Your job contains 1 sequence.
>012054
MGAEVIEVWGTWEELLLGGAVLRHGTRDWNLVAAELRARTVCPYTVTPEMCKAHYEDLQQ
RFYGCKAWFEELRKQRMAELKRALELSENSIGSLESKLETLKAERGDDCQVDNDCSQTES
PVPCQKSDAVVCSSKETSKDGLSAGSFTRETRTHWSPVSQIPAAVAAEEMETKTQGLLSS
EQEKVSSSEKITAIVCGGQVGSLKKRRGKRKRKDCSRDVKEGSVGESDFLGVPDAKPVYR
RKENSTPVSGQFARSSGADDQSGSLRKDSIDDIKGVFESVAQNESAFVFRHRLDSQKRGR
YKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYSKNTREHKSAFLLRTI
VLKTMRQYFKDNEYGNKPTTSFLSPSSPLHKPPVKPRTARPGRSKLSLKAANAGNPADKP
LSRAKKPSNVDSPSSMESLTLTKKSLSRKVGRTNASQRAESATRGRKRSRAS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012054
(472 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1006230673 - symbol:BRD4 "AT1G61215" species:3... 814 4.1e-81 1
TAIR|locus:2101477 - symbol:AT3G60110 species:3702 "Arabi... 145 6.7e-21 3
TAIR|locus:2060040 - symbol:AT2G42150 species:3702 "Arabi... 193 1.0e-19 2
TAIR|locus:2050574 - symbol:AT2G44430 species:3702 "Arabi... 229 4.6e-16 1
TAIR|locus:2095878 - symbol:AT3G57980 species:3702 "Arabi... 106 6.7e-16 4
FB|FBgn0039654 - symbol:Brd8 "Brd8" species:7227 "Drosoph... 121 1.2e-05 3
>TAIR|locus:1006230673 [details] [associations]
symbol:BRD4 "AT1G61215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001487 Pfam:PF00439 PROSITE:PS50014
SMART:SM00297 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:BT015126 EMBL:BT015908
IPI:IPI00533894 RefSeq:NP_974063.1 UniGene:At.49477
ProteinModelPortal:Q6AWX2 SMR:Q6AWX2 STRING:Q6AWX2 PRIDE:Q6AWX2
EnsemblPlants:AT1G61215.1 GeneID:2745841 KEGG:ath:AT1G61215
TAIR:At1g61215 InParanoid:Q6AWX2 OMA:ESNDECH PhylomeDB:Q6AWX2
ProtClustDB:CLSN2681296 Genevestigator:Q6AWX2 Uniprot:Q6AWX2
Length = 475
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 216/485 (44%), Positives = 279/485 (57%)
Query: 9 WGTWEELLLGGAVLRHGTRDWNLVAAELRARTVCPYTVTPEMCKAHYEDLQQRFYGCKAW 68
WGTWEELLLGGAVLRHGT DW +VA ELR+ ++ P TPE+CKA Y+DL++R+ GCKAW
Sbjct: 14 WGTWEELLLGGAVLRHGTGDWTVVADELRSHSL-PEIFTPEICKAKYKDLRKRYVGCKAW 72
Query: 69 FEELRKQRMAELKRALELSENSIGSLESKLETLKAERGDDCQVDN-DCSQTESPVPCQKS 127
FEEL+K+R+AELK AL SE+SIGSLESKL++LK+E D+C +N D S+T S P KS
Sbjct: 73 FEELKKKRVAELKAALLKSEDSIGSLESKLQSLKSESNDECHQNNYDSSRTLSLEPSPKS 132
Query: 128 DAV-VCSSKETSKDGLSAGSFTRE--TRTHWSPVSQIPAAVAAEEMETKTQGLLXXXXXX 184
+ C+SK+TSKD S GSFT++ T T+WSP ++ A V E+ KT+ LL
Sbjct: 133 EGGGECTSKDTSKDLSSVGSFTQQELTTTNWSPEAKSEAPVVIEQ--EKTKDLLHNDIFE 190
Query: 185 XXXXXXITAIVCGGQV-GSLXXXXXXXXXXDCS----RDVKEGS-VGESDFLGVP-DAKP 237
GGQV S+ DCS ++V E S V ESD D
Sbjct: 191 SVYGG-------GGQVLPSMRKKRGKRKRKDCSVSVGKEVMEVSAVEESDLFDTSADIAS 243
