SL+V+N++I+ +L PL L LT
Sbjct: 257 LNGNQLKDIGTLASLTNLTSLDVANNQIS-----NLAPLSGLTKLT 297
>gi|124002318|ref|ZP_01687171.1| leucine-rich protein [Microscilla marina ATCC 23134]
gi|123992147|gb|EAY31515.1| leucine-rich protein [Microscilla marina ATCC 23134]
Length = 1282
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 198/470 (42%), Gaps = 91/470 (19%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L ++L +D+ + +L L+SL+ F S LE+L L+ LT LS N
Sbjct: 219 LKQLELEENDI--KKIENLHHLPQLKSLNLRFN---SFEKLENLDALTELTELSLGYNGI 273
Query: 119 ITAQGMKA----------FAGLINLVKLD----LERCTRIHGGLVNLKGLMKLESLNIKW 164
+G++ F + L LD LE+ H G+ ++ L KL L
Sbjct: 274 SKIEGLEKLTKLKMLGLMFNRVTKLENLDTLTELEKLWMNHTGIKKIENLDKLTKLTHLS 333
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA-ACLDS 223
C + ++ L LT L SL + +K+ S I L+ L LT L ++G V LD+
Sbjct: 334 LMCSKVTKIENLEALTQLTSLSLHATKI--SKIENLEALTNLTKLRVDGNKVAKIENLDN 391
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIG---SLKVLNLGFNEITDECLVHLKGLTNLES 280
L+ L L L + K +G L+ L+LG IT + +L+GL LE
Sbjct: 392 LTQLDDLM--------LGGNPISKIENLGHLIKLRKLDLGGLAITK--IENLEGLRTLEQ 441
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS-SGLRHLSGLTNLESINLSFT----- 334
L+L I E + NL GL L+ LEL T+V L HL LT L+ + T
Sbjct: 442 LDLGGSQI--ETIENLEGLTGLQKLELRATKVSKIENLNHLPALTELDLSETAITKIEGL 499
Query: 335 ----GISDGSLRK--------LAGLSSLKSLNLDARQITD----TGLAALTS-------- 370
G+ + SL K LAGLS L+ L+L A ++ TGL L
Sbjct: 500 TGLEGLKELSLSKNKITKIENLAGLSKLEKLSLCASNLSKIENLTGLPKLRELCLEKNAI 559
Query: 371 --------LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVS 418
L L LDL +IT L L L + L AG+TGL
Sbjct: 560 ECLENLRGLPALKELDLNNNQITHIQPNALPT--QLAELNLSQNQLIKVEHLAGVTGLTE 617
Query: 419 LNVSNSRITSAGLRHLKPLKNLRSL-TLESCKVTANDIKRLQS-RDLPNL 466
L++S + I+ ++N L LE+ ++ N I RL++ LPNL
Sbjct: 618 LDLSENNISK--------IENFEDLPALETLDLSYNKITRLENLTALPNL 659
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
+L +DL GS + + +L+ + LQ L+ ++S +E+L L LT L
Sbjct: 438 TLEQLDLGGSQI--ETIENLEGLTGLQKLELR-ATKVSK--IENLNHLPALTELDLSETA 492
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITD-SDMKPL 176
+G+ GL L L + T+I NL GL KLE L++ C ++ S ++ L
Sbjct: 493 ITKIEGLTGLEGLKEL-SLSKNKITKIE----NLAGLSKLEKLSL----CASNLSKIENL 543
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+GL L+ L + + + + L+GL L L+L +T ++L L LNL+
Sbjct: 544 TGLPKLRELCLEKNAI--ECLENLRGLPALKELDLNNNQITHIQPNALPT--QLAELNLS 599
Query: 237 RCQL-----------------SDDGC---EKFSKIGSLKVLNLGFNEITDECLVHLKGLT 276
+ QL S++ E F + +L+ L+L +N+IT L +L L
Sbjct: 600 QNQLIKVEHLAGVTGLTELDLSENNISKIENFEDLPALETLDLSYNKITR--LENLTALP 657
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS 314
NL +N+ I + +T L+ L+L Q+ +
Sbjct: 658 NLREVNIYQNQITEIATDAVTR--QLQELDLEQNQIST 693
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 26/176 (14%)
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
LTNL+ L+L+ I E + NL L L+ L L + G +L+ LT L + LS
Sbjct: 106 LTNLQYLDLEENDI--EVIENLDHLARLEYLNLRGNAIEKIG--NLNALTQLVHLELS-- 159
Query: 335 GISDGSLRKLAGLSSLKSL-NLDARQITDTGLAALTSLTGLTHLDL----FGARITDSGA 389
SL ++ L+ LK L NLD R+ + L LT LT LDL FG
Sbjct: 160 ---SNSLERVENLNHLKHLQNLDLRENNIKKIENLAGLTALTRLDLGYNGFGK------I 210
Query: 390 AYLRNFKNLRSLEICGGGLTD-AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
L N L+ LE+ + L L L N R S + L+NL +LT
Sbjct: 211 EGLHNLPRLKQLELEENDIKKIENLHHLPQLKSLNLRFNS-----FEKLENLDALT 261
>gi|290996875|ref|XP_002681007.1| leucine-rich repeat family protein [Naegleria gruberi]
gi|284094630|gb|EFC48263.1| leucine-rich repeat family protein [Naegleria gruberi]
Length = 398
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 27/286 (9%)
Query: 162 IKWCNCIT-DSDMKPLSGLTNLKSLQISCS--------------KVTDSGIAYL------ 200
++ C C+T D D++P+S ++ L L IS + K+ + G ++
Sbjct: 84 LELCECLTGDKDIRPISRMSQLTKLNISKNAKYHLSDIFDMKQLKILEIGENFIGDEQAE 143
Query: 201 ---KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
L++LT+L + + + + LS L L L+L+ +D + +K+ LK L
Sbjct: 144 LLSNHLKQLTILRINNNLIHSQGVKHLSKLDQLTELDLSGNAFNDTIGSEIAKMEQLKTL 203
Query: 258 N---LGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS 314
+ L + + L L SL++ + IGDEG ++ L L L + ++G
Sbjct: 204 HVNKLARHRMGSRLGSQFGNLFQLTSLSISNNYIGDEGANEISNLTQLTELYVHGAEIGY 263
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 374
G R LS L L +++S I D +R LS L L + +I D G ++ + L
Sbjct: 264 RGARSLSVLHQLTKLDISTNHIGDEGVRLFKQLSKLTELVVFNNRIGDVGAQLISEIPQL 323
Query: 375 THLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLN 420
T L + +I + GA + L+ L I G + D G L +N
Sbjct: 324 TSLVVSSNQIGNEGAKSISQMSKLKYLSINGNQIGDQGAKLLSEMN 369
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 125/284 (44%), Gaps = 22/284 (7%)
Query: 68 DVTDSGLIHLKDCSNLQSLDFNFCIQISDG--GLEHLRGLSN-LTSLSFRR--NNAITAQ 122
+++ + HL D +++ L ++I + G E LSN L L+ R NN I +Q
Sbjct: 109 NISKNAKYHLSDIFDMKQLK---ILEIGENFIGDEQAELLSNHLKQLTILRINNNLIHSQ 165
Query: 123 GMKAFAGLINLVKLDLERCTRIHGGLVNL---KGLMKLESLNIKWCNCITDSDM-----K 174
G+K + L L +LDL G N + K+E L N + M
Sbjct: 166 GVKHLSKLDQLTELDLS------GNAFNDTIGSEIAKMEQLKTLHVNKLARHRMGSRLGS 219
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L L SL IS + + D G + L +LT L + G + SLS L L L+
Sbjct: 220 QFGNLFQLTSLSISNNYIGDEGANEISNLTQLTELYVHGAEIGYRGARSLSVLHQLTKLD 279
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
++ + D+G F ++ L L + N I D + + L SL + S IG+EG
Sbjct: 280 ISTNHIGDEGVRLFKQLSKLTELVVFNNRIGDVGAQLISEIPQLTSLVVSSNQIGNEGAK 339
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
+++ + LK L ++ Q+G G + LS + L I + IS+
Sbjct: 340 SISQMSKLKYLSINGNQIGDQGAKLLSEMNQLRRIEVYGNNISN 383
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 155/340 (45%), Gaps = 35/340 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA-QGMKAFAGLINLVK 135
+K NL+SL C I + L+ + +++LT L +T + ++ + + L K
Sbjct: 51 IKMMKNLKSLSIGNC-SIGEEDLKFIGEMNHLTELELCE--CLTGDKDIRPISRMSQLTK 107
Query: 136 LDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG-LTNLKSLQISCSKVTD 194
L++ + + H L ++ + +L+ L I N I D + LS L L L+I+ + +
Sbjct: 108 LNISKNAKYH--LSDIFDMKQLKILEI-GENFIGDEQAELLSNHLKQLTILRINNNLIHS 164
Query: 195 SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSL 254
G+ +L L +LT L+L G ++ + L L++N+ G S+ G+L
Sbjct: 165 QGVKHLSKLDQLTELDLSGNAFNDTIGSEIAKMEQLKTLHVNKLARHRMGSRLGSQFGNL 224
Query: 255 KVL-----------NLGFNEITD-----ECLVH-----------LKGLTNLESLNLDSCG 287
L + G NEI++ E VH L L L L++ +
Sbjct: 225 FQLTSLSISNNYIGDEGANEISNLTQLTELYVHGAEIGYRGARSLSVLHQLTKLDISTNH 284
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
IGDEG+ L L L + + ++G G + +S + L S+ +S I + + ++ +
Sbjct: 285 IGDEGVRLFKQLSKLTELVVFNNRIGDVGAQLISEIPQLTSLVVSSNQIGNEGAKSISQM 344
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDS 387
S LK L+++ QI D G L+ + L ++++G I++
Sbjct: 345 SKLKYLSINGNQIGDQGAKLLSEMNQLRRIEVYGNNISNE 384
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 23/235 (9%)
Query: 50 DVIASQGSSLLS-------VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGL--E 100
++I SQG LS +DLSG+ D+ + L++L N + G
Sbjct: 160 NLIHSQGVKHLSKLDQLTELDLSGNAFNDTIGSEIAKMEQLKTLHVNKLARHRMGSRLGS 219
Query: 101 HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG------L 154
L LTSLS NN I +G + L L +L +HG + +G L
Sbjct: 220 QFGNLFQLTSLSIS-NNYIGDEGANEISNLTQLTEL------YVHGAEIGYRGARSLSVL 272
Query: 155 MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC 214
+L L+I N I D ++ L+ L L + +++ D G + + +LT L +
Sbjct: 273 HQLTKLDIS-TNHIGDEGVRLFKQLSKLTELVVFNNRIGDVGAQLISEIPQLTSLVVSSN 331
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
+ S+S + L YL++N Q+ D G + S++ L+ + + N I++E
Sbjct: 332 QIGNEGAKSISQMSKLKYLSINGNQIGDQGAKLLSEMNQLRRIEVYGNNISNEIF 386
>gi|290980344|ref|XP_002672892.1| predicted protein [Naegleria gruberi]
gi|284086472|gb|EFC40148.1| predicted protein [Naegleria gruberi]
Length = 283
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%)
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
+ L SLN++ IG EG ++G+ L L +S +G G + +S + L SIN+S+
Sbjct: 131 MKELTSLNINGNVIGAEGAKFISGMKQLTSLNISYNVIGDKGAKLISEMKQLISINISYN 190
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
I + ++ + L SLN+ I DTG ++ + LT LD++ RI GA Y+
Sbjct: 191 RICGEGAKFISEMKQLTSLNIANNSIGDTGAKFISGMKELTSLDIYNNRIGREGAKYISE 250
Query: 395 FKNLRSLEICGGGLTD 410
K L SL+I G + D
Sbjct: 251 MKQLTSLDIGGNQIGD 266
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 81/155 (52%)
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN 258
++ +++LT LN+ G + A +S + L LN++ + D G + S++ L +N
Sbjct: 127 FISEMKELTSLNINGNVIGAEGAKFISGMKQLTSLNISYNVIGDKGAKLISEMKQLISIN 186
Query: 259 LGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
+ +N I E + + L SLN+ + IGD G ++G+ L L++ + ++G G +
Sbjct: 187 ISYNRICGEGAKFISEMKQLTSLNIANNSIGDTGAKFISGMKELTSLDIYNNRIGREGAK 246
Query: 319 HLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
++S + L S+++ I D ++ ++ + L SL
Sbjct: 247 YISEMKQLTSLDIGGNQIGDEEVKLISEMKQLTSL 281
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
+ +S + L S+N++ I + ++G+ L SLN+ I D G ++ + L +
Sbjct: 126 KFISEMKELTSLNINGNVIGAEGAKFISGMKQLTSLNISYNVIGDKGAKLISEMKQLISI 185
Query: 378 DLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGL 431
++ RI GA ++ K L SL I + D +G+ L SL++ N+RI G
Sbjct: 186 NISYNRICGEGAKFISEMKQLTSLNIANNSIGDTGAKFISGMKELTSLDIYNNRIGREGA 245
Query: 432 RHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFRP 471
+++ +K L SL + ++ ++K + ++ L S R
Sbjct: 246 KYISEMKQLTSLDIGGNQIGDEEVKLIS--EMKQLTSLRK 283
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 75/154 (48%)
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
+S + L LN+N + +G + S + L LN+ +N I D+ + + L S+N+
Sbjct: 128 ISEMKELTSLNINGNVIGAEGAKFISGMKQLTSLNISYNVIGDKGAKLISEMKQLISINI 187
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
I EG ++ + L L +++ +G +G + +SG+ L S+++ I +
Sbjct: 188 SYNRICGEGAKFISEMKQLTSLNIANNSIGDTGAKFISGMKELTSLDIYNNRIGREGAKY 247
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
++ + L SL++ QI D + ++ + LT L
Sbjct: 248 ISEMKQLTSLDIGGNQIGDEEVKLISEMKQLTSL 281
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 25/176 (14%)
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
+ +L SLNI N I K +SG+ L SL IS + + D G
Sbjct: 131 MKELTSLNIN-GNVIGAEGAKFISGMKQLTSLNISYNVIGDKG----------------- 172
Query: 214 CPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
A L +S + L +N++ ++ +G + S++ L LN+ N I D +
Sbjct: 173 -----AKL--ISEMKQLISINISYNRICGEGAKFISEMKQLTSLNIANNSIGDTGAKFIS 225
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
G+ L SL++ + IG EG ++ + L L++ Q+G ++ +S + L S+
Sbjct: 226 GMKELTSLDIYNNRIGREGAKYISEMKQLTSLDIGGNQIGDEEVKLISEMKQLTSL 281
>gi|291237888|ref|XP_002738864.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 871
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 146/326 (44%), Gaps = 42/326 (12%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSG-------LTNLKSLQISCSKVTDSGI-AYLKG 202
++ L +L+ LN+ C +TD + + L +L + + VTD G+ +YL+
Sbjct: 522 VEALKRLKHLNLSSCRQLTDKVLDTVKADNITLLVFKYLVTLSLEETSVTDRGMQSYLQS 581
Query: 203 -LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEK-FSKIGSLKVLNLG 260
L+ LNL VT A L +LSAL L L L ++S C K SK+ SL + +
Sbjct: 582 SPSTLSHLNLNKTSVTDATLQALSALTHLKSLGLEGTKISHLDCLKALSKLQSLNICSTN 641
Query: 261 FNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL--------------------- 299
I L L L++L N+D C GDE L L+GL
Sbjct: 642 LPAIALSHLKSLTSLSSLNISNID-CMNGDEALQCLSGLKLTHLKMPSRHTTTDVGLKYI 700
Query: 300 --CNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
L L+L+D ++ G+RHLS + +L S+ L T I+D ++ + GLS+L L LD
Sbjct: 701 SDMPLVVLDLTDYIRITDEGVRHLSNMRSLNSLFLVNTKITDDAMTHIQGLSNLVELCLD 760
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGARITDS-------GAAYLRNFKNLRSLEICGGGLT 409
+I++ G L L L L R+T + N NLR +I GL
Sbjct: 761 HTEISNKGATVLGFFNKLQVLGLASTRVTSKLLKSHVLNKLVMLNKLNLRDTKIRDNGLD 820
Query: 410 DAGLTGLVSLNVSNSRITSAGLRHLK 435
L L +N+ ++++ + HL+
Sbjct: 821 ALKLPHLTLINLDRTQVSPNAIEHLQ 846
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 138/280 (49%), Gaps = 24/280 (8%)
Query: 197 IAYLKGLQKLTLLNLEGC-PVTAACLDSLSA-------LGSLFYLNLNRCQLSDDGCEKF 248
+ ++ L++L LNL C +T LD++ A L L+L ++D G + +
Sbjct: 519 VMMVEALKRLKHLNLSSCRQLTDKVLDTVKADNITLLVFKYLVTLSLEETSVTDRGMQSY 578
Query: 249 --SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE 306
S +L LNL +TD L L LT+L+SL L+ I L L L L+ L
Sbjct: 579 LQSSPSTLSHLNLNKTSVTDATLQALSALTHLKSLGLEGTKISH--LDCLKALSKLQSLN 636
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDG--SLRKLAGLSSLKSLNLDARQIT-DT 363
+ T + + L HL LT+L S+N+S +G +L+ L+GL L L + +R T D
Sbjct: 637 ICSTNLPAIALSHLKSLTSLSSLNISNIDCMNGDEALQCLSGLK-LTHLKMPSRHTTTDV 695
Query: 364 GLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGL 416
GL ++ + L LDL RITD G +L N ++L SL + +TD GL+ L
Sbjct: 696 GLKYISDMP-LVVLDLTDYIRITDEGVRHLSNMRSLNSLFLVNTKITDDAMTHIQGLSNL 754
Query: 417 VSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIK 456
V L + ++ I++ G L L+ L L S +VT+ +K
Sbjct: 755 VELCLDHTEISNKGATVLGFFNKLQVLGLASTRVTSKLLK 794
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 145/325 (44%), Gaps = 46/325 (14%)
Query: 83 LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR-------RNNAITAQGMKAF--AGLINL 133
L+ L+ + C Q++D L+ ++ N+T L F+ ++T +GM+++ + L
Sbjct: 528 LKHLNLSSCRQLTDKVLDTVKA-DNITLLVFKYLVTLSLEETSVTDRGMQSYLQSSPSTL 586
Query: 134 VKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
L+L + + L L L L+SL ++ S + L L+ L+SL I + +
Sbjct: 587 SHLNLNKTSVTDATLQALSALTHLKSLGLEGTKI---SHLDCLKALSKLQSLNICSTNLP 643
Query: 194 --------------------------DSGIAYLKGLQKLTLLNLEGCPVTAAC-LDSLSA 226
D + L GL KLT L + T L +S
Sbjct: 644 AIALSHLKSLTSLSSLNISNIDCMNGDEALQCLSGL-KLTHLKMPSRHTTTDVGLKYISD 702
Query: 227 LGSLFYLNL-NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
+ L L+L + +++D+G S + SL L L +ITD+ + H++GL+NL L LD
Sbjct: 703 M-PLVVLDLTDYIRITDEGVRHLSNMRSLNSLFLVNTKITDDAMTHIQGLSNLVELCLDH 761
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH--LSGLTNLESINLSFTGISDGSLRK 343
I ++G L L+ L L+ T+V S L+ L+ L L +NL T I D L
Sbjct: 762 TEISNKGATVLGFFNKLQVLGLASTRVTSKLLKSHVLNKLVMLNKLNLRDTKIRDNGLDA 821
Query: 344 LAGLSSLKSLNLDARQITDTGLAAL 368
L L L +NLD Q++ + L
Sbjct: 822 LK-LPHLTLINLDRTQVSPNAIEHL 845
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 6/173 (3%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
TD GL ++ D L LD I+I+D G+ HL + +L SL F N IT M
Sbjct: 692 TTDVGLKYISDMP-LVVLDLTDYIRITDEGVRHLSNMRSLNSL-FLVNTKITDDAMTHIQ 749
Query: 129 GLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP--LSGLTNLKSLQ 186
GL NLV+L L+ + G L KL+ L + +T +K L+ L L L
Sbjct: 750 GLSNLVELCLDHTEISNKGATVLGFFNKLQVLGLA-STRVTSKLLKSHVLNKLVMLNKLN 808
Query: 187 ISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ 239
+ +K+ D+G+ LK L LTL+NL+ V+ ++ L L ++ + Q
Sbjct: 809 LRDTKIRDNGLDALK-LPHLTLINLDRTQVSPNAIEHLQGCPQLKFIRMKELQ 860
>gi|224091068|ref|XP_002309168.1| predicted protein [Populus trichocarpa]
gi|222855144|gb|EEE92691.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 188/438 (42%), Gaps = 71/438 (16%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSGSDVT-------------------------DSGLIHL 77
GV+D + +IA + + S+DLS +T D L L
Sbjct: 190 GVSDLGVGLIAVKCKEIRSLDLSYLPITNKCLPSILKLQYLEHIALEGCFGIDDDSLAAL 249
Query: 78 KD-CSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
K C +L++LD + C IS GL L G L L+ + +T + L L
Sbjct: 250 KHGCKSLKALDMSSCQNISHVGLSSLTSGAEGLQQLTLGYGSPVTLALANSLRSLSILQS 309
Query: 136 LDLERCTRIHGGLVNL-KGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQIS-CSKV 192
+ L+ C GL + + L L++ C +TD + L + +LK L I+ C K+
Sbjct: 310 VKLDGCPVTSAGLKAIGNWCISLSELSLSKCLGVTDEGLSSLVTKHKDLKKLDITCCRKI 369
Query: 193 TDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI 251
TD IAY+ LT L +E C + + F +CQ
Sbjct: 370 TDVSIAYITSSCTNLTSLRMESCTLVPS---------EAFVFIGQQCQF----------- 409
Query: 252 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDT 310
L+ L+L NEI D+ L + + L SL + C I D+GL ++ +KC +L+D
Sbjct: 410 --LEELDLTDNEIDDKGLKSISKCSKLSSLKIGICLNISDKGLSHI----GMKCSKLADL 463
Query: 311 QV-GSSGLRHL------SGLTNLESINLSF-TGISDGSLRKLAGLSSLKSL-NLDARQIT 361
+ S+G+ L G + LE IN+S+ I+D SL L+ S L + + IT
Sbjct: 464 DLYRSAGITDLGILAICRGCSGLEMINMSYCMDITDSSLLALSKCSRLNTFESRGCPLIT 523
Query: 362 DTGLAAL-TSLTGLTHLDLFGAR-ITDSGAAYLRNF-KNLRSLEICGGGLTDAGLTGLVS 418
+GLAA+ L LD+ I D+ L F +NLR + + +TD GL L S
Sbjct: 524 SSGLAAIAVGCKQLNKLDIKKCHNIGDAVMLQLARFSQNLRQITLSYSSVTDVGLLALAS 583
Query: 419 LNVSNSRITSAGLRHLKP 436
++ S +T L+ L P
Sbjct: 584 ISCLQS-MTVLHLKGLTP 600
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 223/511 (43%), Gaps = 103/511 (20%)
Query: 38 LGQYPGVN-----------DKWMDVIASQ-GSSLLSVDLSGS-DVTDSGLIHLK-DCSNL 83
L +YP VN + + VI++ SL S+DLS S + +GL+ L +C NL
Sbjct: 70 LNRYPNVNHLDLSLCLRLNNSSLTVISNICKDSLNSIDLSRSRSFSYNGLMSLALNCKNL 129
Query: 84 QSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA--------------- 128
S+D + ++ D + NL L R IT G+ A
Sbjct: 130 VSIDLSNATELRDAAAAAVAEAKNLERLWLVRCKLITDTGIGCIAVGCKKLRLISLKWCI 189
Query: 129 -------GLI-----NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
GLI + LDL + L ++ L LE + ++ C I D + L
Sbjct: 190 GVSDLGVGLIAVKCKEIRSLDLSYLPITNKCLPSILKLQYLEHIALEGCFGIDDDSLAAL 249
Query: 177 S-GLTNLKSLQI-SCSKVTDSGIAYL----KGLQKLTL---------------------- 208
G +LK+L + SC ++ G++ L +GLQ+LTL
Sbjct: 250 KHGCKSLKALDMSSCQNISHVGLSSLTSGAEGLQQLTLGYGSPVTLALANSLRSLSILQS 309
Query: 209 LNLEGCPVTAACLDSLSALG----SLFYLNLNRC-QLSDDGCEKF-SKIGSLKVLNLG-F 261
+ L+GCPVT+A L A+G SL L+L++C ++D+G +K LK L++
Sbjct: 310 VKLDGCPVTSA---GLKAIGNWCISLSELSLSKCLGVTDEGLSSLVTKHKDLKKLDITCC 366
Query: 262 NEITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLTGLCN-LKCLELSDTQVGSSGLR 318
+ITD + ++ TNL SL ++SC + E V + C L+ L+L+D ++ GL+
Sbjct: 367 RKITDVSIAYITSSCTNLTSLRMESCTLVPSEAFVFIGQQCQFLEELDLTDNEIDDKGLK 426
Query: 319 HLSGLTNLESINLSFT-GISDGSLRKLAGLSSLKSLNLDARQ---ITDTGLAALTS-LTG 373
+S + L S+ + ISD L + G+ K +LD + ITD G+ A+ +G
Sbjct: 427 SISKCSKLSSLKIGICLNISDKGLSHI-GMKCSKLADLDLYRSAGITDLGILAICRGCSG 485
Query: 374 LTHLDL-FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLR 432
L +++ + ITDS L L + E G L + +GL ++ V ++ ++
Sbjct: 486 LEMINMSYCMDITDSSLLALSKCSRLNTFESRGCPLITS--SGLAAIAVGCKQLNKLDIK 543
Query: 433 HLKPL------------KNLRSLTLESCKVT 451
+ +NLR +TL VT
Sbjct: 544 KCHNIGDAVMLQLARFSQNLRQITLSYSSVT 574
>gi|260788598|ref|XP_002589336.1| hypothetical protein BRAFLDRAFT_77788 [Branchiostoma floridae]
gi|229274513|gb|EEN45347.1| hypothetical protein BRAFLDRAFT_77788 [Branchiostoma floridae]
Length = 1470
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 130/264 (49%), Gaps = 25/264 (9%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYL-KGL---QKLTLLNLEGCPVTAACLDSLSALGSLF 231
+ L+ L+ + +S + ++D + L +GL QKL +NL ++ D L L SL
Sbjct: 1116 IQHLSLLEEIDLSHNVISDEAVPSLAEGLGSCQKLKKVNLSHNKLSGRG-DFLPPLPSLE 1174
Query: 232 YLNLNRCQLSDDGCEKFSK-IGS---LKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
++L+ +SD+ ++ +GS LK +NL N+++D L L NLE ++L
Sbjct: 1175 EIDLSYNAISDEAVPGLAEGLGSCQNLKKVNLSHNKLSDRGDF-LPPLPNLEEIDLSHNI 1233
Query: 288 IGDEGLVNLTGLC----NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
I DE + L G NLK ++LS ++ G L L NLE I+LS+ I D +
Sbjct: 1234 ISDEAVPGLAGSLGSCQNLKKVDLSHNKLSDRG-HFLPPLPNLEEIDLSYNAIGDEAEPG 1292
Query: 344 LA-GLSS---LKSLNLDARQITDTG--LAALTSLTGLTHLDLFGARITDSG----AAYLR 393
LA GL S LK +NL +++D G AA L LTH+D++ +D AA+L+
Sbjct: 1293 LAEGLGSCQKLKKVNLSHNKLSDVGELTAAFIDLPFLTHVDIYNNSFSDESLPTIAAWLK 1352
Query: 394 NFKNLRSLEICGGGLTDAGLTGLV 417
+ + + G + G+ V
Sbjct: 1353 VRTEVERVWMRGNRFSAEGVRDFV 1376
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 26/263 (9%)
Query: 173 MKPLSGLTNLKSLQISCSKVTDSG---IAYLKG----LQKLTLLNLEGCPVTAACLDSLS 225
+K L L NL+ L + S + G I+ L G L+KL L + + +
Sbjct: 1058 LKFLPQLPNLQELALCVSCQGEEGAEHISQLYGVRHVLKKLKLKDWSLDSIMRLSTQMIQ 1117
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSK-IGS---LKVLNLGFNEITDECLVHLKGLTNLESL 281
L L ++L+ +SD+ ++ +GS LK +NL N+++ L L +LE +
Sbjct: 1118 HLSLLEEIDLSHNVISDEAVPSLAEGLGSCQKLKKVNLSHNKLSGRGDF-LPPLPSLEEI 1176
Query: 282 NLDSCGIGDE---GLVNLTGLC-NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
+L I DE GL G C NLK + LS ++ G L L NLE I+LS IS
Sbjct: 1177 DLSYNAISDEAVPGLAEGLGSCQNLKKVNLSHNKLSDRG-DFLPPLPNLEEIDLSHNIIS 1235
Query: 338 DGSLRKLAG----LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG----A 389
D ++ LAG +LK ++L +++D G L L L +DL I D A
Sbjct: 1236 DEAVPGLAGSLGSCQNLKKVDLSHNKLSDRG-HFLPPLPNLEEIDLSYNAIGDEAEPGLA 1294
Query: 390 AYLRNFKNLRSLEICGGGLTDAG 412
L + + L+ + + L+D G
Sbjct: 1295 EGLGSCQKLKKVNLSHNKLSDVG 1317
>gi|46447089|ref|YP_008454.1| hypothetical protein pc1455 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400730|emb|CAF24179.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila
UWE25]
Length = 1866
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 191/435 (43%), Gaps = 88/435 (20%)
Query: 43 GVNDKWMDV-IASQG----SSLLSVDLSGSDVTDSGLIHLKDC----SNLQSLDFNFCIQ 93
G++DK M+V + + G ++L S L G+ ++D G + L+SL Q
Sbjct: 1351 GISDKEMEVEVIANGLACNTALKSFWLKGNQISDRGAEAFAQALASNTTLKSLYLG-GNQ 1409
Query: 94 ISDGGLEH----LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLV 149
ISD G+E L + L SLSF N I+ +GM+AFA
Sbjct: 1410 ISDKGMEAFAQALASNTTLESLSFNENQ-ISDKGMEAFAQA------------------- 1449
Query: 150 NLKGLMKLESLNIKWCNCITDSDM----KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
L LESL + N I+D M + L+ T LKSL + ++++D G+
Sbjct: 1450 -LASNTTLESLYLG-GNQISDKGMEAFAQALASNTTLKSLYLDDNQISDKGME------- 1500
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI----GSLKVLNLGF 261
A +L++ +L L+ N Q+SD G E F++ + K L LG
Sbjct: 1501 -------------AFAQALASNTTLKSLSFNENQISDKGMEAFAQALASNTTFKSLYLGG 1547
Query: 262 NEITD---ECLVH-LKGLTNLESLNLDSCGIGDEGLVNLTGLCN----LKCLELSDTQVG 313
N+I+D E L T L+SL LD I ++G L LK L ++ Q+
Sbjct: 1548 NQISDKGMEAFAQALASNTTLKSLYLDDNQISNKGAQALAQALASNTILKSLSFNENQIS 1607
Query: 314 SSGLRHLSGL----TNLESINLSFTGISDGSLRKLAGL----SSLKSLNLDARQITDTGL 365
G + L+ T L+S+ L + ISD + LA +LKSL L + QI+D G
Sbjct: 1608 DKGAQALAQALASNTTLKSLYLDDSQISDKGAQALAQALASNKALKSLCLGSNQISDKGA 1667
Query: 366 AALT----SLTGLTHLDLFGARITDSG----AAYLRNFKNLRSLEICGGGLTDAGLTGLV 417
AL S T L L L G +I+D G A L + L+SL + G ++D G+
Sbjct: 1668 QALAQALASNTTLKSLSLNGKQISDKGMEAIAQALASNTTLKSLSLNGKQISDKGMEAFA 1727
Query: 418 SLNVSNSRITSAGLR 432
SN+ + S LR
Sbjct: 1728 QTLASNTTLESLDLR 1742
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 202/466 (43%), Gaps = 106/466 (22%)
Query: 44 VNDKWMDVIA---SQGSSLLSVDLSGSDVTDSGLIHLKDC----SNLQSLDFNFCIQISD 96
++D+ + A + ++L S+ L G+ ++D G+ + L+SL FN QISD
Sbjct: 1382 ISDRGAEAFAQALASNTTLKSLYLGGNQISDKGMEAFAQALASNTTLESLSFNEN-QISD 1440
Query: 97 GGLEHL-RGLSNLTSLS--FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG 153
G+E + L++ T+L + N I+ +GM+AFA + LK
Sbjct: 1441 KGMEAFAQALASNTTLESLYLGGNQISDKGMEAFAQAL--------------ASNTTLKS 1486
Query: 154 LMKLESLNIKWCNCITDSDM----KPLSGLTNLKSLQISCSKVTDSGI-AYLKGLQKLTL 208
L L+ N I+D M + L+ T LKSL + ++++D G+ A+ + L T
Sbjct: 1487 LY-LDD------NQISDKGMEAFAQALASNTTLKSLSFNENQISDKGMEAFAQALASNTT 1539
Query: 209 LNL----------EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGS----L 254
+G A L S + L SL+ L+ Q+S+ G + ++ + L
Sbjct: 1540 FKSLYLGGNQISDKGMEAFAQALASNTTLKSLY---LDDNQISNKGAQALAQALASNTIL 1596
Query: 255 KVLNLGFNEITDECLVHLKGL----TNLESLNLDSCGIGDEGLVN----------LTGLC 300
K L+ N+I+D+ L T L+SL LD I D+G L LC
Sbjct: 1597 KSLSFNENQISDKGAQALAQALASNTTLKSLYLDDSQISDKGAQALAQALASNKALKSLC 1656
Query: 301 ----------------------NLKCLELSDTQVGSSGL----RHLSGLTNLESINLSFT 334
LK L L+ Q+ G+ + L+ T L+S++L+
Sbjct: 1657 LGSNQISDKGAQALAQALASNTTLKSLSLNGKQISDKGMEAIAQALASNTTLKSLSLNGK 1716
Query: 335 GISDGSL----RKLAGLSSLKSLNLDARQITDTGLAA----LTSLTGLTHLDLFGARITD 386
ISD + + LA ++L+SL+L QI+D G+ A L S T L LDL +I D
Sbjct: 1717 QISDKGMEAFAQTLASNTTLESLDLRNNQISDKGMQAFAQTLASNTTLESLDLRNNQIND 1776
Query: 387 SG----AAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITS 428
G A L + L+SL + G + D G+ + SN+ + S
Sbjct: 1777 KGMEAIAQALASNTALKSLYLDGNQINDKGMEAIAQALASNTALKS 1822
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 203/440 (46%), Gaps = 72/440 (16%)
Query: 11 FNELVYSRCLTEVSLEAF-----RDCALQDLCLGQYPGVNDKWMDVIA---SQGSSLLSV 62
FNE +++ +EAF + L+ L LG ++DK M+ A + ++L S+
Sbjct: 1433 FNE----NQISDKGMEAFAQALASNTTLESLYLGG-NQISDKGMEAFAQALASNTTLKSL 1487
Query: 63 DLSGSDVTDSGLIHLKDC----SNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLS--FRR 115
L + ++D G+ + L+SL FN QISD G+E + L++ T+ +
Sbjct: 1488 YLDDNQISDKGMEAFAQALASNTTLKSLSFNEN-QISDKGMEAFAQALASNTTFKSLYLG 1546
Query: 116 NNAITAQGMKAFAGLI----NLVKLDLERCTRIHGGLVNLKGLMK----LESLNIKWCNC 167
N I+ +GM+AFA + L L L+ + G L + L+SL+ N
Sbjct: 1547 GNQISDKGMEAFAQALASNTTLKSLYLDDNQISNKGAQALAQALASNTILKSLSFN-ENQ 1605
Query: 168 ITDSDMKPLSGL----TNLKSLQISCSKVTDSGIAYL-------KGLQKLTL----LNLE 212
I+D + L+ T LKSL + S+++D G L K L+ L L ++ +
Sbjct: 1606 ISDKGAQALAQALASNTTLKSLYLDDSQISDKGAQALAQALASNKALKSLCLGSNQISDK 1665
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI----GSLKVLNLGFNEITD-- 266
G A L S + L SL +LN Q+SD G E ++ +LK L+L +I+D
Sbjct: 1666 GAQALAQALASNTTLKSL---SLNGKQISDKGMEAIAQALASNTTLKSLSLNGKQISDKG 1722
Query: 267 -ECLVH-LKGLTNLESLNLDSCGIGDEGLV----NLTGLCNLKCLELSDTQVGSSGL--- 317
E L T LESL+L + I D+G+ L L+ L+L + Q+ G+
Sbjct: 1723 MEAFAQTLASNTTLESLDLRNNQISDKGMQAFAQTLASNTTLESLDLRNNQINDKGMEAI 1782
Query: 318 -RHLSGLTNLESINLSFTGISDGSL----RKLAGLSSLKSLNLDARQITDTGLAALT--- 369
+ L+ T L+S+ L I+D + + LA ++LKSL LD QI D G+ A+T
Sbjct: 1783 AQALASNTALKSLYLDGNQINDKGMEAIAQALASNTALKSLYLDGNQINDKGMEAITQAV 1842
Query: 370 -SLTGLTHLDLFGARITDSG 388
S T L L G I G
Sbjct: 1843 ASNTALKKFWLNGNLIKQEG 1862
>gi|290971703|ref|XP_002668623.1| predicted protein [Naegleria gruberi]
gi|284082100|gb|EFC35879.1| predicted protein [Naegleria gruberi]
Length = 295
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
+ L SLN+ GIGDE ++ + L L++S Q+G G ++LS + L S+++S
Sbjct: 131 MKQLISLNISGNGIGDEEAKFISEMKQLTSLDISANQIGDEGAKYLSEMKQLTSLDISAN 190
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
I D + L+ + L SLN+ +I D G ++ + LT LD+ ++ G ++
Sbjct: 191 LIGDEGAKYLSEMKQLISLNIGKNEI-DEGAKYISEMKQLTSLDISYTQVDVEGVKFISE 249
Query: 395 FKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHL 434
+ L SL ICG + G + L SL++S +RI G + +
Sbjct: 250 MRQLTSLNICGNRIGIEGVKFISEVKQLKSLDISYNRIGVEGAKFI 295
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 83/155 (53%), Gaps = 1/155 (0%)
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
S++ L LN+ N I DE + + L SL++ + IGDEG L+ + L L++S
Sbjct: 129 SEMKQLISLNISGNGIGDEEAKFISEMKQLTSLDISANQIGDEGAKYLSEMKQLTSLDIS 188
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
+G G ++LS + L S+N+ I +G+ + ++ + L SL++ Q+ G+ +
Sbjct: 189 ANLIGDEGAKYLSEMKQLISLNIGKNEIDEGA-KYISEMKQLTSLDISYTQVDVEGVKFI 247
Query: 369 TSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
+ + LT L++ G RI G ++ K L+SL+I
Sbjct: 248 SEMRQLTSLNICGNRIGIEGVKFISEVKQLKSLDI 282
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
+ +S + L S+N+S GI D + ++ + L SL++ A QI D G L+ + LT L
Sbjct: 126 KFISEMKQLISLNISGNGIGDEEAKFISEMKQLTSLDISANQIGDEGAKYLSEMKQLTSL 185
Query: 378 DLFGARITDSGAAYLRNFKNLRSL-----EICGGGLTDAGLTGLVSLNVSNSRITSAGLR 432
D+ I D GA YL K L SL EI G + + L SL++S +++ G++
Sbjct: 186 DISANLIGDEGAKYLSEMKQLISLNIGKNEIDEGAKYISEMKQLTSLDISYTQVDVEGVK 245
Query: 433 HLKPLKNLRSLT-------LESCKVTANDIKRLQSRDLP 464
+ ++ L SL +E K + ++K+L+S D+
Sbjct: 246 FISEMRQLTSLNICGNRIGIEGVKFIS-EVKQLKSLDIS 283
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
+S + L LN++ + D+ + S++ L L++ N+I DE +L + L SL++
Sbjct: 128 ISEMKQLISLNISGNGIGDEEAKFISEMKQLTSLDISANQIGDEGAKYLSEMKQLTSLDI 187
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
+ IGDEG L+ + L L + ++ G +++S + L S+++S+T + ++
