Query 012051
Match_columns 472
No_of_seqs 141 out of 1212
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 20:39:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012051.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012051hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 3.2E-83 1.1E-87 661.2 44.6 426 7-469 4-438 (439)
2 2xr7_A Malonyltransferase; xen 100.0 1.7E-74 5.9E-79 598.9 35.7 423 11-472 2-451 (453)
3 2e1v_A Acyl transferase; BAHD 100.0 7.9E-74 2.7E-78 593.9 33.7 424 9-472 5-451 (454)
4 2bgh_A Vinorine synthase; VS, 100.0 4.5E-73 1.5E-77 582.4 32.7 402 9-470 3-414 (421)
5 2rkv_A Trichothecene 3-O-acety 100.0 2.5E-64 8.4E-69 522.6 34.8 399 29-465 4-439 (451)
6 1q9j_A PAPA5, polyketide synth 98.9 3.1E-07 1.1E-11 92.8 23.4 296 27-376 5-313 (422)
7 1l5a_A Amide synthase, VIBH; n 98.6 2.7E-05 9.2E-10 78.9 27.1 356 63-471 34-401 (436)
8 4hvm_A Tlmii; PSI-biology, mid 98.4 1.9E-05 6.6E-10 81.5 20.1 297 27-376 11-327 (493)
9 2xhg_A Tyrocidine synthetase A 98.3 0.00011 3.9E-09 74.9 24.2 308 27-378 15-337 (466)
10 2jgp_A Tyrocidine synthetase 3 98.3 8.6E-05 2.9E-09 77.2 23.5 294 27-376 94-400 (520)
11 2vsq_A Surfactin synthetase su 98.1 7.4E-05 2.5E-09 86.5 18.8 272 63-376 48-327 (1304)
12 3fot_A 15-O-acetyltransferase; 97.7 0.0049 1.7E-07 63.8 22.1 109 266-376 277-399 (519)
13 3cla_A Type III chloramphenico 68.4 3.2 0.00011 37.2 3.2 44 144-190 164-209 (213)
14 2i9d_A Chloramphenicol acetylt 66.9 3.6 0.00012 37.0 3.2 41 143-183 171-213 (217)
15 1dpb_A Dihydrolipoyl-transacet 66.7 4.5 0.00015 37.0 4.0 29 159-190 208-236 (243)
16 1q23_A Chloramphenicol acetylt 66.3 3.7 0.00013 37.0 3.2 44 144-190 168-213 (219)
17 3b8k_A PDCE2;, dihydrolipoylly 65.4 4.6 0.00016 36.9 3.7 29 159-190 204-232 (239)
18 3rqc_A Probable lipoamide acyl 62.7 4 0.00014 36.9 2.8 29 159-190 187-215 (224)
19 1scz_A E2, dihydrolipoamide su 61.7 5 0.00017 36.4 3.2 29 159-190 196-224 (233)
20 2ii3_A Lipoamide acyltransfera 59.8 5.6 0.00019 36.8 3.2 29 159-190 224-252 (262)
21 3mae_A 2-oxoisovalerate dehydr 54.1 8 0.00027 35.7 3.2 29 159-190 210-238 (256)
22 3l60_A Branched-chain alpha-ke 52.6 8.8 0.0003 35.2 3.2 29 159-190 205-233 (250)
23 2xl1_A Arginine attenuator pep 50.3 11 0.00038 20.4 2.0 19 293-311 6-24 (26)
24 4hhu_A OR280; engineered prote 39.9 39 0.0013 26.6 4.6 37 63-100 93-129 (170)
25 4hhu_A OR280; engineered prote 36.7 39 0.0013 26.6 4.2 37 63-100 12-48 (170)
26 3dva_I Dihydrolipoyllysine-res 34.8 8.2 0.00028 38.5 0.0 29 159-190 391-419 (428)
27 2kl8_A OR15; structural genomi 32.7 45 0.0015 23.2 3.4 37 63-100 11-47 (85)
28 1x93_A Hypothetical protein HP 28.3 1.1E+02 0.0037 20.0 4.5 23 267-289 2-24 (55)
29 2k1o_A Putative; repressor, tr 27.9 1.2E+02 0.0042 20.5 4.8 42 264-314 13-54 (66)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=3.2e-83 Score=661.20 Aligned_cols=426 Identities=26% Similarity=0.433 Sum_probs=359.0
Q ss_pred CCceEEEeeeEEEeCCCCCCCcceeCCcccCCCC-ccceEEEEecCCCCCCCCchhhHHHHHHHHHHHhhhhccccCcee
Q 012051 7 NCPAVCVTKSISVYPKSLSPQKILNLSNLDRQCP-LLMYLVFFYKPTFDCQNLSLDYVFSSLKSGLEETLSIWYPAAGRL 85 (472)
Q Consensus 7 ~~~~v~v~~~~~V~P~~~~p~~~~~LS~lD~~~~-~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl 85 (472)
..|+|++.++++|+|+.++|.+.++||.||+.++ .|++.+|||+.++.. ....+++||+||+++|++||||||||
T Consensus 4 ~~~~V~i~~~~~V~P~~~tp~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~----~~~~~~~Lk~sLs~~L~~f~plAGRl 79 (439)
T 4g22_A 4 GSMKIEVKESTMVRPAQETPGRNLWNSNVDLVVPNFHTPSVYFYRPTGSS----NFFDAKVLKDALSRALVPFYPMAGRL 79 (439)
T ss_dssp --CCEEEEEEEEECCSSCCCCCEECCCHHHHSCCTTCCCEEEEECCCSCT----TTTCHHHHHHHHHHHTTTTGGGGCEE
T ss_pred CceEEEEeeeEEEeCCCCCCCCeecCChhHhCccccceeeEEEEcCCCCc----cccHHHHHHHHHHHHHhhccccceee
Confidence 3488999999999999999989999999999988 999999999975432 12468999999999999999999999
Q ss_pred eeecCCCCeEEEEEcCCCeEEEEEeecccccccCCCCCChhHHhccccccccCCCCCCCCeEEEEEEEEccCeEEEEecc
Q 012051 86 MSLNPSDRKLNIWCNNKGAILVEALTRVKLSELGDLSQYNEFFENLVYKPVFNGNFSEMPLVVAQVTRFACGGYSIGIGT 165 (472)
Q Consensus 86 ~~~~~~~g~~~i~~~~~gv~f~~a~~~~~~~~l~~~~~~~~~~~~l~p~~~~~~~~~~~P~l~vQvt~f~~GG~iL~~~~ 165 (472)
+.++ +|+++|+|+++||.|++|+++++++|+.+.. |...+++|+|..+...+..+.|++.||||+|.|||++||+++
T Consensus 80 -~~~~-~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~-p~~~~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~ 156 (439)
T 4g22_A 80 -KRDE-DGRIEIECNGEGVLFVEAESDGVVDDFGDFA-PTLELRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGM 156 (439)
T ss_dssp -EECT-TSCEEEECCCCCEEEEEEEESSCGGGGTTCC-CCGGGGGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEEEEE
T ss_pred -eeCC-CCCEEEEECCCCCEEEEEEcCCcHHHhcCCC-CCHHHHhcCCCCCcccccccCceeEEEEEEecCCCEEEEEEe
Confidence 7877 6999999999999999999999999997654 555678898876654445678999999999999999999999
Q ss_pred cccccchhhHHHHHHHHhhhhhhhhcCCCCCCCCCCCCCCCCccccccccccCCCccCCcHHhhhhccCCcc-ccccccc
Q 012051 166 SHSLFDGPATYDFLSAWACNSAIKKRKGVTVSDHQPVHERGLMVLDNISHVHNAGTVKSPVAAARAAAIDHL-YQLIKNT 244 (472)
Q Consensus 166 ~H~v~Dg~g~~~fl~~wa~~~~~~r~G~~~~~~~~P~~dr~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~ 244 (472)
||.++||.|+.+|+++|| ++|| |. +.+. +|++||+.+.+++ || ...++|. |.+.+.
T Consensus 157 ~H~v~Dg~~~~~Fl~~wa---~~~r-g~-~~~~-~P~~dr~~l~~~~-----------pp-----~~~~~~~~~~~~~~- 213 (439)
T 4g22_A 157 RHHAADGFSGLHFINSWS---DMAR-GL-DVTL-PPFIDRTLLRARD-----------PP-----QPQFQHIEYQPPPA- 213 (439)
T ss_dssp CTTTCCHHHHHHHHHHHH---HHHT-TC-CCSS-CCBCCGGGGCCCS-----------SC-----CCSSCCGGGSCCC--
T ss_pred eeccCcHHHHHHHHHHHH---HHhC-CC-CCCC-CCccccccccCCC-----------CC-----CCCcCcccccCCCC-
Confidence 999999999999999999 9999 84 5566 7999999887655 55 4334444 433221
Q ss_pred ccCCCCCCcCCCCcccCCCCCeEEEEEEeCHHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHHHHHHhCCCccceEEEE
Q 012051 245 MINSQNSEVGGLNFSEMGSSNYVLKTFHLSGAIVESLKRKVLGERRGNFSCSSFELVAAHLWKARTKAFALKKETMVCLQ 324 (472)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~St~d~l~A~iW~~~~rAr~~~~~~~~~l~ 324 (472)
........ |. ....+++.++|+|++++|++||+.+.++.. ..++|++|+|+||+|+|++|||++++++.+.+.
T Consensus 214 ----~~~~~~~~-~~-~~~~~~~~~~f~fs~~~i~~LK~~a~~~~~-~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~ 286 (439)
T 4g22_A 214 ----LAVSPQTA-AS-DSVPETAVSIFKLTREQISALKAKSKEDGN-TISYSSYEMLAGHVWRCACKARGLEVDQGTKLY 286 (439)
T ss_dssp --------------------CEEEEEEEECHHHHHHHHHGGGGGGC-CCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred ----Cccccccc-cc-CCcccceEEEEEECHHHHHHHHHHhhccCC-CCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEE
Confidence 11110000 00 011468999999999999999999986542 357999999999999999999998888999999
Q ss_pred EeecCCCccCCCCCCCccccceeccccccchhhhhhccHHHHHHHHHHHHHhCChhHHHHHHHhhhcCC------CCCCC
Q 012051 325 FAVDTRNKMVPPLPKGFSGNAYVLASVALTAGELEELSHEAIVEKIKEAKNSINNEYVNGYIEALDAPQ------GSLPP 398 (472)
Q Consensus 325 ~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~~~~~~v~~~~~~~~~~~------~~~~~ 398 (472)
++||+|+|++||+|++||||++.++.+.++++||.+++|+++|..||+++++++++|+++.++|++... +..+.
