Query 012057
Match_columns 472
No_of_seqs 285 out of 1836
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 20:46:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012057.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012057hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 2.7E-64 9.1E-69 524.8 34.5 338 75-429 25-414 (448)
2 1rmg_A Rgase A, rhamnogalactur 100.0 1.4E-60 4.9E-65 494.7 42.3 344 75-463 18-367 (422)
3 1bhe_A PEHA, polygalacturonase 100.0 3.4E-58 1.2E-62 471.5 41.0 333 77-444 14-375 (376)
4 2uvf_A Exopolygalacturonase; G 100.0 7.7E-56 2.6E-60 478.6 35.5 362 74-449 153-583 (608)
5 1czf_A Polygalacturonase II; b 100.0 6.8E-55 2.3E-59 443.4 35.1 323 76-443 28-358 (362)
6 2iq7_A Endopolygalacturonase; 100.0 1.4E-54 4.6E-59 438.5 35.6 318 92-442 6-332 (339)
7 1nhc_A Polygalacturonase I; be 100.0 1.5E-54 5.2E-59 437.6 34.3 320 91-443 5-332 (336)
8 1hg8_A Endopolygalacturonase; 100.0 7.3E-54 2.5E-58 434.3 37.3 321 93-443 7-345 (349)
9 1ia5_A Polygalacturonase; glyc 100.0 1.9E-53 6.4E-58 429.9 36.9 317 93-443 11-335 (339)
10 1k5c_A Endopolygalacturonase; 100.0 1.1E-53 3.7E-58 430.2 25.3 312 94-445 8-331 (335)
11 2x6w_A Tail spike protein; vir 100.0 6.2E-48 2.1E-52 404.6 19.5 297 75-428 49-384 (600)
12 1x0c_A Isopullulanase; glycosi 100.0 3.3E-40 1.1E-44 350.9 20.5 305 78-428 143-521 (549)
13 1h80_A IOTA-carrageenase; hydr 100.0 1.3E-39 4.4E-44 338.9 20.3 292 74-423 18-341 (464)
14 3gq8_A Preneck appendage prote 100.0 9.4E-38 3.2E-42 329.2 24.7 269 75-398 20-308 (609)
15 1ogo_X Dextranase; hydrolase, 100.0 3.6E-37 1.2E-41 327.3 25.4 273 107-428 229-546 (574)
16 3gqn_A Preneck appendage prote 100.0 2.1E-37 7.1E-42 331.1 22.7 269 75-398 20-308 (772)
17 2vbk_A Tailspike-protein; vira 100.0 6.8E-32 2.3E-36 269.7 10.1 212 75-333 49-286 (514)
18 2pyg_A Poly(beta-D-mannuronate 100.0 2.9E-29 1E-33 257.0 29.6 192 77-301 2-216 (377)
19 3jur_A EXO-poly-alpha-D-galact 99.9 2.2E-24 7.4E-29 224.5 25.5 225 158-428 189-444 (448)
20 3eqn_A Glucan 1,3-beta-glucosi 99.9 1.1E-22 3.8E-27 217.8 22.9 264 74-397 46-328 (758)
21 2uvf_A Exopolygalacturonase; G 99.9 1.2E-21 4.1E-26 211.6 28.0 246 158-450 330-606 (608)
22 1ia5_A Polygalacturonase; glyc 99.9 4E-20 1.4E-24 186.3 28.6 214 210-449 66-322 (339)
23 1czf_A Polygalacturonase II; b 99.9 2.3E-20 7.9E-25 189.4 27.0 213 210-449 89-345 (362)
24 2iq7_A Endopolygalacturonase; 99.9 7E-20 2.4E-24 184.6 28.7 214 210-449 62-320 (339)
25 1nhc_A Polygalacturonase I; be 99.9 1.5E-19 5.2E-24 181.9 28.3 213 210-449 62-319 (336)
26 1k5c_A Endopolygalacturonase; 99.8 1.6E-19 5.4E-24 181.5 23.2 223 168-439 39-301 (335)
27 1bhe_A PEHA, polygalacturonase 99.8 3.5E-19 1.2E-23 182.1 26.0 222 132-399 108-364 (376)
28 1hg8_A Endopolygalacturonase; 99.8 9.8E-19 3.3E-23 176.8 28.0 204 210-439 63-317 (349)
29 1rmg_A Rgase A, rhamnogalactur 99.8 2.3E-18 7.9E-23 178.2 31.1 169 233-429 129-311 (422)
30 1ogo_X Dextranase; hydrolase, 99.8 3.7E-17 1.3E-21 173.9 22.6 237 109-399 264-546 (574)
31 1x0c_A Isopullulanase; glycosi 99.7 7.6E-17 2.6E-21 171.4 22.3 248 109-399 222-521 (549)
32 2inu_A Insulin fructotransfera 99.6 5.8E-14 2E-18 141.2 18.0 233 73-340 10-283 (410)
33 1h80_A IOTA-carrageenase; hydr 99.5 5.2E-13 1.8E-17 138.9 19.4 159 214-409 106-279 (464)
34 3gq8_A Preneck appendage prote 99.4 7.3E-11 2.5E-15 124.9 26.9 188 233-428 170-400 (609)
35 2x6w_A Tail spike protein; vir 99.4 1.4E-11 4.8E-16 129.7 21.1 232 132-424 149-408 (600)
36 3gqn_A Preneck appendage prote 99.4 1.1E-10 3.7E-15 125.6 26.3 208 233-448 170-426 (772)
37 2pyg_A Poly(beta-D-mannuronate 99.3 1.6E-10 5.5E-15 117.6 20.3 193 210-429 150-361 (377)
38 3eqn_A Glucan 1,3-beta-glucosi 99.2 1.2E-10 4.3E-15 125.1 15.0 67 73-146 396-465 (758)
39 1ru4_A Pectate lyase, PEL9A; p 99.0 1.7E-08 5.6E-13 103.5 21.0 245 74-368 13-299 (400)
40 1pcl_A Pectate lyase E; lyase 98.8 4.2E-07 1.4E-11 91.3 22.1 78 256-333 131-228 (355)
41 3vmv_A Pectate lyase; polysacc 98.6 6.3E-06 2.2E-10 81.7 21.3 117 257-394 119-249 (326)
42 1dbg_A Chondroitinase B; beta 98.6 1.1E-06 3.6E-11 92.4 16.3 207 93-340 30-272 (506)
43 1pxz_A Major pollen allergen J 98.5 1.7E-06 5.7E-11 86.8 16.4 127 232-367 106-255 (346)
44 2qy1_A Pectate lyase II; GAG l 98.5 2E-06 6.8E-11 85.7 16.4 165 210-395 65-250 (330)
45 3zsc_A Pectate trisaccharide-l 98.5 3.4E-06 1.2E-10 83.9 17.4 160 217-395 68-250 (340)
46 1air_A Pectate lyase C, PELC; 98.5 3.2E-06 1.1E-10 84.9 17.3 162 210-395 81-261 (353)
47 1idk_A Pectin lyase A; signal, 98.5 1E-05 3.5E-10 81.4 19.9 130 239-395 132-280 (359)
48 1vbl_A Pectate lyase 47; PL 47 98.5 1.7E-06 5.9E-11 88.5 14.4 118 212-332 127-282 (416)
49 3zsc_A Pectate trisaccharide-l 98.5 3.2E-05 1.1E-09 76.9 23.1 132 210-363 84-251 (340)
50 1qcx_A Pectin lyase B; beta-he 98.4 1.8E-05 6.2E-10 79.6 20.2 132 239-397 132-282 (359)
51 2x3h_A K5 lyase, K5A lyase; ba 98.4 0.00011 3.9E-09 70.2 23.4 169 75-288 62-247 (542)
52 2o04_A Pectate lyase, PL; hexa 98.4 2.7E-06 9.3E-11 86.6 13.3 117 212-332 122-276 (399)
53 1pxz_A Major pollen allergen J 98.3 2.6E-05 9E-10 78.0 18.4 131 210-362 107-272 (346)
54 1pe9_A Pectate lyase A; parall 98.3 7.7E-06 2.6E-10 82.2 13.7 114 216-332 86-238 (361)
55 1air_A Pectate lyase C, PELC; 98.2 2.5E-05 8.6E-10 78.3 15.6 140 210-366 104-265 (353)
56 1idk_A Pectin lyase A; signal, 98.2 2.7E-05 9.4E-10 78.2 15.9 135 211-366 126-284 (359)
57 1gq8_A Pectinesterase; hydrola 98.2 0.0001 3.4E-09 73.0 19.0 131 215-362 92-244 (319)
58 1qcx_A Pectin lyase B; beta-he 98.1 6.5E-05 2.2E-09 75.5 17.3 136 210-366 125-284 (359)
59 1xg2_A Pectinesterase 1; prote 98.1 9.3E-05 3.2E-09 73.2 17.8 131 215-362 88-240 (317)
60 2qy1_A Pectate lyase II; GAG l 98.1 5.8E-05 2E-09 75.1 16.5 140 210-366 87-254 (330)
61 2o04_A Pectate lyase, PL; hexa 98.0 0.00022 7.6E-09 72.5 17.2 112 210-332 144-298 (399)
62 1vbl_A Pectate lyase 47; PL 47 98.0 0.0002 7E-09 73.2 16.8 135 210-361 149-333 (416)
63 2inu_A Insulin fructotransfera 97.9 0.00026 9E-09 71.3 16.7 131 217-368 136-282 (410)
64 1pe9_A Pectate lyase A; parall 97.9 0.0003 1E-08 70.7 16.9 112 210-331 104-259 (361)
65 2nsp_A Pectinesterase A; micha 97.7 0.0023 8E-08 63.8 19.0 134 215-361 94-275 (342)
66 1ru4_A Pectate lyase, PEL9A; p 97.6 0.00032 1.1E-08 71.6 12.2 108 211-332 110-230 (400)
67 3uw0_A Pectinesterase; right-h 97.6 0.0032 1.1E-07 63.2 18.6 91 260-361 158-255 (364)
68 2vbk_A Tailspike-protein; vira 97.5 0.00019 6.6E-09 72.5 8.5 75 210-307 197-290 (514)
69 1pcl_A Pectate lyase E; lyase 97.2 0.0031 1.1E-07 63.1 13.0 133 211-362 74-228 (355)
70 3vmv_A Pectate lyase; polysacc 97.0 0.0021 7.1E-08 63.6 9.3 75 279-361 119-204 (326)
71 3t9g_A Pectate lyase; PL3, par 96.8 0.063 2.2E-06 48.2 16.4 131 240-398 52-185 (196)
72 3grh_A YBHC, acyl-COA thioeste 96.4 0.25 8.6E-06 50.1 19.6 46 93-141 88-136 (422)
73 3t9g_A Pectate lyase; PL3, par 95.8 0.44 1.5E-05 42.7 15.8 133 216-363 51-183 (196)
74 1dbg_A Chondroitinase B; beta 95.5 0.063 2.2E-06 56.2 10.9 146 210-362 217-392 (506)
75 1gq8_A Pectinesterase; hydrola 95.4 0.11 3.8E-06 51.1 11.8 112 238-362 92-210 (319)
76 1xg2_A Pectinesterase 1; prote 95.2 0.1 3.5E-06 51.3 10.8 112 238-362 88-206 (317)
77 1ee6_A Pectate lyase; parallel 95.0 0.37 1.3E-05 43.4 12.5 109 240-367 48-159 (197)
78 2nsp_A Pectinesterase A; micha 94.2 0.38 1.3E-05 47.7 12.0 112 238-361 94-230 (342)
79 1ee6_A Pectate lyase; parallel 93.5 1.1 3.8E-05 40.3 12.3 132 216-362 47-178 (197)
80 3ju4_A Endo-N-acetylneuraminid 92.7 0.034 1.2E-06 55.7 1.6 40 83-125 4-43 (670)
81 3b4n_A Endo-pectate lyase; pec 92.1 3.3 0.00011 40.3 14.4 127 241-394 159-301 (344)
82 3grh_A YBHC, acyl-COA thioeste 90.0 2.2 7.5E-05 43.2 11.5 17 213-229 197-213 (422)
83 3b4n_A Endo-pectate lyase; pec 88.1 6.6 0.00022 38.2 12.8 166 169-360 124-300 (344)
84 3uw0_A Pectinesterase; right-h 87.3 2.4 8.1E-05 42.3 9.6 136 214-361 119-299 (364)
85 2vfm_A Bifunctional tail prote 68.2 27 0.00093 34.2 9.8 81 266-361 269-373 (559)
86 2v5i_A Salmonella typhimurium 67.1 27 0.00092 34.2 9.5 81 266-361 272-376 (559)
87 3riq_A Tailspike protein; righ 62.3 66 0.0023 32.2 11.3 68 266-340 262-351 (543)
88 2xc1_A Bifunctional tail prote 61.4 40 0.0014 34.3 9.8 81 266-361 376-480 (666)
89 3riq_A Tailspike protein; righ 57.6 1.6E+02 0.0054 29.5 13.7 67 289-357 262-343 (543)
90 2l9u_A Receptor tyrosine-prote 54.2 6.2 0.00021 24.9 1.7 10 23-32 29-38 (40)
91 3fwy_A Light-independent proto 48.2 18 0.00062 34.9 4.9 38 73-116 46-84 (314)
92 2es4_D Lipase chaperone; prote 46.4 8.2 0.00028 37.8 2.1 7 96-102 84-90 (332)
93 2x3h_A K5 lyase, K5A lyase; ba 41.7 1.4E+02 0.0047 28.7 9.6 39 320-359 166-205 (542)
94 3p8k_A Hydrolase, carbon-nitro 26.2 61 0.0021 30.3 4.5 28 90-117 35-62 (281)
95 2j9r_A Thymidine kinase; TK1, 20.6 1.4E+02 0.0048 27.0 5.6 35 77-115 29-63 (214)
96 1j5p_A Aspartate dehydrogenase 20.2 62 0.0021 30.2 3.2 34 78-117 87-120 (253)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=2.7e-64 Score=524.83 Aligned_cols=338 Identities=25% Similarity=0.393 Sum_probs=295.9
Q ss_pred CceEEeeeecccCCCCcchHHHHHHHHHHHhhcCCcEEEecCCcEEEEeeeeecCCCCCceEEEeCceEeCCCCCCCC-C
Q 012057 75 DCIFDVRDYGAVGDGSADDTAAFRAAWKAACAVEAGVVLAPSDYVFKITSTIFSGPCKPGLVFQLDGVLMPPDGPDTW-P 153 (472)
Q Consensus 75 ~~~~~V~dfGA~gDG~tDdT~Aiq~Ai~~a~~~~g~~V~iP~G~ty~i~~~~l~gp~~s~v~l~~~Gtl~~~~~~~~~-~ 153 (472)
+.+|||++|||+|||+||||+|||+||+++++.++++|+||+| +|+++++.| +++++|+++|+|+++.++.+| |
T Consensus 25 ~~~~~v~~~GA~gdg~tddt~Aiq~Ai~~c~~~ggg~v~vP~G-~yl~~~l~l----~s~v~l~l~gtL~~s~d~~~y~p 99 (448)
T 3jur_A 25 DREVNLLDFGARGDGRTDCSESFKRAIEELSKQGGGRLIVPEG-VFLTGPIHL----KSNIELHVKGTIKFIPDPERYLP 99 (448)
T ss_dssp SCEEEGGGGTCCCEEEEECHHHHHHHHHHHHHHTCEEEEECSS-EEEESCEEC----CTTEEEEESSEEEECCCGGGGCS
T ss_pred CcEEEEEecccCCCCCeecHHHHHHHHHhhhhcCCeEEEECCC-cEEEeeeEe----CCCcEEEEEEEEEecCCHHHhCc
Confidence 5789999999999999999999999999655567899999999 899999988 899999999999999999998 5
Q ss_pred CCC---------CCceEEEEEeecCcEEEeeeeeecCC--CcccCCCCCCCCC-----CC------------------CC
Q 012057 154 KAD---------SRKQWLVFYKLDDMTFTGKGTIEGNG--QPWWDLPCKPHRG-----PN------------------GS 199 (472)
Q Consensus 154 ~~~---------~~~~~i~~~~~~nvtI~G~GtIdG~g--~~~w~~~~~~~~g-----~~------------------g~ 199 (472)
... ...+||.+.+++||+|+|.|+|||+| +.||.+......+ +. ..
T Consensus 100 ~~~~~~~G~~~~~~~~lI~~~~~~ni~ItG~GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~ 179 (448)
T 3jur_A 100 VVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEE 179 (448)
T ss_dssp CEEEEETTEEEEESCCSEEEESCEEEEEESSCEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHHHHHHHTCCGGG
T ss_pred ccccccccccccCccceEEEeCcEeeEEEEeEEEECCCCchhhhhhcccccccccccccccccchhhhhhhhcccCcchh
Confidence 321 12468999999999999999999999 8899854321100 00 00
Q ss_pred CC--CCCCCCCeEEEEEeeeeEEEeceEEecCCCCeeeeeccccEEEEeEEEeCCCCCCCCCceeeecceeEEEEceEEe
Q 012057 200 TS--SGPCDSPALIRFFMSSNLVVSGLTIQNSPQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYNSMIS 277 (472)
Q Consensus 200 ~~--~g~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~ 277 (472)
.. .+...||++|.|.+|+|++|+|++++|++.|++++..|+|++|++++|.++ ++|+|||++.+|+||+|+||+|.
T Consensus 180 ~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~nV~I~n~~i~ 257 (448)
T 3jur_A 180 RVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEKCRFD 257 (448)
T ss_dssp CBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEEEEEESCEEE
T ss_pred hhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcCEEEEeeEEE
Confidence 00 123378999999999999999999999999999999999999999999996 68999999999999999999999
Q ss_pred cCCceEEeCCC-----------ceeEEEEeeee--cCCC-cceecccCccCCCCcEEEEEEEeEEEecCCceEEEEeecC
Q 012057 278 NGDDCISIGTG-----------CSDVDIADVTC--GPSH-GISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKTWQG 343 (472)
Q Consensus 278 ~gDD~I~i~s~-----------s~nI~I~n~~~--~~~~-gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~~g 343 (472)
++||||+++++ ++||+|+||+| ..+| ||+|||++ .+.++||+|+||++.++++|++||+|.+
T Consensus 258 ~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~----~~~v~nV~v~n~~~~~t~~GirIKt~~g 333 (448)
T 3jur_A 258 TGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEM----SGGVRNVVARNNVYMNVERALRLKTNSR 333 (448)
T ss_dssp ESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSC----TTCEEEEEEESCEEESCSEEEEEECCTT
T ss_pred eCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcc----cCcEEEEEEEEEEEecccceEEEEEEcC
Confidence 99999999997 89999999999 5576 89999986 4689999999999999999999999988
Q ss_pred CCceeeeEEEEeEEEEccCeeE-EEEeeccCCccccCCCCceEEEeEEEEeEEEEeeCCCCceEEecCCCCceeeEEEEE
Q 012057 344 GTGCVSDLSFENIQMENVRNCI-NIDQYYCLSKECLNQTSAVFVTGITYRNIKGTYDVRTPPIHFACSDTVPCTKITMAE 422 (472)
Q Consensus 344 ~~g~v~nI~f~Ni~~~~v~~~i-~I~~~~~~~~~~~~~~~~~~i~nI~f~nI~~t~~~~~~~~~i~~~~~~~~~~i~~~n 422 (472)
+.|.|+||+|+||+|+++.+++ .|+++|+.. + ....+.|+||+|+||+++.. ..++.+.|+++.+|+||+|+|
T Consensus 334 ~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~--~--~~~~~~i~nI~~~NI~~t~~--~~~i~i~g~~~~p~~~I~~~n 407 (448)
T 3jur_A 334 RGGYMENIFFIDNVAVNVSEEVIRINLRYDNE--E--GEYLPVVRSVFVKNLKATGG--KYAVRIEGLENDYVKDILISD 407 (448)
T ss_dssp TCSEEEEEEEESCEEEEESSEEEEEESCGGGC--C--CSCCCEEEEEEEESCEEEEC--SEEEEEECBTTBCEEEEEEEE
T ss_pred CCceEeeEEEEEEEEECCccccEEEEeeccCC--C--CCCCceEEEEEEEeEEEEec--ceEEEEEeCCCCCEeeEEEEE
Confidence 8899999999999999999988 999999864 2 33567999999999999873 247899999999999999999
Q ss_pred EEEEcCC
Q 012057 423 VELLPYE 429 (472)
Q Consensus 423 i~~~~~~ 429 (472)
|+++...
T Consensus 408 v~i~~~~ 414 (448)
T 3jur_A 408 TIIEGAK 414 (448)
T ss_dssp EEEESCS
T ss_pred EEEEccc
Confidence 9999754
No 2
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=1.4e-60 Score=494.72 Aligned_cols=344 Identities=26% Similarity=0.491 Sum_probs=300.5
Q ss_pred CceEEeeeecccCCCCcchHHHHHHHHHHHhhcCCcEEEecCCcEEEEee-eeecCCCCCceEEEeCceEeCCCCCCCCC
Q 012057 75 DCIFDVRDYGAVGDGSADDTAAFRAAWKAACAVEAGVVLAPSDYVFKITS-TIFSGPCKPGLVFQLDGVLMPPDGPDTWP 153 (472)
Q Consensus 75 ~~~~~V~dfGA~gDG~tDdT~Aiq~Ai~~a~~~~g~~V~iP~G~ty~i~~-~~l~gp~~s~v~l~~~Gtl~~~~~~~~~~ 153 (472)
..+++|++|||+|||++|||+|||+||+ ||+ ++++|+||+| +|++++ +.|.| .++++|+++|+++...+.
T Consensus 18 ~~~~~V~~~GA~~dg~tddT~Aiq~Ai~-ac~-~g~~V~vP~G-~Yli~~~l~l~g--~s~v~l~l~G~~l~~~~~---- 88 (422)
T 1rmg_A 18 TKTCNILSYGAVADNSTDVGPAITSAWA-ACK-SGGLVYIPSG-NYALNTWVTLTG--GSATAIQLDGIIYRTGTA---- 88 (422)
T ss_dssp HCEEEGGGGTCCCSSSSBCHHHHHHHHH-HHT-BTCEEEECSS-EEEECSCEEEES--CEEEEEEECSEEEECCCC----
T ss_pred CcEEEeeeccccCCCCcccHHHHHHHHH-HCC-CCCEEEECCC-eEEeCCceeecC--CCeEEEEEcCcEEcccCC----
Confidence 5689999999999999999999999999 676 4889999999 899986 99987 589999999987765431
Q ss_pred CCCCCceEEEEE---eecCcEEEeeeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEeeeeEEEeceEEecCC
Q 012057 154 KADSRKQWLVFY---KLDDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNLVVSGLTIQNSP 230 (472)
Q Consensus 154 ~~~~~~~~i~~~---~~~nvtI~G~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~~~nv~I~~v~i~ns~ 230 (472)
...|+.+. +.++++|+|.|+|||+|..||.. +. .||++|+|.+|+|++|+|++++|++
T Consensus 89 ----~~~~~~~~~~~~~~~i~i~G~G~IdG~G~~~w~~---------~~------~rp~~i~~~~~~nv~I~~iti~nsp 149 (422)
T 1rmg_A 89 ----SGNMIAVTDTTDFELFSSTSKGAVQGFGYVYHAE---------GT------YGARILRLTDVTHFSVHDIILVDAP 149 (422)
T ss_dssp ----SSEEEEEEEEEEEEEECSSSCCEEECCTHHHHTT---------TC------CCCEEEEEEEEEEEEEEEEEEECCS
T ss_pred ----CCceEEEEecCceeEEeeccCEEEECCcchhhcC---------CC------CCceEEEEcccceEEEECeEEECCC
Confidence 13455544 45556678999999999999953 11 3899999999999999999999999
Q ss_pred CCeeeeeccccEEEEeEEEeCCCCCCCCCceeeecceeEEEEceEEecCCceEEeCCCceeEEEEeeeecCCCcceeccc
Q 012057 231 QFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYNSMISNGDDCISIGTGCSDVDIADVTCGPSHGISIGSL 310 (472)
Q Consensus 231 ~~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~gDD~I~i~s~s~nI~I~n~~~~~~~gi~iGs~ 310 (472)
.|++++..|+||+|+|++|.+ ...+|+|||++.+ +||+|+||+|+++||||+++++++||+|+||+|..+|||+|||+
T Consensus 150 ~~~i~i~~~~nv~I~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~~~nI~I~n~~~~~~~GisIGS~ 227 (422)
T 1rmg_A 150 AFHFTMDTCSDGEVYNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSPANNILVESIYCNWSGGCAMGSL 227 (422)
T ss_dssp SCSEEEEEEEEEEEEEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEEEEEEEEEEEEEESSSEEEEEEE
T ss_pred ceEEEEeCcCCEEEEeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCCCcCEEEEeEEEcCCcceeeccc
Confidence 999999999999999999999 4457999999999 99999999999999999999999999999999999999999998
Q ss_pred CccCCCCcEEEEEEEeEEEecCCceEEEEeecCCCceeeeEEEEeEEEEccCeeEEEEeeccCCccccCCCCceEEEeEE
Q 012057 311 GAHYSQACVSNITVRNAIIRESDNGLRIKTWQGGTGCVSDLSFENIQMENVRNCINIDQYYCLSKECLNQTSAVFVTGIT 390 (472)
Q Consensus 311 ~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~v~~~i~I~~~~~~~~~~~~~~~~~~i~nI~ 390 (472)
++ .+.++||+|+||++.++.+|++||++.+ .|.|+||+|+||+|++++++|.|+++|+.. +....+.+.|+||+
T Consensus 228 g~---~~~v~nV~v~n~~~~~~~~Gi~Ikt~~g-~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~--~~~~~~~~~i~nI~ 301 (422)
T 1rmg_A 228 GA---DTDVTDIVYRNVYTWSSNQMYMIKSNGG-SGTVSNVLLENFIGHGNAYSLDIDGYWSSM--TAVAGDGVQLNNIT 301 (422)
T ss_dssp CT---TEEEEEEEEEEEEEESSSCSEEEEEBBC-CEEEEEEEEEEEEEEEESCSEEEETBCTTS--CCBSSSCCEEEEEE
T ss_pred CC---CCcEEEEEEEeEEEeccceEEEEEecCC-CcEEEEEEEEeEEEECccccEEEEeeccCC--CcccCCCceEEEEE
Confidence 74 3589999999999999999999999654 589999999999999999999999999763 23346788999999
Q ss_pred EEeEEEEeeC--CCCceEEecCCCCceeeEEEEEEEEEcCCCCccCCceeecceeeeeeeecCCccccCCCCCCc
Q 012057 391 YRNIKGTYDV--RTPPIHFACSDTVPCTKITMAEVELLPYEGQLLDDPFCWNAYGTQETLTIPPIDCLQEGEPQS 463 (472)
Q Consensus 391 f~nI~~t~~~--~~~~~~i~~~~~~~~~~i~~~ni~~~~~~~~~~~~~~c~~~~g~~~~~~~~~~~~~~~~~~~~ 463 (472)
|+||+++... ...++.+.|++..+|+||+|+||+++...+... ...|+|++|.. .||+++.|..
T Consensus 302 ~~nI~gt~~~g~~~~~i~i~~~~~~~~~ni~l~nv~i~~~~g~~~-~~~C~n~~g~g--------~C~~~~~~~~ 367 (422)
T 1rmg_A 302 VKNWKGTEANGATRPPIRVVCSDTAPCTDLTLEDIAIWTESGSSE-LYLCRSAYGSG--------YCLKDSSSHT 367 (422)
T ss_dssp EEEEEEEESCTTTSCSEEEECBTTBCEEEEEEEEEEEEESSSSCE-EEEEESEEEES--------TTCBCCSSCC
T ss_pred EEeEEEEecccccceeEEEEeCCCCcEeeEEEEeEEEEcCCCCcc-ceEEECCCccc--------cccCCCCCcc
Confidence 9999998742 234789999999999999999999998877543 47999999975 7999988764
No 3
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=3.4e-58 Score=471.53 Aligned_cols=333 Identities=25% Similarity=0.380 Sum_probs=290.5
Q ss_pred eEEeeeecccCCCCcchHHHHHHHHHHHhhcCCcEEEecC---CcEEEEeeeeecCCCCCceEEEeCc--eEeCCCCCCC
Q 012057 77 IFDVRDYGAVGDGSADDTAAFRAAWKAACAVEAGVVLAPS---DYVFKITSTIFSGPCKPGLVFQLDG--VLMPPDGPDT 151 (472)
Q Consensus 77 ~~~V~dfGA~gDG~tDdT~Aiq~Ai~~a~~~~g~~V~iP~---G~ty~i~~~~l~gp~~s~v~l~~~G--tl~~~~~~~~ 151 (472)
+++|++|| .+|||+|||+||+ ||+. |++|++|+ | +|+++++.| +++++|++++ +|+++.++..
T Consensus 14 ~~~v~~~G-----~~~dT~aiq~Ai~-ac~~-Gg~v~~~~~~~g-~yl~g~i~l----~s~vtL~l~~Ga~L~~s~~~~~ 81 (376)
T 1bhe_A 14 SCTTLKAD-----SSTATSTIQKALN-NCDQ-GKAVRLSAGSTS-VFLSGPLSL----PSGVSLLIDKGVTLRAVNNAKS 81 (376)
T ss_dssp EEEEEECC-----SSBCHHHHHHHHT-TCCT-TCEEEEECSSSS-EEEESCEEC----CTTCEEEECTTCEEEECSCSGG
T ss_pred eEEECCCC-----CCccHHHHHHHHH-Hhcc-CCcEEEECCCCc-eEEEeEEEE----CCCCEEEECCCeEEEeCCCHHH
Confidence 59999986 6899999999999 6776 56666654 6 899999998 8999999985 8999999999
Q ss_pred CCCCC-----------CCceEEEEEeecCcEEEeeeeeecCC--------CcccCCCCCCCCCCCCCCCCCCCCCCeEEE
Q 012057 152 WPKAD-----------SRKQWLVFYKLDDMTFTGKGTIEGNG--------QPWWDLPCKPHRGPNGSTSSGPCDSPALIR 212 (472)
Q Consensus 152 ~~~~~-----------~~~~~i~~~~~~nvtI~G~GtIdG~g--------~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~ 212 (472)
|+... ...+||.+.+++||+|+|.|+|||+| +.||+.....+. .+. ...||++|.
T Consensus 82 y~~~~~~~g~~~~~g~~~~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~--~~~----~~~rp~~i~ 155 (376)
T 1bhe_A 82 FENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKV--KKL----KQNTPRLIQ 155 (376)
T ss_dssp GBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHH--HTC----EECCCCSEE
T ss_pred CcCCCccccccccCCCCcccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccc--cCc----cCCCCeEEE
Confidence 97642 13578999999999999999999999 468863210000 000 115899999
Q ss_pred EEeeeeEEEeceEEecCCCCeeeeeccccEEEEeEEEeCCCCCCCCCceeeecceeEEEEceEEecCCceEEeCC-----
Q 012057 213 FFMSSNLVVSGLTIQNSPQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYNSMISNGDDCISIGT----- 287 (472)
Q Consensus 213 ~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~gDD~I~i~s----- 287 (472)
|.+|+|++|+|++++|++.|++++..|++++|++++|.++..++|+|||++.+|++|+|+||+|.++||||++++
T Consensus 156 ~~~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks~~~~~ 235 (376)
T 1bhe_A 156 INKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRA 235 (376)
T ss_dssp EESCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECTTSC
T ss_pred EEcceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEcccCCCC
Confidence 999999999999999999999999999999999999999888899999999999999999999999999999995
Q ss_pred CceeEEEEeeeecCCCcceecccCccCCCCcEEEEEEEeEEEecCCceEEEEeecCCCceeeeEEEEeEEEEccCeeEEE
Q 012057 288 GCSDVDIADVTCGPSHGISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKTWQGGTGCVSDLSFENIQMENVRNCINI 367 (472)
Q Consensus 288 ~s~nI~I~n~~~~~~~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~v~~~i~I 367 (472)
+++||+|+||+|.++|||+|||++ ..++||+|+||++.++.+|++||+|.++.|.|+||+|+||+|+++.+||.|
T Consensus 236 ~s~nI~I~n~~~~~ghGisiGSe~-----~~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~ni~f~ni~~~~v~~~i~i 310 (376)
T 1bhe_A 236 ETRNISILHNDFGTGHGMSIGSET-----MGVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVI 310 (376)
T ss_dssp CEEEEEEEEEEECSSSCEEEEEEE-----SSEEEEEEEEEEEESCSEEEEEECCTTTCCEEEEEEEEEEEEESCSEEEEE
T ss_pred CceEEEEEeeEEEccccEEeccCC-----ccEeeEEEEeeEEeCCCcEEEEEEecCCCceEeeEEEEeEEEeCCCceEEE
Confidence 699999999999999999999986 279999999999999999999999999999999999999999999999999
Q ss_pred EeeccCCccccCCCCceEEEeEEEEeEEEEeeCCCCceEEecCCCCceeeEEEEEEEEEcCCCCccCCceeecceee
Q 012057 368 DQYYCLSKECLNQTSAVFVTGITYRNIKGTYDVRTPPIHFACSDTVPCTKITMAEVELLPYEGQLLDDPFCWNAYGT 444 (472)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~i~nI~f~nI~~t~~~~~~~~~i~~~~~~~~~~i~~~ni~~~~~~~~~~~~~~c~~~~g~ 444 (472)
++.|+... ....+.|+||+|+||+++.. .++.+.|+++.+|++|+|+||++.... ...|.|++..
T Consensus 311 ~~~y~~~~----~~~~~~i~ni~~~ni~gt~~---~~~~l~g~~~~~~~~I~l~nv~l~~~~-----~~~~~~~~~~ 375 (376)
T 1bhe_A 311 DTVYEKKE----GSNVPDWSDITFKDVTSETK---GVVVLNGENAKKPIEVTMKNVKLTSDS-----TWQIKNVNVK 375 (376)
T ss_dssp ETTSSCCC----CCCCCEEEEEEEEEEEECSC---CEEEEECTTCSSCEEEEEEEEECCTTC-----EEEEESEEEE
T ss_pred EeeccCCC----CCcCcEEEEEEEEEEEEEec---ceEEEEeCCCCCeeeEEEEeEEEecCC-----CceEEEEEec
Confidence 99997642 34467899999999999864 268899999999999999999999863 3789998754
No 4
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=7.7e-56 Score=478.59 Aligned_cols=362 Identities=21% Similarity=0.306 Sum_probs=285.7
Q ss_pred CCceEEeeeecccCCCCcchHHHHHHHHHHHhhcCCcEEEecCCcEEEEeeeeecCCCCCceEEEeC--ceEeCCCCCCC
Q 012057 74 TDCIFDVRDYGAVGDGSADDTAAFRAAWKAACAVEAGVVLAPSDYVFKITSTIFSGPCKPGLVFQLD--GVLMPPDGPDT 151 (472)
Q Consensus 74 ~~~~~~V~dfGA~gDG~tDdT~Aiq~Ai~~a~~~~g~~V~iP~G~ty~i~~~~l~gp~~s~v~l~~~--Gtl~~~~~~~~ 151 (472)
.+.++||++|||+|||++|||+|||+||+ +|+. |++|+||+| +|+++++.| +++++|+++ |+|+++.++.+
T Consensus 153 ~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~-~c~~-g~~v~vP~G-~y~~g~i~l----ks~v~L~l~~gatL~~s~d~~~ 225 (608)
T 2uvf_A 153 KPQIVNVRDFGAIDDGKTLNTKAIQQAID-SCKP-GCRVEIPAG-TYKSGALWL----KSDMTLNLQAGAILLGSENPDD 225 (608)
T ss_dssp CCCEEEGGGGTCCSSSSCCCHHHHHHHHH-TCCT-TEEEEECSE-EEEECCEEC----CSSEEEEECTTEEEEECSCGGG
T ss_pred CCCEEecccccccCCCCccCHHHHHHHHH-hcCC-CCEEEECCC-ceEecceec----cCceEEEecCCcEEEecCCHHH
Confidence 46689999999999999999999999998 6766 899999999 899999998 899999995 68999999888
Q ss_pred CCCCC---C------CceEEEEEe--------ecCcEEEeeeeeecCCCcccCCCC-CCCCCC-----------------
Q 012057 152 WPKAD---S------RKQWLVFYK--------LDDMTFTGKGTIEGNGQPWWDLPC-KPHRGP----------------- 196 (472)
Q Consensus 152 ~~~~~---~------~~~~i~~~~--------~~nvtI~G~GtIdG~g~~~w~~~~-~~~~g~----------------- 196 (472)
|+... . ...+|...+ ++||+|+|.|+|||+|..||.... ...++.