Sbjct: 188 SANLIGDEGAKYLSEMKQLISLNIGKNEI-DEGAKYISEMKQLTSLDISYTQVDVEGVKF 246
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
++ + L SLN+ +I G+ ++ + L LD+ RI GA ++
Sbjct: 247 ISEMRQLTSLNICGNRIGIEGVKFISEVKQLKSLDISYNRIGVEGAKFI 295
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 94/179 (52%), Gaps = 3/179 (1%)
Query: 160 LNIKWCNCITDS--DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
+N+ + + + DS + K +S + L SL IS + + D ++ +++LT L++ +
Sbjct: 110 VNVTYSDWLLDSFEEAKFISEMKQLISLNISGNGIGDEEAKFISEMKQLTSLDISANQIG 169
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 277
LS + L L+++ + D+G + S++ L LN+G NEI DE ++ +
Sbjct: 170 DEGAKYLSEMKQLTSLDISANLIGDEGAKYLSEMKQLISLNIGKNEI-DEGAKYISEMKQ 228
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
L SL++ + EG+ ++ + L L + ++G G++ +S + L+S+++S+ I
Sbjct: 229 LTSLDISYTQVDVEGVKFISEMRQLTSLNICGNRIGIEGVKFISEVKQLKSLDISYNRI 287
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 43 GVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
G+ D+ I S+ L S+D+S + + D G +L + L SLD + + I D G ++L
Sbjct: 143 GIGDEEAKFI-SEMKQLTSLDISANQIGDEGAKYLSEMKQLTSLDISANL-IGDEGAKYL 200
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI 162
+ L SL+ +N +G K + + L LD+ G+ + + +L SLNI
Sbjct: 201 SEMKQLISLNIGKNE--IDEGAKYISEMKQLTSLDISYTQVDVEGVKFISEMRQLTSLNI 258
Query: 163 KWC-NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYL 200
C N I +K +S + LKSL IS +++ G ++
Sbjct: 259 --CGNRIGIEGVKFISEVKQLKSLDISYNRIGVEGAKFI 295
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 4/158 (2%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ L+S+++SG+ + D + + L SLD + QI D G ++L + LTSL
Sbjct: 129 SEMKQLISLNISGNGIGDEEAKFISEMKQLTSLDIS-ANQIGDEGAKYLSEMKQLTSLDI 187
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
N I +G K + + L+ L++ + I G + + +L SL+I + + +
Sbjct: 188 SA-NLIGDEGAKYLSEMKQLISLNIGK-NEIDEGAKYISEMKQLTSLDISYTQVDVEG-V 244
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
K +S + L SL I +++ G+ ++ +++L L++
Sbjct: 245 KFISEMRQLTSLNICGNRIGIEGVKFISEVKQLKSLDI 282
>gi|449463292|ref|XP_004149368.1| PREDICTED: F-box/LRR-repeat protein 3-like [Cucumis sativus]
Length = 663
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 198/416 (47%), Gaps = 34/416 (8%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI 92
L+ LCL + D + +IA++ L S+DLS +T+ L + +L+ L C
Sbjct: 187 LKLLCLNWCLHITDLGVGLIATKCKELRSLDLSFLPITEKCLPTILQLQHLEELILEECH 246
Query: 93 QISDGGLEHLRGLSNLTSLSF---RRNNAITAQGMKA-FAGLINLVKLDLER------CT 142
I D GLE L+ SL F R +I+ G+ + G NL KL+L T
Sbjct: 247 GIDDEGLEALKRNCKRNSLKFLNLSRCPSISHSGLSSLIIGSENLQKLNLSYGSSVSITT 306
Query: 143 RIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGL-TNLKSLQIS-CSKVTDSGIAYL 200
+ L N G L+S+ + C+ +T S +K ++ +LK L +S C+ VTD ++ L
Sbjct: 307 DMAKCLHNFSG---LQSIKLDCCS-LTTSGVKTIANWRASLKELSLSKCAGVTDECLSIL 362
Query: 201 -KGLQKLTLLNLEGC-PVTAACLDSL-SALGSLFYLNLNRCQLSDDGCEKFSKIGS---- 253
+ ++L L++ C +T ++S+ S+ L L + C L E + IG
Sbjct: 363 VQKHKQLRKLDITCCRKITYGSINSITSSCSFLVSLKMESCSLVPR--EAYVLIGQRCPY 420
Query: 254 LKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLC-NLKCLEL-SDT 310
L+ L+L NEI +E L + + L L L C I D+GL ++ C +K L+L T
Sbjct: 421 LEELDLTDNEIDNEGLKSISKCSRLSVLKLGICLNINDDGLCHIASGCPKIKELDLYRST 480
Query: 311 QVGSSGLRHLS-GLTNLESINLSFT-GISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAA 367
+ G+ + G LE IN+++ I+D SL L+ +LK+L + I+ GL+A
Sbjct: 481 GITDRGIAATAGGCPALEMINIAYNDKITDSSLISLSKCLNLKALEIRGCCCISSIGLSA 540
Query: 368 LT-SLTGLTHLDLFG-ARITDSGAAYLRNF-KNLRSLEICGGGLTDAGLTGLVSLN 420
+ LT LD+ + D G L F NL+ + + +TD GL L S+N
Sbjct: 541 IAMGCKQLTVLDIKKCVNVNDDGMLPLAQFSHNLKQINLSYCSVTDVGLLSLASIN 596
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 177/399 (44%), Gaps = 57/399 (14%)
Query: 59 LLSVDLS-GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR-GLSNLTSLSFRRN 116
L+ ++LS G +TDS + L + NL+ L + C I+D G+ + G L L
Sbjct: 136 LVEINLSNGVALTDSVIKVLAEAKNLEKLWLSRCKSITDMGIGCVAVGCKKLKLLCLNWC 195
Query: 117 NAITAQGMKAFAGLIN-LVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
IT G+ A L LDL L + L LE L ++ C+ I D ++
Sbjct: 196 LHITDLGVGLIATKCKELRSLDLSFLPITEKCLPTILQLQHLEELILEECHGIDDEGLEA 255
Query: 176 LS---GLTNLKSLQIS-CSKVTDSGIAYL----KGLQKLTLLNLEGCPVT---AACLDSL 224
L +LK L +S C ++ SG++ L + LQKL L +T A CL +
Sbjct: 256 LKRNCKRNSLKFLNLSRCPSISHSGLSSLIIGSENLQKLNLSYGSSVSITTDMAKCLHNF 315
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKI-GSLKVLNLGFNE-ITDECLVHL----KGLTNL 278
S L S + L+ C L+ G + + SLK L+L +TDECL L K L L
Sbjct: 316 SGLQS---IKLDCCSLTTSGVKTIANWRASLKELSLSKCAGVTDECLSILVQKHKQLRKL 372
Query: 279 E-----------------------SLNLDSCG-IGDEGLVNLTGLCN-LKCLELSDTQVG 313
+ SL ++SC + E V + C L+ L+L+D ++
Sbjct: 373 DITCCRKITYGSINSITSSCSFLVSLKMESCSLVPREAYVLIGQRCPYLEELDLTDNEID 432
Query: 314 SSGLRHLSGLTNLESINLSFT-GISDGSLRKLA-GLSSLKSLNL-DARQITDTGLAALTS 370
+ GL+ +S + L + L I+D L +A G +K L+L + ITD G+AA
Sbjct: 433 NEGLKSISKCSRLSVLKLGICLNINDDGLCHIASGCPKIKELDLYRSTGITDRGIAATAG 492
Query: 371 LTGLTHLDL----FGARITDSGAAYLRNFKNLRSLEICG 405
G L++ + +ITDS L NL++LEI G
Sbjct: 493 --GCPALEMINIAYNDKITDSSLISLSKCLNLKALEIRG 529
>gi|325108768|ref|YP_004269836.1| hypothetical protein Plabr_2212 [Planctomyces brasiliensis DSM
5305]
gi|324969036|gb|ADY59814.1| hypothetical protein Plabr_2212 [Planctomyces brasiliensis DSM
5305]
Length = 268
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 64/113 (56%)
Query: 256 VLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSS 315
+L EI+D+ + + LT + +NL I D GL +L+GL +L L L T + +
Sbjct: 49 TFHLAEGEISDKSIQPVSELTQVYLVNLRGTAITDAGLAHLSGLDSLSRLHLEKTGITDA 108
Query: 316 GLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
GL+HL+GL LE +NL T ISD L++LA L LK L + Q+T G+ L
Sbjct: 109 GLKHLTGLNKLEYLNLYDTKISDAGLQQLAALKGLKKLYVWQTQVTWDGVKKL 161
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 64/115 (55%)
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
+ +L I D+ + ++ L + + L T + +GL HLSGL +L ++L TGI+D
Sbjct: 49 TFHLAEGEISDKSIQPVSELTQVYLVNLRGTAITDAGLAHLSGLDSLSRLHLEKTGITDA 108
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
L+ L GL+ L+ LNL +I+D GL L +L GL L ++ ++T G L+
Sbjct: 109 GLKHLTGLNKLEYLNLYDTKISDAGLQQLAALKGLKKLYVWQTQVTWDGVKKLQE 163
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%)
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
L++ ++ ++ +S LT + +NL T I+D L L+GL SL L+L+ ITD
Sbjct: 49 TFHLAEGEISDKSIQPVSELTQVYLVNLRGTAITDAGLAHLSGLDSLSRLHLEKTGITDA 108
Query: 364 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGL 416
GL LT L L +L+L+ +I+D+G L K L+ L + +T G+ L
Sbjct: 109 GLKHLTGLNKLEYLNLYDTKISDAGLQQLAALKGLKKLYVWQTQVTWDGVKKL 161
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 59/98 (60%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
I+D ++P+S LT + + + + +TD+G+A+L GL L+ L+LE +T A L L+ L
Sbjct: 57 ISDKSIQPVSELTQVYLVNLRGTAITDAGLAHLSGLDSLSRLHLEKTGITDAGLKHLTGL 116
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
L YLNL ++SD G ++ + + LK L + ++T
Sbjct: 117 NKLEYLNLYDTKISDAGLQQLAALKGLKKLYVWQTQVT 154
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 30/167 (17%)
Query: 310 TQVGSSGLRHLSGLTNLESINLSFT----GISDGSLRKLAGLSSLKSLNLDARQITDTGL 365
++V ++G R + N + + ++F ISD S++ ++ L+ + +NL ITD GL
Sbjct: 27 SKVEANGGRVMKLAQNDDRLEVTFHLAEGEISDKSIQPVSELTQVYLVNLRGTAITDAGL 86
Query: 366 AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSR 425
A L+ L L+ L L ITD+G +L GL L LN+ +++
Sbjct: 87 AHLSGLDSLSRLHLEKTGITDAGLKHL------------------TGLNKLEYLNLYDTK 128
Query: 426 ITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFRPE 472
I+ AGL+ L LK L+ L + +VT + +K+LQ + RPE
Sbjct: 129 ISDAGLQQLAALKGLKKLYVWQTQVTWDGVKKLQEQ--------RPE 167
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 60/137 (43%), Gaps = 24/137 (17%)
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
+ ++ +++D I + L ++ L+NL G +T A L LS L SL L+L +
Sbjct: 49 TFHLAEGEISDKSIQPVSELTQVYLVNLRGTAITDAGLAHLSGLDSLSRLHLEKTG---- 104
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
ITD L HL GL LE LNL I D GL L L LK
Sbjct: 105 --------------------ITDAGLKHLTGLNKLEYLNLYDTKISDAGLQQLAALKGLK 144
Query: 304 CLELSDTQVGSSGLRHL 320
L + TQV G++ L
Sbjct: 145 KLYVWQTQVTWDGVKKL 161
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
LVNL+G ITD+ + LSGL +L L + + +TD+G+ +L GL KL
Sbjct: 73 LVNLRG------------TAITDAGLAHLSGLDSLSRLHLEKTGITDAGLKHLTGLNKLE 120
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
LNL ++ A L L+AL L L + + Q++ DG +K +
Sbjct: 121 YLNLYDTKISDAGLQQLAALKGLKKLYVWQTQVTWDGVKKLQE 163
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 12/154 (7%)
Query: 51 VIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI---QISDGGLEHLRGLSN 107
++ +Q +++ V+ +G V +K N L+ F + +ISD ++ + L+
Sbjct: 18 LLPAQQAAVSKVEANGGRV-------MKLAQNDDRLEVTFHLAEGEISDKSIQPVSELTQ 70
Query: 108 LTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNC 167
+ ++ R AIT G+ +GL +L +L LE+ GL +L GL KLE LN+ +
Sbjct: 71 VYLVNLR-GTAITDAGLAHLSGLDSLSRLHLEKTGITDAGLKHLTGLNKLEYLNL-YDTK 128
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLK 201
I+D+ ++ L+ L LK L + ++VT G+ L+
Sbjct: 129 ISDAGLQQLAALKGLKKLYVWQTQVTWDGVKKLQ 162
>gi|290980528|ref|XP_002672984.1| FBOX domain-containing protein [Naegleria gruberi]
gi|284086564|gb|EFC40240.1| FBOX domain-containing protein [Naegleria gruberi]
Length = 390
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 120/268 (44%), Gaps = 39/268 (14%)
Query: 168 ITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
++D + +S L LK L+I + +Y+ +Q L L L+ L +L+ L
Sbjct: 127 LSDDNSYYVSKLKGLKRLEIDHCVLEPKVFSYISQIQSLKELQLDKNYYNGE-LKNLTRL 185
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD---ECLVHLKGLT-------- 276
L L L C+L + GSL LNL N+I + EC+ +++ LT
Sbjct: 186 KHLKLLELVNCELELKDINLLLEFGSLSHLNLELNKIGNLHAECISNMRTLTFLGLNNTN 245
Query: 277 ----NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS 332
+LE L L I EG+ L + LK L L+D +G G +S LTNL +NL+
Sbjct: 246 ITILSLEVLYLGFNEIDAEGVEYLVKMKTLKTLILNDNPIGQLGAVLISKLTNLRELNLT 305
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
T ++D + ++ ++SL+ L + G H+ IT GA YL
Sbjct: 306 NTCMNDKGVEYISKMASLRDLQI-----------------GTNHM------ITKLGALYL 342
Query: 393 RNFKNLRSLEICGGGLTDAGLTGLVSLN 420
KNL+ L + + D G+ LV+L+
Sbjct: 343 SQMKNLQRLSVPATSINDQGVEFLVNLD 370
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 148/331 (44%), Gaps = 44/331 (13%)
Query: 90 FCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT---RIHG 146
FC +I G +E NL L +++ ++ + L L +L+++ C ++
Sbjct: 100 FC-EIGLGVMECFPYFENLQVLKLKKS-LLSDDNSYYVSKLKGLKRLEIDHCVLEPKVFS 157
Query: 147 GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKL 206
+ ++ L +L+ L+ + N ++K L+ L +LK L++ ++ I L L
Sbjct: 158 YISQIQSLKELQ-LDKNYYN----GELKNLTRLKHLKLLELVNCELELKDINLLLEFGSL 212
Query: 207 TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
+ LNLE + + +S + +L +L LN ++ I SL+VL LGFNE
Sbjct: 213 SHLNLELNKIGNLHAECISNMRTLTFLGLNNTNIT---------ILSLEVLYLGFNE--- 260
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
I EG+ L + LK L L+D +G G +S LTNL
Sbjct: 261 ---------------------IDAEGVEYLVKMKTLKTLILNDNPIGQLGAVLISKLTNL 299
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ-ITDTGLAALTSLTGLTHLDLFGARIT 385
+NL+ T ++D + ++ ++SL+ L + IT G L+ + L L + I
Sbjct: 300 RELNLTNTCMNDKGVEYISKMASLRDLQIGTNHMITKLGALYLSQMKNLQRLSVPATSIN 359
Query: 386 DSGAAYLRNFKNLRSLEICGGGLTDAGLTGL 416
D G +L N +L+ L+ G L+ GL L
Sbjct: 360 DQGVEFLVNLDSLQYLDARGLPLSIRGLETL 390
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 116/290 (40%), Gaps = 57/290 (19%)
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH 271
E C + ++ +L L L + LSDD SK+ LK L + + + +
Sbjct: 99 EFCEIGLGVMECFPYFENLQVLKLKKSLLSDDNSYYVSKLKGLKRLEIDHCVLEPKVFSY 158
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQV-----------GS------ 314
+ + +L+ L LD E L NLT L +LK LEL + ++ GS
Sbjct: 159 ISQIQSLKELQLDKNYYNGE-LKNLTRLKHLKLLELVNCELELKDINLLLEFGSLSHLNL 217
Query: 315 -------------SGLRHLS--GLTN-------LESINLSFTGISDGSLRKLAGLSSLKS 352
S +R L+ GL N LE + L F I + L + +LK+
Sbjct: 218 ELNKIGNLHAECISNMRTLTFLGLNNTNITILSLEVLYLGFNEIDAEGVEYLVKMKTLKT 277
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
L L+ I G ++ LT L L+L + D G Y+ +LR L+I
Sbjct: 278 LILNDNPIGQLGAVLISKLTNLRELNLTNTCMNDKGVEYISKMASLRDLQIG-------- 329
Query: 413 LTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRD 462
+N IT G +L +KNL+ L++ + + ++ L + D
Sbjct: 330 ---------TNHMITKLGALYLSQMKNLQRLSVPATSINDQGVEFLVNLD 370
>gi|87311421|ref|ZP_01093541.1| hypothetical protein DSM3645_25297 [Blastopirellula marina DSM
3645]
gi|87285833|gb|EAQ77747.1| hypothetical protein DSM3645_25297 [Blastopirellula marina DSM
3645]
Length = 192
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
+E+SD V + L+ LS T L+ I L T ++D + L L L+ +NL ITD
Sbjct: 35 SIEVSDRTVSPAELQLLSRATQLQRIRLDQTPLADPAAAVLGALPELQFVNLPQADITDA 94
Query: 364 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLN--- 420
GLA + L LT L + +TD+G A LR+ +LR L + LTDA L + +N
Sbjct: 95 GLAEIAKLPQLTQLRIGSPHLTDAGIAALRDNPSLRFLHLLQTPLTDAALEHIAEINSLE 154
Query: 421 ---VSNSRITSAGLRHL 434
+ + IT GL L
Sbjct: 155 SFYLDQTNITEPGLAKL 171
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 1/148 (0%)
Query: 150 NLKGLMKLESLNIKWCN-CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTL 208
L+ ++ ES +I+ + ++ ++++ LS T L+ +++ + + D A L L +L
Sbjct: 24 QLRQVIAGESDSIEVSDRTVSPAELQLLSRATQLQRIRLDQTPLADPAAAVLGALPELQF 83
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
+NL +T A L ++ L L L + L+D G SL+ L+L +TD
Sbjct: 84 VNLPQADITDAGLAEIAKLPQLTQLRIGSPHLTDAGIAALRDNPSLRFLHLLQTPLTDAA 143
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNL 296
L H+ + +LES LD I + GL L
Sbjct: 144 LEHIAEINSLESFYLDQTNITEPGLAKL 171
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%)
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
V+ A L LS L + L++ L+D + L+ +NL +ITD L + L
Sbjct: 43 VSPAELQLLSRATQLQRIRLDQTPLADPAAAVLGALPELQFVNLPQADITDAGLAEIAKL 102
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTG 335
L L + S + D G+ L +L+ L L T + + L H++ + +LES L T
Sbjct: 103 PQLTQLRIGSPHLTDAGIAALRDNPSLRFLHLLQTPLTDAALEHIAEINSLESFYLDQTN 162
Query: 336 ISDGSLRKL 344
I++ L KL
Sbjct: 163 ITEPGLAKL 171
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%)
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL 307
S+ L+ + L + D L L L+ +NL I D GL + L L L +
Sbjct: 51 LSRATQLQRIRLDQTPLADPAAAVLGALPELQFVNLPQADITDAGLAEIAKLPQLTQLRI 110
Query: 308 SDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAA 367
+ +G+ L +L ++L T ++D +L +A ++SL+S LD IT+ GLA
Sbjct: 111 GSPHLTDAGIAALRDNPSLRFLHLLQTPLTDAALEHIAEINSLESFYLDQTNITEPGLAK 170
Query: 368 LTSLTGLTHL 377
L H+
Sbjct: 171 LIERRPQLHV 180
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L+ L+ + L T + L L L+ +NL I+D L ++A L L L +
Sbjct: 51 LSRATQLQRIRLDQTPLADPAAAVLGALPELQFVNLPQADITDAGLAEIAKLPQLTQLRI 110
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG 415
+ +TD G+AAL L L L +TD+ ++ +L S + +T+ GL
Sbjct: 111 GSPHLTDAGIAALRDNPSLRFLHLLQTPLTDAALEHIAEINSLESFYLDQTNITEPGLAK 170
Query: 416 LVS 418
L+
Sbjct: 171 LIE 173
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%)
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
S+++S V+ + + L +L + L+ P+ L AL L ++NL + ++D
Sbjct: 35 SIEVSDRTVSPAELQLLSRATQLQRIRLDQTPLADPAAAVLGALPELQFVNLPQADITDA 94
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
G + +K+ L L +G +TD + L+ +L L+L + D L ++ + +L+
Sbjct: 95 GLAEIAKLPQLTQLRIGSPHLTDAGIAALRDNPSLRFLHLLQTPLTDAALEHIAEINSLE 154
Query: 304 CLELSDTQVGSSGLRHL 320
L T + GL L
Sbjct: 155 SFYLDQTNITEPGLAKL 171
>gi|224123030|ref|XP_002318976.1| predicted protein [Populus trichocarpa]
gi|222857352|gb|EEE94899.1| predicted protein [Populus trichocarpa]
Length = 646
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 198/451 (43%), Gaps = 86/451 (19%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD-VTDSGLIHLKDCSN-LQSLDFNF 90
L+DL + P VND + + + L +D+S D V+ GL L N L +D +
Sbjct: 228 LEDLAMVGCPLVNDVGLQFLENGCPLLQKIDVSRCDCVSSYGLSALIRGHNGLLQIDAGY 287
Query: 91 CI-QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMK----AFAGLIN----LVKLDLERC 141
I + S +E ++ L NL NAI G + F + N L+++ L +C
Sbjct: 288 TISEFSANFVECMQELKNL--------NAIIIDGARVSDTVFQTISNNCRSLIEIGLSKC 339
Query: 142 TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK-VTDSGI-AY 199
T G+ N++ M+ +SG NLK++ ++C + +TD+ I A
Sbjct: 340 T----GVTNMR-------------------IMQLVSGCVNLKTINLTCCRSITDAAISAI 376
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGS----LFYLNLNRC-QLSDDGCEKFSKIGSL 254
+ L L LE C + SL LGS L L+L C ++D G E+ S+ L
Sbjct: 377 ADSCRNLLCLKLESCNMITE--KSLEQLGSHCALLEDLDLTDCFGINDRGLERLSRCSRL 434
Query: 255 KVLNLGF-NEITDECLVHLKG-LTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQ 311
L LG I+D L ++ + L L+L C GIGD+GL L+
Sbjct: 435 LCLKLGLCTNISDTGLFYIASNCSQLHELDLYRCMGIGDDGLAALS-------------- 480
Query: 312 VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAAL- 368
SG L +NLS+ ++D + L L L L L A +IT GL AL
Sbjct: 481 ---------SGCKKLRKLNLSYCIEVTDKGMESLGYLEVLSDLELRALDKITGVGLTALV 531
Query: 369 TSLTGLTHLDL-FGARITDSGAAYLRNF-KNLRSLEICGGGLTDAGLTGLVSLNVSNSRI 426
T LT+LDL ++ D+G L + +NLR + + +TD L +V N+ +R+
Sbjct: 532 TRCKRLTYLDLKHCKKVDDTGFWALAYYSRNLRQINLSYCSITDMALC-MVMGNL--TRL 588
Query: 427 TSAGLRHLKPLK-NLRSLTLESCKVTANDIK 456
A L HL+ + L L +C V +K
Sbjct: 589 QDADLVHLRNVTVEGFDLALRACCVRIKKVK 619
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 130/541 (24%), Positives = 199/541 (36%), Gaps = 146/541 (26%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGL-------EHLRGLSNLTSLSFRRNNAITAQGMK---- 125
LK+ +NL +LD + C I DG + +H NL L+ RR N + G++
Sbjct: 63 LKNYTNLLTLDLSVCPCIEDGTITLLLHRVDHSMWARNLKFLNLRRANGLKFAGLEMLVG 122
Query: 126 ----------------------AFAGLINLVKLDLERCTRIHG-GLVNLK-GLMKLESLN 161
A +G L +L +++C + GL + G +L L+
Sbjct: 123 ACKGLESVDVSYCRGFGDREAAAISGCGGLKELSMDKCLGVSDVGLAKIVVGCGRLVRLS 182
Query: 162 IKWCNCITDSDMKPL-SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP----- 215
+KWC I+D ++ L LK L +S KVT + + L KL L + GCP
Sbjct: 183 LKWCMEISDLGVELLCKKCLELKFLDVSYLKVTSDSLRSIAALPKLEDLAMVGCPLVNDV 242
Query: 216 --------------VTAACLDSLSALG--------------------SLFYLNLNRCQLS 241
+ + D +S+ G S F N C
Sbjct: 243 GLQFLENGCPLLQKIDVSRCDCVSSYGLSALIRGHNGLLQIDAGYTISEFSANFVECMQE 302
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDEC-------LVHLKGLTNL------------ESLN 282
G+ +V + F I++ C L G+TN+ +++N
Sbjct: 303 LKNLNAIIIDGA-RVSDTVFQTISNNCRSLIEIGLSKCTGVTNMRIMQLVSGCVNLKTIN 361
Query: 283 LDSC-GIGDEGLVNLTGLC-NLKCLEL-SDTQVGSSGLRHL-SGLTNLESINLS-FTGIS 337
L C I D + + C NL CL+L S + L L S LE ++L+ GI+
Sbjct: 362 LTCCRSITDAAISAIADSCRNLLCLKLESCNMITEKSLEQLGSHCALLEDLDLTDCFGIN 421
Query: 338 DGSLRKLAGLSSLKSLNLD-ARQITDTGLAALTS-LTGLTHLDLF--------GARITDS 387
D L +L+ S L L L I+DTGL + S + L LDL+ G S
Sbjct: 422 DRGLERLSRCSRLLCLKLGLCTNISDTGLFYIASNCSQLHELDLYRCMGIGDDGLAALSS 481
Query: 388 GAAYLRNFKNLRSLEICGGGLTDAGL-----------------TGLVSLNVSNSRITSAG 430
G LR +E+ G+ G GL +L R+T
Sbjct: 482 GCKKLRKLNLSYCIEVTDKGMESLGYLEVLSDLELRALDKITGVGLTALVTRCKRLTYLD 541
Query: 431 LRHLKPL------------KNLRSLTLESCKVT-------ANDIKRLQSRDLPNLVSFRP 471
L+H K + +NLR + L C +T ++ RLQ DL +L +
Sbjct: 542 LKHCKKVDDTGFWALAYYSRNLRQINLSYCSITDMALCMVMGNLTRLQDADLVHLRNVTV 601
Query: 472 E 472
E
Sbjct: 602 E 602
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 38 LGQYPGVNDKWMDVIASQGSSLLSVDLSGS-DVTDSGLIHLKD-CSNLQSLDFNFCIQIS 95
LG ++D + IAS S L +DL + D GL L C L+ L+ ++CI+++
Sbjct: 439 LGLCTNISDTGLFYIASNCSQLHELDLYRCMGIGDDGLAALSSGCKKLRKLNLSYCIEVT 498
Query: 96 DGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-LVKLDLERCTRIHG-GLVNLKG 153
D G+E L L L+ L R + IT G+ A L LDL+ C ++ G L
Sbjct: 499 DKGMESLGYLEVLSDLELRALDKITGVGLTALVTRCKRLTYLDLKHCKKVDDTGFWALAY 558
Query: 154 LMK-LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTL-LNL 211
+ L +N+ +C+ ITD + + G NL LQ D+ + +L+ + L L
Sbjct: 559 YSRNLRQINLSYCS-ITDMALCMVMG--NLTRLQ-------DADLVHLRNVTVEGFDLAL 608
Query: 212 EGCPVTAACLDSLSALGSLF 231
C V + ++ALG L
Sbjct: 609 RACCVRIKKVKLVAALGFLL 628
>gi|397563975|gb|EJK44014.1| hypothetical protein THAOC_37488 [Thalassiosira oceanica]
Length = 1585
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 142/460 (30%), Positives = 217/460 (47%), Gaps = 80/460 (17%)
Query: 38 LGQYPGV-NDKWMDVIASQGSSLLSVDLSGSD-VTDSGLIHLKDCSNLQSLDFNFCIQIS 95
L Q+ V D+ + I+ ++ ++LSG+D VTD G+ L CS LQ L+ + ++
Sbjct: 585 LSQWSLVATDECIHTISCHNHDIIHLNLSGADAVTDEGIQSLSKCSQLQELNLDNIFRLQ 644
Query: 96 DGGLEHLRGLSNLTSL--SFRRNNAITAQGMKA--FAGL----INLVKLDLERCTRIHGG 147
G LS +T + R + G+KA FA L LV L L C +I
Sbjct: 645 TG-------LSLVTERCCAIRDLSLCGCLGLKAPQFASLGQNARGLVSLKLSGCRQITPW 697
Query: 148 LVN--LKGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQI-SCSKVTDSGIAYL-KG 202
+GL LE L+I +C+ +TD ++K LS T L+ L + C V+D G+ +L +G
Sbjct: 698 AFTKLFEGLKLLEILDISYCSLVTDQEIKLLSESATGLRCLNLRECKLVSDIGLTFLSQG 757
Query: 203 LQKLTLLNLEGCPVTAACLD-SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL-G 260
+L LNL + D +L +G GC SL+ LNL G
Sbjct: 758 CTELVDLNLRRSELPFRVTDVALLQIG--------------QGCR------SLRALNLHG 797
Query: 261 FNEITDECLVHLKGLT-NLESLNLDSC-GIGDEGLVNLTGLC-NLKCLELSDTQ-VGSSG 316
I+D L L L +NL +C I + G +L C NL L++ + V G
Sbjct: 798 CELISDTGLSWLASWAKQLRHVNLANCTKITNAGARHLGDGCPNLISAVLTNVKRVSDVG 857
Query: 317 LRHLS-GLTNLESINLS-FTGISDGSLRKLAGLSSLKSL----------NLDARQ---IT 361
LR L+ G + LE++N S +SDG R+ GL L++L NL+ R I+
Sbjct: 858 LRCLANGCSKLETLNCSGLAMLSDGVDREF-GLEGLQALGASSCSTTLKNLNIRGCTLIS 916
Query: 362 DTGLAALTSLTGLTHLDLFG-ARITDSGAAYL----RNFKNLRSLEICG----GGLTDAG 412
+ A++ L LDL ++T +GA ++ R +L SL CG G+ DA
Sbjct: 917 TLSMRAISKFANLERLDLSSNNKVTIAGAKFIGKACRRLTHL-SLSSCGDCICNGIVDAL 975
Query: 413 LTG---LVSLNVSN-SRITSAGLRHLKPLKNLRSLTLESC 448
+TG LVS N+S+ +ITS L+ L ++L+S+ L +C
Sbjct: 976 ITGQINLVSANLSSCKKITS--LKALATCRSLQSVDLTNC 1013
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 186/415 (44%), Gaps = 66/415 (15%)
Query: 18 RCLTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIH 76
R T +SL R CA++DL L G+ + L+S+ LSG +T
Sbjct: 642 RLQTGLSLVTERCCAIRDLSLCGCLGLKAPQFASLGQNARGLVSLKLSGCRQITPWAFTK 701
Query: 77 L-KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFA-GLINL 133
L + L+ LD ++C ++D ++ L + L L+ R ++ G+ + G L
Sbjct: 702 LFEGLKLLEILDISYCSLVTDQEIKLLSESATGLRCLNLRECKLVSDIGLTFLSQGCTEL 761
Query: 134 VKLDLERCT---RIHG-GLVNL-KGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI 187
V L+L R R+ L+ + +G L +LN+ C I+D+ + L S L+ + +
Sbjct: 762 VDLNLRRSELPFRVTDVALLQIGQGCRSLRALNLHGCELISDTGLSWLASWAKQLRHVNL 821
Query: 188 S-CSKVTDSGIAYL---------------------------KGLQKLTLLNLEGCPVTAA 219
+ C+K+T++G +L G KL LN G + +
Sbjct: 822 ANCTKITNAGARHLGDGCPNLISAVLTNVKRVSDVGLRCLANGCSKLETLNCSGLAMLSD 881
Query: 220 CLDS------LSALGS------LFYLNLNRCQL-SDDGCEKFSKIGSLKVLNLGF-NEIT 265
+D L ALG+ L LN+ C L S SK +L+ L+L N++T
Sbjct: 882 GVDREFGLEGLQALGASSCSTTLKNLNIRGCTLISTLSMRAISKFANLERLDLSSNNKVT 941
Query: 266 DECLVHL-KGLTNLESLNLDSCGIGD---EGLVN--LTGLCNLKCLELSDTQVGSSGLRH 319
+ K L L+L SC GD G+V+ +TG NL LS + +S L+
Sbjct: 942 IAGAKFIGKACRRLTHLSLSSC--GDCICNGIVDALITGQINLVSANLSSCKKITS-LKA 998
Query: 320 LSGLTNLESINLS-FTGISDGSLRKL---AGLSSLKSLNL-DARQITDTGLAALT 369
L+ +L+S++L+ +GI+DG++ +L A L++L+L +TDT L L+
Sbjct: 999 LATCRSLQSVDLTNCSGITDGAILQLTEGAFEPGLRALHLVKCSLVTDTALYWLS 1053
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 135/300 (45%), Gaps = 46/300 (15%)
Query: 192 VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC----QLSDDGC-- 245
VTD GI L +L LNL D++ L + L RC LS GC
Sbjct: 618 VTDEGIQSLSKCSQLQELNL----------DNIFRLQTGLSLVTERCCAIRDLSLCGCLG 667
Query: 246 ---EKFSKIGS----LKVLNL-GFNEITDECLVHL-KGLTNLESLNLDSCGIGDEGLVNL 296
+F+ +G L L L G +IT L +GL LE L++ C + + + L
Sbjct: 668 LKAPQFASLGQNARGLVSLKLSGCRQITPWAFTKLFEGLKLLEILDISYCSLVTDQEIKL 727
Query: 297 --TGLCNLKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSFTG----ISDGSLRKLA-GL 347
L+CL L + + V GL LS G T L +NL + ++D +L ++ G
Sbjct: 728 LSESATGLRCLNLRECKLVSDIGLTFLSQGCTELVDLNLRRSELPFRVTDVALLQIGQGC 787
Query: 348 SSLKSLNLDARQ-ITDTGLAALTSLTG-LTHLDLFG-ARITDSGAAYLRN---------F 395
SL++LNL + I+DTGL+ L S L H++L +IT++GA +L +
Sbjct: 788 RSLRALNLHGCELISDTGLSWLASWAKQLRHVNLANCTKITNAGARHLGDGCPNLISAVL 847
Query: 396 KNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 455
N++ + G G + L +LN S + S G+ L+ L++L SC T ++
Sbjct: 848 TNVKRVSDVGLRCLANGCSKLETLNCSGLAMLSDGVDREFGLEGLQALGASSCSTTLKNL 907
>gi|125979469|ref|XP_001353767.1| GA16643 [Drosophila pseudoobscura pseudoobscura]
gi|54640750|gb|EAL29501.1| GA16643 [Drosophila pseudoobscura pseudoobscura]
Length = 538
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 158/387 (40%), Gaps = 45/387 (11%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEH--------------- 101
S LL +DLS S G L+D L+ L+ C Q+ + EH
Sbjct: 78 SRLLHLDLSESGGLTLGERGLRDLRQLERLNLTRC-QLEELKEEHFPENSSLRNMDVSFN 136
Query: 102 ---------LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
+ L NL +F NN I AF GL L LDL +++ V L
Sbjct: 137 DLRLITGKLMNRLPNLVYANF-SNNLIAEVEPNAFRGLKELQFLDLTTNEQVN---VTLG 192
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
L L+I N + D + L GL NL+ L + + + + + L +L LLN+
Sbjct: 193 ENANLRYLSIG-NNNVRDFLWRRLRGLPNLEELHLDSNWLENLDMGLFLALPRLRLLNVS 251
Query: 213 G---CPVTAACLDSLSALGSLFYLNL--NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
C + + S L L+ N ++ +D F+K+G L+ LNL N+I+
Sbjct: 252 NNNLCEIKGSLFTGPSGRAPLLLLDYSSNNVKVLEDSV--FAKLGDLRTLNLWLNQISKV 309
Query: 268 CLVHLKGLTNLESLNLDSCGIG---DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG-- 322
+GL+ LESL L I DE NLT L+ L+LS + G R G
Sbjct: 310 HPRAFQGLSALESLQLQGNKISALPDEVFSNLTA---LQRLDLSRNSIRQLGARLFGGSL 366
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
L L ++LS I + L+GL L+ L L ++T + L L L +
Sbjct: 367 LGRLTHLDLSRNSIVELHPLSLSGLPHLRELRLSGNKLTALDVRMFAPLRRLQVLAIGEN 426
Query: 383 RITDSGAAYLRNFKNLRSLEICGGGLT 409
R+ L F++L L+I L+
Sbjct: 427 RLEQIEEDILETFEHLSRLDINNNRLS 453
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 155/369 (42%), Gaps = 45/369 (12%)
Query: 116 NNAITAQGMKAFAGLI--NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
+ AI +A L L+ LDL + G L+ L +LE LN+ C + +
Sbjct: 61 HTAIEGDDPRALPALCLSRLLHLDLSESGGLTLGERGLRDLRQLERLNLTRCQ-LEELKE 119
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
+ ++L+++ +S + + + L L N + ++ L L +L
Sbjct: 120 EHFPENSSLRNMDVSFNDLRLITGKLMNRLPNLVYANFSNNLIAEVEPNAFRGLKELQFL 179
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+L ++ + +L+ L++G N + D L+GL NLE L+LDS + + +
Sbjct: 180 DLT---TNEQVNVTLGENANLRYLSIGNNNVRDFLWRRLRGLPNLEELHLDSNWLENLDM 236
Query: 294 VNLTGLCNLKCLELSDTQV---------GSSGLRHL------------------SGLTNL 326
L L+ L +S+ + G SG L + L +L
Sbjct: 237 GLFLALPRLRLLNVSNNNLCEIKGSLFTGPSGRAPLLLLDYSSNNVKVLEDSVFAKLGDL 296
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL------- 379
++NL IS R GLS+L+SL L +I+ ++LT L LDL
Sbjct: 297 RTLNLWLNQISKVHPRAFQGLSALESLQLQGNKISALPDEVFSNLTALQRLDLSRNSIRQ 356
Query: 380 FGARITDSGAAYLRNFKNL---RSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKP 436
GAR+ G + L +L R+ + L+ +GL L L +S +++T+ +R P
Sbjct: 357 LGARLF--GGSLLGRLTHLDLSRNSIVELHPLSLSGLPHLRELRLSGNKLTALDVRMFAP 414
Query: 437 LKNLRSLTL 445
L+ L+ L +
Sbjct: 415 LRRLQVLAI 423
>gi|427735492|ref|YP_007055036.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
gi|427370533|gb|AFY54489.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
Length = 344
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 119/240 (49%), Gaps = 18/240 (7%)
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
SD+KPLS LTNL L + + + S + L L LT L+L ++ + ++ L L
Sbjct: 110 SDIKPLSKLTNLTKLYLDSNNI--SQVKELANLINLTELSLSYNQLSH--VKGITNLTKL 165
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
YLNL+R Q++D + + +L L L N+I E + L L NL L + I +