T Consensus 287 ~~vd~R~rl~Pplp~~Y~GN~v~~~~~~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 366 (439)
T 4g22_A 287 IATDGRARLRPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHT 366 (439)
T ss_dssp EEEECTTTSSSCCCTTBCSCCEEEECCEEEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHH
T ss_pred EEEcccCCCCCCCCCCcccceeehhhcceEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999987421 11111
Q ss_pred C-CCcEEEecCCCCCCccccCCCCccccccccccCCCcEEEEeeCCCCCCcEEEEEecCHHHHHHHHHHHHh
Q 012051 399 L-KELTILSDWTRMPFHKIDFLNGEAAYASPLASPIPQVAYFMQNPSDLRGIDVRIGLFPQTLDAFSHYFLR 469 (472)
Q Consensus 399 ~-~~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~~~~~g~~~ilp~~~~~g~~ev~v~L~~~~m~~l~~~~~~ 469 (472)
+ ..++.+|||++|++|++|||||||+++++...+.+|.++++|+++++||++|.|+|++++|++|++++++
T Consensus 367 ~~~~~~~vssw~r~~~y~~DFGwGkP~~~~~~~~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~~~~~ 438 (439)
T 4g22_A 367 FKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQSFLYD 438 (439)
T ss_dssp HCTTCEEEEECTTSCTTCCCCSSCCCSEEEESSCCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHHHHTC
T ss_pred CcCCcEEEeecCcCCccccccCCCCcceeeccccCCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHHHhcc
Confidence 2 3579999999999999999999999999876667899999999878899999999999999999999975
No 2
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=1.7e-74 Score=598.85 Aligned_cols=423 Identities=20% Similarity=0.245 Sum_probs=340.4
Q ss_pred EEEeeeEEEeCCCC-CCCcceeCCcccCCC-C-ccceEEEEecCCCCCCCCc--hhhHHHHHHHHHHHhhhhccccCcee
Q 012051 11 VCVTKSISVYPKSL-SPQKILNLSNLDRQC-P-LLMYLVFFYKPTFDCQNLS--LDYVFSSLKSGLEETLSIWYPAAGRL 85 (472)
Q Consensus 11 v~v~~~~~V~P~~~-~p~~~~~LS~lD~~~-~-~~~~~~~~f~~~~~~~~~~--~~~~~~~L~~sL~~~L~~~p~laGrl 85 (472)
|+|.++++|+|+.+ ++.+.++||.||+.+ . .|++.+|||+.+... + .++++++||+||+++|++||||||||
T Consensus 2 v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~---~~~~~~~~~~Lk~sLs~~L~~~~plAGRl 78 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSATELTLPLTYFDHVWLAFHRMRRILFYKLPISR---PDFVQTIIPTLKDSLSLTLKYYLPLAGNV 78 (453)
T ss_dssp CEEEEESCCCCCTTCCSEEEEECCHHHHGGGGSCCEEEEEEEECCCCS---HHHHHTHHHHHHHHHHHHHTTSGGGGSCC
T ss_pred eEEEEEEEecCCCCCCCCceECCCHHHhhhhhcCCccEEEEEeCCCCC---chhHHHHHHHHHHHHHHHhhhccccCeeE
Confidence 89999999999987 557899999999984 4 699999999865331 2 44579999999999999999999999
Q ss_pred eeecCC-CCeEEEEEc-CCCeEEEEEeecccccccCCC-CCChhHHhccccccccCC---CCCCCCeEEEEEEEEccCeE
Q 012051 86 MSLNPS-DRKLNIWCN-NKGAILVEALTRVKLSELGDL-SQYNEFFENLVYKPVFNG---NFSEMPLVVAQVTRFACGGY 159 (472)
Q Consensus 86 ~~~~~~-~g~~~i~~~-~~gv~f~~a~~~~~~~~l~~~-~~~~~~~~~l~p~~~~~~---~~~~~P~l~vQvt~f~~GG~ 159 (472)
+.+++ +|+++|+|+ ++||.|++++++.+++++... .++...++.|+|..+... ...+.|++++|||+|.|||+
T Consensus 79 -~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~ 157 (453)
T 2xr7_A 79 -ACPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGI 157 (453)
T ss_dssp -EEESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEE
T ss_pred -EccCCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcE
Confidence 67653 789999998 599999999999999999642 245556778888654321 11228999999999999999
Q ss_pred EEEecccccccchhhHHHHHHHHhhhhhhhhcCC-C---CCCCCCCCCCCCCccccccccccCCCccCCcHHhhhhccCC
Q 012051 160 SIGIGTSHSLFDGPATYDFLSAWACNSAIKKRKG-V---TVSDHQPVHERGLMVLDNISHVHNAGTVKSPVAAARAAAID 235 (472)
Q Consensus 160 iL~~~~~H~v~Dg~g~~~fl~~wa~~~~~~r~G~-~---~~~~~~P~~dr~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~ 235 (472)
+||+++||+++||.|+.+|+++|| ++||.|. . +.++ .|++||+.+.. |+ .. .
T Consensus 158 ~lg~~~~H~v~Dg~~~~~Fl~~wa---~~~r~G~~~~~~~~~~-~P~~dr~~l~~-------------p~-----~~--~ 213 (453)
T 2xr7_A 158 SIGFTNHHVAGDGATIVKFVRAWA---LLNKFGGDEQFLANEF-IPFYDRSVIKD-------------PN-----GV--G 213 (453)
T ss_dssp EEEEEECTTTCCSHHHHHHHHHHH---HHHHTTTCGGGSCGGG-SCBCCCSSSCC-------------SS-----CH--H
T ss_pred EEEEeeeeeeechhHHHHHHHHHH---HHhhcCCCcccCCCCC-CCccccccccC-------------CC-----Cc--c
Confidence 999999999999999999999999 9998453 1 2344 58999988753 22 11 1
Q ss_pred cc-cccccccccCCCCCCcCCCCcccCCCCCeEEEEEEeCHHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHHHHHHhC
Q 012051 236 HL-YQLIKNTMINSQNSEVGGLNFSEMGSSNYVLKTFHLSGAIVESLKRKVLGERRGNFSCSSFELVAAHLWKARTKAFA 314 (472)
Q Consensus 236 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~St~d~l~A~iW~~~~rAr~ 314 (472)
+. +..+... +........ ....+.+.++|+|++++|++||+.+.++..+..++|++|+|+||+|+|++|||.
T Consensus 214 ~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~ 286 (453)
T 2xr7_A 214 MSIWNEMKKY--KHMMKMSDV-----VTPPDKVRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEA 286 (453)
T ss_dssp HHTTTTGGGC--TTTSCCSCC-----CCCCSCCCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHhcccc--CCccccccc-----cCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhc
Confidence 11 1111000 000000000 012456789999999999999999986542236899999999999999999997
Q ss_pred C-----CccceEEEEEeecCCCccCCCCCCCccccceeccccccchhhhhh-ccHHHHHHHHHHHHHh--CChh-HHHHH
Q 012051 315 L-----KKETMVCLQFAVDTRNKMVPPLPKGFSGNAYVLASVALTAGELEE-LSHEAIVEKIKEAKNS--INNE-YVNGY 385 (472)
Q Consensus 315 ~-----~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~-~~L~~~A~~Ir~ai~~--~~~~-~v~~~ 385 (472)
. ++++.+.+.++||+|+|++||+|++||||++..+.+.+++++|.+ .+|+.+|..||+++.+ ++++ ++++
T Consensus 287 ~~~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~- 365 (453)
T 2xr7_A 287 ATGEEIDENGMEFFGCAADCRAQFNPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG- 365 (453)
T ss_dssp HTTCCCCTTSEEEEEEECCTTSCSSSCCCTTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS-
T ss_pred cccccCCCCcceEEEEEecccccCCCCCCcccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh-
Confidence 5 577899999999999999999999999999999999999999994 8999999999999999 5788 9988
Q ss_pred HHhhhcCCCCCCCCCCcEEEecCCCCCCccccCCCCccccccccccCCCc--EEEEeeCCCCCCcEEEEEecCHHHHHHH
Q 012051 386 IEALDAPQGSLPPLKELTILSDWTRMPFHKIDFLNGEAAYASPLASPIPQ--VAYFMQNPSDLRGIDVRIGLFPQTLDAF 463 (472)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~~~~~g--~~~ilp~~~~~g~~ev~v~L~~~~m~~l 463 (472)
+|++.. +.. .-..++.+|||++|++|++|||||||+++++...+.+| .++++|+++++||++|.|+|++++|++|
T Consensus 366 -~~~~~~-~~~-~~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f 442 (453)
T 2xr7_A 366 -SWFKEY-DKV-DAKRSLSVAGSPKLDLYAADFGWGRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAF 442 (453)
T ss_dssp -CTTSCC-CCS-CGGGEEEECSCSSCCGGGCCCSSCSCSEEEEGGGSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHHH
T ss_pred -HHHHHH-Hhh-ccCCcEEEeccccCCccccccCCCcceEEEeeeecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHHH
Confidence 787742 222 11247999999999999999999999999987666678 7888898878899999999999999999
Q ss_pred HHHHHhhcC
Q 012051 464 SHYFLRNLQ 472 (472)
Q Consensus 464 ~~~~~~~~~ 472 (472)
+++|.+.|.
T Consensus 443 ~~~~~~~~~ 451 (453)
T 2xr7_A 443 AAMFTHGIS 451 (453)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 999998763
No 3
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=7.9e-74 Score=593.92 Aligned_cols=424 Identities=22% Similarity=0.295 Sum_probs=332.2
Q ss_pred ceEEEeeeEEEeCCCC-CCCcceeCCcccCCC-C-ccceEEEEecCCCCCCCCchhhHHHHHHHHHHHhhhhccccCcee
Q 012051 9 PAVCVTKSISVYPKSL-SPQKILNLSNLDRQC-P-LLMYLVFFYKPTFDCQNLSLDYVFSSLKSGLEETLSIWYPAAGRL 85 (472)
Q Consensus 9 ~~v~v~~~~~V~P~~~-~p~~~~~LS~lD~~~-~-~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl 85 (472)
.+|+|.++++|+|+.+ ++.+.++||.||+.+ . .|++.+|||+.++... ...++++++||+||+++|++||||||||
T Consensus 5 ~~v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~Lk~sLs~~L~~~~plAGRl 83 (454)
T 2e1v_A 5 PILTVLEQSQVSPPPDTLGDKSLQLTFFDFFWLRSPPINNLFFYELPITRS-QFTETVVPNIKHSLSITLKHFYPFVGKL 83 (454)
T ss_dssp -CEEEEEEEEECCCTTSCCCEEEECCHHHHTTTTCCCEEEEEEEECCCCHH-HHHHTHHHHHHHHHHHHHTTCGGGGSEE
T ss_pred ceEEEEEEEEEeCCCCCCCCceecCchHHhhhhccCCccEEEEEeCCCCcc-hhhHHHHHHHHHHHHHHhhhccccceee
Confidence 6799999999999987 567899999999985 4 6999999998653310 0034579999999999999999999999
Q ss_pred ee-ecCCCCeEEEEEc-CCCeEEEEEeecccccccCCCC-CChhHHhccccccccCC---CCCCCCeEEEEEEEEccCeE
Q 012051 86 MS-LNPSDRKLNIWCN-NKGAILVEALTRVKLSELGDLS-QYNEFFENLVYKPVFNG---NFSEMPLVVAQVTRFACGGY 159 (472)
Q Consensus 86 ~~-~~~~~g~~~i~~~-~~gv~f~~a~~~~~~~~l~~~~-~~~~~~~~l~p~~~~~~---~~~~~P~l~vQvt~f~~GG~ 159 (472)
+ .++++|+++|+|+ ++||.|++++++.+++++.... ++...++.|+|..+... +..+.|++.+|||+|.|||+
T Consensus 84 -~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cgG~ 162 (454)
T 2e1v_A 84 -VVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGI 162 (454)
T ss_dssp -EECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEETTTEE
T ss_pred -eeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEecCCcE
Confidence 7 5533899999998 5999999999999999996422 24445678888764321 12345999999999999999
Q ss_pred EEEecccccccchhhHHHHHHHHhhhhhhhhcCCC-----CCCCCCCCCCCCCccccccccccCCCccCCcHHhhhhccC
Q 012051 160 SIGIGTSHSLFDGPATYDFLSAWACNSAIKKRKGV-----TVSDHQPVHERGLMVLDNISHVHNAGTVKSPVAAARAAAI 234 (472)
Q Consensus 160 iL~~~~~H~v~Dg~g~~~fl~~wa~~~~~~r~G~~-----~~~~~~P~~dr~~l~~~~~~~~~~~~~~~~p~~~~~~~~~ 234 (472)
+||+++||+++||.|+.+|+++|| ++||.|.. +.++ .|++|| .+. . |+.
T Consensus 163 ~lg~~~~H~v~Dg~~~~~Fl~awa---~~~r~g~~~~~~~~~~~-~P~~dr-~l~--~-----------p~~-------- 216 (454)
T 2e1v_A 163 AIGITNHHCLGDASTRFCFLKAWT---SIARSGNNDESFLANGT-RPLYDR-IIK--Y-----------PML-------- 216 (454)
T ss_dssp EEEEEECGGGCCHHHHHHHHHHHH---HHHHTTSCCHHHHHHSC-CCBCCC-CCC--C-----------HHH--------
T ss_pred EEEEEeeeeecchhHHHHHHHHHH---HHhccCCCccccCCCCC-CCcccc-cCC--C-----------CCc--------
Confidence 999999999999999999999999 99985531 2245 689999 653 1 220
Q ss_pred Cccc-cccccccc-CCCCCCcCCCCcccCCCCCeEEEEEEeCHHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHHHHHH
Q 012051 235 DHLY-QLIKNTMI-NSQNSEVGGLNFSEMGSSNYVLKTFHLSGAIVESLKRKVLGERRGNFSCSSFELVAAHLWKARTKA 312 (472)
Q Consensus 235 ~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~St~d~l~A~iW~~~~rA 312 (472)
++.+ ..+..... ...... .. ....+.+.++|+|++++|++||+.+.++..+..++|++|+|+||+|+|++||
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~A 290 (454)
T 2e1v_A 217 DEAYLKRAKVESFNEDYVTQ--SL----AGPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKS 290 (454)
T ss_dssp HHHHHHHTTCTTHHHHCCCC--CC----CCCCCEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHH
T ss_pred chHHHHhhhccccccccCcc--cC----CCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhh
Confidence 1111 01100000 000000 00 0124678999999999999999999865432258999999999999999999
Q ss_pred hCCCccceEEEEEeecCCCccCCCCCCCccccceeccccccchhhhhh-ccHHHHHHHHHHHHHhCChh----HHHH-HH
Q 012051 313 FALKKETMVCLQFAVDTRNKMVPPLPKGFSGNAYVLASVALTAGELEE-LSHEAIVEKIKEAKNSINNE----YVNG-YI 386 (472)
Q Consensus 313 r~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~-~~L~~~A~~Ir~ai~~~~~~----~v~~-~~ 386 (472)
| +++.+.+.++||+|+|++||+|++||||++..+.+.+++++|.+ .+|+.+|..||+++.+++++ ++++ ..