T Consensus 226 y~~~~~~~~~~~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~GtIDG~G~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~~~ 305 (608)
T 2uvf_A 226 YPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWLRAKTAEITDELGRSLPQYVASKNSKVHEDG 305 (608)
T ss_dssp SCEEECSSTTCCSCEECCSEEECCSSCCCTTSEEEEEEESSCEEECCCBCEEEEEEEECTTSCEEEEECCCCTTTHHHHB
T ss_pred CcCcceeeeccccccccceEEeeccccccccceeeEEEEeeEEEcCcccccccccccccccccccccccccccccccccc
Confidence 87421 0 124667666 799999999999999998874210 000000
Q ss_pred ------------CCCCCC--CCCCCCeEEEEEeeeeEEEeceEEecCCCCeeeeeccccEEEEeEEEeCCCCCCCCCcee
Q 012057 197 ------------NGSTSS--GPCDSPALIRFFMSSNLVVSGLTIQNSPQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIH 262 (472)
Q Consensus 197 ------------~g~~~~--g~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~ 262 (472)
.|.... ....||++|.|.+|+|++|+|++++|++.|++++..|+|++|++++|.. ..++|+|||+
T Consensus 306 ~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~~NtDGid 384 (608)
T 2uvf_A 306 ILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDANNGDGIE 384 (608)
T ss_dssp SHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTCTTCCSEE
T ss_pred cccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCCCCCCeEE
Confidence 000000 0013899999999999999999999999999999999999999999875 4568999999
Q ss_pred eecceeEEEEceEEecCCceEEeCCC----------ceeEEEEeeeecCCCcc-eecccCccCCCCcEEEEEEEeEEEec
Q 012057 263 IENTKSVGIYNSMISNGDDCISIGTG----------CSDVDIADVTCGPSHGI-SIGSLGAHYSQACVSNITVRNAIIRE 331 (472)
Q Consensus 263 i~~s~nV~I~n~~i~~gDD~I~i~s~----------s~nI~I~n~~~~~~~gi-~iGs~~~~~~~~~i~nI~i~n~~i~~ 331 (472)
+.+|++|+|+||+|.++||||+++++ ++||+|+||+|.++||+ .|||+ ..+.++||+|+||+|.+
T Consensus 385 i~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~----~~~~v~nI~v~n~~~~~ 460 (608)
T 2uvf_A 385 FGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSH----TGAWIEDILAENNVMYL 460 (608)
T ss_dssp EESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESC----CTTCEEEEEEESCEEES
T ss_pred ecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEccc----CCCCEEEEEEEeEEEEC
Confidence 99999999999999999999999875 79999999999999986 58996 36799999999999999
Q ss_pred CCceEEEEeecCCCceeeeEEEEeEEEEcc-CeeEEEEeeccCCcccc--C-CCCceEEEeEEEEeEEEEeeCC-CCceE
Q 012057 332 SDNGLRIKTWQGGTGCVSDLSFENIQMENV-RNCINIDQYYCLSKECL--N-QTSAVFVTGITYRNIKGTYDVR-TPPIH 406 (472)
Q Consensus 332 ~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~v-~~~i~I~~~~~~~~~~~--~-~~~~~~i~nI~f~nI~~t~~~~-~~~~~ 406 (472)
+.+||+||+|.++.|.|+||+|+||+|+++ ++||.|++.|+....+. . ......++||+|+||+...... ..++.
T Consensus 461 t~~GirIKt~~g~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~ 540 (608)
T 2uvf_A 461 TDIGLRAKSTSTIGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIE 540 (608)
T ss_dssp CSEEEEEEEETTTCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEE
T ss_pred CCceEEEeeecCCCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEE
Confidence 999999999988889999999999999999 59999999998643210 0 1122356666666665544311 02343
Q ss_pred E--ecCCCCceeeEEEEEEEEEcCCCCccCCceeecceeeeeeee
Q 012057 407 F--ACSDTVPCTKITMAEVELLPYEGQLLDDPFCWNAYGTQETLT 449 (472)
Q Consensus 407 i--~~~~~~~~~~i~~~ni~~~~~~~~~~~~~~c~~~~g~~~~~~ 449 (472)
+ .|.+..+|+||+|+||+++...+.. -..|.+.+-....++
T Consensus 541 i~g~~~~~~p~~ni~~~nv~i~~~~~~~--i~~~~~~~~~nv~i~ 583 (608)
T 2uvf_A 541 IKGDTANKAWHRLVHVNNVQLNNVTPTA--ISDLRDSEFNKVTFT 583 (608)
T ss_dssp EECBGGGTBCEEEEEEEEEEEESCCCCE--EESEESCEEEEEEEE
T ss_pred EEEEcCCCCccccEEEEeEEEEccCcee--EEeccCceEEeEEEe
Confidence 4 4666789999999999999865322 124555554444444
No 5
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=6.8e-55 Score=443.39 Aligned_cols=323 Identities=24% Similarity=0.413 Sum_probs=275.8
Q ss_pred ceEEeeeecccCCCCcchHHHHHHHHHHHhhc-CCcEEEecCCcEEEEeeeeecCCCCCceEEEeCceEeCCCCCCCCCC
Q 012057 76 CIFDVRDYGAVGDGSADDTAAFRAAWKAACAV-EAGVVLAPSDYVFKITSTIFSGPCKPGLVFQLDGVLMPPDGPDTWPK 154 (472)
Q Consensus 76 ~~~~V~dfGA~gDG~tDdT~Aiq~Ai~~a~~~-~g~~V~iP~G~ty~i~~~~l~gp~~s~v~l~~~Gtl~~~~~~~~~~~ 154 (472)
.++.|++ ++|||+|++ ||+. ++++|+||+| +|+. + ++ ++++++|+++|++.+. ...|..
T Consensus 28 ~~Ctv~~-----------~~aiq~ai~-~c~~~~g~~v~vP~G-~~l~--l--~~-l~~~~~l~~~g~~~~~--~~~w~g 87 (362)
T 1czf_A 28 DSCTFTT-----------AAAAKAGKA-KCSTITLNNIEVPAG-TTLD--L--TG-LTSGTKVIFEGTTTFQ--YEEWAG 87 (362)
T ss_dssp CEEEESS-----------HHHHHHHGG-GCSEEEEESCEECTT-CCEE--E--CS-CCTTCEEEEESEEEEC--CCCSCC
T ss_pred CEEEECC-----------HHHHHHHHH-HhhccCCCEEEECCC-EEEE--e--ec-cCCCeEEEEeCcEEec--cccCCC
Confidence 4577776 679999999 5654 5789999999 5652 2 11 2779999999987652 355653
Q ss_pred CCCCceEEEEEeecCcEEEe--eeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEeeeeEEEeceEEecCCCC
Q 012057 155 ADSRKQWLVFYKLDDMTFTG--KGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNLVVSGLTIQNSPQF 232 (472)
Q Consensus 155 ~~~~~~~i~~~~~~nvtI~G--~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~~~nv~I~~v~i~ns~~~ 232 (472)
+|+.+ +.+||+|+| .|+|||+|+.||+... .++ ..||++++|.+|+|++|+|++++|+|.|
T Consensus 88 -----~~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~-----~~~------~~rP~~i~~~~~~nv~i~~iti~nsp~~ 150 (362)
T 1czf_A 88 -----PLISM-SGEHITVTGASGHLINCDGARWWDGKG-----TSG------KKKPKFFYAHGLDSSSITGLNIKNTPLM 150 (362)
T ss_dssp -----CSEEE-EEESCEEEECTTCEEECCGGGTCCSCT-----TSS------SCCCCCEEEEEEETEEEESCEEECCSSC
T ss_pred -----cEEEE-eCccEEEEcCCCcEEECCCchhhcccC-----CCC------CCCCeEEEEeecccEEEEEEEEecCCcc
Confidence 57777 459999999 6999999999997532 121 2689999999999999999999999999
Q ss_pred eeeeeccccEEEEeEEEeCCCC----CCCCCceeeecceeEEEEceEEecCCceEEeCCCceeEEEEeeeecCCCcceec
Q 012057 233 HMKFDGCEGVMIDKLSISSPKL----SPNTDGIHIENTKSVGIYNSMISNGDDCISIGTGCSDVDIADVTCGPSHGISIG 308 (472)
Q Consensus 233 ~i~~~~~~nv~I~~~~i~~~~~----~~n~DGI~i~~s~nV~I~n~~i~~gDD~I~i~s~s~nI~I~n~~~~~~~gi~iG 308 (472)
++++. |+||+|++++|.++.. ++|+|||++.+|+||+|+||+|.++||||++++ .+||+|+||+|.++|||+||
T Consensus 151 ~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiG 228 (362)
T 1czf_A 151 AFSVQ-ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNS-GENIWFTGGTCIGGHGLSIG 228 (362)
T ss_dssp CEEEE-CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSCCEEEE
T ss_pred EEEEe-eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeC-CeEEEEEEEEEeCCceeEEe
Confidence 99999 9999999999999632 789999999999999999999999999999999 59999999999999999999
Q ss_pred ccCccCCCCcEEEEEEEeEEEecCCceEEEEeecCCCceeeeEEEEeEEEEccC-eeEEEEeeccCCccccCCCCceEEE
Q 012057 309 SLGAHYSQACVSNITVRNAIIRESDNGLRIKTWQGGTGCVSDLSFENIQMENVR-NCINIDQYYCLSKECLNQTSAVFVT 387 (472)
Q Consensus 309 s~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~v~-~~i~I~~~~~~~~~~~~~~~~~~i~ 387 (472)
|++.+ +.+.++||+|+||++.++.+|++||+|.++.|.|+||+|+||+|+++. +||.|++.|+....+..+.+.+.|+
T Consensus 229 S~G~~-~~~~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~~~~~p~~~~~i~ 307 (362)
T 1czf_A 229 SVGDR-SNNVVKNVTIEHSTVSNSENAVRIKTISGATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPTNGVTIQ 307 (362)
T ss_dssp EECSS-SCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEECSCCCSSEEEE
T ss_pred ecccc-CCCCEEEEEEEeeEEECCceEEEEEEeCCCCceEeeEEEEeEEEECcccccEEEEEecCCCCCCCCCCCCceEE
Confidence 98765 568999999999999999999999999998999999999999999997 6999999998754444445679999
Q ss_pred eEEEEeEEEEeeCCCCceEEecCCCCceeeEEEEEEEEEcCCCCccCCceeeccee
Q 012057 388 GITYRNIKGTYDVRTPPIHFACSDTVPCTKITMAEVELLPYEGQLLDDPFCWNAYG 443 (472)
Q Consensus 388 nI~f~nI~~t~~~~~~~~~i~~~~~~~~~~i~~~ni~~~~~~~~~~~~~~c~~~~g 443 (472)
||+|+||+++......++.+.|+ ..+|+||+|+||++++.. ....|+|++.
T Consensus 308 nI~~~ni~gt~~~~~~~i~i~c~-~~~c~ni~~~nv~i~~~~----~~~~C~n~~~ 358 (362)
T 1czf_A 308 DVKLESVTGSVDSGATEIYLLCG-SGSCSDWTWDDVKVTGGK----KSTACKNFPS 358 (362)
T ss_dssp EEEEEEEEEEECTTSEEEEEECC-TTTEEEEEEEEEEEESSB----CCSCCBSCCT
T ss_pred EEEEEEEEEEecCCceEEEEEeC-CCcCcCEEEEeEEEEcCC----CcccCcCCCC
Confidence 99999999998642357899998 789999999999998632 2357999873
No 6
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=1.4e-54 Score=438.45 Aligned_cols=318 Identities=25% Similarity=0.410 Sum_probs=273.1
Q ss_pred chHHHHHHHHHHHhhc-CCcEEEecCCcEEEEeee-eecCCCCCceEEEeCceEeCCCCCCCCCCCCCCceEEEEEeecC
Q 012057 92 DDTAAFRAAWKAACAV-EAGVVLAPSDYVFKITST-IFSGPCKPGLVFQLDGVLMPPDGPDTWPKADSRKQWLVFYKLDD 169 (472)
Q Consensus 92 DdT~Aiq~Ai~~a~~~-~g~~V~iP~G~ty~i~~~-~l~gp~~s~v~l~~~Gtl~~~~~~~~~~~~~~~~~~i~~~~~~n 169 (472)
.||+|||+|++ ||+. ++++|+||+| +|+. + .| +++++|+++|++.+. +..|.. +|+.+.+ +|
T Consensus 6 ~dt~aiq~ai~-~c~~~~g~~v~vP~G-~~~~--l~~l----~~~~~l~~~g~~~~~--~~~w~g-----~~i~~~~-~n 69 (339)
T 2iq7_A 6 TDAAAAIKGKA-SCTSIILNGIVVPAG-TTLD--MTGL----KSGTTVTFQGKTTFG--YKEWEG-----PLISFSG-TN 69 (339)
T ss_dssp SCHHHHHHHGG-GCSEEEEESCEECTT-CCEE--ECSC----CTTCEEEEESEEEEC--CCCSCC-----CSEEEEE-ES
T ss_pred CCHHHHHHHHH-HhhccCCCeEEECCC-EEEE--eecc----CCCeEEEEeCcEEcc--cccccC-----cEEEEEc-cc
Confidence 48999999999 4554 5789999999 5653 2 23 789999999987653 355643 4677755 99
Q ss_pred cEEEee--eeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEeeeeEEEeceEEecCCCCeeeeeccccEEEEeE
Q 012057 170 MTFTGK--GTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNLVVSGLTIQNSPQFHMKFDGCEGVMIDKL 247 (472)
Q Consensus 170 vtI~G~--GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~~~ 247 (472)
|+|+|. |+|||+|+.||+... .++ ...||++|.|.+|+|++|+|++++|++.|++++..|++|+|+++
T Consensus 70 v~I~G~~gG~IdG~G~~~w~~~~-----~~~-----~~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~ 139 (339)
T 2iq7_A 70 ININGASGHSIDCQGSRWWDSKG-----SNG-----GKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDV 139 (339)
T ss_dssp CEEEECTTCEEECCGGGTCCSCG-----GGS-----SSCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESC
T ss_pred EEEEcCCCCEEECCccccccccc-----ccC-----CCCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEE
Confidence 999997 799999999997532 111 12589999999999999999999999999999999999999999
Q ss_pred EEeCCCC----CCCCCceeeecceeEEEEceEEecCCceEEeCCCceeEEEEeeeecCCCcceecccCccCCCCcEEEEE
Q 012057 248 SISSPKL----SPNTDGIHIENTKSVGIYNSMISNGDDCISIGTGCSDVDIADVTCGPSHGISIGSLGAHYSQACVSNIT 323 (472)
Q Consensus 248 ~i~~~~~----~~n~DGI~i~~s~nV~I~n~~i~~gDD~I~i~s~s~nI~I~n~~~~~~~gi~iGs~~~~~~~~~i~nI~ 323 (472)
+|.++.. ++|+|||++.+|+||+|+||+|.++||||++++ ++||+|+||+|.++|||+|||++.+ ..+.++||+
T Consensus 140 ~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghGisiGSlg~~-~~~~v~nV~ 217 (339)
T 2iq7_A 140 IIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKNQDDCLAINS-GTNITFTGGTCSGGHGLSIGSVGGR-SDNTVKTVT 217 (339)
T ss_dssp EEECGGGGGTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSCCEEEEEESSS-SCCEEEEEE
T ss_pred EEECCccccccCCCCCcEEEcCcceEEEEecEEecCCCEEEEcC-CccEEEEeEEEECCceEEECcCCcc-cCCCEEEEE
Confidence 9999743 789999999999999999999999999999999 6999999999999999999998765 568999999
Q ss_pred EEeEEEecCCceEEEEeecCCCceeeeEEEEeEEEEccCe-eEEEEeeccCCccccCCCCceEEEeEEEEeEEEEeeCCC
Q 012057 324 VRNAIIRESDNGLRIKTWQGGTGCVSDLSFENIQMENVRN-CINIDQYYCLSKECLNQTSAVFVTGITYRNIKGTYDVRT 402 (472)
Q Consensus 324 i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~v~~-~i~I~~~~~~~~~~~~~~~~~~i~nI~f~nI~~t~~~~~ 402 (472)
|+||++.++.+|++||+|.++.|.|+||+|+||+|+++.+ ||.|++.|+....+..+.+.+.|+||+|+||+++.....
T Consensus 218 v~n~~~~~~~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p~~~~~i~ni~~~ni~gt~~~~~ 297 (339)
T 2iq7_A 218 ISNSKIVNSDNGVRIKTVSGATGSVSGVTYSGITLSNIAKYGIVIEQDYENGSPTGTPTNGVPITGLTLSKITGSVASSG 297 (339)
T ss_dssp EEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCCCSSSCEEEEEEEEEEEEECTTS
T ss_pred EEeeEEECCCcEEEEEEeCCCCeEEEEEEEEeEEccCcccccEEEEeecCCCCCCCCCCCCceEEEEEEEeEEEEeCCCC
Confidence 9999999999999999999988999999999999999986 999999998754444455678999999999999986533
Q ss_pred CceEEecCCCCceeeEEEEEEEEEcCCCCccCCceeecce
Q 012057 403 PPIHFACSDTVPCTKITMAEVELLPYEGQLLDDPFCWNAY 442 (472)
Q Consensus 403 ~~~~i~~~~~~~~~~i~~~ni~~~~~~~~~~~~~~c~~~~ 442 (472)
.++.+.|+ ..+|+||+|+||+++... ....|+|+.
T Consensus 298 ~~~~i~c~-~~~c~ni~~~nv~i~~~~----~~~~C~n~~ 332 (339)
T 2iq7_A 298 TNVYILCA-SGACSNWKWSGVSVTGGK----KSTKCSNIP 332 (339)
T ss_dssp EEEEEECC-TTCEEEEEEEEEEEESSB----CCSCCBCCC
T ss_pred EEEEEEeC-CCcEecEEEEeEEEEcCC----CcccccCCC
Confidence 57899995 889999999999998643 235799986
No 7
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=1.5e-54 Score=437.60 Aligned_cols=320 Identities=25% Similarity=0.423 Sum_probs=272.9
Q ss_pred cchHHHHHHHHHHHhhc-CCcEEEecCCcEEEEeeeeecCCCCCceEEEeCceEeCCCCCCCCCCCCCCceEEEEEeecC
Q 012057 91 ADDTAAFRAAWKAACAV-EAGVVLAPSDYVFKITSTIFSGPCKPGLVFQLDGVLMPPDGPDTWPKADSRKQWLVFYKLDD 169 (472)
Q Consensus 91 tDdT~Aiq~Ai~~a~~~-~g~~V~iP~G~ty~i~~~~l~gp~~s~v~l~~~Gtl~~~~~~~~~~~~~~~~~~i~~~~~~n 169 (472)
..||+|||+|++ ||+. ++++|+||+| +|+. + + .++++++|+++|++.+. +..|.. +|+.+. .+|
T Consensus 5 ~~~t~aiq~ai~-~c~~~gg~~v~vP~G-~~~~--l--~-~l~~~~~l~~~g~~~~~--~~~w~g-----~li~~~-~~n 69 (336)
T 1nhc_A 5 FTSASEASESIS-SCSDVVLSSIEVPAG-ETLD--L--S-DAADGSTITFEGTTSFG--YKEWKG-----PLIRFG-GKD 69 (336)
T ss_dssp ESSHHHHHHHGG-GCSEEEEESCEECTT-CCEE--C--T-TCCTTCEEEEESEEEEC--CCCSCC-----CSEECC-EES
T ss_pred ECCHHHHHHHHH-HhhccCCCeEEECCC-EEEE--e--e-ccCCCeEEEEeceEEcc--cccccC-----cEEEEe-cCC
Confidence 358999999999 4554 5689999999 5652 2 1 12789999999987652 355643 466664 599
Q ss_pred cEEEee--eeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEeeeeEEEeceEEecCCCCeeeeeccccEEEEeE
Q 012057 170 MTFTGK--GTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNLVVSGLTIQNSPQFHMKFDGCEGVMIDKL 247 (472)
Q Consensus 170 vtI~G~--GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~~~ 247 (472)
|+|+|. |+|||+|+.||+... .++. ..||++|.|..|+|++|++++++|+|.|++++. |++++|+++
T Consensus 70 v~I~G~~gG~IdG~G~~~w~~~~-----~~~~-----~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~ 138 (336)
T 1nhc_A 70 LTVTMADGAVIDGDGSRWWDSKG-----TNGG-----KTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDF 138 (336)
T ss_dssp CEEEECTTCEEECCGGGTCCSCT-----TTSS-----SCCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESC
T ss_pred EEEEcCCCeEEECCccccccccC-----cCCC-----CCCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEE
Confidence 999997 799999999997532 1211 268999999999999999999999999999999 999999999
Q ss_pred EEeCCCC----CCCCCceeeecceeEEEEceEEecCCceEEeCCCceeEEEEeeeecCCCcceecccCccCCCCcEEEEE
Q 012057 248 SISSPKL----SPNTDGIHIENTKSVGIYNSMISNGDDCISIGTGCSDVDIADVTCGPSHGISIGSLGAHYSQACVSNIT 323 (472)
Q Consensus 248 ~i~~~~~----~~n~DGI~i~~s~nV~I~n~~i~~gDD~I~i~s~s~nI~I~n~~~~~~~gi~iGs~~~~~~~~~i~nI~ 323 (472)
+|.++.. ++|+|||++.+|+||+|+||+|.++||||++++ .+||+|+||+|.++|||+|||++.+ ..+.++||+
T Consensus 139 ~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~ 216 (336)
T 1nhc_A 139 TIDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQDDCIAINS-GESISFTGGTCSGGHGLSIGSVGGR-DDNTVKNVT 216 (336)
T ss_dssp EEECTTHHHHTCCSCCSEEECSCEEEEEESCEEESSSEEEEESS-EEEEEEESCEEESSSEEEEEEESSS-SCCEEEEEE
T ss_pred EEECCCcccccCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeC-CeEEEEEeEEEECCcCceEccCccc-cCCCEEEEE
Confidence 9999753 789999999999999999999999999999999 6999999999999999999998765 568999999
Q ss_pred EEeEEEecCCceEEEEeecCCCceeeeEEEEeEEEEccCe-eEEEEeeccCCccccCCCCceEEEeEEEEeEEEEeeCCC
Q 012057 324 VRNAIIRESDNGLRIKTWQGGTGCVSDLSFENIQMENVRN-CINIDQYYCLSKECLNQTSAVFVTGITYRNIKGTYDVRT 402 (472)
Q Consensus 324 i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~v~~-~i~I~~~~~~~~~~~~~~~~~~i~nI~f~nI~~t~~~~~ 402 (472)
|+||++.++.+|++||+|.++.|.|+||+|+||+|+++++ ||.|++.|+....+..+.+.+.|+||+|+||+++.....
T Consensus 217 v~n~~~~~t~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p~~~~~i~~i~~~ni~gt~~~~~ 296 (336)
T 1nhc_A 217 ISDSTVSNSANGVRIKTIYKETGDVSEITYSNIQLSGITDYGIVIEQDYENGSPTGTPSTGIPITDVTVDGVTGTLEDDA 296 (336)
T ss_dssp EEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCCCSSSCEEEEEEEEEEEEECTTC
T ss_pred EEeeEEECCCcEEEEEEECCCCCEEeeeEEeeEEeeccccccEEEEeecCCCCCCCCCCCCceEEEEEEEeEEEEeCCCC
Confidence 9999999999999999999989999999999999999986 999999998754444455678999999999999986423
Q ss_pred CceEEecCCCCceeeEEEEEEEEEcCCCCccCCceeeccee
Q 012057 403 PPIHFACSDTVPCTKITMAEVELLPYEGQLLDDPFCWNAYG 443 (472)
Q Consensus 403 ~~~~i~~~~~~~~~~i~~~ni~~~~~~~~~~~~~~c~~~~g 443 (472)
.++.+.|+ ..+|+||+|+||+++... ....|+|+++
T Consensus 297 ~~v~i~c~-~~~c~ni~~~nv~i~~~~----~~~~C~n~~~ 332 (336)
T 1nhc_A 297 TQVYILCG-DGSCSDWTWSGVDLSGGK----TSDKCENVPS 332 (336)
T ss_dssp EEEEEECC-TTCEEEEEEEEEEEESSB----CCSCCBSCCT
T ss_pred EEEEEEcC-CCcEecEEEEeEEEEcCC----CCcccCCCCC
Confidence 47899995 889999999999999643 2357999874
No 8
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=7.3e-54 Score=434.29 Aligned_cols=321 Identities=22% Similarity=0.368 Sum_probs=273.1
Q ss_pred hHHHHHHHHHHHhhc-CCcEEEecCCcEEEEeeeeecCCCCCceEEEeCceEeCCCCCCCCCCCCCCceEEEEEeecCcE
Q 012057 93 DTAAFRAAWKAACAV-EAGVVLAPSDYVFKITSTIFSGPCKPGLVFQLDGVLMPPDGPDTWPKADSRKQWLVFYKLDDMT 171 (472)
Q Consensus 93 dT~Aiq~Ai~~a~~~-~g~~V~iP~G~ty~i~~~~l~gp~~s~v~l~~~Gtl~~~~~~~~~~~~~~~~~~i~~~~~~nvt 171 (472)
||+|||+|+++ |+. ++++|+||+| +|+. + + .++++++|+++|++.+. ...|. ..+|+.+.. +||+
T Consensus 7 ~t~aiq~ai~~-c~~~gg~~v~vP~G-~~l~--l--~-~l~~~~~l~~~g~~~~~--~~~w~----~g~~i~~~~-~ni~ 72 (349)
T 1hg8_A 7 EYSGLATAVSS-CKNIVLNGFQVPTG-KQLD--L--S-SLQNDSTVTFKGTTTFA--TTADN----DFNPIVISG-SNIT 72 (349)
T ss_dssp SGGGHHHHHHH-CSEEEECCCEECTT-CCEE--E--T-TCCTTCEEEECSEEEEC--CCCCT----TCCSEEEEE-ESCE
T ss_pred CHHHHHHHHHh-ccccCCCEEEECCC-EEEE--e--e-ccCCCeEEEEcCceecc--ccccc----CCceEEEEC-ccEE
Confidence 78999999995 554 5789999999 5663 2 1 12789999999987642 35563 236777754 9999
Q ss_pred EEe--eeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEE-E-eeeeEEEeceEEecCCCCeeeeeccccEEEEeE
Q 012057 172 FTG--KGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRF-F-MSSNLVVSGLTIQNSPQFHMKFDGCEGVMIDKL 247 (472)
Q Consensus 172 I~G--~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~-~-~~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~~~ 247 (472)
|+| .|+|||+|+.||+... .++. ...||++|.| . .|+|++|++++++|++.|++++..|++|+|+++
T Consensus 73 I~G~~~G~IdG~G~~ww~~~~-----~~~~----~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~ 143 (349)
T 1hg8_A 73 ITGASGHVIDGNGQAYWDGKG-----SNSN----SNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGL 143 (349)
T ss_dssp EEECTTCEEECCGGGTCCSCT-----TCTT----SCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEE
T ss_pred EEecCCCEEcCCcchhhhccc-----ccCC----CCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEE
Confidence 999 6999999999997532 1111 1258999999 7 788999999999999999999999999999999
Q ss_pred EEeCCC-C-----------CCCCCceeeecceeEEEEceEEecCCceEEeCCCceeEEEEeeeecCCCcceecccCccCC
Q 012057 248 SISSPK-L-----------SPNTDGIHIENTKSVGIYNSMISNGDDCISIGTGCSDVDIADVTCGPSHGISIGSLGAHYS 315 (472)
Q Consensus 248 ~i~~~~-~-----------~~n~DGI~i~~s~nV~I~n~~i~~gDD~I~i~s~s~nI~I~n~~~~~~~gi~iGs~~~~~~ 315 (472)
+|.++. . ++|+|||++.+|+||+|+||+|.++||||++++ ++||+|+||+|.++|||+|||+|.+ .
T Consensus 144 ~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~-~ 221 (349)
T 1hg8_A 144 ILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTS-GTNIVVSNMYCSGGHGLSIGSVGGK-S 221 (349)
T ss_dssp EEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESS-EEEEEEEEEEEESSCCEEEEEESSS-S
T ss_pred EEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeC-CeEEEEEeEEEeCCcceEEcccccc-c
Confidence 999853 2 589999999999999999999999999999999 6999999999999999999999766 5
Q ss_pred CCcEEEEEEEeEEEecCCceEEEEeecCCCceeeeEEEEeEEEEccC-eeEEEEeeccCCccccCCCCceEEEeEEEEeE
Q 012057 316 QACVSNITVRNAIIRESDNGLRIKTWQGGTGCVSDLSFENIQMENVR-NCINIDQYYCLSKECLNQTSAVFVTGITYRNI 394 (472)
Q Consensus 316 ~~~i~nI~i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~v~-~~i~I~~~~~~~~~~~~~~~~~~i~nI~f~nI 394 (472)
.+.++||+|+||+|.++.+|++||+|.++.|.|+||+|+||+|+++. +||.|++.|+....+..+.+.+.|+||+|+||
T Consensus 222 ~~~v~nV~v~n~~~~~~~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~~~~~~p~~~~~i~~I~~~ni 301 (349)
T 1hg8_A 222 DNVVDGVQFLSSQVVNSQNGCRIKSNSGATGTINNVTYQNIALTNISTYGVDVQQDYLNGGPTGKPTNGVKISNIKFIKV 301 (349)
T ss_dssp CCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEEECSSSBCSCCCSSEEEEEEEEEEE
T ss_pred cCCEEEEEEEEEEEECCCcEEEEEecCCCCccccceEEEEEEEEccccccEEEEeeccCCCCCCcccCCceEEEEEEEeE
Confidence 68999999999999999999999999998899999999999999997 69999999988655555556799999999999
Q ss_pred EEEeeCCCCceEEecCCCCceeeEEEEEEEEEcCCCCccCCceeeccee
Q 012057 395 KGTYDVRTPPIHFACSDTVPCTKITMAEVELLPYEGQLLDDPFCWNAYG 443 (472)
Q Consensus 395 ~~t~~~~~~~~~i~~~~~~~~~~i~~~ni~~~~~~~~~~~~~~c~~~~g 443 (472)
+++......++.+.|+ ..+|+||+|+||++++... ...|+|+..
T Consensus 302 ~gt~~~~~~~v~i~c~-~~~c~ni~~~nv~i~~~~~----~~~C~n~~~ 345 (349)
T 1hg8_A 302 TGTVASSAQDWFILCG-DGSCSGFTFSGNAITGGGK----TSSCNYPTN 345 (349)
T ss_dssp EEEECTTSEEEEEECC-SSCEEEEEEESCEEECCSS----CCEECSSSS
T ss_pred EEEeCCCCEEEEEEeC-CCcCcCEEEEeEEEEcCCC----CeeeeCCCC
Confidence 9988642357899998 6899999999999996432 358999875
No 9
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=1.9e-53 Score=429.91 Aligned_cols=317 Identities=26% Similarity=0.418 Sum_probs=269.7
Q ss_pred hHHHHHHHHHHHhhc-CCcEEEecCCcEEEEeeeeecCCCCCceEEEeCceEeCCCCCCCCCCCCCCceEEEEEeecCcE
Q 012057 93 DTAAFRAAWKAACAV-EAGVVLAPSDYVFKITSTIFSGPCKPGLVFQLDGVLMPPDGPDTWPKADSRKQWLVFYKLDDMT 171 (472)
Q Consensus 93 dT~Aiq~Ai~~a~~~-~g~~V~iP~G~ty~i~~~~l~gp~~s~v~l~~~Gtl~~~~~~~~~~~~~~~~~~i~~~~~~nvt 171 (472)
-++|||+|++ ||+. ++++|+||+| +|+. + + .++++++|+++|++.+. +..|.. +|+.+.. +||+
T Consensus 11 g~~aiq~ai~-~c~~~gg~~v~vP~G-~~l~--l--~-~l~~~~~l~~~g~~~~~--~~~w~g-----~li~~~~-~nv~ 75 (339)
T 1ia5_A 11 GASSASKSKT-SCSTIVLSNVAVPSG-TTLD--L--T-KLNDGTHVIFSGETTFG--YKEWSG-----PLISVSG-SDLT 75 (339)
T ss_dssp HHHHHHHHGG-GCSEEEEESCEECTT-CCEE--E--C-SCCTTCEEEEESEEEEC--CCCSCC-----CSEEEEE-ESCE
T ss_pred chHHHHHHHH-HhhccCCCeEEECCC-EEEE--e--e-ccCCCeEEEEeCcEEcc--cccccC-----cEEEEEc-CcEE
Confidence 4689999999 4554 4789999999 5652 2 1 12789999999987652 355642 5777755 9999
Q ss_pred EEee--eeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEeeeeEEEeceEEecCCCCeeeeeccccEEEEeEEE
Q 012057 172 FTGK--GTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNLVVSGLTIQNSPQFHMKFDGCEGVMIDKLSI 249 (472)
Q Consensus 172 I~G~--GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~~~~i 249 (472)
|+|. |+|||+|+.||+... .++ ...||++|+|..|+|++|++++++|++.|++++..|++|+|++++|
T Consensus 76 I~G~~gG~IdG~G~~~w~~~~-----~~~-----~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I 145 (339)
T 1ia5_A 76 ITGASGHSINGDGSRWWDGEG-----GNG-----GKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITI 145 (339)
T ss_dssp EEECTTCEEECCGGGTCSSCT-----TTS-----SSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCEE
T ss_pred EEcCCCeEEeCCCCccccccc-----cCC-----CCCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEEE
Confidence 9997 799999999997532 111 1268999999999999999999999999999999999999999999
Q ss_pred eCCCC----CCCCCceeeecceeEEEEceEEecCCceEEeCCCceeEEEEeeeecCCCcceecccCccCCCCcEEEEEEE
Q 012057 250 SSPKL----SPNTDGIHIENTKSVGIYNSMISNGDDCISIGTGCSDVDIADVTCGPSHGISIGSLGAHYSQACVSNITVR 325 (472)
Q Consensus 250 ~~~~~----~~n~DGI~i~~s~nV~I~n~~i~~gDD~I~i~s~s~nI~I~n~~~~~~~gi~iGs~~~~~~~~~i~nI~i~ 325 (472)
.++.. ++|+|||++.+|++|+|+||+|.++||||++++ ++||+|+||+|.++|||+|||++.+ ..+.++||+|+
T Consensus 146 ~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~ 223 (339)
T 1ia5_A 146 DNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNS-GENIYFSGGYCSGGHGLSIGSVGGR-SDNTVKNVTFV 223 (339)
T ss_dssp ECGGGTTTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSSCEEEEEECSS-SCCEEEEEEEE
T ss_pred ECCccccccCCCCCcEEecCCceEEEEeeEEEcCCCeEEEeC-CeEEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEE
Confidence 98642 689999999999999999999999999999999 6999999999999999999998765 56899999999
Q ss_pred eEEEecCCceEEEEeecCCCceeeeEEEEeEEEEccCe-eEEEEeeccCCccccCCCCceEEEeEEEEeEEEEeeCCCCc
Q 012057 326 NAIIRESDNGLRIKTWQGGTGCVSDLSFENIQMENVRN-CINIDQYYCLSKECLNQTSAVFVTGITYRNIKGTYDVRTPP 404 (472)
Q Consensus 326 n~~i~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~v~~-~i~I~~~~~~~~~~~~~~~~~~i~nI~f~nI~~t~~~~~~~ 404 (472)
||++.++.+|++||+|.++.|.|+||+|+||+|+++.+ ||.|+++|.. .+..+.+.+.|+||+|+||+++......+
T Consensus 224 n~~~~~t~~girIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~--~~~~p~~~~~i~ni~~~ni~gt~~~~~~~ 301 (339)
T 1ia5_A 224 DSTIINSDNGVRIKTNIDTTGSVSDVTYKDITLTSIAKYGIVVQQNYGD--TSSTPTTGVPITDFVLDNVHGSVVSSGTN 301 (339)
T ss_dssp EEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEETC--TTSCCCSSSCEEEEEEEEEEEEECTTSEE
T ss_pred eeEEECCCcEEEEEEeCCCCcEEEeeEEEEEEEECcccccEEEEccCCC--CCCCCcCCceEEEEEEEeEEEEeCCCCEE
Confidence 99999999999999999988999999999999999986 9999999932 34444567899999999999998642357
Q ss_pred eEEecCCCCceeeEEEEEEEEEcCCCCccCCceeeccee
Q 012057 405 IHFACSDTVPCTKITMAEVELLPYEGQLLDDPFCWNAYG 443 (472)
Q Consensus 405 ~~i~~~~~~~~~~i~~~ni~~~~~~~~~~~~~~c~~~~g 443 (472)
+.+.|+ ..+|+||+|+||++++.. ....|+|+..
T Consensus 302 v~i~c~-~~~c~ni~~~nv~i~~~~----~~~~C~n~~~ 335 (339)
T 1ia5_A 302 ILISCG-SGSCSDWTWTDVSVSGGK----TSSKCTNVPS 335 (339)
T ss_dssp EEEECC-TTCEEEEEEEEEEEESSB----CCSCCBSCCT
T ss_pred EEEEeC-CCCEecEEEEeEEEECCC----CCeeeECCCC
Confidence 899995 889999999999998643 2357999873
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=1.1e-53 Score=430.23 Aligned_cols=312 Identities=19% Similarity=0.276 Sum_probs=265.0
Q ss_pred HHHHHHHHHHHhhc-CCcEEEecCCcEEEEeeeeecCCCCCceEEEeCceEeCCCCCCCCCCCCCCceEEEEEeecCcEE
Q 012057 94 TAAFRAAWKAACAV-EAGVVLAPSDYVFKITSTIFSGPCKPGLVFQLDGVLMPPDGPDTWPKADSRKQWLVFYKLDDMTF 172 (472)
Q Consensus 94 T~Aiq~Ai~~a~~~-~g~~V~iP~G~ty~i~~~~l~gp~~s~v~l~~~Gtl~~~~~~~~~~~~~~~~~~i~~~~~~nvtI 172 (472)
++|||+ ++ ||+. ++++|+||+| +|+ .+. |+++++|+++|++.+. ...|.. +|+.+. .+||+|
T Consensus 8 ~~aiq~-i~-aC~~~gg~~v~vP~G-~~l--~l~----l~~~~~l~~~g~~~~~--~~~w~~-----~~i~~~-~~ni~I 70 (335)
T 1k5c_A 8 VDDAKD-IA-GCSAVTLNGFTVPAG-NTL--VLN----PDKGATVTMAGDITFA--KTTLDG-----PLFTID-GTGINF 70 (335)
T ss_dssp TTGGGG-CT-TCSEEEECCEEECTT-CCE--EEC----CCTTCEEEECSCEEEC--CCCSCS-----CSEEEE-EEEEEE
T ss_pred HHHhHH-HH-hcccCCCCEEEECCC-EEE--EEE----eCCCeEEEEeccEecc--cccccC-----cEEEEE-ccCEEE
Confidence 689999 87 6765 4789999999 565 233 3899999999988753 355653 578776 599999
Q ss_pred Ee-eeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEeeeeEEEeceEEecCCCCeeeeecccc-EEEEeEEEe
Q 012057 173 TG-KGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNLVVSGLTIQNSPQFHMKFDGCEG-VMIDKLSIS 250 (472)
Q Consensus 173 ~G-~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~n-v~I~~~~i~ 250 (472)
+| .|+|||+|+.||+... .++ ...||++|+|..|+ ++|+||+++|++.|++++..|++ |+|++++|.