Query: 238 VYRRKENSTPVSGQFARSSGADDQSGSLRKDSIDDIKGVFESVAQNESAFVFRHRLDSQK 297
+YR KE ++ S Q S G S +L K+ + ++ ++AQNE A VFR RLDSQK
Sbjct: 244 IYRSKEAASTSSSQ---SRG---HSLALPKE----LMKIYNTIAQNECALVFRRRLDSQK 293
Query: 298 RGRYKKMILRHMDVDTXXXXXXXXXXXXXKELFRDLLLLANNAVVFYSKNTREHKSAFLL 357
RGRYKK++ RHMD+DT KELFRD LL+ANNA +FYSKNTRE+KSA L
Sbjct: 294 RGRYKKLVRRHMDLDTVQSRINGCSISSAKELFRDFLLVANNAAIFYSKNTREYKSAVGL 353
Query: 358 RTIVLKTMRQYF-KDNEYGNKXXXXXXXXXXXXHKPPVKPRTARPGRSKLSLKAANAG-N 415
R IV K++R Y +D+ H+ P R+ L+ K G +
Sbjct: 354 RDIVTKSLRHYLTEDHPPHRSSITAGSTKVVVLHQKSTSPSV----RTSLAAKKPRTGAH 409
Query: 416 PAD-------KPLSRAKKPSNVDSP-SSMESLTLTKKSLS-RKVGRTNASQRAES-ATRG 465
P K SR K S D P S+++S KK + RK GR A++ ES A G
Sbjct: 410 PLKTVVQDMAKTSSRGNKRSVTDLPVSAVKSSAAGKKGTAVRKDGR-QANRGLESPALMG 468
Query: 466 RKRSR 470
RKR+R
Sbjct: 469 RKRNR 473
>TAIR|locus:2101477 [details] [associations]
symbol:AT3G60110 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR001005 InterPro:IPR001487
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00439 PROSITE:PS50014
SMART:SM00297 SMART:SM00717 EMBL:CP002686 GO:GO:0003677
GO:GO:0003682 SUPFAM:SSF46689 Gene3D:1.20.920.10 SUPFAM:SSF47370
ProtClustDB:CLSN2718100 EMBL:AY056393 EMBL:BT000519 IPI:IPI00538592
RefSeq:NP_567092.4 UniGene:At.26330 ProteinModelPortal:Q93ZQ2
SMR:Q93ZQ2 PRIDE:Q93ZQ2 EnsemblPlants:AT3G60110.1 GeneID:825181
KEGG:ath:AT3G60110 TAIR:At3g60110 OMA:RRTSKEI PhylomeDB:Q93ZQ2
Genevestigator:Q93ZQ2 Uniprot:Q93ZQ2
Length = 641
Score = 145 (56.1 bits), Expect = 6.7e-21, Sum P(3) = 6.7e-21
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 4 EVIEVWGTWEELLLGGAVLRHGTRDWNLVAAELRARTVCPYTVTPEMCKAHYEDLQQRF 62
++ +VWGTWEEL+L AV RH DW+ VA E++AR+ V+ C+ Y+DL++RF
Sbjct: 47 QIKQVWGTWEELVLTCAVKRHAFSDWDSVAKEVQARSRSSLIVSAVNCRLKYQDLKRRF 105
Score = 128 (50.1 bits), Expect = 6.7e-21, Sum P(3) = 6.7e-21
Identities = 52/223 (23%), Positives = 89/223 (39%)
Query: 250 GQFARSSGADDQSGSLRK--DSIDDIKGVFESVAQNESAFVFRHRLDSQKRGRYKKMILR 307
GQ RS G G ++ D + + + + + VF RL SQ YK++I +
Sbjct: 281 GQKYRSGGG---GGGVKSAGDKSQPLIDIIKLIRSHPRGSVFESRLRSQDTKDYKRLIRQ 337
Query: 308 HMDVDTXXXXXXXXXXXXXK-ELFRDLLLLANNAVVFYSKNTREHKSAFLLRTIVLKTMR 366
H+D+ T +RDL LL NA+VF+ ++ E +A LRT+V M+
Sbjct: 338 HLDMKTIEKKMEKGSYVSSSLSFYRDLKLLFTNAIVFFPTSSSESIAAQELRTLVSNEMK 397
Query: 367 QYFKDNEYGNKXXXXXXXXXXXXHKPPVKPRTARPGRSKLSLKAANAGNPADKPLSRAKK 426
+ + + G+ K V P + K S A +P+ + +K
Sbjct: 398 K--RTGKLGHCVIKSEAESSVSRQKSSVLSLV--PCKKKSS--ALKKTSPSSSSRQKDEK 451
Query: 427 PSNVDSPSSMESLTLTKKSLSRKVGRTNASQRAESATRGRKRS 469
S S + + T T + S + + A+ GR ++
Sbjct: 452 KSQEVSEEKIVTTTATTSARSSRRTSKEIAVVAKDTKTGRAKN 494