T Consensus 291 r---~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~ 367 (454)
T 2e1v_A 291 R---NDKLQLFGFPIDRRARMKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDME 367 (454)
T ss_dssp H---CCSEEEEEEEEECGGGSSSCCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC---
T ss_pred c---CCCceEEEEEecchhccCCCCCcccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Confidence 9 67899999999999999999999999999999999999999994 89999999999999998744 4444 44
Q ss_pred HhhhcCCCCCCCCC-CcEEEecCCCCCCccccCCCCccccccccccCCCcEEEEeeCCCCCCcEEEEEecCHHHHHHHHH
Q 012051 387 EALDAPQGSLPPLK-ELTILSDWTRMPFHKIDFLNGEAAYASPLASPIPQVAYFMQNPSDLRGIDVRIGLFPQTLDAFSH 465 (472)
Q Consensus 387 ~~~~~~~~~~~~~~-~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~~~~~g~~~ilp~~~~~g~~ev~v~L~~~~m~~l~~ 465 (472)
+|++.. +.. ++ .++.+|||++|++|++|||||||+++++...+.+|.++++|+++++||++|.|+|++++|++|++
T Consensus 368 ~~~~~~-~~~--~~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~ 444 (454)
T 2e1v_A 368 SFNDLV-SEG--MPTTMTWVSGTPKLRFYDMDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVH 444 (454)
T ss_dssp --CHHH-HHC--CCSEEEEEECCTTSCGGGCCSSSCSCSEEEEGGGGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHH
T ss_pred HHHHHH-Hhh--cCCceEEEecCCCCCcccccccCccceEEEeeeeCCCCeEEEEecCCCCCCEEEEEEECHHHHHHHHH
Confidence 554421 111 22 37999999999999999999999999987666678888999887889999999999999999999
Q ss_pred HHHhhcC
Q 012051 466 YFLRNLQ 472 (472)
Q Consensus 466 ~~~~~~~ 472 (472)
++.+.|.
T Consensus 445 ~~~~~~~ 451 (454)
T 2e1v_A 445 IFDDGLK 451 (454)
T ss_dssp HHHHHC-
T ss_pred HHHHHHH
Confidence 9998763
No 4
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=4.5e-73 Score=582.40 Aligned_cols=402 Identities=22% Similarity=0.324 Sum_probs=328.4
Q ss_pred ceEEEeeeEEEeCCCCCCC--cceeCCcccCCCC-ccceEEEEecCCCCCCCCchhhHHHHHHHHHHHhhhhccccCcee
Q 012051 9 PAVCVTKSISVYPKSLSPQ--KILNLSNLDRQCP-LLMYLVFFYKPTFDCQNLSLDYVFSSLKSGLEETLSIWYPAAGRL 85 (472)
Q Consensus 9 ~~v~v~~~~~V~P~~~~p~--~~~~LS~lD~~~~-~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl 85 (472)
|+|+|.++++|+|+.++|. +.++||.||+..+ .|++.+|||+.++... .+.+.++++||+||+++|++||||||||
T Consensus 3 m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~Lk~sLs~~L~~~~plAGRl 81 (421)
T 2bgh_A 3 PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSN-LDPAQTSQHLKQSLSKVLTHFYPLAGRI 81 (421)
T ss_dssp -CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCC-CCHHHHHHHHHHHHHHHTTTSGGGGSEE
T ss_pred ceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCccc-cchhhHHHHHHHHHHHHhhhcchhcccc
Confidence 6799999999999998885 4899999999877 9999999999754310 0245689999999999999999999999
Q ss_pred eeecCCCCeEEEEEcCCCeEEEEEeecccccccCCCCCChhHHhccccccccCCC----CCCCCeEEEEEEEEccCeEEE
Q 012051 86 MSLNPSDRKLNIWCNNKGAILVEALTRVKLSELGDLSQYNEFFENLVYKPVFNGN----FSEMPLVVAQVTRFACGGYSI 161 (472)
Q Consensus 86 ~~~~~~~g~~~i~~~~~gv~f~~a~~~~~~~~l~~~~~~~~~~~~l~p~~~~~~~----~~~~P~l~vQvt~f~~GG~iL 161 (472)
+ + +++|+|+++||.|++++++++++|+.+..++...++.|+|.. ...+ ..+.|++.+|||+|.|||++|
T Consensus 82 -~----~-~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~-~~~~~~~~~~~~pll~vQvt~f~cgG~~l 154 (421)
T 2bgh_A 82 -N----V-NSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSA-AYPGGKIEVNEDVPLAVKISFFECGGTAI 154 (421)
T ss_dssp -E----T-TTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSC-SSSSSSSCCCTTCSEEEEEEECTTSCEEE
T ss_pred -C----C-CcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCC-CCccccccccCCceEEEEEEEEcCCCEEE
Confidence 4 2 589999999999999999999999854323334567788765 2221 356899999999999999999
Q ss_pred EecccccccchhhHHHHHHHHhhhhhhhhcCCCCCCCCCCCCCC-CCccccccccccCCCccCCcHHhhhhccCCccccc
Q 012051 162 GIGTSHSLFDGPATYDFLSAWACNSAIKKRKGVTVSDHQPVHER-GLMVLDNISHVHNAGTVKSPVAAARAAAIDHLYQL 240 (472)
Q Consensus 162 ~~~~~H~v~Dg~g~~~fl~~wa~~~~~~r~G~~~~~~~~P~~dr-~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 240 (472)
|+++||+++||.|+.+|+++|| ++|| |. +..+ +|.+|| +.+.+.. .++| .
T Consensus 155 g~~~~H~v~Dg~~~~~fl~~wa---~~~r-g~-~~~~-~P~~dr~~~l~p~~---------~~~~------------~-- 205 (421)
T 2bgh_A 155 GVNLSHKIADVLSLATFLNAWT---ATCR-GE-TEIV-LPNFDLAARHFPPV---------DNTP------------S-- 205 (421)
T ss_dssp EEEEETTTCCHHHHHHHHHHHH---HHHT-TC-SCCC-CCBCSHHHHHSCCC---------TTCC------------C--
T ss_pred EEEeeEEechHHHHHHHHHHHH---HHhc-CC-CCCC-CCccccccccCCCc---------ccCC------------C--
Confidence 9999999999999999999999 9999 85 3335 688998 5543210 0011 0
Q ss_pred ccccccCCCCCCcCCCCcccCCCCCeEEEEEEeCHHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHHHHHHhCCC--cc
Q 012051 241 IKNTMINSQNSEVGGLNFSEMGSSNYVLKTFHLSGAIVESLKRKVLGERRGNFSCSSFELVAAHLWKARTKAFALK--KE 318 (472)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~St~d~l~A~iW~~~~rAr~~~--~~ 318 (472)
+ + . ....+.+.++|+|++++|++||+.+.++.. ..++|++|+|+||+|+|++|||... ++
T Consensus 206 -~----~--~----------~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~-~~~~St~d~l~A~iW~~~~~Ar~~~~~~~ 267 (421)
T 2bgh_A 206 -P----E--L----------VPDENVVMKRFVFDKEKIGALRAQASSASE-EKNFSRVQLVVAYIWKHVIDVTRAKYGAK 267 (421)
T ss_dssp -C----C--C----------CCCSSEEEEEEEECHHHHHHHHHHTC------CCCCHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred -C----c--c----------CCccceEEEEEEECHHHHHHHHHHhhccCC-CCCCchhHhHHHHHHHHHHHHhcccCCCC
Confidence 0 0 0 012468899999999999999999976542 3579999999999999999998653 46
Q ss_pred ceEEEEEeecCCCccCCCCCCCccccceeccccccchhhhhhccHHHHHHHHHHHHHhCChhHHHHHHHhhhcCCCCCCC
Q 012051 319 TMVCLQFAVDTRNKMVPPLPKGFSGNAYVLASVALTAGELEELSHEAIVEKIKEAKNSINNEYVNGYIEALDAPQGSLPP 398 (472)
Q Consensus 319 ~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~~~~~~v~~~~~~~~~~~~~~~~ 398 (472)
+.+.+.++||+|+|++||+|++||||++..+.+.+++++ +.+|+++|..||+++.++++++++...++.+.... .+
T Consensus 268 ~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~~~~~~~~~--~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~-~~- 343 (421)
T 2bgh_A 268 NKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEW--DKDFPDLIGPLRTSLEKTEDDHNHELLKGMTCLYE-LE- 343 (421)
T ss_dssp SCEEEEEEEESGGGSSSCCCTTBCSCCEEEEEEEECTTC--CCCGGGGHHHHHHHTCCCSSCHHHHHHHHHHHHHT-SC-
T ss_pred CceEEEEEecCccccCCCCCCCccceEEEEEEEEecccc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cC-
Confidence 789999999999999999999999999999998888876 78999999999999999999999988777643211 11
Q ss_pred CCCcEEEecCCCCCCccccCCCCccccccccccCCCcEEEEeeCCCCCCcEEEEEecCHHHHHHHHHHHHhh
Q 012051 399 LKELTILSDWTRMPFHKIDFLNGEAAYASPLASPIPQVAYFMQNPSDLRGIDVRIGLFPQTLDAFSHYFLRN 470 (472)
Q Consensus 399 ~~~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~~~~~g~~~ilp~~~~~g~~ev~v~L~~~~m~~l~~~~~~~ 470 (472)
-...+.+|||++|++|++|||||||+++++...+.+|+++++|+++ ++|++|.|+|++++|++|++|+.+.
T Consensus 344 ~~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~~~~~g~~~~~p~~~-~~gi~v~v~L~~~~m~~f~~e~~~~ 414 (421)
T 2bgh_A 344 PQELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPKRNAALLMDTRS-GDGVEAWLPMAEDEMAMLPVELLSL 414 (421)
T ss_dssp GGGEEEEEEETTSCGGGCCSSSCCCSEEECCCCCSTTEEEEEECTT-SSSEEEEEEEEHHHHHHSCHHHHTT
T ss_pred CCCeEEEeccccCCCcccccCCCccCeecccccCcCCEEEEEecCC-CCeEEEEEEcCHHHHHHHHHHHHHh
Confidence 1246899999999999999999999999987766788999999884 4589999999999999999988764
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=2.5e-64 Score=522.59 Aligned_cols=399 Identities=15% Similarity=0.167 Sum_probs=307.7
Q ss_pred ceeCCcccCCC--C-ccceEEEEecCCCCCCCCchhhHHHHHHHHHHHhhhhccccCceeeeecC----CCCeEEEEEcC
Q 012051 29 ILNLSNLDRQC--P-LLMYLVFFYKPTFDCQNLSLDYVFSSLKSGLEETLSIWYPAAGRLMSLNP----SDRKLNIWCNN 101 (472)
Q Consensus 29 ~~~LS~lD~~~--~-~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~~~~~----~~g~~~i~~~~ 101 (472)
.++||.|||+. + .|++.+|||+.+++. +.++++++||+||+++|++|||||||| +.++ .+|+++|+|++
T Consensus 4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~---~~~~~~~~Lk~sLs~~L~~~~plAGRl-~~~~~~~~~~g~~~i~~~~ 79 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLSIYTQISLLYPVSDSS---QYPTIVSTFEQGLKRFSEAVPWVAGQV-KAEGISEGNTGTSFIVPFE 79 (451)
T ss_dssp CEECCGGGGCTTGGGCEEEEEEEEECSCGG---GHHHHHHHHHHHHHHHHHHSGGGGCEE-EEESCBTTBCCEEEEECCC
T ss_pred cccCChhhcCccccccceeEEEEEECCCCC---CHHHHHHHHHHHHHHHHHhCCceeEEE-EECCCCCCCCCcEEEeecC
Confidence 46999999997 6 999999999964331 245689999999999999999999999 6654 26899999877
Q ss_pred CCeEEEEEeecc-----cccccCCCCCChhHHh--cccccc--ccC---CCCCCCCeEEEEEEEEccCeEEEEecccccc
Q 012051 102 KGAILVEALTRV-----KLSELGDLSQYNEFFE--NLVYKP--VFN---GNFSEMPLVVAQVTRFACGGYSIGIGTSHSL 169 (472)
Q Consensus 102 ~gv~f~~a~~~~-----~~~~l~~~~~~~~~~~--~l~p~~--~~~---~~~~~~P~l~vQvt~f~~GG~iL~~~~~H~v 169 (472)
.++.|++++++. ++++|++..+|...+. .+.|.. +.. ....+.|++.+||| |.|||++||+++||++
T Consensus 80 ~~~~~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT-~~~GG~~lg~~~~H~v 158 (451)
T 2rkv_A 80 DVPRVVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLN-FIKGGLILTVNGQHGA 158 (451)
T ss_dssp SSCEEEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEE-EEBTEEEEEEEEETTT
T ss_pred CCCeEEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEE-EecCceeeeeeehhcc
Confidence 666799988764 5777754344433232 233322 111 12345899999999 6699999999999999
Q ss_pred cchhhHHHHHHHHhhhhhhhhcCCCCCC---CCCCCCCCCCccccccccccCCCccCCcHHhhhhccCCcc-cccccccc
Q 012051 170 FDGPATYDFLSAWACNSAIKKRKGVTVS---DHQPVHERGLMVLDNISHVHNAGTVKSPVAAARAAAIDHL-YQLIKNTM 245 (472)
Q Consensus 170 ~Dg~g~~~fl~~wa~~~~~~r~G~~~~~---~~~P~~dr~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~ 245 (472)
+||.|+.+|+++|| ++|| |. +.+ +.+|++||+.+.+.. .+. +| ...++|. |.....