T Consensus 71 ~G~~G~idG~G~~ww~~~~-----~~~-----~~~rP~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~ 139 (335)
T 1k5c_A 71 VGADHIFDGNGALYWDGKG-----TNN-----GTHKPHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVD 139 (335)
T ss_dssp ECTTCEEECCGGGTCCSCT-----TTS-----SSCCCCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEE
T ss_pred EeCccEEcCChhHhhhccc-----ccC-----CCCCCeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEE
Confidence 99 5999999999997532 121 12689999999999 99999999999999999999999 999999999
Q ss_pred CCCC-----CCCCCceeeecceeEEEEceEEecCCceEEeCCCceeEEEEeeeecCCCcceecccCccCCCCcEEEEEEE
Q 012057 251 SPKL-----SPNTDGIHIENTKSVGIYNSMISNGDDCISIGTGCSDVDIADVTCGPSHGISIGSLGAHYSQACVSNITVR 325 (472)
Q Consensus 251 ~~~~-----~~n~DGI~i~~s~nV~I~n~~i~~gDD~I~i~s~s~nI~I~n~~~~~~~gi~iGs~~~~~~~~~i~nI~i~ 325 (472)
++.. ++|+|||++ +|+||+|+||+|+++||||++++ .+||+|+||+|.++|||+|||++. .+.++||+|+
T Consensus 140 ~~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisIGS~g~---~~~v~nV~v~ 214 (335)
T 1k5c_A 140 DFAGDTKNLGHNTDGFDV-SANNVTIQNCIVKNQDDCIAIND-GNNIRFENNQCSGGHGISIGSIAT---GKHVSNVVIK 214 (335)
T ss_dssp CGGGGGGGCCCSCCSEEE-ECSSEEEESCEEESSSCSEEEEE-EEEEEEESCEEESSCCEEEEEECT---TCEEEEEEEE
T ss_pred CCCCcccccCCCCCeEcc-cCCeEEEEeeEEEcCCCEEEeeC-CeeEEEEEEEEECCccCeEeeccC---CCCEEEEEEE
Confidence 9742 789999999 99999999999999999999999 599999999999999999999963 5799999999
Q ss_pred eEEEecCCceEEEEeecCCC-ceeeeEEEEeEEEEccC-eeEEEEeeccCCccccCCCCceEEEeEEEEeEE--EEeeCC
Q 012057 326 NAIIRESDNGLRIKTWQGGT-GCVSDLSFENIQMENVR-NCINIDQYYCLSKECLNQTSAVFVTGITYRNIK--GTYDVR 401 (472)
Q Consensus 326 n~~i~~~~~gi~I~~~~g~~-g~v~nI~f~Ni~~~~v~-~~i~I~~~~~~~~~~~~~~~~~~i~nI~f~nI~--~t~~~~ 401 (472)
||++.++.+|+|||+|.++. |.|+||+|+||+|+++. +||.|++.|.. .+..+.+.+.|+||+|+||+ ++....
T Consensus 215 n~~~~~t~~girIKt~~g~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~--~~~~p~~~~~i~nI~~~nI~~~Gt~~~~ 292 (335)
T 1k5c_A 215 GNTVTRSMYGVRIKAQRTATSASVSGVTYDANTISGIAKYGVLISQSYPD--DVGNPGTGAPFSDVNFTGGATTIKVNNA 292 (335)
T ss_dssp SCEEEEEEEEEEEEEETTCCSCEEEEEEEESCEEEEEEEEEEEEEEEETS--SSSSCCSSSCEEEEEECSSCEEEEECTT
T ss_pred eeEEECCCceEEEEEeCCCCcceEeeeEEEEEEEEccccccEEEEeeCCC--CCCCCCCCceEEEEEEEEEEEeeEEcCC
Confidence 99999999999999999988 99999999999999997 69999999942 33334457899999999999 766532
Q ss_pred CCceEEecCCCCceeeEEEEEEEEEcCCCCccCCceeecceeee
Q 012057 402 TPPIHFACSDTVPCTKITMAEVELLPYEGQLLDDPFCWNAYGTQ 445 (472)
Q Consensus 402 ~~~~~i~~~~~~~~~~i~~~ni~~~~~~~~~~~~~~c~~~~g~~ 445 (472)
..++.+.|++ +|+||+|+||++++.... ...|.+++...
T Consensus 293 ~~~i~i~c~~--~c~ni~~~nv~i~~~~~~---~~~~~~~~~~g 331 (335)
T 1k5c_A 293 ATRVTVECGN--CSGNWNWSQLTVTGGKAG---TIKSDKAKITG 331 (335)
T ss_dssp CEEEEEECSS--EESEEEEEEEEEESSBCC---CEECTTCEEEE
T ss_pred ceEEEEECCC--cCCCEEEEeEEEEcCCCC---ceEeEEeEeeC
Confidence 3578999986 999999999999986543 34666665543
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=6.2e-48 Score=404.62 Aligned_cols=297 Identities=14% Similarity=0.105 Sum_probs=246.6
Q ss_pred CceEEeeeecccCCCCcchHHHHHHHHHHHhhcCCcEEEecCCcEEEE------------eeeeecCCCCCceEEEeCce
Q 012057 75 DCIFDVRDYGAVGDGSADDTAAFRAAWKAACAVEAGVVLAPSDYVFKI------------TSTIFSGPCKPGLVFQLDGV 142 (472)
Q Consensus 75 ~~~~~V~dfGA~gDG~tDdT~Aiq~Ai~~a~~~~g~~V~iP~G~ty~i------------~~~~l~gp~~s~v~l~~~Gt 142 (472)
..+|||++|||+|| ||+|||+||+++++.++++|+||+|++|++ +.+.| +++++|+++|+
T Consensus 49 ~~~~nV~dfGA~gD----dT~AIqkAIdaCs~~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~L----kSnVtL~LdGt 120 (600)
T 2x6w_A 49 DPSGNVIQPGPNVD----SRQYLQAAIDYVSSNGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQL----RSNVNLNIEGR 120 (600)
T ss_dssp CTTSCBCCCCTTCC----CHHHHHHHHHHHHHTTCEEEEECTTCEEEECSCCCGGGGGGTEEEEC----CTTEEEEECSE
T ss_pred CcEEeeecCCCCcc----CHHHHHHHHHHhhhcCCCEEEECCCCEEEecccccccccccccceEE----cCceEEeeecE
Confidence 45699999999999 999999999965555789999999977999 77777 89999999999
Q ss_pred EeCCCCCCCCCCC----CCCceEEEEEeecCcEEEeeeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEeeee
Q 012057 143 LMPPDGPDTWPKA----DSRKQWLVFYKLDDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSN 218 (472)
Q Consensus 143 l~~~~~~~~~~~~----~~~~~~i~~~~~~nvtI~G~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~~~n 218 (472)
|+++.++.+||.. .....+|.+.+++||+|+|.|+|||+|..||.... + ++.||+ ++|.+|+
T Consensus 121 L~as~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~GtIDGqG~~wW~~~~----------~--~~~RP~-l~f~~c~- 186 (600)
T 2x6w_A 121 IHLSPFFDLKPFQVFVGFDNGDPASSGNLENCHIYGHGVVDFGGYEFGASSQ----------L--RNGVAF-GRSYNCS- 186 (600)
T ss_dssp EEECGGGTTSCEEEEECCSSSSGGGCCCEEEEEEESSCEEECTTCCCSSTTC----------C--EEEEEC-CSEEEEE-
T ss_pred EEEcCChHHCcccccccccccceEEEecceeEEEecceeeeCCccccccccc----------c--CCCCCE-EEEeeeE-
Confidence 9999999999752 01123478889999999999999999999996321 0 124677 8899888
Q ss_pred EEEeceEEecC-CCCeeee---eccccEEEEeEE----EeCCCCCCCCCceeeecceeEEEEceEEecCCceEEe-CCCc
Q 012057 219 LVVSGLTIQNS-PQFHMKF---DGCEGVMIDKLS----ISSPKLSPNTDGIHIENTKSVGIYNSMISNGDDCISI-GTGC 289 (472)
Q Consensus 219 v~I~~v~i~ns-~~~~i~~---~~~~nv~I~~~~----i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~gDD~I~i-~s~s 289 (472)
|+||+++|+ +.|++++ ..|+||+|+|++ |.+ ++|+||| |+|+||+|.++||||++ |+++
T Consensus 187 --I~GITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDCIAI~KSGs 254 (600)
T 2x6w_A 187 --VTGITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESCYFSMSSSF 254 (600)
T ss_dssp --EESCEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESCEEECCCTT
T ss_pred --EeCeEEECCCCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcEEEEecCCC
Confidence 999999999 9999999 999999999999 776 6899999 99999999999999999 9986
Q ss_pred e-eEEEEeeeecCCC-cceecccCccCCCCcEEEEEEEeEEEecCCceEEEEeecCCCceeeeEEEEeEEEEccCeeEEE
Q 012057 290 S-DVDIADVTCGPSH-GISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKTWQGGTGCVSDLSFENIQMENVRNCINI 367 (472)
Q Consensus 290 ~-nI~I~n~~~~~~~-gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~v~~~i~I 367 (472)
. ++.++ +|..+| ||+|||++ .+.++||+|+| +||++.++.|.|+||+|+||+|+++..+|.|
T Consensus 255 ~~ni~~e--~~~~GHgGISIGSe~----~ggV~NV~V~N----------rIKt~~G~GG~V~NItfeNI~m~nV~~~I~i 318 (600)
T 2x6w_A 255 ARNIACS--VQLHQHDTFYRGSTV----NGYCRGAYVVM----------HAAEAAGAGSYAYNMQVENNIAVIYGQFVIL 318 (600)
T ss_dssp HHHHEEE--EEECSSSEEEESCEE----EEESEEEEEEE----------CGGGCTTTCSEEEEEEEESCEEEESSEEEEE
T ss_pred cCCeEEE--EEcCCCCcEEecccc----cCcEEEEEEEE----------EEEeecCCCceEEEEEEEEEEEEccceEEEe
Confidence 3 47777 577776 89999974 46788888888 6777777789999999999999999999988
Q ss_pred EeeccCCccccCCCCceEEEeEEEEeEEEEeeCCCC---c--eEEecCC-------CCceeeEEEEEEEEEcC
Q 012057 368 DQYYCLSKECLNQTSAVFVTGITYRNIKGTYDVRTP---P--IHFACSD-------TVPCTKITMAEVELLPY 428 (472)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~i~nI~f~nI~~t~~~~~~---~--~~i~~~~-------~~~~~~i~~~ni~~~~~ 428 (472)
++.+ ...+.+.|+||+|+||+++...+.+ + ..+.+.+ +.+|++|+|+|+++...
T Consensus 319 ~q~~-------~~~s~~~IsnItfkNItgTsas~aav~~~~g~~i~g~p~~~~~~~~~~Ie~V~~~~~~~~~~ 384 (600)
T 2x6w_A 319 GSDV-------TATVSGHLNDVIVSGNIVSIGERAAFSAPFGAFIDIGPDNSGASNVQDIQRVLVTGNSFYAP 384 (600)
T ss_dssp EECB-------CSSCBCEEEEEEEESCEEEECSCCTTSSSCEEEEEECCCTTCCSSSCCEEEEEEESCEEECC
T ss_pred CCCC-------CCCCCceEEEEEEEeEEEEeccccccccccceEEEecCcccccccccceeEEEEeceEEEcC
Confidence 8651 2456789999999999998753321 1 3344433 36899999999999653
No 12
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=100.00 E-value=3.3e-40 Score=350.89 Aligned_cols=305 Identities=13% Similarity=0.179 Sum_probs=237.5
Q ss_pred EEeeeecccCCCCcchHHHHHHHHHHHhh--------------------------cCCcEEEecCCcEEEE---eeeeec
Q 012057 78 FDVRDYGAVGDGSADDTAAFRAAWKAACA--------------------------VEAGVVLAPSDYVFKI---TSTIFS 128 (472)
Q Consensus 78 ~~V~dfGA~gDG~tDdT~Aiq~Ai~~a~~--------------------------~~g~~V~iP~G~ty~i---~~~~l~ 128 (472)
+|...|||++||.+|++.++. +|++++. .++++|+||+| +|++ +.+.|
T Consensus 143 ~n~~~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G-~yl~g~~G~i~l- 219 (549)
T 1x0c_A 143 FDDDLISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPG-VYYFTGHDHMVL- 219 (549)
T ss_dssp EGGGEEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSE-EEECCTTCCEEE-
T ss_pred ECCccccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCe-EEecCCceEEEe-
Confidence 445579999999999999988 5544433 24789999999 8997 46777
Q ss_pred CCCCCceE-EEeC-ce-EeCCCCCCCCCCCCCCceEEEEE-eecCcEEEeeeeeecCCCcccCCCCCCCCCCCCCCCCCC
Q 012057 129 GPCKPGLV-FQLD-GV-LMPPDGPDTWPKADSRKQWLVFY-KLDDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGP 204 (472)
Q Consensus 129 gp~~s~v~-l~~~-Gt-l~~~~~~~~~~~~~~~~~~i~~~-~~~nvtI~G~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~ 204 (472)
+++++ |+++ |. |+++ +.+. +++||+|+|.|+|||+|..||...... +....
T Consensus 220 ---~s~~~~L~l~~GA~L~gs---------------~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~~-------~~~~~ 274 (549)
T 1x0c_A 220 ---SSSVTWVYFAPGAYVKGA---------------VEFLSTASEVKASGHGVLSGEQYVWYADPDEG-------YQKAS 274 (549)
T ss_dssp ---CTTCCEEEECTTEEEESC---------------EEECCCSSEEEEESSCEEECTTSCTTEEGGGT-------TEECG
T ss_pred ---cCCCCeEecCCCCEEEEE---------------EEEecCceeEEEEeeEEEECCCceecccCccc-------ccccc
Confidence 89999 9997 54 5542 3444 789999999999999999998421100 00000
Q ss_pred CCCCeEEEE------EeeeeEEEeceEEecCCCCeeeee-cc-cc--EEEEeEEEeCCCCCCCCCceeeecceeEEEEce
Q 012057 205 CDSPALIRF------FMSSNLVVSGLTIQNSPQFHMKFD-GC-EG--VMIDKLSISSPKLSPNTDGIHIENTKSVGIYNS 274 (472)
Q Consensus 205 ~~rp~~i~~------~~~~nv~I~~v~i~ns~~~~i~~~-~~-~n--v~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~n~ 274 (472)
..||++|.| .+|+|++|+|++++|++.|++++. .| ++ |+|+++++.++. ++|+|||++. +||+|+||
T Consensus 275 ~~rp~~i~~~~~~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV~I~n~ 351 (549)
T 1x0c_A 275 GANNNGLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGTILQDV 351 (549)
T ss_dssp GGCSCCCCSEEEECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTCEEEEE
T ss_pred cCCCceEEEeeccccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCEEEEee
Confidence 136677777 999999999999999999999966 45 69 999999998853 4689999999 99999999
Q ss_pred EEecCCceEEeCCCceeEEEEeeeecC--CCc-ceecccCccCCCCcEEEEEEEeEEEecCCc------eEEEEe---e-
Q 012057 275 MISNGDDCISIGTGCSDVDIADVTCGP--SHG-ISIGSLGAHYSQACVSNITVRNAIIRESDN------GLRIKT---W- 341 (472)
Q Consensus 275 ~i~~gDD~I~i~s~s~nI~I~n~~~~~--~~g-i~iGs~~~~~~~~~i~nI~i~n~~i~~~~~------gi~I~~---~- 341 (472)
+|.++||||++++ +||+|+||+|+. +++ |+|||. .+.++||+|+||+|.++.. |..|++ |
T Consensus 352 ~i~~gDDcIaIks--~NI~I~n~~~~~~~g~~~IsiGs~-----~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~ 424 (549)
T 1x0c_A 352 FYHTDDDGLKMYY--SNVTARNIVMWKESVAPVVEFGWT-----PRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYL 424 (549)
T ss_dssp EEEESSCCEECCS--SSEEEEEEEEEECSSSCSEECCBS-----CCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTT
T ss_pred EEeCCCCEEEECC--CCEEEEeeEEEcCCCCceEEECCC-----CCcEEEEEEEeeEEECccccccccceEEEecccccc
Confidence 9999999999998 999999999976 456 999984 5789999999999998863 555776 2
Q ss_pred -c------CCCceeeeEEEEeEEEEccC-eeEEEEeeccCCccccCCCCceEEEeEEEEeEEEEeeCC----CCceEEec
Q 012057 342 -Q------GGTGCVSDLSFENIQMENVR-NCINIDQYYCLSKECLNQTSAVFVTGITYRNIKGTYDVR----TPPIHFAC 409 (472)
Q Consensus 342 -~------g~~g~v~nI~f~Ni~~~~v~-~~i~I~~~~~~~~~~~~~~~~~~i~nI~f~nI~~t~~~~----~~~~~i~~ 409 (472)
. +..|.|+||+|+||+|+++. +++.+.+.+ ......|+||+|+||+++.... ..+..+.+
T Consensus 425 ~g~~~~~~d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~--------g~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G 496 (549)
T 1x0c_A 425 YAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFR--------INPIQNLDNISIKNVSIESFEPLSINTTESWMPV 496 (549)
T ss_dssp TCTTSCCSCCCCBEEEEEEEEEEEEEEEEEEEECCSEE--------ECCSEEEEEEEEEEEEEEEECCGGGTCSCEEECC
T ss_pred cCccccCcCCCceEccEEEEeEEEEeEEEeceEEeeec--------CCCCCcCccEEEEEEEEEccccccccccceEEeC
Confidence 1 12679999999999999997 666554432 2234579999999999776531 22333443
Q ss_pred CC------CCceeeEEEEEEEEEcC
Q 012057 410 SD------TVPCTKITMAEVELLPY 428 (472)
Q Consensus 410 ~~------~~~~~~i~~~ni~~~~~ 428 (472)
.+ ..+|+||+|+||++..+
T Consensus 497 ~~~~~~~~~~~v~nI~f~NV~i~G~ 521 (549)
T 1x0c_A 497 WYDLNNGKQITVTDFSIEGFTVGNT 521 (549)
T ss_dssp CBBTTTCCBCCEEEEEEEEEEETTE
T ss_pred CCccccccceeeeeEEEEeEEEeCe
Confidence 22 27899999999999764
No 13
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=100.00 E-value=1.3e-39 Score=338.86 Aligned_cols=292 Identities=14% Similarity=0.163 Sum_probs=214.2
Q ss_pred CCceEE-eeeecccCCCCcchHHHHHHHHHHHhhc-CCcEEEecCCcEEEEeeeeecCCCCCceEEEeC--ceEeCCCC-
Q 012057 74 TDCIFD-VRDYGAVGDGSADDTAAFRAAWKAACAV-EAGVVLAPSDYVFKITSTIFSGPCKPGLVFQLD--GVLMPPDG- 148 (472)
Q Consensus 74 ~~~~~~-V~dfGA~gDG~tDdT~Aiq~Ai~~a~~~-~g~~V~iP~G~ty~i~~~~l~gp~~s~v~l~~~--Gtl~~~~~- 148 (472)
+...|+ |++|||+|||.+|||+|||+||+++++. ++++|+||+| +|+++++.| +++++|+++ ++|+++.+
T Consensus 18 ~~~~~~~V~dfGA~gDG~tDdT~Aiq~Aidac~~~~ggg~V~vP~G-tYl~g~I~l----ks~v~L~l~~GatL~~s~~t 92 (464)
T 1h80_A 18 QDVNYDLVDDFGANGNDTSDDSNALQRAINAISRKPNGGTLLIPNG-TYHFLGIQM----KSNVHIRVESDVIIKPTWNG 92 (464)
T ss_dssp CSEEEEHHHHHCCCTTSSSBCHHHHHHHHHHHHTSTTCEEEEECSS-EEEECSEEC----CTTEEEEECTTCEEEECCCT
T ss_pred CcceeeehhccCcCCCCCchhHHHHHHHHHHHhhccCCcEEEECCC-eEEEeeEec----cCceEEEEcCCcEEEeccCC
Confidence 356788 9999999999999999999999865455 6899999999 899999988 889999998 47887763
Q ss_pred -CCCCCCCCCCceEEEE---EeecCcEEEeee---eeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEeeeeEEE
Q 012057 149 -PDTWPKADSRKQWLVF---YKLDDMTFTGKG---TIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNLVV 221 (472)
Q Consensus 149 -~~~~~~~~~~~~~i~~---~~~~nvtI~G~G---tIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~~~nv~I 221 (472)
...|+ ++.+ .+++|++|+|.| +|||+|... .+|+++.|.+|+|++|
T Consensus 93 d~~~y~-------~~~~~~~~~~~nItI~G~Gg~~~iDG~G~~~--------------------~rp~~i~~~~~~Nv~I 145 (464)
T 1h80_A 93 DGKNHR-------LFEVGVNNIVRNFSFQGLGNGFLVDFKDSRD--------------------KNLAVFKLGDVRNYKI 145 (464)
T ss_dssp TCSCEE-------EEEESSSSCEEEEEEEECTTCEEEECTTCSC--------------------CBEEEEEECSEEEEEE
T ss_pred CcccCC-------ceEeecccCccceEEECcCcceEEeCCCCCC--------------------CCceEEEEEeeccEEE
Confidence 33333 2333 678999999998 888877531 4788999999999999
Q ss_pred eceEEecCCCCeeeeeccccEEEEeEEEeCCCCCCCCCceeeecceeEEEEceEEecCCceEE--eCCCceeEEEEeeee
Q 012057 222 SGLTIQNSPQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYNSMISNGDDCIS--IGTGCSDVDIADVTC 299 (472)
Q Consensus 222 ~~v~i~ns~~~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~gDD~I~--i~s~s~nI~I~n~~~ 299 (472)
++++++| .|.++ .|.+|.+ . |+|||++ .|+||+|+||.|.++||++. ...+++||+|+||+|
T Consensus 146 ~gIti~n--~w~ih--~s~~V~i-----~------NtDGi~i-~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~ 209 (464)
T 1h80_A 146 SNFTIDD--NKTIF--ASILVDV-----T------ERNGRLH-WSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHS 209 (464)
T ss_dssp EEEEEEC--CSCBS--CSEEECE-----E------EETTEEE-EEEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEE
T ss_pred eeeEEec--cceEe--eceeeee-----e------cCCCcee-eccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEE
Confidence 9999999 45433 4433322 1 5799998 89999999999999999774 233489999999999
Q ss_pred cCCCcceecccC----ccCCCCcEEEEEEEeEEEecCCceEEEEeecCCCceeeeEEEEeEEEEccCeeEEEEeeccCCc
Q 012057 300 GPSHGISIGSLG----AHYSQACVSNITVRNAIIRESDNGLRIKTWQGGTGCVSDLSFENIQMENVRNCINIDQYYCLSK 375 (472)
Q Consensus 300 ~~~~gi~iGs~~----~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~v~~~i~I~~~~~~~~ 375 (472)
.+++||+|.+.. . ...+.++||+|+||+|.+..++|+|+++ .+.++||+|+||+++++.++|.|++.|+..-
T Consensus 210 ~gg~GIrIktg~d~IG~-~~~g~v~NI~~~Ni~~~nv~~~I~I~p~---~~~isnItfeNI~~t~~~~aI~i~q~y~~~f 285 (464)
T 1h80_A 210 EGGIALRMETDNLLMKN-YKQGGIRNIFADNIRCSKGLAAVMFGPH---FMKNGDVQVTNVSSVSCGSAVRSDSGFVELF 285 (464)
T ss_dssp ESSEEEEEECCCHHHHH-HTCCEEEEEEEEEEEEESSSEEEEEECT---TCBCCCEEEEEEEEESSSCSEEECCCCCEEC
T ss_pred ECCCEEEEEeCCceecc-CCCCcEEEEEEEeEEEECCceeEEEeCC---CceEeEEEEEEEEEEccceeEEEecCccccc
Confidence 997788886530 1 1457899999999999999999999853 2478999999999999999999999888542
Q ss_pred cccCCCCceEEEeEEEEeEE------EEee--------CCCCceEEecCCCCceeeEEEEEE
Q 012057 376 ECLNQTSAVFVTGITYRNIK------GTYD--------VRTPPIHFACSDTVPCTKITMAEV 423 (472)
Q Consensus 376 ~~~~~~~~~~i~nI~f~nI~------~t~~--------~~~~~~~i~~~~~~~~~~i~~~ni 423 (472)
....-...+.+|.|-. ++.. ....++++.|. .+|.|++..++
T Consensus 286 ----d~~~~~~~~~~~~~~~e~~~~~G~~~~~~~~~ng~~~~~~~i~~~--~~~~~~~~~~~ 341 (464)
T 1h80_A 286 ----SPTDEVHTRQSWKQAVESKLGRGCAQTPYARGNGGTRWAARVTQK--DACLDKAKLEY 341 (464)
T ss_dssp ----C---------------------CCBCCC----------CEEBCSC--HHHHHHHHHHT
T ss_pred ----CccccccccceeccccccccccCceeEEEeccCCcccCceEEccc--cceeccccccc
Confidence 1111256677776555 2210 11357777775 34445544444
No 14
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=100.00 E-value=9.4e-38 Score=329.21 Aligned_cols=269 Identities=17% Similarity=0.174 Sum_probs=203.3
Q ss_pred CceEEeeeecccCCCCcchHHHHHHHHHHHhhcCCcEEEecCCcEEEE-eeeeecCCCCCceEEEeCc----eEeCCCCC
Q 012057 75 DCIFDVRDYGAVGDGSADDTAAFRAAWKAACAVEAGVVLAPSDYVFKI-TSTIFSGPCKPGLVFQLDG----VLMPPDGP 149 (472)
Q Consensus 75 ~~~~~V~dfGA~gDG~tDdT~Aiq~Ai~~a~~~~g~~V~iP~G~ty~i-~~~~l~gp~~s~v~l~~~G----tl~~~~~~ 149 (472)
+.++||+||||+|||+||||+|||+||++ |++|+||+| +|++ +++.| +++++|.+++ +|+++++.
T Consensus 20 ~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~-----Gg~V~iP~G-tYlis~~l~l----~snv~L~g~g~~~t~L~~~~~~ 89 (609)
T 3gq8_A 20 QFGVSVKTYGAKGDGVTDDIRAFEKAIES-----GFPVYVPYG-TFMVSRGIKL----PSNTVLTGAGKRNAVIRFMDSV 89 (609)
T ss_dssp SSSEEGGGGTCCCEEEEECHHHHHHHHHT-----SSCEEECSE-EEEESSCEEE----CSSEEEEESCTTTEEEEECTTC
T ss_pred CcEEEeEecccCCCCCchhHHHHHHHHHc-----CCEEEECCc-cEEEeCceEE----CCCcEEEEeeCCCCEEEeCCCC
Confidence 45699999999999999999999999994 489999999 8999 88888 7899999986 56665443
Q ss_pred CCCCCCCCCceEEEEEeecCcEEEeeeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEeeeeEEEeceEEecC
Q 012057 150 DTWPKADSRKQWLVFYKLDDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNLVVSGLTIQNS 229 (472)
Q Consensus 150 ~~~~~~~~~~~~i~~~~~~nvtI~G~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~~~nv~I~~v~i~ns 229 (472)
..|.. ....|+.+.+.+||+|+|. +|||+++.||.. .+ .. ...||.+|.|..|+|++|++++++|+
T Consensus 90 p~~~~--li~~lI~a~~~~NItItG~-TIDGNG~~~g~~-~~----~~------g~~RP~lI~f~~c~NV~I~gVti~NS 155 (609)
T 3gq8_A 90 GRGES--LMYNENVTTGNENIFLSSF-TLDGNNKRLGQG-IS----GI------GGSRESNLSIRACHNVYIRDIEAVDC 155 (609)
T ss_dssp CSSCC--SEEESCTTTCCEEEEEEEE-EEECCGGGGCSS-CC----CS------STTTTCSEEEESCEEEEEEEEEEESC
T ss_pred CCCCc--eeeeeeeecccccEEEEee-EEECCccccCcc-cc----cC------CCCCccEEEEEeeceEEEEeeEEEeC
Confidence 32211 1123345668999999995 999999844431 11 01 12589999999999999999999999
Q ss_pred CCCeeeeeccccEEEEeEEEeCCCCCCCCCceeeec------ceeEEEEceEEe-cCCceEEeCCCceeEEEEeeeecC-
Q 012057 230 PQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIEN------TKSVGIYNSMIS-NGDDCISIGTGCSDVDIADVTCGP- 301 (472)
Q Consensus 230 ~~~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~------s~nV~I~n~~i~-~gDD~I~i~s~s~nI~I~n~~~~~- 301 (472)
+.+++.+ .++.. | ||+++++ |+||+|+||+|+ ++||||++++ ++||+|+||+|++
T Consensus 156 p~~gI~I-------------~~~~~--N-DGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIks-seNI~I~Nc~~~gp 218 (609)
T 3gq8_A 156 TLHGIDI-------------TCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDP 218 (609)
T ss_dssp SSCSEEE-------------ECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECC
T ss_pred CCCCeEE-------------eCCCC--C-ccccCCCccccccceeEEEEeeEEEecCCCEEEecC-CeeEEEEeEEEECC
Confidence 9855443 33322 2 6666665 999999999995 5999999987 9999999999953
Q ss_pred -----CCcceecccCccCCCCcEEEEEEEeEEEecCCceEEEEeecCCCceeeeEEEEe-EEEEccC-eeEEEEeeccCC
Q 012057 302 -----SHGISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKTWQGGTGCVSDLSFEN-IQMENVR-NCINIDQYYCLS 374 (472)
Q Consensus 302 -----~~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~N-i~~~~v~-~~i~I~~~~~~~ 374 (472)
++||+||+. .+||+|+||++.++.+|++||++. ..+.++||+++| +.++++. +.+.....+...
T Consensus 219 ~G~S~~~GIsIGsg--------s~NVtV~Nc~i~nt~~GIrIKt~~-~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~ 289 (609)
T 3gq8_A 219 RLTANCNGFEIDDG--------SRHVVLSNNRSKGCYGGIEIKAHG-DAPAAYNISINGHMSVEDVRSYNFRHIGHHAAT 289 (609)
T ss_dssp SSCSSCCSEEECTT--------CEEEEEESEEEESSSEEEEEEECT-TSCCCEEEEEEEEEEESCSEEEEEEETTSCSTT
T ss_pred CCCCCcccEEccCC--------cccEEEEeeEEECCCCEEEEEecC-CCCccccEEEECCEeecCceEecceEEccccCC
Confidence 368999742 399999999999999999999864 447899999998 5666654 345444333221
Q ss_pred ccccCCCCceEEEeEEEEeEEEEe
Q 012057 375 KECLNQTSAVFVTGITYRNIKGTY 398 (472)
Q Consensus 375 ~~~~~~~~~~~i~nI~f~nI~~t~ 398 (472)
.+......||+++|+....
T Consensus 290 -----dp~s~~a~nV~l~n~~~~~ 308 (609)
T 3gq8_A 290 -----APQSVSAKNIVASNLVSIR 308 (609)
T ss_dssp -----SCCCSSCEEEEEEEEEEES
T ss_pred -----CCCcceecceEeecceEEe
Confidence 1223355777777777554
No 15
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=100.00 E-value=3.6e-37 Score=327.33 Aligned_cols=273 Identities=14% Similarity=0.145 Sum_probs=212.4
Q ss_pred cCCcEEEecCCcEEEEeeeeecCCC---------CCceE-EEeC-ce-EeCCCCCCCCCCCCCCceEEEEEeecCcEEEe
Q 012057 107 VEAGVVLAPSDYVFKITSTIFSGPC---------KPGLV-FQLD-GV-LMPPDGPDTWPKADSRKQWLVFYKLDDMTFTG 174 (472)
Q Consensus 107 ~~g~~V~iP~G~ty~i~~~~l~gp~---------~s~v~-l~~~-Gt-l~~~~~~~~~~~~~~~~~~i~~~~~~nvtI~G 174 (472)
.++++||||+| +|+++...+.||| +++++ |+++ |. |++ ++.+.+++||+|+|
T Consensus 229 ~ggg~v~vP~G-~yl~~~~~~~gpc~~g~G~i~lkSnvt~L~L~~GA~l~g---------------~i~~~~~~nv~ItG 292 (574)
T 1ogo_X 229 GAKSILYFPPG-VYWMNQDQSGNSGKLGSNHIRLNSNTYWVYLAPGAYVKG---------------AIEYFTKQNFYATG 292 (574)
T ss_dssp CSSSEEEECSE-EEEECBCTTCCBSCSSSCCEECCTTCCEEEECTTEEEES---------------CEEECCSSCEEEES
T ss_pred CCCCEEEECCc-EEEEeccccCCcccccceEEEecCCCceEEecCCcEEEc---------------cEEEeCceeEEEEe
Confidence 46889999999 8999555555544 55665 6665 42 332 37788999999999
Q ss_pred eeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEE------eeeeEEEeceEEecCCCCeeeeeccccE--EEEe
Q 012057 175 KGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFF------MSSNLVVSGLTIQNSPQFHMKFDGCEGV--MIDK 246 (472)
Q Consensus 175 ~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~------~~~nv~I~~v~i~ns~~~~i~~~~~~nv--~I~~ 246 (472)
.|+|||+|..||........ . ...||.+++|. +|+|++|+|++++|++.|++++..|++| +|++
T Consensus 293 ~GtIDG~G~~ww~~~~~~~~-----~---~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~n 364 (574)
T 1ogo_X 293 HGILSGENYVYQANAGDNYI-----A---VKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISD 364 (574)
T ss_dssp SCEEECTTSCTTCBTTTTTB-----S---CCCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCEEEEEEE
T ss_pred CEEEeCCCcccccccccccc-----c---ccCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCChhhEEEe
Confidence 99999999999964221100 0 11477788887 9999999999999999999999999999 9999
Q ss_pred EEEeCCCCCCCCCceeeecceeEEEEceEEecCCceEEeCCCceeEEEEeeeecCC--Cc-ceecccCccCCCCcEEEEE
Q 012057 247 LSISSPKLSPNTDGIHIENTKSVGIYNSMISNGDDCISIGTGCSDVDIADVTCGPS--HG-ISIGSLGAHYSQACVSNIT 323 (472)
Q Consensus 247 ~~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~gDD~I~i~s~s~nI~I~n~~~~~~--~g-i~iGs~~~~~~~~~i~nI~ 323 (472)
+++.++. ..++|||++. +||+|+||+|.++||||++++ +||+|+||+|+.+ ++ |+|||. .+.++||+
T Consensus 365 v~i~~~~-~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks--~NI~I~nc~i~~g~g~g~IsIGS~-----~g~V~NV~ 434 (574)
T 1ogo_X 365 YKQVGAF-FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY--SGASVSRATIWKCHNDPIIQMGWT-----SRDISGVT 434 (574)
T ss_dssp EEEECCC-STTCCCCBCC--TTCEEEEEEEEESSCSEECCS--TTCEEEEEEEEECSSSCSEECCSS-----CCCEEEEE
T ss_pred eEeeCCC-CCCCccCccc--CCEEEEeeEEECCCCEEEECC--ccEEEEeEEEECCCCCceEEEcCC-----CCcEEEEE
Confidence 9998743 3469999999 999999999999999999998 9999999998764 56 999983 57999999
Q ss_pred EEeEEEecCCc--------eEEEEee---------cCCCceeeeEEEEeEEEEccCeeEEEEeeccCCccccCCCCceEE
Q 012057 324 VRNAIIRESDN--------GLRIKTW---------QGGTGCVSDLSFENIQMENVRNCINIDQYYCLSKECLNQTSAVFV 386 (472)
Q Consensus 324 i~n~~i~~~~~--------gi~I~~~---------~g~~g~v~nI~f~Ni~~~~v~~~i~I~~~~~~~~~~~~~~~~~~i 386 (472)
|+||+|.++.. +..|.+. ..+.| | ||+|+||+|+++.+++ |... ....|
T Consensus 435 v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~g-V-NI~f~NI~~~~v~~~i-i~i~-----------p~~~I 500 (574)
T 1ogo_X 435 IDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSRKS-I-SMTVSNVVCEGLCPSL-FRIT-----------PLQNY 500 (574)
T ss_dssp EEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEE-E-EEEEEEEEECSSBCEE-EEEC-----------CSEEE
T ss_pred EEeEEEECCcccceeccccceeeccccccccccccCCCce-E-EEEEEeEEEEceeEee-EEEC-----------CCCCE
Confidence 99999988754 3332211 12234 8 9999999999999885 4431 24589
Q ss_pred EeEEEEeEEEEee-----CCCCceEEecCCCCceeeEEEEEEEEEcC
Q 012057 387 TGITYRNIKGTYD-----VRTPPIHFACSDTVPCTKITMAEVELLPY 428 (472)
Q Consensus 387 ~nI~f~nI~~t~~-----~~~~~~~i~~~~~~~~~~i~~~ni~~~~~ 428 (472)
+||+|+||+++.. ....+..+.+.+ .+|+||+|+||++...