Sbjct: 166 EYLNLHRNQITD--IRPLANLTNLIKLQLSSNQI--ESIKPLSKLNNLTELIVYQNKINE 221
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
+ +T L NLK L + + S ++ L LTNL + ++ IS+ + LA LS+L
Sbjct: 222 --VKEITNLINLKYLNIGKNNI--SNVKPLWELTNLIELYINENKISN--IETLADLSNL 275
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
K L L QI+D + L LT LT L++ +I D A L N NL L G + +
Sbjct: 276 KELGLWKNQISD--ITPLWQLTNLTKLNIQENKIIDIKA--LANLTNLTYLNAAGNPIQN 331
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 44/214 (20%)
Query: 94 ISDGGLEHLRGLSNLTSLSF--RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNL 151
+S L H++G++NLT L + N IT ++ A L NL+KL L + ++
Sbjct: 148 LSYNQLSHVKGITNLTKLEYLNLHRNQIT--DIRPLANLTNLIKLQLS-----SNQIESI 200
Query: 152 KGLMKLESLN--IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
K L KL +L I + N I +++K ++ L NLK L I + I+ +K L +LT
Sbjct: 201 KPLSKLNNLTELIVYQNKI--NEVKEITNLINLKYLNIG-----KNNISNVKPLWELT-- 251
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
+L L +N ++S+ E + + +LK L L N+I+D +
Sbjct: 252 -------------------NLIELYINENKISN--IETLADLSNLKELGLWKNQISD--I 288
Query: 270 VHLKGLTNLESLNLDSCGIGD-EGLVNLTGLCNL 302
L LTNL LN+ I D + L NLT L L
Sbjct: 289 TPLWQLTNLTKLNIQENKIIDIKALANLTNLTYL 322
>gi|85679238|gb|ABC72035.1| InlA [Listeria monocytogenes]
Length = 791
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 180/374 (48%), Gaps = 65/374 (17%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
L+ +NL ++F F Q++D + L+ L+ L + NN IT + A L NL L
Sbjct: 93 LEYLNNLTQINFGFN-QLTD--ITPLKDLTKLVDI-VMNNNQIT--DISPLANLTNLTGL 146
Query: 137 DL--ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD 194
L + T I L NL L +LE + T SD+ LSGLTNL+ L ++VTD
Sbjct: 147 TLFNNQITDIDA-LKNLTNLNRLE------LSSNTISDISALSGLTNLQQLSFG-NQVTD 198
Query: 195 SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSL 254
LK L LT LE +++ + +S L K + + SL
Sbjct: 199 -----LKPLANLT--TLERLDISSNKVSDISVLA------------------KLTNLESL 233
Query: 255 KVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS 314
N N+I+D + L LTNL+ L+L+ + D G L L NL L+L++ Q+
Sbjct: 234 IATN---NQISD--ITPLGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQI-- 284
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 374
S L LSGLT L + L IS+ + LAGL++L +L L+ Q+ D ++ +++L L
Sbjct: 285 SNLAPLSGLTKLTELKLGANQISN--ISPLAGLTALTNLELNENQLED--ISPISNLKNL 340
Query: 375 THLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAG 430
T+L L+ I+D + + + L+ L ++D A LT + L+ +++I+
Sbjct: 341 TYLTLYFNNISD--ISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQIS--- 395
Query: 431 LRHLKPLKNLRSLT 444
L PL NL +T
Sbjct: 396 --DLTPLANLTRIT 407
>gi|371944024|gb|AEX61852.1| putative F-box_LRR-repeat protein [Megavirus courdo7]
Length = 559
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 156/354 (44%), Gaps = 85/354 (24%)
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC 165
N+ S++ R N IT + ++ G+ K++L C I G K L E++N+ C
Sbjct: 65 QNIKSINLSRTN-ITDKELQFLRGI---TKINLSCCKNITGS--GFKYLQLAENINLSGC 118
Query: 166 NCITDSDMKPLSGL-----------------------------------TNLKSLQISCS 190
N I S+++ LS + T +K + +S +
Sbjct: 119 NQIIGSELRYLSNIVKINLSRTNIDDQAIEYLIFGQKIDGNKEILIQPQTKIKFIDLSFT 178
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLF-------------YLN-- 234
K+T+ I+YL ++ ++N+ C VT++CL L + ++ YLN
Sbjct: 179 KITNCSISYLSNVK---IININSCEFVTSSCLQYLHNITHIYMNTYNVIIGDNIKYLNKI 235
Query: 235 ----LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL---ESLNLDSCG 287
LN LSD+ E I L++ N ++IT + L LK L L S N+D+
Sbjct: 236 KLLVLNDHTLSDNQLEYIQNIEHLEIYNTS-DKITHQGLQKLKNLKILSLRHSYNIDTIS 294
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAG 346
+ + L N C +++D+ L L +LE+INLS+ I+D L+ L
Sbjct: 295 FIPTNKIRILDLKN--CHQVTDSS--------LQYLPHLETINLSWCYKITDNGLKNLQH 344
Query: 347 LSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
++ ++NL +ITD GL L+ + + +ITD G +LRN KN++
Sbjct: 345 VT---NINLSGCHRITDNGLVYLSKADSIN--ISYCIKITDDGLKHLRNVKNIK 393
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 147/339 (43%), Gaps = 89/339 (26%)
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTL-------------------LNLEGCPVTAACL 221
N+KS+ +S + +TD + +L+G+ K+ L +NL GC
Sbjct: 66 NIKSINLSRTNITDKELQFLRGITKINLSCCKNITGSGFKYLQLAENINLSGCNQIIG-- 123
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCE---------------------------KFSKI--- 251
L L ++ +NL+R + D E F+KI
Sbjct: 124 SELRYLSNIVKINLSRTNIDDQAIEYLIFGQKIDGNKEILIQPQTKIKFIDLSFTKITNC 183
Query: 252 -----GSLKVLNLGFNE-ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
++K++N+ E +T CL +L +T++ +N + IGD N+ L +K L
Sbjct: 184 SISYLSNVKIININSCEFVTSSCLQYLHNITHI-YMNTYNVIIGD----NIKYLNKIKLL 238
Query: 306 ELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL---KSLNLDARQITD 362
L+D + + L ++ + +LE N S I+ L+KL L L S N+D
Sbjct: 239 VLNDHTLSDNQLEYIQNIEHLEIYNTS-DKITHQGLQKLKNLKILSLRHSYNIDTISFIP 297
Query: 363 TGLAAL-----------TSLTGLTHLDLFG----ARITDSGAAYLRNFKNLRSLEICG-G 406
T + +SL L HL+ +ITD+G L+N +++ ++ + G
Sbjct: 298 TNKIRILDLKNCHQVTDSSLQYLPHLETINLSWCYKITDNG---LKNLQHVTNINLSGCH 354
Query: 407 GLTDAGLTGLV---SLNVSNS-RITSAGLRHLKPLKNLR 441
+TD GL L S+N+S +IT GL+HL+ +KN++
Sbjct: 355 RITDNGLVYLSKADSINISYCIKITDDGLKHLRNVKNIK 393
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 160/329 (48%), Gaps = 40/329 (12%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
L+ ++D+ L ++++ +L+ +N +I+ GL+ L+ NL LS R + I
Sbjct: 240 LNDHTLSDNQLEYIQNIEHLEI--YNTSDKITHQGLQKLK---NLKILSLRHSYNIDTI- 293
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+F + LDL+ C ++ +L+ L LE++N+ WC ITD+ +K L +TN+
Sbjct: 294 --SFIPTNKIRILDLKNCHQVTDS--SLQYLPHLETINLSWCYKITDNGLKNLQHVTNIN 349
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGS--LFYLNLNRCQL 240
C ++TD+G+ Y L K +N+ C +T L L + + L Y + + +
Sbjct: 350 LS--GCHRITDNGLVY---LSKADSINISYCIKITDDGLKHLRNVKNIKLGYHSTSDIYM 404
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGL 299
+ FSK +K + ITD + L L N +SL+L C I D+GL L+
Sbjct: 405 IEYFEYDFSKEKYIKEIKNTKQLITD---IGLSYLINTQSLSLLYCENITDDGLQYLSK- 460
Query: 300 CNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN---- 354
+K + +++ ++ +GL++LS + + INLS + SL+ L+ S +K N
Sbjct: 461 --IKSISINNCPKIIGTGLKYLS---DCQKINLSNVRLCKSSLKYLSLFSKIKINNNFTD 515
Query: 355 ------LDARQITDTGLAALTSLTGLTHL 377
A++I +G +T GL HL
Sbjct: 516 DDLKYLSRAKKIKLSGFNKITK-NGLKHL 543
>gi|219821258|gb|ACL37750.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 180/374 (48%), Gaps = 65/374 (17%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
L+ +NL ++F F Q++D + L+ L+ L + NN IT + A L NL L
Sbjct: 36 LEYLNNLTQINFGFN-QLTD--ITPLKDLTKLVDI-VMNNNQIT--DISPLANLTNLTGL 89
Query: 137 DL--ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD 194
L + T I L NL L +LE + T SD+ LSGLTNL+ L ++VTD
Sbjct: 90 TLFNNQITDIDA-LKNLTNLNRLE------LSSNTISDISALSGLTNLQQLSFG-NQVTD 141
Query: 195 SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSL 254
LK L LT LE +++ + +S L K + + SL
Sbjct: 142 -----LKPLANLTT--LERLDISSNKVSDISVLA------------------KLTNLESL 176
Query: 255 KVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS 314
N N+I+D + L LTNL+ L+L+ + D G L L NL L+L++ Q+
Sbjct: 177 IATN---NQISD--ITPLGILTNLDELSLNGNQLKDIGT--LASLTNLTDLDLANNQI-- 227
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 374
S L LSGLT L + L IS+ + LAGL++L +L L+ Q+ D ++ +++L L
Sbjct: 228 SNLAPLSGLTKLTELKLGANQISN--ISPLAGLTALTNLELNENQLED--ISPISNLKNL 283
Query: 375 THLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAG 430
T+L L+ I+D + + + L+ L ++D A LT + L+ +++I+
Sbjct: 284 TYLTLYFNNISD--ISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQIS--- 338
Query: 431 LRHLKPLKNLRSLT 444
L PL NL +T
Sbjct: 339 --DLTPLANLTRIT 350
>gi|388455805|ref|ZP_10138100.1| hypothetical protein FdumT_04498 [Fluoribacter dumoffii Tex-KL]
Length = 398
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 103/200 (51%)
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
LKSL + + + + GI +L+ + ++LE + + ++ +LFYLNL++ +
Sbjct: 194 LKSLYLGNNHLGNEGIKFLENNHSINFIDLENNNIDQDGIPTIVRKPNLFYLNLDKNPIH 253
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
+ G ++ ++ L++ + E L L +L LN+D IGDEG++ L + +
Sbjct: 254 NAGAALLAQASMVRWLSIADCRVGIEGAQALAALHHLAMLNIDKNFIGDEGIIALAKMRS 313
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
L L ++ +G G ++L+ L++++L+ I D LA ++L +L++ QI+
Sbjct: 314 LNNLYANNNSIGDEGAKNLANAIQLQNLSLNHNQIGDEGALALAETATLYALDVGYNQIS 373
Query: 362 DTGLAALTSLTGLTHLDLFG 381
G+ AL + L +L+ G
Sbjct: 374 VIGVNALKNNEALAYLNTQG 393
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 119/264 (45%), Gaps = 6/264 (2%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
I G E L S L LS +N I A G K A L+ L L R ++I G +
Sbjct: 131 HIGPYGAEALAKNSTLFFLSLD-SNPIGASGAKELAKNKTLIHLSL-RKSQI--GAAGAR 186
Query: 153 GLMKLESLNIKWC--NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
L E+L + N + + +K L ++ + + + + GI + L LN
Sbjct: 187 ALFANETLKSLYLGNNHLGNEGIKFLENNHSINFIDLENNNIDQDGIPTIVRKPNLFYLN 246
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
L+ P+ A L+ + +L++ C++ +G + + + L +LN+ N I DE ++
Sbjct: 247 LDKNPIHNAGAALLAQASMVRWLSIADCRVGIEGAQALAALHHLAMLNIDKNFIGDEGII 306
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN 330
L + +L +L ++ IGDEG NL L+ L L+ Q+G G L+ L +++
Sbjct: 307 ALAKMRSLNNLYANNNSIGDEGAKNLANAIQLQNLSLNHNQIGDEGALALAETATLYALD 366
Query: 331 LSFTGISDGSLRKLAGLSSLKSLN 354
+ + IS + L +L LN
Sbjct: 367 VGYNQISVIGVNALKNNEALAYLN 390
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 6/268 (2%)
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
+ LS T+L L + + + G L L L+L+ P+ A+ L+ +L +L
Sbjct: 114 EALSQNTSLIYLLLGENHIGPYGAEALAKNSTLFFLSLDSNPIGASGAKELAKNKTLIHL 173
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+L + Q+ G +LK L LG N + +E + L+ ++ ++L++ I +G+
Sbjct: 174 SLRKSQIGAAGARALFANETLKSLYLGNNHLGNEGIKFLENNHSINFIDLENNNIDQDGI 233
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
+ NL L L + ++G L+ + + ++++ + + LA L L L
Sbjct: 234 PTIVRKPNLFYLNLDKNPIHNAGAALLAQASMVRWLSIADCRVGIEGAQALAALHHLAML 293
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGL 413
N+D I D G+ AL + L +L I D GA L N L++L + + D G
Sbjct: 294 NIDKNFIGDEGIIALAKMRSLNNLYANNNSIGDEGAKNLANAIQLQNLSLNHNQIGDEGA 353
Query: 414 TGLV------SLNVSNSRITSAGLRHLK 435
L +L+V ++I+ G+ LK
Sbjct: 354 LALAETATLYALDVGYNQISVIGVNALK 381
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 116/273 (42%), Gaps = 13/273 (4%)
Query: 197 IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 256
+AYL ++T L+L + + L++ + YL L ++ G E S+ SL
Sbjct: 65 VAYLDKHPEITRLSLSDNQIGYQGAELLASNTHIRYLFLTGNRIGSLGAEALSQNTSLIY 124
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
L LG N I L + L L+LDS IG G L L L L +Q+G++G
Sbjct: 125 LLLGENHIGPYGAEALAKNSTLFFLSLDSNPIGASGAKELAKNKTLIHLSLRKSQIGAAG 184
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
R L L+S+ L + + ++ L S+ ++L+ I G+ + L +
Sbjct: 185 ARALFANETLKSLYLGNNHLGNEGIKFLENNHSINFIDLENNNIDQDGIPTIVRKPNLFY 244
Query: 377 LDLFGARITDSGAAYLRNFKNLRSLEICG------GGLTDAGLTGLVSLNVSNSRITSAG 430
L+L I ++GAA L +R L I G A L L LN+ + I G
Sbjct: 245 LNLDKNPIHNAGAALLAQASMVRWLSIADCRVGIEGAQALAALHHLAMLNIDKNFIGDEG 304
Query: 431 LRHLKPLKNLRSLTL-------ESCKVTANDIK 456
+ L +++L +L E K AN I+
Sbjct: 305 IIALAKMRSLNNLYANNNSIGDEGAKNLANAIQ 337
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 111/272 (40%), Gaps = 6/272 (2%)
Query: 185 LQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
L +S +++ G L + L L G + + ++LS SL YL L + G
Sbjct: 77 LSLSDNQIGYQGAELLASNTHIRYLFLTGNRIGSLGAEALSQNTSLIYLLLGENHIGPYG 136
Query: 245 CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC 304
E +K +L L+L N I L L L+L IG G L LK
Sbjct: 137 AEALAKNSTLFFLSLDSNPIGASGAKELAKNKTLIHLSLRKSQIGAAGARALFANETLKS 196
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 364
L L + +G+ G++ L ++ I+L I + + +L LNLD I + G
Sbjct: 197 LYLGNNHLGNEGIKFLENNHSINFIDLENNNIDQDGIPTIVRKPNLFYLNLDKNPIHNAG 256
Query: 365 LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLV------S 418
A L + + L + R+ GA L +L L I + D G+ L +
Sbjct: 257 AALLAQASMVRWLSIADCRVGIEGAQALAALHHLAMLNIDKNFIGDEGIIALAKMRSLNN 316
Query: 419 LNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 450
L +N+ I G ++L L++L+L ++
Sbjct: 317 LYANNNSIGDEGAKNLANAIQLQNLSLNHNQI 348
>gi|320165719|gb|EFW42618.1| non-receptor protein kinase [Capsaspora owczarzaki ATCC 30864]
Length = 978
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 100/234 (42%), Gaps = 24/234 (10%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
+GLT L+ L + ++++ L L L L G +T + S L L L L
Sbjct: 19 FTGLTALQILSLFNNQISSVAANAFTSLTALVQLQLYGNQITTIPASAFSGLSKLSLLQL 78
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
N LS F+ + +L L+L N+IT GLT L++L L++ I
Sbjct: 79 NNNWLSAIPTSAFTGLTALTQLSLYGNQITTISASAFAGLTALQALYLNNNTITTIAANA 138
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL-----------SFTG--------- 335
GL L L+LSD+Q+ S S L L +NL +FTG
Sbjct: 139 FAGLTALNWLDLSDSQITSIPANVFSSLPALAQLNLYNNWLSAVPTSAFTGLTALTQLTM 198
Query: 336 ----ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
I+ S GL++L L L + QIT +A T LT L L L+G +IT
Sbjct: 199 YGNRITTISANAFTGLNALAQLFLQSNQITTISASAFTGLTALKQLYLYGNQIT 252
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 103/245 (42%), Gaps = 9/245 (3%)
Query: 190 SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS 249
S V S L LQ L+L N + V A SL+AL L L Q++ FS
Sbjct: 12 STVPSSAFTGLTALQILSLFNNQISSVAANAFTSLTAL---VQLQLYGNQITTIPASAFS 68
Query: 250 KIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSD 309
+ L +L L N ++ GLT L L+L I GL L+ L L++
Sbjct: 69 GLSKLSLLQLNNNWLSAIPTSAFTGLTALTQLSLYGNQITTISASAFAGLTALQALYLNN 128
Query: 310 TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALT 369
+ + +GLT L ++LS + I+ + L +L LNL ++ +A T
Sbjct: 129 NTITTIAANAFAGLTALNWLDLSDSQITSIPANVFSSLPALAQLNLYNNWLSAVPTSAFT 188
Query: 370 SLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSN 423
LT LT L ++G RIT A L L + +T GLT L L +
Sbjct: 189 GLTALTQLTMYGNRITTISANAFTGLNALAQLFLQSNQITTISASAFTGLTALKQLYLYG 248
Query: 424 SRITS 428
++IT+
Sbjct: 249 NQITT 253
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 6/235 (2%)
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
+ + L +L L+L Q+S F+ + +L L L N+IT GL+ L L
Sbjct: 18 AFTGLTALQILSLFNNQISSVAANAFTSLTALVQLQLYGNQITTIPASAFSGLSKLSLLQ 77
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
L++ + TGL L L L Q+ + +GLT L+++ L+ I+ +
Sbjct: 78 LNNNWLSAIPTSAFTGLTALTQLSLYGNQITTISASAFAGLTALQALYLNNNTITTIAAN 137
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
AGL++L L+L QIT +SL L L+L+ ++ + L L
Sbjct: 138 AFAGLTALNWLDLSDSQITSIPANVFSSLPALAQLNLYNNWLSAVPTSAFTGLTALTQLT 197
Query: 403 ICGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
+ G +T GL L L + +++IT+ L L+ L L ++T
Sbjct: 198 MYGNRITTISANAFTGLNALAQLFLQSNQITTISASAFTGLTALKQLYLYGNQIT 252
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 88/230 (38%), Gaps = 26/230 (11%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
QI+ GLS L+ L NN ++A AF GL L +L L
Sbjct: 58 QITTIPASAFSGLSKLSLLQLN-NNWLSAIPTSAFTGLTALTQLSL-------------- 102
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
+ N IT +GLT L++L ++ + +T GL L L+L
Sbjct: 103 -----------YGNQITTISASAFAGLTALQALYLNNNTITTIAANAFAGLTALNWLDLS 151
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
+T+ + S+L +L LNL LS F+ + +L L + N IT
Sbjct: 152 DSQITSIPANVFSSLPALAQLNLYNNWLSAVPTSAFTGLTALTQLTMYGNRITTISANAF 211
Query: 273 KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG 322
GL L L L S I TGL LK L L Q+ + +G
Sbjct: 212 TGLNALAQLFLQSNQITTISASAFTGLTALKQLYLYGNQITTISANAFAG 261
>gi|290974240|ref|XP_002669854.1| predicted protein [Naegleria gruberi]
gi|284083406|gb|EFC37110.1| predicted protein [Naegleria gruberi]
Length = 357
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 107/241 (44%), Gaps = 22/241 (9%)
Query: 189 CSKVTDSGIAYLK-----GLQKLTLLNLEGCPVTA--ACLDSLSALG------------- 228
C + + YL L++L L+ LE V A L+SLS +G
Sbjct: 89 CPYSFEEFVKYLDECQFDSLKRLNLIGLEVSNVVARFGSLESLSLIGMGAEIGNSIGNLS 148
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
L YLNLN ++ + C+ K +K LNL N+I +E ++L L NL L L+ C I
Sbjct: 149 RLTYLNLNASSVTSESCQYIQKCELIKNLNLSDNKIGNESCLYLTKLKNLTILRLEDCNI 208
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
++G+ +L+ + L L +S ++ G ++ L NL S L S S++ + L
Sbjct: 209 SEKGVEHLSQIETLTILNVSKNRIEDDGFVNICKLKNLTS--LKAASCSVESIKNITNLI 266
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL 408
L SLNL I + G+ + LT L L L YL ++ L++ L
Sbjct: 267 KLTSLNLGQNSIDNEGVKIIGELTNLKTLTLENNVFQPEAVQYLTKLSSMEVLDLRDNNL 326
Query: 409 T 409
+
Sbjct: 327 S 327
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 94/181 (51%), Gaps = 4/181 (2%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV-TAACLDSLSALGSLFYLN 234
+ L+ L L ++ S VT Y++ + + LNL + +CL L+ L +L L
Sbjct: 144 IGNLSRLTYLNLNASSVTSESCQYIQKCELIKNLNLSDNKIGNESCL-YLTKLKNLTILR 202
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
L C +S+ G E S+I +L +LN+ N I D+ V++ L NL SL SC + E +
Sbjct: 203 LEDCNISEKGVEHLSQIETLTILNVSKNRIEDDGFVNICKLKNLTSLKAASCSV--ESIK 260
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
N+T L L L L + + G++ + LTNL+++ L +++ L LSS++ L+
Sbjct: 261 NITNLIKLTSLNLGQNSIDNEGVKIIGELTNLKTLTLENNVFQPEAVQYLTKLSSMEVLD 320
Query: 355 L 355
L
Sbjct: 321 L 321
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 85/160 (53%), Gaps = 7/160 (4%)
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
+K+L +S +K+ + YL L+ LT+L LE C ++ ++ LS + +L LN+++ ++
Sbjct: 174 IKNLNLSDNKIGNESCLYLTKLKNLTILRLEDCNISEKGVEHLSQIETLTILNVSKNRIE 233
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
DDG K+ +L L + E + ++ L L SLNL I +EG+ + L N
Sbjct: 234 DDGFVNICKLKNLTSLKAA--SCSVESIKNITNLIKLTSLNLGQNSIDNEGVKIIGELTN 291
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESI-----NLSFTGI 336
LK L L + +++L+ L+++E + NLSF +
Sbjct: 292 LKTLTLENNVFQPEAVQYLTKLSSMEVLDLRDNNLSFDNV 331
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 6/174 (3%)
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
LESL+L G+G E ++ L L L L+ + V S +++ ++++NLS I
Sbjct: 128 LESLSL--IGMGAEIGNSIGNLSRLTYLNLNASSVTSESCQYIQKCELIKNLNLSDNKIG 185
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
+ S L L +L L L+ I++ G+ L+ + LT L++ RI D G + KN
Sbjct: 186 NESCLYLTKLKNLTILRLEDCNISEKGVEHLSQIETLTILNVSKNRIEDDGFVNICKLKN 245
Query: 398 LRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 447
L SL+ + L L SLN+ + I + G++ + L NL++LTLE+
Sbjct: 246 LTSLKAASCSVESIKNITNLIKLTSLNLGQNSIDNEGVKIIGELTNLKTLTLEN 299
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 5/151 (3%)
Query: 61 SVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT 120
+++LS + + + ++L NL L C IS+ G+EHL + LT L+ + N I
Sbjct: 176 NLNLSDNKIGNESCLYLTKLKNLTILRLEDC-NISEKGVEHLSQIETLTILNVSK-NRIE 233
Query: 121 AQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT 180
G L NL L C+ + N+ L+KL SLN+ N I + +K + LT
Sbjct: 234 DDGFVNICKLKNLTSLKAASCSV--ESIKNITNLIKLTSLNLGQ-NSIDNEGVKIIGELT 290
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNL 211
NLK+L + + + YL L + +L+L
Sbjct: 291 NLKTLTLENNVFQPEAVQYLTKLSSMEVLDL 321
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 82/197 (41%), Gaps = 27/197 (13%)
Query: 262 NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS 321
NE +C + LD C +NL GL E+S+ ++
Sbjct: 83 NEFVSDCPYSFEEFVKY----LDECQFDSLKRLNLIGL------EVSNV---------VA 123
Query: 322 GLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG 381
+LES++L G G+ + LS L LNL+A +T + + +L+L
Sbjct: 124 RFGSLESLSLIGMGAEIGN--SIGNLSRLTYLNLNASSVTSESCQYIQKCELIKNLNLSD 181
Query: 382 ARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRITSAGLRHLK 435
+I + YL KNL L + +++ G + L LNVS +RI G ++
Sbjct: 182 NKIGNESCLYLTKLKNLTILRLEDCNISEKGVEHLSQIETLTILNVSKNRIEDDGFVNIC 241
Query: 436 PLKNLRSLTLESCKVTA 452
LKNL SL SC V +
Sbjct: 242 KLKNLTSLKAASCSVES 258
>gi|18421172|ref|NP_568502.1| F-box protein [Arabidopsis thaliana]
gi|26449578|dbj|BAC41915.1| unknown protein [Arabidopsis thaliana]
gi|29028992|gb|AAO64875.1| At5g27920 [Arabidopsis thaliana]
gi|332006361|gb|AED93744.1| F-box protein [Arabidopsis thaliana]
Length = 642
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 190/439 (43%), Gaps = 79/439 (17%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
++D +D++ L S+D+S +T+ + + L+ LD C I DGGL+ L
Sbjct: 185 ISDLGIDLLCKICKGLKSLDVSYLKITNDSIRSIALLVKLEVLDMVSCPLIDDGGLQFLE 244
Query: 104 -GLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERC-TRIHGGLVN-LKGLMKLES 159
G +L + R + ++ G+ + G ++ L C + + G + +KGL L++
Sbjct: 245 NGSPSLQEVDVTRCDRVSLSGLISIVRGHPDIQLLKASHCVSEVSGSFLKYIKGLKHLKT 304
Query: 160 LNI-------------------------KWCNCITDSDMKPLS-GLTNLKSLQISCSK-V 192
+ I C +TD M L+ NLK+L ++C V
Sbjct: 305 IWIDGAHVSDSSLVSLSSSCRSLMEIGLSRCVDVTDIGMISLARNCLNLKTLNLACCGFV 364
Query: 193 TDSGI-AYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFY-LNLNRCQ-LSDDGCEKF 248
TD I A + + L L LE C +T L SL L L+L C ++D G E
Sbjct: 365 TDVAISAVAQSCRNLGTLKLESCHLITEKGLQSLGCYSMLVQELDLTDCYGVNDRGLEYI 424
Query: 249 SKIGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLTGLCN---- 301
SK +L+ L LG I+D+ + H+ + L L+L C G GD+GL L+ C
Sbjct: 425 SKCSNLQRLKLGLCTNISDKGIFHIGSKCSKLLELDLYRCAGFGDDGLAALSRGCKSLNR 484
Query: 302 ---LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
C EL+DT G +R L L++LE L GL +
Sbjct: 485 LILSYCCELTDT--GVEQIRQLELLSHLE----------------LRGL----------K 516
Query: 359 QITDTGLAALTS-LTGLTHLDL-FGARITDSGAAYLRNF-KNLRSLEICGGGLTDAGLTG 415
IT GLAA+ S L +LD+ I DSG L F KNLR + +C ++D L
Sbjct: 517 NITGVGLAAIASGCKKLGYLDVKLCENIDDSGFWALAYFSKNLRQINLCNCSVSDTALCM 576
Query: 416 LVSLNVSNSRITSAGLRHL 434
L+S + SR+ L HL
Sbjct: 577 LMS---NLSRVQDVDLVHL 592
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 215/434 (49%), Gaps = 59/434 (13%)
Query: 80 CSNLQSLDFNFCIQISDGGLEHL----RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
CSNL + +C++ISD G++ L +GL +L +S+ + IT +++ A L+ L
Sbjct: 171 CSNLNKISLKWCMEISDLGIDLLCKICKGLKSL-DVSYLK---ITNDSIRSIALLVKLEV 226
Query: 136 LDLERCTRI-HGGLVNLK-GLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQIS--CS 190
LD+ C I GGL L+ G L+ +++ C+ ++ S + + G +++ L+ S S
Sbjct: 227 LDMVSCPLIDDGGLQFLENGSPSLQEVDVTRCDRVSLSGLISIVRGHPDIQLLKASHCVS 286
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPV-TAACLDSLSALGSLFYLNLNRC-QLSDDGCEKF 248
+V+ S + Y+KGL+ L + ++G V ++ + S+ SL + L+RC ++D G
Sbjct: 287 EVSGSFLKYIKGLKHLKTIWIDGAHVSDSSLVSLSSSCRSLMEIGLSRCVDVTDIGMISL 346
Query: 249 SK-IGSLKVLNL---GFNEITDECLVHL-KGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
++ +LK LNL GF +TD + + + NL +L L+SC L+ GL +L
Sbjct: 347 ARNCLNLKTLNLACCGF--VTDVAISAVAQSCRNLGTLKLESC-----HLITEKGLQSLG 399
Query: 304 C-------LELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLN 354
C L+L+D V GL ++S +NL+ + L T ISD + + S K L
Sbjct: 400 CYSMLVQELDLTDCYGVNDRGLEYISKCSNLQRLKLGLCTNISDKGIFHIGSKCS-KLLE 458
Query: 355 LDARQIT---DTGLAALTS-LTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG-GGL 408
LD + D GLAAL+ L L L + +TD+G +R + L LE+ G +
Sbjct: 459 LDLYRCAGFGDDGLAALSRGCKSLNRLILSYCCELTDTGVEQIRQLELLSHLELRGLKNI 518
Query: 409 TDAGLTGLVS-------LNVS-NSRITSAGLRHLKPL-KNLRSLTLESCKVT-------A 452
T GL + S L+V I +G L KNLR + L +C V+
Sbjct: 519 TGVGLAAIASGCKKLGYLDVKLCENIDDSGFWALAYFSKNLRQINLCNCSVSDTALCMLM 578
Query: 453 NDIKRLQSRDLPNL 466
+++ R+Q DL +L
Sbjct: 579 SNLSRVQDVDLVHL 592
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 93/186 (50%), Gaps = 15/186 (8%)
Query: 25 LEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHL-KDCS 81
LE C+ LQ L LG ++DK + I S+ S LL +DL + D GL L + C
Sbjct: 421 LEYISKCSNLQRLKLGLCTNISDKGIFHIGSKCSKLLELDLYRCAGFGDDGLAALSRGCK 480
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLER 140
+L L ++C +++D G+E +R L L+ L R IT G+ A A G L LD++
Sbjct: 481 SLNRLILSYCCELTDTGVEQIRQLELLSHLELRGLKNITGVGLAAIASGCKKLGYLDVKL 540
Query: 141 CTRI-HGGLVNLKGLMK-LESLNIKWCNC-ITDSDMKPLSGLTNLKSLQ----ISCSKVT 193
C I G L K L +N+ CNC ++D+ + L ++NL +Q + S+VT
Sbjct: 541 CENIDDSGFWALAYFSKNLRQINL--CNCSVSDTALCML--MSNLSRVQDVDLVHLSRVT 596
Query: 194 DSGIAY 199
G +
Sbjct: 597 VEGFEF 602
>gi|425701584|gb|AFX92746.1| putative F-box/LRR-repeat protein [Megavirus courdo11]
Length = 559
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 179/420 (42%), Gaps = 102/420 (24%)
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC 165
N+ S++ R N IT + ++ G+ K++L C I G K L E++N+ C
Sbjct: 65 QNIKSINLSRTN-ITDKELQFLCGI---TKINLSCCKNITGS--GFKYLQLAENINLSGC 118
Query: 166 NCITDSDMKPLSGL-----------------------------------TNLKSLQISCS 190
N I S+++ LS + T +K + +S +
Sbjct: 119 NQIIGSELRYLSNIVKINLSRTNIDDQAIEYLIFGQKIDGNKEILIQPQTKIKFIDLSFT 178
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLF-------------YLN-- 234
K+T+ I+YL ++ ++N+ C VT++CL L + ++ YLN
Sbjct: 179 KITNCSISYLSNVK---IININSCEFVTSSCLQYLHNITHIYMNTYNVIIGDNIKYLNKI 235
Query: 235 ----LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL---ESLNLDSCG 287
LN LSD+ E I L++ N ++IT + L LK L L S N+D+
Sbjct: 236 KLLVLNDHTLSDNQLEYIQNIEHLEIYNTS-DKITHQGLQKLKNLKILSLRHSYNIDTIS 294
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAG 346
+ + L N C +++D+ L L +LE+INLS+ I+D L+ L
Sbjct: 295 FIPTNKIRILDLKN--CHQVTDSS--------LQYLPHLETINLSWCYKITDNGLKNLQH 344
Query: 347 LSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
++ ++NL +ITD GL L+ + + +ITD G +LRN KN++ +
Sbjct: 345 VT---NINLSGCHRITDNGLVYLSKADSIN--ISYCIKITDDGLKHLRNVKNIK---LGY 396
Query: 406 GGLTDAGLTGLVSLNVSNSR-----------ITSAGLRHLKPLKNLRSLTLESCKVTAND 454
+D + + S + IT GL + L N +SL+L C+ +D
Sbjct: 397 HSTSDIYMIEYFEYDFSKEKYIKEIKNTKQLITDIGLSY---LINTQSLSLLYCENITDD 453
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 160/329 (48%), Gaps = 40/329 (12%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
L+ ++D+ L ++++ +L+ +N +I+ GL+ L+ NL LS R + I
Sbjct: 240 LNDHTLSDNQLEYIQNIEHLEI--YNTSDKITHQGLQKLK---NLKILSLRHSYNIDTI- 293
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+F + LDL+ C ++ +L+ L LE++N+ WC ITD+ +K L +TN+
Sbjct: 294 --SFIPTNKIRILDLKNCHQVTDS--SLQYLPHLETINLSWCYKITDNGLKNLQHVTNIN 349
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGS--LFYLNLNRCQL 240
C ++TD+G+ Y L K +N+ C +T L L + + L Y + + +
Sbjct: 350 LS--GCHRITDNGLVY---LSKADSINISYCIKITDDGLKHLRNVKNIKLGYHSTSDIYM 404
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGL 299
+ FSK +K + ITD + L L N +SL+L C I D+GL L+
Sbjct: 405 IEYFEYDFSKEKYIKEIKNTKQLITD---IGLSYLINTQSLSLLYCENITDDGLQYLSK- 460
Query: 300 CNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN---- 354
+K + +++ ++ +GL++LS + + INLS + SL+ L+ S +K N
Sbjct: 461 --IKSISINNCPKIIGTGLKYLS---DCQKINLSNVRLCKSSLKYLSLFSKIKINNNFTD 515
Query: 355 ------LDARQITDTGLAALTSLTGLTHL 377
A++I +G +T GL HL
Sbjct: 516 DDLKYLSRAKKIKLSGFNKITK-NGLKHL 543
>gi|433448864|ref|ZP_20411729.1| Internalin A [Weissella ceti NC36]
gi|429539253|gb|ELA07290.1| Internalin A [Weissella ceti NC36]
Length = 1042
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 152/319 (47%), Gaps = 47/319 (14%)
Query: 136 LDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITD--SDMKPLSGLTNLKSLQISCSKVT 193
L +E + G+ +L GL E+ N+KW + + S ++PL + NL L + +K
Sbjct: 68 LKIESLNLTYSGVTDLSGLE--EAKNLKWLDLTGNAISSLEPLGQVHNLSFLSLRFNKTK 125
Query: 194 D-SGIAYLKGLQKLTLLNLEGC-----PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEK 247
D +A LK + LNL G P A + L+ L +L N QL D
Sbjct: 126 DIPDLAPLK-TTAIKELNLVGNDYGLEPQKMAAISHLTTLETLEMQNNKLTQLPD----- 179
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL 307
S++ +L+ L + N++TD V K + L L ++S I D ++ L NL+ L +
Sbjct: 180 LSQLTNLRFLGVAGNKLTDVSGV--KNMVRLTGLEVNSNQITD--FEPISHLTNLERLHV 235
Query: 308 SDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR-QITDTGLA 366
+ + SS + L LT L+ N S G+S+ + AG+ ++SL +D QI+D L+