T Consensus 159 ~Dg~g~~~Fl~awa---~~~r-g~-~~~~~~~~~p~~dr~~~~p~~-------~~~-~p-----~~~~~~~~~~~~~~-- 218 (451)
T 2rkv_A 159 MDMVGQDAVIRLLS---KACR-ND-PFTEEEMTAMNLDRKTIVPYL-------ENY-TI-----GPEVDHQIVKADVA-- 218 (451)
T ss_dssp CCHHHHHHHHHHHH---HHHH-TC-CCCHHHHHHTTCCSTTSSCCC-------TTC-CC-----CGGGTTCBCCTTSC--
T ss_pred ccHHHHHHHHHHHH---HHhc-CC-CCCccccccccCchhhccccc-------ccc-CC-----CccccccccCCCCC--
Confidence 99999999999999 9999 85 321 114789998654421 000 33 2223333 322110
Q ss_pred cCCCCCCcCCCCcccCCCCCeEEEEEEeCHHHHHHHHHHHhcccCC-CCccCHHHHHHHHHHHHHHHHh-C-CCccceEE
Q 012051 246 INSQNSEVGGLNFSEMGSSNYVLKTFHLSGAIVESLKRKVLGERRG-NFSCSSFELVAAHLWKARTKAF-A-LKKETMVC 322 (472)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~-~~~~St~d~l~A~iW~~~~rAr-~-~~~~~~~~ 322 (472)
.... . ....++..++|+|++++|++||+.+.++... +.++|++|+|+||+|||++||| . .++++.+.
T Consensus 219 ---~~~~--~-----~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~ 288 (451)
T 2rkv_A 219 ---GGDA--V-----LTPVSASWAFFTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTE 288 (451)
T ss_dssp ---C--------------CCEEEEEEEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEE
T ss_pred ---CCCC--C-----CCCCCceEEEEEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceE
Confidence 0000 0 1134678999999999999999999876422 4679999999999999999998 3 56788999
Q ss_pred EEEeecCCCccCCCCCCCccccceeccccccchhhhhhccHHHHHHHHHHHHHhCChhH-HHHHHHhhhcCC-CC-C--C
Q 012051 323 LQFAVDTRNKMVPPLPKGFSGNAYVLASVALTAGELEELSHEAIVEKIKEAKNSINNEY-VNGYIEALDAPQ-GS-L--P 397 (472)
Q Consensus 323 l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~~~~~~-v~~~~~~~~~~~-~~-~--~ 397 (472)
+.++||+|+|++ +|++||||++..+.+.+++++|.+.+|+.+|..||+++.+++.++ +++.++|++... +. . .
T Consensus 289 l~~~vd~R~rl~--lP~~y~GN~~~~~~~~~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (451)
T 2rkv_A 289 FCRAVDARPAMG--VSNNYPGLLQNMTYHNSTIGEIANESLGATASRLRSELDPASMRQRTRGLATYLHNNPDKSNVSLT 366 (451)
T ss_dssp EEEEEECHHHHT--CCTTCCSCCEEEEEEEEEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCSCCTTBCTT
T ss_pred EEEEecccccCC--CCCCCcccceeeecccCcHHHhccchHHHHHHHHHHHhcccCchhHHHHHHHHHhcCCCccccccc
Confidence 999999999998 899999999999999999999999999999999999999998888 999999987521 11 1 0
Q ss_pred -CC--CCcEEEecCCCCCCccccCC--CCccccccccc-cCCCcEEEEeeCCCCCCcEEEEEecCHHHHHHHHH
Q 012051 398 -PL--KELTILSDWTRMPFHKIDFL--NGEAAYASPLA-SPIPQVAYFMQNPSDLRGIDVRIGLFPQTLDAFSH 465 (472)
Q Consensus 398 -~~--~~~~~~ssw~~~~~~~~DFG--~G~P~~~~~~~-~~~~g~~~ilp~~~~~g~~ev~v~L~~~~m~~l~~ 465 (472)
.+ +.++.+|||+++++|++||| ||||++++.+. .+.+|+++++|.. ++||++|.|+|++++|++|++
T Consensus 367 ~~~~~~~~~~~ssw~~~~~y~~DFG~gwG~P~~v~~~~~~~~~g~~~~~p~~-~~ggi~v~v~L~~~~m~~f~~ 439 (451)
T 2rkv_A 367 ADADPSTSVMLSSWAKVGLWDYDFGLGLGKPETVRRPIFEPVESLMYFMPKK-PDGEFCAALSLRDEDMDRLKA 439 (451)
T ss_dssp TTCCTTTCEEEEECTTCCGGGCCTTCSSCSCSEEECCBCSCCTTEEEECCCC-TTSCEEEEEEEEHHHHHHHHH
T ss_pred cccCCCCCEEEeccccCCccccccCCCCCCceEEEcCCccCCCCEEEEecCC-CCCCEEEEEEeCHHHHHHHhc
Confidence 11 34699999999999999998 89999998554 3467888999864 688999999999999999987
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=98.87 E-value=3.1e-07 Score=92.75 Aligned_cols=296 Identities=14% Similarity=0.071 Sum_probs=159.0
Q ss_pred CcceeCCcccCCCC---ccceEEEEecCCCCCCCCchhhHHHHHHHHHHHhhhhccccCceeeeecCCCCeEEEEEcCCC
Q 012051 27 QKILNLSNLDRQCP---LLMYLVFFYKPTFDCQNLSLDYVFSSLKSGLEETLSIWYPAAGRLMSLNPSDRKLNIWCNNKG 103 (472)
Q Consensus 27 ~~~~~LS~lD~~~~---~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~~~~~~~g~~~i~~~~~g 103 (472)
+..+|||++.+.+. +++...+-++.+ + +.+.|++++.+++..+|.|-.++ .... ++.+++......
T Consensus 5 ~~~~pls~~Q~~~~~~~y~~~~~~~l~g~-------l--d~~~l~~A~~~lv~rh~~LRt~f-~~~~-~~~~q~v~~~~~ 73 (422)
T 1q9j_A 5 SVIRKLSHSEEVFAQYEVFTSMTIQLRGV-------I--DVDALSDAFDALLETHPVLASHL-EQSS-DGGWNLVADDLL 73 (422)
T ss_dssp SEEEECCHHHHHHHHTTCEEEEEEEEESC-------C--CHHHHHHHHHHHHHHCGGGSEEE-EECT-TSSEEEEECCSS
T ss_pred ceeecCCHHHHHHHhcCceEEEEEEEecC-------C--CHHHHHHHHHHHHHhCccceEEE-EecC-CcceeeeccCCC
Confidence 45789999888643 344444444432 2 47899999999999999999999 5554 333333333222
Q ss_pred eE-EEEEeecccccccCCCCCChhHHhccccccccCCCCCCCCeEEEEEEEEccCeEEEEecccccccchhhHHHHHHHH
Q 012051 104 AI-LVEALTRVKLSELGDLSQYNEFFENLVYKPVFNGNFSEMPLVVAQVTRFACGGYSIGIGTSHSLFDGPATYDFLSAW 182 (472)
Q Consensus 104 v~-f~~a~~~~~~~~l~~~~~~~~~~~~l~p~~~~~~~~~~~P~l~vQvt~f~~GG~iL~~~~~H~v~Dg~g~~~fl~~w 182 (472)
.. +.+. |+...... ..+..- ..+ -+ ...|++.+.+.. .+++..|.+.+||.++||.|+..|++.|
T Consensus 74 ~~~~~~~-------d~~~~~~~-~~~~~~--~~~--~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l 139 (422)
T 1q9j_A 74 HSGICVI-------DGTAATNG-SPSGNA--ELR--LD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDEL 139 (422)
T ss_dssp SCCCEEE-------C-------------C--CCC--CC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHH
T ss_pred CCceEEE-------ECCCCCcc-hhhhcc--cCc--cC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHH
Confidence 22 2211 22111010 011110 011 12 568899988876 6778999999999999999999999999
Q ss_pred hhhhhhhhcCCCCCCCCCCCCCCCCcc----ccccccccCCCccCCcHHhhhh-ccCCcccccccccccCCCCCCcCCCC
Q 012051 183 ACNSAIKKRKGVTVSDHQPVHERGLMV----LDNISHVHNAGTVKSPVAAARA-AAIDHLYQLIKNTMINSQNSEVGGLN 257 (472)
Q Consensus 183 a~~~~~~r~G~~~~~~~~P~~dr~~l~----~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (472)
.+.|.....|..+... +|.--++... .+. ... .. .+. ..+. ..+... ..... ..++... .
T Consensus 140 ~~~Y~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~-~~--~~~-~~~~~~~~W~~--~l~~~--~~lp~~~-~-- 204 (422)
T 1q9j_A 140 FSRYTDAVTTGDPGPI-TPQPTPLSMEAVLAQRG---IRK-QG--LSG-AERFMSVMYAY--EIPAT--ETPAVLA-H-- 204 (422)
T ss_dssp HHHHHHHHHSSSCCCC-CCCCCCBCHHHHHHHSS---CCC---------CTTSSTTTTCC--------------------
T ss_pred HHHHHHhhccCCCCCC-CCCCCCCCHHHHHHhcC---Ccc-cc--cch-hhhhhhhhhcc--cCCCc--ccCCCCC-C--
Confidence 9433221112122222 2210011111 000 000 00 000 0000 001100 00000 0001000 0
Q ss_pred cccCCCCCeEEEEEEeCHHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHHHHHHhCCCccceEEEEEeecCCCccCCCC
Q 012051 258 FSEMGSSNYVLKTFHLSGAIVESLKRKVLGERRGNFSCSSFELVAAHLWKARTKAFALKKETMVCLQFAVDTRNKMVPPL 337 (472)
Q Consensus 258 ~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~St~d~l~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~rl~p~l 337 (472)
...........+.++.+..++|++.|.+. .+|.++++.|.+-..+.|-+. .......+.++++.|....|++
T Consensus 205 --~~~~~~~~~~~~~l~~~~~~~l~~~a~~~-----~~t~~~~l~aa~~~~l~r~~~-~~~~~v~~g~~~~~R~~~~~~~ 276 (422)
T 1q9j_A 205 --PGLPQAVPVTRLWLSKQQTSDLMAFGREH-----RLSLNAVVAAAILLTEWQLRN-TPHVPIPYVYPVDLRFVLAPPV 276 (422)
T ss_dssp --CCSBCCCCEEEECCCHHHHHHHHHHHTTT-----TCCHHHHHHHHHHHHHHHHHT-CSSCCEEEEEEEETTTTSSSCC
T ss_pred --CCCCCCccceEEEeCHHHHHHHHHHHHHh-----CCCHHHHHHHHHHHHHHhccc-CCCceEEEeeeeecccccCCCC
Confidence 00112245688899999999999998753 579999999987777765522 2456789999999999876543
Q ss_pred C----CCccccceeccccccchhhhhhccHHHHHHHHHHHHHh
Q 012051 338 P----KGFSGNAYVLASVALTAGELEELSHEAIVEKIKEAKNS 376 (472)
Q Consensus 338 p----~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~ 376 (472)
+ .+.+|.++... ++. .+.++.+++..+++.+..