T Consensus 501 ~nI~~~NI~i~g~~~~~~~~~~~~~i~G~~-~~v~nI~~~NV~i~g~ 546 (574)
T 1ogo_X 501 KNFVVKNVAFPDGLQTNSIGTGESIIPAAS-GLTMGLAISAWTIGGQ 546 (574)
T ss_dssp EEEEEEEEEETTCBCCSTTCTTCEEECCCT-TCCEEEEEEEEEETTE
T ss_pred EEEEEEeEEEeCccccccccccceeEecCC-CccceEEEEeEEEeCE
Confidence 9999999996541 111233455556 8999999999999664
No 16
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=100.00 E-value=2.1e-37 Score=331.07 Aligned_cols=269 Identities=17% Similarity=0.192 Sum_probs=202.0
Q ss_pred CceEEeeeecccCCCCcchHHHHHHHHHHHhhcCCcEEEecCCcEEEE-eeeeecCCCCCceEEEeCc----eEeCCCCC
Q 012057 75 DCIFDVRDYGAVGDGSADDTAAFRAAWKAACAVEAGVVLAPSDYVFKI-TSTIFSGPCKPGLVFQLDG----VLMPPDGP 149 (472)
Q Consensus 75 ~~~~~V~dfGA~gDG~tDdT~Aiq~Ai~~a~~~~g~~V~iP~G~ty~i-~~~~l~gp~~s~v~l~~~G----tl~~~~~~ 149 (472)
+.++||++|||+|||+||||+|||+||++ |++|+||+| +|++ +++.| +++++|.++| +|+++++.
T Consensus 20 ~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a-----Gg~V~IPaG-tYlisg~I~L----~snv~L~Geg~~~t~Lk~~~d~ 89 (772)
T 3gqn_A 20 QFGVSVKTYGAKGDGVTDDIRAFEKAIES-----GFPVYVPYG-TFMVSRGIKL----PSNTVLTGAGKRNAVIRFMDSV 89 (772)
T ss_dssp SSSEESGGGTCCCEEEEECHHHHHHHHHT-----TSCEEECSE-EEEESSCEEE----CSSCEEEEEEEEEEEEEECTTC
T ss_pred CcEEEeEecccCCCCChhHHHHHHHHHHc-----CCEEEECCc-cEEEEeEEEE----CCCcEEEEecCCCCEEEeCCCC
Confidence 45699999999999999999999999994 389999999 8999 88888 7899999986 46665543
Q ss_pred CCCCCCCCCceEEEEEeecCcEEEeeeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEeeeeEEEeceEEecC
Q 012057 150 DTWPKADSRKQWLVFYKLDDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNLVVSGLTIQNS 229 (472)
Q Consensus 150 ~~~~~~~~~~~~i~~~~~~nvtI~G~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~~~nv~I~~v~i~ns 229 (472)
..|.. ...+|+.+.+++||+|+|. +|||+++.||.. .+ ..+ ..||.+|.|.+|+|++|++++++|+
T Consensus 90 p~~~~--li~~lI~a~gveNItItG~-TIDGNG~~~g~~-~~----~~g------~~RP~lI~f~~ckNV~I~gVti~NS 155 (772)
T 3gqn_A 90 GRGES--LMYNENVTTGNENIFLSSF-TLDGNNKRLGQG-IS----GIG------GSRESNLSIRACHNVYIRDIEAVDC 155 (772)
T ss_dssp CSSCC--SEEESCTTTCCEEEEEEEE-EEECCGGGGCSS-CC----CSS------TTTTCSEEEESCEEEEEEEEEEESC
T ss_pred CCCCc--eeeeeeeccCceeEEEEee-EEeCCccccCcc-cc----cCC------CCCccEEEEEeeceEEEEeEEEEeC
Confidence 32211 1123445678999999995 999999844321 10 011 2589999999999999999999999
Q ss_pred CCCeeeeeccccEEEEeEEEeCCCCCCCCCceeeec------ceeEEEEceEEec-CCceEEeCCCceeEEEEeeeecC-
Q 012057 230 PQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIEN------TKSVGIYNSMISN-GDDCISIGTGCSDVDIADVTCGP- 301 (472)
Q Consensus 230 ~~~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~------s~nV~I~n~~i~~-gDD~I~i~s~s~nI~I~n~~~~~- 301 (472)
+.+++. |.++.. | ||+++++ |+||+|+||.|++ +||||++++ ++||+|+||+|++
T Consensus 156 p~~gI~-------------I~np~~--N-DGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIks-SeNI~I~Nc~c~gp 218 (772)
T 3gqn_A 156 TLHGID-------------ITCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDP 218 (772)
T ss_dssp SSCSEE-------------EECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECC
T ss_pred CCCCEE-------------EeCCCc--C-CcCCCcCcccccccceEEEEeeEEEecCcCeEEecC-CceEEEEeEEEECC
Confidence 985443 444332 2 6666665 9999999999955 999999987 9999999999944
Q ss_pred -----CCcceecccCccCCCCcEEEEEEEeEEEecCCceEEEEeecCCCceeeeEEEEe-EEEEccC-eeEEEEeeccCC
Q 012057 302 -----SHGISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKTWQGGTGCVSDLSFEN-IQMENVR-NCINIDQYYCLS 374 (472)
Q Consensus 302 -----~~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~N-i~~~~v~-~~i~I~~~~~~~ 374 (472)
++||+||+. .+||+|+||++.++.+||+||++. +.+.++||.+.| +.++++. +.+.....+...
T Consensus 219 hG~S~~~GIsIGsg--------s~NVtV~Nc~~~nT~nGIRIKt~~-~gg~v~NV~I~gnis~~dvrsynir~iG~h~a~ 289 (772)
T 3gqn_A 219 RLTANCNGFEIDDG--------SRHVVLSNNRSKGCYGGIEIKAHG-DAPAAYNISINGHMSVEDVRSYNFRHIGHHAAT 289 (772)
T ss_dssp SSSSSCCSEEECTT--------CEEEEEEEEEEESSSEEEEECCCT-TSCCCEEEEEEEEEEESCSEEEEECCTTSCSSS
T ss_pred CCCCCcccEEecCC--------cccEEEEceEEECCCcEEEEEEeC-CCCccccEEEECCEEeccCeEecceEEccccCC
Confidence 378999752 399999999999999999999864 457899999985 8887754 244333322211
Q ss_pred ccccCCCCceEEEeEEEEeEEEEe
Q 012057 375 KECLNQTSAVFVTGITYRNIKGTY 398 (472)
Q Consensus 375 ~~~~~~~~~~~i~nI~f~nI~~t~ 398 (472)
.+......||+++|+....
T Consensus 290 -----dp~s~~a~nV~l~n~~~~~ 308 (772)
T 3gqn_A 290 -----APQSVSAKNIVASNLVSIR 308 (772)
T ss_dssp -----SCCCSSCEEEEEEEEEEES
T ss_pred -----CCCCccCccEEeecceEEc
Confidence 1122255777777776543
No 17
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.97 E-value=6.8e-32 Score=269.66 Aligned_cols=212 Identities=17% Similarity=0.196 Sum_probs=161.6
Q ss_pred CceEEeeeecccCCCCcchHHHHHHHHHHHhhc-CCcEEEecCCc---EEEEe-eeeecCCCCCceEEEeCc--eEeCCC
Q 012057 75 DCIFDVRDYGAVGDGSADDTAAFRAAWKAACAV-EAGVVLAPSDY---VFKIT-STIFSGPCKPGLVFQLDG--VLMPPD 147 (472)
Q Consensus 75 ~~~~~V~dfGA~gDG~tDdT~Aiq~Ai~~a~~~-~g~~V~iP~G~---ty~i~-~~~l~gp~~s~v~l~~~G--tl~~~~ 147 (472)
+..+||+||||+|||+||||+|||+||++||+. +|++|+||+|. +|+++ .+.| +++++|.+++ +|+.+.
T Consensus 49 s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~GGGtVyVPaG~~~~tYlvt~tI~L----kSnV~L~Ge~~AtIl~s~ 124 (514)
T 2vbk_A 49 KEAISILDFGVIDDGVTDNYQAIQNAIDAVASLPSGGELFIPASNQAVGYIVGSTLLI----PGGVNIRGVGKASQLRAK 124 (514)
T ss_dssp TTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTSTTCEEEECCCCSSTTCEEESSCEEE----CTTEEEECCSTTSEEEEC
T ss_pred CcEEEeeccCcCCCCCcccHHHHHHHHHHHhhcCCCeEEEECCCCcceeEEECCeEEe----cCCeEEEEecCceEeecc
Confidence 467999999999999999999999999998887 68999999994 68886 4556 8899999884 443221
Q ss_pred CC--CCCCCCCCCceEEEEEeecCcEEEeeeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEeeeeEEEeceE
Q 012057 148 GP--DTWPKADSRKQWLVFYKLDDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNLVVSGLT 225 (472)
Q Consensus 148 ~~--~~~~~~~~~~~~i~~~~~~nvtI~G~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~~~nv~I~~v~ 225 (472)
.. ..+... ...+|+.+.+++||+|+|.|+|||++..|+.... . .|+ ...+.++++.|++++
T Consensus 125 ~~I~GtIia~-~y~s~I~~~~VeNIaITG~GTIDG~g~n~t~e~~---------~-----~Rq--~~~~~fdnV~Vn~Vt 187 (514)
T 2vbk_A 125 SGLTGSVLRL-SYDSDTIGRYLRNIRVTGNNTCNGIDTNITAEDS---------V-----IRQ--VYGWVFDNVMVNEVE 187 (514)
T ss_dssp TTCCSEEEEE-CCCSCCSCEEEESCEEECCSSSEEEEESCCTTCS---------S-----CCC--EESEEEESCEEEEEE
T ss_pred ccccccEEec-cCCccccccCceEEEEECCCeEeCCCCCccccce---------e-----eec--cceEEeeeEEEEeEE
Confidence 10 000000 1234567888999999999999998765522100 0 121 222346799999996
Q ss_pred E--ecCCCCeeeeeccccEEEE-eEEEeCCCCCCCCCceeeecceeEEEEceEEecCCceEEeCCC-----------cee
Q 012057 226 I--QNSPQFHMKFDGCEGVMID-KLSISSPKLSPNTDGIHIENTKSVGIYNSMISNGDDCISIGTG-----------CSD 291 (472)
Q Consensus 226 i--~ns~~~~i~~~~~~nv~I~-~~~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~gDD~I~i~s~-----------s~n 291 (472)
. .+++.|++++..|++++++ +++|. ++|+||+|.||.|..|||||++++| ++|
T Consensus 188 ~~v~~Sg~WTIhPi~Cqnvt~r~gL~f~-------------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~ 254 (514)
T 2vbk_A 188 TAYLMQGLWHSKFIACQAGTCRVGLHFL-------------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEA 254 (514)
T ss_dssp EEEEEESEEEEEEESCEEEEEEEEEEEE-------------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSC
T ss_pred EeEeccCcEEEeEeccCceecccCcccc-------------CCCCeEEEeccEEecCcceeeeecCceecccccCCcchh
Confidence 5 4788999999999999987 55553 3799999999999999999999985 445
Q ss_pred EEEEeeeecCCCc-ceeccc-CccCCCCcEEE-EEEEeEEEecCC
Q 012057 292 VDIADVTCGPSHG-ISIGSL-GAHYSQACVSN-ITVRNAIIRESD 333 (472)
Q Consensus 292 I~I~n~~~~~~~g-i~iGs~-~~~~~~~~i~n-I~i~n~~i~~~~ 333 (472)
|. || +.|||+ | .++++| |+|++|.+.+++
T Consensus 255 ~~---------hgav~igSE~m----~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 255 VR---------SEAIILDSETM----CIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp BC---------CEEEEEESSEE----EESCSEEEEESCCEEEEEE
T ss_pred cc---------cccEEECchhh----cccccccEEEEeeeccCCc
Confidence 44 65 999999 5 468899 999999999874
No 18
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.97 E-value=2.9e-29 Score=256.96 Aligned_cols=192 Identities=19% Similarity=0.320 Sum_probs=137.8
Q ss_pred eEEeeeecccCCCCcchHHHHHHHHHHHhhcCCcEEEecCCcEEEEe--------eeeecCCCCCceEEEeCc---e-Ee
Q 012057 77 IFDVRDYGAVGDGSADDTAAFRAAWKAACAVEAGVVLAPSDYVFKIT--------STIFSGPCKPGLVFQLDG---V-LM 144 (472)
Q Consensus 77 ~~~V~dfGA~gDG~tDdT~Aiq~Ai~~a~~~~g~~V~iP~G~ty~i~--------~~~l~gp~~s~v~l~~~G---t-l~ 144 (472)
+|||++|||+|||++|||+|||+||++|++.++++|+||+| +|++. .+.+ +++++|+++| + |+
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~~gg~~v~~p~G-~y~~~~~~~~~~g~l~~----~~~v~l~g~g~~~t~l~ 76 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYAAGGGTVYLPAG-EYRVSAAGEPGDGCLML----KDGVYLAGAGMGETVIK 76 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHHTTSEEEEECSE-EEEECCCSSGGGCSEEC----CTTEEEEESSBTTEEEE
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHhcCCCEEEECCe-EEEEcccccCCcccEEe----cCCeEEEEcCCCCcEEE
Confidence 68999999999999999999999999888778899999999 89995 4656 8999999985 4 55
Q ss_pred CCCCCCCCCCC----CCCceEEEEEeecCcEEEee-----eeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEe
Q 012057 145 PPDGPDTWPKA----DSRKQWLVFYKLDDMTFTGK-----GTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFM 215 (472)
Q Consensus 145 ~~~~~~~~~~~----~~~~~~i~~~~~~nvtI~G~-----GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~ 215 (472)
..++...++.. ..... ..+.+++|++|.|. |++|| ||...+. ..+..
T Consensus 77 ~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~I~G~~~~~~G~idG----w~~~~~~-------------------~~~~~ 132 (377)
T 2pyg_A 77 LIDGSDQKITGMVRSAYGEE-TSNFGMRDLTLDGNRDNTSGKVDG----WFNGYIP-------------------GGDGA 132 (377)
T ss_dssp ECTTCBSCEEEEEECCTTSC-CEEEEEEEEEEECCGGGCBSCEEE----EEECSCT-------------------TSSCC
T ss_pred ecCCCccCccceEeccCCCc-ceEEEEEEEEEECCCccCCccccc----eecccCc-------------------ccccc
Confidence 55544433210 00111 13457899999997 88887 8864211 01246
Q ss_pred eeeEEEeceEEecCCCCeeeeeccc-cEEEEeEEEeCCCCCCCCCceeeecceeEEEEce-EEecCCceEEeCCCceeEE
Q 012057 216 SSNLVVSGLTIQNSPQFHMKFDGCE-GVMIDKLSISSPKLSPNTDGIHIENTKSVGIYNS-MISNGDDCISIGTGCSDVD 293 (472)
Q Consensus 216 ~~nv~I~~v~i~ns~~~~i~~~~~~-nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~n~-~i~~gDD~I~i~s~s~nI~ 293 (472)
|++++|+++++++++.|++++..|. +++++|+.+.. ...|||.+..|++++|++| .+...+|||.+..++++++
T Consensus 133 ~~nv~I~~~~i~n~~~~gi~~~~~~~~~~i~n~~~~~----~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~ 208 (377)
T 2pyg_A 133 DRDVTIERVEVREMSGYGFDPHEQTINLTIRDSVAHD----NGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFV 208 (377)
T ss_dssp EEEEEEEEEEEECCSSCSEEECSSEEEEEEESCEEES----CSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEE
T ss_pred ccceEEEeEEEEecccceEEeecccCCeEEEeEEeec----CCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeE
Confidence 8999999999999999999998876 67888877754 2346666666666666666 3334555665554455666
Q ss_pred EEeeeecC
Q 012057 294 IADVTCGP 301 (472)
Q Consensus 294 I~n~~~~~ 301 (472)
|+||++..
T Consensus 209 I~nN~i~~ 216 (377)
T 2pyg_A 209 MTNNVAYG 216 (377)
T ss_dssp EESCEEES
T ss_pred EECCEEEC
Confidence 66666554
No 19
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.93 E-value=2.2e-24 Score=224.45 Aligned_cols=225 Identities=13% Similarity=0.229 Sum_probs=180.9
Q ss_pred CceEEEEEeecCcEEEeeeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEeeeeEEEeceEEecC--CCCeee
Q 012057 158 RKQWLVFYKLDDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNLVVSGLTIQNS--PQFHMK 235 (472)
Q Consensus 158 ~~~~i~~~~~~nvtI~G~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~~~nv~I~~v~i~ns--~~~~i~ 235 (472)
+..++.|.+++|++|+|...++. ..| .+++..|+|++|++++|.+. ...+|+
T Consensus 189 RP~~i~~~~~~nv~i~giti~ns---p~~-----------------------~i~~~~~~nv~i~~v~I~~~~~NtDGid 242 (448)
T 3jur_A 189 RPSFVQFYRCRNVLVEGVKIINS---PMW-----------------------CIHPVLSENVIIRNIEISSTGPNNDGID 242 (448)
T ss_dssp CCCSEEEESCEEEEEESCEEESC---SSC-----------------------SEEEESCEEEEEESCEEEECSTTCCSBC
T ss_pred CceEEEEEcccceEEEeeEEEeC---CCc-----------------------eEeeeccCCEEEEeEEEeeccCCCcccc
Confidence 45679999999999999555442 222 48899999999999999985 234599
Q ss_pred eeccccEEEEeEEEeCCCCCCCCCceeeec------------ceeEEEEceEE--ecCCceEEeCCC----ceeEEEEee
Q 012057 236 FDGCEGVMIDKLSISSPKLSPNTDGIHIEN------------TKSVGIYNSMI--SNGDDCISIGTG----CSDVDIADV 297 (472)
Q Consensus 236 ~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~------------s~nV~I~n~~i--~~gDD~I~i~s~----s~nI~I~n~ 297 (472)
+..|+||+|+|++|.+. .|+|.+.+ |+||+|+||.+ ..+++||++++. .+||+|+||
T Consensus 243 i~~s~nV~I~n~~i~~g-----DDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~ 317 (448)
T 3jur_A 243 PESCKYMLIEKCRFDTG-----DDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNN 317 (448)
T ss_dssp CBSCEEEEEESCEEEES-----SEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESC
T ss_pred ccCCcCEEEEeeEEEeC-----CCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEE
Confidence 99999999999999983 47777763 79999999999 456679999885 499999999
Q ss_pred eecCC-CcceecccCccCCCCcEEEEEEEeEEEecCCceE-EEEeecC-----CCceeeeEEEEeEEEEccCeeEEEEee
Q 012057 298 TCGPS-HGISIGSLGAHYSQACVSNITVRNAIIRESDNGL-RIKTWQG-----GTGCVSDLSFENIQMENVRNCINIDQY 370 (472)
Q Consensus 298 ~~~~~-~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi-~I~~~~g-----~~g~v~nI~f~Ni~~~~v~~~i~I~~~ 370 (472)
+|.++ +|++|++... +.+.++||+|+|++|.+..+++ .|..... ..+.|+||+|+||++++...++.|...
T Consensus 318 ~~~~t~~GirIKt~~g--~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~~~~~~i~nI~~~NI~~t~~~~~i~i~g~ 395 (448)
T 3jur_A 318 VYMNVERALRLKTNSR--RGGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGL 395 (448)
T ss_dssp EEESCSEEEEEECCTT--TCSEEEEEEEESCEEEEESSEEEEEESCGGGCCCSCCCEEEEEEEESCEEEECSEEEEEECB
T ss_pred EEecccceEEEEEEcC--CCceEeeEEEEEEEEECCccccEEEEeeccCCCCCCCceEEEEEEEeEEEEecceEEEEEeC
Confidence 99885 7999998643 3589999999999999998887 8876422 346899999999999988888888632
Q ss_pred ccCCccccCCCCceEEEeEEEEeEEEEeeCCCCceEEec----CCCCceeeEEEEEEEEEcC
Q 012057 371 YCLSKECLNQTSAVFVTGITYRNIKGTYDVRTPPIHFAC----SDTVPCTKITMAEVELLPY 428 (472)
Q Consensus 371 ~~~~~~~~~~~~~~~i~nI~f~nI~~t~~~~~~~~~i~~----~~~~~~~~i~~~ni~~~~~ 428 (472)
+..+++||+|+||+++.... +..+.. ...+.++|++|+||++.++
T Consensus 396 -----------~~~p~~~I~~~nv~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~nv~ing~ 444 (448)
T 3jur_A 396 -----------ENDYVKDILISDTIIEGAKI--SVLLEFGQLGMENVIMNGSRFEKLYIEGK 444 (448)
T ss_dssp -----------TTBCEEEEEEEEEEEESCSE--EEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred -----------CCCCEeeEEEEEEEEEcccc--ceeEeccccccccceecccEEEEEEEcCE
Confidence 34589999999999987532 344432 2345689999999999864
No 20
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.90 E-value=1.1e-22 Score=217.83 Aligned_cols=264 Identities=16% Similarity=0.198 Sum_probs=190.9
Q ss_pred CCceEEeeeecccCCCCcchHHHHHHHHHHHhhcCC---------cEEEecCCcEEEEe-eeeecCCCCCceEEEeCc--
Q 012057 74 TDCIFDVRDYGAVGDGSADDTAAFRAAWKAACAVEA---------GVVLAPSDYVFKIT-STIFSGPCKPGLVFQLDG-- 141 (472)
Q Consensus 74 ~~~~~~V~dfGA~gDG~tDdT~Aiq~Ai~~a~~~~g---------~~V~iP~G~ty~i~-~~~l~gp~~s~v~l~~~G-- 141 (472)
....+||+||||+|||+||||+|||+||++|.+.++ ++||||+| +|+++ .+.+ +++++|.+++
T Consensus 46 y~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P~G-tYlvs~tI~l----~~~t~L~G~~~~ 120 (758)
T 3eqn_A 46 YPVFRNVKNYGAKGDGNTDDTAAIQAAINAGGRCGQGCDSTTTQPALVYFPPG-TYKVSSPLVV----LYQTQLIGDAKN 120 (758)
T ss_dssp CCSEEEGGGGTCCCEEEEECHHHHHHHHHTTSCSCTTCCCCSSSCEEEEECSS-EEEESSCEEC----CTTEEEEECSSS
T ss_pred CeEEEEHHHcCcCCCCCchhHHHHHHHHHHhhhcccccccccccceEEEECCc-eEEEcccEEc----cCCeEEEecCCC
Confidence 456789999999999999999999999996533332 59999999 89987 4666 8899999985
Q ss_pred --eEeCCCCCCCCCCCCCCceEEEEEeecCcEEEeeeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEeeeeE
Q 012057 142 --VLMPPDGPDTWPKADSRKQWLVFYKLDDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNL 219 (472)
Q Consensus 142 --tl~~~~~~~~~~~~~~~~~~i~~~~~~nvtI~G~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~~~nv 219 (472)
+|++..+.. + .. .|.+ ...+++|..||.. ....+...+|+
T Consensus 121 ~pvIka~~~F~---------------G-~~-li~~-d~y~~~G~~w~~~--------------------~~~F~r~irNl 162 (758)
T 3eqn_A 121 LPTLLAAPNFS---------------G-IA-LIDA-DPYLAGGAQYYVN--------------------QNNFFRSVRNF 162 (758)
T ss_dssp CCEEEECTTCC---------------S-SC-SEES-SCBCGGGCBSSCG--------------------GGCCCEEEEEE
T ss_pred CCeEecCCCCC---------------C-cc-eeec-cccCCCCcccccc--------------------ccceeeeecce
Confidence 566543321 0 01 1333 3345667778742 12345567788
Q ss_pred EEeceEEecCCCCeeeeeccccEEEEeEEEeCCCCC-CCCCceeeecceeEEEEceEEecCCceEEeCCCceeEEEEeee
Q 012057 220 VVSGLTIQNSPQFHMKFDGCEGVMIDKLSISSPKLS-PNTDGIHIENTKSVGIYNSMISNGDDCISIGTGCSDVDIADVT 298 (472)
Q Consensus 220 ~I~~v~i~ns~~~~i~~~~~~nv~I~~~~i~~~~~~-~n~DGI~i~~s~nV~I~n~~i~~gDD~I~i~s~s~nI~I~n~~ 298 (472)
+|+ ++..+....+|++..|++..|+||.|..+... ...+||+++++..+.|+|+.|..|+-++.++. +..+++|.+
T Consensus 163 viD-~t~~~~~~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~gn--QQfT~rnlt 239 (758)
T 3eqn_A 163 VID-LRQVSGSATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFGN--QQFTVRNLT 239 (758)
T ss_dssp EEE-CTTCSSCEEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCSEEEEEEC--SCCEEEEEE
T ss_pred EEe-ccccCCCceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCceEEEcCC--cceEEeccE
Confidence 888 66666667789999999999999999987554 34899999998899999999999999998865 677777777
Q ss_pred ecCC-CcceecccCccCCCCcEEEEEEEeEEEecCCceEEEEeecC---CCceeeeEEEEeEEEEccCeeEEEEeeccCC
Q 012057 299 CGPS-HGISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKTWQG---GTGCVSDLSFENIQMENVRNCINIDQYYCLS 374 (472)
Q Consensus 299 ~~~~-~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~~g---~~g~v~nI~f~Ni~~~~v~~~i~I~~~~~~~ 374 (472)
|.+. .+|.+-- . -..++++++|.++..||.+..-.. ....|-.|++.|.+++++..+|.. .+...
T Consensus 240 F~~~~taI~~~w-~--------wgwt~~~~~i~nc~vGi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~~~~i~t--~~~~~ 308 (758)
T 3eqn_A 240 FNNANTAINAIW-N--------WGWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQTFVRW--SGASS 308 (758)
T ss_dssp EESCSEEEEEEE-B--------SCEEEEEEEEESCSEEEEECCCCSSTTSCCCBCEEEEEEEEEESCSEEEEE--SSCCC
T ss_pred EeChHHHHhhhc-C--------ceEEEEEeEEECCCccEEEcCCCCCcccCcceeeEEEEEeeEEcccceEEe--ccCCC
Confidence 7764 3555521 1 246688888888888998865211 123577899999999998755543 22211
Q ss_pred ccccCCCCceEEEeEEEEeEEEE
Q 012057 375 KECLNQTSAVFVTGITYRNIKGT 397 (472)
Q Consensus 375 ~~~~~~~~~~~i~nI~f~nI~~t 397 (472)
. .......++||.|+|+...
T Consensus 309 ~---~~~~slvleNv~~~nv~~~ 328 (758)
T 3eqn_A 309 G---HLQGSLVLNNIQLTNVPVA 328 (758)
T ss_dssp S---SCSSEEEEEEEEEEEEEEE
T ss_pred C---CCcceEEEEeEEeeCCCeE
Confidence 1 1234578888888887543
No 21
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.89 E-value=1.2e-21 Score=211.57 Aligned_cols=246 Identities=14% Similarity=0.153 Sum_probs=191.4
Q ss_pred CceEEEEEeecCcEEEeeeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEeeeeEEEeceEEecC--C-CCee
Q 012057 158 RKQWLVFYKLDDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNLVVSGLTIQNS--P-QFHM 234 (472)
Q Consensus 158 ~~~~i~~~~~~nvtI~G~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~~~nv~I~~v~i~ns--~-~~~i 234 (472)
+..+|.|.+++|++|+|....+. .+| .+.+..|+|++|+++++... + ..+|
T Consensus 330 rP~~i~~~~~~nv~I~giti~ns---~~~-----------------------~i~~~~~~nv~i~~v~i~~~~~~NtDGi 383 (608)
T 2uvf_A 330 RSSLMTLRGVENVYLAGFTVRNP---AFH-----------------------GIMNLENHNVVANGLIHQTYDANNGDGI 383 (608)
T ss_dssp SCCSEEEESEEEEEEESCEEECC---SSC-----------------------SEEEESCEEEEEESCEEECTTCTTCCSE
T ss_pred CCeEEEEEeeeeEEEeCcEEecC---CCC-----------------------EEEEecCCCEEEeeEEEcCCCCCCCCeE
Confidence 45679999999999999654442 222 48999999999999998752 2 3359
Q ss_pred eeeccccEEEEeEEEeCCCC------CCCCCceeeecceeEEEEceEEecCCceEEeCCC----ceeEEEEeeeecCC-C
Q 012057 235 KFDGCEGVMIDKLSISSPKL------SPNTDGIHIENTKSVGIYNSMISNGDDCISIGTG----CSDVDIADVTCGPS-H 303 (472)
Q Consensus 235 ~~~~~~nv~I~~~~i~~~~~------~~n~DGI~i~~s~nV~I~n~~i~~gDD~I~i~s~----s~nI~I~n~~~~~~-~ 303 (472)
++..|+||+|+|++|.+.++ +.+.||++...|+||+|+||.+..++++++++++ .+||+|+||+|.++ +
T Consensus 384 di~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~~~~~t~~ 463 (608)
T 2uvf_A 384 EFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENNVMYLTDI 463 (608)
T ss_dssp EEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCTTCEEEEEEESCEEESCSE
T ss_pred EecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeEEEECCCc
Confidence 99999999999999997432 2233444444589999999999999999888874 59999999999996 7
Q ss_pred cceecccCccCCCCcEEEEEEEeEEEecC-CceEEEEeecC------------CCceeeeEEEEeEEEEccC---eeEEE
Q 012057 304 GISIGSLGAHYSQACVSNITVRNAIIRES-DNGLRIKTWQG------------GTGCVSDLSFENIQMENVR---NCINI 367 (472)
Q Consensus 304 gi~iGs~~~~~~~~~i~nI~i~n~~i~~~-~~gi~I~~~~g------------~~g~v~nI~f~Ni~~~~v~---~~i~I 367 (472)
|++|++... +++.++||+|+|++|.+. .++|.|..... ..+.+++|+|+||+++++. .++.|
T Consensus 464 GirIKt~~g--~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~i 541 (608)
T 2uvf_A 464 GLRAKSTST--IGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEI 541 (608)
T ss_dssp EEEEEEETT--TCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEEE
T ss_pred eEEEeeecC--CCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEEE
Confidence 999998532 357899999999999998 58999987542 2467999999999999876 47777
Q ss_pred EeeccCCccccCCCCceEEEeEEEEeEEEEeeCCCCceEEecCCCCceeeEEEEEEEEEcCCCCccCCceeecceeeee-
Q 012057 368 DQYYCLSKECLNQTSAVFVTGITYRNIKGTYDVRTPPIHFACSDTVPCTKITMAEVELLPYEGQLLDDPFCWNAYGTQE- 446 (472)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~i~nI~f~nI~~t~~~~~~~~~i~~~~~~~~~~i~~~ni~~~~~~~~~~~~~~c~~~~g~~~- 446 (472)
... | ....+++||+|+||+++... +..+. .|++++|+||.++...+. ..+.|.++.+...
T Consensus 542 ~g~-~--------~~~~p~~ni~~~nv~i~~~~---~~~i~-----~~~~~~~~nv~i~~~~~~--~~~~~~~v~~~~~~ 602 (608)
T 2uvf_A 542 KGD-T--------ANKAWHRLVHVNNVQLNNVT---PTAIS-----DLRDSEFNKVTFTELRGD--TPWHFSEVKNVKVD 602 (608)
T ss_dssp ECB-G--------GGTBCEEEEEEEEEEEESCC---CCEEE-----SEESCEEEEEEEESCSSS--CSCCEESCBSCCBT
T ss_pred EEE-c--------CCCCccccEEEEeEEEEccC---ceeEE-----eccCceEEeEEEeCCCCC--ccEEEEeeeceEEc
Confidence 642 2 13468999999999998753 34443 588999999999876542 2479999998765
Q ss_pred eeec
Q 012057 447 TLTI 450 (472)
Q Consensus 447 ~~~~ 450 (472)
.+++
T Consensus 603 ~v~~ 606 (608)
T 2uvf_A 603 GKPV 606 (608)
T ss_dssp TCCC
T ss_pred ceEe
Confidence 4443
No 22
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.87 E-value=4e-20 Score=186.30 Aligned_cols=214 Identities=20% Similarity=0.220 Sum_probs=166.2
Q ss_pred EEEEEeeeeEEEece---EEecC--CCC-------------eeeeeccccEEEEeEEEeCCCCCCCCCceeeecceeEEE
Q 012057 210 LIRFFMSSNLVVSGL---TIQNS--PQF-------------HMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGI 271 (472)
Q Consensus 210 ~i~~~~~~nv~I~~v---~i~ns--~~~-------------~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I 271 (472)
++.+.. +|++|.|. +|... .+| .+.+..|+|++|++++|.+++. .+|++..|++|+|
T Consensus 66 li~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~----~~i~i~~~~nv~i 140 (339)
T 1ia5_A 66 LISVSG-SDLTITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSPV----QVFSVAGSDYLTL 140 (339)
T ss_dssp SEEEEE-ESCEEEECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSS----CCEEEESCEEEEE
T ss_pred EEEEEc-CcEEEEcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCCc----ceEEEecccCeEE
Confidence 566654 99999997 66432 233 3788999999999999999754 5799999999999
Q ss_pred EceEEecC---------CceEEeCCCceeEEEEeeeecCC-CcceecccCccCCCCcEEEEEEEeEEEecCCceEEEEee
Q 012057 272 YNSMISNG---------DDCISIGTGCSDVDIADVTCGPS-HGISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKTW 341 (472)
Q Consensus 272 ~n~~i~~g---------DD~I~i~s~s~nI~I~n~~~~~~-~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~ 341 (472)
+|+.|.+. .|+|.+.+ ++||+|+||++..+ ++|+|++- +||+|+||++.+. +||.|++.
T Consensus 141 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisiGS~ 209 (339)
T 1ia5_A 141 KDITIDNSDGDDNGGHNTDAFDIGT-STYVTISGATVYNQDDCVAVNSG---------ENIYFSGGYCSGG-HGLSIGSV 209 (339)
T ss_dssp ESCEEECGGGTTTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-SCEEEEEE
T ss_pred eeEEEECCccccccCCCCCcEEecC-CceEEEEeeEEEcCCCeEEEeCC---------eEEEEEeEEEECC-ceEEECcC
Confidence 99999862 57899987 99999999999886 57999762 8999999999987 79999885
Q ss_pred cC-CCceeeeEEEEeEEEEccCeeEEEEeeccCCccccCCCCceEEEeEEEEeEEEEeeCCCCceEEec---------CC
Q 012057 342 QG-GTGCVSDLSFENIQMENVRNCINIDQYYCLSKECLNQTSAVFVTGITYRNIKGTYDVRTPPIHFAC---------SD 411 (472)
Q Consensus 342 ~g-~~g~v~nI~f~Ni~~~~v~~~i~I~~~~~~~~~~~~~~~~~~i~nI~f~nI~~t~~~~~~~~~i~~---------~~ 411 (472)
.. ..+.|+||+|+|++|.+..++++|+.+.. ..+.++||+|+||++..... .++.+.. ..
T Consensus 210 g~~~~~~v~nV~v~n~~~~~t~~girIKt~~g---------~~G~v~nI~~~ni~~~~v~~-~~i~i~~~y~~~~~~p~~ 279 (339)
T 1ia5_A 210 GGRSDNTVKNVTFVDSTIINSDNGVRIKTNID---------TTGSVSDVTYKDITLTSIAK-YGIVVQQNYGDTSSTPTT 279 (339)
T ss_dssp CSSSCCEEEEEEEEEEEEESCSEEEEEEEETT---------CCCEEEEEEEEEEEEEEESS-EEEEEEEEETCTTSCCCS
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeCC---------CCcEEEeeEEEEEEEECccc-ccEEEEccCCCCCCCCcC
Confidence 32 44789999999999999999999998632 34689999999999886422 2555542 12
Q ss_pred CCceeeEEEEEEEEEcCCCCccCCcee-----ecceeeeeeee
Q 012057 412 TVPCTKITMAEVELLPYEGQLLDDPFC-----WNAYGTQETLT 449 (472)
Q Consensus 412 ~~~~~~i~~~ni~~~~~~~~~~~~~~c-----~~~~g~~~~~~ 449 (472)
..+++||+|+||+.+...+..+..+.| .|..-....++
T Consensus 280 ~~~i~ni~~~ni~gt~~~~~~~v~i~c~~~~c~ni~~~nv~i~ 322 (339)
T 1ia5_A 280 GVPITDFVLDNVHGSVVSSGTNILISCGSGSCSDWTWTDVSVS 322 (339)
T ss_dssp SSCEEEEEEEEEEEEECTTSEEEEEECCTTCEEEEEEEEEEEE
T ss_pred CceEEEEEEEeEEEEeCCCCEEEEEEeCCCCEecEEEEeEEEE
Confidence 368999999999998876322334444 44444444444
No 23
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.87 E-value=2.3e-20 Score=189.41 Aligned_cols=213 Identities=18% Similarity=0.202 Sum_probs=164.5
Q ss_pred EEEEEeeeeEEEec---eEEecC--CCC------------eeeeeccccEEEEeEEEeCCCCCCCCCceeeecceeEEEE
Q 012057 210 LIRFFMSSNLVVSG---LTIQNS--PQF------------HMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIY 272 (472)
Q Consensus 210 ~i~~~~~~nv~I~~---v~i~ns--~~~------------~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~ 272 (472)
++.+ ..+|++|.| -+|... .+| .+.+..|+|++|+++++.+++.+ +|++. |+||+|+
T Consensus 89 ~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp~~----~i~i~-~~nv~i~ 162 (362)
T 1czf_A 89 LISM-SGEHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTPLM----AFSVQ-ANDITFT 162 (362)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCSSC----CEEEE-CSSEEEE
T ss_pred EEEE-eCccEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCCcc----EEEEe-eCCEEEE
Confidence 5666 559999999 455432 233 27899999999999999997654 59999 9999999
Q ss_pred ceEEec---------CCceEEeCCCceeEEEEeeeecCC-CcceecccCccCCCCcEEEEEEEeEEEecCCceEEEEeec
Q 012057 273 NSMISN---------GDDCISIGTGCSDVDIADVTCGPS-HGISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKTWQ 342 (472)
Q Consensus 273 n~~i~~---------gDD~I~i~s~s~nI~I~n~~~~~~-~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~~ 342 (472)
|+.|.+ ..|+|.+.+ ++||+|+||++..+ ++|+|++. +||+|+||++.+. +||.|++..