Sbjct: 236 GNNR--SSDISSLKTLTKLKKGNFSQMGLSNEQMTVFAGMKDMESLAIDFNDQISD--LS 291
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRI 426
+L+ LT LT LD +T +L L AGLT L +L SN+++
Sbjct: 292 SLSQLTNLTTLDFSKDGVT-----------SLAPL---------AGLTNLQTLGFSNNKV 331
Query: 427 TSAGLRHLKPLKNLRSLTL 445
+ + LK + NL SLT+
Sbjct: 332 SDISV--LKNMPNLSSLTM 348
>gi|290892592|ref|ZP_06555585.1| InlE protein [Listeria monocytogenes FSL J2-071]
gi|404406718|ref|YP_006689433.1| internalin E [Listeria monocytogenes SLCC2376]
gi|290557901|gb|EFD91422.1| InlE protein [Listeria monocytogenes FSL J2-071]
gi|404240867|emb|CBY62267.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC2376]
Length = 499
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 107/213 (50%), Gaps = 38/213 (17%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
LTNL L+++ +++TD ++ L L K+T L L G P L +SA+ L
Sbjct: 95 LTNLSELELTDNQITD--VSPLANLTKITELGLSGNP-----LKDVSAIAGL-------- 139
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
SLK+L+L + +ITD + L GLTNL+ LNLD I D + L
Sbjct: 140 -------------KSLKMLHLIYTDITD--VTSLAGLTNLQELNLDINQITD--ISPLAA 182
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L NL+ L L TQV S L L+ L+ L +N + +SD + LA LSSL + L
Sbjct: 183 LTNLQTLSLGYTQV--SDLTPLANLSKLTILNAENSKVSD--ISPLASLSSLAEVYLREN 238
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
QI+D ++ L ++ L+ ++L IT+ Y
Sbjct: 239 QISD--VSPLANIPNLSIIELTDQIITNQPVYY 269
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 42/179 (23%)
Query: 274 GLTNLESL----NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG-----LRHLSGLT 324
G+T +E + NL + D + +++ L NL + T++G SG + ++GL
Sbjct: 85 GITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI----TELGLSGNPLKDVSAIAGLK 140
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI 384
+L+ ++L +T I+D + LAGL++L+ LNLD QITD ++ L +LT L L L ++
Sbjct: 141 SLKMLHLIYTDITD--VTSLAGLTNLQELNLDINQITD--ISPLAALTNLQTLSLGYTQV 196
Query: 385 TDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSL 443
+D L NL L I LN NS+++ + PL +L SL
Sbjct: 197 SD-----LTPLANLSKLTI---------------LNAENSKVS-----DISPLASLSSL 230
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 46/262 (17%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI 92
+Q + Q +N+ + D + + L L +DVTD + D +
Sbjct: 31 VQAAVIEQPTPINEIFTDPVVADNVKTL---LEKADVTDE----------VTQTDLDSIT 77
Query: 93 QIS--DGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL-DLERCTRIHGGLV 149
Q+S G+ + G+ LT+LS +T + + L NL K+ +L +
Sbjct: 78 QLSAKSAGITTIEGMQYLTNLSELE---LTDNQITDVSPLANLTKITELGLSGNPLKDVS 134
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD-SGIAYLKGLQ---- 204
+ GL L+ L++ + + +D+ L+GLTNL+ L + +++TD S +A L LQ
Sbjct: 135 AIAGLKSLKMLHLIYTDI---TDVTSLAGLTNLQELNLDINQITDISPLAALTNLQTLSL 191
Query: 205 ---------------KLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS 249
KLT+LN E V + + L++L SL + L Q+SD +
Sbjct: 192 GYTQVSDLTPLANLSKLTILNAENSKV--SDISPLASLSSLAEVYLRENQISD--VSPLA 247
Query: 250 KIGSLKVLNLGFNEITDECLVH 271
I +L ++ L IT++ + +
Sbjct: 248 NIPNLSIIELTDQIITNQPVYY 269
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 29/207 (14%)
Query: 261 FNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
NEI + +V N+++L L+ + DE V T L ++ +LS G + + +
Sbjct: 42 INEIFTDPVVA----DNVKTL-LEKADVTDE--VTQTDLDSIT--QLSAKSAGITTIEGM 92
Query: 321 SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
LTNL + L+ I+D S LA L+ + L L + D ++A+ L L L L
Sbjct: 93 QYLTNLSELELTDNQITDVS--PLANLTKITELGLSGNPLKD--VSAIAGLKSLKMLHLI 148
Query: 381 GARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKP 436
ITD + L NL+ L + +TD A LT L +L++ ++++ L P
Sbjct: 149 YTDITDVTS--LAGLTNLQELNLDINQITDISPLAALTNLQTLSLGYTQVS-----DLTP 201
Query: 437 LKNLRSLTL---ESCKVTANDIKRLQS 460
L NL LT+ E+ KV+ DI L S
Sbjct: 202 LANLSKLTILNAENSKVS--DISPLAS 226
>gi|85679295|gb|ABC72063.1| InlE [Listeria monocytogenes]
Length = 498
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 107/213 (50%), Gaps = 38/213 (17%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
LTNL L+++ +++TD ++ L L K+T L L G P L +SA+ L
Sbjct: 94 LTNLSELELTDNQITD--VSPLANLTKITELGLSGNP-----LKDVSAIAGL-------- 138
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
SLK+L+L + +ITD + L GLTNL+ LNLD I D + L
Sbjct: 139 -------------KSLKMLHLIYTDITD--VTSLAGLTNLQELNLDINQITD--ISPLAA 181
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L NL+ L L TQV S L L+ L+ L +N + +SD + LA LSSL + L
Sbjct: 182 LTNLQTLSLGYTQV--SDLTPLANLSKLTILNAENSKVSD--ISPLASLSSLAEVYLREN 237
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
QI+D ++ L ++ L+ ++L IT+ Y
Sbjct: 238 QISD--VSPLANIPNLSIIELTDQIITNQPVYY 268
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 42/179 (23%)
Query: 274 GLTNLESL----NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG-----LRHLSGLT 324
G+T +E + NL + D + +++ L NL + T++G SG + ++GL
Sbjct: 84 GITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI----TELGLSGNPLKDVSAIAGLK 139
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI 384
+L+ ++L +T I+D + LAGL++L+ LNLD QITD ++ L +LT L L L ++
Sbjct: 140 SLKMLHLIYTDITD--VTSLAGLTNLQELNLDINQITD--ISPLAALTNLQTLSLGYTQV 195
Query: 385 TDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSL 443
+D L NL L I LN NS+++ + PL +L SL
Sbjct: 196 SD-----LTPLANLSKLTI---------------LNAENSKVS-----DISPLASLSSL 229
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 46/262 (17%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI 92
+Q + Q +N+ + D + + L L +DVTD + D +
Sbjct: 30 VQAAVIEQPTPINEIFTDPVVADNVKTL---LEKADVTDE----------VTQTDLDSIT 76
Query: 93 QIS--DGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL-DLERCTRIHGGLV 149
Q+S G+ + G+ LT+LS +T + + L NL K+ +L +
Sbjct: 77 QLSAKSAGITTIEGMQYLTNLSELE---LTDNQITDVSPLANLTKITELGLSGNPLKDVS 133
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD-SGIAYLKGLQ---- 204
+ GL L+ L++ + + +D+ L+GLTNL+ L + +++TD S +A L LQ
Sbjct: 134 AIAGLKSLKMLHLIYTDI---TDVTSLAGLTNLQELNLDINQITDISPLAALTNLQTLSL 190
Query: 205 ---------------KLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS 249
KLT+LN E V + + L++L SL + L Q+SD +
Sbjct: 191 GYTQVSDLTPLANLSKLTILNAENSKV--SDISPLASLSSLAEVYLRENQISD--VSPLA 246
Query: 250 KIGSLKVLNLGFNEITDECLVH 271
I +L ++ L IT++ + +
Sbjct: 247 NIPNLSIIELTDQIITNQPVYY 268
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 29/207 (14%)
Query: 261 FNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
NEI + +V N+++L L+ + DE V T L ++ +LS G + + +
Sbjct: 41 INEIFTDPVVA----DNVKTL-LEKADVTDE--VTQTDLDSIT--QLSAKSAGITTIEGM 91
Query: 321 SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
LTNL + L+ I+D S LA L+ + L L + D ++A+ L L L L
Sbjct: 92 QYLTNLSELELTDNQITDVS--PLANLTKITELGLSGNPLKD--VSAIAGLKSLKMLHLI 147
Query: 381 GARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKP 436
ITD + L NL+ L + +TD A LT L +L++ ++++ L P
Sbjct: 148 YTDITDVTS--LAGLTNLQELNLDINQITDISPLAALTNLQTLSLGYTQVS-----DLTP 200
Query: 437 LKNLRSLTL---ESCKVTANDIKRLQS 460
L NL LT+ E+ KV+ DI L S
Sbjct: 201 LANLSKLTILNAENSKVS--DISPLAS 225
>gi|171910953|ref|ZP_02926423.1| probable G protein-coupled receptor LGR4 [Verrucomicrobium spinosum
DSM 4136]
Length = 400
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 116/244 (47%), Gaps = 16/244 (6%)
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCS-KVTDSGIAYLKGLQKLTLLNLE 212
L K+ESLNI C +D + PL L LK+L+ + + K++D+G+ L GL +L +
Sbjct: 147 LSKIESLNIIATKC-SDDWIAPLGKLKTLKTLKFTNNGKLSDAGLEKLAGLNQLEAFSFV 205
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDG----CEKFSKIGSLKVLNLGFNEITDEC 268
G + +L ++ + D+G C KF +L+ ++L + D
Sbjct: 206 GTGMQGHAYAKFEGWTALTRVSHRGSSIDDEGLTLLCAKFP---NLESISLAHAKCGDAG 262
Query: 269 LVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES 328
+ L LT L+ L L S LV++ + +L+ L+L D G+ + G+T L
Sbjct: 263 VAQLPKLTKLKGLELGSKNATPGSLVHVAKM-SLEYLQLGDGLDAPEGIAAIKGMTTLRR 321
Query: 329 INLS-FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDS 387
+ L+ + D L+ +AG+ L+SL L++ ++TD L L S + L L RI +
Sbjct: 322 LTLTNAKSLGDADLQAVAGIKGLESLELNSVELTDERLPLLKSFSHLKEL-----RIVNR 376
Query: 388 GAAY 391
Y
Sbjct: 377 PKGY 380
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 10/240 (4%)
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN-EITDECLVHLK 273
P AA + + L + LN+ + SDD K+ +LK L N +++D L L
Sbjct: 135 PYDAAFFEHVGQLSKIESLNIIATKCSDDWIAPLGKLKTLKTLKFTNNGKLSDAGLEKLA 194
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL-SGLTNLESINLS 332
GL LE+ + G+ G L + + + GL L + NLESI+L+
Sbjct: 195 GLNQLEAFSFVGTGMQGHAYAKFEGWTALTRVSHRGSSIDDEGLTLLCAKFPNLESISLA 254
Query: 333 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 392
D + +L L+ LK L L ++ T L + ++ L +L L G A +
Sbjct: 255 HAKCGDAGVAQLPKLTKLKGLELGSKNATPGSLVHVAKMS-LEYLQLGDGLDAPEGIAAI 313
Query: 393 RNFKNLRSLEICGG---GLTD----AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
+ LR L + G D AG+ GL SL +++ +T L LK +L+ L +
Sbjct: 314 KGMTTLRRLTLTNAKSLGDADLQAVAGIKGLESLELNSVELTDERLPLLKSFSHLKELRI 373
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 7/186 (3%)
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDT-QVGSSGLRHLSGLTNLESI 329
H+ L+ +ESLN+ + D+ + L L LK L+ ++ ++ +GL L+GL LE+
Sbjct: 143 HVGQLSKIESLNIIATKCSDDWIAPLGKLKTLKTLKFTNNGKLSDAGLEKLAGLNQLEAF 202
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL-TSLTGLTHLDLFGARITDSG 388
+ TG+ + K G ++L ++ I D GL L L + L A+ D+G
Sbjct: 203 SFVGTGMQGHAYAKFEGWTALTRVSHRGSSIDDEGLTLLCAKFPNLESISLAHAKCGDAG 262
Query: 389 AAYLRNFKNLRSLEI-----CGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSL 443
A L L+ LE+ G L L L + + G+ +K + LR L
Sbjct: 263 VAQLPKLTKLKGLELGSKNATPGSLVHVAKMSLEYLQLGDGLDAPEGIAAIKGMTTLRRL 322
Query: 444 TLESCK 449
TL + K
Sbjct: 323 TLTNAK 328
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 27/260 (10%)
Query: 55 QGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR 114
Q S + S+++ + +D + L L++L F ++SD GLE L GL+ L + SF
Sbjct: 146 QLSKIESLNIIATKCSDDWIAPLGKLKTLKTLKFTNNGKLSDAGLEKLAGLNQLEAFSF- 204
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
+ F G L ++ G ++ +GL L C
Sbjct: 205 VGTGMQGHAYAKFEGWTALTRVSH------RGSSIDDEGLTLL-------C--------- 242
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
+ NL+S+ ++ +K D+G+A L L KL L L T L ++ + SL YL
Sbjct: 243 --AKFPNLESISLAHAKCGDAGVAQLPKLTKLKGLELGSKNATPGSLVHVAKM-SLEYLQ 299
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
L + +G + +L+ L L + D L + G+ LESL L+S + DE L
Sbjct: 300 LGDGLDAPEGIAAIKGMTTLRRLTLTNAKSLGDADLQAVAGIKGLESLELNSVELTDERL 359
Query: 294 VNLTGLCNLKCLELSDTQVG 313
L +LK L + + G
Sbjct: 360 PLLKSFSHLKELRIVNRPKG 379
>gi|343418611|emb|CCD19670.1| hypothetical protein, conserved in T. vivax [Trypanosoma vivax
Y486]
Length = 840
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 163/366 (44%), Gaps = 37/366 (10%)
Query: 132 NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCS 190
+L LDL CT I GL L GL L+ L + W C+ D+ ++ L+ L+ L + SC+
Sbjct: 3 SLEMLDLNDCTGIVRGLHVLCGLTTLQELCL-WQLCVDDALLRDLTCHERLRELSLNSCT 61
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSK 250
++TD ++ L ++ L +LNL C L L L +L L L + D +
Sbjct: 62 RITD--VSPLARMRSLEILNLNDCTGIVRGLHVLCGLTTLQELCLANVNVDDAFVRDLTC 119
Query: 251 IGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSD 309
L+ L+L ITD + L + +LE LNL+ C GL L GL L+ L L
Sbjct: 120 HERLRRLSLNSCTRITD--VSPLARMRSLEMLNLNDCTGIVRGLHELCGLTTLQELYLPK 177
Query: 310 TQVGSSGLRHLSGLTNLESINL-SFTGISDGS----------------------LRKLAG 346
V + LR L+ L ++L S T I+D S L +L G
Sbjct: 178 VYVDDAFLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLEMLDLNGCIGIVRGLHELCG 237
Query: 347 LSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA-RITD-SGAAYLRNFKNLRSLEIC 404
L++L+ L L + + L LT L L L RITD S A +R+ + L L C
Sbjct: 238 LTTLQELYLWQLCVDNAFLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLEML-DLNDC 296
Query: 405 GG---GLTD-AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQS 460
G GL + GLT L L + + A LR L + LR L+L SC + +
Sbjct: 297 TGIVRGLHELCGLTTLQELYLWQLCVDDAFLRDLTCHERLRRLSLNSCTRITDVSPLARM 356
Query: 461 RDLPNL 466
R L NL
Sbjct: 357 RSLENL 362
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 128/444 (28%), Positives = 193/444 (43%), Gaps = 44/444 (9%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTD-SGLIHLKDCSNLQSLDFNF 90
LQ+LCL Q + D+ + LS++ S + +TD S L ++ +L+ L+ N
Sbjct: 27 TLQELCLWQLCVDDALLRDLTCHERLRELSLN-SCTRITDVSPLARMR---SLEILNLND 82
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN 150
C I GL L GL+ L L N A ++ L +L L CTRI +
Sbjct: 83 CTGIV-RGLHVLCGLTTLQELCLANVNVDDA-FVRDLTCHERLRRLSLNSCTRI-TDVSP 139
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
L + LE LN+ C I + L GLT L+ L + V D+ + L ++L L+
Sbjct: 140 LARMRSLEMLNLNDCTGIVRG-LHELCGLTTLQELYLPKVYVDDAFLRDLTCHERLRRLS 198
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
L C + L+ + SL L+LN C G + + +L+ L L + + L
Sbjct: 199 LNSCTRITD-VSPLARMRSLEMLDLNGCIGIVRGLHELCGLTTLQELYLWQLCVDNAFLR 257
Query: 271 HLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
L L L+L+SC I D L + +L+ L+L+D GL L GLT L+ +
Sbjct: 258 DLTCHERLRRLSLNSCTRITDVS--PLARMRSLEMLDLNDCTGIVRGLHELCGLTTLQEL 315
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD-SG 388
L + D LR L L+ L+L++ RITD S
Sbjct: 316 YLWQLCVDDAFLRDLTCHERLRRLSLNS-----------------------CTRITDVSP 352
Query: 389 AAYLRNFKNLRSLEICGG---GL-TDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 444
A +R+ +NL L C G GL GLT L L + + A +R L + LR L+
Sbjct: 353 LARMRSLENL-DLNDCTGIVRGLHVLCGLTTLQELCLWQLCVDDAFVRDLTCHERLRRLS 411
Query: 445 LESCKVTAN--DIKRLQSRDLPNL 466
L SC N + R++S ++ NL
Sbjct: 412 LNSCTRITNVSPLARMRSLEILNL 435
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 189/399 (47%), Gaps = 26/399 (6%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAIT--AQGMKAFAGLINLVKLDL 138
L+ L N C +I++ L+ + SL N T +G+ GL L +L L
Sbjct: 405 ERLRRLSLNSCTRITNVS-----PLARMRSLEILNLNGCTGIVRGLHVLCGLTTLQELYL 459
Query: 139 ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGI 197
+ L +L +L L++ C IT D+ PL+ + +L+ L ++ C+ + G+
Sbjct: 460 WQLCVDDAFLRDLTCHERLRRLSLNSCTRIT--DVSPLARMRSLEMLDLNGCTGIV-RGL 516
Query: 198 AYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
L GL L L L PV A L L+ L L+LN C D +++ SL++L
Sbjct: 517 HVLCGLTTLQELCLAEVPVNDALLRDLTCHERLRELSLNSCTRITDV-SPLARMRSLEML 575
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL-SDTQVGSSG 316
+L L L GLT L+ L L + + L +LT L+ L L S T++ +
Sbjct: 576 DLNDCTGIVRGLHELCGLTTLQELCLWQLCVDNAFLRDLTCHERLRRLSLNSCTRI--TD 633
Query: 317 LRHLSGLTNLESINLS-FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLT 375
+ L+ + +LE ++L+ GI G L +L GL++L+ L L + + L LT L
Sbjct: 634 VSPLARMRSLEMLDLNGCIGIVRG-LHELCGLTTLQELYLWQLCVDNAFLRDLTCHERLR 692
Query: 376 HLDLFGA-RITD-SGAAYLRNFKNLRSLEICGG---GLTD-AGLTGLVSLNVSNSRITSA 429
L L RITD S A +R+ + L L C G GL + GLT L L + + A
Sbjct: 693 RLSLNSCTRITDVSPLARMRSLEML-DLNDCTGIVRGLHELCGLTTLQELYLWQLCVDDA 751
Query: 430 GLRHLKPLKNLRSLTLESC-KVT-ANDIKRLQSRDLPNL 466
LR L + LR L+L SC ++T + + R++S ++ +L
Sbjct: 752 FLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLEMLDL 790
>gi|157111144|ref|XP_001651407.1| leucine-rich transmembrane proteins [Aedes aegypti]
gi|108878510|gb|EAT42735.1| AAEL005762-PA [Aedes aegypti]
Length = 596
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 152/358 (42%), Gaps = 36/358 (10%)
Query: 63 DLSGSDVTDSGLIHLKDCS-----NLQSLDF--NFCIQI---SDGGLEHLRGLSNLTSLS 112
DL ++TDS L +L+D + NL+ L+F N I SD LE NL +L
Sbjct: 85 DLHTLEITDSRLNNLQDFALNGLRNLEVLNFSRNNLTTIKSWSDHDLE------NLQTLD 138
Query: 113 FRRN--NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN------LKGLMKLESLNIKW 164
RRN I +Q K + NL KL+L G L+ K + L+ LN+
Sbjct: 139 LRRNLVKGINSQSFKRYP---NLNKLNLA------GNLIEVIPESTFKVVPNLKYLNLG- 188
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
N +T + L GL L ++++ G L L L+G +T D L
Sbjct: 189 RNLLTSIEETTLKGLNKLTHAFFHHNQISFVDFFAFIGNSHLKTLQLQGNQITIFETDLL 248
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
S L L +LN++ QL D F K L+VL+L +N I KGL +LE N
Sbjct: 249 SNLPRLTFLNISYNQLEDIADHTFKKNADLRVLDLSYNRIEKFREDGFKGLVSLEVFNAS 308
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
+ +++ L+LS ++ + LE +NLS IS+
Sbjct: 309 HNHLTQLNKYIFKDFSSVRILDLSGNRLTYIDNKLFEYSPRLEMLNLSRNSISEIEPNIF 368
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
L +L+L Q+++ A L + L+HL++ + A+ L +F +R L+
Sbjct: 369 EDSRKLLTLDLSHNQLSED--AFLWPIVSLSHLNMSYNQFQRLNASVLESFAQVRLLK 424
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 105/258 (40%), Gaps = 30/258 (11%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC------LDSLSAL----- 227
T+L +L+I+ S++ + L GL+ L +LN +T L++L L
Sbjct: 83 FTDLHTLEITDSRLNNLQDFALNGLRNLEVLNFSRNNLTTIKSWSDHDLENLQTLDLRRN 142
Query: 228 ------GSLF--YLNLNRCQLSDDGCE-----KFSKIGSLKVLNLGFNEITDECLVHLKG 274
F Y NLN+ L+ + E F + +LK LNLG N +T LKG
Sbjct: 143 LVKGINSQSFKRYPNLNKLNLAGNLIEVIPESTFKVVPNLKYLNLGRNLLTSIEETTLKG 202
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT 334
L L I G +LK L+L Q+ LS L L +N+S+
Sbjct: 203 LNKLTHAFFHHNQISFVDFFAFIGNSHLKTLQLQGNQITIFETDLLSNLPRLTFLNISYN 262
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA---RITDSGAAY 391
+ D + + L+ L+L +I GL L++F A +T
Sbjct: 263 QLEDIADHTFKKNADLRVLDLSYNRIEKFREDG---FKGLVSLEVFNASHNHLTQLNKYI 319
Query: 392 LRNFKNLRSLEICGGGLT 409
++F ++R L++ G LT
Sbjct: 320 FKDFSSVRILDLSGNRLT 337
>gi|452824610|gb|EME31612.1| F-box and leucine-rich repeat protein GRR1 [Galdieria sulphuraria]
Length = 740
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 143/283 (50%), Gaps = 23/283 (8%)
Query: 58 SLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
SL +DLSG S +++ G+ L +L++L + C + + L ++R + L SLS
Sbjct: 121 SLKLLDLSGCSQLSNVGMEALSYFRSLETLVLDHCSSLGNISLSYIRDIPCLKSLSIACC 180
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+ I+ G++ L L L+L C+RI L+++ L L+ L ++ C + + ++
Sbjct: 181 DKISGSGLEQLFYLKRLEFLNLSSCSRITSDALLHIGSLKNLKHLKLRNCARVDNRALEH 240
Query: 176 LSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY-- 232
+ LT+L++L++ C K+ D+G+ YL+ ++ L L G ++A D +++L +F
Sbjct: 241 IGNLTSLETLELYECVKIDDNGLKYLQKCSQIRHLCLSGTCISA---DGIASLADIFMPH 297
Query: 233 ---LNLNRC------QLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLK-GLTNLESL 281
L+L RC Q S K SK ++K L L + + + DE L + LESL
Sbjct: 298 LENLHLTRCSNLVGSQFS-VSLRKLSK--NMKRLQLRYLHCVDDEVLQAISDSFPQLESL 354
Query: 282 NLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL 323
NL C + D G+ L L +L L+L T V G+ + L
Sbjct: 355 NLTDCRYVTDRGISWLEKLSSLSMLKLGGTSVSDYGILRIKDL 397
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 190/418 (45%), Gaps = 60/418 (14%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA 128
V + L H+ + ++L++L+ C++I D GL++L+ S + L I+A G+ + A
Sbjct: 233 VDNRALEHIGNLTSLETLELYECVKIDDNGLKYLQKCSQIRHLCLS-GTCISADGIASLA 291
Query: 129 GLI--NLVKLDLERCTRIHGGL--VNLKGLMK---------------------------L 157
+ +L L L RC+ + G V+L+ L K L
Sbjct: 292 DIFMPHLENLHLTRCSNLVGSQFSVSLRKLSKNMKRLQLRYLHCVDDEVLQAISDSFPQL 351
Query: 158 ESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKG-LQKLTLLNLEGCPV 216
ESLN+ C +TD + L L++L L++ + V+D GI +K L++++ L++ C +
Sbjct: 352 ESLNLTDCRYVTDRGISWLEKLSSLSMLKLGGTSVSDYGILRIKDLLKRISELDISSCIL 411
Query: 217 TAACLDS--LSALGSLFYLNL-NRCQLSDDGC----EKFSKIGSLKVL------NLGFNE 263
+ + S L+ + L L++ N QL+ + + F K LK L LG +
Sbjct: 412 CSEKITSHILNNVEHLKVLDISNNPQLTKNSWSLSYQNFLKRLPLKTLVIEEGGTLGKDF 471
Query: 264 ITD-ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSS-GLRHLS 321
+T CL LE+L L C I + T L+ L+LS +V L
Sbjct: 472 LTSVACL-----FPKLETLLLSKCRIDGDDFKAFTDFGCLRHLKLSHCEVSKPFKFDFLI 526
Query: 322 GLTN-LESINLSFTGISDGSLRKLAG-LSSLKSLNL-DARQITDTGLAALTSLTGLTHLD 378
L N L+ +NLS L + G L +L+SLNL + R +T+ L +L SL+ L++L+
Sbjct: 527 SLKNALQHLNLSSCHFVTDDLCTIIGELINLESLNLKNCRNVTNRALLSLYSLSHLSYLN 586
Query: 379 LFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKP 436
L G ++ L +NL S+ + +T+ TG + + + R L P
Sbjct: 587 LRGCPLSQEAVWLLE--RNLNSISVLKYDMTNC--TGFYQITLGLQQHYYYYSRGLSP 640
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 278 LESLNLDSC-GIGDEGLVNLTG-----------LCNLKCLELSD-TQVGSSGLRHLSGLT 324
LE+L L C + DEGL LT C+LK L+LS +Q+ + G+ LS
Sbjct: 86 LEALVLSFCVHLTDEGLYKLTSSQEDLHKDSPLTCSLKLLDLSGCSQLSNVGMEALSYFR 145
Query: 325 NLESINLSF-TGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFG- 381
+LE++ L + + + SL + + LKSL++ +I+ +GL L L L L+L
Sbjct: 146 SLETLVLDHCSSLGNISLSYIRDIPCLKSLSIACCDKISGSGLEQLFYLKRLEFLNLSSC 205
Query: 382 ARITDSGAAYLRNFKNLRSLEICGGGLTD-------AGLTGLVSLNVSNS-RITSAGLRH 433
+RIT ++ + KNL+ L++ D LT L +L + +I GL++
Sbjct: 206 SRITSDALLHIGSLKNLKHLKLRNCARVDNRALEHIGNLTSLETLELYECVKIDDNGLKY 265
Query: 434 LKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
L+ +R L L ++A+ I L +P+L
Sbjct: 266 LQKCSQIRHLCLSGTCISADGIASLADIFMPHL 298
>gi|242074072|ref|XP_002446972.1| hypothetical protein SORBIDRAFT_06g026090 [Sorghum bicolor]
gi|241938155|gb|EES11300.1| hypothetical protein SORBIDRAFT_06g026090 [Sorghum bicolor]
Length = 1164
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 148/358 (41%), Gaps = 20/358 (5%)
Query: 55 QGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLD-----FNFCIQISDGGLEHLRGLSNLT 109
Q ++LL + L G+ + + + C LQ LD F + S GGL LR
Sbjct: 372 QLTALLELRLGGNAFSGAVPAEIGRCGALQVLDLEDNHFTGDVPSSLGGLPRLRE----- 426
Query: 110 SLSFRRNNAITAQGMKAFAGLINLVKLDLER---CTRIHGGLVNLKGLMKLESLNIKWCN 166
++ N + Q +F L L L ++R R+ G L L L L+ N
Sbjct: 427 --AYLGGNTFSGQIPASFGNLSWLEALSIQRNRLTGRLSGELFRLGNLTFLDLSE----N 480
Query: 167 CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLS 225
+T + L L+SL +S + + + LQ L +L+L G ++ L
Sbjct: 481 NLTGEIPPAIGNLLALQSLNLSGNAFSGHIPTTIGNLQNLRVLDLSGQKNLSGNVPAELF 540
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
L L Y++ S D E FS + SL+ LNL N T L +L+ L+
Sbjct: 541 GLPQLQYVSFADNSFSGDVPEGFSSLWSLRNLNLSGNSFTGSIPATYGYLPSLQVLSASH 600
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
I E L NL LELS Q+ S LS L LE ++LS+ +S +++
Sbjct: 601 NHISGELPAELANCSNLTVLELSGNQLTGSIPSDLSRLDELEELDLSYNQLSGKIPPEIS 660
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
SSL L LD I A+L +L+ L LDL +T S A L L S +
Sbjct: 661 NCSSLALLKLDDNHIGGDIPASLANLSKLQTLDLSSNNLTGSIPASLAQIPGLLSFNV 718
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 83/204 (40%)
Query: 180 TNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ 239
+L+ + + +K+ +L G LTLL+L G T ++ L +L L L
Sbjct: 326 ADLQVVDLGGNKLAGPFPTWLAGAGGLTLLDLSGNAFTGELPPAVGQLTALLELRLGGNA 385
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGL 299
S + + G+L+VL+L N T + L GL L L + + L
Sbjct: 386 FSGAVPAEIGRCGALQVLDLEDNHFTGDVPSSLGGLPRLREAYLGGNTFSGQIPASFGNL 445
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 359
L+ L + ++ L L NL ++LS ++ + L +L+SLNL
Sbjct: 446 SWLEALSIQRNRLTGRLSGELFRLGNLTFLDLSENNLTGEIPPAIGNLLALQSLNLSGNA 505
Query: 360 ITDTGLAALTSLTGLTHLDLFGAR 383
+ + +L L LDL G +
Sbjct: 506 FSGHIPTTIGNLQNLRVLDLSGQK 529
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 7/162 (4%)
Query: 225 SALGSLFYL---NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTNLES 280
ALGSL YL +L LS +++ SL+ + L N ++ L LTNL++
Sbjct: 102 PALGSLPYLERLSLRSNDLSGAIPASLARVTSLRAVFLQSNSLSGPIPQSFLANLTNLDT 161
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLT-NLESINLSFTGISDG 339
D G G V ++ +LK L+LS + ++S T NL+ +NLSF +
Sbjct: 162 F--DVSGNLLSGPVPVSFPPSLKYLDLSSNAFSGTIPANISASTANLQFLNLSFNRLRGT 219
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG 381
L L +L L LD + T AAL + + L HL L G
Sbjct: 220 VPASLGNLQNLHYLWLDGNLLEGTIPAALANCSALLHLSLQG 261
>gi|357511817|ref|XP_003626197.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355501212|gb|AES82415.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 605
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 197/402 (49%), Gaps = 28/402 (6%)
Query: 69 VTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEHLRGLS---NLTSLSFRRNNAITAQGM 124
VTD GL + CS L+ L +C++ISD G++ L N +S+ + +T + +
Sbjct: 197 VTDIGLAKIAVGCSKLEKLSLKWCLEISDLGIDLLSKKCFDLNFLDVSYLK---VTNESL 253
Query: 125 KAFAGLINLVKLDLERCTRI-HGGLVNL-KGLMKLESLNIKWCNCITDSD-MKPLSGLTN 181
++ A L+ L + C + GL L KG L+++++ CNC++ S + +SG
Sbjct: 254 RSIASLLKLEVFIMVGCYLVDDAGLQFLEKGCPLLKAIDVSRCNCVSPSGLLSVISGHEG 313
Query: 182 LKSLQI-SC-SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL-SALGSLFYLNLNRC 238
L+ + C S+++ LK L+ L+++ ++G V+ L + S SL L L++C
Sbjct: 314 LEQINAGHCLSELSAPLTNGLKNLKHLSVIRIDGVRVSDFILQIIGSNCKSLVELGLSKC 373
Query: 239 -QLSDDGCEKFSKIGSLKVLNLGFNE-ITDECLVHLK-GLTNLESLNLDSCGIGDE-GLV 294
+++ G + +L L+L +TD + + NL L L+SC + E GL
Sbjct: 374 IGVTNMGIMQVVGCCNLTTLDLTCCRFVTDAAISTIANSCPNLACLKLESCDMVTEIGLY 433
Query: 295 NLTGLC-NLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLA-GLSSL 350
+ C L+ L+L+D V L++LS + L + L T ISD L +A L
Sbjct: 434 QIGSSCLMLEELDLTDCSGVNDIALKYLSRCSKLVRLKLGLCTNISDIGLAHIACNCPKL 493
Query: 351 KSLNL-DARQITDTGLAALTS-LTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICGGG 407
L+L +I D GLAALT+ L L+L + RITD+G + N L E+ G
Sbjct: 494 TELDLYRCVRIGDDGLAALTTGCNKLAMLNLAYCNRITDAGLKCISNLGELSDFEL--RG 551
Query: 408 LTDAGLTGLVSLNVSNSRITSAGLRHLKPLKN--LRSLTLES 447
L++ G+ ++ VS R+ + L+H + L + R+L S
Sbjct: 552 LSNITSIGIKAVAVSCKRLANLDLKHCEKLDDTGFRALAFYS 593
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 85/178 (47%), Gaps = 7/178 (3%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSD-VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEH 101
V D + IA+ +L + L D VT+ GL + C L+ LD C ++D L++
Sbjct: 401 VTDAAISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKY 460
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRI-HGGLVNLK-GLMKLE 158
L S L L I+ G+ A L +LDL RC RI GL L G KL
Sbjct: 461 LSRCSKLVRLKLGLCTNISDIGLAHIACNCPKLTELDLYRCVRIGDDGLAALTTGCNKLA 520
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGI-AYLKGLQKLTLLNLEGC 214
LN+ +CN ITD+ +K +S L L ++ S +T GI A ++L L+L+ C
Sbjct: 521 MLNLAYCNRITDAGLKCISNLGELSDFELRGLSNITSIGIKAVAVSCKRLANLDLKHC 578
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 20 LTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGS-DVTDSGLIHL 77
+ +++L+ C+ L L LG ++D + IA L +DL + D GL L
Sbjct: 453 VNDIALKYLSRCSKLVRLKLGLCTNISDIGLAHIACNCPKLTELDLYRCVRIGDDGLAAL 512
Query: 78 KD-CSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVK 135
C+ L L+ +C +I+D GL+ + L L+ R + IT+ G+KA A L
Sbjct: 513 TTGCNKLAMLNLAYCNRITDAGLKCISNLGELSDFELRGLSNITSIGIKAVAVSCKRLAN 572
Query: 136 LDLERCTRI 144
LDL+ C ++
Sbjct: 573 LDLKHCEKL 581
>gi|363540089|ref|YP_004894711.1| mg660 gene product [Megavirus chiliensis]
gi|350611254|gb|AEQ32698.1| putative F-box/LRR-repeat protein [Megavirus chiliensis]
Length = 559
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 163/373 (43%), Gaps = 81/373 (21%)
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC 165
N+ S++ R N IT + ++ G+ K++L C I G K L E++N+ C
Sbjct: 65 QNIKSINLSRTN-ITDKELQFLCGI---TKINLYCCKNITGS--GFKYLQLAENINLSGC 118
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYL--------------KGLQKLTLLNL 211
N I S+++ LS N+ + +S + + D I YL + K+ ++L
Sbjct: 119 NQIIGSELRYLS---NIVKINLSMTNIDDQAIEYLVFGQKIDSNKEILIQSQTKIKFIDL 175
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH 271
+T + LS + + +N+N C+ +T CL +
Sbjct: 176 SFTKITNTTISHLSNVKT---ININSCEF-----------------------VTSSCLQY 209
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
L +T++ +N + IGD N+ L +K L L+D + + L ++ + +LE N
Sbjct: 210 LHNVTHI-YMNTYNVLIGD----NIKYLNKIKLLVLNDHTLSDNQLEYIQNIEHLEIYNA 264
Query: 332 SFTGISDGSLRKLAGLSSL---KSLNLDARQITDTGLAAL-----------TSLTGLTHL 377
S I+ L+KL L L S N+D T + +SL L HL
Sbjct: 265 S-DKITHQGLQKLNNLKILSLRHSYNIDTISFIPTNKIRILDLKNCHQVTDSSLQNLPHL 323
Query: 378 DLFG----ARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGLVSLNVSN----SRITS 428
+ +ITD+G L+N +++ ++ + G +TD GL + S N N +IT