T Consensus 277 ~~~~~~~~vG~f~n~l----p~~--~~~~~~~~l~~v~~~~~~ 313 (422)
T 1q9j_A 277 APTEATNLLGAASYLA----EIG--PNTDIVDLASDIVATLRA 313 (422)
T ss_dssp CTTTBSCCEEEEEEEE----CCC--SSCCHHHHHHHHHHHHHH
T ss_pred Chhhhhhhheeeeeee----ecc--CCCCHHHHHHHHHHHHHH
Confidence 3 34445544322 221 134677777777777764
No 7
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.58 E-value=2.7e-05 Score=78.88 Aligned_cols=356 Identities=10% Similarity=-0.002 Sum_probs=179.4
Q ss_pred HHHHHHHHHHHhhhhccccCceeeeecCCCCeEEEEEcCCCeEEEEEeecccccccCCCCCChhHHhcccccc-ccCCCC
Q 012051 63 VFSSLKSGLEETLSIWYPAAGRLMSLNPSDRKLNIWCNNKGAILVEALTRVKLSELGDLSQYNEFFENLVYKP-VFNGNF 141 (472)
Q Consensus 63 ~~~~L~~sL~~~L~~~p~laGrl~~~~~~~g~~~i~~~~~gv~f~~a~~~~~~~~l~~~~~~~~~~~~l~p~~-~~~~~~ 141 (472)
+.+.|++++.+++..+|.|--++ ... +| .+. ....+.+.+ .|+.....+...+..++-.. ...-+.
T Consensus 34 d~~~L~~A~~~lv~rh~~LRt~f-~~~--~~--~v~-~~~~~~~~~-------~d~~~~~~~~~~~~~~~~~~~~~~fdl 100 (436)
T 1l5a_A 34 DTTLLLRALHLTVSEIDLFRARF-SAQ--GE--LYW-HPFSPPIDY-------QDLSIHLEAEPLAWRQIEQDLQRSSTL 100 (436)
T ss_dssp CHHHHHHHHHHHHHTCGGGGEEE-CTT--CC--EEE-CSSCCCCEE-------EECTTCTTHHHHHHHHHHHHHTSCCCC
T ss_pred CHHHHHHHHHHHHHHhheeEEEE-Eec--CC--eEC-CCcCCCccE-------EeCCCCCCHHHHHHHHHHHHhcCCCCc
Confidence 47899999999999999999998 443 34 332 222222221 13322111111111111000 001123
Q ss_pred CCCCeEEEEEEEEccCeEEEEecccccccchhhHHHHHHHHhhhhhhhhcCCCCCCCCCCCCCCCCccccccccccCCCc
Q 012051 142 SEMPLVVAQVTRFACGGYSIGIGTSHSLFDGPATYDFLSAWACNSAIKKRKGVTVSDHQPVHERGLMVLDNISHVHNAGT 221 (472)
Q Consensus 142 ~~~P~l~vQvt~f~~GG~iL~~~~~H~v~Dg~g~~~fl~~wa~~~~~~r~G~~~~~~~~P~~dr~~l~~~~~~~~~~~~~ 221 (472)
...|++.+.+-...++...|.+.+||.++||.|+..|++.+.+.|.....|. +...+.+.+ ++.+.... ..
T Consensus 101 ~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~-~~~~~~~~~-~~~~~~~~-------~~ 171 (436)
T 1l5a_A 101 IDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQ-TPTAAFKPY-QSYLEEEA-------AY 171 (436)
T ss_dssp BTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCCH-HHHHHHHH-------HH
T ss_pred CCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCC-CCCCCccCH-HHHHHHHH-------Hh
Confidence 4578888887666677899999999999999999999999994332211143 221101111 11110000 00
Q ss_pred cCCcHHhhhhccCCcc-cccccccccCCCCCCcCCCCcccCCCCCeEEEEEEeCHHHHHHHHHHHhcccCCCCccCHHHH
Q 012051 222 VKSPVAAARAAAIDHL-YQLIKNTMINSQNSEVGGLNFSEMGSSNYVLKTFHLSGAIVESLKRKVLGERRGNFSCSSFEL 300 (472)
Q Consensus 222 ~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~St~d~ 300 (472)
..... ..+...+... +...+.. ..++... . ..........+.++.+..++|++.|... .+|.+.+
T Consensus 172 ~~~~~-~~~~~~~W~~~l~~~~~~--~~lp~~~-~-----~~~~~~~~~~~~l~~~~~~~l~~~a~~~-----~~t~~~~ 237 (436)
T 1l5a_A 172 LTSHR-YWQDKQFWQGYLREAPDL--TLTSATY-D-----PQLSHAVSLSYTLNSQLNHLLLKLANAN-----QIGWPDA 237 (436)
T ss_dssp HTSHH-HHHHHHHHHHHHHTSCCC--CBCCTTC-C-----GGGCCEEEEEEECCHHHHHHHHHHHHHT-----TCCHHHH
T ss_pred hccHh-HHHHHHHHHHHhcCCCCc--ccCCCCC-C-----CCcccceeeEEecCHHHHHHHHHHHHHh-----CCCHHHH
Confidence 00000 0000001100 0111100 0011100 0 0112345778999999999999998864 4799999
Q ss_pred HHHHHHHHHHHHhCCCccceEEEEEeecCCCccCCCCCCCccccceeccccccchhhhhhccHHHHHHHHHHHHHhC-Ch
Q 012051 301 VAAHLWKARTKAFALKKETMVCLQFAVDTRNKMVPPLPKGFSGNAYVLASVALTAGELEELSHEAIVEKIKEAKNSI-NN 379 (472)
Q Consensus 301 l~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~~-~~ 379 (472)
+.|.+-..+.+-- . ....+..++++|.. +.+ .+-.|+++........... +.++.+++..+++.+... ..
T Consensus 238 l~aa~~~~L~~~~---g-~dv~ig~~~~~R~~--~~~-~~~vG~f~n~lplr~~~~~--~~t~~~~l~~v~~~~~~~~~h 308 (436)
T 1l5a_A 238 LVALCALYLESAE---P-DAPWLWLPFMNRWG--SVA-ANVPGLMVNSLPLLRLSAQ--QTSLGNYLKQSGQAIRSLYLH 308 (436)
T ss_dssp HHHHHHHHHHHHS---T-TCCEEEEEECCCTT--SGG-GGSCSCCCEEEEEECCCCT--TCBHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhh---C-CceEEeeecccCCC--hHH-hcCcceEEEEEEEEEecCC--CCCHHHHHHHHHHHHHHHhhh
Confidence 9998665555442 3 66899999999965 222 4556666554444433221 456788888888877642 22
Q ss_pred hH--HHHHHHhhhcCCCC-CCCCCCcEEEecCCCCCCccccCCCCccccccccccCCCcEEE-EeeCCCCCCcEEEEEe-
Q 012051 380 EY--VNGYIEALDAPQGS-LPPLKELTILSDWTRMPFHKIDFLNGEAAYASPLASPIPQVAY-FMQNPSDLRGIDVRIG- 454 (472)
Q Consensus 380 ~~--v~~~~~~~~~~~~~-~~~~~~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~~~~~g~~~-ilp~~~~~g~~ev~v~- 454 (472)
+. +..+.+.+.. .+. .+.|...+.+.+. +.. .|+.-+-............+.+ +.+. .+|++.+.+.
T Consensus 309 ~~~~~~~i~~~l~~-~~~~~~lf~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~l~l~v~~~--~~~~l~~~~~y 380 (436)
T 1l5a_A 309 GRYRIEQIEQDQGL-NAEQSYFMSPFINILPF---ESP--HFADCQTELKVLASGSAEGINFTFRGS--PQHELCLDITA 380 (436)
T ss_dssp TTSCHHHHHHHTTC-CTTCCBCCCSEEEEECC---CCC--CCTTCEEEEEEEEECCCCSEEEEEEEC--TTSCEEEEEEE
T ss_pred cCCCHHHHHHHhcc-cccCCCccceEEEeecc---Ccc--ccCCCeeEEEecCCCCccceEEEEEec--CCCcEEEEEEe
Confidence 21 2333333331 111 1223333333322 211 3332111111111111114433 3322 3567777774
Q ss_pred ----cCHHHHHHHHHHHHhhc
Q 012051 455 ----LFPQTLDAFSHYFLRNL 471 (472)
Q Consensus 455 ----L~~~~m~~l~~~~~~~~ 471 (472)
+.++.++++.+.+...|
T Consensus 381 ~~~~~~~~~i~~l~~~~~~~l 401 (436)
T 1l5a_A 381 DLASYPQSHWQSHCERFPRFF 401 (436)
T ss_dssp ETTTSCHHHHHHHHHHHHHHH
T ss_pred ChhhCCHHHHHHHHHHHHHHH
Confidence 36777888888877654
No 8
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.37 E-value=1.9e-05 Score=81.50 Aligned_cols=297 Identities=12% Similarity=0.039 Sum_probs=158.9
Q ss_pred CcceeCCcccCC-------CC-ccceEEEEecCCCCCCCCchhhHHHHHHHHHHHhhhhccccCceeeeecCCCCeEEEE
Q 012051 27 QKILNLSNLDRQ-------CP-LLMYLVFFYKPTFDCQNLSLDYVFSSLKSGLEETLSIWYPAAGRLMSLNPSDRKLNIW 98 (472)
Q Consensus 27 ~~~~~LS~lD~~-------~~-~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~~~~~~~g~~~i~ 98 (472)
+..+|||+.-+. .+ ......+.|+.... + ..+.|++++.+++..+|.|--++ ... +|.+. .
T Consensus 11 ~~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g~-----l--d~~~L~~A~~~lv~rh~~LRt~f-~~~--~~~~~-~ 79 (493)
T 4hvm_A 11 PGLRRASFLQRGAWRWLREAPPAAAFAARGLLGSGR-----I--DDDRLAAAADEVLDAFPLLRVNF-VDD--DGLWM-R 79 (493)
T ss_dssp -CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEESS-----C--CHHHHHHHHHHHHHHCGGGGEEE-EES--SSEEE-E
T ss_pred CCCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeCC-----C--CHHHHHHHHHHHHHhchhceeEE-Ecc--CCEEE-E
Confidence 568888877642 23 21233344554422 2 47999999999999999999999 554 46655 3
Q ss_pred EcCCCeEEEEEeecccccccCCCCCChhHHhcccccc-ccCCCCCCCCeEEEEEEEEccCeEEEEecccccccchhhHHH
Q 012051 99 CNNKGAILVEALTRVKLSELGDLSQYNEFFENLVYKP-VFNGNFSEMPLVVAQVTRFACGGYSIGIGTSHSLFDGPATYD 177 (472)
Q Consensus 99 ~~~~gv~f~~a~~~~~~~~l~~~~~~~~~~~~l~p~~-~~~~~~~~~P~l~vQvt~f~~GG~iL~~~~~H~v~Dg~g~~~ 177 (472)
...+.+.+.+. ++.....+...+..++-.. ...-+....|++.+.+-...++...|.+.+||.++||.|+..
T Consensus 80 v~~~~~~~~~~-------d~~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~ 152 (493)
T 4hvm_A 80 TRENADALVRS-------DLRGHPDPQARCVELLRADRDRPTDPERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYM 152 (493)
T ss_dssp ECSCCCCEEEE-------ECTTSSSHHHHHHHHHHHHHSSCCCTTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHH
T ss_pred ecCCCCCceEE-------ECCCCCchHHHHHHHHHHHhcCCCCCCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHH
Confidence 33222444332 2322111111121111100 001134457899988876667778999999999999999999
Q ss_pred HHHHHhhhhhhhhcCCCCCCCCCCCCCCCCccccccccccCCCccCCcHHhhhhccCCcc-cccccccccCCCCCCcCCC
Q 012051 178 FLSAWACNSAIKKRKGVTVSDHQPVHERGLMVLDNISHVHNAGTVKSPVAAARAAAIDHL-YQLIKNTMINSQNSEVGGL 256 (472)
Q Consensus 178 fl~~wa~~~~~~r~G~~~~~~~~P~~dr~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 256 (472)
|++.+. ++.. |..+ .. +. ++...-.. +......+ ...+...+... +...+ + + ....