Score = 94 (38.1 bits), Expect = 6.7e-21, Sum P(3) = 6.7e-21
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 67 AWFEELRKQRMAELKRALELSENSIGSLESKLETLKAER-GDDCQVDNDCSQTES-PV 122
+W E+LR MAEL+R ++ ++SI SL+ K++ L+ E+ GDD D E+ PV
Sbjct: 130 SWLEQLRSLHMAELRREVQRCDDSILSLQLKVKKLEEEKDGDDGDNKPDLKNDETKPV 187
Score = 46 (21.3 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 21/89 (23%), Positives = 33/89 (37%)
Query: 55 YEDLQQRFYGCKAWFEELRKQRMAELKRALELSENSIGSLESKLETLKAERGDDCQVDND 114
Y DL+ F +F + +A + L N + KL + + V
Sbjct: 361 YRDLKLLFTNAIVFFPTSSSESIAA-QELRTLVSNEMKKRTGKLGHCVIKSEAESSVSRQ 419
Query: 115 CSQTESPVPCQKSDAVVCSSKETSKDGLS 143
S S VPC+K + + K+TS S
Sbjct: 420 KSSVLSLVPCKKKSSAL---KKTSPSSSS 445
Score = 40 (19.1 bits), Expect = 6.6e-12, Sum P(3) = 6.6e-12
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 242 KENSTPVSGQFARSSGADDQ 261
KE + +G+ R SG DD+
Sbjct: 614 KETAEVATGKRGRESGKDDK 633
Score = 39 (18.8 bits), Expect = 8.3e-12, Sum P(3) = 8.3e-12
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 412 NAGNPADKPLSRAKKPSNVDSPSSMES 438
N+ NP P+++A+ P + S S
Sbjct: 233 NSRNPDPDPVNKAETPEEEERTVSKRS 259
Score = 39 (18.8 bits), Expect = 8.3e-12, Sum P(3) = 8.3e-12
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 394 VKPRTARPGRSKLSLKAANAGNPADKPLSRAKKPSNV 430
VKPR R K ++ N + + + K+ + V
Sbjct: 583 VKPRELRSSTGKKKVEVENNNSKSSSKRKQTKETAEV 619
Score = 38 (18.4 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 12/56 (21%), Positives = 21/56 (37%)
Query: 93 SLESKLETLKAERGDDCQVDNDCSQTESPVPCQKSDAVVCSSKETSKDGLSAGSFT 148
+++ + +T DD + S+TE K +V K K+ G T
Sbjct: 495 NIKKQTDTKTESSDDDDDEKEENSKTEKKTVADKKKSVADFLKRIKKNSPQKGKET 550
>TAIR|locus:2060040 [details] [associations]
symbol:AT2G42150 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] InterPro:IPR001005 InterPro:IPR001487
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00439 PROSITE:PS50014
SMART:SM00297 SMART:SM00717 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 EMBL:AC002561
Gene3D:1.20.920.10 SUPFAM:SSF47370 UniGene:At.42743
UniGene:At.42745 IPI:IPI00537143 PIR:T00925 RefSeq:NP_181745.1
ProteinModelPortal:O48523 SMR:O48523 PaxDb:O48523 PRIDE:O48523
EnsemblPlants:AT2G42150.1 GeneID:818815 KEGG:ath:AT2G42150
TAIR:At2g42150 eggNOG:NOG244537 HOGENOM:HOG000242892
InParanoid:O48523 OMA:LMNETIS PhylomeDB:O48523
ProtClustDB:CLSN2718100 ArrayExpress:O48523 Genevestigator:O48523
Uniprot:O48523
Length = 631
Score = 193 (73.0 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 45/111 (40%), Positives = 63/111 (56%)