Sbjct: 324 EKINLSWCYKITDNG---LKNLQHVTNINLSGCHRITDNGLMHINSANRINISYCIKITD 380
Query: 429 AGLRHLKPLKNLR 441
GL+HL+ +KN++
Sbjct: 381 DGLKHLQNVKNIK 393
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 208/488 (42%), Gaps = 111/488 (22%)
Query: 7 SQQIFNELVYSRCLTEV--SLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDL 64
+Q I +EL Y + ++ S+ D A++ L GQ N + + I SQ + + +DL
Sbjct: 119 NQIIGSELRYLSNIVKINLSMTNIDDQAIEYLVFGQKIDSNKEIL--IQSQ-TKIKFIDL 175
Query: 65 SGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
S + +T++ + HL SN+++++ N C ++ L++L N+T + N + +
Sbjct: 176 SFTKITNTTISHL---SNVKTININSCEFVTSSCLQYLH---NVTHIYMNTYNVLIGDNI 229
Query: 125 KAFAGLINLVKLD-------LERCTRI-------------HGGLVNLKGLM--------- 155
K + LV D LE I H GL L L
Sbjct: 230 KYLNKIKLLVLNDHTLSDNQLEYIQNIEHLEIYNASDKITHQGLQKLNNLKILSLRHSYN 289
Query: 156 ----------KLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQ 204
K+ L++K C+ +TDS L L +L+ + +S C K+TD+G LK LQ
Sbjct: 290 IDTISFIPTNKIRILDLKNCHQVTDS---SLQNLPHLEKINLSWCYKITDNG---LKNLQ 343
Query: 205 KLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNE 263
+T +NL GC + L + S +N++ C +++DDG + + ++K LG++
Sbjct: 344 HVTNINLSGCHRITD--NGLMHINSANRINISYCIKITDDGLKHLQNVKNIK---LGYHS 398
Query: 264 ITDECLV-----------HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQV 312
+D ++ ++K + N + L D IG L+N L L C ++D
Sbjct: 399 TSDIYMIEYFEYDFSKEKYIKEIKNTKQLITD---IGLSYLINTQSLSLLYCENITD--- 452
Query: 313 GSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT 372
GL++LS + ++ SIN I G L LS + +NL ++ + L L +
Sbjct: 453 --DGLQYLSKIKSI-SINNCPKIIGIG----LKYLSDCQKINLSNVRLCKSSLKYLNLFS 505
Query: 373 GLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLR 432
+ TD YL K ++ L+G ++IT GL+
Sbjct: 506 KIK----INNNFTDDDLKYLYRAKKIK-------------LSGF-------NKITKNGLK 541
Query: 433 HLKPLKNL 440
HL + L
Sbjct: 542 HLHQVDKL 549
>gi|291391263|ref|XP_002712147.1| PREDICTED: F-box and leucine-rich repeat protein 13 [Oryctolagus
cuniculus]
Length = 739
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 217/482 (45%), Gaps = 68/482 (14%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHL-KDCSNLQSLDFNFC 91
LQ+L + + D+ M I+ +L ++LS + +T+ + L + NLQ+L +C
Sbjct: 251 LQELNVSDCSTLTDELMRYISEGCPGVLYLNLSNTTITNRTMRLLPRHFYNLQNLSLAYC 310
Query: 92 IQISDGGLEHL---RGLSNLTSLSFRRNNAITAQGMKAFA----GLINLVKLDL----ER 140
+ +D GL++L G L L I+ QG K A G+++L D+ +
Sbjct: 311 RKFTDKGLQYLSLGNGCHKLICLDLSGCTQISVQGFKNIANSCSGIMHLTINDMPTLTDN 370
Query: 141 CTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK-VTDSGIAY 199
C + LV + + S+ I+D K L+ NL+ ++ +K +TD+ +
Sbjct: 371 CVK---ALV--EKCPSITSVTFIGSPHISDCAFKALTA-CNLRKIRFEGNKRITDACFKF 424
Query: 200 L-KGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
+ K + + + C +T + L SL+ L L LNL C +IG + +
Sbjct: 425 IDKNYPNINHIYMSDCKGITDSSLKSLATLKQLTVLNLANC----------GRIGDMGIK 474
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLC-NLKCLELSDTQ-VGS 314
+ ++ L LNL +C +GD+ ++ L+ C NL L L + + +
Sbjct: 475 HFLDGPVSQR----------LRELNLSNCVHLGDDSVLRLSERCPNLNYLSLRNCEHLTD 524
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAAL-TSLT 372
G+ ++ + +L S++LS T IS+ L L+ LK L+L D +ITD G+ A S
Sbjct: 525 QGIENIVNILSLVSVDLSGTIISNEGLMVLSRHKKLKELSLSDCGKITDVGIQAFCKSSR 584
Query: 373 GLTHLDL-FGARITDSGAAYLRNF-KNLRSLEICG-GGLTDAGLTGLVS-------LNVS 422
L HLD+ + +++D L + NL SL + G +TDA + L + L+VS
Sbjct: 585 TLEHLDVSYCPQLSDDTIRALAIYCVNLTSLSVAGCPKITDAAMEMLSAKCHYLHILDVS 644
Query: 423 NSRITS--------AGLRHLKPLKNL--RSLTLESCKVTANDIKRLQS--RDLPNLVSFR 470
+ + G R L+ LK L R ++ E+ K A ++R + D P +
Sbjct: 645 GCVLLTDQILADLRMGCRQLRSLKMLYCRLISREAAKKMAAAVQRQEHSCNDPPRWFGYD 704
Query: 471 PE 472
E
Sbjct: 705 YE 706
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 149/355 (41%), Gaps = 69/355 (19%)
Query: 131 INLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS------------- 177
+N+++L+ C L ++ L+ LN+ C+ +TD M+ +S
Sbjct: 225 LNVLRLNFRGCILRPRTLRSIGHCRNLQELNVSDCSTLTDELMRYISEGCPGVLYLNLSN 284
Query: 178 -------------GLTNLKSLQIS-CSKVTDSGIAYLK---GLQKLTLLNLEGC-PVTAA 219
NL++L ++ C K TD G+ YL G KL L+L GC ++
Sbjct: 285 TTITNRTMRLLPRHFYNLQNLSLAYCRKFTDKGLQYLSLGNGCHKLICLDLSGCTQISVQ 344
Query: 220 CLDSLS-ALGSLFYLNLNRCQLSDDGCEK-----------FSKIGSLKVLNLGFN----- 262
+++ + + +L +N D C K + IGS + + F
Sbjct: 345 GFKNIANSCSGIMHLTINDMPTLTDNCVKALVEKCPSITSVTFIGSPHISDCAFKALTAC 404
Query: 263 -----------EITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD 309
ITD C + K N+ + + C GI D L +L L L L L++
Sbjct: 405 NLRKIRFEGNKRITDACFKFIDKNYPNINHIYMSDCKGITDSSLKSLATLKQLTVLNLAN 464
Query: 310 T-QVGSSGLRH-LSGLTN--LESINLS-FTGISDGSLRKLAG-LSSLKSLNL-DARQITD 362
++G G++H L G + L +NLS + D S+ +L+ +L L+L + +TD
Sbjct: 465 CGRIGDMGIKHFLDGPVSQRLRELNLSNCVHLGDDSVLRLSERCPNLNYLSLRNCEHLTD 524
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGLTGL 416
G+ + ++ L +DL G I++ G L K L+ L + G +TD G+
Sbjct: 525 QGIENIVNILSLVSVDLSGTIISNEGLMVLSRHKKLKELSLSDCGKITDVGIQAF 579
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 140/341 (41%), Gaps = 82/341 (24%)
Query: 21 TEVSLEAFRDCA-----LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGS-DVTDSGL 74
T++S++ F++ A + L + P + D + + + S+ SV GS ++D
Sbjct: 339 TQISVQGFKNIANSCSGIMHLTINDMPTLTDNCVKALVEKCPSITSVTFIGSPHISDCAF 398
Query: 75 IHLKDCSNLQSLDF----------------NF----------CIQISDGGLEHLRGLSNL 108
L C NL+ + F N+ C I+D L+ L L L
Sbjct: 399 KALTAC-NLRKIRFEGNKRITDACFKFIDKNYPNINHIYMSDCKGITDSSLKSLATLKQL 457
Query: 109 TSLSFRRNNAITAQGMKAF-----------AGLINLVKLD-------LERCTRIH----- 145
T L+ I G+K F L N V L ERC ++
Sbjct: 458 TVLNLANCGRIGDMGIKHFLDGPVSQRLRELNLSNCVHLGDDSVLRLSERCPNLNYLSLR 517
Query: 146 -------GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGI 197
G+ N+ ++ L S+++ I++ + LS LK L +S C K+TD GI
Sbjct: 518 NCEHLTDQGIENIVNILSLVSVDLSG-TIISNEGLMVLSRHKKLKELSLSDCGKITDVGI 576
Query: 198 -AYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS------- 249
A+ K + L L++ CP + D++ AL +++ +NL LS GC K +
Sbjct: 577 QAFCKSSRTLEHLDVSYCPQLSD--DTIRAL-AIYCVNLT--SLSVAGCPKITDAAMEML 631
Query: 250 --KIGSLKVLNL-GFNEITDECLVHLK-GLTNLESLNLDSC 286
K L +L++ G +TD+ L L+ G L SL + C
Sbjct: 632 SAKCHYLHILDVSGCVLLTDQILADLRMGCRQLRSLKMLYC 672
>gi|301088808|ref|XP_002894796.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108394|gb|EEY66446.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 825
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 189/443 (42%), Gaps = 91/443 (20%)
Query: 34 QDLCLGQYPGVNDKWMDVIASQGSS-----LLSVDLSGSDVTDSGLIHLKDCSNLQSLDF 88
Q++ L + V+++W+ IAS ++ ++ L+G+ +TDSG++HL +L SLD
Sbjct: 34 QEVDLRNFTCVSNEWLFAIASHPAASGSGTFRTLILAGTSITDSGIVHLSKLKSLTSLDV 93
Query: 89 NFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGG 147
+ C ++D GL + R LS+L +L ++ A L N+ K C R+H
Sbjct: 94 SGCHALTDAGLNTIRRQLSSLQTLHLDECYHFSS------AVLCNVWK----DCKRLH-- 141
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPL-----SGLTNLKSLQI-SCSKVTDSGIAYLK 201
SL+I+ C +TD+ ++ L S NL+SL C +T SGI+YL
Sbjct: 142 -----------SLSIRGCPGVTDAFLQCLATTKRSSEANLRSLDARQCKHLTSSGISYLA 190
Query: 202 ------------------GLQKLTLLNLEGCP---------VTAACLD--SLSAL----- 227
G+ + E P ++ C+D ++S +
Sbjct: 191 NSSLKDMKINYLAVDDCLGVDNVAFFGFETSPGLRSLSSLSLSGLCVDETAISWIVKGCG 250
Query: 228 GSLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
SL LN+ RC+ LSD + I S + + L E L+ G+ NL SL +
Sbjct: 251 ASLQCLNVARCKVLSDFALLLMAPLISSPRFIKLNLQECP---LITNTGIKNLFSLEEEK 307
Query: 286 CGIGDEGLVNLTGLCNLK-CLELSDTQ---VGSSGLRHLSGLTNLESINLS-FTGISDGS 340
DE L NLK CL + D +G G NL +NL +SD
Sbjct: 308 NQDDDEILPTSLAFLNLKNCLNIGDDAMVLIGKYG-------GNLIKLNLKGLRKVSDRG 360
Query: 341 LRKLA-GLSSLKSLNLDARQITDTGLAALTSL-TGLTHLDLFGARITDSGAAYLR---NF 395
+ +LA G LK ++L R IT L L L LD+ R +S A +L
Sbjct: 361 IMELAKGCPLLKKMSLSGRNITVQTFKLLGKLCRKLQVLDISRRRDLESPACFLHLVSRV 420
Query: 396 KNLRSLEICGGGLTDAGLTGLVS 418
L +++ + DAG+T L S
Sbjct: 421 HPLLRIDLSATNVCDAGVTLLAS 443
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 52 IASQGSSLLSVDLSGSDVTDSGLIHLKD-CSNLQSLDFNFCIQISDGGLEHLRGLS-NLT 109
+ S+ LL +DLS ++V D+G+ L C L++++ + C QI+D E L L
Sbjct: 416 LVSRVHPLLRIDLSATNVCDAGVTLLASACRQLENINLSKCAQITDFAAEALASRCFQLR 475
Query: 110 SLSFRRNNAITAQGMKAFAGL-INLVKLDLERCTRI--HGGLVNLKGLMKLESLNIKWCN 166
L IT + + A A I L LDL TR+ G LV G +++ L +K C+
Sbjct: 476 ILLLANARGITDRTLTALAFTKIPLEILDLSGNTRVTDEGLLVLCSGCQQIQELRLKGCD 535
Query: 167 CITDSDMK 174
++ +K
Sbjct: 536 RLSQKVVK 543
>gi|320167410|gb|EFW44309.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 702
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 121/294 (41%), Gaps = 6/294 (2%)
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
+ N IT + LT L L + +++T GL LTLL+L P+T+ +
Sbjct: 67 YTNNITSIPANAFASLTRLTILTLDVNQITSIPATAFTGLSALTLLSLGSNPITSMSASA 126
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
+ L L L+L+ ++ F+ + +L + L +IT L +L+ L L
Sbjct: 127 FTDLTKLTQLSLDNTPITSISANAFAGLSALTQMFLYQTQITSISASAFADLRSLQKLYL 186
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
I TGL L L+LS Q+ S + L++L + L F +S +
Sbjct: 187 YGNRITSISANAFTGLTKLAYLDLSYNQITSISANAFADLSSLTDLRLYFNQMSSLAANT 246
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
GLS+L L+L QIT A T L L L L IT A +L L++
Sbjct: 247 FTGLSALTQLSLLNNQITAISANAFTGLNALKLLYLHNNLITTIAANSFAGLPSLTVLQV 306
Query: 404 CGGGLTD------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
+T GL+ L ++ ++ITS L L+ L L++ T
Sbjct: 307 YNNTITSISANAFTGLSALTMFLLNYNQITSIPASAFTELTTLQVLALDNNPFT 360
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 120/298 (40%), Gaps = 35/298 (11%)
Query: 85 SLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRI 144
+LD N QI+ GLS LT LS +N IT+ AF L L +L L+
Sbjct: 89 TLDVN---QITSIPATAFTGLSALTLLSLG-SNPITSMSASAFTDLTKLTQLSLDNTPIT 144
Query: 145 HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQ 204
GL L + + + IT + L +L+ L + +++T GL
Sbjct: 145 SISANAFAGLSALTQMFL-YQTQITSISASAFADLRSLQKLYLYGNRITSISANAFTGLT 203
Query: 205 KLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI 264
KL YL+L+ Q++ F+ + SL L L FN++
Sbjct: 204 KLA------------------------YLDLSYNQITSISANAFADLSSLTDLRLYFNQM 239
Query: 265 TDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSD---TQVGSSGLRHLS 321
+ GL+ L L+L + I TGL LK L L + T + ++ L
Sbjct: 240 SSLAANTFTGLSALTQLSLLNNQITAISANAFTGLNALKLLYLHNNLITTIAANSFAGLP 299
Query: 322 GLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
LT L+ N + T IS + GLS+L L+ QIT +A T LT L L L
Sbjct: 300 SLTVLQVYNNTITSISANA---FTGLSALTMFLLNYNQITSIPASAFTELTTLQVLAL 354
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 90/212 (42%), Gaps = 20/212 (9%)
Query: 14 LVYSRCLTEVSLEAFRDC-ALQDLCLGQYPGVNDKWMDVIASQG-SSLLSVDLSGSDVTD 71
+Y +T +S AF D +LQ L L G + A G + L +DLS + +T
Sbjct: 161 FLYQTQITSISASAFADLRSLQKLYLY---GNRITSISANAFTGLTKLAYLDLSYNQITS 217
Query: 72 SGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLI 131
D S+L L F Q+S GLS LT LS NN ITA AF GL
Sbjct: 218 ISANAFADLSSLTDLRLYFN-QMSSLAANTFTGLSALTQLSLL-NNQITAISANAFTGL- 274
Query: 132 NLVKLDLERCTRIHGGLV------NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSL 185
N +KL +H L+ + GL L L + + N IT +GL+ L
Sbjct: 275 NALKL-----LYLHNNLITTIAANSFAGLPSLTVLQV-YNNTITSISANAFTGLSALTMF 328
Query: 186 QISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
++ +++T + L L +L L+ P T
Sbjct: 329 LLNYNQITSIPASAFTELTTLQVLALDNNPFT 360
>gi|389592901|ref|XP_001681716.2| putative surface antigen protein [Leishmania major strain Friedlin]
gi|321399718|emb|CAJ02964.2| putative surface antigen protein [Leishmania major strain Friedlin]
Length = 560
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 170/400 (42%), Gaps = 38/400 (9%)
Query: 6 ISQQIF---NELVYSRCLTEVSLEA-FRDCALQDLCLGQYP----GVNDKWMDVIASQGS 57
+S +F N Y+ L E+ + +R ++DL P + D W SQ
Sbjct: 78 VSVNVFVGLNVSTYAGTLPEIPVNVDYRHVMIRDLGFWNMPLLSGTLPDSW-----SQLG 132
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRG-LSNLTSLSFRR- 115
LLSV LSG V+ + L+ L C ++ G L L L NL L R+
Sbjct: 133 GLLSVTLSGCGVSGTLPASWGLMVRLRELTVRDCRHLT-GSLPSLWSWLPNLQKLVLRQL 191
Query: 116 --NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLV-NLKGLMKLESLNIKWCNCITDSD 172
+ + A+ ++ + +L++L++ I G L + L +LN++
Sbjct: 192 QLSGTLPAE----WSRVTSLLELEIVAAGDITGTLPPEWSSIKSLRTLNLE--GTQVSGT 245
Query: 173 MKP-LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
+ P S + +L +L++ ++V+ S + L LNLEG V+ S + SL
Sbjct: 246 LPPGWSEMKSLTNLELEGTQVSGSLPPQWVSMASLRTLNLEGTQVSGTLPPGWSEMKSLT 305
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT---DECLVHLKGLTNLESLNLDSCGI 288
L L Q+S +S I SL+ LNL +++ +K LTNLE G
Sbjct: 306 NLELEGTQVSGTLPPGWSSIKSLRTLNLEGTQVSGTLPPGWSEMKSLTNLELEGTQVSGT 365
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVG---SSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
G + +L+ L L TQV G + LTNL L T +S +
Sbjct: 366 LPPGWSEMK---SLRTLNLEGTQVSGALPPGWGEMKSLTNL---YLEGTQLSGSLPTEWR 419
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
G+ SL +L L+ Q++ + +SLT L LDL G +++
Sbjct: 420 GMKSLTNLYLEGTQVSGSLPPQWSSLTSLRTLDLEGTQVS 459
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 152/337 (45%), Gaps = 13/337 (3%)
Query: 126 AFAGLINLVKLDLERCTRIHGGLVNLKGLM-KLESLNIKWCNCITDSDMKPLSGLTNLKS 184
+++ L L+ + L C + G L GLM +L L ++ C +T S S L NL+
Sbjct: 127 SWSQLGGLLSVTLSGCG-VSGTLPASWGLMVRLRELTVRDCRHLTGSLPSLWSWLPNLQK 185
Query: 185 LQISCSKVTDSGIAYLKGLQKLTLLNLE---GCPVTAACLDSLSALGSLFYLNLNRCQLS 241
L + ++ SG + + +LL LE +T S++ SL LNL Q+S
Sbjct: 186 LVLR--QLQLSGTLPAEWSRVTSLLELEIVAAGDITGTLPPEWSSIKSLRTLNLEGTQVS 243
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
+S++ SL L L +++ + +L +LNL+ + + + +
Sbjct: 244 GTLPPGWSEMKSLTNLELEGTQVSGSLPPQWVSMASLRTLNLEGTQVSGTLPPGWSEMKS 303
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
L LEL TQV + S + +L ++NL T +S + + SL +L L+ Q++
Sbjct: 304 LTNLELEGTQVSGTLPPGWSSIKSLRTLNLEGTQVSGTLPPGWSEMKSLTNLELEGTQVS 363
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA------GLTG 415
T + + L L+L G +++ + K+L +L + G L+ + G+
Sbjct: 364 GTLPPGWSEMKSLRTLNLEGTQVSGALPPGWGEMKSLTNLYLEGTQLSGSLPTEWRGMKS 423
Query: 416 LVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
L +L + ++++ + L +LR+L LE +V+
Sbjct: 424 LTNLYLEGTQVSGSLPPQWSSLTSLRTLDLEGTQVSG 460
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 139/308 (45%), Gaps = 14/308 (4%)
Query: 54 SQGSSLLSVDL-SGSDVTDSGLIHLKDCSNLQSLDFNFCIQIS---DGGLEHLRGLSNLT 109
S+ +SLL +++ + D+T + +L++L+ Q+S G ++ L+NL
Sbjct: 202 SRVTSLLELEIVAAGDITGTLPPEWSSIKSLRTLNLE-GTQVSGTLPPGWSEMKSLTNLE 260
Query: 110 SLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL-NIKWCNCI 168
+ + ++ Q + + +L L+LE T++ G L G +++SL N++
Sbjct: 261 LEGTQVSGSLPPQ----WVSMASLRTLNLE-GTQVSGTLP--PGWSEMKSLTNLELEGTQ 313
Query: 169 TDSDMKP-LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSAL 227
+ P S + +L++L + ++V+ + ++ LT L LEG V+ S +
Sbjct: 314 VSGTLPPGWSSIKSLRTLNLEGTQVSGTLPPGWSEMKSLTNLELEGTQVSGTLPPGWSEM 373
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
SL LNL Q+S + ++ SL L L +++ +G+ +L +L L+
Sbjct: 374 KSLRTLNLEGTQVSGALPPGWGEMKSLTNLYLEGTQLSGSLPTEWRGMKSLTNLYLEGTQ 433
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
+ + L +L+ L+L TQV S + + E++ L +S + + +
Sbjct: 434 VSGSLPPQWSSLTSLRTLDLEGTQVSGRLPPEWSRMLSAENLQLEHCDLSGSLPPEWSAM 493
Query: 348 SSLKSLNL 355
L+ + L
Sbjct: 494 PRLRLVGL 501
>gi|290970032|ref|XP_002668015.1| predicted protein [Naegleria gruberi]
gi|284081037|gb|EFC35271.1| predicted protein [Naegleria gruberi]
Length = 224
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 5/204 (2%)
Query: 203 LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
+++LT L++ + + + L YL++ R ++ G + + LK L + +N
Sbjct: 1 MRQLTCLSVSNNNIGNEGFKFICEMKQLTYLDVGRNDINSKGLNHITNLDKLKDLRIYYN 60
Query: 263 EITD--ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
+ D + + +K LTNL N+++ I ++G ++ L + L +S ++G+ GL H+
Sbjct: 61 SVGDGAKYISEMKQLTNL---NVNTACINEKGAKFISELPLVTNLNISFNEIGNQGLEHI 117
Query: 321 SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
S + L +N+ I D + L GL L +L++ I + G L+ + LTHLD+
Sbjct: 118 SRMKQLTHLNIQSNNIDDTGVYFLHGLDQLTTLDISKHIIGEKGTKLLSEMEQLTHLDIS 177
Query: 381 GARITDSGAAYLRNFKNLRSLEIC 404
I G ++ KNL IC
Sbjct: 178 ECCIQYEGVKHISEMKNLTYPNIC 201
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 253 SLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQV 312
L L++ N I +E + + L L++ I +GL ++T L LK L + V
Sbjct: 3 QLTCLSVSNNNIGNEGFKFICEMKQLTYLDVGRNDINSKGLNHITNLDKLKDLRIYYNSV 62
Query: 313 GSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT 372
G G +++S + L ++N++ I++ + ++ L + +LN+ +I + GL ++ +
Sbjct: 63 GD-GAKYISEMKQLTNLNVNTACINEKGAKFISELPLVTNLNISFNEIGNQGLEHISRMK 121
Query: 373 GLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG------LTGLVSLNVSNSRI 426
LTHL++ I D+G +L L +L+I + + G + L L++S I
Sbjct: 122 QLTHLNIQSNNIDDTGVYFLHGLDQLTTLDISKHIIGEKGTKLLSEMEQLTHLDISECCI 181
Query: 427 TSAGLRHLKPLKNL 440
G++H+ +KNL
Sbjct: 182 QYEGVKHISEMKNL 195
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 27/249 (10%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW 164
+ LT LS NN I +G K + L LD+ R +N K
Sbjct: 1 MRQLTCLSVSNNN-IGNEGFKFICEMKQLTYLDVGR-----------------NDINSKG 42
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
N IT+ D LK L+I + V D G Y+ +++LT LN+ + +
Sbjct: 43 LNHITNLD--------KLKDLRIYYNSVGD-GAKYISEMKQLTNLNVNTACINEKGAKFI 93
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
S L + LN++ ++ + G E S++ L LN+ N I D + L GL L +L++
Sbjct: 94 SELPLVTNLNISFNEIGNQGLEHISRMKQLTHLNIQSNNIDDTGVYFLHGLDQLTTLDIS 153
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
IG++G L+ + L L++S+ + G++H+S + NL N+ G + L
Sbjct: 154 KHIIGEKGTKLLSEMEQLTHLDISECCIQYEGVKHISEMKNLTYPNICLNCFGKGGAKCL 213
Query: 345 AGLSSLKSL 353
+ +L L
Sbjct: 214 CEMKNLIKL 222
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 1/190 (0%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N I + K + + L L + + + G+ ++ L KL L + V +S
Sbjct: 12 NNIGNEGFKFICEMKQLTYLDVGRNDINSKGLNHITNLDKLKDLRIYYNSVGDGA-KYIS 70
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
+ L LN+N +++ G + S++ + LN+ FNEI ++ L H+ + L LN+ S
Sbjct: 71 EMKQLTNLNVNTACINEKGAKFISELPLVTNLNISFNEIGNQGLEHISRMKQLTHLNIQS 130
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
I D G+ L GL L L++S +G G + LS + L +++S I ++ ++
Sbjct: 131 NNIDDTGVYFLHGLDQLTTLDISKHIIGEKGTKLLSEMEQLTHLDISECCIQYEGVKHIS 190
Query: 346 GLSSLKSLNL 355
+ +L N+
Sbjct: 191 EMKNLTYPNI 200
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 19/161 (11%)
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
L CL +S+ +G+ G + + + L +++ I+ L + L LK L + +
Sbjct: 4 LTCLSVSNNNIGNEGFKFICEMKQLTYLDVGRNDINSKGLNHITNLDKLKDLRIYYNSVG 63
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNV 421
D G ++ + LT+L++ A I + GA ++ + L + +LN+
Sbjct: 64 D-GAKYISEMKQLTNLNVNTACINEKGAKFI------------------SELPLVTNLNI 104
Query: 422 SNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRD 462
S + I + GL H+ +K L L ++S + + L D
Sbjct: 105 SFNEIGNQGLEHISRMKQLTHLNIQSNNIDDTGVYFLHGLD 145
>gi|357511815|ref|XP_003626196.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355501211|gb|AES82414.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 623
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 197/402 (49%), Gaps = 28/402 (6%)
Query: 69 VTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEHLRGLS---NLTSLSFRRNNAITAQGM 124
VTD GL + CS L+ L +C++ISD G++ L N +S+ + +T + +
Sbjct: 197 VTDIGLAKIAVGCSKLEKLSLKWCLEISDLGIDLLSKKCFDLNFLDVSYLK---VTNESL 253
Query: 125 KAFAGLINLVKLDLERCTRI-HGGLVNL-KGLMKLESLNIKWCNCITDSD-MKPLSGLTN 181
++ A L+ L + C + GL L KG L+++++ CNC++ S + +SG
Sbjct: 254 RSIASLLKLEVFIMVGCYLVDDAGLQFLEKGCPLLKAIDVSRCNCVSPSGLLSVISGHEG 313
Query: 182 LKSLQI-SC-SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL-SALGSLFYLNLNRC 238
L+ + C S+++ LK L+ L+++ ++G V+ L + S SL L L++C
Sbjct: 314 LEQINAGHCLSELSAPLTNGLKNLKHLSVIRIDGVRVSDFILQIIGSNCKSLVELGLSKC 373
Query: 239 -QLSDDGCEKFSKIGSLKVLNLGFNE-ITDECLVHLK-GLTNLESLNLDSCGIGDE-GLV 294
+++ G + +L L+L +TD + + NL L L+SC + E GL
Sbjct: 374 IGVTNMGIMQVVGCCNLTTLDLTCCRFVTDAAISTIANSCPNLACLKLESCDMVTEIGLY 433
Query: 295 NLTGLC-NLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLA-GLSSL 350
+ C L+ L+L+D V L++LS + L + L T ISD L +A L
Sbjct: 434 QIGSSCLMLEELDLTDCSGVNDIALKYLSRCSKLVRLKLGLCTNISDIGLAHIACNCPKL 493
Query: 351 KSLNL-DARQITDTGLAALTS-LTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICGGG 407
L+L +I D GLAALT+ L L+L + RITD+G + N L E+ G
Sbjct: 494 TELDLYRCVRIGDDGLAALTTGCNKLAMLNLAYCNRITDAGLKCISNLGELSDFEL--RG 551
Query: 408 LTDAGLTGLVSLNVSNSRITSAGLRHLKPLKN--LRSLTLES 447
L++ G+ ++ VS R+ + L+H + L + R+L S
Sbjct: 552 LSNITSIGIKAVAVSCKRLANLDLKHCEKLDDTGFRALAFYS 593
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 85/178 (47%), Gaps = 7/178 (3%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSD-VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEH 101
V D + IA+ +L + L D VT+ GL + C L+ LD C ++D L++
Sbjct: 401 VTDAAISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKY 460
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRI-HGGLVNLK-GLMKLE 158
L S L L I+ G+ A L +LDL RC RI GL L G KL
Sbjct: 461 LSRCSKLVRLKLGLCTNISDIGLAHIACNCPKLTELDLYRCVRIGDDGLAALTTGCNKLA 520
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVTDSGI-AYLKGLQKLTLLNLEGC 214
LN+ +CN ITD+ +K +S L L ++ S +T GI A ++L L+L+ C
Sbjct: 521 MLNLAYCNRITDAGLKCISNLGELSDFELRGLSNITSIGIKAVAVSCKRLANLDLKHC 578
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 20 LTEVSLEAFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGS-DVTDSGLIHL 77
+ +++L+ C+ L L LG ++D + IA L +DL + D GL L
Sbjct: 453 VNDIALKYLSRCSKLVRLKLGLCTNISDIGLAHIACNCPKLTELDLYRCVRIGDDGLAAL 512
Query: 78 KD-CSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVK 135
C+ L L+ +C +I+D GL+ + L L+ R + IT+ G+KA A L
Sbjct: 513 TTGCNKLAMLNLAYCNRITDAGLKCISNLGELSDFELRGLSNITSIGIKAVAVSCKRLAN 572
Query: 136 LDLERCTRI 144
LDL+ C ++
Sbjct: 573 LDLKHCEKL 581
>gi|326436437|gb|EGD82007.1| hypothetical protein PTSG_11905 [Salpingoeca sp. ATCC 50818]
Length = 1127
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 195/442 (44%), Gaps = 37/442 (8%)
Query: 23 VSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSN 82
V L FR + ++ + Y GV ++ + + +++ ++DL+G+D+T L+ +N
Sbjct: 262 VWLLQFRWDTVTNITIRGYEGV--EFPLAVLNAMTNVHTIDLAGNDIT--RLV----PTN 313
Query: 83 LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL--DLER 140
+ NF + S +T+L RN +++ A + NL L D +
Sbjct: 314 AAVDNKNFTLGDS------------ITTLDVTRN-SLSELPQATLAAMPNLTHLTWDGNQ 360
Query: 141 CTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYL 200
I G+ L +L+++ N I + + L +L+ L +S ++++ +
Sbjct: 361 LAEIEPGV--FAATTNLTTLSLR-DNRILNVVAGTFAHLNSLRDLDLSDNRISSVAVDAF 417
Query: 201 KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG 260
GL + +L+L +++ + + L SL L+L+ ++S F+ + SL L+LG
Sbjct: 418 AGLFSVVVLHLNDNRISSVVAHTFADLVSLRELDLSNNRISSIAAFAFAGLTSLVELHLG 477
Query: 261 FNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
N + + L++L L+L + I + + L +L L LS+ ++ S
Sbjct: 478 NNTVFEVVADAFADLSSLPKLDLSNNRISNVSALAFADLTSLTELRLSNNRISSIVENAF 537
Query: 321 SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
SGLT+L ++++ F IS L L+SLNLD + +LT L+HL L
Sbjct: 538 SGLTSLMTLDVHFNRISTLDENALISTFKLESLNLDHNPVDTFPPRLFVNLTRLSHLRLT 597
Query: 381 GARITDSGAAYLRNFKNLRSLEICGGGLTDA------GLTGLVSLNVSNSRITSAGLRHL 434
R T + + LR L + T+ LT LV L ++ + IT HL
Sbjct: 598 STRATTLPTSLFEHNTRLRELWLFHNRFTEIEVGTFDKLTRLVFLTLTGNDIT-----HL 652
Query: 435 KPLKNLRSLTLESCKVTANDIK 456
+ R L+ ++ ND++
Sbjct: 653 PSMLFARLTRLKELYISNNDVR 674
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 13/258 (5%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLS--NLTSLSFR 114
+SL+ + L + V + D S+L LD +S+ + ++ L+ +LTSL+
Sbjct: 469 TSLVELHLGNNTVFEVVADAFADLSSLPKLD------LSNNRISNVSALAFADLTSLTEL 522
Query: 115 R--NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN-LKGLMKLESLNIKWCNCITDS 171
R NN I++ AF+GL +L+ LD+ RI N L KLESLN+ N +
Sbjct: 523 RLSNNRISSIVENAFSGLTSLMTLDVH-FNRISTLDENALISTFKLESLNLD-HNPVDTF 580
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
+ LT L L+++ ++ T + + +L L L T + + L L
Sbjct: 581 PPRLFVNLTRLSHLRLTSTRATTLPTSLFEHNTRLRELWLFHNRFTEIEVGTFDKLTRLV 640
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
+L L ++ F+++ LK L + N++ +GL +L +L L I D
Sbjct: 641 FLTLTGNDITHLPSMLFARLTRLKELYISNNDVRTVDPNAFRGLESLTTLTLVRNRINDL 700
Query: 292 GLVNLTGLCNLKCLELSD 309
T L+ ++LSD
Sbjct: 701 HADTFTTATALENVDLSD 718
>gi|87308227|ref|ZP_01090369.1| hypothetical protein DSM3645_21557 [Blastopirellula marina DSM
3645]
gi|87289309|gb|EAQ81201.1| hypothetical protein DSM3645_21557 [Blastopirellula marina DSM
3645]
Length = 376
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 4/277 (1%)
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNC-ITDSDMKPL 176
A T + ++ L ++ +L L R +++ + + +M+L L + + TD DM+ +
Sbjct: 71 AATEENLRHLVKLPHVERLWLGRSFKLNER--SWEAIMQLRELEYLYLHSQPTDDDMRQI 128
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+ LTNL++L I +++ G+ YL+ L+ L L ++ C L+ + SL L L
Sbjct: 129 AQLTNLRTLLIDGRNLSNIGLWYLEELRFLENLTIQSASFDGDCFHYLANVRSLTNLTLQ 188
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
+L ++ L++L L + + LT+L SLNL + E + L
Sbjct: 189 SDKLKSSDLAGLGELPQLELLFLSVQSVDGAGFAEIGKLTHLRSLNLRNVRTTAEQMKPL 248
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
L L+ L ++D+ + GL + L +L + L+ + I D L L L L +LNL
Sbjct: 249 AQLQELQFLTMNDSSI-KGGLGPIGDLRDLHRLELANSTIRDEDLDSLQQLPLLANLNLA 307
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
+ITD GL L + L L++ +T G L+
Sbjct: 308 HTKITDAGLVKLGQMKRLNTLNVRNTTVTKEGLQALQ 344
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 119/294 (40%), Gaps = 32/294 (10%)
Query: 204 QKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFN 262
Q L +N T L L L + L L R +L++ E ++ L+ L L +
Sbjct: 60 QMLFNVNFVDAAATEENLRHLVKLPHVERLWLGRSFKLNERSWEAIMQLRELEYLYL-HS 118
Query: 263 EITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG 322
+ TD+ + + LTNL +L +D + + GL L L L+ L + +L+
Sbjct: 119 QPTDDDMRQIAQLTNLRTLLIDGRNLSNIGLWYLEELRFLENLTIQSASFDGDCFHYLAN 178
Query: 323 LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
+ +L ++ L + L L L L+ L L + + G A + LT L L+L
Sbjct: 179 VRSLTNLTLQSDKLKSSDLAGLGELPQLELLFLSVQSVDGAGFAEIGKLTHLRSLNLRNV 238
Query: 383 RITDSGAAYLRNFKNLRSLEI----CGGGLTDAG-LTGLVSLNVSNS------------- 424
R T L + L+ L + GGL G L L L ++NS
Sbjct: 239 RTTAEQMKPLAQLQELQFLTMNDSSIKGGLGPIGDLRDLHRLELANSTIRDEDLDSLQQL 298
Query: 425 -----------RITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLV 467
+IT AGL L +K L +L + + VT ++ LQ + P L+
Sbjct: 299 PLLANLNLAHTKITDAGLVKLGQMKRLNTLNVRNTTVTKEGLQALQGK-WPQLI 351
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 125/263 (47%), Gaps = 22/263 (8%)
Query: 20 LTEVSLEAFRDC-ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLK 78
L E S EA L+ L L P +D M IA Q ++L ++ + G ++++ GL +L+
Sbjct: 97 LNERSWEAIMQLRELEYLYLHSQPTDDD--MRQIA-QLTNLRTLLIDGRNLSNIGLWYLE 153
Query: 79 DCSNLQSLDFNFCIQIS--DGGLEHLRGLSNLTSLSFRRNNAITAQGMKA--FAGLINLV 134
+ L+ N IQ + DG H L+N+ SL+ N + + +K+ AGL L
Sbjct: 154 ELRFLE----NLTIQSASFDGDCFHY--LANVRSLT---NLTLQSDKLKSSDLAGLGELP 204
Query: 135 KLDLE--RCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK 191
+L+L + G G + L L SLN++ T MKPL+ L L+ L ++ S
Sbjct: 205 QLELLFLSVQSVDGAGFAEIGKLTHLRSLNLRNVRT-TAEQMKPLAQLQELQFLTMNDSS 263
Query: 192 VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI 251
+ G+ + L+ L L L + LDSL L L LNL +++D G K ++
Sbjct: 264 IK-GGLGPIGDLRDLHRLELANSTIRDEDLDSLQQLPLLANLNLAHTKITDAGLVKLGQM 322
Query: 252 GSLKVLNLGFNEITDECLVHLKG 274
L LN+ +T E L L+G
Sbjct: 323 KRLNTLNVRNTTVTKEGLQALQG 345
>gi|328870633|gb|EGG19006.1| Histidine kinase A [Dictyostelium fasciculatum]
Length = 1765
Score = 72.0 bits (175), Expect = 6e-10, Method: Composition-based stats.