T Consensus 153 l~~~l~---~~Y~-g~~~-~~--~~--~~~~~~~~-----~~~~~~~~-~~~~~~~~W~~~l~~~~----~-l--~~~~- 209 (493)
T 4hvm_A 153 VLGAVW---QAYY-GRFR-PA--QY--RDFAEVAD-----FHPLDRET-VRVARHRWWSRRLPALP----V-R--GGDG- 209 (493)
T ss_dssp HHHHHH---HHHT-TCCC-GG--GS--BCGGGTTT-----CCTTCSHH-HHHHHHHHHHHHGGGSC----C-C--C----
T ss_pred HHHHHH---HHhC-CCCC-Cc--CH--HHHHHHHh-----hhhcccCh-hhHHHHHHHHHhccCCC----C-C--CCCC-
Confidence 999999 7776 7521 11 11 11111000 00000001 00001001100 11111 1 1 0000
Q ss_pred CcccCCCCCeEEEEEEeCHHHHHHHHHHHhcccCCCCccC--HHHHHHHHHHHHHHHHhC-C-------CccceEEEEEe
Q 012051 257 NFSEMGSSNYVLKTFHLSGAIVESLKRKVLGERRGNFSCS--SFELVAAHLWKARTKAFA-L-------KKETMVCLQFA 326 (472)
Q Consensus 257 ~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~S--t~d~l~A~iW~~~~rAr~-~-------~~~~~~~l~~~ 326 (472)
..........+.++.+..++|++.|.+. .+| .+.++.|.+-..+.+-+. . .......+..+
T Consensus 210 ----~~~~~~~~~~~~l~~~~~~~l~~~a~~~-----~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~ 280 (493)
T 4hvm_A 210 ----GPVGPPETSRLRVPGSRWQALTEPGGPL-----GGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTE 280 (493)
T ss_dssp --------CCEEEEEEEEHHHHHHHHCC-----------CHHHHHHHHHHHHHHHC----------------CEEEEEEE
T ss_pred ----CCCCCCeeEEEEcCHHHHHHHHHHHHHc-----CCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEee
Confidence 0111267788999999999999887753 478 999999986666654411 0 24567899999
Q ss_pred ecCCCccCCCCCCCccccceeccccccchhhhhhccHHHHHHHHHHHHHh
Q 012051 327 VDTRNKMVPPLPKGFSGNAYVLASVALTAGELEELSHEAIVEKIKEAKNS 376 (472)
Q Consensus 327 vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~ 376 (472)
+++|..- .+ .+.+|+++......+......+.++.+++..+++.+..
T Consensus 281 ~~gR~~~--~~-~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~ 327 (493)
T 4hvm_A 281 VDLRDHL--QL-GSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLD 327 (493)
T ss_dssp EEHHHHT--TC-CSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHH
T ss_pred ccCCCCc--ch-hcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHH
Confidence 9999652 23 56678776555444433221145677777777776654
No 9
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.32 E-value=0.00011 Score=74.91 Aligned_cols=308 Identities=11% Similarity=-0.026 Sum_probs=161.1
Q ss_pred CcceeCCcccCC-----CC---ccceEEEEecCCCCCCCCchhhHHHHHHHHHHHhhhhccccCceeeeecCCCCeE-EE
Q 012051 27 QKILNLSNLDRQ-----CP---LLMYLVFFYKPTFDCQNLSLDYVFSSLKSGLEETLSIWYPAAGRLMSLNPSDRKL-NI 97 (472)
Q Consensus 27 ~~~~~LS~lD~~-----~~---~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~~~~~~~g~~-~i 97 (472)
...+|||+..++ .+ .|. ..+.|+.... + ..+.|+++|..++..++.|--++ ... +|.+ ++
T Consensus 15 ~~~~pls~~Q~~~~~~~~~~~~~y~-~~~~~~l~g~-----l--d~~~L~~Al~~lv~rh~~LRt~f-~~~--~~~~~q~ 83 (466)
T 2xhg_A 15 AGNVPLTPIQKWFFGKNFTNTGHWN-QSSVLYRPEG-----F--DPKVIQSVMDKIIEHHDALRMVY-QHE--NGNVVQH 83 (466)
T ss_dssp CEECCCCHHHHHHHHTTCTTTTCBE-EEEEEEETTC-----C--CHHHHHHHHHHHHHHSGGGGEEE-ECG--GGCCEEE
T ss_pred CCCCCCCHHHHHHHhCCCCCcCcce-eEEEEEcCCC-----C--CHHHHHHHHHHHHHhChHhheEE-ecC--CCceeee
Confidence 457788876542 22 233 2333444322 2 47999999999999999999999 544 2332 22
Q ss_pred EEcC--CCeEEEEEeecccccccCCCCCChhHHhccccccccCCCCCCCCeEEEEEEEEccCeEEEEecccccccchhhH
Q 012051 98 WCNN--KGAILVEALTRVKLSELGDLSQYNEFFENLVYKPVFNGNFSEMPLVVAQVTRFACGGYSIGIGTSHSLFDGPAT 175 (472)
Q Consensus 98 ~~~~--~gv~f~~a~~~~~~~~l~~~~~~~~~~~~l~p~~~~~~~~~~~P~l~vQvt~f~~GG~iL~~~~~H~v~Dg~g~ 175 (472)
.... ..+.+.+. |+.........+..+.-.....-+....|++.+.+-...++.. |-+.+||.++||.|+
T Consensus 84 v~~~~~~~~~~~~~-------d~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~~~~~-l~l~~HH~i~Dg~S~ 155 (466)
T 2xhg_A 84 NRGLGGQLYDFFSY-------NLTAQPDVQQAIEAETQRLHSSMNLQEGPLVKVALFQTLHGDH-LFLAIHHLVVDGISW 155 (466)
T ss_dssp ECCSSSCCCEEEEE-------ECTTCSCHHHHHHHHHHHHHTTCCTTTCCCEEEEEEEETTEEE-EEEEEEGGGCCHHHH
T ss_pred ccccccccceeEEE-------ecCCcccHHHHHHHHHHHHHhccCCCCCCeEEEEEEEcCCCCE-EEEEeeeeeechhhH
Confidence 2221 22333222 2221111111111110000001134567899988876655444 679999999999999
Q ss_pred HHHHHHHhhhhhhhhcCCCCCCCCCCC--CCCCCccccccccccCCCccCCcHHhhhhccCCcc-cccccccccCCCCCC
Q 012051 176 YDFLSAWACNSAIKKRKGVTVSDHQPV--HERGLMVLDNISHVHNAGTVKSPVAAARAAAIDHL-YQLIKNTMINSQNSE 252 (472)
Q Consensus 176 ~~fl~~wa~~~~~~r~G~~~~~~~~P~--~dr~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 252 (472)
..|++.+.+.+.....|. +..+ +|. .-++...-.. + ....+. ..+...+... +...+. +.++..
T Consensus 156 ~~l~~el~~~Y~~~~~g~-~~~l-~~~~~~y~~~~~~~~-----~--~~~~~~-~~~~~~~W~~~l~~~~~---~~lp~~ 222 (466)
T 2xhg_A 156 RILFEDLATGYAQALAGQ-AISL-PEKTDSFQSWSQWLQ-----E--YANEAD-LLSEIPYWESLESQAKN---VSLPKD 222 (466)
T ss_dssp HHHHHHHHHHHHHHHTTC-CCCC-CCCCSCHHHHHHHHH-----H--HTTSHH-HHTTHHHHHHHHHHCCC---CCCCCS
T ss_pred HHHHHHHHHHHHHHHcCC-CCCC-CCCCCCHHHHHHHHH-----H--HhcCcc-chhhhHHHHHhhccCCc---ccCCcc
Confidence 999999993332221243 2222 121 0011110000 0 000000 0000001000 011010 001110
Q ss_pred cCCCCcccCCCCCeEEEEEEeCHHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHHHHHHhCCCccceEEEEEeecCCCc
Q 012051 253 VGGLNFSEMGSSNYVLKTFHLSGAIVESLKRKVLGERRGNFSCSSFELVAAHLWKARTKAFALKKETMVCLQFAVDTRNK 332 (472)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~St~d~l~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~r 332 (472)
. . .............+.++.+..++|++.+.... .+|.++++.|.+-..+.+-. ......+.+++++|..
T Consensus 223 ~-~--~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~----~~t~~~~llaa~~~~l~~~~---~~~dv~ig~~~~gR~~ 292 (466)
T 2xhg_A 223 Y-E--VTDCKQKSVRNMRIRLHPEETEQLLKHANQAY----QTEINDLLLAALGLAFAEWS---KLAQIVIHLEGHGRED 292 (466)
T ss_dssp S-C--CSSCBGGGEEEEEEECCHHHHHHHHHTGGGTT----TCCHHHHHHHHHHHHHHHHH---CCSEEEEEEEECCCCS
T ss_pred c-c--ccccccccceEEEEEcCHHHHHHHHHHhHHhh----CCCHHHHHHHHHHHHHHHHh---CCCceEEEecCCCCCc
Confidence 0 0 00001123467789999999999998875432 47899999998766666554 3456899999999976
Q ss_pred cCC-CCCCCccccceeccccccchhhhhhccHHHHHHHHHHHHHhCC
Q 012051 333 MVP-PLPKGFSGNAYVLASVALTAGELEELSHEAIVEKIKEAKNSIN 378 (472)
Q Consensus 333 l~p-~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~~~ 378 (472)
..+ +--.+-+|+++......+.... +.++.+++..|++.+..+.
T Consensus 293 ~~~~~~~~~~vG~f~n~lplr~~~~~--~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 293 IIEQANVARTVGWFTSQYPVLLDLKQ--TAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp CSTTCCCTTCCSCCCEEEEEEEECSC--CCSHHHHHHHHHHHHHHSG
T ss_pred cccCCCccccccceeeeccEEEecCC--CCCHHHHHHHHHHHHHhCc
Confidence 421 1124556766544444333221 4578899999999988764
No 10
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.32 E-value=8.6e-05 Score=77.15 Aligned_cols=294 Identities=10% Similarity=0.062 Sum_probs=160.0
Q ss_pred CcceeCCcccCC-------CC----ccceEEEEecCCCCCCCCchhhHHHHHHHHHHHhhhhccccCceeeeecCCCCeE
Q 012051 27 QKILNLSNLDRQ-------CP----LLMYLVFFYKPTFDCQNLSLDYVFSSLKSGLEETLSIWYPAAGRLMSLNPSDRKL 95 (472)
Q Consensus 27 ~~~~~LS~lD~~-------~~----~~~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~~~~~~~g~~ 95 (472)
...+|||+.-+. .+ +++...+-++.. . +.+.|++++..++..+|.|--++ ... +|.+
T Consensus 94 ~~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~-------l--d~~~l~~A~~~lv~rh~~LRt~f-~~~--~~~~ 161 (520)
T 2jgp_A 94 QAYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGK-------L--ERTRVEAAFQRLIARHESLRTSF-AVV--NGEP 161 (520)
T ss_dssp CSSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEEC-------C--CHHHHHHHHHHHHHHCGGGGEEE-EEE--TTEE
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCC-------C--CHHHHHHHHHHHHHHhHhheeEE-Eee--CCEE
Confidence 457889876542 11 334444444432 2 47999999999999999999999 554 3443
Q ss_pred E-EEEcCCCeEEEEEeecccccccCCCCCChhHHhccccccccCCCCCCCCeEEEEEEEEccCeEEEEecccccccchhh
Q 012051 96 N-IWCNNKGAILVEALTRVKLSELGDLSQYNEFFENLVYKPVFNGNFSEMPLVVAQVTRFACGGYSIGIGTSHSLFDGPA 174 (472)
Q Consensus 96 ~-i~~~~~gv~f~~a~~~~~~~~l~~~~~~~~~~~~l~p~~~~~~~~~~~P~l~vQvt~f~~GG~iL~~~~~H~v~Dg~g 174 (472)
. +...+..+.+.+. ++.. ..........- .+ -+....|++.+.+-...++...|-+.+||.++||.|
T Consensus 162 ~q~v~~~~~~~~~~~-------~~~~--~~~~~~~~~~~-~~--fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S 229 (520)
T 2jgp_A 162 VQNIHEDVPFALAYS-------EVTE--EEARELVSSLV-QP--FDLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVS 229 (520)
T ss_dssp EEEECSCCCCCCEEE-------ECCH--HHHHHHHHHTC-CC--CCTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHH
T ss_pred EEEECCCCCCceEEE-------eCCH--HHHHHHHHHhc-CC--CCCCCCcceeEEEEEEcCCcEEEEEEccceeecHhH
Confidence 2 2222222222111 1210 00000111110 01 123457899888876667779999999999999999
Q ss_pred HHHHHHHHhhhhhhhhcCCCCCCCCCCCCCCCCccccccccccCCCccCCcHHhhhhccCCcc-cccccccccCCCCCCc
Q 012051 175 TYDFLSAWACNSAIKKRKGVTVSDHQPVHERGLMVLDNISHVHNAGTVKSPVAAARAAAIDHL-YQLIKNTMINSQNSEV 253 (472)
Q Consensus 175 ~~~fl~~wa~~~~~~r~G~~~~~~~~P~~dr~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 253 (472)
+..|++.+. ++.+ |. +... .|..-++...-.. + ....+. ..+...+... +...+.. ..++..