T Consensus 163 ~~~I~~~~~d~~~~~NtDGidi~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisiGS~G 231 (362)
T 1czf_A 163 DVTINNADGDTQGGHNTDAFDVGN-SVGVNIIKPWVHNQDDCLAVNSG---------ENIWFTGGTCIGG-HGLSIGSVG 231 (362)
T ss_dssp SCEEECGGGGTTTCCSCCSEEECS-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-CCEEEEEEC
T ss_pred EEEEECCccccccCCCCCceeecC-cceEEEEeeEEecCCCEEEEeCC---------eEEEEEEEEEeCC-ceeEEeecc
Confidence 999987 257899987 99999999999986 57999862 8999999999986 799999862
Q ss_pred -CCCceeeeEEEEeEEEEccCeeEEEEeeccCCccccCCCCceEEEeEEEEeEEEEeeCCCCceEEec---------C--
Q 012057 343 -GGTGCVSDLSFENIQMENVRNCINIDQYYCLSKECLNQTSAVFVTGITYRNIKGTYDVRTPPIHFAC---------S-- 410 (472)
Q Consensus 343 -g~~g~v~nI~f~Ni~~~~v~~~i~I~~~~~~~~~~~~~~~~~~i~nI~f~nI~~t~~~~~~~~~i~~---------~-- 410 (472)
...+.|+||+|+|+++.+..++++|+.+.. ..+.++||+|+||++....+ .++.+.. .
T Consensus 232 ~~~~~~v~nV~v~n~~~~~t~~GirIKt~~g---------~~G~v~nI~~~ni~~~~v~~-~~i~I~~~Y~~~~~~~~p~ 301 (362)
T 1czf_A 232 DRSNNVVKNVTIEHSTVSNSENAVRIKTISG---------ATGSVSEITYSNIVMSGISD-YGVVIQQDYEDGKPTGKPT 301 (362)
T ss_dssp SSSCCEEEEEEEEEEEEEEEEEEEEEEEETT---------CCEEEEEEEEEEEEEEEEEE-EEEEEEEEEETTEECSCCC
T ss_pred ccCCCCEEEEEEEeeEEECCceEEEEEEeCC---------CCceEeeEEEEeEEEECccc-ccEEEEEecCCCCCCCCCC
Confidence 244799999999999999999999998632 34689999999999776421 2454431 1
Q ss_pred CCCceeeEEEEEEEEEcCCCCccCCce-----eecceeeeeeee
Q 012057 411 DTVPCTKITMAEVELLPYEGQLLDDPF-----CWNAYGTQETLT 449 (472)
Q Consensus 411 ~~~~~~~i~~~ni~~~~~~~~~~~~~~-----c~~~~g~~~~~~ 449 (472)
...+++||+|+||+.+...+..+..+. |.|..-....++
T Consensus 302 ~~~~i~nI~~~ni~gt~~~~~~~i~i~c~~~~c~ni~~~nv~i~ 345 (362)
T 1czf_A 302 NGVTIQDVKLESVTGSVDSGATEIYLLCGSGSCSDWTWDDVKVT 345 (362)
T ss_dssp SSEEEEEEEEEEEEEEECTTSEEEEEECCTTTEEEEEEEEEEEE
T ss_pred CCceEEEEEEEEEEEEecCCceEEEEEeCCCcCcCEEEEeEEEE
Confidence 235799999999999887632233444 555544444444
No 24
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.87 E-value=7e-20 Score=184.61 Aligned_cols=214 Identities=21% Similarity=0.281 Sum_probs=166.2
Q ss_pred EEEEEeeeeEEEece---EEecC--CCC-------------eeeeeccccEEEEeEEEeCCCCCCCCCceeeecceeEEE
Q 012057 210 LIRFFMSSNLVVSGL---TIQNS--PQF-------------HMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGI 271 (472)
Q Consensus 210 ~i~~~~~~nv~I~~v---~i~ns--~~~-------------~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I 271 (472)
++.+.. ++++|.|. +|... .+| .+.+..|+|++|++++|.+++. .+|++..|++|+|
T Consensus 62 ~i~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp~----~~i~i~~~~nv~i 136 (339)
T 2iq7_A 62 LISFSG-TNININGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTPV----QAFSINSATTLGV 136 (339)
T ss_dssp SEEEEE-ESCEEEECTTCEEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCSS----CCEEEESCEEEEE
T ss_pred EEEEEc-ccEEEEcCCCCEEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCCc----ceEEEeccCCEEE
Confidence 566655 99999997 66432 233 3788999999999999999754 5799999999999
Q ss_pred EceEEecC---------CceEEeCCCceeEEEEeeeecCC-CcceecccCccCCCCcEEEEEEEeEEEecCCceEEEEee
Q 012057 272 YNSMISNG---------DDCISIGTGCSDVDIADVTCGPS-HGISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKTW 341 (472)
Q Consensus 272 ~n~~i~~g---------DD~I~i~s~s~nI~I~n~~~~~~-~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~ 341 (472)
+|+.|.+. .|+|.+.+ ++||+|+||++..+ ++|+|++- +||+|+||++... +||.|++.
T Consensus 137 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDciaiksg---------~nI~i~n~~~~~g-hGisiGSl 205 (339)
T 2iq7_A 137 YDVIIDNSAGDSAGGHNTDAFDVGS-STGVYISGANVKNQDDCLAINSG---------TNITFTGGTCSGG-HGLSIGSV 205 (339)
T ss_dssp ESCEEECGGGGGTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-CCEEEEEE
T ss_pred EEEEEECCccccccCCCCCcEEEcC-cceEEEEecEEecCCCEEEEcCC---------ccEEEEeEEEECC-ceEEECcC
Confidence 99999862 57899987 99999999999886 57999762 8999999999987 79999985
Q ss_pred cC-CCceeeeEEEEeEEEEccCeeEEEEeeccCCccccCCCCceEEEeEEEEeEEEEeeCCCCceEEec---------CC
Q 012057 342 QG-GTGCVSDLSFENIQMENVRNCINIDQYYCLSKECLNQTSAVFVTGITYRNIKGTYDVRTPPIHFAC---------SD 411 (472)
Q Consensus 342 ~g-~~g~v~nI~f~Ni~~~~v~~~i~I~~~~~~~~~~~~~~~~~~i~nI~f~nI~~t~~~~~~~~~i~~---------~~ 411 (472)
.. ..+.|+||+|+|+++.+..++++|+.+.. ..+.++||+|+||++..... .++.+.. .+
T Consensus 206 g~~~~~~v~nV~v~n~~~~~~~~girIkt~~g---------~~G~v~nI~~~ni~~~~v~~-~~i~i~~~y~~~~~~~~p 275 (339)
T 2iq7_A 206 GGRSDNTVKTVTISNSKIVNSDNGVRIKTVSG---------ATGSVSGVTYSGITLSNIAK-YGIVIEQDYENGSPTGTP 275 (339)
T ss_dssp SSSSCCEEEEEEEEEEEEESCSEEEEEEEETT---------CCCEEEEEEEEEEEEEEESS-EEEEEEEEEETTEECSCC
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeCC---------CCeEEEEEEEEeEEccCccc-ccEEEEeecCCCCCCCCC
Confidence 32 44789999999999999999999998632 34689999999999886432 2554431 11
Q ss_pred --CCceeeEEEEEEEEEcCCCCccCCce-----eecceeeeeeee
Q 012057 412 --TVPCTKITMAEVELLPYEGQLLDDPF-----CWNAYGTQETLT 449 (472)
Q Consensus 412 --~~~~~~i~~~ni~~~~~~~~~~~~~~-----c~~~~g~~~~~~ 449 (472)
..+++||+|+||+.+...+..+..+. |.|..-....++
T Consensus 276 ~~~~~i~ni~~~ni~gt~~~~~~~~~i~c~~~~c~ni~~~nv~i~ 320 (339)
T 2iq7_A 276 TNGVPITGLTLSKITGSVASSGTNVYILCASGACSNWKWSGVSVT 320 (339)
T ss_dssp CSSSCEEEEEEEEEEEEECTTSEEEEEECCTTCEEEEEEEEEEEE
T ss_pred CCCceEEEEEEEeEEEEeCCCCEEEEEEeCCCcEecEEEEeEEEE
Confidence 36899999999999987633233444 445544444444
No 25
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.86 E-value=1.5e-19 Score=181.91 Aligned_cols=213 Identities=21% Similarity=0.244 Sum_probs=164.3
Q ss_pred EEEEEeeeeEEEece---EEecC--CCC-------------eeeeeccccEEEEeEEEeCCCCCCCCCceeeecceeEEE
Q 012057 210 LIRFFMSSNLVVSGL---TIQNS--PQF-------------HMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGI 271 (472)
Q Consensus 210 ~i~~~~~~nv~I~~v---~i~ns--~~~-------------~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I 271 (472)
++.+. .++++|.|. +|... .+| .+.+..|+|++|++++|.+++.+ +|++. |++|+|
T Consensus 62 li~~~-~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~----~i~i~-~~nv~i 135 (336)
T 1nhc_A 62 LIRFG-GKDLTVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTPVQ----AISVQ-ATNVHL 135 (336)
T ss_dssp SEECC-EESCEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSSC----CEEEE-EEEEEE
T ss_pred EEEEe-cCCEEEEcCCCeEEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCCcc----EEEEE-eCCEEE
Confidence 45554 599999996 56432 233 37889999999999999997653 69999 999999
Q ss_pred EceEEecC---------CceEEeCCCceeEEEEeeeecCC-CcceecccCccCCCCcEEEEEEEeEEEecCCceEEEEee
Q 012057 272 YNSMISNG---------DDCISIGTGCSDVDIADVTCGPS-HGISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKTW 341 (472)
Q Consensus 272 ~n~~i~~g---------DD~I~i~s~s~nI~I~n~~~~~~-~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~ 341 (472)
+|+.|.+. .|+|.+.+ ++||+|+||++..+ ++|+|++- +||+|+||++... +||.|++.
T Consensus 136 ~~~~I~~~~~d~~~~~ntDGidi~~-s~nV~I~n~~i~~gDDciaiksg---------~nI~i~n~~~~~g-hGisiGS~ 204 (336)
T 1nhc_A 136 NDFTIDNSDGDDNGGHNTDGFDISE-STGVYISGATVKNQDDCIAINSG---------ESISFTGGTCSGG-HGLSIGSV 204 (336)
T ss_dssp ESCEEECTTHHHHTCCSCCSEEECS-CEEEEEESCEEESSSEEEEESSE---------EEEEEESCEEESS-SEEEEEEE
T ss_pred EEEEEECCCcccccCCCCCcEEecC-CCeEEEEeCEEEcCCCEEEEeCC---------eEEEEEeEEEECC-cCceEccC
Confidence 99999873 68999988 99999999999886 46999761 8999999999987 79999986
Q ss_pred cC-CCceeeeEEEEeEEEEccCeeEEEEeeccCCccccCCCCceEEEeEEEEeEEEEeeCCCCceEEe---cC-------
Q 012057 342 QG-GTGCVSDLSFENIQMENVRNCINIDQYYCLSKECLNQTSAVFVTGITYRNIKGTYDVRTPPIHFA---CS------- 410 (472)
Q Consensus 342 ~g-~~g~v~nI~f~Ni~~~~v~~~i~I~~~~~~~~~~~~~~~~~~i~nI~f~nI~~t~~~~~~~~~i~---~~------- 410 (472)
.. ..+.|+||+|+|+++.+..++++|+.+.. ..+.++||+|+||++..... .++.+. |.
T Consensus 205 g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g---------~~G~v~nI~~~ni~~~~v~~-~~i~i~~~y~~~~~~~~p 274 (336)
T 1nhc_A 205 GGRDDNTVKNVTISDSTVSNSANGVRIKTIYK---------ETGDVSEITYSNIQLSGITD-YGIVIEQDYENGSPTGTP 274 (336)
T ss_dssp SSSSCCEEEEEEEEEEEEESCSEEEEEEEETT---------CCCEEEEEEEEEEEEEEESS-EEEEEEEEEETTEECSCC
T ss_pred ccccCCCEEEEEEEeeEEECCCcEEEEEEECC---------CCCEEeeeEEeeEEeecccc-ccEEEEeecCCCCCCCCC
Confidence 33 44789999999999999999999998632 34689999999999887532 255443 11
Q ss_pred -CCCceeeEEEEEEEEEcCCCCccCCce-----eecceeeeeeee
Q 012057 411 -DTVPCTKITMAEVELLPYEGQLLDDPF-----CWNAYGTQETLT 449 (472)
Q Consensus 411 -~~~~~~~i~~~ni~~~~~~~~~~~~~~-----c~~~~g~~~~~~ 449 (472)
...+++||+|+||+.+...+..+..+. |.|..-....++
T Consensus 275 ~~~~~i~~i~~~ni~gt~~~~~~~v~i~c~~~~c~ni~~~nv~i~ 319 (336)
T 1nhc_A 275 STGIPITDVTVDGVTGTLEDDATQVYILCGDGSCSDWTWSGVDLS 319 (336)
T ss_dssp CSSSCEEEEEEEEEEEEECTTCEEEEEECCTTCEEEEEEEEEEEE
T ss_pred CCCceEEEEEEEeEEEEeCCCCEEEEEEcCCCcEecEEEEeEEEE
Confidence 136899999999999987622223344 445444444444
No 26
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.84 E-value=1.6e-19 Score=181.46 Aligned_cols=223 Identities=13% Similarity=0.138 Sum_probs=168.1
Q ss_pred cCcEEEeeeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEeeeeEEEece--EEecC--CCC-----------
Q 012057 168 DDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNLVVSGL--TIQNS--PQF----------- 232 (472)
Q Consensus 168 ~nvtI~G~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~~~nv~I~~v--~i~ns--~~~----------- 232 (472)
++++|+..|++...- ..|. .| ++.+. .+|++|.|- +|... .+|
T Consensus 39 ~~~~l~~~g~~~~~~-~~w~-------------------~~-~i~~~-~~ni~I~G~~G~idG~G~~ww~~~~~~~~~~r 96 (335)
T 1k5c_A 39 KGATVTMAGDITFAK-TTLD-------------------GP-LFTID-GTGINFVGADHIFDGNGALYWDGKGTNNGTHK 96 (335)
T ss_dssp TTCEEEECSCEEECC-CCSC-------------------SC-SEEEE-EEEEEEECTTCEEECCGGGTCCSCTTTSSSCC
T ss_pred CCeEEEEeccEeccc-cccc-------------------Cc-EEEEE-ccCEEEEeCccEEcCChhHhhhcccccCCCCC
Confidence 678888777775321 2232 12 56675 699999993 55321 122
Q ss_pred --eeeeeccccEEEEeEEEeCCCCCCCCCceeeeccee-EEEEceEEec----------CCceEEeCCCceeEEEEeeee
Q 012057 233 --HMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKS-VGIYNSMISN----------GDDCISIGTGCSDVDIADVTC 299 (472)
Q Consensus 233 --~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~n-V~I~n~~i~~----------gDD~I~i~s~s~nI~I~n~~~ 299 (472)
.+.+..|+ ++|+++++.+++.+ +|++..|++ |+|+|+.|.+ ..|+|.+ + ++||+|+||++
T Consensus 97 P~~i~~~~~~-v~i~giti~nsp~~----~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi-~-s~nV~I~n~~i 169 (335)
T 1k5c_A 97 PHPFLKIKGS-GTYKKFEVLNSPAQ----AISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV-S-ANNVTIQNCIV 169 (335)
T ss_dssp CCCSEEEEEE-EEEESCEEESCSSC----CEEEEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE-E-CSSEEEESCEE
T ss_pred CeEEEEeceE-EEEEEEEEECCCcc----eEEEEccCCeEEEEEEEEECCCCcccccCCCCCeEcc-c-CCeEEEEeeEE
Confidence 27888999 99999999997653 699999999 9999999987 3578999 5 99999999999
Q ss_pred cCC-CcceecccCccCCCCcEEEEEEEeEEEecCCceEEEEeecCCCceeeeEEEEeEEEEccCeeEEEEeeccCCcccc
Q 012057 300 GPS-HGISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKTWQGGTGCVSDLSFENIQMENVRNCINIDQYYCLSKECL 378 (472)
Q Consensus 300 ~~~-~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~v~~~i~I~~~~~~~~~~~ 378 (472)
..+ +.|+|++- +||+|+||++... +||.|++... .+.|+||+|+|++|.+..++++|+.+...
T Consensus 170 ~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisIGS~g~-~~~v~nV~v~n~~~~~t~~girIKt~~g~----- 233 (335)
T 1k5c_A 170 KNQDDCIAINDG---------NNIRFENNQCSGG-HGISIGSIAT-GKHVSNVVIKGNTVTRSMYGVRIKAQRTA----- 233 (335)
T ss_dssp ESSSCSEEEEEE---------EEEEEESCEEESS-CCEEEEEECT-TCEEEEEEEESCEEEEEEEEEEEEEETTC-----
T ss_pred EcCCCEEEeeCC---------eeEEEEEEEEECC-ccCeEeeccC-CCCEEEEEEEeeEEECCCceEEEEEeCCC-----
Confidence 986 56999871 8999999999987 8999998732 57999999999999999999999976421
Q ss_pred CCCCceEEEeEEEEeEEEEeeCCCCceEEec-------C--CCCceeeEEEEEEE--EEcCCCCccCCceee
Q 012057 379 NQTSAVFVTGITYRNIKGTYDVRTPPIHFAC-------S--DTVPCTKITMAEVE--LLPYEGQLLDDPFCW 439 (472)
Q Consensus 379 ~~~~~~~i~nI~f~nI~~t~~~~~~~~~i~~-------~--~~~~~~~i~~~ni~--~~~~~~~~~~~~~c~ 439 (472)
..+.++||+|+||++....+ .|+.+.. . ...+++||+|+||+ .+...+..+..+.|.
T Consensus 234 ---~~G~v~nI~f~ni~~~~v~~-~~i~i~~~Y~~~~~~p~~~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c~ 301 (335)
T 1k5c_A 234 ---TSASVSGVTYDANTISGIAK-YGVLISQSYPDDVGNPGTGAPFSDVNFTGGATTIKVNNAATRVTVECG 301 (335)
T ss_dssp ---CSCEEEEEEEESCEEEEEEE-EEEEEEEEETSSSSSCCSSSCEEEEEECSSCEEEEECTTCEEEEEECS
T ss_pred ---CcceEeeeEEEEEEEEcccc-ccEEEEeeCCCCCCCCCCCceEEEEEEEEEEEeeEEcCCceEEEEECC
Confidence 12689999999999876421 2555542 1 24689999999999 445432223445554
No 27
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.84 E-value=3.5e-19 Score=182.14 Aligned_cols=222 Identities=18% Similarity=0.260 Sum_probs=173.2
Q ss_pred CCceEEEeCceEeCCCC-------CCCCCC---------CCCCceEEEEEeecCcEEEeeeeeecCCCcccCCCCCCCCC
Q 012057 132 KPGLVFQLDGVLMPPDG-------PDTWPK---------ADSRKQWLVFYKLDDMTFTGKGTIEGNGQPWWDLPCKPHRG 195 (472)
Q Consensus 132 ~s~v~l~~~Gtl~~~~~-------~~~~~~---------~~~~~~~i~~~~~~nvtI~G~GtIdG~g~~~w~~~~~~~~g 195 (472)
..+++|.+.|+|.+... ...|.. ...+..++.+.+++|++|+|.-..+. ..|
T Consensus 108 ~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~iti~ns---p~~--------- 175 (376)
T 1bhe_A 108 TTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINS---PNF--------- 175 (376)
T ss_dssp CBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEEEEEEEEEEECC---SSC---------
T ss_pred CEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceEEEEEeEEEECC---CcE---------
Confidence 67888998899887543 234431 11356678999999999999444332 122
Q ss_pred CCCCCCCCCCCCCeEEEEEeeeeEEEeceEEecCC----CCeeeeeccccEEEEeEEEeCCCCCCCCCceeee------c
Q 012057 196 PNGSTSSGPCDSPALIRFFMSSNLVVSGLTIQNSP----QFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIE------N 265 (472)
Q Consensus 196 ~~g~~~~g~~~rp~~i~~~~~~nv~I~~v~i~ns~----~~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~------~ 265 (472)
.+.+..|++++|++++|.+.. ..+|++..|+||+|+|++|.+. .|+|.+. +
T Consensus 176 --------------~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~g-----DDcIaiks~~~~~~ 236 (376)
T 1bhe_A 176 --------------HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATG-----DDNVAIKAYKGRAE 236 (376)
T ss_dssp --------------SEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECS-----SCSEEEEECTTSCC
T ss_pred --------------EEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecC-----CCeEEEcccCCCCC
Confidence 478899999999999998742 2359999999999999999973 5899998 6
Q ss_pred ceeEEEEceEEecCCceEEeCC---CceeEEEEeeeecCC-CcceecccCccCCCCcEEEEEEEeEEEecCCceEEEEee
Q 012057 266 TKSVGIYNSMISNGDDCISIGT---GCSDVDIADVTCGPS-HGISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKTW 341 (472)
Q Consensus 266 s~nV~I~n~~i~~gDD~I~i~s---~s~nI~I~n~~~~~~-~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~ 341 (472)
|+||+|+||.+..++ +|++++ +.+||+|+||++.++ +|++|++.. ...+.++||+|+|++|.+..++|.|...
T Consensus 237 s~nI~I~n~~~~~gh-GisiGSe~~~v~nV~v~n~~~~~t~~GirIKt~~--g~~G~v~ni~f~ni~~~~v~~~i~i~~~ 313 (376)
T 1bhe_A 237 TRNISILHNDFGTGH-GMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDK--SAAGVVNGVRYSNVVMKNVAKPIVIDTV 313 (376)
T ss_dssp EEEEEEEEEEECSSS-CEEEEEEESSEEEEEEEEEEEESCSEEEEEECCT--TTCCEEEEEEEEEEEEESCSEEEEEETT
T ss_pred ceEEEEEeeEEEccc-cEEeccCCccEeeEEEEeeEEeCCCcEEEEEEec--CCCceEeeEEEEeEEEeCCCceEEEEee
Confidence 999999999999875 599976 469999999999985 699998753 2467899999999999999999988753
Q ss_pred cC-----CCceeeeEEEEeEEEEccCeeEEEEeeccCCccccCCCCceEEEeEEEEeEEEEee
Q 012057 342 QG-----GTGCVSDLSFENIQMENVRNCINIDQYYCLSKECLNQTSAVFVTGITYRNIKGTYD 399 (472)
Q Consensus 342 ~g-----~~g~v~nI~f~Ni~~~~v~~~i~I~~~~~~~~~~~~~~~~~~i~nI~f~nI~~t~~ 399 (472)
.. ..+.|+||+|+||+.++.. ++.|.. .+..+++||+|+||+++..
T Consensus 314 y~~~~~~~~~~i~ni~~~ni~gt~~~-~~~l~g-----------~~~~~~~~I~l~nv~l~~~ 364 (376)
T 1bhe_A 314 YEKKEGSNVPDWSDITFKDVTSETKG-VVVLNG-----------ENAKKPIEVTMKNVKLTSD 364 (376)
T ss_dssp SSCCCCCCCCEEEEEEEEEEEECSCC-EEEEEC-----------TTCSSCEEEEEEEEECCTT
T ss_pred ccCCCCCcCcEEEEEEEEEEEEEecc-eEEEEe-----------CCCCCeeeEEEEeEEEecC
Confidence 21 2357999999999999754 565552 1334568999999997653
No 28
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.84 E-value=9.8e-19 Score=176.79 Aligned_cols=204 Identities=19% Similarity=0.189 Sum_probs=158.2
Q ss_pred EEEEEeeeeEEEec---eEEecCC--CC--------------eeee-e-ccccEEEEeEEEeCCCCCCCCCceeeeccee
Q 012057 210 LIRFFMSSNLVVSG---LTIQNSP--QF--------------HMKF-D-GCEGVMIDKLSISSPKLSPNTDGIHIENTKS 268 (472)
Q Consensus 210 ~i~~~~~~nv~I~~---v~i~ns~--~~--------------~i~~-~-~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~n 268 (472)
+|.+ ..++++|.| -+|.... +| .+.+ . .|++++|+++++.+++. .+|++..|++
T Consensus 63 ~i~~-~~~ni~I~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~----~~i~i~~~~n 137 (349)
T 1hg8_A 63 PIVI-SGSNITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPV----HCFDITGSSQ 137 (349)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCSS----EEEEEESCEE
T ss_pred eEEE-ECccEEEEecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCC----ceEEEeccCC
Confidence 5666 459999998 5664321 11 3667 6 78899999999999754 5799999999
Q ss_pred EEEEceEEecC-----------------CceEEeCCCceeEEEEeeeecCC-CcceecccCccCCCCcEEEEEEEeEEEe
Q 012057 269 VGIYNSMISNG-----------------DDCISIGTGCSDVDIADVTCGPS-HGISIGSLGAHYSQACVSNITVRNAIIR 330 (472)
Q Consensus 269 V~I~n~~i~~g-----------------DD~I~i~s~s~nI~I~n~~~~~~-~gi~iGs~~~~~~~~~i~nI~i~n~~i~ 330 (472)
|+|+|+.|.+. .|+|.+.. ++||+|+||++..+ ++|+|++- +||+|+||++.
T Consensus 138 v~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~ 207 (349)
T 1hg8_A 138 LTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISS-SDHVTLDNNHVYNQDDCVAVTSG---------TNIVVSNMYCS 207 (349)
T ss_dssp EEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEES-CEEEEEEEEEEECSSCSEEESSE---------EEEEEEEEEEE
T ss_pred EEEEEEEEECCCCccccccccccccCCCCCeEEEcc-ccEEEEEeeEEecCCCeEEeeCC---------eEEEEEeEEEe
Confidence 99999999862 57898877 99999999999886 57999761 89999999999
Q ss_pred cCCceEEEEee-cCCCceeeeEEEEeEEEEccCeeEEEEeeccCCccccCCCCceEEEeEEEEeEEEEeeCCCCceEEec
Q 012057 331 ESDNGLRIKTW-QGGTGCVSDLSFENIQMENVRNCINIDQYYCLSKECLNQTSAVFVTGITYRNIKGTYDVRTPPIHFAC 409 (472)
Q Consensus 331 ~~~~gi~I~~~-~g~~g~v~nI~f~Ni~~~~v~~~i~I~~~~~~~~~~~~~~~~~~i~nI~f~nI~~t~~~~~~~~~i~~ 409 (472)
+. +||.|++. ....+.|+||+|+|++|.+..++++|+.+.. ..+.++||+|+||++....+ .++.+..
T Consensus 208 ~g-hGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g---------~~G~v~nI~~~ni~~~~v~~-~~i~i~~ 276 (349)
T 1hg8_A 208 GG-HGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSG---------ATGTINNVTYQNIALTNIST-YGVDVQQ 276 (349)
T ss_dssp SS-CCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETT---------CCEEEEEEEEEEEEEEEEEE-EEEEEEE
T ss_pred CC-cceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCC---------CCccccceEEEEEEEEcccc-ccEEEEe
Confidence 86 79999886 2234789999999999999999999997632 35689999999999776421 2444432
Q ss_pred ---C------C--CCceeeEEEEEEEEEcCCCCccCCceee
Q 012057 410 ---S------D--TVPCTKITMAEVELLPYEGQLLDDPFCW 439 (472)
Q Consensus 410 ---~------~--~~~~~~i~~~ni~~~~~~~~~~~~~~c~ 439 (472)
. + ..+++||+|+||+.+...+..+..+.|.
T Consensus 277 ~Y~~~~~~~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~c~ 317 (349)
T 1hg8_A 277 DYLNGGPTGKPTNGVKISNIKFIKVTGTVASSAQDWFILCG 317 (349)
T ss_dssp EECSSSBCSCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC
T ss_pred eccCCCCCCcccCCceEEEEEEEeEEEEeCCCCEEEEEEeC
Confidence 1 1 2479999999999988763333455554
No 29
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.84 E-value=2.3e-18 Score=178.24 Aligned_cols=169 Identities=16% Similarity=0.191 Sum_probs=142.9
Q ss_pred eeeeeccccEEEEeEEEeCCCCCCCCCceeeecceeEEEEceEEec----CCceEEeCCCceeEEEEeeeecCCC-ccee
Q 012057 233 HMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYNSMISN----GDDCISIGTGCSDVDIADVTCGPSH-GISI 307 (472)
Q Consensus 233 ~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~----gDD~I~i~s~s~nI~I~n~~~~~~~-gi~i 307 (472)
.+.+..|+|++|++++|.+++. .+|++..|+||+|+|+.|.+ +.|+|.+.. +||+|+||++..++ +|+|
T Consensus 129 ~i~~~~~~nv~I~~iti~nsp~----~~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~--~nV~I~n~~i~~gDD~Iai 202 (422)
T 1rmg_A 129 ILRLTDVTHFSVHDIILVDAPA----FHFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG--SNIWVHDVEVTNKDECVTV 202 (422)
T ss_dssp EEEEEEEEEEEEEEEEEECCSS----CSEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE--EEEEEEEEEEESSSEEEEE
T ss_pred EEEEcccceEEEECeEEECCCc----eEEEEeCcCCEEEEeEEEECCCCCCCccEeecC--CeEEEEeeEEeCCCCeEEe
Confidence 4788999999999999998654 47999999999999999997 468999986 89999999999874 6999
Q ss_pred cccCccCCCCcEEEEEEEeEEEecCCceEEEEeecCCCceeeeEEEEeEEEEccCeeEEEEeeccCCccccCCCCceEEE
Q 012057 308 GSLGAHYSQACVSNITVRNAIIRESDNGLRIKTWQGGTGCVSDLSFENIQMENVRNCINIDQYYCLSKECLNQTSAVFVT 387 (472)
Q Consensus 308 Gs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~v~~~i~I~~~~~~~~~~~~~~~~~~i~ 387 (472)
++ ..+||+|+||++... +||+|++. +..+.|+||+|+|++|.+..+++.|+.+ . ..+.++
T Consensus 203 ~s--------~~~nI~I~n~~~~~~-~GisIGS~-g~~~~v~nV~v~n~~~~~~~~Gi~Ikt~-~---------g~G~v~ 262 (422)
T 1rmg_A 203 KS--------PANNILVESIYCNWS-GGCAMGSL-GADTDVTDIVYRNVYTWSSNQMYMIKSN-G---------GSGTVS 262 (422)
T ss_dssp EE--------EEEEEEEEEEEEESS-SEEEEEEE-CTTEEEEEEEEEEEEEESSSCSEEEEEB-B---------CCEEEE
T ss_pred CC--------CCcCEEEEeEEEcCC-cceeeccc-CCCCcEEEEEEEeEEEeccceEEEEEec-C---------CCcEEE
Confidence 86 469999999999887 79999986 3346899999999999999999999973 1 235899
Q ss_pred eEEEEeEEEEeeCCCCceEEec---------CCCCceeeEEEEEEEEEcCC
Q 012057 388 GITYRNIKGTYDVRTPPIHFAC---------SDTVPCTKITMAEVELLPYE 429 (472)
Q Consensus 388 nI~f~nI~~t~~~~~~~~~i~~---------~~~~~~~~i~~~ni~~~~~~ 429 (472)
||+|+||++..... ++.+.. ....+++||+|+||+.+...
T Consensus 263 nI~~~NI~~~~v~~--~i~i~~~y~~~~~~~~~~~~i~nI~~~nI~gt~~~ 311 (422)
T 1rmg_A 263 NVLLENFIGHGNAY--SLDIDGYWSSMTAVAGDGVQLNNITVKNWKGTEAN 311 (422)
T ss_dssp EEEEEEEEEEEESC--SEEEETBCTTSCCBSSSCCEEEEEEEEEEEEEESC
T ss_pred EEEEEeEEEECccc--cEEEEeeccCCCcccCCCceEEEEEEEeEEEEecc
Confidence 99999999876533 666652 13468999999999999864
No 30
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.76 E-value=3.7e-17 Score=173.87 Aligned_cols=237 Identities=14% Similarity=0.089 Sum_probs=169.4
Q ss_pred CcE-EEecCCcEEEEeeeeecCCCCCceEEEeCceEeCCCCCCCCC-------CCCCCceEEEEE------eecCcEEEe
Q 012057 109 AGV-VLAPSDYVFKITSTIFSGPCKPGLVFQLDGVLMPPDGPDTWP-------KADSRKQWLVFY------KLDDMTFTG 174 (472)
Q Consensus 109 g~~-V~iP~G~ty~i~~~~l~gp~~s~v~l~~~Gtl~~~~~~~~~~-------~~~~~~~~i~~~------~~~nvtI~G 174 (472)
+-+ |++++| .++.+.+.+.+ ..+++|.+.|+|.+.. ...|. ....+...+.+. +++||+|+|
T Consensus 264 nvt~L~L~~G-A~l~g~i~~~~--~~nv~ItG~GtIDG~G-~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~G 339 (574)
T 1ogo_X 264 NTYWVYLAPG-AYVKGAIEYFT--KQNFYATGHGILSGEN-YVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVG 339 (574)
T ss_dssp TCCEEEECTT-EEEESCEEECC--SSCEEEESSCEEECTT-SCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEES
T ss_pred CCceEEecCC-cEEEccEEEeC--ceeEEEEeCEEEeCCC-cccccccccccccccCCcceEEEEeccccCCceeEEEEC
Confidence 345 888888 67777777776 7899999999998753 22332 111123334444 899999999
Q ss_pred eeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEeeeeE--EEeceEEecCCCC---eeeeeccccEEEEeEEE
Q 012057 175 KGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNL--VVSGLTIQNSPQF---HMKFDGCEGVMIDKLSI 249 (472)
Q Consensus 175 ~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~~~nv--~I~~v~i~ns~~~---~i~~~~~~nv~I~~~~i 249 (472)
..+++. .+| .+++..|+|+ +|+++++.+++.+ +|++. +||+|+||+|
T Consensus 340 iti~NS---p~w-----------------------~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I 391 (574)
T 1ogo_X 340 PTINAP---PFN-----------------------TMDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFW 391 (574)
T ss_dssp CEEECC---SSC-----------------------SEEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEE
T ss_pred eEEECC---CCc-----------------------EEeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEE
Confidence 777663 233 3788999999 9999999876544 48887 9999999999
Q ss_pred eCCCCCCCCCceeeecceeEEEEceEEecCCc-e-EEeCC---CceeEEEEeeeecCCC---------cceecccCccC-
Q 012057 250 SSPKLSPNTDGIHIENTKSVGIYNSMISNGDD-C-ISIGT---GCSDVDIADVTCGPSH---------GISIGSLGAHY- 314 (472)
Q Consensus 250 ~~~~~~~n~DGI~i~~s~nV~I~n~~i~~gDD-~-I~i~s---~s~nI~I~n~~~~~~~---------gi~iGs~~~~~- 314 (472)
.+. .|+|.+.+ +||+|+||.+..+.. + |++++ ..+||+|+||++.+.. +..+|++..+.
T Consensus 392 ~~g-----DDcIaIks-~NI~I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~ 465 (574)
T 1ogo_X 392 HVN-----DDAIKIYY-SGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYAS 465 (574)
T ss_dssp EES-----SCSEECCS-TTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSS
T ss_pred ECC-----CCEEEECC-ccEEEEeEEEECCCCCceEEEcCCCCcEEEEEEEeEEEECCcccceeccccceeecccccccc
Confidence 984 48998876 999999999998764 4 89986 4799999999997643 23333332110
Q ss_pred -----CCCcEEEEEEEeEEEecCCceEEEEeecCCCceeeeEEEEeEEEEc------cCe-eEEEEeeccCCccccCCCC
Q 012057 315 -----SQACVSNITVRNAIIRESDNGLRIKTWQGGTGCVSDLSFENIQMEN------VRN-CINIDQYYCLSKECLNQTS 382 (472)
Q Consensus 315 -----~~~~i~nI~i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~------v~~-~i~I~~~~~~~~~~~~~~~ 382 (472)
...++ ||+|+|+++.+...++ |.... .+.|+||+|+||++++ ... +..+... .