Query: 7 EVWGTWEELLLGGAVLRHGTRDWNLVAAELRARTVCPYTVTPEMCKAHYEDLQQRF---- 62
+ W TWEELLL AV RHGT WN V+AE++ + ++T C+ Y DL+ RF
Sbjct: 14 QTWSTWEELLLACAVHRHGTESWNSVSAEIQKLSPNLCSLTASACRHKYFDLKSRFTQEL 73
Query: 63 --------YGCKAWFEELRKQRMAELKRALELSENSIGSLESKLETLKAER 105
W EELRK R+ EL+R +E + SI +L+SK++ L+ ER
Sbjct: 74 PVPESVAEISTAPWLEELRKLRVDELRREVEQYDLSISTLQSKVKQLEEER 124
Score = 117 (46.2 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 55/221 (24%), Positives = 88/221 (39%)
Query: 259 DDQSGSLRKD-SIDD--IKGVFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTXX 315
+DQS + KD +++ + E + + F RL+ Q+ Y +I H+D +
Sbjct: 259 EDQSPTSAKDFTVESQPLISFVEILLSHPCGSHFSRRLERQETIEYGTIIREHVDFEIIR 318
Query: 316 XXXXXXXXXXXK-ELFRDLLLLANNAVVFYSKNTREHKSAFLLRTIVLKTMRQYFKDNEY 374
+ FRDLLLL NNA VFY + + E K A L +V K M K
Sbjct: 319 KRVEGGLYKSWRINFFRDLLLLVNNARVFYHRGSSEFKFAEQLHQLVKKQMTTTLKGLSN 378
Query: 375 GNKXXXXXXXXXXXXHKPPVKPRTARPGRSKLSLKAANAGNP-ADKPLSRAKKPSNVDSP 433
++ P KP +++P S ++ A + A KPL + +
Sbjct: 379 RDEISISPPKEEVVAI-PSSKPVSSKPRMSVPNIVACRKRSALAAKPLLLLPPGPDKKAK 437
Query: 434 SSMESLTLTKKSLSRKVGRTNASQRAESA-----TRGRKRS 469
+ + +K +S K G + +S TRGR S
Sbjct: 438 KTDHVVDYDEKPVSDKDGEASGKDDDDSLIVKIMTRGRTSS 478
Score = 40 (19.1 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 216 SRDVKEGSVGESDFLGVPDAKPVYRRKENSTP 247
+RD S + + + +P +KPV + S P
Sbjct: 378 NRDEISISPPKEEVVAIPSSKPVSSKPRMSVP 409
>TAIR|locus:2050574 [details] [associations]
symbol:AT2G44430 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR001005 InterPro:IPR001487
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00439 PROSITE:PS50014
SMART:SM00297 SMART:SM00717 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR017877
PROSITE:PS50090 EMBL:AC004521 HOGENOM:HOG000242892
ProtClustDB:CLSN2718100 EMBL:AY120707 EMBL:BT009664 IPI:IPI00538687
PIR:T02398 RefSeq:NP_181971.1 UniGene:At.43353
ProteinModelPortal:O64877 SMR:O64877 PRIDE:O64877
EnsemblPlants:AT2G44430.1 GeneID:819050 KEGG:ath:AT2G44430
TAIR:At2g44430 eggNOG:NOG318143 InParanoid:O64877 OMA:PIIVCRK
PhylomeDB:O64877 ArrayExpress:O64877 Genevestigator:O64877
Uniprot:O64877
Length = 646
Score = 229 (85.7 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 91/374 (24%), Positives = 153/374 (40%)
Query: 7 EVWGTWEELLLGGAVLRHGTRDWNLVAAELRARTVCPYTV-TPEMCKAHYEDLQQRFYGC 65
+ WGTWEELLL AV RHG DW+ VA E+R+R+ + + + C+ Y DL++RF+
Sbjct: 48 QAWGTWEELLLACAVKRHGFGDWDSVATEVRSRSSLSHLLASANDCRHKYRDLKRRFH-- 105
Query: 66 KAWFEELRKQRMAELKRALELSENSIGSLESKLETLKAERGDDC--QVDN-DCSQTESPV 122
E K + E E +G+ LE L+ R + +V+ DCS +
Sbjct: 106 -----EQEKTDVTATVEEEEEEEERVGNNIPWLEQLRNLRVAELRREVERYDCSILSLQL 160