Identities = 101/394 (25%), Positives = 174/394 (44%), Gaps = 64/394 (16%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHL--KDCSNLQSLDFNFCIQISDGGLEH 101
++D + Q L +D SG +H +C L+ L N C ++ ++
Sbjct: 1375 ISDHSAVALIQQSPKLAIIDFSGCHQIGDATVHAIANNCLLLKELSMNKCRNVTSSAIDK 1434
Query: 102 L-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL 160
L R L ++ +S ++ A + N ++L + C L+
Sbjct: 1435 LFRNLHDIRLISLAQSIASASD---------NTLRLIGKYCP-------------DLQYA 1472
Query: 161 NIKWCNCITDSDMKPLSGLTN-LKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGCPVT 217
N I+D + ++ TN L L IS CS ++D GIAY+ + KL + +
Sbjct: 1473 NFTHNPIISDQGITAMTKFTNSLLELDISYCSSISDVGIAYIAQHCSKLRIFRM------ 1526
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 277
A L+++++L + +L GC K S +LG C+ KG T
Sbjct: 1527 -ANLNNVTSLKPIGRGCQELVELDISGCHKISS-------DLG-------CIT--KGCTK 1569
Query: 278 LESLNLDSC-GIGDEGLVNLTG-LCNLKCLELSDTQVGSSGLRHLSGLTN----LESINL 331
L + L C G+ D +++ G + ++ L D G+ + + +T+ L S+N+
Sbjct: 1570 LTNFRLRRCYGLQDVTMLSEDGEIHSMPKLTQLDWSYGNIEFQTIHSITHSCKQLTSLNI 1629
Query: 332 SF-TGISDGSLRKLAG-LSSLKSLNLDAR-QITDTGLAALTS---LTGLTHLDLFGAR-I 384
+F ++D S+ ++A L+SLK L +DA ITD G+ AL+ + L L L G R I
Sbjct: 1630 AFCKNLTDTSIERIASSLTSLKKLKIDAVVNITDEGIKALSEGAIYSTLEVLSLVGCRKI 1689
Query: 385 TDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVS 418
+D A ++ F+NLR + I G +T AG + S
Sbjct: 1690 SDVSAHHILRFQNLRKISIGGCLMTTAGANLIAS 1723
>gi|406831706|ref|ZP_11091300.1| peptidase M56 BlaR1 [Schlesneria paludicola DSM 18645]
Length = 1125
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 166/379 (43%), Gaps = 36/379 (9%)
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
GL+ G + LS +R++ I + G+++ A K L+ G + ++
Sbjct: 697 GLKFTEGRRKIQVLSLKRSDHIQSVGLRSGAAA---SKHPLDEANTRDGDIAAAIDRLRK 753
Query: 158 ESLNIK----------WCNCITD-SDMKPLSG---------LTNLKSLQISCSKV--TDS 195
+ + ++ W I D S P+SG ++ +SL + V T +
Sbjct: 754 QEIFVREFNSRNDPRYWIQVIVDLSRTIPISGDEILVDIETISRDRSLDLHLKNVDLTPA 813
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 255
+A L + ++ L L G + L ++S L + L L +DDG ++ + +L+
Sbjct: 814 SVARLGATKHISTLELSGRSINDELLQAISNL-PIGRLELGSGPYTDDGVKQLANCVALE 872
Query: 256 VLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSS 315
+++ IT++C HL L L + L S L L + +L+ + +S T+ +
Sbjct: 873 SISIAGPSITNDCFTHLVRLPRLRGVGLRSSQFTSGVLATLARIPDLRRMTISTTEQLTF 932
Query: 316 GLRHLSGLTNLESINLSFTGISDGSLRKLAGL-SSLKSLNLDARQITDTGLAALTSLTGL 374
L + L S++ + D LA L+ ++ IT+ G+AAL L L
Sbjct: 933 DL---GPFSELRSVDFTGATFGDDLTHALAEKCPRLEEASIRNSSITNAGVAALVPLRHL 989
Query: 375 THLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITS 428
L L A+I D A ++ NL L++ + D +G + L LN+ ++I++
Sbjct: 990 RVLALDRAQIDDRIADSIQKMPNLEWLDLNNCDIGDRTLAAASGCSRLSYLNLGQTQISN 1049
Query: 429 AGLRHLKPLKNLRSLTLES 447
GL + LKN+R+L+L S
Sbjct: 1050 EGLAVIGKLKNIRNLSLWS 1068
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 169 TDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG 228
TD +K L+ L+S+ I+ +T+ +L L +L + L T+ L +L+ +
Sbjct: 858 TDDGVKQLANCVALESISIAGPSITNDCFTHLVRLPRLRGVGLRSSQFTSGVLATLARIP 917
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
L + ++ + FS++ S+ F + L + LE ++ + I
Sbjct: 918 DLRRMTISTTEQLTFDLGPFSELRSVDFTGATFGDDLTHALA--EKCPRLEEASIRNSSI 975
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ G+ L L +L+ L L Q+ + + NLE ++L+ I D +L +G S
Sbjct: 976 TNAGVAALVPLRHLRVLALDRAQIDDRIADSIQKMPNLEWLDLNNCDIGDRTLAAASGCS 1035
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLR-----SLE 402
L LNL QI++ GLA + L + +L L+ ++TD ++L+ + R L+
Sbjct: 1036 RLSYLNLGQTQISNEGLAVIGKLKNIRNLSLWSNQQLTDECVSHLKQLPDYRMKFVLHLQ 1095
Query: 403 ICGGGLTDAGLTGLVSLNVSNSRITSAG 430
+ G +T G+ L + + N+ I+ A
Sbjct: 1096 LDGTQITKNGILELQA-ALPNASISPAA 1122
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 119/267 (44%), Gaps = 11/267 (4%)
Query: 62 VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITA 121
++L TD G+ L +C L+S+ I++ HL L L + R ++ T+
Sbjct: 850 LELGSGPYTDDGVKQLANCVALESISIA-GPSITNDCFTHLVRLPRLRGVGLR-SSQFTS 907
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
+ A + +L ++ + ++ +L +L S++ D
Sbjct: 908 GVLATLARIPDLRRMTISTTEQL---TFDLGPFSELRSVDFTGATFGDDLTHALAEKCPR 964
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
L+ I S +T++G+A L L+ L +L L+ + DS+ + +L +L+LN C +
Sbjct: 965 LEEASIRNSSITNAGVAALVPLRHLRVLALDRAQIDDRIADSIQKMPNLEWLDLNNCDIG 1024
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS-CGIGDEGLVNLTGLC 300
D S L LNLG +I++E L + L N+ +L+L S + DE + +L L
Sbjct: 1025 DRTLAAASGCSRLSYLNLGQTQISNEGLAVIGKLKNIRNLSLWSNQQLTDECVSHLKQLP 1084
Query: 301 NLKC-----LELSDTQVGSSGLRHLSG 322
+ + L+L TQ+ +G+ L
Sbjct: 1085 DYRMKFVLHLQLDGTQITKNGILELQA 1111
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 161/368 (43%), Gaps = 41/368 (11%)
Query: 34 QDLCLGQYPGVNDK--WMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC 91
Q++ + ++ ND W+ VI + + +SG ++ L+ ++ S +SLD +
Sbjct: 754 QEIFVREFNSRNDPRYWIQVIVDLSRT---IPISGDEI----LVDIETISRDRSLDLHLK 806
Query: 92 -IQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN 150
+ ++ + L ++++L +I + ++A + L + +L+L G+
Sbjct: 807 NVDLTPASVARLGATKHISTLELS-GRSINDELLQAISNL-PIGRLELGSGPYTDDGVKQ 864
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD---SGIAYLKGLQKLT 207
L + LES++I IT+ L L L+ + + S+ T + +A + L+++T
Sbjct: 865 LANCVALESISIA-GPSITNDCFTHLVRLPRLRGVGLRSSQFTSGVLATLARIPDLRRMT 923
Query: 208 LLNLEGCPVTAACLDSLSAL---GSLFYLNL-----NRCQ-----------LSDDGCEKF 248
+ E L ++ G+ F +L +C +++ G
Sbjct: 924 ISTTEQLTFDLGPFSELRSVDFTGATFGDDLTHALAEKCPRLEEASIRNSSITNAGVAAL 983
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
+ L+VL L +I D ++ + NLE L+L++C IGD L +G L L L
Sbjct: 984 VPLRHLRVLALDRAQIDDRIADSIQKMPNLEWLDLNNCDIGDRTLAAASGCSRLSYLNLG 1043
Query: 309 DTQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAGLSSLK-----SLNLDARQITD 362
TQ+ + GL + L N+ +++L S ++D + L L + L LD QIT
Sbjct: 1044 QTQISNEGLAVIGKLKNIRNLSLWSNQQLTDECVSHLKQLPDYRMKFVLHLQLDGTQITK 1103
Query: 363 TGLAALTS 370
G+ L +
Sbjct: 1104 NGILELQA 1111
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 14/228 (6%)
Query: 246 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
E S+ SL L+L ++T + L ++ +L L I DE L ++ L + L
Sbjct: 793 ETISRDRSLD-LHLKNVDLTPASVARLGATKHISTLELSGRSINDELLQAISNL-PIGRL 850
Query: 306 ELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL 365
EL G++ L+ LESI+++ I++ L L L+ + L + Q T L
Sbjct: 851 ELGSGPYTDDGVKQLANCVALESISIAGPSITNDCFTHLVRLPRLRGVGLRSSQFTSGVL 910
Query: 366 AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLV-------S 418
A L + L + + T+ L F LRS++ G D L
Sbjct: 911 ATLARIPDLRRMTI---STTEQLTFDLGPFSELRSVDFTGATFGDDLTHALAEKCPRLEE 967
Query: 419 LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 466
++ NS IT+AG+ L PL++LR L L+ ++ +Q +PNL
Sbjct: 968 ASIRNSSITNAGVAALVPLRHLRVLALDRAQIDDRIADSIQK--MPNL 1013
>gi|320165161|gb|EFW42060.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 641
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 112/262 (42%), Gaps = 2/262 (0%)
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
P + N SL+++ +++T GL LT LNL + + ++ + L +L +L
Sbjct: 57 PTAVPVNTTSLELNNNQITSISAGAFTGLTALTYLNLNSNSIRSISANAFTGLTALKHLP 116
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
L +L+D F+ + +L L+L N+IT LT L L LDS + +
Sbjct: 117 LGYNELADISATAFAGLTALNALHLQSNQITSISASAFASLTTLTYLRLDSNQLTNFAAN 176
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN 354
GL L L L Q+ S + LT L + L I+ GL++LK L
Sbjct: 177 VFAGLSALALLNLESNQITSISANAFTDLTALTLLYLQRNQITSIPTSAFTGLTALKDLE 236
Query: 355 LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLT 414
L QIT + L+ LT L LF +IT A L +L + G T
Sbjct: 237 LFNNQITAIAANTFSGLSALTQLYLFSNQITSIAANAFTGLPALTALALDGNRFTTLP-P 295
Query: 415 GLVSLNVSNSRITSAGLRHLKP 436
GL + + N S+G ++L P
Sbjct: 296 GLFT-TLPNGLYLSSGSQYLSP 316
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 106/255 (41%), Gaps = 26/255 (10%)
Query: 107 NLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCN 166
N TSL NN IT+ AF GL L L+L N
Sbjct: 63 NTTSLELN-NNQITSISAGAFTGLTALTYLNLNS-------------------------N 96
Query: 167 CITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA 226
I +GLT LK L + +++ D GL L L+L+ +T+ + ++
Sbjct: 97 SIRSISANAFTGLTALKHLPLGYNELADISATAFAGLTALNALHLQSNQITSISASAFAS 156
Query: 227 LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC 286
L +L YL L+ QL++ F+ + +L +LNL N+IT LT L L L
Sbjct: 157 LTTLTYLRLDSNQLTNFAANVFAGLSALALLNLESNQITSISANAFTDLTALTLLYLQRN 216
Query: 287 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAG 346
I TGL LK LEL + Q+ + SGL+ L + L I+ + G
Sbjct: 217 QITSIPTSAFTGLTALKDLELFNNQITAIAANTFSGLSALTQLYLFSNQITSIAANAFTG 276
Query: 347 LSSLKSLNLDARQIT 361
L +L +L LD + T
Sbjct: 277 LPALTALALDGNRFT 291
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 10/184 (5%)
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
N SL L++ I TGL L L L+ + S +GLT L+ + L + +
Sbjct: 63 NTTSLELNNNQITSISAGAFTGLTALTYLNLNSNSIRSISANAFTGLTALKHLPLGYNEL 122
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY----- 391
+D S AGL++L +L+L + QIT +A SLT LT+L L ++T+ A
Sbjct: 123 ADISATAFAGLTALNALHLQSNQITSISASAFASLTTLTYLRLDSNQLTNFAANVFAGLS 182
Query: 392 ---LRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 448
L N ++ + I TD LT L L + ++ITS L L+ L L +
Sbjct: 183 ALALLNLESNQITSISANAFTD--LTALTLLYLQRNQITSIPTSAFTGLTALKDLELFNN 240
Query: 449 KVTA 452
++TA
Sbjct: 241 QITA 244
Score = 38.1 bits (87), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 57/127 (44%), Gaps = 9/127 (7%)
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
SL L+ QIT A T LT LT+L+L I A L+ L + L D
Sbjct: 65 TSLELNNNQITSISAGAFTGLTALTYLNLNSNSIRSISANAFTGLTALKHLPLGYNELAD 124
Query: 411 ------AGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT---ANDIKRLQSR 461
AGLT L +L++ +++ITS L L L L+S ++T AN L +
Sbjct: 125 ISATAFAGLTALNALHLQSNQITSISASAFASLTTLTYLRLDSNQLTNFAANVFAGLSAL 184
Query: 462 DLPNLVS 468
L NL S
Sbjct: 185 ALLNLES 191
>gi|115741868|ref|XP_793918.2| PREDICTED: F-box/LRR-repeat protein 20-like [Strongylocentrotus
purpuratus]
Length = 431
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 121/239 (50%), Gaps = 16/239 (6%)
Query: 64 LSGSDVTDSGLIHLKD-CSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITA 121
+S + +TD+ L L D C L L+ ++C QISD G+E L RG S++ L + ++IT
Sbjct: 146 VSCTAITDNALKSLSDGCHLLSHLNISWCDQISDNGIEALVRGCSHIKVLILKGCHSITD 205
Query: 122 QGMKAFAGLI-NLVKLDLERCTRIH-GGLVNL-KGLMKLESLNIKWCNCITDSDMKPLSG 178
+G+ NL L+++ C I G++ L KG L+SL + C +TD+ + S
Sbjct: 206 EGITHIGSHCKNLTTLNVQGCVLISDDGMIALAKGCRTLQSLCVSGCTHLTDNTLSAFSQ 265
Query: 179 L-TNLKSLQIS-CSKVTDSGI-AYLKGLQKLTLLNLEGCPVTAACLDSLSALGS--LFYL 233
+K+L++S CS+ TD+G A + L ++LE C + S ALG L L
Sbjct: 266 FCPKIKTLEVSGCSQFTDNGFQALARTCIDLERMDLEECVLITDTALSYLALGCPMLQKL 325
Query: 234 NLNRCQL-SDDGCEKFSKIG----SLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC 286
L+ C+L +D+G G L+V+ L ITD L HL G L+ + L C
Sbjct: 326 TLSHCELITDEGIRHIGTSGCSTEHLQVIELDNCPLITDSSLEHLMGCQGLQRIELYDC 384
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 179/429 (41%), Gaps = 99/429 (23%)
Query: 67 SDVTDSGLIHLKDCSNLQSLD-FNFCIQISDGGLEHL--RGLSNLTSLSFRRNNAITAQG 123
+ V+ S I D SN Q +D FNF I +EH+ R L +LS ++T
Sbjct: 44 AQVSKSWNILALDGSNWQKVDLFNFQTDIEGPVVEHISKRCGGFLKNLSLHGCKSVTDDA 103
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+ FA + C I E LN++ C ITD + LS +
Sbjct: 104 LNTFA----------DNCRNI-------------EVLNLEDCKRITDHTAQSLSRYSKKL 140
Query: 184 SL--QISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC-QL 240
S +SC+ +TD+ + L +GC + L +LN++ C Q+
Sbjct: 141 SQLNMVSCTAITDNALKSLS----------DGCHL-------------LSHLNISWCDQI 177
Query: 241 SDDGCEKFSK-IGSLKVLNL-GFNEITDECLVHL-KGLTNLESLNLDSCG-IGDEGLVNL 296
SD+G E + +KVL L G + ITDE + H+ NL +LN+ C I D+G++ L
Sbjct: 178 SDNGIEALVRGCSHIKVLILKGCHSITDEGITHIGSHCKNLTTLNVQGCVLISDDGMIAL 237
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLS-FTGISDGSLRKLAGL-SSLKSLN 354
G L+S+ +S T ++D +L + +K+L
Sbjct: 238 A-----------------------KGCRTLQSLCVSGCTHLTDNTLSAFSQFCPKIKTLE 274
Query: 355 LD-ARQITDTGLAALT-SLTGLTHLDLFGAR-ITDSGAAYLR-NFKNLRSLEICGGGL-T 409
+ Q TD G AL + L +DL ITD+ +YL L+ L + L T
Sbjct: 275 VSGCSQFTDNGFQALARTCIDLERMDLEECVLITDTALSYLALGCPMLQKLTLSHCELIT 334
Query: 410 DAGLTGLVSLNVSNSR-----------ITSAGLRHLKPLKNLRSLTLESCK-VTANDIKR 457
D G+ + + S IT + L HL + L+ + L C+ +T I+R
Sbjct: 335 DEGIRHIGTSGCSTEHLQVIELDNCPLITDSSLEHLMGCQGLQRIELYDCQLITRAGIRR 394
Query: 458 LQSRDLPNL 466
L+++ LPN+
Sbjct: 395 LRTQ-LPNV 402
>gi|449435625|ref|XP_004135595.1| PREDICTED: F-box/LRR-repeat protein 3-like [Cucumis sativus]
Length = 640
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 196/414 (47%), Gaps = 33/414 (7%)
Query: 69 VTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKA 126
VTD GL + C L+ L +C+Q+SD GLE L + NL L +T + +++
Sbjct: 157 VTDVGLARIVVGCGRLERLSLKWCLQVSDLGLELLCKKCFNLRFLDLSYLK-VTNESLRS 215
Query: 127 FAGLINLVKLDLERCTRI-HGGLVNLK-GLMKLESLNIKWCNCITDSDMKP-LSGLTNLK 183
+ L L L + C + GL L+ G L+ L+I C+ I+ + L G L+
Sbjct: 216 ISSLPKLETLVMAGCLSVDDAGLQFLEHGCPFLKKLDISRCDGISSYGLTSILRGHDGLE 275
Query: 184 SLQIS--CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSA-LGSLFYLNLNRCQL 240
L S S+++ I LK L+ L + L+G +++ + +S L L L++C
Sbjct: 276 QLDASYCISELSTDSIYSLKNLKCLKAIRLDGTQLSSTFFNVISVHCEYLVELGLSKCLG 335
Query: 241 SDDG--CEKFSKIGSLKVLNLG-FNEITDECLVHLK-GLTNLESLNLDSCG-IGDEGLVN 295
D + S+ SLKVLNL + ITD + L SL L+SC I + L
Sbjct: 336 VTDANIIQLISRCISLKVLNLTCCHSITDAAISKTATSCLKLMSLKLESCNMITERSLDQ 395
Query: 296 LTGLC-NLKCLELSD-TQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKS 352
L C +L+ L+L+D V GL LS + L S+ L T I+D L K+ GL+ +
Sbjct: 396 LALNCPSLEELDLTDCCGVNDKGLECLSRCSQLLSLKLGLCTNITDKGLIKI-GLNCKRI 454
Query: 353 LNLDARQ---ITDTGLAALTS-LTGLTHLDL-FGARITDSGAAYLRNFKNLRSLEICG-G 406
LD + I D GL AL+S L L+L + ++TD G Y+ + + L LEI G
Sbjct: 455 HELDLYRCLGIGDAGLEALSSGCKKLMKLNLSYCNKLTDRGMGYIGHLEELCVLEIRGLH 514
Query: 407 GLTDAGLTG-------LVSLNVSNSR-ITSAGLRHLKPL-KNLRSLTLESCKVT 451
+T GLT LV L++ + + AG L NLR L + SC V+
Sbjct: 515 NVTSVGLTAVAAGCKRLVDLDMKQCQNVDDAGFWALASYAHNLRQLNVSSCAVS 568
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 128/298 (42%), Gaps = 70/298 (23%)
Query: 113 FRRNNAITAQGMKA---------FAGLINLVKLDLERCTRIHGGLVNL------------ 151
F R + I+ + ++ A N+ +LDL C+RI+ G V++
Sbjct: 39 FHRVDLISRKALRVRRIEFLLSLIAKFENIDELDLSVCSRINDGTVSIFVGFASSSLRRL 98
Query: 152 ----------KGLMK-------LESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVT 193
GL K LE +++ + D + +S LK +++ C VT
Sbjct: 99 ILRRSAGLSYIGLEKVTSHCTGLEMVDMSYSWRFGDREAAAVSNCEGLKEVRLDKCLGVT 158
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKF-SKI 251
D G+A + + GC G L L+L C Q+SD G E K
Sbjct: 159 DVGLARI----------VVGC-------------GRLERLSLKWCLQVSDLGLELLCKKC 195
Query: 252 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCN-LKCLELSD 309
+L+ L+L + ++T+E L + L LE+L + C + D GL L C LK L++S
Sbjct: 196 FNLRFLDLSYLKVTNESLRSISSLPKLETLVMAGCLSVDDAGLQFLEHGCPFLKKLDISR 255
Query: 310 TQ-VGSSGLRH-LSGLTNLESINLSF--TGISDGSLRKLAGLSSLKSLNLDARQITDT 363
+ S GL L G LE ++ S+ + +S S+ L L LK++ LD Q++ T
Sbjct: 256 CDGISSYGLTSILRGHDGLEQLDASYCISELSTDSIYSLKNLKCLKAIRLDGTQLSST 313
>gi|71657215|ref|XP_817126.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70882298|gb|EAN95275.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 835
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 196/435 (45%), Gaps = 71/435 (16%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF----- 113
LL +DL+ + VTD G L +C +Q L C +SD +R + LTSL F
Sbjct: 336 LLELDLTENWVTDEGCAALANCGQIQKLKLASCRCVSD-----VRWICALTSLRFLDLSK 390
Query: 114 -----------------RRNNAITAQGMK--AFA-GLINLVKLDLERCTRIHGGLVNLKG 153
+ + G+K +F GL++L LDL + G +L+
Sbjct: 391 THVRSADLQLLTMCQRLEELHVASCSGVKDASFVEGLLSLGHLDLTDTSIKDAGTRSLRK 450
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEG 213
L L+++ C +TD ++ + L NL +L + ++V D+ I L KL +L+L
Sbjct: 451 CTALTFLSLQDCRFLTD--IQFVEPLRNLLNLNLEGTEVVDANIIPLMHCTKLEVLSLRH 508
Query: 214 CP--VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV- 270
C CL L AL SL +L+ ++D+G S+ SL+ ++L ++ CL+
Sbjct: 509 CLFLTDVRCLRELKALKSL---DLSGTYVTDEGVSDVSQCISLERIDL-----SECCLIT 560
Query: 271 HLKGLTNLESLN---------LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS 321
H + L L +L LD G+G G V + + K ++GS GL
Sbjct: 561 HFEFLRPLTALRHVIADRMNVLDVTGLGGSGSVEGVSIADCK-------RLGSMGLLEAP 613
Query: 322 GLTNLESINLSFTGISDGSLRK-LAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDL 379
L +L +L + I+D + L SL+ LNL + IT+ L+A+ L LT L +
Sbjct: 614 RLLDL---SLKKSAITDSGIHSVLLRCHSLRRLNLQNCTSITE--LSAVAQLPSLTELLV 668
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGG-GLTDAG----LTGLVSLNVSNSRITSAGLRHL 434
+IT+ A++ L L++ +TD L LV L++S + +TS G+ L
Sbjct: 669 RNMKITNKSVAFVARCATLEKLQMVECVEITDVNSLKYLHRLVELDLSRTSVTSGGIVGL 728
Query: 435 KPLKNLRSLTLESCK 449
NL+ L L C+
Sbjct: 729 ARCYNLKKLNLSGCR 743
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 183/421 (43%), Gaps = 73/421 (17%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
S+L ++ L + +++ +++L +C +L+ + N C + LE L L LT LS N
Sbjct: 193 SNLRNLTLCNTPLSEVMMLYLSECVSLERVVVNSCRGLR--SLECLSSLQRLTELSLL-N 249
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
IT +G+ AF + RC + + L MKL+ +N L
Sbjct: 250 MGITEEGL-AF----------ISRCNSLRH--IQLDNCMKLQGINC-------------L 283
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
L L++L +S ++V+D GI L L+ L L L ++ ++ + L L L+L
Sbjct: 284 GSLIGLRTLSVSRNRVSDDGIRSLSNLRNLEQLRLVSFNRLSS-VEPVLCLDKLLELDLT 342
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
++D+GC + G ++ L L + + + LT+L L+L + L L
Sbjct: 343 ENWVTDEGCAALANCGQIQKLKLASCRCVSD-VRWICALTSLRFLDLSKTHVRSADLQLL 401
Query: 297 TGLCNLKCLELSDTQVGS-SGLRHLS---GLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
T C L + V S SG++ S GL +L ++L+ T I D R L ++L
Sbjct: 402 T-----MCQRLEELHVASCSGVKDASFVEGLLSLGHLDLTDTSIKDAGTRSLRKCTALTF 456
Query: 353 LNL-DARQITDTGL-------------------AALTSLTGLTHLDLFGAR----ITDSG 388
L+L D R +TD A + L T L++ R +TD
Sbjct: 457 LSLQDCRFLTDIQFVEPLRNLLNLNLEGTEVVDANIIPLMHCTKLEVLSLRHCLFLTD-- 514
Query: 389 AAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSA------GLRHLKPLKNLRS 442
LR K L+SL++ G +TD G++ VS +S RI + L+PL LR
Sbjct: 515 VRCLRELKALKSLDLSGTYVTDEGVSD-VSQCISLERIDLSECCLITHFEFLRPLTALRH 573
Query: 443 L 443
+
Sbjct: 574 V 574
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 157/358 (43%), Gaps = 67/358 (18%)
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS----CSKVTDSGIAYLKGLQKLTLLNL 211
+L +L ++ NC ++S++ L G+T++ S +I+ S SG+ L L L L L
Sbjct: 144 ELRALTVQ--NCFSESEV-ILRGVTSILSNRITEKREFSTFYISGVTNLGVLSNLRNLTL 200
Query: 212 EGCPVTAACLDSLSALGSLFYLNLNRCQ--LSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
P++ + LS SL + +N C+ S + ++ L +LN+G IT+E L
Sbjct: 201 CNTPLSEVMMLYLSECVSLERVVVNSCRGLRSLECLSSLQRLTELSLLNMG---ITEEGL 257
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
+ +L + LD+C + +G+ L L L+ L +S +V G+R LS L NLE +
Sbjct: 258 AFISRCNSLRHIQLDNC-MKLQGINCLGSLIGLRTLSVSRNRVSDDGIRSLSNLRNLEQL 316
Query: 330 NL-SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALT------------------- 369
L SF +S S+ + L L L+L +TD G AAL
Sbjct: 317 RLVSFNRLS--SVEPVLCLDKLLELDLTENWVTDEGCAALANCGQIQKLKLASCRCVSDV 374
Query: 370 ----SLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG-GGLTDA----GLTGLVSLN 420
+LT L LDL + + L + L L + G+ DA GL L L+
Sbjct: 375 RWICALTSLRFLDLSKTHVRSADLQLLTMCQRLEELHVASCSGVKDASFVEGLLSLGHLD 434
Query: 421 VSNSRITSAGLRHLK-----------------------PLKNLRSLTLESCKVTANDI 455
++++ I AG R L+ PL+NL +L LE +V +I
Sbjct: 435 LTDTSIKDAGTRSLRKCTALTFLSLQDCRFLTDIQFVEPLRNLLNLNLEGTEVVDANI 492
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 31/225 (13%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
+L S+DLSG+ VTD G+ + C +L+ +D + C I+ E LR L+ L + R N
Sbjct: 523 ALKSLDLSGTYVTDEGVSDVSQCISLERIDLSECCLITH--FEFLRPLTALRHVIADRMN 580
Query: 118 AITAQGMKAFAGLINLVKLDLERC-----------------------TRIHGGLVNLKGL 154
+ G+ + + D +R + IH L+ L
Sbjct: 581 VLDVTGLGGSGSVEGVSIADCKRLGSMGLLEAPRLLDLSLKKSAITDSGIHSVLLRCHSL 640
Query: 155 MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC 214
+ LN++ NC + +++ ++ L +L L + K+T+ +A++ L L + C
Sbjct: 641 RR---LNLQ--NCTSITELSAVAQLPSLTELLVRNMKITNKSVAFVARCATLEKLQMVEC 695
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
V ++SL L L L+L+R ++ G ++ +LK LNL
Sbjct: 696 -VEITDVNSLKYLHRLVELDLSRTSVTSGGIVGLARCYNLKKLNL 739
>gi|343421641|emb|CCD18751.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 518
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 162/378 (42%), Gaps = 62/378 (16%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISD----------------GGLEHLRGLSNLTSLS 112
VTD L L +L L+ C +++D G +RGL+ L SL
Sbjct: 144 VTDDFLCSLTTSGSLTHLNLTECSRLTDVEPLASIKTLEQVNLSGSFPGVRGLAALGSLP 203
Query: 113 FRR-----NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNI---KW 164
R + A+T +K + LV+L L C R L ++ L+K+ SL +
Sbjct: 204 RLRELNLKHTAVTDDCLKTLSASKTLVRLFLVDCRR----LTDVTPLVKISSLQVVDLSD 259
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
C+ IT M L+ L +L ++ + +TD + L Q L L+++ C + L +
Sbjct: 260 CSGITKG-MGGFGTLSGLYALSLTGTALTDEQLQELCASQSLESLSIKRCKL----LTDV 314
Query: 225 SALG---SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL--------- 272
LG +L L+++ C G FS + L+ L + F +T+ECL +
Sbjct: 315 GVLGFVTTLRELDMSECDGVARGFCSFSALRELRSLYMTFTCVTNECLCEISKCPQLVKL 374
Query: 273 -----KGLTN---------LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLR 318
K LT+ LE LN++ C ++GL L GL L+ L +S T VG+ LR
Sbjct: 375 SVAGCKKLTDISCLSQVHTLEDLNVNMCEHIEDGLGVLGGLEELRTLRMSFTAVGNDELR 434
Query: 319 HLSGLTNLESINLS-FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
+ LE L I+D S LA SL LNLD Q TG+ L L L +
Sbjct: 435 LVCKSKTLERSELEGCERITDVS--ALAVAQSLMFLNLDRCQKVVTGVGELGKLPALRVV 492
Query: 378 DLFGARITDSGAAYLRNF 395
L G +T+ L+ +
Sbjct: 493 SLQGVSVTEDDMKSLKMY 510
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 175/408 (42%), Gaps = 60/408 (14%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW 164
+S+L ++ +AI G F + L L L R L +L L LN+
Sbjct: 108 MSSLEEVALHNASAIVHIG--KFGRMPCLRVLTLHRVGVTDDFLCSLTTSGSLTHLNLTE 165
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
C+ +TD ++PL+ + L+ + +S S G+A L L +L LNL+ VT CL +L
Sbjct: 166 CSRLTD--VEPLASIKTLEQVNLSGSFPGVRGLAALGSLPRLRELNLKHTAVTDDCLKTL 223
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL-----------GF------------ 261
SA +L L L C+ D KI SL+V++L GF
Sbjct: 224 SASKTLVRLFLVDCRRLTD-VTPLVKISSLQVVDLSDCSGITKGMGGFGTLSGLYALSLT 282
Query: 262 -NEITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
+TDE L L +LESL++ C + D G++ L+ L++S+ + G
Sbjct: 283 GTALTDEQLQELCASQSLESLSIKRCKLLTDVGVLGFVT--TLRELDMSECDGVARGFCS 340
Query: 320 LSGLTNLESINLSFTGISDGSL-----------------RKLAGLS------SLKSLNLD 356
S L L S+ ++FT +++ L +KL +S +L+ LN++
Sbjct: 341 FSALRELRSLYMTFTCVTNECLCEISKCPQLVKLSVAGCKKLTDISCLSQVHTLEDLNVN 400
Query: 357 ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG-GGLTD----A 411
+ + GL L L L L + + + + K L E+ G +TD A
Sbjct: 401 MCEHIEDGLGVLGGLEELRTLRMSFTAVGNDELRLVCKSKTLERSELEGCERITDVSALA 460
Query: 412 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQ 459
L+ LN+ + G+ L L LR ++L+ VT +D+K L+
Sbjct: 461 VAQSLMFLNLDRCQKVVTGVGELGKLPALRVVSLQGVSVTEDDMKSLK 508
>gi|224124626|ref|XP_002330070.1| predicted protein [Populus trichocarpa]
gi|222871495|gb|EEF08626.1| predicted protein [Populus trichocarpa]
Length = 1126
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 170/358 (47%), Gaps = 60/358 (16%)
Query: 53 ASQG-SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI---QISDGGLEHLRGLSNL 108
AS G S+L S+DLS + +T SGL L S LQ L+ N + Q +D + G S+L
Sbjct: 131 ASTGFSALKSLDLSDNQLTGSGLKVLS--SRLQKLE-NLHLSGNQCNDSIFSSITGFSSL 187
Query: 109 TSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCI 168
SL N +T G+K + L KLE+L++ C
Sbjct: 188 KSLDLSY-NELTGSGLKVLS-----------------------SRLQKLENLHLSGNQC- 222
Query: 169 TDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKG-LQKLTLLNLEGCPVTAACLDSLSAL 227
DS ++G ++LKSL +S ++VT SG+ L L+KL L+L + SLS
Sbjct: 223 NDSIFSSITGFSSLKSLDLSYNEVTGSGLKVLSSKLKKLENLDLSDNQCNDSIFSSLSGF 282
Query: 228 GSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
SL YLNL++ QL+ + I S +VL + GL NLE L+L S
Sbjct: 283 SSLKYLNLSQNQLTGSS----TGINSFQVL--------------VSGLRNLEELHLYSNK 324
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSFTGISDGSL-RKLA 345
+ + L +L+G LK L+LSD GS+G L+GL NLE++ L T + L L
Sbjct: 325 LNNNILSSLSGFSTLKSLDLSDNMFTGSTG---LNGLRNLETLYLGNTDFKESILIESLG 381
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
L SLK+L+ T G L + + L + L + + A++LRN L +L++
Sbjct: 382 ALPSLKTLDASYSNFTHFG-KGLCNSSSLEEVFLDDSSLP---ASFLRNIGPLSTLKV 435
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 124/253 (49%), Gaps = 34/253 (13%)
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKG-LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
+G + LKSL +S +++T SG+ L LQKL L+L G
Sbjct: 133 TGFSALKSLDLSDNQLTGSGLKVLSSRLQKLENLHLSG---------------------- 170
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG-LTNLESLNLDSCGIGDEGLV 294
N+C +D + SLK L+L +NE+T L L L LE+L+L D
Sbjct: 171 NQC--NDSIFSSITGFSSLKSLDLSYNELTGSGLKVLSSRLQKLENLHLSGNQCNDSIFS 228
Query: 295 NLTGLCNLKCLELSDTQVGSSGLRHLSG-LTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
++TG +LK L+LS +V SGL+ LS L LE+++LS +D L+G SSLK L
Sbjct: 229 SITGFSSLKSLDLSYNEVTGSGLKVLSSKLKKLENLDLSDNQCNDSIFSSLSGFSSLKYL 288
Query: 354 NLDARQIT--DTGLAAL----TSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGG 407
NL Q+T TG+ + + L L L L+ ++ ++ + L F L+SL++
Sbjct: 289 NLSQNQLTGSSTGINSFQVLVSGLRNLEELHLYSNKLNNNILSSLSGFSTLKSLDLSDNM 348
Query: 408 LT-DAGLTGLVSL 419
T GL GL +L
Sbjct: 349 FTGSTGLNGLRNL 361
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 15/211 (7%)
Query: 251 IGSLKVLNLGFNEITDECLVHLKG-LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSD 309
+LK L+L N++T L L L LE+L+L D ++TG +LK L+LS
Sbjct: 135 FSALKSLDLSDNQLTGSGLKVLSSRLQKLENLHLSGNQCNDSIFSSITGFSSLKSLDLSY 194
Query: 310 TQVGSSGLRHLSG-LTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
++ SGL+ LS L LE+++LS +D + G SSLKSL+L ++T +GL L
Sbjct: 195 NELTGSGLKVLSSRLQKLENLHLSGNQCNDSIFSSITGFSSLKSLDLSYNEVTGSGLKVL 254
Query: 369 TS-LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRIT 427
+S L L +LDL + DS + L F +L+ L + LT + TG+ S ++
Sbjct: 255 SSKLKKLENLDLSDNQCNDSIFSSLSGFSSLKYLNLSQNQLTGSS-TGINSF-----QVL 308
Query: 428 SAGLRHLKPLKNLRSLTLESCKVTANDIKRL 458
+GLR NL L L S K+ N + L
Sbjct: 309 VSGLR------NLEELHLYSNKLNNNILSSL 333
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 147/340 (43%), Gaps = 45/340 (13%)
Query: 49 MDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRG-LSN 107
+ V++S+ L ++ LSG+ DS + S+L+SLD ++ +++ GL+ L L
Sbjct: 202 LKVLSSRLQKLENLHLSGNQCNDSIFSSITGFSSLKSLDLSYN-EVTGSGLKVLSSKLKK 260
Query: 108 LTSLSFRRNN----AITAQGMKAFAGLINLVKLDLE-RCTRIHGGLVNLKGLMKLESLNI 162
L +L N ++ + +NL + L T I+ V + GL LE L++
Sbjct: 261 LENLDLSDNQCNDSIFSSLSGFSSLKYLNLSQNQLTGSSTGINSFQVLVSGLRNLEELHL 320
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
+ N + ++ + LSG + LKSL +S + T G L GL+ L L L + L
Sbjct: 321 -YSNKLNNNILSSLSGFSTLKSLDLSDNMFT--GSTGLNGLRNLETLYLGNTDFKESIL- 376
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-KGLTN---L 278
+ +LG+L SLK L+ ++ T H KGL N L
Sbjct: 377 -IESLGAL---------------------PSLKTLDASYSNFT-----HFGKGLCNSSSL 409
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSS-GLRHLSGLTNLESINLSFTGIS 337
E + LD + L N+ L LK L L+ S+ + L NLE + LS +
Sbjct: 410 EEVFLDDSSLPASFLRNIGPLSTLKVLSLAGVDFNSTLPAQGWCELKNLEELYLSGNNLK 469
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 377
L LS L+ L+L Q+ G A + L+ L L
Sbjct: 470 GVLPPCLGNLSFLQILDLSHNQL--EGNIAFSYLSHLKQL 507
>gi|405954703|gb|EKC22070.1| F-box/LRR-repeat protein 14 [Crassostrea gigas]
Length = 403
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 160/304 (52%), Gaps = 44/304 (14%)
Query: 202 GLQKLTLLNLEGCPVTAACLDSLSALGSLF--------YLNLNRC-QLSDDGCEKFSK-I 251
G+ + LNL GC V ALG F LNL+ C Q++D+ + ++ +
Sbjct: 95 GIPNVETLNLSGCFVVTD-----HALGHAFSQDLPCMTVLNLSLCKQITDNSLGRIAQYL 149
Query: 252 GSLKVLNLG-FNEITDECLVHLK-GLTNLESLNLDSC-GIGDEGLVNLTG--------LC 300
+L+VL LG + IT+ L+ + GL L++LNL SC I D G+ +L G
Sbjct: 150 TNLEVLELGGCSNITNTGLLLIAWGLRKLKTLNLRSCRHISDVGIGHLAGNSPNAAAGTL 209
Query: 301 NLKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSFTG-ISDGSLRKLAGLSSLKSLNLDA 357
++ L L D Q + L+HLS GL NL+++NLSF G ++D ++ L+ + +++ +NL +
Sbjct: 210 EIENLGLQDCQKLTDLSLKHLSCGLVNLKTLNLSFCGSVTDSGVKFLSKMQTMREINLRS 269
Query: 358 -RQITDTGLAALTS-LTGLTHLDL-FGARITDSGAAYL-RNFKNLRSLEICGGGLTDAGL 413
I+D GL L + +T LD+ F ++ D G +L + +LR++ + ++D GL
Sbjct: 270 CDNISDVGLGYLAEGGSRITSLDVSFCDKVGDEGLVHLAQGLFSLRNISLSACNISDEGL 329
Query: 414 TGLV-------SLNVSNS-RITSAGLRHLK-PLKNLRSLTLESC-KVTANDIKR-LQSRD 462
LV +LN+ RIT GL + LKNL+S+ L C ++T ++R +Q R
Sbjct: 330 NRLVNTLQDITTLNIGQCVRITDKGLSLIADHLKNLQSIDLYGCTRITTVGLERIMQLRG 389
Query: 463 LPNL 466
L L
Sbjct: 390 LTTL 393
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 194/412 (47%), Gaps = 60/412 (14%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
+L++ S V D G + + C + + +N C+ HLR R N +
Sbjct: 19 VLTIIFSYLSVRDKGRVA-QVCVKWRDVAYNRCVWRGVCAKLHLR----------RANPS 67
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-- 176
+ +K G+ + L L+R R + G+ +E+LN+ C +TD +
Sbjct: 68 LFPSLVKR--GIKRVQILSLKRSLR-----DVVVGIPNVETLNLSGCFVVTDHALGHAFS 120