T Consensus 230 ~~~l~~el~---~~Y~-~~-~l~~-~~~~~~d~~~~~~--~-----~~~~~~-~~~~~~yW~~~l~~~~~~--~~lp~~- 292 (520)
T 2jgp_A 230 SGILLAEWV---QLYQ-GD-VLPE-LRIQYKDFAVWQQ--E-----FSQSAA-FHKQEAYWLQTFADDIPV--LNLPTD- 292 (520)
T ss_dssp HHHHHHHHH---HHHT-TC-CCCC-CSCCHHHHHHHHH--H-----HTTSHH-HHHHHHHHHHHTSSCCCC--CCCCCS-
T ss_pred HHHHHHHHH---HHHc-cC-CCCC-CCCCHHHHHHHHH--H-----hhcChh-hHHHHHHHHHHhCCCCCc--CCCCCC-
Confidence 999999999 7776 63 2111 1110011110000 0 000000 0000001000 0111000 001100
Q ss_pred CCCCcccCCCCCeEEEEEEeCHHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHHHHHHhCCCccceEEEEEeecCCCcc
Q 012051 254 GGLNFSEMGSSNYVLKTFHLSGAIVESLKRKVLGERRGNFSCSSFELVAAHLWKARTKAFALKKETMVCLQFAVDTRNKM 333 (472)
Q Consensus 254 ~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~St~d~l~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~rl 333 (472)
.. .............+.++.+..++|++.|.+. .+|.+.++.|.+-..+.|-- ......+..++++|..-
T Consensus 293 ~~--~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~-----~~T~~~~l~aa~a~~L~~~~---~~~dv~~g~~~~gR~~~ 362 (520)
T 2jgp_A 293 FT--RPSTQSFAGDQCTIGAGKALTEGLHQLAQAT-----GTTLYMVLLAAYNVLLAKYA---GQEDIIVGTPITGRSHA 362 (520)
T ss_dssp SC--CCSSCCCBEEEEEEECCHHHHHHHHHHHHHH-----TCCHHHHHHHHHHHHHHHHH---TCSCEEEEEEECCCCSG
T ss_pred CC--CCCCCCCCccEEEEeCCHHHHHHHHHHHHHc-----CCCHHHHHHHHHHHHHHHhc---CCCCeEEEeccCCCCch
Confidence 00 0001122356778899999999999998754 47999999987666665543 34568999999999752
Q ss_pred CCCCCCCccccceeccccccchhhhhhccHHHHHHHHHHHHHh
Q 012051 334 VPPLPKGFSGNAYVLASVALTAGELEELSHEAIVEKIKEAKNS 376 (472)
Q Consensus 334 ~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~ 376 (472)
.+ .+-.|+++........... +.++.++++.+++.+..
T Consensus 363 --~~-~~~vG~f~n~lplr~~~~~--~~~~~~~l~~v~~~~~~ 400 (520)
T 2jgp_A 363 --DL-EPIVGMFVNTLAMRNKPQR--EKTFSEFLQEVKQNALD 400 (520)
T ss_dssp --GG-TTCCSCCCEEEEEEECCCT--TSBHHHHHHHHHHHHHH
T ss_pred --hh-hccEEeeeeeeeEEecCCC--CCCHHHHHHHHHHHHHH
Confidence 22 4566776655444433221 45677888888777654
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.09 E-value=7.4e-05 Score=86.49 Aligned_cols=272 Identities=8% Similarity=0.014 Sum_probs=150.6
Q ss_pred HHHHHHHHHHHhhhhccccCceeeeecCCCC-eEEEEEcCCCeEEEEEeecccccccCCCCCC--hhHHhccccc---cc
Q 012051 63 VFSSLKSGLEETLSIWYPAAGRLMSLNPSDR-KLNIWCNNKGAILVEALTRVKLSELGDLSQY--NEFFENLVYK---PV 136 (472)
Q Consensus 63 ~~~~L~~sL~~~L~~~p~laGrl~~~~~~~g-~~~i~~~~~gv~f~~a~~~~~~~~l~~~~~~--~~~~~~l~p~---~~ 136 (472)
+++.|++++.+++..++.|--++ .... ++ -.++......+.+.+ .|+.....+ ...+..+.-. .+
T Consensus 48 d~~~l~~A~~~lv~rH~~LRt~f-~~~~-~~~p~Q~v~~~~~~~~~~-------~d~~~~~~~~~~~~~~~~~~~~~~~~ 118 (1304)
T 2vsq_A 48 NIKCLEESMNVIMDRYDVFRTVF-IHEK-VKRPVQVVLKKRQFHIEE-------IDLTHLTGSEQTAKINEYKEQDKIRG 118 (1304)
T ss_dssp CHHHHHHHHHHHHHHCGGGGEEE-ECSS-CSSCEEEEESCCCCCEEE-------EECTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhhhhceEEE-EEcC-CCeEEEEECCCCCCceEE-------EECCCCCchhHHHHHHHHHHHHhcCC
Confidence 47999999999999999999998 5543 23 234433332333322 133221111 0111111100 11
Q ss_pred cCCCCCCCCeEEEEEEEEccCeEEEEecccccccchhhHHHHHHHHhhhhhhhhcCCCCCCCCCCCC-CCCCcccccccc
Q 012051 137 FNGNFSEMPLVVAQVTRFACGGYSIGIGTSHSLFDGPATYDFLSAWACNSAIKKRKGVTVSDHQPVH-ERGLMVLDNISH 215 (472)
Q Consensus 137 ~~~~~~~~P~l~vQvt~f~~GG~iL~~~~~H~v~Dg~g~~~fl~~wa~~~~~~r~G~~~~~~~~P~~-dr~~l~~~~~~~ 215 (472)
+ +....|++++.+-...++...|-+.+||.++||.|+..|++.+.+-|.....|. +..+ +|.. -++...-..
T Consensus 119 f--dl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~-~~~l-~~~~~y~d~~~~~~--- 191 (1304)
T 2vsq_A 119 F--DLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQK-PYSL-PPVKPYKDYIKWLE--- 191 (1304)
T ss_dssp C--CTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTC-CCCC-CCCCCTHHHHHHHH---
T ss_pred C--CCCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCC-CCCC-CCcccHHHHHHHHh---
Confidence 1 345678999988777777899999999999999999999999994332222243 3233 2210 011110000
Q ss_pred ccCCCccCCcHHhhhhccCCcc-cccccccccCCCCCCcCCCCcccCCCCCeEEEEEEeCHHHHHHHHHHHhcccCCCCc
Q 012051 216 VHNAGTVKSPVAAARAAAIDHL-YQLIKNTMINSQNSEVGGLNFSEMGSSNYVLKTFHLSGAIVESLKRKVLGERRGNFS 294 (472)
Q Consensus 216 ~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~ 294 (472)
. ..... ...+... +...+.. ..++..... ...........|.++++..++||+.|.+. .
T Consensus 192 --~-----~~~~~--~~~yW~~~L~~~~~~--~~lp~~~~~----~~~~~~~~~~~~~l~~~~~~~L~~~a~~~-----~ 251 (1304)
T 2vsq_A 192 --K-----QDKQA--SLRYWREYLEGFEGQ--TTFAEQRKK----QKDGYEPKELLFSPSEAETKAFTELAKSQ-----H 251 (1304)
T ss_dssp --T-----SCHHH--HHHHHHHHHTTCCCC--CTTTTTCCC----SSCCCCEEEEEECCCHHHHHHHHHHHHHT-----T
T ss_pred --c-----chhhH--HHHHHHHHhCCCCcc--ccCCCCCCc----cccccCcceEEEecCHHHHHHHHHHHHHc-----C
Confidence 0 00000 1001100 1111100 001110000 01122346678889999999999999864 4
Q ss_pred cCHHHHHHHHHHHHHHHHhCCCccceEEEEEeecCCCccCCCCCCCccccceeccccccchhhhhhccHHHHHHHHHHHH
Q 012051 295 CSSFELVAAHLWKARTKAFALKKETMVCLQFAVDTRNKMVPPLPKGFSGNAYVLASVALTAGELEELSHEAIVEKIKEAK 374 (472)
Q Consensus 295 ~St~d~l~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai 374 (472)
+|.+.+|.|.+-..+.|-- ..+...+..+++.|.+..+.+ ++-+|+.+........... +.++.++...+++..
T Consensus 252 ~T~~~vllaa~a~~L~r~t---g~~dvv~G~pvsgR~~~~~~~-~~~vG~fvntlplr~~~~~--~~s~~~ll~~v~~~~ 325 (1304)
T 2vsq_A 252 TTLSTALQAVWSVLISRYQ---QSGDLAFGTVVSGRPAEIKGV-EHMVGLFINVVPRRVKLSE--GITFNGLLKRLQEQS 325 (1304)
T ss_dssp CCHHHHHHHHHHHHHHHHH---TCSEEEEEEEECCCCTTSTTG-GGCCSSCCEEEEEEEECCT--TCBHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhc---CCCCEEEEEEeCCCCccchhh-hcccccceeEEEEEecCCC--CCcHHHHHHHHHHHH
Confidence 7999999887555555443 345689999999997532223 3555665544433332221 457888888888887
Q ss_pred Hh
Q 012051 375 NS 376 (472)
Q Consensus 375 ~~ 376 (472)
..
T Consensus 326 ~~ 327 (1304)
T 2vsq_A 326 LQ 327 (1304)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.68 E-value=0.0049 Score=63.78 Aligned_cols=109 Identities=15% Similarity=0.080 Sum_probs=74.2
Q ss_pred eEEEEEEeCHHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHHHHHHhC---CCccceEEEEEeecCCCccCCCCCCCcc
Q 012051 266 YVLKTFHLSGAIVESLKRKVLGERRGNFSCSSFELVAAHLWKARTKAFA---LKKETMVCLQFAVDTRNKMVPPLPKGFS 342 (472)
Q Consensus 266 ~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~St~d~l~A~iW~~~~rAr~---~~~~~~~~l~~~vd~R~rl~p~lp~~Y~ 342 (472)
-....+.|+++..++|++.|.+.. +..+|-+.+|.|.+-.++.+... ........+.++||+|+++.++.-.+||
T Consensus 277 ~~~~~~~ls~~~t~~L~~~ck~~~--~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~~~~~~n~~ 354 (519)
T 3fot_A 277 PRCVIHKLSADESIDIVKAVKTRL--GPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLREDIASNFY 354 (519)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHT--CTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBCHHHHTSCC
T ss_pred cceEEEEcCHHHHHHHHHHHHhcC--CCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCCCccccccc
Confidence 346788999999999999999763 34689999998887777766422 1123468899999999999765445788
Q ss_pred ccceeccccccc----------hhhhhhc-cHHHHHHHHHHHHHh
Q 012051 343 GNAYVLASVALT----------AGELEEL-SHEAIVEKIKEAKNS 376 (472)
Q Consensus 343 GN~~~~~~~~~~----------~~~l~~~-~L~~~A~~Ir~ai~~ 376 (472)
|.+........+ .+++... .+.++++.+++....
T Consensus 355 ~~~~~~~~~~v~~i~~~~~~~~~~e~~~~~~~~~~ar~l~~~y~~ 399 (519)
T 3fot_A 355 AMCQTAAVVRIENLKSITVSHKDEKELQVRALESACRNIKKSYRQ 399 (519)
T ss_dssp SCCEEEEEEEECCGGGGCCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeeeeeEecCccccccccchhhhhhHhHHHHHHHHHHHHhhc
Confidence 887765443321 1122211 156777777776554
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=68.35 E-value=3.2 Score=37.22 Aligned_cols=44 Identities=11% Similarity=0.245 Sum_probs=32.7
Q ss_pred CCeEEEEEEEEccCe--EEEEecccccccchhhHHHHHHHHhhhhhhhh
Q 012051 144 MPLVVAQVTRFACGG--YSIGIGTSHSLFDGPATYDFLSAWACNSAIKK 190 (472)
Q Consensus 144 ~P~l~vQvt~f~~GG--~iL~~~~~H~v~Dg~g~~~fl~~wa~~~~~~r 190 (472)
.|++.+--..=.+|. +-|++++||.+.||.-+..|++.+. +.+.