Query: 123 PCQKSDAVVCSSKETSKDGLSAGSFTRETRTH--WSPVSQIPAAV-AAEEMETKTQGLLX 179
+K + +E ++ + +E R+ S AV AAEE + + + +
Sbjct: 161 KVKKLE----EEREVGEEKPDLENERKEERSENDGSESEHREKAVSAAEESDRENRSMNE 216
Query: 180 XXXXXXXXXXXITAIVCGGQVGSLXXXXXXXXXXDCSRDV-KEGSVGESDFLGVPDAKPV 238
VCG + V K+ + E + V
Sbjct: 217 SNSTATAGEEER---VCGDEPSQTREDDSGNDKNPDPDPVNKDATAAEEEEGSVSRGSEA 273
Query: 239 YRRKE--NSTPVSGQFARSSGADDQSGSLR--KDSIDDIKGVFESVAQNESAFVFRHRLD 294
E S ++ R +G +R + + + + + + +F RL
Sbjct: 274 SHSDELGESGTSESKWKRKRRKQGGAGEIRSAESKSQPLISLLDLIRSHPRGSLFERRLR 333
Query: 295 SQKRGRYKKMILRHMDVDTXXXXXXXXXXXXXKELF-RDLLLLANNAVVFYSKNTREHKS 353
SQ+ YK M+ +H+D++T +F RDL LL NA+VF+ ++ E +
Sbjct: 334 SQEAKDYKSMVKQHLDIETIQRKLKQGSYDSSSLIFYRDLQLLFTNAIVFFPLSSSESMA 393
Query: 354 AFLLRTIVLKTMRQ 367
A LR +V + MR+
Sbjct: 394 AHELRAVVSQEMRK 407
>TAIR|locus:2095878 [details] [associations]
symbol:AT3G57980 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR001005 InterPro:IPR001487 Pfam:PF00249
Pfam:PF00439 PROSITE:PS50014 SMART:SM00297 SMART:SM00717
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003682
InterPro:IPR017930 PROSITE:PS51294 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AL132977 HOGENOM:HOG000242892
ProtClustDB:CLSN2718100 IPI:IPI00525752 PIR:T46020
RefSeq:NP_191357.1 UniGene:At.28706 ProteinModelPortal:Q9M2Q0
SMR:Q9M2Q0 PRIDE:Q9M2Q0 EnsemblPlants:AT3G57980.1 GeneID:824967
KEGG:ath:AT3G57980 TAIR:At3g57980 InParanoid:Q9M2Q0 OMA:ESMDESK
PhylomeDB:Q9M2Q0 Genevestigator:Q9M2Q0 Uniprot:Q9M2Q0
Length = 632
Score = 106 (42.4 bits), Expect = 6.7e-16, Sum P(4) = 6.7e-16
Identities = 30/109 (27%), Positives = 52/109 (47%)
Query: 260 DQSGSLRKDSIDD--IKGVFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTXXXX 317
DQS ++ K ++ + E + + F RL++Q+ Y ++I +H+D +
Sbjct: 263 DQSLTVNKIFVESQPLSDFIEILQSHPIGSHFSRRLETQETSDYYRIIRQHIDFEMIRSR 322
Query: 318 XXXXXXXXXK-ELFRDLLLLANNAVVFYSKNTREHKSAFLLRTIVLKTM 365
+ + FRDLLLL NN VFY + + E +A L ++ K M
Sbjct: 323 VEEGYYKTARTKFFRDLLLLINNVRVFYGEPSPEFNAAKQLYQLIKKQM 371
Score = 104 (41.7 bits), Expect = 6.7e-16, Sum P(4) = 6.7e-16
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 13 EELLLGGAVLRHGTRDWNLVAAELRARTVCPYTVTPEMCKAHYEDLQQRF 62
EELLL AV RHGT W+ VA+E+ + T+T C+ Y DL++RF
Sbjct: 2 EELLLACAVHRHGTDSWDSVASEVHKQNSTFRTLTAIDCRHKYNDLKRRF 51
Score = 100 (40.3 bits), Expect = 6.7e-16, Sum P(4) = 6.7e-16
Identities = 34/116 (29%), Positives = 56/116 (48%)
Query: 68 WFEELRKQRMAELKRALELSENSIGSLESKLETLKAERGDDCQVDND----CSQT-ESPV 122
W EELRK R+ EL+R +E + SI SL+ K++TL+ ER + +N ++T E+