Query: 177 SGLTNLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGCP--VTAACLDSLSALGSLFY 232
L + L +S C ++TD+ + + + L L +L L GC L L L
Sbjct: 121 QDLPCMTVLNLSLCKQITDNSLGRIAQYLTNLEVLELGGCSNITNTGLLLIAWGLRKLKT 180
Query: 233 LNLNRCQ-LSDDGCEKF------SKIGSLKVLNLGFNE---ITDECLVHLK-GLTNLESL 281
LNL C+ +SD G + G+L++ NLG + +TD L HL GL NL++L
Sbjct: 181 LNLRSCRHISDVGIGHLAGNSPNAAAGTLEIENLGLQDCQKLTDLSLKHLSCGLVNLKTL 240
Query: 282 NLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESINLSFT-GIS 337
NL CG + D G+ L+ + ++ + L S + GL +L+ G + + S+++SF +
Sbjct: 241 NLSFCGSVTDSGVKFLSKMQTMREINLRSCDNISDVGLGYLAEGGSRITSLDVSFCDKVG 300
Query: 338 DGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITDSGAAYLR- 393
D L LA GL SL++++L A I+D GL L +L +T L++ RITD G + +
Sbjct: 301 DEGLVHLAQGLFSLRNISLSACNISDEGLNRLVNTLQDITTLNIGQCVRITDKGLSLIAD 360
Query: 394 NFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 445
+ KNL+S+++ G +RIT+ GL + L+ L +L L
Sbjct: 361 HLKNLQSIDLYGC-----------------TRITTVGLERIMQLRGLTTLNL 395
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 141/279 (50%), Gaps = 42/279 (15%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLK-DCSNLQSLDFNFCIQISDGGLEH 101
+ D + IA ++L ++L G S++T++GL+ + L++L+ C ISD G+ H
Sbjct: 137 ITDNSLGRIAQYLTNLEVLELGGCSNITNTGLLLIAWGLRKLKTLNLRSCRHISDVGIGH 196
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK----GLMKL 157
L G S A AG + + L L+ C ++ ++LK GL+ L
Sbjct: 197 LAGNSP-----------------NAAAGTLEIENLGLQDCQKLTD--LSLKHLSCGLVNL 237
Query: 158 ESLNIKWCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCP 215
++LN+ +C +TDS +K LS + ++ + + SC ++D G+ YL +G ++T L++ C
Sbjct: 238 KTLNLSFCGSVTDSGVKFLSKMQTMREINLRSCDNISDVGLGYLAEGGSRITSLDVSFCD 297
Query: 216 VTA--ACLDSLSALGSLFYLNLNRCQLSDDGCEKF-SKIGSLKVLNLG-FNEITDECLV- 270
+ L SL ++L+ C +SD+G + + + + LN+G ITD+ L
Sbjct: 298 KVGDEGLVHLAQGLFSLRNISLSACNISDEGLNRLVNTLQDITTLNIGQCVRITDKGLSL 357
Query: 271 ---HLKGLTNLESLNLDSC----GIGDEGLVNLTGLCNL 302
HLK NL+S++L C +G E ++ L GL L
Sbjct: 358 IADHLK---NLQSIDLYGCTRITTVGLERIMQLRGLTTL 393
>gi|440794154|gb|ELR15325.1| leucine rich repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 598
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 192/430 (44%), Gaps = 41/430 (9%)
Query: 2 LPRDISQQIFNELVYSRCLTEVSLEAFRDCALQDLCLGQYPG-VNDKWMDVIASQGSSLL 60
LP ++ QI N L + LT + F + +L L L + G + D ++ +A + +
Sbjct: 49 LPDHLALQILNALALRKKLTLSNFVMFLNSSLVQLDLHECGGYITDHFIRQVAKRAQRIR 108
Query: 61 SVDLSGS-DVTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
++L+ +T+ ++ L + LQS+D C ++ D LE + + +TSL R A
Sbjct: 109 RLNLATCFKITNPAVLDLARRLRCLQSVDLTGCNKLQDSALEAIAENTGITSL---RLGA 165
Query: 119 ITAQG----MKAFAGLINLVKLDLERCTRI--HGGLVNLKGLMKLESLNIKWCNCITDSD 172
+T G ++ A L L +LDL C RI +L++L++ C ++D+
Sbjct: 166 VTKLGDSALLRVAARLAGLEELDLTHCPRITDRSATQLFDRCPQLKTLSLGGCWEVSDTS 225
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGL-QKLTLLNLEGCP--VTAACLDSLSALGS 229
+ NL+ L ++ S + ++G+ +KG +KL LNLEGC A LD
Sbjct: 226 FSRIKLQVNLEHLDVAVSFIGNAGLQAIKGTCKKLKYLNLEGCANITDEAFLDDTPFGEH 285
Query: 230 LFYLNLNRC-QLSDDGC-----EKFSKIGSLKVLNLGFNEITDECLVHLKG-LTNLESLN 282
L LNL C ++ G ++ S SL+ L+L +TD + + L ++ SLN
Sbjct: 286 LETLNLAGCSNITARGIIGLFLDQISAPESLRTLHLP-QTLTDGAFIFITNQLRHVVSLN 344
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
++SC E L L +V ++ R + N S ++ +G G L
Sbjct: 345 IESCTELTEKAFKSYPLIALD-------EVRATPRRQRAADINKMSEDID-SGEIPGDL- 395
Query: 343 KLAGLSSLKSLNLDA-RQITDTGLAALTSL-------TGLTHLDLFG-ARITDSGAAYLR 393
+ LK LN ++D LA L + L L L G R++D G +LR
Sbjct: 396 CFPLMPRLKKLNCKGCESLSDVALACLAGVGDEEKHEVALEELILEGCERVSDDGLHHLR 455
Query: 394 NFKNLRSLEI 403
NLR L++
Sbjct: 456 QCANLRVLDL 465
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 143/329 (43%), Gaps = 46/329 (13%)
Query: 20 LTEVSLEAF-RDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHL 77
L + +LEA + + L LG + D + +A++ + L +DL+ +TD L
Sbjct: 144 LQDSALEAIAENTGITSLRLGAVTKLGDSALLRVAARLAGLEELDLTHCPRITDRSATQL 203
Query: 78 KD-CSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVK- 135
D C L++L C ++SD ++ NL L + I G++A G +K
Sbjct: 204 FDRCPQLKTLSLGGCWEVSDTSFSRIKLQVNLEHLDVAVS-FIGNAGLQAIKGTCKKLKY 262
Query: 136 LDLERCTRI--HGGLVNLKGLMKLESLNIKWCNCITDSD-----MKPLSGLTNLKSLQIS 188
L+LE C I L + LE+LN+ C+ IT + +S +L++L +
Sbjct: 263 LNLEGCANITDEAFLDDTPFGEHLETLNLAGCSNITARGIIGLFLDQISAPESLRTLHLP 322
Query: 189 CSKVTDSGIAYLKG-LQKLTLLNLEGC-----------PVTAACLDSLSALG-------- 228
+TD ++ L+ + LN+E C P+ A LD + A
Sbjct: 323 -QTLTDGAFIFITNQLRHVVSLNIESCTELTEKAFKSYPLIA--LDEVRATPRRQRAADI 379
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTN-------LES 280
+ +++ ++ D C F + LK LN G ++D L L G+ + LE
Sbjct: 380 NKMSEDIDSGEIPGDLC--FPLMPRLKKLNCKGCESLSDVALACLAGVGDEEKHEVALEE 437
Query: 281 LNLDSCG-IGDEGLVNLTGLCNLKCLELS 308
L L+ C + D+GL +L NL+ L+LS
Sbjct: 438 LILEGCERVSDDGLHHLRQCANLRVLDLS 466
>gi|448825651|ref|YP_007418582.1| putative F-box/LRR-repeat protein [Megavirus lba]
gi|444236836|gb|AGD92606.1| putative F-box/LRR-repeat protein [Megavirus lba]
Length = 559
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 179/420 (42%), Gaps = 102/420 (24%)
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC 165
N+ S++ R N IT + ++ G+ K++L C I G K L E++N+ C
Sbjct: 65 QNIKSINLSRTN-ITDKELQFLCGI---TKINLYCCKNITGS--GFKYLQLAENINLSGC 118
Query: 166 NCITDSDMKPLSGL-----------------------------------TNLKSLQISCS 190
N I S+++ LS + T +K + +S +
Sbjct: 119 NQIIGSELRYLSNIVKINLSRTNIDDQAIEYLVFGQKIDGNKEILIQPQTKIKFIDLSFT 178
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLF-------------YLN-- 234
K+T+ I+YL ++ ++N+ C VT++CL L + ++ YLN
Sbjct: 179 KITNYSISYLSNVK---IININSCEFVTSSCLQYLHNITHIYMNTYNVIIGDNIKYLNKI 235
Query: 235 ----LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL---ESLNLDSCG 287
LN LSD+ E I L++ N ++IT + L LK L L S N+D+
Sbjct: 236 KLLVLNDHTLSDNQLEYIQNIEHLEIYNAS-DKITHQGLQKLKNLKILSLRHSYNIDTIS 294
Query: 288 IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAG 346
+ + L N C +++D+ L L +LE+INLS+ I+D L+ L
Sbjct: 295 FIPTNKIRILDLKN--CHQVTDSS--------LQYLPHLETINLSWCYKITDNGLKNLQH 344
Query: 347 LSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICG 405
++ ++NL +ITD GL L+ + + +ITD G +L+N KN++ +
Sbjct: 345 VT---NINLSGCHRITDNGLVYLSKADSIN--ISYCIKITDDGLKHLQNVKNIK---LGY 396
Query: 406 GGLTDAGLTGLVSLNVSNSR-----------ITSAGLRHLKPLKNLRSLTLESCKVTAND 454
+D + + S + IT GL + L N +SL+L C+ +D
Sbjct: 397 HSTSDIYMIEYFEYDFSKEKYIKEIKNTKQLITDIGLSY---LINTQSLSLLYCENITDD 453
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 161/343 (46%), Gaps = 40/343 (11%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
L+ ++D+ L ++++ +L+ +N +I+ GL+ L+ NL LS R + I
Sbjct: 240 LNDHTLSDNQLEYIQNIEHLEI--YNASDKITHQGLQKLK---NLKILSLRHSYNIDTI- 293
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+F + LDL+ C ++ +L+ L LE++N+ WC ITD+ +K L +TN+
Sbjct: 294 --SFIPTNKIRILDLKNCHQVTDS--SLQYLPHLETINLSWCYKITDNGLKNLQHVTNIN 349
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGS--LFYLNLNRCQL 240
C ++TD+G+ Y L K +N+ C +T L L + + L Y + + +
Sbjct: 350 LS--GCHRITDNGLVY---LSKADSINISYCIKITDDGLKHLQNVKNIKLGYHSTSDIYM 404
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGL 299
+ FSK +K + ITD + L L N +SL+L C I D+GL L+
Sbjct: 405 IEYFEYDFSKEKYIKEIKNTKQLITD---IGLSYLINTQSLSLLYCENITDDGLQYLSK- 460
Query: 300 CNLKCLELSD-TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN---- 354
+K + +++ ++ +GL++LS + + INLS + SL+ L S +K N
Sbjct: 461 --IKSISINNCPKIIGTGLKYLS---DCQKINLSNVRLCRSSLKYLNLFSKIKINNNFTD 515
Query: 355 ------LDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
A++I +G +T GL HL +Y
Sbjct: 516 DDLKYLYRAKKIKLSGFNKITK-NGLKHLHQVDKLFIQKSISY 557
>gi|261334051|emb|CBH17045.1| T. brucei spp.-specific protein [Trypanosoma brucei gambiense DAL972]
Length = 1399
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 174/379 (45%), Gaps = 25/379 (6%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
++ D LE + +L SL+ N IT + A + L L +L++ C RI G +
Sbjct: 952 RVCDIWLEGISQSKSLQSLNVSNCNYIT--DISALSSLSTLEELNVNCCDRIRKGWEAFE 1009
Query: 153 GLMKLE--SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
L +L +L++ W +T+ ++ LSG NL++L++ C + S I + ++ L L
Sbjct: 1010 ALTRLRVATLSVTW---VTNEGIRLLSGCKNLRNLELYCCRDV-SNIEPINNIKSLEELT 1065
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL-GFNEITDECL 269
++ C L + L L L L + Q + + SL L + G E+ D
Sbjct: 1066 IQNCHNINEGLLKVGMLPRLRVLVLRKLQSTYFSLSSLGESKSLVKLTIEGPEELCD--- 1122
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTG----LCNLKCLELSDTQVGSSGLRHLSGLTN 325
+K ++N+ +L GD L+N G L L L LS +G++ + + +
Sbjct: 1123 --IKLISNIATLKELKIAHGDR-LLNDVGDLGKLPWLHVLTLSHFNMGNTCFESVCKIRS 1179
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L+S++++ + + ++ L++L+ LNL +G ALT+L L L+L R+T
Sbjct: 1180 LKSLDITHS-FELPDIYHISNLTALEELNLSGCYHIISGWEALTALPRLRVLNLSSTRVT 1238
Query: 386 DS-GAAYLRNFKNLRSLEICGGGLTDAG----LTGLVSLNVSNSRITSAGLRHLKPLKNL 440
S G Y+ K+L +L + +TDA + L L++ + G L L L
Sbjct: 1239 TSYGGYYISRCKSLITLNLESCDMTDASCLADIKTLEELHIGKCEELTRGFSALFTLPQL 1298
Query: 441 RSLTLESCKVTANDIKRLQ 459
R L L +T D++ +Q
Sbjct: 1299 RILNLMDSLITDEDLREIQ 1317
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 185/451 (41%), Gaps = 77/451 (17%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAI---- 119
LS + + D + H+ +C +L +L+ FC I+D + LSN+T L R N
Sbjct: 804 LSNTRINDENIRHISECKSLNTLNLAFCNDITD-----ITALSNITML--RELNIDWCFN 856
Query: 120 TAQGMKAFAGLINLVKLDLERC------TRIHGGLVNLKGLMKLESLNIKWCNCI----- 168
+G++A L L +LD ++C + + K L+KL N + C+
Sbjct: 857 IEKGVEALGKLPKLRELDAKKCGTSVRWMQQYPYNTLFKSLVKLNLENGRESFCVGTLSS 916
Query: 169 -------------TDSDMKPLSGLTNLKSLQISCSKVTD---SGIAYLKGLQKLTLLNLE 212
+ P+S L L+ L + +V D GI+ K LQ L N+
Sbjct: 917 TAIVEELLLGRACEPYHLPPISSLRRLRVLNLDDGRVCDIWLEGISQSKSLQSL---NVS 973
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
C + +LS+L +L LN+N C G E F + L+V L +T+E + L
Sbjct: 974 NCNYITD-ISALSSLSTLEELNVNCCDRIRKGWEAFEALTRLRVATLSVTWVTNEGIRLL 1032
Query: 273 KGLTN-----------------------LESLNLDSCGIGDEGLVNLTGLCNLKCLELSD 309
G N LE L + +C +EGL+ + L L+ L L
Sbjct: 1033 SGCKNLRNLELYCCRDVSNIEPINNIKSLEELTIQNCHNINEGLLKVGMLPRLRVLVLRK 1092
Query: 310 TQVGSSGLRHLSGLTNLESINLSFTGISD-GSLRKLAGLSSLKSLNLDA--RQITDTGLA 366
Q L L +L + L+ G + ++ ++ +++LK L + R + D G
Sbjct: 1093 LQSTYFSLSSLGESKSL--VKLTIEGPEELCDIKLISNIATLKELKIAHGDRLLNDVG-- 1148
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG-GLTD----AGLTGLVSLNV 421
L L L L L + ++ + ++L+SL+I L D + LT L LN+
Sbjct: 1149 DLGKLPWLHVLTLSHFNMGNTCFESVCKIRSLKSLDITHSFELPDIYHISNLTALEELNL 1208
Query: 422 SNSRITSAGLRHLKPLKNLRSLTLESCKVTA 452
S +G L L LR L L S +VT
Sbjct: 1209 SGCYHIISGWEALTALPRLRVLNLSSTRVTT 1239
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 177/404 (43%), Gaps = 68/404 (16%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ ++L +DL+ +++ DS + + C+ L L + C I D + L+ L L+
Sbjct: 225 SRLTNLKCLDLNSTNIDDSCIGEISACAKLSKLSVSECNNIIDA--TPISQLAALEELNL 282
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
N IT +G+ L+ L LDL + L +L LE LN+ +C I +++
Sbjct: 283 NSNCHIT-KGIGTLGMLLRLRMLDLSGVSVEDNFLKDLCDCGPLERLNLSYC--IQLTNI 339
Query: 174 KPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
PLS T ++ L ++ C ++T GI + L KL +L+++G ++ LDS+ GSL
Sbjct: 340 NPLSNATAIEELNLNGCRRIT-RGIGVVWALPKLRVLHMKGVHLSEPSLDSVGTGGSLVK 398
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
++L+ C GF ++T L + LE LN+ C G
Sbjct: 399 VSLDNCA--------------------GFGDMT-----LLSSIVTLEELNIQKCADIISG 433
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
+ L L L+ L + + + S L FTGI G+ + L
Sbjct: 434 VCCLGTLPYLRVLNIKEAHISS----------------LDFTGI--GASKSL-------- 467
Query: 353 LNLDARQITD-TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
L L IT + + AL ++ L L L G D+G L N L+ L++ G
Sbjct: 468 LQLTLESITGLSNVEALANILTLEKLSLLGCNGIDAGIGCLGNLPQLKVLDLSGTNTDSD 527
Query: 412 GLTGL------VSLNVSNS-RITSAGLRHLKPLKNLRSLTLESC 448
L GL VSLN+S+ ++TS + H+ L+ L L L C
Sbjct: 528 SLRGLCVSQTIVSLNLSHCWKVTS--VFHISALETLNELNLSDC 569
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 128/509 (25%), Positives = 193/509 (37%), Gaps = 137/509 (26%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
LS + +TD + H C L +LD +FC ++ D + LSN+T+L
Sbjct: 590 LSNTHITDRDISHFSKCKELVTLDLSFCDELFD-----ITSLSNITTLE----------- 633
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC------------------ 165
L+L+ C++I GL L L +L LN+K
Sbjct: 634 -----------DLNLDNCSKIRKGLSVLGELPRLRVLNVKGVHLTNSVIGSLGNGKSFVK 682
Query: 166 ----NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPV----- 216
NC SD+ LS L+ LK L + SGI L L +L +L+L +
Sbjct: 683 LILDNCKGLSDVTFLSSLSTLKELNLHHCDAVTSGIGTLGRLLQLRVLDLGWTKIDNNSL 742
Query: 217 --TAAC-----------------LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
AC + ++++L +L LN++ C G F + L+V
Sbjct: 743 EDICACSSPLVSLNLSHCKEITSISAIASLNALEKLNIDNCCHVTSGWNVFGTLHQLRVA 802
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSCG-IGD-EGLVNLTGLCNL------------- 302
L I DE + H+ +L +LNL C I D L N+T L L
Sbjct: 803 VLSNTRINDENIRHISECKSLNTLNLAFCNDITDITALSNITMLRELNIDWCFNIEKGVE 862
Query: 303 ------KCLELSDTQVGSSGLRHLSGLT-----------NLESINLSF-------TGISD 338
K EL + G+S +R + NLE+ SF T I +
Sbjct: 863 ALGKLPKLRELDAKKCGTS-VRWMQQYPYNTLFKSLVKLNLENGRESFCVGTLSSTAIVE 921
Query: 339 G----------SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGAR-ITDS 387
L ++ L L+ LNLD ++ D L ++ L L++ ITD
Sbjct: 922 ELLLGRACEPYHLPPISSLRRLRVLNLDDGRVCDIWLEGISQSKSLQSLNVSNCNYITDI 981
Query: 388 GAAYLRNFKNLRSL------EICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLR 441
A L + L L I G LT L +S + +T+ G+R L KNLR
Sbjct: 982 SA--LSSLSTLEELNVNCCDRIRKGWEAFEALTRLRVATLSVTWVTNEGIRLLSGCKNLR 1039
Query: 442 SLTLESCKVTA-----NDIKRLQSRDLPN 465
+L L C+ + N+IK L+ + N
Sbjct: 1040 NLELYCCRDVSNIEPINNIKSLEELTIQN 1068
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 157/369 (42%), Gaps = 61/369 (16%)
Query: 133 LVKLDLERCTRIHGGLVNLKGL---MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISC 189
L++L LE T GL N++ L + LE L++ CN I D+ + L L LK L +S
Sbjct: 467 LLQLTLESIT----GLSNVEALANILTLEKLSLLGCNGI-DAGIGCLGNLPQLKVLDLSG 521
Query: 190 SKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS 249
+ + L Q + LNL C + +SAL +L LNL+ C + G E
Sbjct: 522 TNTDSDSLRGLCVSQTIVSLNLSHCWKVTSVFH-ISALETLNELNLSDCIRINAGWEALE 580
Query: 250 KIGSLKVLNLGFNEITDECLVH-----------------------LKGLTNLESLNLDSC 286
K+ L V L ITD + H L +T LE LNLD+C
Sbjct: 581 KLQQLHVAILSNTHITDRDISHFSKCKELVTLDLSFCDELFDITSLSNITTLEDLNLDNC 640
Query: 287 GIGDEGLVNLTGL-----CNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 341
+GL L L N+K + L+++ +GS G +G + ++ I + G+SD +
Sbjct: 641 SKIRKGLSVLGELPRLRVLNVKGVHLTNSVIGSLG----NGKSFVKLILDNCKGLSDVTF 696
Query: 342 RKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG------------A 389
L+ LS+LK LNL +G+ L L L LDL +I ++ +
Sbjct: 697 --LSSLSTLKELNLHHCDAVTSGIGTLGRLLQLRVLDLGWTKIDNNSLEDICACSSPLVS 754
Query: 390 AYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 449
L + K + S+ A L L LN+ N ++G L LR L + +
Sbjct: 755 LNLSHCKEITSISAI------ASLNALEKLNIDNCCHVTSGWNVFGTLHQLRVAVLSNTR 808
Query: 450 VTANDIKRL 458
+ +I+ +
Sbjct: 809 INDENIRHI 817
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 10/171 (5%)
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDS-GIAYLKGLQKL 206
+ ++ L LE LN+ C I S + L+ L L+ L +S ++VT S G Y+ + L
Sbjct: 1194 IYHISNLTALEELNLSGCYHII-SGWEALTALPRLRVLNLSSTRVTTSYGGYYISRCKSL 1252
Query: 207 TLLNLEGCPVT-AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
LNLE C +T A+CL + L L ++ +C+ G + L++LNL + IT
Sbjct: 1253 ITLNLESCDMTDASCLADIKTLEEL---HIGKCEELTRGFSALFTLPQLRILNLMDSLIT 1309
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
DE L ++ +E LNL C + L ++T + +K ++ D S G
Sbjct: 1310 DEDLREIQLSHTIEDLNLSYC----KELNDITPVRRIKSIKKMDLHRSSEG 1356
>gi|83629969|gb|ABC26646.1| internalin E [Listeria monocytogenes]
gi|85679293|gb|ABC72062.1| InlE [Listeria monocytogenes]
Length = 498
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 106/213 (49%), Gaps = 38/213 (17%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
LTNL L+++ +++TD ++ L L K+T L L G P L +SAL L
Sbjct: 94 LTNLSELELTDNQITD--VSPLANLTKITELGLSGNP-----LKDVSALAGL-------- 138
Query: 239 QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTG 298
SLK+L+L + +ITD + L GLTNL+ LNLD I D + L
Sbjct: 139 -------------KSLKMLHLIYTDITD--VTSLAGLTNLQELNLDINQITD--ISPLAA 181
Query: 299 LCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L NL+ L L TQV S L L+ L+ L +N +SD + LA LSSL + L
Sbjct: 182 LTNLQTLSLGYTQV--SDLTPLANLSKLTILNAENCKVSD--ISPLASLSSLTEVYLREN 237
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
QI+D ++ L ++ L+ ++L IT+ Y
Sbjct: 238 QISD--VSPLANIPNLSIIELTDQIITNQPVYY 268
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 36/189 (19%)
Query: 274 GLTNLESL----NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG-----LRHLSGLT 324
G+T +E + NL + D + +++ L NL + T++G SG + L+GL
Sbjct: 84 GITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI----TELGLSGNPLKDVSALAGLK 139
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI 384
+L+ ++L +T I+D + LAGL++L+ LNLD QITD ++ L +LT L L L ++
Sbjct: 140 SLKMLHLIYTDITD--VTSLAGLTNLQELNLDINQITD--ISPLAALTNLQTLSLGYTQV 195
Query: 385 TDSGAAYLRNFKNLRSLEICGG---GLTDAGLTGLVSLNVSNSRITSAGLRH-----LKP 436
+D L NL L I ++D ++ L SL S +T LR + P
Sbjct: 196 SD-----LTPLANLSKLTILNAENCKVSD--ISPLASL----SSLTEVYLRENQISDVSP 244
Query: 437 LKNLRSLTL 445
L N+ +L++
Sbjct: 245 LANIPNLSI 253
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 46/262 (17%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI 92
+Q + Q +N+ + D + + L L +DVTD + D +
Sbjct: 30 VQAAVIEQPTPINEIFTDPVVADNVKTL---LEKADVTDE----------VTQTDLDSIT 76
Query: 93 QIS--DGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL-DLERCTRIHGGLV 149
Q+S G+ + G+ LT+LS +T + + L NL K+ +L +
Sbjct: 77 QLSAKSAGITTIEGMQYLTNLSELE---LTDNQITDVSPLANLTKITELGLSGNPLKDVS 133
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD-SGIAYLKGLQ---- 204
L GL L+ L++ + + +D+ L+GLTNL+ L + +++TD S +A L LQ
Sbjct: 134 ALAGLKSLKMLHLIYTDI---TDVTSLAGLTNLQELNLDINQITDISPLAALTNLQTLSL 190
Query: 205 ---------------KLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS 249
KLT+LN E C V + + L++L SL + L Q+SD +
Sbjct: 191 GYTQVSDLTPLANLSKLTILNAENCKV--SDISPLASLSSLTEVYLRENQISD--VSPLA 246
Query: 250 KIGSLKVLNLGFNEITDECLVH 271
I +L ++ L IT++ + +
Sbjct: 247 NIPNLSIIELTDQIITNQPVYY 268
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 261 FNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
NEI + +V N+++L L+ + DE V T L ++ +LS G + + +
Sbjct: 41 INEIFTDPVVA----DNVKTL-LEKADVTDE--VTQTDLDSIT--QLSAKSAGITTIEGM 91
Query: 321 SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
LTNL + L+ I+D S LA L+ + L L + D ++AL L L L L
Sbjct: 92 QYLTNLSELELTDNQITDVS--PLANLTKITELGLSGNPLKD--VSALAGLKSLKMLHLI 147
Query: 381 GARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKP 436
ITD + L NL+ L + +TD A LT L +L++ ++++ L P
Sbjct: 148 YTDITDVTS--LAGLTNLQELNLDINQITDISPLAALTNLQTLSLGYTQVS-----DLTP 200
Query: 437 LKNLRSLTL---ESCKVTANDIKRLQS 460
L NL LT+ E+CKV+ DI L S
Sbjct: 201 LANLSKLTILNAENCKVS--DISPLAS 225
>gi|224089259|ref|XP_002308665.1| ein3-binding f-box protein 3 [Populus trichocarpa]
gi|222854641|gb|EEE92188.1| ein3-binding f-box protein 3 [Populus trichocarpa]
Length = 646
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 210/456 (46%), Gaps = 72/456 (15%)
Query: 17 SRCLTEVSLEAF-RDC-ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSG 73
S+ +T+V L A R C +L+ L L P V D+ + IA+ L +DLS +TD G
Sbjct: 176 SQGVTKVGLRAIARGCPSLKVLSLWNLPSVGDEGLSEIANGCHKLEKLDLSQCPAITDKG 235
Query: 74 LIHL-KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAG-- 129
L+ + K C NL L C I + GL+ + + +NL S+S + AI QG+ A
Sbjct: 236 LLAIAKSCPNLTDLVIESCTNIGNEGLQAVGQHCTNLKSISIKNCPAIGDQGIAALVSSA 295
Query: 130 --LINLVKLDLERCTRIHGGLV---------------------------NLKGLMKLESL 160
++ VKL T + +V N +GL KL+S+
Sbjct: 296 TNVLTKVKLQALNITDVSLAVVGHYGKAVTDLFLTSLSNVSERGFWVMGNGQGLQKLKSM 355
Query: 161 NIKWCNCITDSDMKPL-SGLTNLKSLQI-SCSKVTDSG-IAYLKGLQKLTLLNLEGCPVT 217
+ C +TD+ ++ + G NLK + CS ++D+G +++ K L L LE C
Sbjct: 356 TVASCVGLTDTGLEAVGKGCPNLKQFNLHKCSFLSDNGLVSFAKSAVSLESLLLEEC--- 412
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 277
++ G F+ +L C + + G +K L L E++ +
Sbjct: 413 ----HRITQFG--FFGSLLNCGANLKAASLVNCFG-IKDLKLDLPELSP--------CKS 457
Query: 278 LESLNLDSC-GIGDEGLVNLTGLC-NLKCLELSDTQVGSSGLRHLSGLTNLES--INLSF 333
L SL++ +C G GD L L LC L+ +ELS Q G + L L N E+ + ++
Sbjct: 458 LRSLSIRNCPGFGDGSLALLGKLCPQLQNVELSGLQ-GVTDAGFLPVLENCEAGLVKVNL 516
Query: 334 TGISDGSLRKLAGLS-----SLKSLNLDA-RQITDTGLAALT-SLTGLTHLDLFGARITD 386
+G + S + ++ ++ +L+ LNLD R+ITD L A+ + L+ LD+ TD
Sbjct: 517 SGCVNLSDKVVSVMTEQHGWTLEVLNLDGCRRITDASLVAIAENCFLLSDLDVSKCATTD 576
Query: 387 SG-AAYLR-NFKNLRSLEICGGGL-TDAGLTGLVSL 419
SG AA R N NL+ L + G + +D L L+ L
Sbjct: 577 SGIAAVARSNQLNLQVLSMSGCSMISDKSLLALIKL 612
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 158/348 (45%), Gaps = 43/348 (12%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRI--HGGLVNLKGLMKLES 159
RG +L LS ++ +G+ A G L KLDL +C I G L K L
Sbjct: 189 RGCPSLKVLSLWNLPSVGDEGLSEIANGCHKLEKLDLSQCPAITDKGLLAIAKSCPNLTD 248
Query: 160 LNIKWCNCITDSDMKPL-SGLTNLKSLQI-SCSKVTDSGIAYL--KGLQKLTLLNLEGCP 215
L I+ C I + ++ + TNLKS+ I +C + D GIA L LT + L+
Sbjct: 249 LVIESCTNIGNEGLQAVGQHCTNLKSISIKNCPAIGDQGIAALVSSATNVLTKVKLQALN 308
Query: 216 VTAACLDSLSALGS----LFYLNLNRCQLSDDGC------EKFSKIGSLKVLN-LGFNEI 264
+T L + G LF +L+ +S+ G + K+ S+ V + +G +
Sbjct: 309 ITDVSLAVVGHYGKAVTDLFLTSLS--NVSERGFWVMGNGQGLQKLKSMTVASCVGLTDT 366
Query: 265 TDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLT-GLCNLKCLELSD----TQVGSSGLR 318
E + KG NL+ NL C + D GLV+ +L+ L L + TQ G G
Sbjct: 367 GLEAVG--KGCPNLKQFNLHKCSFLSDNGLVSFAKSAVSLESLLLEECHRITQFGFFG-S 423
Query: 319 HLSGLTNLESINL-SFTGISDGSL--RKLAGLSSLKSLNL-DARQITDTGLAALTSL-TG 373
L+ NL++ +L + GI D L +L+ SL+SL++ + D LA L L
Sbjct: 424 LLNCGANLKAASLVNCFGIKDLKLDLPELSPCKSLRSLSIRNCPGFGDGSLALLGKLCPQ 483
Query: 374 LTHLDLFGAR-ITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLN 420
L +++L G + +TD+G L LE C GL L+G V+L+
Sbjct: 484 LQNVELSGLQGVTDAGF--------LPVLENCEAGLVKVNLSGCVNLS 523
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 116/276 (42%), Gaps = 49/276 (17%)
Query: 204 QKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNL-G 260
+K T + L V A S LG LF N Q ++ G ++ SLKVL+L
Sbjct: 145 KKATDIRLAAIAVGTA---SRGGLGKLFIRGSNSSQGVTKVGLRAIARGCPSLKVLSLWN 201
Query: 261 FNEITDECLVHLK-GLTNLESLNLDSC-GIGDEGLVNLTGLC-NLKCLEL-SDTQVGSSG 316
+ DE L + G LE L+L C I D+GL+ + C NL L + S T +G+ G
Sbjct: 202 LPSVGDEGLSEIANGCHKLEKLDLSQCPAITDKGLLAIAKSCPNLTDLVIESCTNIGNEG 261
Query: 317 LRHL-SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG-- 373
L+ + TNL+SI++ + I D G+AAL S
Sbjct: 262 LQAVGQHCTNLKSISIK-----------------------NCPAIGDQGIAALVSSATNV 298
Query: 374 LTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRH 433
LT + L ITD A + ++ G +TD LT L +++ + G
Sbjct: 299 LTKVKLQALNITDVSLAVVGHY---------GKAVTDLFLTSLSNVSERGFWVMGNG--- 346
Query: 434 LKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSF 469
+ L+ L+S+T+ SC + + PNL F
Sbjct: 347 -QGLQKLKSMTVASCVGLTDTGLEAVGKGCPNLKQF 381
>gi|146095030|ref|XP_001467457.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
gi|134071822|emb|CAM70515.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
Length = 811
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 9/167 (5%)
Query: 171 SDMKPLSGLTNLKSLQISCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
+D+ PL T +++L + S V GI L+ L++L ++ PV++ + SLSA S
Sbjct: 620 TDISPLLSCTKIQALILYRSSVRSLDGIGALRQLRRL---DIAETPVSS--IRSLSACQS 674
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L LNL+ + DDG + ++ SL+V+++ F IT L L ++LE L+ SC +
Sbjct: 675 LEILNLSNTAVDDDGFQGIGQVQSLRVVSMSFTAITQ--LGQLGQCSHLEELHAQSCPVT 732
Query: 290 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
EGLV L C L L LS T++ SG++ L+ L +N+ FT +
Sbjct: 733 SEGLVGLERACCLVKLNLSYTKL-QSGIQRLTNCRKLLKLNVKFTEV 778
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 184/437 (42%), Gaps = 72/437 (16%)
Query: 59 LLSVDLSGSDVTDSGLIHLKD-------------CSNLQSLDFN---FCIQISDG----- 97
L SV LSG +V D+ + HL +N+Q+L IQ+S+
Sbjct: 308 LRSVHLSGCNVKDADVPHLAQLPCVEELLLSRTRITNVQALAAGKGLRIIQLSNAQVDSD 367
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
G++ L+ L LT L ++ + +L+ L+L + G+ L L+ L
Sbjct: 368 GIDGLQTLPYLTRLDL---SSTLVSDVNFLGQSQSLIYLNLAKTHVTSEGIAGLSRLLTL 424
Query: 158 ESL-----NIKWCNCITDS-------------DMKPLSGLTNLKSLQ-ISCSKVTDSGIA 198
E L NI+ + + +S D L G L++LQ +S + + +
Sbjct: 425 EHLMLNNNNIRDVSFLAESHSLKTLSLQSTLVDSAGLEGFGRLQTLQDLSLAHTRVTSVT 484
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN 258
L+ L L+L+G V A + L L L L L++ ++ E K SL+ L
Sbjct: 485 ELQHCHNLWRLDLQGSFVDQAGIAGLERLPKLRILLLSKTDVA--SLELILKSESLEQLE 542
Query: 259 LGFNEITDE-CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC-NLKCLELSDTQVGSSG 316
+ F+ + ++ + + L + L C + D +N G+C L+ L + ++V S G
Sbjct: 543 VKFSHVNEKSAFFGVTKASALTDVTLTHCDVSD---INNLGMCKELRLLNVWSSKVTSEG 599
Query: 317 LRHLSGLTNLESINLSFTGISD-----------------GSLRKLAGLSSLKSL-NLDAR 358
+ L +L+ ++L+ T ++D S+R L G+ +L+ L LD
Sbjct: 600 IAGLCEARSLQEVDLAETAVTDISPLLSCTKIQALILYRSSVRSLDGIGALRQLRRLDIA 659
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG--- 415
+ + + +L++ L L+L + D G + ++LR + + +T G G
Sbjct: 660 ETPVSSIRSLSACQSLEILNLSNTAVDDDGFQGIGQVQSLRVVSMSFTAITQLGQLGQCS 719
Query: 416 -LVSLNVSNSRITSAGL 431
L L+ + +TS GL
Sbjct: 720 HLEELHAQSCPVTSEGL 736
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 158/356 (44%), Gaps = 45/356 (12%)
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMK---LESLNIKWCNCITDSDMKPLSGL---- 179
A L L +LD+ C G + G+ + L S+++ CN + D+D+ L+ L
Sbjct: 279 LASLQKLRRLDMTNCK----GDFDCAGIARCCFLRSVHLSGCN-VKDADVPHLAQLPCVE 333
Query: 180 ---------TNLKSL---------QISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 221
TN+++L Q+S ++V GI L+ L LT L+L V+ +
Sbjct: 334 ELLLSRTRITNVQALAAGKGLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSSTLVSD--V 391
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
+ L SL YLNL + ++ +G S++ +L+ L L N I D + L +L++L
Sbjct: 392 NFLGQSQSLIYLNLAKTHVTSEGIAGLSRLLTLEHLMLNNNNIRD--VSFLAESHSLKTL 449
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 341
+L S + GL L L+ L L+ T+V S + L NL ++L + +
Sbjct: 450 SLQSTLVDSAGLEGFGRLQTLQDLSLAHTRVTS--VTELQHCHNLWRLDLQGSFVDQAG- 506
Query: 342 RKLAGLSSLKSLNLDARQITDTG-LAALTSLTGLTHLDLFGARITDSGAAY-LRNFKNLR 399
+AGL L L + TD L + L L++ + + + A + + L
Sbjct: 507 --IAGLERLPKLRILLLSKTDVASLELILKSESLEQLEVKFSHVNEKSAFFGVTKASALT 564
Query: 400 SLEICGGGLTDAGLTGLVS----LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
+ + ++D G+ LNV +S++TS G+ L ++L+ + L VT
Sbjct: 565 DVTLTHCDVSDINNLGMCKELRLLNVWSSKVTSEGIAGLCEARSLQEVDLAETAVT 620
>gi|255571507|ref|XP_002526701.1| F-box protein, atfbl3, putative [Ricinus communis]
gi|223534001|gb|EEF35723.1| F-box protein, atfbl3, putative [Ricinus communis]
Length = 669
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 173/386 (44%), Gaps = 44/386 (11%)
Query: 69 VTDSGLIHLKD-CSNLQSLDFNFCIQISDGGLEHLRG-LSNLTSLSFRRNNAITAQGMKA 126
+ D L K C +L++LD + C IS GL L G L L+ + +T +
Sbjct: 244 IDDESLTAFKHGCKSLKTLDMSSCQNISHVGLSSLIGGAGGLEQLTLAYGSPVTLALANS 303
Query: 127 FAGLINLVKLDLERCTRIHGGLVNL-KGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKS 184
L L + L+ C GL L + L+ L++ C +TD + L + +L+
Sbjct: 304 LKQLSVLQSVKLDGCMITSAGLKALGNWCISLKELSLSKCVGVTDEGLSCLVTKHRDLRK 363
Query: 185 LQISC-SKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I+C K+TD I+++ LT L +E C + + F L RCQL
Sbjct: 364 LDITCCRKITDVSISHITSSCTNLTSLRMESCTLVSR---------EAFVLIGQRCQL-- 412
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLCN 301
L+ L+L NEI DE L + L SL L C I DEGL + C
Sbjct: 413 -----------LEELDLTDNEIDDEGLKSVSSCLKLASLKLGICLNISDEGLAYVGKHCT 461
Query: 302 -LKCLELSDTQ-VGSSGLRHL-SGLTNLESINLSFT-GISDGSLRKLAGLSSLKSLN-LD 356
L L+L + V +G+ + S +LE IN+S+ I+D SL LS K LN +
Sbjct: 462 RLTELDLYRSAGVTDTGILAIASSCLDLEMINMSYCRDITDSSL---ISLSKCKKLNTFE 518
Query: 357 ARQ---ITDTGLAAL-TSLTGLTHLDLFGAR-ITDSGAAYLRNF-KNLRSLEICGGGLTD 410
+R IT GLAA+ +T LD+ I D+G L F +NLR + + +TD
Sbjct: 519 SRGCPLITSLGLAAIAVGCKQITKLDIKKCHSIDDAGMLPLALFSQNLRQINLSYSSITD 578
Query: 411 AGLTGLVSLNVSNSRITSAGLRHLKP 436
GL L S++ + +T L+ L P
Sbjct: 579 VGLLSLASISCLQN-MTVLHLKGLTP 603
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 34/197 (17%)
Query: 51 VIASQGSSLLS-VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL-RGLSNL 108
V+ Q LL +DL+ +++ D GL + C L SL C+ ISD GL ++ + + L
Sbjct: 404 VLIGQRCQLLEELDLTDNEIDDEGLKSVSSCLKLASLKLGICLNISDEGLAYVGKHCTRL 463
Query: 109 TSLSFRRNNAITAQGMKAFAG------LINLVK---------LDLERCTRIHG------- 146
T L R+ +T G+ A A +IN+ + L +C +++
Sbjct: 464 TELDLYRSAGVTDTGILAIASSCLDLEMINMSYCRDITDSSLISLSKCKKLNTFESRGCP 523
Query: 147 -----GLVNLK-GLMKLESLNIKWCNCITDSDMKPLSGLT-NLKSLQISCSKVTDSG--- 196
GL + G ++ L+IK C+ I D+ M PL+ + NL+ + +S S +TD G
Sbjct: 524 LITSLGLAAIAVGCKQITKLDIKKCHSIDDAGMLPLALFSQNLRQINLSYSSITDVGLLS 583
Query: 197 IAYLKGLQKLTLLNLEG 213
+A + LQ +T+L+L+G
Sbjct: 584 LASISCLQNMTVLHLKG 600
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 169/391 (43%), Gaps = 85/391 (21%)
Query: 82 NLQSLDFNFCIQISDGGLEHLRG--LSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDL 138
++ LD + C +I+D L + ++L S+ R+ + G+ + A NLV +DL
Sbjct: 78 HVTHLDLSLCPRINDSSLTIISNSCKNSLKSIDLSRSRFFSYNGLTSLALNCKNLVNIDL 137