T Consensus 466 ~~~~~~g~gV-NI~f~NI~~~~v~~~i-i~i~p--~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G~-----------~ 530 (574)
T 1ogo_X 466 GMSPDSRKSI-SMTVSNVVCEGLCPSL-FRITP--LQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAA-----------S 530 (574)
T ss_dssp SCCCEEEEEE-EEEEEEEEECSSBCEE-EEECC--SEEEEEEEEEEEEETTCBCCSTTCTTCEEECCC-----------T
T ss_pred ccccCCCceE-EEEEEeEEEEceeEee-EEECC--CCCEEEEEEEeEEEeCccccccccccceeEecC-----------C
Confidence 11238 9999999999988875 44332 3479999999999986 221 2222211 1
Q ss_pred ceEEEeEEEEeEEEEee
Q 012057 383 AVFVTGITYRNIKGTYD 399 (472)
Q Consensus 383 ~~~i~nI~f~nI~~t~~ 399 (472)
..++||+|+||++...
T Consensus 531 -~~v~nI~~~NV~i~g~ 546 (574)
T 1ogo_X 531 -GLTMGLAISAWTIGGQ 546 (574)
T ss_dssp -TCCEEEEEEEEEETTE
T ss_pred -CccceEEEEeEEEeCE
Confidence 4679999999997543
No 31
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.75 E-value=7.6e-17 Score=171.44 Aligned_cols=248 Identities=14% Similarity=0.110 Sum_probs=170.0
Q ss_pred CcE-EEecCCcEEEEeeeeec-CCCCCceEEEeCceEeCCCCCCCC-------CC-CCCCceEEEE------EeecCcEE
Q 012057 109 AGV-VLAPSDYVFKITSTIFS-GPCKPGLVFQLDGVLMPPDGPDTW-------PK-ADSRKQWLVF------YKLDDMTF 172 (472)
Q Consensus 109 g~~-V~iP~G~ty~i~~~~l~-gp~~s~v~l~~~Gtl~~~~~~~~~-------~~-~~~~~~~i~~------~~~~nvtI 172 (472)
+.+ |++++| .++.+++.+. + ..+++|.+.|+|.+... ..| +. ...+...+.+ .+++|++|
T Consensus 222 ~~~~L~l~~G-A~L~gs~~~~~~--~~nv~ItG~GtIDG~G~-~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I 297 (549)
T 1x0c_A 222 SVTWVYFAPG-AYVKGAVEFLST--ASEVKASGHGVLSGEQY-VWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVL 297 (549)
T ss_dssp TCCEEEECTT-EEEESCEEECCC--SSEEEEESSCEEECTTS-CTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEE
T ss_pred CCCeEecCCC-CEEEEEEEEecC--ceeEEEEeeEEEECCCc-eecccCcccccccccCCCceEEEeeccccCCceEEEE
Confidence 455 889999 6777777665 3 56999998999987643 222 11 0012222333 78999999
Q ss_pred EeeeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEE-ee-ee--EEEeceEEecCCCC---eeeeeccccEEEE
Q 012057 173 TGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFF-MS-SN--LVVSGLTIQNSPQF---HMKFDGCEGVMID 245 (472)
Q Consensus 173 ~G~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~-~~-~n--v~I~~v~i~ns~~~---~i~~~~~~nv~I~ 245 (472)
+|...++. .+| .+++. .| ++ ++|+++++.++..| +|++. +||+|+
T Consensus 298 ~Giti~Ns---p~w-----------------------~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~ 349 (549)
T 1x0c_A 298 NGVTVSAP---PFN-----------------------SMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQ 349 (549)
T ss_dssp ESCEEECC---SSC-----------------------SEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEE
T ss_pred ECcEEECC---Cce-----------------------eEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEE
Confidence 99666553 344 25544 45 69 99999999865433 47777 999999
Q ss_pred eEEEeCCCCCCCCCceeeecceeEEEEceEEecCCc-e-EEeCC---CceeEEEEeeeecCCC-------cceecccCcc
Q 012057 246 KLSISSPKLSPNTDGIHIENTKSVGIYNSMISNGDD-C-ISIGT---GCSDVDIADVTCGPSH-------GISIGSLGAH 313 (472)
Q Consensus 246 ~~~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~gDD-~-I~i~s---~s~nI~I~n~~~~~~~-------gi~iGs~~~~ 313 (472)
|++|.+. .|+|.+.+ +||+|+||.+..+.. + |++++ ..+||+|+||++.+.. |..|++...+
T Consensus 350 n~~i~~g-----DDcIaIks-~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~ 423 (549)
T 1x0c_A 350 DVFYHTD-----DDGLKMYY-SNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNY 423 (549)
T ss_dssp EEEEEES-----SCCEECCS-SSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBT
T ss_pred eeEEeCC-----CCEEEECC-CCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeEEECccccccccceEEEeccccc
Confidence 9999984 48999987 999999999987654 5 89885 3799999999997753 4335541111
Q ss_pred --C------C-CCcEEEEEEEeEEEecCC-ceEEEEeecCCC-ceeeeEEEEeEEEEccC-----e-eEEEEeeccCCcc
Q 012057 314 --Y------S-QACVSNITVRNAIIRESD-NGLRIKTWQGGT-GCVSDLSFENIQMENVR-----N-CINIDQYYCLSKE 376 (472)
Q Consensus 314 --~------~-~~~i~nI~i~n~~i~~~~-~gi~I~~~~g~~-g~v~nI~f~Ni~~~~v~-----~-~i~I~~~~~~~~~ 376 (472)
+ + .+.++||+|+|++|.+.. .|+.+....+.. +.|+||+|+||+++++. . +..+..+... .
T Consensus 424 ~~g~~~~~~d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G~~~~--~ 501 (549)
T 1x0c_A 424 LYAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDL--N 501 (549)
T ss_dssp TTCTTSCCSCCCCBEEEEEEEEEEEEEEEEEEEECCSEEECCSEEEEEEEEEEEEEEEECCGGGTCSCEEECCCBBT--T
T ss_pred ccCccccCcCCCceEccEEEEeEEEEeEEEeceEEeeecCCCCCcCccEEEEEEEEEccccccccccceEEeCCCcc--c
Confidence 1 2 568999999999998875 555442222222 35999999999998875 2 3333322110 1
Q ss_pred ccCCCCceEEEeEEEEeEEEEee
Q 012057 377 CLNQTSAVFVTGITYRNIKGTYD 399 (472)
Q Consensus 377 ~~~~~~~~~i~nI~f~nI~~t~~ 399 (472)
|. ....++||+|+||++...
T Consensus 502 ~~---~~~~v~nI~f~NV~i~G~ 521 (549)
T 1x0c_A 502 NG---KQITVTDFSIEGFTVGNT 521 (549)
T ss_dssp TC---CBCCEEEEEEEEEEETTE
T ss_pred cc---cceeeeeEEEEeEEEeCe
Confidence 11 235799999999987654
No 32
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.57 E-value=5.8e-14 Score=141.24 Aligned_cols=233 Identities=11% Similarity=0.157 Sum_probs=156.1
Q ss_pred CCCceEEeeee----cccCCCCcchHHHHHHHHHHHhh-------cCCcEEEecCCcEEEE-eeeeecCCCCCceEEEeC
Q 012057 73 STDCIFDVRDY----GAVGDGSADDTAAFRAAWKAACA-------VEAGVVLAPSDYVFKI-TSTIFSGPCKPGLVFQLD 140 (472)
Q Consensus 73 ~~~~~~~V~df----GA~gDG~tDdT~Aiq~Ai~~a~~-------~~g~~V~iP~G~ty~i-~~~~l~gp~~s~v~l~~~ 140 (472)
+....|||++| +|+||+.+|++++|+++|+++.+ ..|+++++|+| +|.+ +.+.+. |+.++|.++
T Consensus 10 ~~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~pGdvI~L~~G-~Y~l~g~ivId---kp~LtL~G~ 85 (410)
T 2inu_A 10 NSPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPG-DYDLHTQVVVD---VSYLTIAGF 85 (410)
T ss_dssp --CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCCCEEEECCSE-EEEECSCEEEC---CTTEEEECS
T ss_pred ccCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCCCCEEEECCC-eeccCCcEEEe---cCcEEEEec
Confidence 45788999999 99999999999999999998664 45899999999 8985 667664 555888876
Q ss_pred c--e----EeCCCCCCCCCCCCC------------CceEEEEEe-----ecCcEEEeeeeeecCCCcccCCCCCCCCCCC
Q 012057 141 G--V----LMPPDGPDTWPKADS------------RKQWLVFYK-----LDDMTFTGKGTIEGNGQPWWDLPCKPHRGPN 197 (472)
Q Consensus 141 G--t----l~~~~~~~~~~~~~~------------~~~~i~~~~-----~~nvtI~G~GtIdG~g~~~w~~~~~~~~g~~ 197 (472)
+ + |..-.....|..-.. ....|.... .++|+|+| -+|+|....=|-.
T Consensus 86 ~~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~-v~I~G~~~~~~G~--------- 155 (410)
T 2inu_A 86 GHGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRD-FCLDGVGFTPGKN--------- 155 (410)
T ss_dssp CCCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEECCEEES-CEEECCCCSSSTT---------
T ss_pred CCCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccCCcEECC-EEEECCEeecCCC---------
Confidence 4 2 431111122221111 112222221 26666666 5555542111110
Q ss_pred CCCCCCCCCCCeEEEEEe-eeeEEEeceEEecCCCCeeeeeccccEEEEeEEEeCCCCCCCCCceeeec-ceeEEEEceE
Q 012057 198 GSTSSGPCDSPALIRFFM-SSNLVVSGLTIQNSPQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIEN-TKSVGIYNSM 275 (472)
Q Consensus 198 g~~~~g~~~rp~~i~~~~-~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~-s~nV~I~n~~ 275 (472)
.+ ......|.+.. .++++|++.+|.+. .++|.++.+++.+|++..|... ..||++.+ ++...|+|+.
T Consensus 156 --s~---~~~dAGI~v~~~~d~~~I~nn~i~~~-~fGI~l~~a~~~~I~~N~I~e~-----GNgI~L~G~~~~~~I~~N~ 224 (410)
T 2inu_A 156 --SY---HNGKTGIEVASDNDSFHITGMGFVYL-EHALIVRGADALRVNDNMIAEC-----GNCVELTGAGQATIVSGNH 224 (410)
T ss_dssp --SC---CCSCEEEEECSCEESCEEESCEEESC-SEEEEETTEESCEEESCEEESS-----SEEEEECSCEESCEEESCE
T ss_pred --Cc---ccCceeEEEeccCCeEEEECCEEecc-cEEEEEccCCCcEEECCEEEec-----CCceeeccccccceEecce
Confidence 00 01224677765 88899999999974 7889999999999999999852 36788887 7888888888
Q ss_pred EecCCce--EEeCCCceeEEEEeeeecC-C-CcceecccCccCCCCcEEEEEEEeEEEecCCceEEEEe
Q 012057 276 ISNGDDC--ISIGTGCSDVDIADVTCGP-S-HGISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKT 340 (472)
Q Consensus 276 i~~gDD~--I~i~s~s~nI~I~n~~~~~-~-~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~ 340 (472)
+..++|| |.+.. +.+.+|+++.+.. + .||.+-. ..+-.|+++.+.+...|+.+..
T Consensus 225 i~~~~dG~gIyl~n-s~~~~I~~N~i~~~~R~gIh~m~---------s~~~~i~~N~f~~~~~Gi~~M~ 283 (410)
T 2inu_A 225 MGAGPDGVTLLAEN-HEGLLVTGNNLFPRGRSLIEFTG---------CNRCSVTSNRLQGFYPGMLRLL 283 (410)
T ss_dssp EECCTTSEEEEEES-EESCEEESCEECSCSSEEEEEES---------CBSCEEESCEEEESSSCSEEEE
T ss_pred eeecCCCCEEEEEe-CCCCEEECCCcccCcceEEEEEc---------cCCCEEECCEEecceeEEEEEE
Confidence 8888887 66665 7777888876633 4 4666622 2455677888887777766543
No 33
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.51 E-value=5.2e-13 Score=138.92 Aligned_cols=159 Identities=14% Similarity=0.120 Sum_probs=120.6
Q ss_pred EeeeeEEEeceE---EecCC-----CC-eeeeeccccEEEEeEEEeCCCCCCCCCceeeecceeEEEEceEEecCCceEE
Q 012057 214 FMSSNLVVSGLT---IQNSP-----QF-HMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYNSMISNGDDCIS 284 (472)
Q Consensus 214 ~~~~nv~I~~v~---i~ns~-----~~-~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~gDD~I~ 284 (472)
.+.+|++|.|-- +.+.. .+ .+.+..|+|++|++++|.+.. .+..+.+|.+. +.||+.
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w--------~ih~s~~V~i~------NtDGi~ 171 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNK--------TIFASILVDVT------ERNGRL 171 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCS--------CBSCSEEECEE------EETTEE
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccc--------eEeeceeeeee------cCCCce
Confidence 567888888762 33322 12 377899999999999998731 23345555443 357788
Q ss_pred eCCCceeEEEEeeeecCCC-cceecccCccCCCCcEEEEEEEeEEEecCCceEEEEee-----cCCCceeeeEEEEeEEE
Q 012057 285 IGTGCSDVDIADVTCGPSH-GISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKTW-----QGGTGCVSDLSFENIQM 358 (472)
Q Consensus 285 i~s~s~nI~I~n~~~~~~~-gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~-----~g~~g~v~nI~f~Ni~~ 358 (472)
+ .++||+|+||++.+++ ++ |+. ....++||+|+||+|.+ .+||+|+++ .+..|.|+||+|+|++|
T Consensus 172 i--~s~nV~I~n~~I~~gddgi--Gs~----~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~ 242 (464)
T 1h80_A 172 H--WSRNGIIERIKQNNALFGY--GLI----QTYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQGGIRNIFADNIRC 242 (464)
T ss_dssp E--EEEEEEEEEEEEESCCTTC--EEE----EESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCCEEEEEEEEEEEE
T ss_pred e--eccCEEEeceEEecCCCeE--Eec----ccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCCcEEEEEEEeEEE
Confidence 7 4899999999999975 55 332 24678999999999999 799999998 55668999999999999
Q ss_pred EccCeeEEEEeeccCCccccCCCCceEEEeEEEEeEEEEeeCCCCceEEec
Q 012057 359 ENVRNCINIDQYYCLSKECLNQTSAVFVTGITYRNIKGTYDVRTPPIHFAC 409 (472)
Q Consensus 359 ~~v~~~i~I~~~~~~~~~~~~~~~~~~i~nI~f~nI~~t~~~~~~~~~i~~ 409 (472)
+++.++|.|+. ....++||+|+||+++... .++.+.+
T Consensus 243 ~nv~~~I~I~p------------~~~~isnItfeNI~~t~~~--~aI~i~q 279 (464)
T 1h80_A 243 SKGLAAVMFGP------------HFMKNGDVQVTNVSSVSCG--SAVRSDS 279 (464)
T ss_dssp ESSSEEEEEEC------------TTCBCCCEEEEEEEEESSS--CSEEECC
T ss_pred ECCceeEEEeC------------CCceEeEEEEEEEEEEccc--eeEEEec
Confidence 99999999982 2246899999999998743 3666653
No 34
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.40 E-value=7.3e-11 Score=124.89 Aligned_cols=188 Identities=15% Similarity=0.172 Sum_probs=125.7
Q ss_pred eeeeec------cccEEEEeEEEeCCCCCCCCCceeeecceeEEEEceEEecC-----CceEEeCCCceeEEEEeeeecC
Q 012057 233 HMKFDG------CEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYNSMISNG-----DDCISIGTGCSDVDIADVTCGP 301 (472)
Q Consensus 233 ~i~~~~------~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~g-----DD~I~i~s~s~nI~I~n~~~~~ 301 (472)
+++.++ |+||+|+||+|.+. ..|||.+.+|+||+|+||.+... ..+|+++++++||+|+||++.+
T Consensus 170 Gid~DGi~fd~~S~NV~I~Nc~I~~t----GDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~n 245 (609)
T 3gq8_A 170 PYLGDGTTAPNPSENIWIENCEATGF----GDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKG 245 (609)
T ss_dssp CCCCTTCCCSSCCEEEEEESCEEESC----SSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEES
T ss_pred cccCCCccccccceeEEEEeeEEEec----CCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEEC
Confidence 355555 99999999999753 45999999999999999999654 5799999988999999999998
Q ss_pred C-CcceecccCccCCCCcEEEEEEEeEEEecCCc--eEEEEeecC----CCceeeeEEEEeEEEEccC-----------e
Q 012057 302 S-HGISIGSLGAHYSQACVSNITVRNAIIRESDN--GLRIKTWQG----GTGCVSDLSFENIQMENVR-----------N 363 (472)
Q Consensus 302 ~-~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~--gi~I~~~~g----~~g~v~nI~f~Ni~~~~v~-----------~ 363 (472)
. .|+.|++.+ +.+.++||+|.|+...+.-+ .++...... ......||+++|++..... .
T Consensus 246 t~~GIrIKt~~---~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~~p~~~~~~y~~~~~r 322 (609)
T 3gq8_A 246 CYGGIEIKAHG---DAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPR 322 (609)
T ss_dssp SSEEEEEEECT---TSCCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEESCCCTTCHHHHCCCE
T ss_pred CCCEEEEEecC---CCCccccEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceEEeecccCceeeCCCcc
Confidence 5 689999764 35678999999986665434 444322211 2346789999999886432 2
Q ss_pred eEEEEeecc--------CCccccC-CCCceEE----EeEEEEeEEEEeeCC-CCceEEecCCCCceeeEEEEEEEEEcC
Q 012057 364 CINIDQYYC--------LSKECLN-QTSAVFV----TGITYRNIKGTYDVR-TPPIHFACSDTVPCTKITMAEVELLPY 428 (472)
Q Consensus 364 ~i~I~~~~~--------~~~~~~~-~~~~~~i----~nI~f~nI~~t~~~~-~~~~~i~~~~~~~~~~i~~~ni~~~~~ 428 (472)
++.+..+.. ...+..+ +.+...| +||+|+||.++.-.. ...+.+.+.+ ..+..|.++|+.+...
T Consensus 323 ~l~vs~~~~v~i~~~~~~~d~~y~~~~~~~~~q~~~~~~~l~~~~i~gf~~a~~~i~~~gg~-~~~~~v~i~n~~i~~s 400 (609)
T 3gq8_A 323 VLAVSAYYGVVINGLTGYTDDPNLLTETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGS-RGGDAVNISNVTLNNS 400 (609)
T ss_dssp EEEEESCEEEEEEEEEEECSCTTSCCSEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCCC-CTTCCEEEEEEEEESC
T ss_pred eEEEEcCCCeEEcCceEccCCccccCCceEEEEEecceeEEcceEEecccCCCCCeEEeCCC-CcCCeEEEeccEEeec
Confidence 444433211 0000000 0122222 677888887775432 2245554443 4577788888887653
No 35
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.40 E-value=1.4e-11 Score=129.74 Aligned_cols=232 Identities=13% Similarity=0.015 Sum_probs=153.1
Q ss_pred CCceEEEeCceEeCCCCCCCCCCCCCC--ceEEEEEeecCcEEEeeeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCe
Q 012057 132 KPGLVFQLDGVLMPPDGPDTWPKADSR--KQWLVFYKLDDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPA 209 (472)
Q Consensus 132 ~s~v~l~~~Gtl~~~~~~~~~~~~~~~--~~~i~~~~~~nvtI~G~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~ 209 (472)
..+++|.+.|+|.+. +...|+..... ++++.+.+++ |+|.-.++. ...|
T Consensus 149 ~~NItItG~GtIDGq-G~~wW~~~~~~~~RP~l~f~~c~---I~GITi~NS--DP~w----------------------- 199 (600)
T 2x6w_A 149 LENCHIYGHGVVDFG-GYEFGASSQLRNGVAFGRSYNCS---VTGITFQNG--DVTW----------------------- 199 (600)
T ss_dssp EEEEEEESSCEEECT-TCCCSSTTCCEEEEECCSEEEEE---EESCEEESC--CCSC-----------------------
T ss_pred ceeEEEecceeeeCC-ccccccccccCCCCCEEEEeeeE---EeCeEEECC--CCcc-----------------------
Confidence 457778888898874 34556533211 2335555555 666333331 1222
Q ss_pred EEEE---EeeeeEEEeceE----EecCCCCeeeeeccccEEEEeEEEeCCCCCCCCCceee-ecce--eEEEEceEEecC
Q 012057 210 LIRF---FMSSNLVVSGLT----IQNSPQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHI-ENTK--SVGIYNSMISNG 279 (472)
Q Consensus 210 ~i~~---~~~~nv~I~~v~----i~ns~~~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i-~~s~--nV~I~n~~i~~g 279 (472)
.+.+ ..|+|++|++++ |.+++.. ++. |+|+|++|.+ .+|+|.+ .+.+ ++.++ .+..+
T Consensus 200 ~I~iG~~~~c~NVtI~nvtfi~aI~sspNT----DGI--V~I~nc~I~t-----GDDCIAI~KSGs~~ni~~e--~~~~G 266 (600)
T 2x6w_A 200 AITLGWNGYGSNCYVRKCRFINLVNSSVNA----DHS--TVYVNCPYSG-----VESCYFSMSSSFARNIACS--VQLHQ 266 (600)
T ss_dssp SEEECBTTBEEEEEEESCEEECCCCCSSCC----CEE--EEEECSSSEE-----EESCEEECCCTTHHHHEEE--EEECS
T ss_pred EEEeCCCCCcccEEEeCeEEcceEecCCCC----CEE--EEEEeeEEec-----CCcEEEEecCCCcCCeEEE--EEcCC
Confidence 4788 899999999999 6663321 222 8899998887 3599999 7543 45676 56678
Q ss_pred CceEEeCCC----ceeEEEEeeeecCCCcceecccCccCCCCcEEEEEEEeEEEecCCceEEEEee--cCCCceeeeEEE
Q 012057 280 DDCISIGTG----CSDVDIADVTCGPSHGISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKTW--QGGTGCVSDLSF 353 (472)
Q Consensus 280 DD~I~i~s~----s~nI~I~n~~~~~~~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~--~g~~g~v~nI~f 353 (472)
+.+|+|++. .+||+|+| .|++.. ++++.++||+|+|++|.+...+|.+... ....+.|+||+|
T Consensus 267 HgGISIGSe~~ggV~NV~V~N---------rIKt~~--G~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~IsnItf 335 (600)
T 2x6w_A 267 HDTFYRGSTVNGYCRGAYVVM---------HAAEAA--GAGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHLNDVIV 335 (600)
T ss_dssp SSEEEESCEEEEESEEEEEEE---------CGGGCT--TTCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEEEEEEE
T ss_pred CCcEEecccccCcEEEEEEEE---------EEEeec--CCCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceEEEEEE
Confidence 889999983 46777777 333321 2457899999999999999888888764 223568999999
Q ss_pred EeEEEEccCe-------eEEEEeeccCCccccCCCCceEEEeEEEEeEEEEeeC---CCCceEEecCCCCceeeEEEEEE
Q 012057 354 ENIQMENVRN-------CINIDQYYCLSKECLNQTSAVFVTGITYRNIKGTYDV---RTPPIHFACSDTVPCTKITMAEV 423 (472)
Q Consensus 354 ~Ni~~~~v~~-------~i~I~~~~~~~~~~~~~~~~~~i~nI~f~nI~~t~~~---~~~~~~i~~~~~~~~~~i~~~ni 423 (472)
+||+.+.... +..|..... .|. ......|+||+|+|++..... ..+++- -...+++|+|.+=
T Consensus 336 kNItgTsas~aav~~~~g~~i~g~p~---~~~-~~~~~~Ie~V~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~ 407 (600)
T 2x6w_A 336 SGNIVSIGERAAFSAPFGAFIDIGPD---NSG-ASNVQDIQRVLVTGNSFYAPANITDSAAIT----LRANLNGCTFIAN 407 (600)
T ss_dssp ESCEEEECSCCTTSSSCEEEEEECCC---TTC-CSSSCCEEEEEEESCEEECCTTCSSEEEEE----ECSCBSCEEEESC
T ss_pred EeEEEEeccccccccccceEEEecCc---ccc-cccccceeEEEEeceEEEcCCccCCCccee----eeccccceEEecC
Confidence 9999986532 255554321 121 235679999999999985421 112222 2456778888765
Q ss_pred E
Q 012057 424 E 424 (472)
Q Consensus 424 ~ 424 (472)
.
T Consensus 408 ~ 408 (600)
T 2x6w_A 408 N 408 (600)
T ss_dssp E
T ss_pred c
Confidence 5
No 36
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.37 E-value=1.1e-10 Score=125.58 Aligned_cols=208 Identities=15% Similarity=0.172 Sum_probs=135.9
Q ss_pred eeeeec------cccEEEEeEEEeCCCCCCCCCceeeecceeEEEEceEEecC-----CceEEeCCCceeEEEEeeeecC
Q 012057 233 HMKFDG------CEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYNSMISNG-----DDCISIGTGCSDVDIADVTCGP 301 (472)
Q Consensus 233 ~i~~~~------~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~g-----DD~I~i~s~s~nI~I~n~~~~~ 301 (472)
+++.++ |+||+|+||+|.+. ..|||.+.+|+||+|+||.+... ..+|+++++++||+|+||++.+
T Consensus 170 Gid~DGi~fdi~S~NV~I~Nc~I~nt----GDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~n 245 (772)
T 3gqn_A 170 PYLGDGTTAPNPSENIWIENCEATGF----GDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKG 245 (772)
T ss_dssp CCCCTTCCCSSCCEEEEEESCEEESC----SSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEES
T ss_pred cCCCcCcccccccceEEEEeeEEEec----CcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEEC
Confidence 355555 99999999999763 45999999999999999999554 5799999989999999999998
Q ss_pred C-CcceecccCccCCCCcEEEEEEEeEEEecCCc--eEEEEeecC----CCceeeeEEEEeEEEEccC-----------e
Q 012057 302 S-HGISIGSLGAHYSQACVSNITVRNAIIRESDN--GLRIKTWQG----GTGCVSDLSFENIQMENVR-----------N 363 (472)
Q Consensus 302 ~-~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~--gi~I~~~~g----~~g~v~nI~f~Ni~~~~v~-----------~ 363 (472)
+ .|+.|++.+ +.+.++||+|.|+...+.-+ +++...... ..-...||.++|++..... .
T Consensus 246 T~nGIRIKt~~---~gg~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~~P~~~~~ly~~~~pr 322 (772)
T 3gqn_A 246 CYGGIEIKAHG---DAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPR 322 (772)
T ss_dssp SSEEEEECCCT---TSCCCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEESCCCSSCHHHHCCCE
T ss_pred CCcEEEEEEeC---CCCccccEEEECCEEeccCeEecceEEccccCCCCCCccCccEEeecceEEcccccCceeeCCCcc
Confidence 5 689998754 45679999999765554323 444221110 1125788888888876431 2
Q ss_pred eEEEEeecc--------CCccccC-CCCceEE----EeEEEEeEEEEeeCC-CCceEEecCCCCceeeEEEEEEEEEcCC
Q 012057 364 CINIDQYYC--------LSKECLN-QTSAVFV----TGITYRNIKGTYDVR-TPPIHFACSDTVPCTKITMAEVELLPYE 429 (472)
Q Consensus 364 ~i~I~~~~~--------~~~~~~~-~~~~~~i----~nI~f~nI~~t~~~~-~~~~~i~~~~~~~~~~i~~~ni~~~~~~ 429 (472)
++.+..+.. -+.+... +.+...| +||+|+||.++.-.. ...+.+.+.+ ..+..|.++|+.+....
T Consensus 323 aL~vsay~~v~i~~~~~igd~~y~~~~~~i~~q~~~~~~~ln~i~i~gf~~a~~~i~v~gg~-~~~~~v~i~n~~i~~s~ 401 (772)
T 3gqn_A 323 VLAVSAYYGVVINGLTGYTDDPNLLTETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGS-RGGDAVNISNVTLNNSG 401 (772)
T ss_dssp EEEEESCEEEEEEEEEEECSCTTSCCSEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCST-TCCEEEEEEEEEEESCC
T ss_pred eEEEEcCCCcEecCceeccCcccccCCceEEEEEecceeEEcceEEecccCCCCCeEEeCCC-CCCCeEEEeccEEeecc
Confidence 444433211 0000000 1122222 788888888776432 2245555544 56888999999886543
Q ss_pred ------CCccCCceeecceeeeeee
Q 012057 430 ------GQLLDDPFCWNAYGTQETL 448 (472)
Q Consensus 430 ------~~~~~~~~c~~~~g~~~~~ 448 (472)
|..+......|+......-
T Consensus 402 ~~gi~~g~~~~~~~~~n~~~~~~~~ 426 (772)
T 3gqn_A 402 RYGVSIGSGIENVSITNISGIGDGI 426 (772)
T ss_dssp SEEEEECTTCCCEEEEEEEEECTTS
T ss_pred cccEEecCceeEEEEEeeEEEccCC
Confidence 2334455666666555443
No 37
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.28 E-value=1.6e-10 Score=117.61 Aligned_cols=193 Identities=13% Similarity=0.057 Sum_probs=137.9
Q ss_pred EEEEEeee-eEEEeceEEecCCCCeeeeeccccEEEEeEEEeCCCCCCCCCceeeec-ceeEEEEceEEecCCceEEeC-
Q 012057 210 LIRFFMSS-NLVVSGLTIQNSPQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIEN-TKSVGIYNSMISNGDDCISIG- 286 (472)
Q Consensus 210 ~i~~~~~~-nv~I~~v~i~ns~~~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~-s~nV~I~n~~i~~gDD~I~i~- 286 (472)
.+.+..|+ ++++++..+.+....+|.++.|++.+|+++++..+ +.|||++.. |++++|+|+.+...++|+.+.
T Consensus 150 gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~----~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~ 225 (377)
T 2pyg_A 150 GFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYAN----DRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQ 225 (377)
T ss_dssp SEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESC----SSCSEEEETTCEEEEEESCEEESCSSCSEEEE
T ss_pred eEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEcc----ccCcEEEEeccCCeEEECCEEECccCceEEEe
Confidence 36666654 78999999988778889999999999999976653 579999987 999999999999999988872
Q ss_pred ------CCceeEEEEeeeecC--CCcceecccCccCCCCcEEEEEEEeEEEecC-CceEEEEeecCCCceeeeEEEEeEE
Q 012057 287 ------TGCSDVDIADVTCGP--SHGISIGSLGAHYSQACVSNITVRNAIIRES-DNGLRIKTWQGGTGCVSDLSFENIQ 357 (472)
Q Consensus 287 ------s~s~nI~I~n~~~~~--~~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~-~~gi~I~~~~g~~g~v~nI~f~Ni~ 357 (472)
..+++++|+++++++ .+|+.+. .+++++|+|+++.++ ..||+|+. +++++|+|.+
T Consensus 226 ~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~~---------~~~~v~i~~N~i~~~~~~GI~i~g-------~~~~~i~~N~ 289 (377)
T 2pyg_A 226 RGLEDLALPSNILIDGGAYYDNAREGVLLK---------MTSDITLQNADIHGNGSSGVRVYG-------AQDVQILDNQ 289 (377)
T ss_dssp CCSSCCCCCEEEEEESCEEESCSSCSEEEE---------EEEEEEEESCEEESCSSCSEEEEE-------EEEEEEESCE
T ss_pred ccccCCCCCccEEEECCEEEcCccCceEec---------cccCeEEECCEEECCCCceEEEec-------CCCcEEECcE
Confidence 348999999999987 4677773 368999999999998 78999983 7899999999
Q ss_pred EEccCe----eEEEEeeccCCc-ccc--CCCCceEEEeEEEEeEEEEeeCCCCceEEecCCCCceeeEEEEEEEEEcCC
Q 012057 358 MENVRN----CINIDQYYCLSK-ECL--NQTSAVFVTGITYRNIKGTYDVRTPPIHFACSDTVPCTKITMAEVELLPYE 429 (472)
Q Consensus 358 ~~~v~~----~i~I~~~~~~~~-~~~--~~~~~~~i~nI~f~nI~~t~~~~~~~~~i~~~~~~~~~~i~~~ni~~~~~~ 429 (472)
+.+... ++.+.+.|+... .+. .......|++.+|+++.. ....+.+.. ..+++++++|..+....
T Consensus 290 i~~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~N~i~g~~~----~~~~i~~~~---~~~~~~~i~~n~i~~~~ 361 (377)
T 2pyg_A 290 IHDNAQAAAVPEVLLQSFDDTAGASGTYYTTLNTRIEGNTISGSAN----STYGIQERN---DGTDYSSLIDNDIAGVQ 361 (377)
T ss_dssp EESCCSSSSCCSEEEECEEETTSSSCEEECCBCCEEESCEEECCSS----CCEEEEECS---SSCBCCEEESCEEESSS
T ss_pred EECCcccccccceEEEEecCCCccceeeeeccCeEEECCEEECcCC----CccceEEcc---CCCccEEEECcEEeCCc
Confidence 987542 333333343211 000 012334455555555321 111333322 44668888888887754
No 38
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.20 E-value=1.2e-10 Score=125.10 Aligned_cols=67 Identities=22% Similarity=0.352 Sum_probs=57.2
Q ss_pred CCCceEEeeeecccCCCCcchHHHHHHHHHHHhhcCCcEEEecCCcEEEEee-eeecCCCCCceEEEeCc--eEeCC
Q 012057 73 STDCIFDVRDYGAVGDGSADDTAAFRAAWKAACAVEAGVVLAPSDYVFKITS-TIFSGPCKPGLVFQLDG--VLMPP 146 (472)
Q Consensus 73 ~~~~~~~V~dfGA~gDG~tDdT~Aiq~Ai~~a~~~~g~~V~iP~G~ty~i~~-~~l~gp~~s~v~l~~~G--tl~~~ 146 (472)
+....++|+||||+|||+||||+|||+||++| .++++||||+| +|+++. +.+ +++++|.+++ +|++.
T Consensus 396 ~~~~~vnVkd~GA~GDG~tDDT~Ai~~al~aa--~~g~~v~~P~G-~Y~vt~Ti~i----p~~~~ivG~~~~~I~~~ 465 (758)
T 3eqn_A 396 APSDFVSVRSQGAKGDGHTDDTQAIKNVFAKY--AGCKIIFFDAG-TYIVTDTIQI----PAGTQIVGEVWSVIMGT 465 (758)
T ss_dssp CGGGEEETTTTTCCCEEEEECHHHHHHHHHHH--TTTSEEECCSE-EEEESSCEEE----CTTCEEECCSSEEEEEC
T ss_pred cccceEEeeeccccCCCCchhHHHHHHHHHHh--cCCCEEEECCC-EeEECCeEEc----CCCCEEEecccceEecC
Confidence 55678999999999999999999999999954 45889999999 899975 556 7899999886 56653
No 39
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.03 E-value=1.7e-08 Score=103.45 Aligned_cols=245 Identities=14% Similarity=0.129 Sum_probs=150.6
Q ss_pred CCceEEeeeecc-cCCCCcchHH-HHHHHHHHHhhcCCcEEEecCCcEEE--E-----eeeeecCCCCCc-----eEEEe
Q 012057 74 TDCIFDVRDYGA-VGDGSADDTA-AFRAAWKAACAVEAGVVLAPSDYVFK--I-----TSTIFSGPCKPG-----LVFQL 139 (472)
Q Consensus 74 ~~~~~~V~dfGA-~gDG~tDdT~-Aiq~Ai~~a~~~~g~~V~iP~G~ty~--i-----~~~~l~gp~~s~-----v~l~~ 139 (472)
.+.++.|..-|- .++|.+-+.+ .||+|++.| ..|.+|++.+| +|. + ..+.+. +++ ++|..
T Consensus 13 ~~~~~yVsp~Gsd~~~G~t~~~P~tiq~Ai~~a--~pGdtI~l~~G-tY~~~~~e~~~~~i~~~---~sGt~~~pIti~~ 86 (400)
T 1ru4_A 13 TKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAAV--NPGELILLKPG-TYTIPYTQGKGNTITFN---KSGKDGAPIYVAA 86 (400)
T ss_dssp CSCEEEECTTCCTTCCSSSTTSCBCHHHHHHHC--CTTCEEEECSE-EEECCCBTTBCCCEEEC---CCCBTTBCEEEEE
T ss_pred CccEEEEcCCCCCCCCCccccCCccHHHHHhhC--CCCCEEEECCC-eEccccccccceeEEec---CCCCCCCCEEEEE
Confidence 355677754442 2444122211 799999965 35899999999 898 3 233332 333 77776
Q ss_pred Cc----eEeCCCCC-CCCCCCCCCceEEEEEeecCcEEEeeeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEE
Q 012057 140 DG----VLMPPDGP-DTWPKADSRKQWLVFYKLDDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFF 214 (472)
Q Consensus 140 ~G----tl~~~~~~-~~~~~~~~~~~~i~~~~~~nvtI~G~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~ 214 (472)
.+ +|. ...+ ..|... ... +.. ..++++|+| -+|...+. . .|.+.