T Consensus 164 ~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk---~~le 209 (213)
T 3cla_A 164 APIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQ---ELCN 209 (213)
T ss_dssp SCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHH---HHHT
T ss_pred ccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHH---HHHH
Confidence 588765322112333 6889999999999999999999999 6653
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=66.92 E-value=3.6 Score=37.03 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=30.1
Q ss_pred CCCeEEEEEEEEccCe--EEEEecccccccchhhHHHHHHHHh
Q 012051 143 EMPLVVAQVTRFACGG--YSIGIGTSHSLFDGPATYDFLSAWA 183 (472)
Q Consensus 143 ~~P~l~vQvt~f~~GG--~iL~~~~~H~v~Dg~g~~~fl~~wa 183 (472)
..|++.+=-..-.+|. +-|++++||.+.||.-+..|++.+.
T Consensus 171 ~~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk 213 (217)
T 2i9d_A 171 NYPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVE 213 (217)
T ss_dssp SSCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHH
T ss_pred eEEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHH
Confidence 3587764211111333 6789999999999999999999998
No 15
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=66.74 E-value=4.5 Score=37.05 Aligned_cols=29 Identities=10% Similarity=0.247 Sum_probs=26.5
Q ss_pred EEEEecccccccchhhHHHHHHHHhhhhhhhh
Q 012051 159 YSIGIGTSHSLFDGPATYDFLSAWACNSAIKK 190 (472)
Q Consensus 159 ~iL~~~~~H~v~Dg~g~~~fl~~wa~~~~~~r 190 (472)
+-|+++++|.+.||.-+..|++.+. +.+.
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk---~~le 236 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLG---DLLA 236 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHH---HHHH
T ss_pred EEEEEEECcccccHHHHHHHHHHHH---HHHh
Confidence 6799999999999999999999999 7664
No 16
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=66.26 E-value=3.7 Score=36.96 Aligned_cols=44 Identities=14% Similarity=0.120 Sum_probs=32.8
Q ss_pred CCeEEEEEEEEccCe--EEEEecccccccchhhHHHHHHHHhhhhhhhh
Q 012051 144 MPLVVAQVTRFACGG--YSIGIGTSHSLFDGPATYDFLSAWACNSAIKK 190 (472)
Q Consensus 144 ~P~l~vQvt~f~~GG--~iL~~~~~H~v~Dg~g~~~fl~~wa~~~~~~r 190 (472)
.|++.+--..-.+|. +-|++++||.+.||.-+..|++.+. +.+.
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk---~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQ---QYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHH---HHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHH---HHHh
Confidence 577765322222333 7889999999999999999999999 6554
No 17
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=65.37 E-value=4.6 Score=36.88 Aligned_cols=29 Identities=17% Similarity=0.391 Sum_probs=26.7
Q ss_pred EEEEecccccccchhhHHHHHHHHhhhhhhhh
Q 012051 159 YSIGIGTSHSLFDGPATYDFLSAWACNSAIKK 190 (472)
Q Consensus 159 ~iL~~~~~H~v~Dg~g~~~fl~~wa~~~~~~r 190 (472)
+-|+++++|.+.||.-+..|++.+. +.+.
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk---~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFR---KYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHH---HHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHH---HHHh
Confidence 7899999999999999999999999 6664
No 18
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=62.65 E-value=4 Score=36.85 Aligned_cols=29 Identities=17% Similarity=0.397 Sum_probs=26.4
Q ss_pred EEEEecccccccchhhHHHHHHHHhhhhhhhh
Q 012051 159 YSIGIGTSHSLFDGPATYDFLSAWACNSAIKK 190 (472)
Q Consensus 159 ~iL~~~~~H~v~Dg~g~~~fl~~wa~~~~~~r 190 (472)
+-|+++++|.+.||.-+..|++.+. +...
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~---~~le 215 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLK---KVIE 215 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHH---HHHT
T ss_pred EEEEEEeccceecHHHHHHHHHHHH---HHHh
Confidence 5589999999999999999999999 7775
No 19
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=61.67 E-value=5 Score=36.45 Aligned_cols=29 Identities=21% Similarity=0.403 Sum_probs=26.4
Q ss_pred EEEEecccccccchhhHHHHHHHHhhhhhhhh
Q 012051 159 YSIGIGTSHSLFDGPATYDFLSAWACNSAIKK 190 (472)
Q Consensus 159 ~iL~~~~~H~v~Dg~g~~~fl~~wa~~~~~~r 190 (472)
+-|+++++|.+.||.-+..|++.+. +.+.
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk---~~le 224 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIK---ELLE 224 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHH---HHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHH---HHHh
Confidence 5699999999999999999999999 7765
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=59.77 E-value=5.6 Score=36.84 Aligned_cols=29 Identities=17% Similarity=0.477 Sum_probs=26.3
Q ss_pred EEEEecccccccchhhHHHHHHHHhhhhhhhh
Q 012051 159 YSIGIGTSHSLFDGPATYDFLSAWACNSAIKK 190 (472)
Q Consensus 159 ~iL~~~~~H~v~Dg~g~~~fl~~wa~~~~~~r 190 (472)
+-|+++++|.+.||.-+..|++.+. +.+.
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk---~~Le 252 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWK---SYLE 252 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHH---HHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHH---HHHh
Confidence 5699999999999999999999999 7664
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=54.14 E-value=8 Score=35.66 Aligned_cols=29 Identities=24% Similarity=0.343 Sum_probs=26.5
Q ss_pred EEEEecccccccchhhHHHHHHHHhhhhhhhh
Q 012051 159 YSIGIGTSHSLFDGPATYDFLSAWACNSAIKK 190 (472)
Q Consensus 159 ~iL~~~~~H~v~Dg~g~~~fl~~wa~~~~~~r 190 (472)
+-|+++++|.+.||.-+..|++.+. +.+.
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk---~~Le 238 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIK---ANVE 238 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHH---HHHH
T ss_pred EEEEEEEccccccHHHHHHHHHHHH---HHHh
Confidence 4599999999999999999999999 7775
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=52.64 E-value=8.8 Score=35.25 Aligned_cols=29 Identities=14% Similarity=0.288 Sum_probs=26.5
Q ss_pred EEEEecccccccchhhHHHHHHHHhhhhhhhh
Q 012051 159 YSIGIGTSHSLFDGPATYDFLSAWACNSAIKK 190 (472)
Q Consensus 159 ~iL~~~~~H~v~Dg~g~~~fl~~wa~~~~~~r 190 (472)
+-|+++++|.+.||.-+..|++.+. +.+.
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk---~~Le 233 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELR---DLIE 233 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHH---HHHH
T ss_pred eEEEEEecccccCHHHHHHHHHHHH---HHHh
Confidence 4689999999999999999999999 7765
No 23
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=50.31 E-value=11 Score=20.42 Aligned_cols=19 Identities=26% Similarity=0.510 Sum_probs=16.0
Q ss_pred CccCHHHHHHHHHHHHHHH
Q 012051 293 FSCSSFELVAAHLWKARTK 311 (472)
Q Consensus 293 ~~~St~d~l~A~iW~~~~r 311 (472)
+-+++.|-|+-++|+++..
T Consensus 6 svftsqdylsdhlwralna 24 (26)
T 2xl1_A 6 SVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred ceeecHHHHHHHHHHHHhc
Confidence 4578999999999998753
No 24
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=39.91 E-value=39 Score=26.61 Aligned_cols=37 Identities=22% Similarity=0.227 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHhhhhccccCceeeeecCCCCeEEEEEc
Q 012051 63 VFSSLKSGLEETLSIWYPAAGRLMSLNPSDRKLNIWCN 100 (472)
Q Consensus 63 ~~~~L~~sL~~~L~~~p~laGrl~~~~~~~g~~~i~~~ 100 (472)
+++.|+++|...+.+-..|||.+ ...-..++++|..+
T Consensus 93 dlea~ekalkemirqarkfagtv-tytl~gn~l~i~it 129 (170)
T 4hhu_A 93 DLEALEKALKEMIRQARKFAGTV-TYTLSGNRLVIVIT 129 (170)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEE-EEEECSSEEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceE-EEEEeCCEEEEEEe
Confidence 36888899999999999999999 66542567777765
No 25
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=36.72 E-value=39 Score=26.61 Aligned_cols=37 Identities=22% Similarity=0.227 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhhhhccccCceeeeecCCCCeEEEEEc
Q 012051 63 VFSSLKSGLEETLSIWYPAAGRLMSLNPSDRKLNIWCN 100 (472)
Q Consensus 63 ~~~~L~~sL~~~L~~~p~laGrl~~~~~~~g~~~i~~~ 100 (472)
+++.|+++|...+.+-..|||.+ ...-..++++|..+
T Consensus 12 dlea~ekalkemirqarkfagtv-tytl~gn~l~i~it 48 (170)
T 4hhu_A 12 DLEALEKALKEMIRQARKFAGTV-TYTLSGNRLVIVIT 48 (170)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEE-EEEEETTEEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceE-EEEEeCCEEEEEEe
Confidence 36888899999999999999999 55532467777765
No 26
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=34.78 E-value=8.2 Score=38.50 Aligned_cols=29 Identities=14% Similarity=0.310 Sum_probs=0.0
Q ss_pred EEEEecccccccchhhHHHHHHHHhhhhhhhh
Q 012051 159 YSIGIGTSHSLFDGPATYDFLSAWACNSAIKK 190 (472)
Q Consensus 159 ~iL~~~~~H~v~Dg~g~~~fl~~wa~~~~~~r 190 (472)
+-|+++++|.+.||.-...|++.+. +.+.
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk---~~Le 419 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIK---RLLS 419 (428)
T ss_dssp --------------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHH---HHHh
Confidence 3599999999999999999999999 6664
No 27
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=32.73 E-value=45 Score=23.19 Aligned_cols=37 Identities=16% Similarity=0.211 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHhhhhccccCceeeeecCCCCeEEEEEc
Q 012051 63 VFSSLKSGLEETLSIWYPAAGRLMSLNPSDRKLNIWCN 100 (472)
Q Consensus 63 ~~~~L~~sL~~~L~~~p~laGrl~~~~~~~g~~~i~~~ 100 (472)
+++..+++|...+.+-..+||.+ ...-..+.++|+.+
T Consensus 11 dleafekalkemirqarkfagtv-tytldgndleirit 47 (85)
T 2kl8_A 11 DLEAFEKALKEMIRQARKFAGTV-TYTLDGNDLEIRIT 47 (85)
T ss_dssp SHHHHHHHHHHHHHHHTTTTCEE-EEEECSSCEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceE-EEEecCCeeEEEEe
Confidence 46788888998999999999999 55541345777765
No 28
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=28.26 E-value=1.1e+02 Score=20.00 Aligned_cols=23 Identities=13% Similarity=0.093 Sum_probs=20.1
Q ss_pred EEEEEEeCHHHHHHHHHHHhccc
Q 012051 267 VLKTFHLSGAIVESLKRKVLGER 289 (472)
Q Consensus 267 ~~~~f~f~~~~l~~Lk~~~~~~~ 289 (472)
....|+|++++.+.|++.+.++.
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE~ 24 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEEE 24 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHTT
T ss_pred ceEEEEecHHHHHHHHHHHHHHH
Confidence 35689999999999999998765
No 29
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=27.92 E-value=1.2e+02 Score=20.53 Aligned_cols=42 Identities=21% Similarity=0.112 Sum_probs=30.8
Q ss_pred CCeEEEEEEeCHHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHHHHHHhC
Q 012051 264 SNYVLKTFHLSGAIVESLKRKVLGERRGNFSCSSFELVAAHLWKARTKAFA 314 (472)
Q Consensus 264 ~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~St~d~l~A~iW~~~~rAr~ 314 (472)
.+.-...|+|+.++.+.|.+.+.++.. .+..+|=|.+.++-.
T Consensus 13 k~~~~Vs~Y~SkEey~~L~klA~eE~e---------SV~sfIKR~IlK~l~ 54 (66)
T 2k1o_A 13 KRNFSVTFYLSKEEHDVLRRLADEEVE---------SVNSFVKRHILKTII 54 (66)
T ss_dssp CCCEEEEEEEEHHHHHHHHHHHHTTCS---------CHHHHHHHHHHHHHC
T ss_pred ccceEEEEEecHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHH
Confidence 456688999999999999999987652 234456666666643
Done!