Sbjct: 75 WLEELRKLRVDELRREVERYDLSISSLQLKVKTLEDEREKSLKTENSDLDRIAETKENHT 134
Query: 123 PCQKSDAVVCSSKETSKD--GLSAGSFTRETRTHWS---PVSQIPAAVAAEEMETK 173
+ V + + S D S G+ + T PV + P + E+ + K
Sbjct: 135 ESGNNSGVPVTELKNSPDPNDNSPGTGSENTNRAVKIAEPVDEEPNRIGGEDNDEK 190
Score = 50 (22.7 bits), Expect = 6.7e-16, Sum P(4) = 6.7e-16
Identities = 22/75 (29%), Positives = 33/75 (44%)
Query: 400 RPGRSKLSLKAANAGNPADKPLSRAKKPS-NVDSPSSMESLTLTKK---SLSRKVGRTNA 455
R SK S K PA + K+P+ SP+ S +K+ SL K +
Sbjct: 558 RKSNSK-SEKVDAVKLPAGQKRLTGKRPTIEKGSPTKKNSGVASKRGTASLMAKRDSETS 616
Query: 456 SQRAESATRGRKRSR 470
+ S+TR +KRS+
Sbjct: 617 EKETGSSTRPKKRSK 631
>FB|FBgn0039654 [details] [associations]
symbol:Brd8 "Brd8" species:7227 "Drosophila melanogaster"
[GO:0010629 "negative regulation of gene expression" evidence=IMP]
InterPro:IPR001487 Pfam:PF00439 PROSITE:PS50014 SMART:SM00297
GO:GO:0010629 Gene3D:1.20.920.10 SUPFAM:SSF47370
FlyBase:FBgn0039654 EMBL:AY069837 ProteinModelPortal:Q8T9B8
SMR:Q8T9B8 STRING:Q8T9B8 PRIDE:Q8T9B8 InParanoid:Q8T9B8
ArrayExpress:Q8T9B8 Bgee:Q8T9B8 Uniprot:Q8T9B8
Length = 874
Score = 121 (47.7 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 37/145 (25%), Positives = 61/145 (42%)
Query: 217 RDVKEGSVGESDFLGVPDAKPVY--RRKENSTPVSGQFARSSGADDQSGSLRKDSIDDIK 274
RD E + + D D RR+ +STPV S + + + R+ K
Sbjct: 677 RDRSESPMVDDDATTASDHSTARSTRRRCSSTPVIDSIPNSPASSEHTDDRRETRAASKK 736
Query: 275 ---GVFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTXXXXXXXXXXXXXKELFR 331
++ + ++ A F+ + R+ + LR MD T EL R
Sbjct: 737 LFLSIYAMLLDSKHAAPFKRPFHDEHAQRHADLCLRPMDFPTIKRNIDSGFIRSLSELHR 796
Query: 332 DLLLLANNAVVFYSKNTREHKSAFL 356
D+LL+A+N +V Y +T +HK+A L
Sbjct: 797 DVLLMAHNVLVAYKPHTTQHKTARL 821
Score = 59 (25.8 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 6 IEVWGTWEELLLGGAVLRHGTRDWNLVAAELRARTVC 42
++ W E+L+L AV G ++W V+ L+ T+C
Sbjct: 16 LDTWSKREQLILASAVSCSGDQNWITVSRTLK--TIC 50
Score = 44 (20.5 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 7/33 (21%), Positives = 21/33 (63%)
Query: 72 LRKQRMAELKRALELSENSIGSLESKLETLKAE 104
L ++R AE+K + + + ++ ++E+L+++
Sbjct: 111 LTEERQAEIKAQMRQDQETYRRIQREIESLQSD 143
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.128 0.368 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 472 425 0.00084 118 3 11 23 0.44 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 619 (66 KB)
Total size of DFA: 255 KB (2136 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.68u 0.11s 37.79t Elapsed: 00:00:02
Total cpu time: 37.68u 0.11s 37.79t Elapsed: 00:00:02
Start: Tue May 21 08:22:59 2013 End: Tue May 21 08:23:01 2013