T Consensus 87 ~~g~~~vI~-~~~~~g~~~~~--~~~-i~i-~~~~~~i~g-l~I~n~g~-----------------------~--GI~v~ 135 (400)
T 1ru4_A 87 ANCGRAVFD-FSFPDSQWVQA--SYG-FYV-TGDYWYFKG-VEVTRAGY-----------------------Q--GAYVI 135 (400)
T ss_dssp GGGCCEEEE-CCCCTTCCCTT--CCS-EEE-CSSCEEEES-EEEESCSS-----------------------C--SEEEC
T ss_pred ecCCCCEEe-CCccCCccccc--eeE-EEE-ECCeEEEEe-EEEEeCCC-----------------------C--cEEEe
Confidence 52 344 2211 111100 011 222 567777777 34432111 0 34444
Q ss_pred eeeeEEEeceEEecCCCCeeeeeccc-cEEEEeEEEeCCCC----CCCCCceeeecc--eeEEEEceEEec-CCceEEeC
Q 012057 215 MSSNLVVSGLTIQNSPQFHMKFDGCE-GVMIDKLSISSPKL----SPNTDGIHIENT--KSVGIYNSMISN-GDDCISIG 286 (472)
Q Consensus 215 ~~~nv~I~~v~i~ns~~~~i~~~~~~-nv~I~~~~i~~~~~----~~n~DGI~i~~s--~nV~I~n~~i~~-gDD~I~i~ 286 (472)
. ++.+|+++++.+....+|.+.... +.+|++++|..... +.+.|||.+..+ .+.+|++|.+.. .||+|.+.
T Consensus 136 g-s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~ 214 (400)
T 1ru4_A 136 G-SHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLF 214 (400)
T ss_dssp S-SSCEEESCEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECT
T ss_pred C-CCcEEEeEEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCCcEEEE
Confidence 4 677899999998776678887744 88889999987542 246799988743 788899999874 78899987
Q ss_pred CCceeEEEEeeeecC--------------CCcceecccCccCCCCcEEEEEEEeEEEecCC-ceEEEEeecCCCceeeeE
Q 012057 287 TGCSDVDIADVTCGP--------------SHGISIGSLGAHYSQACVSNITVRNAIIRESD-NGLRIKTWQGGTGCVSDL 351 (472)
Q Consensus 287 s~s~nI~I~n~~~~~--------------~~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~-~gi~I~~~~g~~g~v~nI 351 (472)
.....|+|+||..+. +.||.+|.++ ...+.+|+||...+.. .|+...... .++
T Consensus 215 ~~~~~v~i~nn~a~~Ng~~~~~~n~~~gngnGf~lgg~~------~~~~~~v~nn~a~~N~~~G~~~n~~~------~~~ 282 (400)
T 1ru4_A 215 DSPQKVVIENSWAFRNGINYWNDSAFAGNGNGFKLGGNQ------AVGNHRITRSVAFGNVSKGFDQNNNA------GGV 282 (400)
T ss_dssp TCCSCCEEESCEEESTTCCCSCCTTCCCCCCSEECCCTT------CCCCCEEESCEEESCSSEEEECTTCS------SCC
T ss_pred ecCCCEEEEeEEEECCccccccccccccCCCCEEEeccC------CcCCEEEEeeEEECCcCcCEeecCCC------CCE
Confidence 656778999998753 2357776542 2346778888888763 477553211 236
Q ss_pred EEEeEEEEccCeeEEEE
Q 012057 352 SFENIQMENVRNCINID 368 (472)
Q Consensus 352 ~f~Ni~~~~v~~~i~I~ 368 (472)
+++|.++.+-...+.+.
T Consensus 283 ~i~nNt~~~N~~~~~~~ 299 (400)
T 1ru4_A 283 TVINNTSYKNGINYGFG 299 (400)
T ss_dssp EEESCEEESSSEEEEEC
T ss_pred EEECeEEECCccceEEe
Confidence 67777766554555553
No 40
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.83 E-value=4.2e-07 Score=91.31 Aligned_cols=78 Identities=22% Similarity=0.265 Sum_probs=59.4
Q ss_pred CCCCceeeecceeEEEEceEEecC------------------CceEEeCCCceeEEEEeeeecCC-CcceecccCccC-C
Q 012057 256 PNTDGIHIENTKSVGIYNSMISNG------------------DDCISIGTGCSDVDIADVTCGPS-HGISIGSLGAHY-S 315 (472)
Q Consensus 256 ~n~DGI~i~~s~nV~I~n~~i~~g------------------DD~I~i~s~s~nI~I~n~~~~~~-~gi~iGs~~~~~-~ 315 (472)
.+.|+|.+.++++|+|++|.|..+ |..+.++.++.+|+|+||+|... .++-+|+..... .
T Consensus 131 ~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~ 210 (355)
T 1pcl_A 131 AEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQ 210 (355)
T ss_pred ccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCccc
Confidence 357999999999999999999864 55677887789999999999874 467777643211 1
Q ss_pred CCcEEEEEEEeEEEecCC
Q 012057 316 QACVSNITVRNAIIRESD 333 (472)
Q Consensus 316 ~~~i~nI~i~n~~i~~~~ 333 (472)
.....+|++.++.+.+..
T Consensus 211 d~g~~~vT~hhN~f~~~~ 228 (355)
T 1pcl_A 211 DSGKLRVTFHNNVFDRVT 228 (355)
T ss_pred ccCcceEEEECcEEeCCc
Confidence 113458999999998763
No 41
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.57 E-value=6.3e-06 Score=81.67 Aligned_cols=117 Identities=15% Similarity=0.173 Sum_probs=79.5
Q ss_pred CCCceeeec-ceeEEEEceEEec----------CCceEEeCCCceeEEEEeeeecC-CCcceecccCccCCCCcEEEEEE
Q 012057 257 NTDGIHIEN-TKSVGIYNSMISN----------GDDCISIGTGCSDVDIADVTCGP-SHGISIGSLGAHYSQACVSNITV 324 (472)
Q Consensus 257 n~DGI~i~~-s~nV~I~n~~i~~----------gDD~I~i~s~s~nI~I~n~~~~~-~~gi~iGs~~~~~~~~~i~nI~i 324 (472)
..|+|.+.. +++|+|++|.+.. .|..+.++.++.+|+|+||.|.. ..+.-+|+.-... .+ -.+|++
T Consensus 119 ~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~-~~-~~~vT~ 196 (326)
T 3vmv_A 119 EGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKTMLVGHTDNAS-LA-PDKITY 196 (326)
T ss_dssp TSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEEECEEECSSSCGG-GC-CEEEEE
T ss_pred CCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCceEEEECCCCCCc-cc-CccEEE
Confidence 569999996 9999999999963 36688998889999999999987 3467777642111 01 158999
Q ss_pred EeEEEecCCc-eEEEEeecCCCceeeeEEEEeEEEEcc-CeeEEEEeeccCCccccCCCCceEEEeEEEEeE
Q 012057 325 RNAIIRESDN-GLRIKTWQGGTGCVSDLSFENIQMENV-RNCINIDQYYCLSKECLNQTSAVFVTGITYRNI 394 (472)
Q Consensus 325 ~n~~i~~~~~-gi~I~~~~g~~g~v~nI~f~Ni~~~~v-~~~i~I~~~~~~~~~~~~~~~~~~i~nI~f~nI 394 (472)
.++.+.+... .-+++ .+ .+.+-|..+.+. .+++... ....+.+++=.|++.
T Consensus 197 ~~N~f~~~~~R~Pr~r---~G-----~~Hv~NN~~~n~~~~~~~~~-----------~~a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 197 HHNYFNNLNSRVPLIR---YA-----DVHMFNNYFKDINDTAINSR-----------VGARVFVENNYFDNV 249 (326)
T ss_dssp ESCEEEEEEECTTEEE---SC-----EEEEESCEEEEESSCSEEEE-----------TTCEEEEESCEEEEE
T ss_pred EeeEecCCcCcCCccc---CC-----cEEEEccEEECCCceEEeec-----------CCcEEEEEceEEECC
Confidence 9999976521 22332 11 245555555554 2455443 235678888888888
No 42
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=98.56 E-value=1.1e-06 Score=92.36 Aligned_cols=207 Identities=10% Similarity=0.049 Sum_probs=117.8
Q ss_pred hHHHHHHHHHHHhhcCCcEEEecCCcEEEEeeeeecCC--CCCceEEEeC--c--eEeCCCCCCCCCCCCCCceEEEEEe
Q 012057 93 DTAAFRAAWKAACAVEAGVVLAPSDYVFKITSTIFSGP--CKPGLVFQLD--G--VLMPPDGPDTWPKADSRKQWLVFYK 166 (472)
Q Consensus 93 dT~Aiq~Ai~~a~~~~g~~V~iP~G~ty~i~~~~l~gp--~~s~v~l~~~--G--tl~~~~~~~~~~~~~~~~~~i~~~~ 166 (472)
+.+.||+|++.| ..|++|++++| +|.-..+.+.+. -...++|..+ | +|.+. ..+.. .
T Consensus 30 ~~~~Lq~Ai~~A--~pGDtI~L~~G-tY~~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~-------------~~l~i-~ 92 (506)
T 1dbg_A 30 SNETLYQVVKEV--KPGGLVQIADG-TYKDVQLIVSNSGKSGLPITIKALNPGKVFFTGD-------------AKVEL-R 92 (506)
T ss_dssp SHHHHHHHHHHC--CTTCEEEECSE-EEETCEEEECCCCBTTBCEEEEESSTTSEEEEES-------------CEEEE-C
T ss_pred CHHHHHHHHHhC--CCCCEEEECCC-EEecceEEEecCCcCCCCEEEECCCCCccEEeCC-------------ceEEE-E
Confidence 356899999954 34899999999 897444554321 1234555553 1 12221 00111 2
Q ss_pred ecCcEEEeeeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEeeeeEEEeceEEecCCCC-eeeee--------
Q 012057 167 LDDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNLVVSGLTIQNSPQF-HMKFD-------- 237 (472)
Q Consensus 167 ~~nvtI~G~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~~~nv~I~~v~i~ns~~~-~i~~~-------- 237 (472)
.++++|+| -+|.+.+....... .. .+..+.+. .++++|++++|.+...- .+.+.
T Consensus 93 g~~v~i~G-L~i~~~~~~~~~~~---~~------------~~~~iav~-G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l 155 (506)
T 1dbg_A 93 GEHLILEG-IWFKDGNRAIQAWK---SH------------GPGLVAIY-GSYNRITACVFDCFDEANSAYITTSLTEDGK 155 (506)
T ss_dssp SSSEEEES-CEEEEECCCTTTCC---TT------------SCCSEEEC-SSSCEEESCEEESCCSSCSCSEEECCCTTCC
T ss_pred cCCEEEEC-eEEECCCcceeeee---cc------------cccceEEe-cCCeEEEeeEEEcCCCCceeeEeecccceee
Confidence 36666666 33433221110000 00 01123333 47888999998875332 02222
Q ss_pred ccccEEEEeEEEeCCCCCCCCC----ceeeec-------ceeEEEEceEEec------CCceEEeCC---CceeEEEEee
Q 012057 238 GCEGVMIDKLSISSPKLSPNTD----GIHIEN-------TKSVGIYNSMISN------GDDCISIGT---GCSDVDIADV 297 (472)
Q Consensus 238 ~~~nv~I~~~~i~~~~~~~n~D----GI~i~~-------s~nV~I~n~~i~~------gDD~I~i~s---~s~nI~I~n~ 297 (472)
..++.+|++++|.......... ||++.+ +.+.+|+|+.|.. +-+.+.++. .+.+.+|+|+
T Consensus 156 ~g~~n~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~~~~N~~e~iR~G~h~m~s~~~~VenN 235 (506)
T 1dbg_A 156 VPQHCRIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQKPGNAGGGIRIGYYRNDIGRCLVDSN 235 (506)
T ss_dssp CCCSCEEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEECCCSSSCCCSEEECSSTTCBCCCEEESC
T ss_pred eccccEEECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEcccccCCCccccEEEEEEecccCCcEEECC
Confidence 4567789999998743222223 777775 3688999999884 335566653 2578888998
Q ss_pred eecCCC-cceecccCccCCCCcEEEEEEEeEEEecCCceEEEEe
Q 012057 298 TCGPSH-GISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKT 340 (472)
Q Consensus 298 ~~~~~~-gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~ 340 (472)
.+...+ |..|=+.. ..+.+|+++++.++..+|.+..
T Consensus 236 ~f~~~~gg~aim~sk-------S~~n~i~~N~~~~~~ggi~l~~ 272 (506)
T 1dbg_A 236 LFMRQDSEAEIITSK-------SQENVYYGNTYLNCQGTMNFRH 272 (506)
T ss_dssp EEEEECSSSEEEEEE-------SBSCEEESCEEESCSSEEEEEE
T ss_pred EEEeccCcEEEEEEe-------cCCEEEECCEEEcccCcEEEee
Confidence 887643 34441110 0145799999998877777654
No 43
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.54 E-value=1.7e-06 Score=86.79 Aligned_cols=127 Identities=13% Similarity=0.112 Sum_probs=89.7
Q ss_pred CeeeeeccccEEEEeEEEeCCC------------------CCCCCCceeeecceeEEEEceEEecCCceE-EeCCCceeE
Q 012057 232 FHMKFDGCEGVMIDKLSISSPK------------------LSPNTDGIHIENTKSVGIYNSMISNGDDCI-SIGTGCSDV 292 (472)
Q Consensus 232 ~~i~~~~~~nv~I~~~~i~~~~------------------~~~n~DGI~i~~s~nV~I~n~~i~~gDD~I-~i~s~s~nI 292 (472)
.+|.+..++||.|++++|.... ...+.|||.+.++++|+|++|.|..+.|++ .+..++.+|
T Consensus 106 ~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~~s~~v 185 (346)
T 1pxz_A 106 PCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGI 185 (346)
T ss_dssp CCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEECCSSEEEEEESSCEEE
T ss_pred ceEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEecCCCCcEeeccCcceE
Confidence 5688888999999999998642 124689999999999999999999987776 676679999
Q ss_pred EEEeeeecCC-CcceecccCccCCCCcEEEEEEEeEEE-ecCC-ceEEEEeecCCCceeeeEEEEeEEEEccC-eeEEE
Q 012057 293 DIADVTCGPS-HGISIGSLGAHYSQACVSNITVRNAII-RESD-NGLRIKTWQGGTGCVSDLSFENIQMENVR-NCINI 367 (472)
Q Consensus 293 ~I~n~~~~~~-~gi~iGs~~~~~~~~~i~nI~i~n~~i-~~~~-~gi~I~~~~g~~g~v~nI~f~Ni~~~~v~-~~i~I 367 (472)
+|+||++... .++.+|+..... .....+|++.++.+ .+.. +.-+++. ..+.+.|..+.+.. +++..
T Consensus 186 TISnn~f~~H~k~~l~G~sd~~~-~d~~~~vT~~~N~f~~~~~~R~Pr~r~--------g~~hv~NN~~~~~~~~~i~~ 255 (346)
T 1pxz_A 186 TISNNHFFNHHKVMLLGHDDTYD-DDKSMKVTVAFNQFGPNAGQRMPRARY--------GLVHVANNNYDPWNIYAIGG 255 (346)
T ss_dssp EEESCEEESEEEEEEESCCSSCG-GGGGCEEEEESCEECSSEEECTTEEES--------SEEEEESCEECCCSSCSEEE
T ss_pred EEEeeEEecCCceeEECCCCccc-cCCceEEEEEeeEEeCCccccCccEec--------ceEEEEeeEEEcccceEEec
Confidence 9999999873 468887642211 11235899999999 5542 2223321 14566666666543 44433
No 44
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.52 E-value=2e-06 Score=85.73 Aligned_cols=165 Identities=15% Similarity=0.166 Sum_probs=108.7
Q ss_pred EEEEEeeeeEEEeceEEecCCCCeeeee-ccccEEEEeEEEeCCCCCCCCCceeee-----cceeEEEEceEEecC----
Q 012057 210 LIRFFMSSNLVVSGLTIQNSPQFHMKFD-GCEGVMIDKLSISSPKLSPNTDGIHIE-----NTKSVGIYNSMISNG---- 279 (472)
Q Consensus 210 ~i~~~~~~nv~I~~v~i~ns~~~~i~~~-~~~nv~I~~~~i~~~~~~~n~DGI~i~-----~s~nV~I~n~~i~~g---- 279 (472)
.+.+.-.+|.+|.|-+.. -...+|.+. .++||.|+|++|.........|+|.+. .++||+|++|.+..+
T Consensus 65 ~~~l~v~sn~TI~G~~a~-i~g~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~ 143 (330)
T 2qy1_A 65 TVQIKNKSDVTIKGANGS-AANFGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKC 143 (330)
T ss_dssp EEEEESCCSEEEEECTTC-BBSSEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCC
T ss_pred eeEEEcCCCeEEECCCcE-EeeeeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEcccccc
Confidence 345555677777542210 113568888 899999999999975433357999999 599999999999643
Q ss_pred --------CceEEeCCCceeEEEEeeeecCC-CcceecccCccCCCCcEEEEEEEeEEEecCCc-eEEEEeecCCCceee
Q 012057 280 --------DDCISIGTGCSDVDIADVTCGPS-HGISIGSLGAHYSQACVSNITVRNAIIRESDN-GLRIKTWQGGTGCVS 349 (472)
Q Consensus 280 --------DD~I~i~s~s~nI~I~n~~~~~~-~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~-gi~I~~~~g~~g~v~ 349 (472)
|..+.++.++.+|+|+||+|... .++-+|+........ ..+|+|.++.+.+... .-++. . |
T Consensus 144 ~~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~sd~~~~~~-~~~vT~h~N~f~~~~~R~Pr~r---~--G--- 214 (330)
T 2qy1_A 144 SGAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNS-AARTTYHHNRFENVESRVPLQR---F--G--- 214 (330)
T ss_dssp TTCTTCSSCCSEEEESSCEEEEEESCEEEEEEECCEESSSTTCGGGG-GCEEEEESCEEEEEEECTTEEE---S--S---
T ss_pred ccCCcceeecccccccCcceEEEEcceeccCCeEEEECCCCccccCC-CceEEEECcEEcCCCCCCCcee---c--c---
Confidence 55678888899999999999873 467777632211111 2589999999976532 22332 1 2
Q ss_pred eEEEEeEEEEcc-CeeEEEEeeccCCccccCCCCceEEEeEEEEeEE
Q 012057 350 DLSFENIQMENV-RNCINIDQYYCLSKECLNQTSAVFVTGITYRNIK 395 (472)
Q Consensus 350 nI~f~Ni~~~~v-~~~i~I~~~~~~~~~~~~~~~~~~i~nI~f~nI~ 395 (472)
.+.+-|..+.+. .+++... ....+.+++=.|++.+
T Consensus 215 ~~hv~NN~~~n~~~~~i~~~-----------~~~~i~~e~N~F~~~~ 250 (330)
T 2qy1_A 215 LSHIYNNYFNNVTTSGINVR-----------MGGIAKIESNYFENIK 250 (330)
T ss_dssp EEEEESCEEEEECSCSEEEE-----------TTCEEEEESCEEEEEE
T ss_pred eEEEEeeEEEcccceEeccC-----------CCcEEEEEccEEECCC
Confidence 244555555544 3454432 2356777888888775
No 45
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.50 E-value=3.4e-06 Score=83.94 Aligned_cols=160 Identities=14% Similarity=0.094 Sum_probs=105.6
Q ss_pred eeEEEeceEEecCCCCeeeeeccccEEEEeEEEeCCCC-------CCCCCceeeecceeEEEEceEEecC-CceEEeCCC
Q 012057 217 SNLVVSGLTIQNSPQFHMKFDGCEGVMIDKLSISSPKL-------SPNTDGIHIENTKSVGIYNSMISNG-DDCISIGTG 288 (472)
Q Consensus 217 ~nv~I~~v~i~ns~~~~i~~~~~~nv~I~~~~i~~~~~-------~~n~DGI~i~~s~nV~I~n~~i~~g-DD~I~i~s~ 288 (472)
+|.+|.|..-.--...+|.+..++||.|+|++|+.... ....|+|.+.+++||+|++|.+..+ |..+.+..+
T Consensus 68 snkTI~G~ga~~I~G~Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~ 147 (340)
T 3zsc_A 68 SDKTIVGINDAKIVGGGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNGNDGAVDIKKY 147 (340)
T ss_dssp SSEEEEEEEEEEEEEEEEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEESCSSCSEEEETT
T ss_pred CCCEEEeccCcEEecCceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeeccCCccceEEecC
Confidence 45566554422001235677789999999999997531 1267999999999999999999985 446888877
Q ss_pred ceeEEEEeeeecCC-CcceecccCccC--CCCcEEEEEEEeEEEecCCc-eEEEEeecCCCceeeeEEEEeEEEEc----
Q 012057 289 CSDVDIADVTCGPS-HGISIGSLGAHY--SQACVSNITVRNAIIRESDN-GLRIKTWQGGTGCVSDLSFENIQMEN---- 360 (472)
Q Consensus 289 s~nI~I~n~~~~~~-~gi~iGs~~~~~--~~~~i~nI~i~n~~i~~~~~-gi~I~~~~g~~g~v~nI~f~Ni~~~~---- 360 (472)
+.+|+|+||.|... .+..+|+.-... ...+-.+|++.++.+.+... .-+++ . | .+.+-|..+.+
T Consensus 148 s~~vTISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r---~--G---~~Hv~NN~~~n~~~~ 219 (340)
T 3zsc_A 148 SNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIR---F--G---MAHVFNNFYSMGLRT 219 (340)
T ss_dssp CEEEEEESCEEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESCCBCTTEEE---S--S---EEEEESCEEECCCCC
T ss_pred CceEEEECcEeccCceeeEeCcCCCCccccccCCcEEEEECeEecCCCCCCCccc---C--C---eEEEEccEEECCccc
Confidence 99999999999874 467777632100 00012489999999987632 22332 1 1 23555555555
Q ss_pred ------c-CeeEEEEeeccCCccccCCCCceEEEeEEEEeEE
Q 012057 361 ------V-RNCINIDQYYCLSKECLNQTSAVFVTGITYRNIK 395 (472)
Q Consensus 361 ------v-~~~i~I~~~~~~~~~~~~~~~~~~i~nI~f~nI~ 395 (472)
. .+++... ....+.+++=.|++.+
T Consensus 220 ~~~~~~~~~yai~~~-----------~~a~i~~E~N~F~~~~ 250 (340)
T 3zsc_A 220 GVSGNVFPIYGVASA-----------MGAKVHVEGNYFMGYG 250 (340)
T ss_dssp SCSSCCSCCEEEEEE-----------TTCEEEEESCEEECSC
T ss_pred cccccceeeeeEecC-----------CCCEEEEECcEEECCC
Confidence 2 2344333 2356788888888875
No 46
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.50 E-value=3.2e-06 Score=84.87 Aligned_cols=162 Identities=12% Similarity=0.128 Sum_probs=107.5
Q ss_pred EEEEEe-eeeEEEeceEEecCCCCeeeeeccccEEEEeEEEeCCCC-CCCCCceeeecceeEEEEceEEecC--------
Q 012057 210 LIRFFM-SSNLVVSGLTIQNSPQFHMKFDGCEGVMIDKLSISSPKL-SPNTDGIHIENTKSVGIYNSMISNG-------- 279 (472)
Q Consensus 210 ~i~~~~-~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~~~~i~~~~~-~~n~DGI~i~~s~nV~I~n~~i~~g-------- 279 (472)
.+.+.. .+|++|.|.+- .....+|.+..++||.|+|++|..... ..+.|+|.+.+++||+|++|.|..+
T Consensus 81 ~~~i~~~~sn~TI~G~~~-~~~g~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~ 159 (353)
T 1air_A 81 GVEIKEFTKGITIIGANG-SSANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTP 159 (353)
T ss_dssp EEEEESBCSCEEEEECTT-CCBSSEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCG
T ss_pred ceEEEecCCCEEEEeccC-CCCCceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCccccccc
Confidence 455543 46788877531 112456888899999999999996431 2367999999999999999999753
Q ss_pred ------CceEEeCCCceeEEEEeeeecCC-CcceecccCccCCCCcEEEEEEEeEEEecCC-ceEEEEeecCCCceeeeE
Q 012057 280 ------DDCISIGTGCSDVDIADVTCGPS-HGISIGSLGAHYSQACVSNITVRNAIIRESD-NGLRIKTWQGGTGCVSDL 351 (472)
Q Consensus 280 ------DD~I~i~s~s~nI~I~n~~~~~~-~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~-~gi~I~~~~g~~g~v~nI 351 (472)
|..+.++.++.+|+|+||.|... .+..+|+... ... .+|+|.++.+.+.. +.-++. .| .+
T Consensus 160 ~~~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~---~~g-~~vT~hhN~f~~~~~R~Pr~r-----~G---~~ 227 (353)
T 1air_A 160 DNDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSS---DTG-RNITYHHNYYNDVNARLPLQR-----GG---LV 227 (353)
T ss_dssp GGCCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSTT---CCC-CEEEEESCEEEEEEECSCEEE-----SS---EE
T ss_pred ccccccccceeeecccCcEEEEeeEEcCCCceeEECCCcC---CCC-ceEEEEceEEcCCcCCCCCCc-----Cc---eE
Confidence 55678877799999999999874 3566666421 112 68999999997652 222332 12 23
Q ss_pred EEEeEEEEccC-eeEEEEeeccCCccccCCCCceEEEeEEEEeEE
Q 012057 352 SFENIQMENVR-NCINIDQYYCLSKECLNQTSAVFVTGITYRNIK 395 (472)
Q Consensus 352 ~f~Ni~~~~v~-~~i~I~~~~~~~~~~~~~~~~~~i~nI~f~nI~ 395 (472)
.+-|..+.+.. +++... ....+.+++=.|++.+
T Consensus 228 Hv~NN~~~n~~~~~~~~~-----------~~~~i~~e~N~F~~~~ 261 (353)
T 1air_A 228 HAYNNLYTNITGSGLNVR-----------QNGQALIENNWFEKAI 261 (353)
T ss_dssp EEESCEEEEESSCSEEEE-----------TTCEEEEESCEEEEEE
T ss_pred EEEccEEECCCCceeccC-----------CCcEEEEEceEEECCC
Confidence 44444444432 344332 2345677777777764
No 47
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.46 E-value=1e-05 Score=81.38 Aligned_cols=130 Identities=14% Similarity=0.211 Sum_probs=77.4
Q ss_pred cccEEEEeEEEeCC--CCCCCCCceeeecceeEEEEceEEec-CCceEEe-CCCceeEEEEeeeecCCC-----------
Q 012057 239 CEGVMIDKLSISSP--KLSPNTDGIHIENTKSVGIYNSMISN-GDDCISI-GTGCSDVDIADVTCGPSH----------- 303 (472)
Q Consensus 239 ~~nv~I~~~~i~~~--~~~~n~DGI~i~~s~nV~I~n~~i~~-gDD~I~i-~s~s~nI~I~n~~~~~~~----------- 303 (472)
++||.|+|++|+.. ....+.|+|.+.++++|+|++|.+.. +|..+.. ..++.+|+|+||.|.+..
T Consensus 132 a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~ 211 (359)
T 1idk_A 132 AENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHY 211 (359)
T ss_dssp CEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBS
T ss_pred CCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCcccccccCcccc
Confidence 44555555555431 11125699999999999999999986 6666665 445899999999997421
Q ss_pred --cceecccCccCCCCcEEEEEEEeEEEecCCc-eEEEEeecCCCceeeeEEEEeEEEEcc-CeeEEEEeeccCCccccC
Q 012057 304 --GISIGSLGAHYSQACVSNITVRNAIIRESDN-GLRIKTWQGGTGCVSDLSFENIQMENV-RNCINIDQYYCLSKECLN 379 (472)
Q Consensus 304 --gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~-gi~I~~~~g~~g~v~nI~f~Ni~~~~v-~~~i~I~~~~~~~~~~~~ 379 (472)
++-+|+ ..+|++.++.+.+... .-+++ .+ ..+.+.|..+.+. .+++.+.
T Consensus 212 ~~~~L~G~---------sd~vT~hhN~f~~~~~R~Pr~r---~g----~~~hv~NN~~~n~~~~~i~~~----------- 264 (359)
T 1idk_A 212 WAIYLDGD---------ADLVTMKGNYIYHTSGRSPKVQ---DN----TLLHAVNNYWYDISGHAFEIG----------- 264 (359)
T ss_dssp CCEEECCS---------SCEEEEESCEEESBCSCTTEEC---TT----CEEEEESCEEEEEEEEEEEEC-----------
T ss_pred ceEEEEec---------CCCeEEEceEeecCcccCcccc---CC----ceEEEECCEEecccceEEecc-----------
Confidence 122222 1389999999986521 11221 11 1244555555443 2344332
Q ss_pred CCCceEEEeEEEEeEE
Q 012057 380 QTSAVFVTGITYRNIK 395 (472)
Q Consensus 380 ~~~~~~i~nI~f~nI~ 395 (472)
....+.+++=.|++.+
T Consensus 265 ~~~~i~~e~N~F~~~~ 280 (359)
T 1idk_A 265 EGGYVLAEGNVFQNVD 280 (359)
T ss_dssp TTCEEEEESCEEEEEE
T ss_pred CCcEEEEEccEEECCC
Confidence 2255677777777776
No 48
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.46 E-value=1.7e-06 Score=88.48 Aligned_cols=118 Identities=16% Similarity=0.266 Sum_probs=87.1
Q ss_pred EEEeeeeEEEece----EEecCCCCeeeeeccccEEEEeEEEeCCCC---------------CCCCCceeeecceeEEEE
Q 012057 212 RFFMSSNLVVSGL----TIQNSPQFHMKFDGCEGVMIDKLSISSPKL---------------SPNTDGIHIENTKSVGIY 272 (472)
Q Consensus 212 ~~~~~~nv~I~~v----~i~ns~~~~i~~~~~~nv~I~~~~i~~~~~---------------~~n~DGI~i~~s~nV~I~ 272 (472)
.+.-.+|.+|.|. +|.. ..|.+..++||.|+|++|..... ..+.|+|.+.+++||+|+
T Consensus 127 ~i~v~snkTI~G~G~~~~i~g---~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWID 203 (416)
T 1vbl_A 127 MVYVGSNTSIIGVGKDAKIKG---GGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWID 203 (416)
T ss_dssp EEECCSSEEEEECTTCCEEES---CEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEE
T ss_pred EEEeCCCeeEEecCCCeEEec---CEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEE
Confidence 4444567777654 4442 46778889999999999986421 135699999999999999
Q ss_pred ceEEecC------------------CceEEeCCCceeEEEEeeeecCC-CcceecccCccCCCCcEEEEEEEeEEEecC
Q 012057 273 NSMISNG------------------DDCISIGTGCSDVDIADVTCGPS-HGISIGSLGAHYSQACVSNITVRNAIIRES 332 (472)
Q Consensus 273 n~~i~~g------------------DD~I~i~s~s~nI~I~n~~~~~~-~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~ 332 (472)
+|.|..+ |..+.++.++.+|+|+||+|... .++-||+...+....+-.+|+|.++.+.+.
T Consensus 204 Hcs~s~~~~~d~~~~~~~Gr~~~~~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~ 282 (416)
T 1vbl_A 204 HNTFTDGDHPDRSLGTYFGRPFQQHDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNV 282 (416)
T ss_dssp SCEEECTTCCGGGSCEETTEECCCCCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEE
T ss_pred ccEEecCCCcccccccccCcceeecccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCC
Confidence 9999964 66788887899999999999873 467777643221112234799999999765
No 49
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.46 E-value=3.2e-05 Score=76.92 Aligned_cols=132 Identities=11% Similarity=0.085 Sum_probs=94.9
Q ss_pred EEEEEeeeeEEEeceEEecC-----------CCCeeeeeccccEEEEeEEEeCCCCCCCCCc-eeee-cceeEEEEceEE
Q 012057 210 LIRFFMSSNLVVSGLTIQNS-----------PQFHMKFDGCEGVMIDKLSISSPKLSPNTDG-IHIE-NTKSVGIYNSMI 276 (472)
Q Consensus 210 ~i~~~~~~nv~I~~v~i~ns-----------~~~~i~~~~~~nv~I~~~~i~~~~~~~n~DG-I~i~-~s~nV~I~n~~i 276 (472)
.|.+.+++||.|++|+|++. ....|.+..+++|.|++|+|... .|| +++. .+.+|+|+||.|
T Consensus 84 Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~-----~Dg~idi~~~s~~vTISnn~f 158 (340)
T 3zsc_A 84 GLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNG-----NDGAVDIKKYSNYITVSWNKF 158 (340)
T ss_dssp EEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEESC-----SSCSEEEETTCEEEEEESCEE
T ss_pred ceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeeccC-----CccceEEecCCceEEEECcEe
Confidence 35667889999999999875 23348999999999999999974 477 7776 689999999999
Q ss_pred ecCCceEEeCCCc----------eeEEEEeeeecCC--CcceecccCccCCCCcEEEEEEEeEEEec----------C-C
Q 012057 277 SNGDDCISIGTGC----------SDVDIADVTCGPS--HGISIGSLGAHYSQACVSNITVRNAIIRE----------S-D 333 (472)
Q Consensus 277 ~~gDD~I~i~s~s----------~nI~I~n~~~~~~--~gi~iGs~~~~~~~~~i~nI~i~n~~i~~----------~-~ 333 (472)
...+-+.-++... .+|++.++.+... +.=++. .+ .+++-|+.+.+ - .
T Consensus 159 ~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r-------~G---~~Hv~NN~~~n~~~~~~~~~~~~~ 228 (340)
T 3zsc_A 159 VDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIR-------FG---MAHVFNNFYSMGLRTGVSGNVFPI 228 (340)
T ss_dssp ESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESCCBCTTEEE-------SS---EEEEESCEEECCCCCSCSSCCSCC
T ss_pred ccCceeeEeCcCCCCccccccCCcEEEEECeEecCCCCCCCccc-------CC---eEEEEccEEECCccccccccceee
Confidence 9866655566521 3799999999763 222221 11 56899999998 2 1
Q ss_pred ceEEEEeecCCCceeeeEEEEeEEEEccCe
Q 012057 334 NGLRIKTWQGGTGCVSDLSFENIQMENVRN 363 (472)
Q Consensus 334 ~gi~I~~~~g~~g~v~nI~f~Ni~~~~v~~ 363 (472)
+++.. ..+ ..|.+|+..+++++.
T Consensus 229 yai~~--~~~-----a~i~~E~N~F~~~~~ 251 (340)
T 3zsc_A 229 YGVAS--AMG-----AKVHVEGNYFMGYGA 251 (340)
T ss_dssp EEEEE--ETT-----CEEEEESCEEECSCH
T ss_pred eeEec--CCC-----CEEEEECcEEECCCc
Confidence 23332 222 357788888888776
No 50
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.41 E-value=1.8e-05 Score=79.57 Aligned_cols=132 Identities=16% Similarity=0.206 Sum_probs=77.9
Q ss_pred cccEEEEeEEEeCCC--CCCCCCceeeecceeEEEEceEEec-CCceEE-eCCCceeEEEEeeeecCC----------C-
Q 012057 239 CEGVMIDKLSISSPK--LSPNTDGIHIENTKSVGIYNSMISN-GDDCIS-IGTGCSDVDIADVTCGPS----------H- 303 (472)
Q Consensus 239 ~~nv~I~~~~i~~~~--~~~n~DGI~i~~s~nV~I~n~~i~~-gDD~I~-i~s~s~nI~I~n~~~~~~----------~- 303 (472)
++||.|+|++|+... .....|||.+.++++|+|++|.+.. +|..+. ...++.+|+|+||+|... |
T Consensus 132 a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~~s~~~~G~H~ 211 (359)
T 1qcx_A 132 AKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHY 211 (359)
T ss_dssp CCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBBS
T ss_pred CCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCccccccCccccc
Confidence 444444444444321 1124699999999999999999986 455553 344689999999999752 1
Q ss_pred -c-ceecccCccCCCCcEEEEEEEeEEEecCCc-eEEEEeecCCCceeeeEEEEeEEEEccC-eeEEEEeeccCCccccC
Q 012057 304 -G-ISIGSLGAHYSQACVSNITVRNAIIRESDN-GLRIKTWQGGTGCVSDLSFENIQMENVR-NCINIDQYYCLSKECLN 379 (472)
Q Consensus 304 -g-i~iGs~~~~~~~~~i~nI~i~n~~i~~~~~-gi~I~~~~g~~g~v~nI~f~Ni~~~~v~-~~i~I~~~~~~~~~~~~ 379 (472)
+ +-+|+ ..++++.++.+.+... .-+++. + ..+.+.|..+.+.. +++...
T Consensus 212 ~~~~l~G~---------sd~vT~~~N~f~~~~~R~Pr~r~---~----~~~hv~NN~~~n~~~~a~~~~----------- 264 (359)
T 1qcx_A 212 WGVYLDGS---------NDMVTLKGNYFYNLSGRMPKVQG---N----TLLHAVNNLFHNFDGHAFEIG----------- 264 (359)
T ss_dssp CCEEECCS---------SEEEEEESCEEESBCSCTTEECS---S----EEEEEESCEEEEEEEEEEEEC-----------
T ss_pred ceeEEecC---------CCCeehcccEeccCcccCceecC---C----ceEEEEccEEECccCeEEecC-----------
Confidence 1 22222 1488999998876532 112210 0 12445555554432 333322
Q ss_pred CCCceEEEeEEEEeEEEE
Q 012057 380 QTSAVFVTGITYRNIKGT 397 (472)
Q Consensus 380 ~~~~~~i~nI~f~nI~~t 397 (472)
....+.+++=.|++..-.