Query: 139 ERCTRIHGGLVNLKGLMK-LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGI 197
T + + K LE L + C ITD + + C V
Sbjct: 138 SNATELRDAAASAVAEAKNLERLWLGRCKLITD--------------IGVGCIAV----- 178
Query: 198 AYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS-KIGSLKV 256
G +KL L++L+ C LG ++D G + K ++
Sbjct: 179 ----GCKKLRLISLKWC------------LG-----------VTDLGVGLIAVKCKEIRS 211
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLC-NLKCLELSDTQ--- 311
L+L + IT++CL + L +LE L L+ C GI DE L C +LK L++S Q
Sbjct: 212 LDLSYLPITNKCLPSILKLKSLEDLVLEGCFGIDDESLTAFKHGCKSLKTLDMSSCQNIS 271
Query: 312 -VGSSGLRHLSGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL- 368
VG S L + G LE + L++ + ++ L LS L+S+ LD IT GL AL
Sbjct: 272 HVGLSSL--IGGAGGLEQLTLAYGSPVTLALANSLKQLSVLQSVKLDGCMITSAGLKALG 329
Query: 369 ---TSLTGLTHLDLFGARITDSG-AAYLRNFKNLRSLEI-CGGGLTDAGLTGLVSLNVSN 423
SL L+ G +TD G + + ++LR L+I C +TD VS
Sbjct: 330 NWCISLKELSLSKCVG--VTDEGLSCLVTKHRDLRKLDITCCRKITD----------VSI 377
Query: 424 SRITSAGLRHLKPLKNLRSLTLESCKVTAND 454
S ITS+ NL SL +ESC + + +
Sbjct: 378 SHITSS-------CTNLTSLRMESCTLVSRE 401
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 202/490 (41%), Gaps = 94/490 (19%)
Query: 42 PGVNDKWMDVIA-SQGSSLLSVDLSGSDV-TDSGLIHLK-DCSNLQSLDFNFCIQISDGG 98
P +ND + +I+ S +SL S+DLS S + +GL L +C NL ++D + ++ D
Sbjct: 88 PRINDSSLTIISNSCKNSLKSIDLSRSRFFSYNGLTSLALNCKNLVNIDLSNATELRDAA 147
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
+ NL L R IT G+ A G KL
Sbjct: 148 ASAVAEAKNLERLWLGRCKLITDIGVGCIA-----------------------VGCKKLR 184
Query: 159 SLNIKWCNCITDSDMKPLS-GLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
+++KWC +TD + ++ ++SL +S +T+ + + L+ L L LEGC
Sbjct: 185 LISLKWCLGVTDLGVGLIAVKCKEIRSLDLSYLPITNKCLPSILKLKSLEDLVLEGCFGI 244
Query: 218 AACLDSLSAL----GSLFYLNLNRCQ-LSDDGCEK-FSKIGSLKVLNLGFNEITDECLVH 271
+SL+A SL L+++ CQ +S G G L+ L L + L +
Sbjct: 245 DD--ESLTAFKHGCKSLKTLDMSSCQNISHVGLSSLIGGAGGLEQLTLAYGSPVTLALAN 302
Query: 272 -LKGLTNLESLNLDSCGIGDEGL-------VNLTGLCNLKCLELSDT------------- 310
LK L+ L+S+ LD C I GL ++L L KC+ ++D
Sbjct: 303 SLKQLSVLQSVKLDGCMITSAGLKALGNWCISLKELSLSKCVGVTDEGLSCLVTKHRDLR 362
Query: 311 --------QVGSSGLRHL-SGLTNLESINLSFTGISDGSLRKLAGLSS--LKSLNLDARQ 359
++ + H+ S TNL S+ + + L G L+ L+L +
Sbjct: 363 KLDITCCRKITDVSISHITSSCTNLTSLRMESCTLVSREAFVLIGQRCQLLEELDLTDNE 422
Query: 360 ITDTGLAALTSLTGLTHLDL-FGARITDSGAAYL-RNFKNLRSLEIC-GGGLTDAGLTGL 416
I D GL +++S L L L I+D G AY+ ++ L L++ G+TD G+ +
Sbjct: 423 IDDEGLKSVSSCLKLASLKLGICLNISDEGLAYVGKHCTRLTELDLYRSAGVTDTGILAI 482
Query: 417 VS-------LNVSNSR-ITSAGLRHLKPLKNLRSLTLESC----------------KVTA 452
S +N+S R IT + L L K L + C ++T
Sbjct: 483 ASSCLDLEMINMSYCRDITDSSLISLSKCKKLNTFESRGCPLITSLGLAAIAVGCKQITK 542
Query: 453 NDIKRLQSRD 462
DIK+ S D
Sbjct: 543 LDIKKCHSID 552
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 159/350 (45%), Gaps = 53/350 (15%)
Query: 55 QGSSLLSVDLSGSDVTDSGLIHLKD-CSNLQSLDFNFCIQISDGGLEHL----RGLSNLT 109
Q S L SV L G +T +GL L + C +L+ L + C+ ++D GL L R L L
Sbjct: 306 QLSVLQSVKLDGCMITSAGLKALGNWCISLKELSLSKCVGVTDEGLSCLVTKHRDLRKLD 365
Query: 110 SLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG--LMKLESLNIKWCNC 167
R+ ++ + + NL L +E CT + L G LE L++ N
Sbjct: 366 ITCCRKITDVSISHITS--SCTNLTSLRMESCTLVSREAFVLIGQRCQLLEELDLTD-NE 422
Query: 168 ITDSDMKPLSGLTNLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGCP---------V 216
I D +K +S L SL++ C ++D G+AY+ K +LT L+L +
Sbjct: 423 IDDEGLKSVSSCLKLASLKLGICLNISDEGLAYVGKHCTRLTELDLYRSAGVTDTGILAI 482
Query: 217 TAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
++CLD L +N++ C+ ++D SK L +G
Sbjct: 483 ASSCLD-------LEMINMSYCRDITDSSLISLSKCKKLNTF-------------ESRGC 522
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLT-NLESINLSFT 334
+ SL L + +G + +T L KC + D +G+ L+ + NL INLS++
Sbjct: 523 PLITSLGLAAIAVGCK---QITKLDIKKCHSIDD-----AGMLPLALFSQNLRQINLSYS 574
Query: 335 GISDGSLRKLAGLSSLKSLN-LDARQITDTGL-AALTSLTGLTHLDLFGA 382
I+D L LA +S L+++ L + +T +GL AAL + GLT + L +
Sbjct: 575 SITDVGLLSLASISCLQNMTVLHLKGLTPSGLAAALLACGGLTKVKLHAS 624
>gi|328704557|ref|XP_003242529.1| PREDICTED: leucine-rich repeat-containing protein 15-like
[Acyrthosiphon pisum]
Length = 427
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 166/403 (41%), Gaps = 36/403 (8%)
Query: 23 VSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSN 82
V+ E C D + Y V D+ D I +L DL +++ D + L +
Sbjct: 37 VTAECPEGCTCYDEVVECYEQVLDRIPDRIPQATKTL---DLCYNEIRDIESLAL--LTE 91
Query: 83 LQSLDFNFCIQISDGGLEHL------------------RGLSNLTSLS--FRRNNAITAQ 122
LQSLD +F + L HL R NL+ L F N I
Sbjct: 92 LQSLDLSFNEIMDIESLAHLTELKTLGLNNNNISEVKNRVFENLSQLQILFLHRNKIENI 151
Query: 123 GMKAFAGLINLVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
AF L +L +L+L+ IH L KGL KL+ L + N I + S L N
Sbjct: 152 ETGAFNNLTSLKELELD-YNNIHKLDLEMFKGLTKLDELGLS-NNNIKELKNGVFSNLRN 209
Query: 182 LKSLQISCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
L+ L + +K+ + +A+L L+ L L N + +LS L L L+ N+ +
Sbjct: 210 LQLLYLDNNKIMEIESLAHLTELKTLYLRNNYVSELKHGAFANLSQLQILL-LHTNKIEN 268
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC 300
+ G F+ + SLK L L +N I L KGLT L L L + I D L
Sbjct: 269 IETGA--FNNLTSLKELELDYNNIHKLDLEMFKGLTKLVKLGLSNNNISDVKNCVFENLS 326
Query: 301 NLKCLELSDTQVGSSGLRH--LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L+ L LS+ + S L+H + L+ L+ + L I + L+SLK L LD
Sbjct: 327 KLQILYLSNNNI--SELKHGAFANLSQLQILFLHRNKIENIENGAFNNLTSLKELELDYN 384
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
I L LT L L L I++ N +NL+ L
Sbjct: 385 NIHTLDLEMFKGLTKLDKLGLSNNNISEVKNGVFSNLRNLQLL 427
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 123/259 (47%), Gaps = 24/259 (9%)
Query: 172 DMKPLSGLTNLKSLQISCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
D++ L+ LT L+SL +S +++ D +A+L L+ L L N V ++LS L L
Sbjct: 82 DIESLALLTELQSLDLSFNEIMDIESLAHLTELKTLGLNNNNISEVKNRVFENLSQLQIL 141
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
F L+R ++ + F+ + SLK L L +N I L KGLT L+ L L + I +
Sbjct: 142 F---LHRNKIENIETGAFNNLTSLKELELDYNNIHKLDLEMFKGLTKLDELGLSNNNIKE 198
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
+ L NL+ L L + ++ + L+ LT L+++ L +S+ A LS L
Sbjct: 199 LKNGVFSNLRNLQLLYLDNNKIME--IESLAHLTELKTLYLRNNYVSELKHGAFANLSQL 256
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
+ L L +I + A +LT L L+L ++ N+ L++
Sbjct: 257 QILLLHTNKIENIETGAFNNLTSLKELEL--------------DYNNIHKLDLEMF---- 298
Query: 411 AGLTGLVSLNVSNSRITSA 429
GLT LV L +SN+ I+
Sbjct: 299 KGLTKLVKLGLSNNNISDV 317
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
L+ LT L+S++LSF I D + LA L+ LK+L L+ I++ +L+ L L L
Sbjct: 86 LALLTELQSLDLSFNEIMD--IESLAHLTELKTLGLNNNNISEVKNRVFENLSQLQILFL 143
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTD------AGLTGLVSLNVSNSRITSAGLRH 433
+I + N +L+ LE+ + GLT L L +SN+ I
Sbjct: 144 HRNKIENIETGAFNNLTSLKELELDYNNIHKLDLEMFKGLTKLDELGLSNNNIKELKNGV 203
Query: 434 LKPLKNLRSLTLESCKV 450
L+NL+ L L++ K+
Sbjct: 204 FSNLRNLQLLYLDNNKI 220
>gi|398020181|ref|XP_003863254.1| hypothetical protein, unknown function [Leishmania donovani]
gi|322501486|emb|CBZ36565.1| hypothetical protein, unknown function [Leishmania donovani]
Length = 811
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 9/167 (5%)
Query: 171 SDMKPLSGLTNLKSLQISCSKVTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
+D+ PL T +++L + S V GI L+ L++L ++ PV++ + SLSA S
Sbjct: 620 TDISPLLSCTKIQALILYRSSVRSLDGIGALRQLRRL---DIAETPVSS--IRSLSACQS 674
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L LNL+ + DDG + ++ SL+V+++ F IT L L ++LE L+ SC +
Sbjct: 675 LEILNLSNTAVDDDGFQGIGQVQSLRVVSMSFTAITQ--LGQLGQCSHLEELHAQSCPVT 732
Query: 290 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
EGLV L C L L LS T++ SG++ L+ L +N+ FT +
Sbjct: 733 SEGLVGLERACCLVKLNLSYTKL-QSGIQRLTNCRKLLKLNVKFTEV 778
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 184/437 (42%), Gaps = 72/437 (16%)
Query: 59 LLSVDLSGSDVTDSGLIHLKD-------------CSNLQSLDFN---FCIQISDG----- 97
L SV LSG +V D+ + HL +N+Q+L IQ+S+
Sbjct: 308 LRSVHLSGCNVKDADVPHLAQLPCVEELLLSRTRITNVQALAAGKGLRIIQLSNAQVDSD 367
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
G++ L+ L LT L ++ + +L+ L+L + G+ L L+ L
Sbjct: 368 GIDGLQTLPYLTRLDL---SSTLVSDVNFLGQSQSLIYLNLAKTHVTSEGIAGLSRLLTL 424
Query: 158 ESL-----NIKWCNCITDS-------------DMKPLSGLTNLKSLQ-ISCSKVTDSGIA 198
E L NI+ + + +S D L G L++LQ +S + + +
Sbjct: 425 EHLMLNNNNIRDVSFLAESHSLKTLSLQSTLVDSAGLEGFGRLQTLQDLSLAHTRVTSVT 484
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLN 258
L+ L L+L+G V A + L L L L L++ ++ E K SL+ L
Sbjct: 485 ELQHCHNLWRLDLQGSFVDQAGIAGLERLPKLRILLLSKTDVA--SLELILKSESLEQLE 542
Query: 259 LGFNEITDE-CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLC-NLKCLELSDTQVGSSG 316
+ F+ + ++ + + L + L C + D +N G+C L+ L + ++V S G
Sbjct: 543 VKFSHVNEKSAFFGVTKASALTDVTLTHCDVSD---INNLGMCKELRLLNVWSSKVTSEG 599
Query: 317 LRHLSGLTNLESINLSFTGISD-----------------GSLRKLAGLSSLKSL-NLDAR 358
+ L +L+ ++L+ T ++D S+R L G+ +L+ L LD
Sbjct: 600 IAGLCEARSLQEVDLAETAVTDISPLLSCTKIQALILYRSSVRSLDGIGALRQLRRLDIA 659
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTG--- 415
+ + + +L++ L L+L + D G + ++LR + + +T G G
Sbjct: 660 ETPVSSIRSLSACQSLEILNLSNTAVDDDGFQGIGQVQSLRVVSMSFTAITQLGQLGQCS 719
Query: 416 -LVSLNVSNSRITSAGL 431
L L+ + +TS GL
Sbjct: 720 HLEELHAQSCPVTSEGL 736
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 158/356 (44%), Gaps = 45/356 (12%)
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMK---LESLNIKWCNCITDSDMKPLSGL---- 179
A L L +LD+ C G + G+ + L S+++ CN + D+D+ L+ L
Sbjct: 279 LASLQKLRRLDMTNCK----GDFDCAGIARCCFLRSVHLSGCN-VKDADVPHLAQLPCVE 333
Query: 180 ---------TNLKSL---------QISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 221
TN+++L Q+S ++V GI L+ L LT L+L V+ +
Sbjct: 334 ELLLSRTRITNVQALAAGKGLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSSTLVSD--V 391
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
+ L SL YLNL + ++ +G S++ +L+ L L N I D + L +L++L
Sbjct: 392 NFLGQSQSLIYLNLAKTHVTSEGIAGLSRLLTLEHLMLNNNNIRD--VSFLAESHSLKTL 449
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 341
+L S + GL L L+ L L+ T+V S + L NL ++L + +
Sbjct: 450 SLQSTLVDSAGLEGFGRLQTLQDLSLAHTRVTS--VTELQHCHNLWRLDLQGSFVDQAG- 506
Query: 342 RKLAGLSSLKSLNLDARQITDTG-LAALTSLTGLTHLDLFGARITDSGAAY-LRNFKNLR 399
+AGL L L + TD L + L L++ + + + A + + L
Sbjct: 507 --IAGLERLPKLRILLLSKTDVASLELILKSESLEQLEVKFSHVNEKSAFFGVTKASALT 564
Query: 400 SLEICGGGLTDAGLTGLVS----LNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 451
+ + ++D G+ LNV +S++TS G+ L ++L+ + L VT
Sbjct: 565 DVTLTHCDVSDINNLGMCKELRLLNVWSSKVTSEGIAGLCEARSLQEVDLAETAVT 620
>gi|421888173|ref|ZP_16319281.1| leucine-rich-repeat type III effector protein (GALA4) [Ralstonia
solanacearum K60-1]
gi|378966462|emb|CCF96029.1| leucine-rich-repeat type III effector protein (GALA4) [Ralstonia
solanacearum K60-1]
Length = 466
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 145/340 (42%), Gaps = 54/340 (15%)
Query: 133 LVKLDLERCTRIHGGLVNLKGLMKL-----ESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L +LDL +CT G + G+ +L + L++ C DS + L+G L +L I
Sbjct: 150 LRELDLSQCT----GPITAAGIARLLALPLDRLDVGGCRLNADS-ARLLAGHPTLTALDI 204
Query: 188 SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEK 247
+ + D+G+A +KLT LN + A + +L+A ++ L+++ ++ D+G
Sbjct: 205 RRNAIGDAGVAAFARNKKLTALNASSNGIGPAGVRALAANTTIATLDISDNEIGDEGARA 264
Query: 248 F-------------SKIG-----------SLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
S IG +L L+L +NEI E L T L +L++
Sbjct: 265 LAGHTALTKLDASDSGIGPEGTRALATSMTLASLDLSYNEIGAEGAEALGENTTLTTLHV 324
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
+G L L L+LS +GS+G R T L +NLS GI +
Sbjct: 325 CGNALGHREAALLAASATLTTLDLSSNAIGSAGARAFGTNTTLTKLNLSNNGIE--RVSA 382
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
A S L L++ +I D L LT L+ RI D+GA+ L
Sbjct: 383 WANNSKLTKLDISNNRIGDAAAQVLADSRTLTTLNASSNRIGDAGASAL----------- 431
Query: 404 CGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSL 443
AG T L +LNVS +RI AGL L+ L+ L
Sbjct: 432 -------AGNTTLATLNVSFNRIGEAGLLALEANTTLKKL 464
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 119/282 (42%), Gaps = 23/282 (8%)
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
+ A + AG L LD+ R G+ KL +LN N I + ++ L+
Sbjct: 185 LNADSARLLAGHPTLTALDIRRNAIGDAGVAAFARNKKLTALNAS-SNGIGPAGVRALAA 243
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
T + +L IS +++ D G L G LT L+ + +L+ +L L+L+
Sbjct: 244 NTTIATLDISDNEIGDEGARALAGHTALTKLDASDSGIGPEGTRALATSMTLASLDLSYN 303
Query: 239 QLSDDGCEKFSKIGSLKVLN-----LGFNEITDECLVHLKGLTNLESLNLDSCG------ 287
++ +G E + +L L+ LG E +L S + S G
Sbjct: 304 EIGAEGAEALGENTTLTTLHVCGNALGHREAALLAASATLTTLDLSSNAIGSAGARAFGT 363
Query: 288 --------IGDEGLVNLTGLCN---LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
+ + G+ ++ N L L++S+ ++G + + L+ L ++N S I
Sbjct: 364 NTTLTKLNLSNNGIERVSAWANNSKLTKLDISNNRIGDAAAQVLADSRTLTTLNASSNRI 423
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 378
D LAG ++L +LN+ +I + GL AL + T L L+
Sbjct: 424 GDAGASALAGNTTLATLNVSFNRIGEAGLLALEANTTLKKLE 465
>gi|406939756|gb|EKD72712.1| hypothetical protein ACD_45C00605G0001 [uncultured bacterium]
Length = 541
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
LNL + G SK +L L+L N+I D T L L + + IG EG
Sbjct: 69 LNLEMNHIGPKGAALLSKNKTLSRLDLSNNQIGDAGASAFSKNTTLTELYIIANAIGPEG 128
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
L+ NL+ L + D +GSSG L+ + N++ I+L I D + + +SLKS
Sbjct: 129 AKGLSQNKNLRILLIGDNHIGSSGAISLANMRNIQRISLMNNDIDDDGIIPYSKNTSLKS 188
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
+ L+ ITD G LT+ L + L I D GA L K + SL+
Sbjct: 189 IALNKNHITDKGAKVLTNSISLKEIWLSSNEIGDEGAISLAYNKYITSLD---------- 238
Query: 413 LTGLVSLNVSNSRITSAGLRHLKPLKNLRSL 443
VSN+ I++ G++ L+ KN+ L
Sbjct: 239 --------VSNNHISTIGIKALQQNKNITEL 261
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 159/360 (44%), Gaps = 17/360 (4%)
Query: 54 SQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
S+ +SL S+ L+ + +TD G L + +L+ + + +I D G L +TSL
Sbjct: 181 SKNTSLKSIALNKNHITDKGAKVLTNSISLKEIWLS-SNEIGDEGAISLAYNKYITSLDV 239
Query: 114 RRNNAITAQGMKAFAGLINLVKLD----LERCTRIHGGLVNLKGLMKLESLNIKWCNCIT 169
NN I+ G+KA N+ +L+ L++ + ++ + + +E +I N +
Sbjct: 240 S-NNHISTIGIKALQQNKNITELETTGNLDKPPSLCFNDIDKRVNVSVEDPSIVRLNLYS 298
Query: 170 ----DSDMKPLSGLTNLKS----LQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 221
D+D+ ++ NL LQIS +K+ +G L + L LN+ + +
Sbjct: 299 CELRDADISFVTSYLNLHPYINFLQISNNKIGSNGAILLGQNKTLKTLNISNNLLDSRSA 358
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
++ S +L L+L L ++G + + L VLN+ N + D+ L + +L+ L
Sbjct: 359 EAFSKNTTLIRLDLEGNHLGENGAKILANNNVLDVLNISKNYVGDDGFAALTKMKSLKIL 418
Query: 282 NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSL 341
D I D G+ + L LS + S G +S +L + LS + D
Sbjct: 419 IADDNQISDLGV---SSPFLFHELYLSGNNISSIGADMISHNPSLTDLGLSDNYLGDDGA 475
Query: 342 RKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
LA S+ SLNL+ +I TG A+ L L++ I G A L N K L L
Sbjct: 476 TILARNKSIISLNLNYNEIGSTGAIAIAQNIILRDLNIAHNHICSIGLAALYNNKTLEKL 535
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 114/253 (45%), Gaps = 15/253 (5%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N I D+ S T L L I + + G L + L +L + + ++ SL+
Sbjct: 98 NQIGDAGASAFSKNTTLTELYIIANAIGPEGAKGLSQNKNLRILLIGDNHIGSSGAISLA 157
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
+ ++ ++L + DDG +SK SLK + L N ITD+ L +L+ + L S
Sbjct: 158 NMRNIQRISLMNNDIDDDGIIPYSKNTSLKSIALNKNHITDKGAKVLTNSISLKEIWLSS 217
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS---GLTNLESI-------NLSFTG 335
IGDEG ++L + L++S+ + + G++ L +T LE+ +L F
Sbjct: 218 NEIGDEGAISLAYNKYITSLDVSNNHISTIGIKALQQNKNITELETTGNLDKPPSLCFND 277
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL----THLDLFGARITDSGAAY 391
I D + S+ LNL + ++ D ++ +TS L L + +I +GA
Sbjct: 278 I-DKRVNVSVEDPSIVRLNLYSCELRDADISFVTSYLNLHPYINFLQISNNKIGSNGAIL 336
Query: 392 LRNFKNLRSLEIC 404
L K L++L I
Sbjct: 337 LGQNKTLKTLNIS 349
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 166/392 (42%), Gaps = 59/392 (15%)
Query: 38 LGQYPGVN--DKWMDVIASQGSSLLS-------VDLSGSDVTDSGLIHLKDCSNLQSLDF 88
L QYP V+ + M+ I +G++LLS +DLS + + D+G + L L
Sbjct: 60 LQQYPKVDTLNLEMNHIGPKGAALLSKNKTLSRLDLSNNQIGDAGASAFSKNTTLTEL-- 117
Query: 89 NFCIQISDGGLEHLRGLSNLTSLSFR--RNNAITAQGMKAFAGLINLVKLDLERCTRIHG 146
I + G E +GLS +L +N I + G + A + N+ ++ L
Sbjct: 118 --YIIANAIGPEGAKGLSQNKNLRILLIGDNHIGSSGAISLANMRNIQRISLMNNDIDDD 175
Query: 147 GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKL 206
G++ L+S+ + N ITD K L+ +LK + +S +++ D G L + +
Sbjct: 176 GIIPYSKNTSLKSIALNK-NHITDKGAKVLTNSISLKEIWLSSNEIGDEGAISLAYNKYI 234
Query: 207 TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
T L++ ++ + +L N N +L G K +L FN+I
Sbjct: 235 TSLDVSNNHISTIGIKALQQ-------NKNITELETTGNLD-------KPPSLCFNDIDK 280
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKC----LELSDTQVGSSGLRHLSG 322
V ++ + + LNL SC + D + +T NL L++S+ ++GS+G L
Sbjct: 281 RVNVSVEDPS-IVRLNLYSCELRDADISFVTSYLNLHPYINFLQISNNKIGSNGAILLGQ 339
Query: 323 LTNLESINLS-----------FTG-------------ISDGSLRKLAGLSSLKSLNLDAR 358
L+++N+S F+ + + + LA + L LN+
Sbjct: 340 NKTLKTLNISNNLLDSRSAEAFSKNTTLIRLDLEGNHLGENGAKILANNNVLDVLNISKN 399
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
+ D G AALT + L L +I+D G +
Sbjct: 400 YVGDDGFAALTKMKSLKILIADDNQISDLGVS 431
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 133/304 (43%), Gaps = 24/304 (7%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLN 210
L+ K+++LN++ N I LS L L +S +++ D+G + LT L
Sbjct: 60 LQQYPKVDTLNLEM-NHIGPKGAALLSKNKTLSRLDLSNNQIGDAGASAFSKNTTLTELY 118
Query: 211 LEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLV 270
+ + LS +L L + + G + + +++ ++L N+I D+ ++
Sbjct: 119 IIANAIGPEGAKGLSQNKNLRILLIGDNHIGSSGAISLANMRNIQRISLMNNDIDDDGII 178
Query: 271 HLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG---LRHLSGLTNLE 327
T+L+S+ L+ I D+G LT +LK + LS ++G G L + +T+L+
Sbjct: 179 PYSKNTSLKSIALNKNHITDKGAKVLTNSISLKEIWLSSNEIGDEGAISLAYNKYITSLD 238
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSL-NLDARQI-----TDTGLAALTSLTGLTHLDLFG 381
N + I +L++ ++ L++ NLD D + + L+L+
Sbjct: 239 VSNNHISTIGIKALQQNKNITELETTGNLDKPPSLCFNDIDKRVNVSVEDPSIVRLNLYS 298
Query: 382 ARITDSGAAYLRNFKNLRSLEICGGGLTDAGLTGLVSLNVSNSRITSAGLRHLKPLKNLR 441
+ D+ +++ ++ NL + L +SN++I S G L K L+
Sbjct: 299 CELRDADISFVTSYLNLHPY--------------INFLQISNNKIGSNGAILLGQNKTLK 344
Query: 442 SLTL 445
+L +
Sbjct: 345 TLNI 348
>gi|397630643|gb|EJK69852.1| hypothetical protein THAOC_08850 [Thalassiosira oceanica]
Length = 859
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 139/327 (42%), Gaps = 65/327 (19%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKP----LSGLTNLKSLQISCSKVTDSG---IAYLKGL 203
L+ + L S+ + N ITDS+M+ L +T L + CS +TD G I L+ L
Sbjct: 158 LEDIADLHSIEVSLPNSITDSEMEHAILYLQLVTRLNC--VGCSYLTDKGFKLIGRLREL 215
Query: 204 QKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNE 263
Q+L L+ L SL+ LG+L D +K S G L +
Sbjct: 216 QELYFLH-------NKQLTSLTFLGNL------------DRLKKLSVDGMLNSRGKSTPQ 256
Query: 264 ITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL 323
+TDE L G+ E +L IG D +V GL HL+ +
Sbjct: 257 VTDETL----GIIAGEMHSLRELIIG------------------VDMEVSGIGLVHLAEM 294
Query: 324 TNLESINLSF---TGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLTGLTHLDL 379
LES++L GI+D L+ L L L+SL + ++D L L L + L+L
Sbjct: 295 GRLESLSLERGAGEGITDNGLKVLCSLGRLRSLRITHCAYLSDRSLNYLQHLHRIEKLEL 354
Query: 380 F---GARITDSGAAYLRNFKNLRSLEICGGG-LTDAG---LTGLVSLNVSNSR----ITS 428
+ TD GA L KNL+ L + G LTD G L+ + +L N R IT
Sbjct: 355 SCVDDSSFTDEGARQLSKLKNLKELSLVGWERLTDRGVYYLSKISTLECLNLRYCPSITD 414
Query: 429 AGLRHLKPLKNLRSLTLESCKVTANDI 455
L HL+ LK LR L L C D+
Sbjct: 415 ESLEHLRYLKGLRKLELSDCDARPADV 441
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 121/240 (50%), Gaps = 24/240 (10%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISD----GGLEHLRGLSNLTSLSFRRNNA--IT 120
S +TD G + LQ L F Q++ G L+ L+ LS L+ R + +T
Sbjct: 199 SYLTDKGFKLIGRLRELQELYFLHNKQLTSLTFLGNLDRLKKLSVDGMLNSRGKSTPQVT 258
Query: 121 AQGMKAFAGLIN-----LVKLDLERCTRIHG-GLVNLKGLMKLESLNIKWC--NCITDSD 172
+ + AG ++ ++ +D+E + G GLV+L + +LESL+++ ITD+
Sbjct: 259 DETLGIIAGEMHSLRELIIGVDME----VSGIGLVHLAEMGRLESLSLERGAGEGITDNG 314
Query: 173 MKPLSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNL---EGCPVTAACLDSLSALG 228
+K L L L+SL+I+ C+ ++D + YL+ L ++ L L + T LS L
Sbjct: 315 LKVLCSLGRLRSLRITHCAYLSDRSLNYLQHLHRIEKLELSCVDDSSFTDEGARQLSKLK 374
Query: 229 SLFYLNL-NRCQLSDDGCEKFSKIGSLKVLNLGF-NEITDECLVHLKGLTNLESLNLDSC 286
+L L+L +L+D G SKI +L+ LNL + ITDE L HL+ L L L L C
Sbjct: 375 NLKELSLVGWERLTDRGVYYLSKISTLECLNLRYCPSITDESLEHLRYLKGLRKLELSDC 434
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 84/182 (46%), Gaps = 8/182 (4%)
Query: 65 SGSDVTDSGL-IHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN--NAITA 121
S VTD L I + +L+ L +++S GL HL + L SLS R IT
Sbjct: 253 STPQVTDETLGIIAGEMHSLRELIIGVDMEVSGIGLVHLAEMGRLESLSLERGAGEGITD 312
Query: 122 QGMKAFAGLINLVKLDLERCTRIHGGLVN-LKGLMKLESLNIKWCN--CITDSDMKPLSG 178
G+K L L L + C + +N L+ L ++E L + + TD + LS
Sbjct: 313 NGLKVLCSLGRLRSLRITHCAYLSDRSLNYLQHLHRIEKLELSCVDDSSFTDEGARQLSK 372
Query: 179 LTNLKSLQ-ISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSALGSLFYLNLN 236
L NLK L + ++TD G+ YL + L LNL CP +T L+ L L L L L+
Sbjct: 373 LKNLKELSLVGWERLTDRGVYYLSKISTLECLNLRYCPSITDESLEHLRYLKGLRKLELS 432
Query: 237 RC 238
C
Sbjct: 433 DC 434
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 151/336 (44%), Gaps = 48/336 (14%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSD--VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEH 101
+ D +D+ S+G LS SD +T S L L+D ++L S++ + I+D +EH
Sbjct: 129 MTDNELDIFISKGY------LSRSDKKLTVSYLELLEDIADLHSIEVSLPNSITDSEMEH 182
Query: 102 -LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL 160
+ L +T L+ + +T +G K L L +L ++ L L L +L+ L
Sbjct: 183 AILYLQLVTRLNCVGCSYLTDKGFKLIGRLRELQELYFLHNKQL-TSLTFLGNLDRLKKL 241
Query: 161 NI--------KWCNCITDSDMKPLSG-LTNLKSLQISCS-KVTDSGIAYLKGLQKLTLLN 210
++ K +TD + ++G + +L+ L I +V+ G+ +L + +L L+
Sbjct: 242 SVDGMLNSRGKSTPQVTDETLGIIAGEMHSLRELIIGVDMEVSGIGLVHLAEMGRLESLS 301
Query: 211 LE---GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
LE G +T L L +LG L L + C D + LN
Sbjct: 302 LERGAGEGITDNGLKVLCSLGRLRSLRITHCAYLSD-----------RSLNY-------- 342
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHLSGLTNL 326
L HL + LE +D DEG L+ L NLK L L ++ G+ +LS ++ L
Sbjct: 343 -LQHLHRIEKLELSCVDDSSFTDEGARQLSKLKNLKELSLVGWERLTDRGVYYLSKISTL 401
Query: 327 ESINLSF-TGISDGSLRKLAGLSSLKSLNL---DAR 358
E +NL + I+D SL L L L+ L L DAR
Sbjct: 402 ECLNLRYCPSITDESLEHLRYLKGLRKLELSDCDAR 437
>gi|302836756|ref|XP_002949938.1| hypothetical protein VOLCADRAFT_90266 [Volvox carteri f.
nagariensis]
gi|300264847|gb|EFJ49041.1| hypothetical protein VOLCADRAFT_90266 [Volvox carteri f.
nagariensis]
Length = 685
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 138/314 (43%), Gaps = 56/314 (17%)
Query: 63 DLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQ 122
D + V++ GL + ++L L C+ +++ GL L L+ LT LS R +T Q
Sbjct: 302 DRARPWVSNRGLASVCRITSLTRLILRDCLSLTNRGLAPLSSLTGLTCLSLRGCRKLTNQ 361
Query: 123 GMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNL 182
G++A GL +L L +L G+++L +D + PL+ L L
Sbjct: 362 GIEALRGLQHLQHL-------------SLYGVVRL-----------SDKGLVPLAALPAL 397
Query: 183 KSLQISCSKVTDSGIAY----LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
++L++ ++V D G+ + L GL+ L L+ E VT A + LS+L L L L
Sbjct: 398 RTLELGYTRVRDEGLGHVAVRLGGLRALVLVREE---VTDAGVRQLSSLSGLTRLVLR-- 452
Query: 239 QLSDDGCEK--------FSKIGSLKVL----NLGFNEIT-DECLVHLKGLTNLESLNLDS 285
D E + L+VL N FN + CL L L SL+L +
Sbjct: 453 ----DTVEATGETLAVLLPALKELQVLDLQRNWSFNNMQLARCLPQLVSAPALASLDLRA 508
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSG----LRHLSGLTNLESINLSFTGISDGSL 341
+G+EG+ L + +L+ L LS S L L LT L NL + +
Sbjct: 509 TWVGEEGIAALARIPSLRRLALSPQHEHWSKYLNLLPQLHQLTALVLRNLP--SLPYQLV 566
Query: 342 RKLAGLSSLKSLNL 355
LAGL L+ L++
Sbjct: 567 EALAGLPGLRELDV 580
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 26/162 (16%)
Query: 221 LDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNL 278
L S+ + SL L L C L++ G S + L L+L G ++T++ + L+GL +L
Sbjct: 313 LASVCRITSLTRLILRDCLSLTNRGLAPLSSLTGLTCLSLRGCRKLTNQGIEALRGLQHL 372
Query: 279 ESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
+ L+L + D+GLV L L L+ LEL T+V GL H++
Sbjct: 373 QHLSLYGVVRLSDKGLVPLAALPALRTLELGYTRVRDEGLGHVA---------------- 416
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
L L++L L ++TD G+ L+SL+GLT L L
Sbjct: 417 -------VRLGGLRALVLVREEVTDAGVRQLSSLSGLTRLVL 451
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 10/135 (7%)
Query: 336 ISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGAR-ITDSGAAYLR 393
+S+ L + ++SL L L D +T+ GLA L+SLTGLT L L G R +T+ G LR
Sbjct: 308 VSNRGLASVCRITSLTRLILRDCLSLTNRGLAPLSSLTGLTCLSLRGCRKLTNQGIEALR 367
Query: 394 NFKNLRSLEICG-------GGLTDAGLTGLVSLNVSNSRITSAGLRHLK-PLKNLRSLTL 445
++L+ L + G G + A L L +L + +R+ GL H+ L LR+L L
Sbjct: 368 GLQHLQHLSLYGVVRLSDKGLVPLAALPALRTLELGYTRVRDEGLGHVAVRLGGLRALVL 427
Query: 446 ESCKVTANDIKRLQS 460
+VT +++L S
Sbjct: 428 VREEVTDAGVRQLSS 442
>gi|83629901|gb|ABC26612.1| internalin E [Listeria monocytogenes]
gi|83629911|gb|ABC26617.1| internalin E [Listeria monocytogenes]
gi|83629913|gb|ABC26618.1| internalin E [Listeria monocytogenes]
gi|83629921|gb|ABC26622.1| internalin E [Listeria monocytogenes]
gi|83629929|gb|ABC26626.1| internalin E [Listeria monocytogenes]
gi|83629939|gb|ABC26631.1| internalin E [Listeria monocytogenes]
gi|83629961|gb|ABC26642.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 107/216 (49%), Gaps = 38/216 (17%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
+ LTNL L+++ +++TD ++ L L K+T L L G P L +SAL L
Sbjct: 91 MQYLTNLSELELTDNQITD--VSPLANLTKITELGLSGNP-----LKDVSALAGL----- 138
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
SLK+L+L + +ITD + L GLTNL+ LNLD I D +
Sbjct: 139 ----------------KSLKMLHLIYTDITD--VTSLAGLTNLQELNLDINQITD--ISP 178
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L L NL+ L L TQV S L ++ L+ L +N +SD + LA LSSL + L
Sbjct: 179 LAALSNLQTLSLGYTQV--SDLTPIANLSKLTILNAENCKVSD--ISPLASLSSLTEVYL 234
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
QI+D ++ L ++ L+ ++L IT+ Y
Sbjct: 235 RENQISD--VSPLANIPNLSIIELTDQIITNQPVYY 268
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 36/189 (19%)
Query: 274 GLTNLESL----NLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG-----LRHLSGLT 324
G+T +E + NL + D + +++ L NL + T++G SG + L+GL
Sbjct: 84 GITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI----TELGLSGNPLKDVSALAGLK 139
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI 384
+L+ ++L +T I+D + LAGL++L+ LNLD QITD ++ L +L+ L L L ++
Sbjct: 140 SLKMLHLIYTDITD--VTSLAGLTNLQELNLDINQITD--ISPLAALSNLQTLSLGYTQV 195
Query: 385 TDSGAAYLRNFKNLRSLEICGG---GLTDAGLTGLVSLNVSNSRITSAGLRH-----LKP 436
+D L NL L I ++D ++ L SL S +T LR + P
Sbjct: 196 SD-----LTPIANLSKLTILNAENCKVSD--ISPLASL----SSLTEVYLRENQISDVSP 244
Query: 437 LKNLRSLTL 445
L N+ +L++
Sbjct: 245 LANIPNLSI 253
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 46/262 (17%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCI 92
+Q + Q +N+ + D + + L L +DVTD + D +
Sbjct: 30 VQAAVIEQPTPINEIFTDPVVADNVKTL---LEKADVTDE----------VTQTDLDSIT 76
Query: 93 QIS--DGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL-DLERCTRIHGGLV 149
Q+S G+ + G+ LT+LS +T + + L NL K+ +L +
Sbjct: 77 QLSAKSAGITTIEGMQYLTNLSELE---LTDNQITDVSPLANLTKITELGLSGNPLKDVS 133
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD-SGIAYLKGLQ---- 204
L GL L+ L++ + + +D+ L+GLTNL+ L + +++TD S +A L LQ
Sbjct: 134 ALAGLKSLKMLHLIYTDI---TDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSL 190
Query: 205 ---------------KLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFS 249
KLT+LN E C V + + L++L SL + L Q+SD +
Sbjct: 191 GYTQVSDLTPIANLSKLTILNAENCKV--SDISPLASLSSLTEVYLRENQISD--VSPLA 246
Query: 250 KIGSLKVLNLGFNEITDECLVH 271
I +L ++ L IT++ + +
Sbjct: 247 NIPNLSIIELTDQIITNQPVYY 268
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 261 FNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
NEI + +V N+++L L+ + DE V T L ++ +LS G + + +
Sbjct: 41 INEIFTDPVVA----DNVKTL-LEKADVTDE--VTQTDLDSIT--QLSAKSAGITTIEGM 91
Query: 321 SGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 380
LTNL + L+ I+D S LA L+ + L L + D ++AL L L L L
Sbjct: 92 QYLTNLSELELTDNQITDVS--PLANLTKITELGLSGNPLKD--VSALAGLKSLKMLHLI 147
Query: 381 GARITDSGAAYLRNFKNLRSLEICGGGLTD----AGLTGLVSLNVSNSRITSAGLRHLKP 436
ITD + L NL+ L + +TD A L+ L +L++ ++++ L P
Sbjct: 148 YTDITDVTS--LAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVS-----DLTP 200
Query: 437 LKNLRSLTL---ESCKVTANDIKRLQS 460
+ NL LT+ E+CKV+ DI L S
Sbjct: 201 IANLSKLTILNAENCKVS--DISPLAS 225
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,647,416,663
Number of Sequences: 23463169
Number of extensions: 262965765
Number of successful extensions: 840238
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4934
Number of HSP's successfully gapped in prelim test: 17423
Number of HSP's that attempted gapping in prelim test: 678572
Number of HSP's gapped (non-prelim): 90647
length of query: 472
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 326
effective length of database: 8,933,572,693
effective search space: 2912344697918
effective search space used: 2912344697918
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)