T Consensus 265 ~~~~i~~e~N~F~~~~~~ 282 (359)
T 1qcx_A 265 TGGYVLAEGNVFQDVNVV 282 (359)
T ss_dssp TTEEEEEESCEEEEEEEE
T ss_pred CCceEEEEeeEEECCCcc
Confidence 235677888888887743
No 51
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=98.38 E-value=0.00011 Score=70.23 Aligned_cols=169 Identities=18% Similarity=0.240 Sum_probs=117.7
Q ss_pred CceEEeeeecccCCCCcchHHHHHHHHHHHhhcCCcEEEecCCcEEEEeeeeecCCCCCceEEEeCc--eEeCCCCCCCC
Q 012057 75 DCIFDVRDYGAVGDGSADDTAAFRAAWKAACAVEAGVVLAPSDYVFKITSTIFSGPCKPGLVFQLDG--VLMPPDGPDTW 152 (472)
Q Consensus 75 ~~~~~V~dfGA~gDG~tDdT~Aiq~Ai~~a~~~~g~~V~iP~G~ty~i~~~~l~gp~~s~v~l~~~G--tl~~~~~~~~~ 152 (472)
++++.+++|||.+|-.+||+++|.+.+.. ...|++|.| +|....+.+ +.+-|+..| +|..-+..
T Consensus 62 arvls~k~fga~~~~~~d~~~~~~~sl~s-----~~~v~i~~g-vf~ss~i~~-----~~c~l~g~g~g~~~~~~~~--- 127 (542)
T 2x3h_A 62 ARVLTSKPFGAAGDATTDDTEVIAASLNS-----QKAVTISDG-VFSSSGINS-----NYCNLDGRGSGVLSHRSST--- 127 (542)
T ss_dssp HHBCBSSCTTCCCBSSSCCHHHHHHHHTS-----SSCEECCSE-EEEECCEEE-----SCCEEECTTTEEEEECSSS---
T ss_pred heeeecccccccCCcccCcHHHHHhhhcc-----cccEecccc-ccccccccc-----ccccccccCCceeeeecCC---
Confidence 46778899999999999999999999974 345999999 898887765 567788764 67543322
Q ss_pred CCCCCCceEEEEE-----eecCcEEEeeeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEeeeeEEEeceEEe
Q 012057 153 PKADSRKQWLVFY-----KLDDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNLVVSGLTIQ 227 (472)
Q Consensus 153 ~~~~~~~~~i~~~-----~~~nvtI~G~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~~~nv~I~~v~i~ 227 (472)
...+.|. ..++++|.|. ... .....+.+.|..-.+++++++.+.
T Consensus 128 ------gn~lvfn~p~~g~ls~~ti~~n------k~~-------------------ds~qg~qvs~~gg~dvsv~~i~fs 176 (542)
T 2x3h_A 128 ------GNYLVFNNPRTGRLSNITVESN------KAT-------------------DTTQGQQVSLAGGSDVTVSDVNFS 176 (542)
T ss_dssp ------SCCEEEESCEEEEEEEEEEECC------CSS-------------------TTCBCCSEEEESCEEEEEEEEEEE
T ss_pred ------CCEEEEeCCCCcceeeEEEecc------cCC-------------------ccccceEEEecCCCcceEeeeeee
Confidence 2224443 3566666662 111 001124588999999999999999
Q ss_pred cCCCCeeeeecc------ccEEEEeEEEeCCCCCCCCC--ceeeecceeEEEEceEEec--CCceEEeCCC
Q 012057 228 NSPQFHMKFDGC------EGVMIDKLSISSPKLSPNTD--GIHIENTKSVGIYNSMISN--GDDCISIGTG 288 (472)
Q Consensus 228 ns~~~~i~~~~~------~nv~I~~~~i~~~~~~~n~D--GI~i~~s~nV~I~n~~i~~--gDD~I~i~s~ 288 (472)
|....++.+... +...|++++=.-..+..|.- .+-++++.|.+|++...++ .-.++.++..
T Consensus 177 n~~g~gfsliayp~~~~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~nypqfgavelk~~ 247 (542)
T 2x3h_A 177 NVKGTGFSLIAYPNDAPPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFGAVELKGT 247 (542)
T ss_dssp EECSBEEEEEEECSSSCCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTEEEEEETT
T ss_pred ecCCCceeEEEcCCCCCCCceEEeccccceeccccccccceEEeccchhhhhhhhhhhcCCccceEEeecc
Confidence 877766655432 45678888766544433322 3455789999999999998 4567877774
No 52
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=98.38 E-value=2.7e-06 Score=86.63 Aligned_cols=117 Identities=14% Similarity=0.182 Sum_probs=86.1
Q ss_pred EEEeeeeEEEece----EEecCCCCeeeeeccccEEEEeEEEeCCCC---------------CCCCCceeeecceeEEEE
Q 012057 212 RFFMSSNLVVSGL----TIQNSPQFHMKFDGCEGVMIDKLSISSPKL---------------SPNTDGIHIENTKSVGIY 272 (472)
Q Consensus 212 ~~~~~~nv~I~~v----~i~ns~~~~i~~~~~~nv~I~~~~i~~~~~---------------~~n~DGI~i~~s~nV~I~ 272 (472)
.+.-.+|.+|.|. +|.. ..|.+.. +||.|+|++|..... ..+.|+|.+.+++||+|+
T Consensus 122 ~i~v~snkTI~G~G~~~~i~g---~gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWID 197 (399)
T 2o04_A 122 MVDIPANTTIVGSGTNAKVVG---GNFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWID 197 (399)
T ss_dssp EEECCSSEEEEESSSCCEEES---CEEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEE
T ss_pred EEEeCCCceEEeccCCeEEee---CEEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEE
Confidence 4444567777654 4543 4577777 999999999986421 135799999999999999
Q ss_pred ceEEecC------------------CceEEeCCCceeEEEEeeeecCC-CcceecccCccCCCCcEEEEEEEeEEEecC
Q 012057 273 NSMISNG------------------DDCISIGTGCSDVDIADVTCGPS-HGISIGSLGAHYSQACVSNITVRNAIIRES 332 (472)
Q Consensus 273 n~~i~~g------------------DD~I~i~s~s~nI~I~n~~~~~~-~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~ 332 (472)
+|.|..+ |..+.++.++.+|+|+||+|... .++-||+...+....+-.+|+|.++.+.+.
T Consensus 198 Hcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~ 276 (399)
T 2o04_A 198 HCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNI 276 (399)
T ss_dssp SCEEECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEE
T ss_pred eeeeecCCCccccccccccceeeccccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCC
Confidence 9999964 66788888899999999999873 467777642211112234899999999765
No 53
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.30 E-value=2.6e-05 Score=78.04 Aligned_cols=131 Identities=14% Similarity=0.114 Sum_probs=94.7
Q ss_pred EEEEEeeeeEEEeceEEecCC----------------------CCeeeeeccccEEEEeEEEeCCCCCCCCCce-ee-ec
Q 012057 210 LIRFFMSSNLVVSGLTIQNSP----------------------QFHMKFDGCEGVMIDKLSISSPKLSPNTDGI-HI-EN 265 (472)
Q Consensus 210 ~i~~~~~~nv~I~~v~i~ns~----------------------~~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI-~i-~~ 265 (472)
.|.+..++||.|++|+|.+.. .-.|.+.++++|.|++|+|... .||+ ++ ..
T Consensus 107 gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~~-----~Dg~id~~~~ 181 (346)
T 1pxz_A 107 CLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSDC-----SDGLIDVTLG 181 (346)
T ss_dssp CEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEECC-----SSEEEEEESS
T ss_pred eEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEecC-----CCCcEeeccC
Confidence 356677888888998887641 2348899999999999999973 5886 66 58
Q ss_pred ceeEEEEceEEecCCceEEeCCC-------ceeEEEEeeee-cCC--CcceecccCccCCCCcEEEEEEEeEEEecCC-c
Q 012057 266 TKSVGIYNSMISNGDDCISIGTG-------CSDVDIADVTC-GPS--HGISIGSLGAHYSQACVSNITVRNAIIRESD-N 334 (472)
Q Consensus 266 s~nV~I~n~~i~~gDD~I~i~s~-------s~nI~I~n~~~-~~~--~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~-~ 334 (472)
+.+|+|+||.|...+.++-+++. ..+|++.++.+ .+. +.-.+.. ..++|.|+++.+-. +
T Consensus 182 s~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~R~Pr~r~----------g~~hv~NN~~~~~~~~ 251 (346)
T 1pxz_A 182 STGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARY----------GLVHVANNNYDPWNIY 251 (346)
T ss_dssp CEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTEEES----------SEEEEESCEECCCSSC
T ss_pred cceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEeCCccccCccEec----------ceEEEEeeEEEcccce
Confidence 99999999999987777777653 23899999999 542 3333311 27889999998743 4
Q ss_pred eEEEEeecCCCceeeeEEEEeEEEEccC
Q 012057 335 GLRIKTWQGGTGCVSDLSFENIQMENVR 362 (472)
Q Consensus 335 gi~I~~~~g~~g~v~nI~f~Ni~~~~v~ 362 (472)
++.... -..+.+|+..++...
T Consensus 252 ~i~~~~-------~~~i~~egN~F~~~~ 272 (346)
T 1pxz_A 252 AIGGSS-------NPTILSEGNSFTAPS 272 (346)
T ss_dssp SEEEES-------CCEEEEESCEEECCS
T ss_pred EEeccC-------CceEEEECCEEECCC
Confidence 543321 245778888887654
No 54
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=98.27 E-value=7.7e-06 Score=82.23 Aligned_cols=114 Identities=25% Similarity=0.335 Sum_probs=83.0
Q ss_pred eeeEEEece----EEecCCCCeeee---eccccEEEEeEEEeCCCC-----------CCCCCceeeec-ceeEEEEceEE
Q 012057 216 SSNLVVSGL----TIQNSPQFHMKF---DGCEGVMIDKLSISSPKL-----------SPNTDGIHIEN-TKSVGIYNSMI 276 (472)
Q Consensus 216 ~~nv~I~~v----~i~ns~~~~i~~---~~~~nv~I~~~~i~~~~~-----------~~n~DGI~i~~-s~nV~I~n~~i 276 (472)
.+|.+|.|. +|.+ ..|.+ ..++||.|+|++|..... ..+.|+|.+.+ ++||+|++|.|
T Consensus 86 ~snkTI~G~G~~~~i~g---~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~ 162 (361)
T 1pe9_A 86 PANTTVIGLGTDAKFIN---GSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTI 162 (361)
T ss_dssp CSSEEEEECTTCCEEES---SEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEE
T ss_pred cCCcEEEccCCCeEEec---CEEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEe
Confidence 456676653 4442 45777 688999999999986421 13579999999 99999999999
Q ss_pred ecC------------------CceEEeCCCceeEEEEeeeecC-CCcceecccCccC-CCCcEEEEEEEeEEEecC
Q 012057 277 SNG------------------DDCISIGTGCSDVDIADVTCGP-SHGISIGSLGAHY-SQACVSNITVRNAIIRES 332 (472)
Q Consensus 277 ~~g------------------DD~I~i~s~s~nI~I~n~~~~~-~~gi~iGs~~~~~-~~~~i~nI~i~n~~i~~~ 332 (472)
..+ |..|.++.++.+|+|+||+|.. ..++-+|+.-.+. ...+--+|++.++.+.+.
T Consensus 163 s~~~~~~~~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 163 SDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp ECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEE
T ss_pred ecccccccccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCc
Confidence 964 6678898889999999999987 3467777632110 001224899999999765
No 55
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.20 E-value=2.5e-05 Score=78.33 Aligned_cols=140 Identities=16% Similarity=0.155 Sum_probs=95.5
Q ss_pred EEEEEeeeeEEEeceEEecCCC-----CeeeeeccccEEEEeEEEeCCCCC--------CCCCc-eeee-cceeEEEEce
Q 012057 210 LIRFFMSSNLVVSGLTIQNSPQ-----FHMKFDGCEGVMIDKLSISSPKLS--------PNTDG-IHIE-NTKSVGIYNS 274 (472)
Q Consensus 210 ~i~~~~~~nv~I~~v~i~ns~~-----~~i~~~~~~nv~I~~~~i~~~~~~--------~n~DG-I~i~-~s~nV~I~n~ 274 (472)
.|.+..++||.|++|+|...+. ..|.+..+++|.|++|.|...... ...|| +++. .+.+|+|+||
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn 183 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYN 183 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESC
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEee
Confidence 5778899999999999996542 358999999999999999853211 11266 5664 7899999999
Q ss_pred EEecCCceEEeCCC----ceeEEEEeeeecCC--CcceecccCccCCCCcEEEEEEEeEEEecCC-ceEEEEeecCCCce
Q 012057 275 MISNGDDCISIGTG----CSDVDIADVTCGPS--HGISIGSLGAHYSQACVSNITVRNAIIRESD-NGLRIKTWQGGTGC 347 (472)
Q Consensus 275 ~i~~gDD~I~i~s~----s~nI~I~n~~~~~~--~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~-~gi~I~~~~g~~g~ 347 (472)
.|...+-..-+++. ..+|++.++.+... +.-++. . -.+++.|+++.+.. +++... .+
T Consensus 184 ~f~~h~k~~LiG~sd~~~g~~vT~hhN~f~~~~~R~Pr~r-------~---G~~Hv~NN~~~n~~~~~~~~~--~~---- 247 (353)
T 1air_A 184 YIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARLPLQR-------G---GLVHAYNNLYTNITGSGLNVR--QN---- 247 (353)
T ss_dssp EEEEEEECCEESSSTTCCCCEEEEESCEEEEEEECSCEEE-------S---SEEEEESCEEEEESSCSEEEE--TT----
T ss_pred EEcCCCceeEECCCcCCCCceEEEEceEEcCCcCCCCCCc-------C---ceEEEEccEEECCCCceeccC--CC----
Confidence 99864433334442 15799999998652 332331 1 15778888888643 455432 12
Q ss_pred eeeEEEEeEEEEccCeeEE
Q 012057 348 VSDLSFENIQMENVRNCIN 366 (472)
Q Consensus 348 v~nI~f~Ni~~~~v~~~i~ 366 (472)
..|.+|+..+++...|+.
T Consensus 248 -~~i~~e~N~F~~~~~p~~ 265 (353)
T 1air_A 248 -GQALIENNWFEKAINPVT 265 (353)
T ss_dssp -CEEEEESCEEEEEESSEE
T ss_pred -cEEEEEceEEECCCCceE
Confidence 246777777777777763
No 56
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.20 E-value=2.7e-05 Score=78.22 Aligned_cols=135 Identities=13% Similarity=0.157 Sum_probs=78.1
Q ss_pred EEEE-eeeeEEEeceEEecC------CCCeeeeeccccEEEEeEEEeCCCCCCCCCcee---eecceeEEEEceEEecCC
Q 012057 211 IRFF-MSSNLVVSGLTIQNS------PQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIH---IENTKSVGIYNSMISNGD 280 (472)
Q Consensus 211 i~~~-~~~nv~I~~v~i~ns------~~~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~---i~~s~nV~I~n~~i~~gD 280 (472)
|.+. .++||.|++|+|++. ....|.+..+++|.|++|++... .|+.. ...+.+|+|+||.|...+
T Consensus 126 l~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~-----~d~~~~~g~~~s~~VTISnn~f~~~~ 200 (359)
T 1idk_A 126 LRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARI-----GRQHYVLGTSADNRVSLTNNYIDGVS 200 (359)
T ss_dssp EEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEE-----SSCSEEECCCTTCEEEEESCEEECBC
T ss_pred EEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecC-----CCCcEEecccCcceEEEECcEecCCc
Confidence 6666 677888888888763 12347777788888888887753 24433 346778888888886422
Q ss_pred ---------c--eEEeCCCceeEEEEeeeecCC--CcceecccCccCCCCcEEEEEEEeEEEecC-CceEEEEeecCCCc
Q 012057 281 ---------D--CISIGTGCSDVDIADVTCGPS--HGISIGSLGAHYSQACVSNITVRNAIIRES-DNGLRIKTWQGGTG 346 (472)
Q Consensus 281 ---------D--~I~i~s~s~nI~I~n~~~~~~--~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~-~~gi~I~~~~g~~g 346 (472)
+ ...+...+.+|++.++.+... +.=++. .-+.+++.|+++.+. .+++.+. .
T Consensus 201 ~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~R~Pr~r---------~g~~~hv~NN~~~n~~~~~i~~~--~---- 265 (359)
T 1idk_A 201 DYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKVQ---------DNTLLHAVNNYWYDISGHAFEIG--E---- 265 (359)
T ss_dssp SCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEEC---------TTCEEEEESCEEEEEEEEEEEEC--T----
T ss_pred ccccccCccccceEEEEecCCCeEEEceEeecCcccCcccc---------CCceEEEECCEEecccceEEecc--C----
Confidence 1 223332256788888877642 111110 012577777777663 2343331 1
Q ss_pred eeeeEEEEeEEEEccCeeEE
Q 012057 347 CVSDLSFENIQMENVRNCIN 366 (472)
Q Consensus 347 ~v~nI~f~Ni~~~~v~~~i~ 366 (472)
-..|.+|+..+++.+.|+.
T Consensus 266 -~~~i~~e~N~F~~~~~p~~ 284 (359)
T 1idk_A 266 -GGYVLAEGNVFQNVDTVLE 284 (359)
T ss_dssp -TCEEEEESCEEEEEEEEEE
T ss_pred -CcEEEEEccEEECCCCcee
Confidence 1346667776666655543
No 57
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=98.17 E-value=0.0001 Score=72.98 Aligned_cols=131 Identities=15% Similarity=0.246 Sum_probs=82.1
Q ss_pred eeeeEEEeceEEecCCC------CeeeeeccccEEEEeEEEeCCCCCCCCCceeeecceeEEEEceEEecCCceEEeCCC
Q 012057 215 MSSNLVVSGLTIQNSPQ------FHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYNSMISNGDDCISIGTG 288 (472)
Q Consensus 215 ~~~nv~I~~v~i~ns~~------~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~gDD~I~i~s~ 288 (472)
..++++++||+|+|+.. -.+.+ .++++.|++|+|.. +.|++.....+ ..++||.|...-|-|- +.
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r-~~~~~c~I~G~vDFIf-G~- 162 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILA-----YQDSLYVHSNR-QFFINCFIAGTVDFIF-GN- 162 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEEC-----STTCEEECSSE-EEEESCEEEESSSCEE-ES-
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECc-----cceeeeecCcc-EEEEecEEEeeeeEEe-cC-
Confidence 47899999999998642 12444 57888899999887 34778877655 4888998887666553 33
Q ss_pred ceeEEEEeeeecCC------Cc-ceecccCccCCCCcEEEEEEEeEEEecCCc--------eEEEE-eecCCCceeeeEE
Q 012057 289 CSDVDIADVTCGPS------HG-ISIGSLGAHYSQACVSNITVRNAIIRESDN--------GLRIK-TWQGGTGCVSDLS 352 (472)
Q Consensus 289 s~nI~I~n~~~~~~------~g-i~iGs~~~~~~~~~i~nI~i~n~~i~~~~~--------gi~I~-~~~g~~g~v~nI~ 352 (472)
....++||++..- .+ |..- ++ .+...-..+.|.||++..... ...+. .|. .-..+.
T Consensus 163 -~~a~f~~c~i~~~~~~~~~~~~itA~--~r-~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~----~~sr~v 234 (319)
T 1gq8_A 163 -AAVVLQDCDIHARRPGSGQKNMVTAQ--GR-TDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWK----EYSRTV 234 (319)
T ss_dssp -CEEEEESCEEEECCCSTTCCEEEEEE--CC-CSTTCCCEEEEESCEEEECTTTGGGGGGSCEEEECCSS----TTCEEE
T ss_pred -CcEEEEeeEEEEecCCCCCceEEEeC--CC-CCCCCCceEEEECCEEecCCCccccccceeEEecccCC----CcceEE
Confidence 3578888887641 11 2221 10 012233467788888876532 23332 222 234678
Q ss_pred EEeEEEEccC
Q 012057 353 FENIQMENVR 362 (472)
Q Consensus 353 f~Ni~~~~v~ 362 (472)
|.|..|.+.-
T Consensus 235 ~~~t~~~~~I 244 (319)
T 1gq8_A 235 VMQSSITNVI 244 (319)
T ss_dssp EESCEECTTB
T ss_pred EEeccCCCcc
Confidence 8888887653
No 58
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.15 E-value=6.5e-05 Score=75.54 Aligned_cols=136 Identities=12% Similarity=0.088 Sum_probs=91.7
Q ss_pred EEEEE-eeeeEEEeceEEecCCC------CeeeeeccccEEEEeEEEeCCCCCCCCCcee---eecceeEEEEceEEecC
Q 012057 210 LIRFF-MSSNLVVSGLTIQNSPQ------FHMKFDGCEGVMIDKLSISSPKLSPNTDGIH---IENTKSVGIYNSMISNG 279 (472)
Q Consensus 210 ~i~~~-~~~nv~I~~v~i~ns~~------~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~---i~~s~nV~I~n~~i~~g 279 (472)
.|.+. .++||.|++|+|++... ..|.+..+++|.|++|+|... .|+.. ...+.+|+|+||.|...
T Consensus 125 gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~-----~d~~~~~~~~~s~~vTISnn~f~~~ 199 (359)
T 1qcx_A 125 GLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARI-----GRQHIVLGTSADNRVTISYSLIDGR 199 (359)
T ss_dssp CEEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEE-----SSCSEEECSSCCEEEEEESCEEECB
T ss_pred eEEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeecc-----CcCceeecccccccEEEECcEecCC
Confidence 37777 88999999999987532 358888999999999999863 34433 34789999999999842
Q ss_pred C-----------ceEEeCCCceeEEEEeeeecCC--CcceecccCccCCCCcEEEEEEEeEEEecCC-ceEEEEeecCCC
Q 012057 280 D-----------DCISIGTGCSDVDIADVTCGPS--HGISIGSLGAHYSQACVSNITVRNAIIRESD-NGLRIKTWQGGT 345 (472)
Q Consensus 280 D-----------D~I~i~s~s~nI~I~n~~~~~~--~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~-~gi~I~~~~g~~ 345 (472)
. ....+...+.+|++.++.+... +.=++. .-..+++.|+++.+.. +++...
T Consensus 200 ~~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R~Pr~r---------~~~~~hv~NN~~~n~~~~a~~~~------ 264 (359)
T 1qcx_A 200 SDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQ---------GNTLLHAVNNLFHNFDGHAFEIG------ 264 (359)
T ss_dssp CSSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEEC---------SSEEEEEESCEEEEEEEEEEEEC------
T ss_pred ccccccCcccccceeEEecCCCCeehcccEeccCcccCceec---------CCceEEEEccEEECccCeEEecC------
Confidence 1 1333333367899999988752 222221 1136888999888741 333321
Q ss_pred ceeeeEEEEeEEEEccCeeEE
Q 012057 346 GCVSDLSFENIQMENVRNCIN 366 (472)
Q Consensus 346 g~v~nI~f~Ni~~~~v~~~i~ 366 (472)
.-..|.+|+..+++..+|+.
T Consensus 265 -~~~~i~~e~N~F~~~~~~~~ 284 (359)
T 1qcx_A 265 -TGGYVLAEGNVFQDVNVVVE 284 (359)
T ss_dssp -TTEEEEEESCEEEEEEEEEC
T ss_pred -CCceEEEEeeEEECCCcccC
Confidence 12467888888887776653
No 59
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=98.13 E-value=9.3e-05 Score=73.16 Aligned_cols=131 Identities=13% Similarity=0.206 Sum_probs=78.9
Q ss_pred eeeeEEEeceEEecCCC------CeeeeeccccEEEEeEEEeCCCCCCCCCceeeecceeEEEEceEEecCCceEEeCCC
Q 012057 215 MSSNLVVSGLTIQNSPQ------FHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYNSMISNGDDCISIGTG 288 (472)
Q Consensus 215 ~~~nv~I~~v~i~ns~~------~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~gDD~I~i~s~ 288 (472)
..++++++||+|+|+.. -.+.+ .++.+.|++|+|.. +.|++.....+ -.++||.|...-|-|- +.
T Consensus 88 ~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r-~~~~~c~I~G~vDFIf-G~- 158 (317)
T 1xg2_A 88 VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDA-----YQDTLYAHSQR-QFYRDSYVTGTVDFIF-GN- 158 (317)
T ss_dssp CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEEC-----STTCEEECSSE-EEEESCEEEESSSCEE-EC-
T ss_pred ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCc-----cccceeecCcc-EEEEeeEEEeceeEEc-CC-
Confidence 68899999999998742 12444 47778888888887 34777777654 4788888887666543 33
Q ss_pred ceeEEEEeeeecCC------Cc-ceecccCccCCCCcEEEEEEEeEEEecCCc--------eEEEE-eecCCCceeeeEE
Q 012057 289 CSDVDIADVTCGPS------HG-ISIGSLGAHYSQACVSNITVRNAIIRESDN--------GLRIK-TWQGGTGCVSDLS 352 (472)
Q Consensus 289 s~nI~I~n~~~~~~------~g-i~iGs~~~~~~~~~i~nI~i~n~~i~~~~~--------gi~I~-~~~g~~g~v~nI~ 352 (472)
....++||++..- .+ |..- ++ .+...-..+.|.||++..... ...+. .|. .-..+.
T Consensus 159 -~~avf~~c~i~~~~~~~~~~~~itA~--~r-~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~----~~sr~v 230 (317)
T 1xg2_A 159 -AAVVFQKCQLVARKPGKYQQNMVTAQ--GR-TDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWK----EYSRTV 230 (317)
T ss_dssp -CEEEEESCEEEECCCSTTCCEEEEEE--CC-CCTTSCCEEEEESCEEEECTTTGGGTTTSCEEEECCSS----TTCEEE
T ss_pred -ceEEEeeeEEEEeccCCCCccEEEec--Cc-CCCCCCcEEEEECCEEecCCCccccccceeEEeecccC----CCceEE
Confidence 3477888887541 11 2221 10 011223466788888875431 23332 222 224577
Q ss_pred EEeEEEEccC
Q 012057 353 FENIQMENVR 362 (472)
Q Consensus 353 f~Ni~~~~v~ 362 (472)
|.|..|.+.-
T Consensus 231 ~~~t~~~~~I 240 (317)
T 1xg2_A 231 VMESYLGGLI 240 (317)
T ss_dssp EESCEECTTB
T ss_pred EEecccCCcc
Confidence 8888877653
No 60
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.13 E-value=5.8e-05 Score=75.10 Aligned_cols=140 Identities=14% Similarity=0.162 Sum_probs=96.1
Q ss_pred EEEEE-eeeeEEEeceEEecCC----CCeeeee-----ccccEEEEeEEEeCCCCC------CCCCc-eeee-cceeEEE
Q 012057 210 LIRFF-MSSNLVVSGLTIQNSP----QFHMKFD-----GCEGVMIDKLSISSPKLS------PNTDG-IHIE-NTKSVGI 271 (472)
Q Consensus 210 ~i~~~-~~~nv~I~~v~i~ns~----~~~i~~~-----~~~nv~I~~~~i~~~~~~------~n~DG-I~i~-~s~nV~I 271 (472)
.|.+. .++||.|++|+|.+.. ...|.+. .+++|.|++|+|...... .--|| |++. .+.+|+|
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTI 166 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTV 166 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEE
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEE
Confidence 57777 8999999999999864 3458888 599999999999743210 01154 5765 6899999
Q ss_pred EceEEecCCceEEeCCC-------ceeEEEEeeeecCC--CcceecccCccCCCCcEEEEEEEeEEEecC-CceEEEEee
Q 012057 272 YNSMISNGDDCISIGTG-------CSDVDIADVTCGPS--HGISIGSLGAHYSQACVSNITVRNAIIRES-DNGLRIKTW 341 (472)
Q Consensus 272 ~n~~i~~gDD~I~i~s~-------s~nI~I~n~~~~~~--~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~-~~gi~I~~~ 341 (472)
+||.|...+-+.-++.. ..+|++.++.+... +.=++. .+ .+++.|+++.+. .+++...
T Consensus 167 Snn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f~~~~~R~Pr~r-------~G---~~hv~NN~~~n~~~~~i~~~-- 234 (330)
T 2qy1_A 167 SYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVESRVPLQR-------FG---LSHIYNNYFNNVTTSGINVR-- 234 (330)
T ss_dssp ESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEEEEEEECTTEEE-------SS---EEEEESCEEEEECSCSEEEE--
T ss_pred EcceeccCCeEEEECCCCccccCCCceEEEECcEEcCCCCCCCcee-------cc---eEEEEeeEEEcccceEeccC--
Confidence 99999875555555552 15899999998652 222331 11 478889988775 3455432
Q ss_pred cCCCceeeeEEEEeEEEEccCeeEE
Q 012057 342 QGGTGCVSDLSFENIQMENVRNCIN 366 (472)
Q Consensus 342 ~g~~g~v~nI~f~Ni~~~~v~~~i~ 366 (472)
.+ ..|.+|+..+++.++|+.
T Consensus 235 ~~-----~~i~~e~N~F~~~~~p~~ 254 (330)
T 2qy1_A 235 MG-----GIAKIESNYFENIKNPVT 254 (330)
T ss_dssp TT-----CEEEEESCEEEEEESSEE
T ss_pred CC-----cEEEEEccEEECCCCcee
Confidence 12 356777777777666654
No 61
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.96 E-value=0.00022 Score=72.51 Aligned_cols=112 Identities=11% Similarity=0.162 Sum_probs=79.7
Q ss_pred EEEEEeeeeEEEeceEEecCC-------------------CCeeeeeccccEEEEeEEEeCCCC---------C---CCC
Q 012057 210 LIRFFMSSNLVVSGLTIQNSP-------------------QFHMKFDGCEGVMIDKLSISSPKL---------S---PNT 258 (472)
Q Consensus 210 ~i~~~~~~nv~I~~v~i~ns~-------------------~~~i~~~~~~nv~I~~~~i~~~~~---------~---~n~ 258 (472)
.|.+.. +||.|++|+|++.. ...|.+..+++|.|++|+|..... + .-.
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 467777 99999999997641 234889999999999999986421 0 014
Q ss_pred Cc-eeee-cceeEEEEceEEecCCceEEeCCC--------ceeEEEEeeeecCC--CcceecccCccCCCCcEEEEEEEe
Q 012057 259 DG-IHIE-NTKSVGIYNSMISNGDDCISIGTG--------CSDVDIADVTCGPS--HGISIGSLGAHYSQACVSNITVRN 326 (472)
Q Consensus 259 DG-I~i~-~s~nV~I~n~~i~~gDD~I~i~s~--------s~nI~I~n~~~~~~--~gi~iGs~~~~~~~~~i~nI~i~n 326 (472)
|| |++. .+.+|+|+||.|...+-+.-+++. ..+|++.+|.+.+. +.=++. .+ .+++-|
T Consensus 223 Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~~~R~Pr~R-------~G---~~Hv~N 292 (399)
T 2o04_A 223 DGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQAAPRVR-------FG---QVHVYN 292 (399)
T ss_dssp CCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEEEECTTEES-------SC---EEEEES
T ss_pred ccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCCcccCCCcc-------cc---eEEEEc
Confidence 66 5665 789999999999975555555552 13899999998652 333331 11 488999
Q ss_pred EEEecC
Q 012057 327 AIIRES 332 (472)
Q Consensus 327 ~~i~~~ 332 (472)
+.+.+.
T Consensus 293 N~~~n~ 298 (399)
T 2o04_A 293 NYYEGS 298 (399)
T ss_dssp CEEECC
T ss_pred ceEECC
Confidence 999765
No 62
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.95 E-value=0.0002 Score=73.15 Aligned_cols=135 Identities=13% Similarity=0.119 Sum_probs=90.9
Q ss_pred EEEEEeeeeEEEeceEEecCC-------------------CCeeeeeccccEEEEeEEEeCCCC---------C---CCC
Q 012057 210 LIRFFMSSNLVVSGLTIQNSP-------------------QFHMKFDGCEGVMIDKLSISSPKL---------S---PNT 258 (472)
Q Consensus 210 ~i~~~~~~nv~I~~v~i~ns~-------------------~~~i~~~~~~nv~I~~~~i~~~~~---------~---~n~ 258 (472)
.|++..++||.|++|+|.+.. ...|.+.++++|.|++|+|..... + .-.
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 477788999999999997641 234889999999999999986421 0 114
Q ss_pred Cc-eeee-cceeEEEEceEEecCCceEEeCCCc--------eeEEEEeeeecCC--CcceecccCccCCCCcEEEEEEEe
Q 012057 259 DG-IHIE-NTKSVGIYNSMISNGDDCISIGTGC--------SDVDIADVTCGPS--HGISIGSLGAHYSQACVSNITVRN 326 (472)
Q Consensus 259 DG-I~i~-~s~nV~I~n~~i~~gDD~I~i~s~s--------~nI~I~n~~~~~~--~gi~iGs~~~~~~~~~i~nI~i~n 326 (472)
|| +++. .+.+|+|+||.|...+-+.-+++.. .+|++.+|.+.+. +.=++ +.+ .+++-|
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~~~R~Pr~-------R~G---~~Hv~N 298 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNVTQRLPRV-------RFG---QVHIYN 298 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEEEECSSEE-------SSC---EEEEES
T ss_pred ccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCCccCCccc-------ccc---eEEEEc
Confidence 66 5565 6899999999999755555555421 2699999999652 33333 111 488999
Q ss_pred EEEecCC-------ceEEEEeecCCCceeeeEEEEeEEEEcc
Q 012057 327 AIIRESD-------NGLRIKTWQGGTGCVSDLSFENIQMENV 361 (472)
Q Consensus 327 ~~i~~~~-------~gi~I~~~~g~~g~v~nI~f~Ni~~~~v 361 (472)
+++.+.. +++.. ..+ ..|.+|+..++..
T Consensus 299 N~~~n~~~~~~~~~ya~g~--~~~-----~~i~~E~N~F~~~ 333 (416)
T 1vbl_A 299 NYYEFSNLADYDFQYAWGV--GVF-----SQIYAQNNYFSFD 333 (416)
T ss_dssp CEEEECTTSSSCCCCSEEE--ETT-----CEEEEESCEEEES
T ss_pred ceEECCCCCcccceeEecc--CCC-----cEEEEECCEEECC
Confidence 9997542 23322 111 2466777777654
No 63
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=97.93 E-value=0.00026 Score=71.34 Aligned_cols=131 Identities=8% Similarity=0.154 Sum_probs=100.5
Q ss_pred eeEEEeceEEecC-----C------CCeeeeec-cccEEEEeEEEeCCCCCCCCCceeeecceeEEEEceEEecCCceEE
Q 012057 217 SNLVVSGLTIQNS-----P------QFHMKFDG-CEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYNSMISNGDDCIS 284 (472)
Q Consensus 217 ~nv~I~~v~i~ns-----~------~~~i~~~~-~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~gDD~I~ 284 (472)
++|++++++|.+. . .-+|.+.. .+++.|++++|... .-||.+..+++.+|+|++|.....||.
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~~-----~fGI~l~~a~~~~I~~N~I~e~GNgI~ 210 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVYL-----EHALIVRGADALRVNDNMIAECGNCVE 210 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEESC-----SEEEEETTEESCEEESCEEESSSEEEE
T ss_pred CCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEecc-----cEEEEEccCCCcEEECCEEEecCCcee
Confidence 6777777777665 3 12367765 88899999999984 368999999999999999998888999
Q ss_pred eCCCceeEEEEeeeecCC-Cc--ceecccCccCCCCcEEEEEEEeEEE-ecCCceEEEEeecCCCceeeeEEEEeEEEEc
Q 012057 285 IGTGCSDVDIADVTCGPS-HG--ISIGSLGAHYSQACVSNITVRNAII-RESDNGLRIKTWQGGTGCVSDLSFENIQMEN 360 (472)
Q Consensus 285 i~s~s~nI~I~n~~~~~~-~g--i~iGs~~~~~~~~~i~nI~i~n~~i-~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~ 360 (472)
+...++...|+|+.+... +| |.+. ...+..|+++.+ .+.+.||.+.. ..+..|++.++++
T Consensus 211 L~G~~~~~~I~~N~i~~~~dG~gIyl~---------ns~~~~I~~N~i~~~~R~gIh~m~-------s~~~~i~~N~f~~ 274 (410)
T 2inu_A 211 LTGAGQATIVSGNHMGAGPDGVTLLAE---------NHEGLLVTGNNLFPRGRSLIEFTG-------CNRCSVTSNRLQG 274 (410)
T ss_dssp ECSCEESCEEESCEEECCTTSEEEEEE---------SEESCEEESCEECSCSSEEEEEES-------CBSCEEESCEEEE
T ss_pred eccccccceEecceeeecCCCCEEEEE---------eCCCCEEECCCcccCcceEEEEEc-------cCCCEEECCEEec
Confidence 988788899999999874 45 6662 357788999977 56888999864 3344677777777
Q ss_pred cCeeEEEE
Q 012057 361 VRNCINID 368 (472)
Q Consensus 361 v~~~i~I~ 368 (472)
...++.+.
T Consensus 275 ~~~Gi~~M 282 (410)
T 2inu_A 275 FYPGMLRL 282 (410)
T ss_dssp SSSCSEEE
T ss_pred ceeEEEEE
Confidence 77666654
No 64
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.91 E-value=0.0003 Score=70.67 Aligned_cols=112 Identities=21% Similarity=0.274 Sum_probs=78.8
Q ss_pred EEEE---EeeeeEEEeceEEecCC---------------CCeeeeec-cccEEEEeEEEeCCCCC------------CCC
Q 012057 210 LIRF---FMSSNLVVSGLTIQNSP---------------QFHMKFDG-CEGVMIDKLSISSPKLS------------PNT 258 (472)
Q Consensus 210 ~i~~---~~~~nv~I~~v~i~ns~---------------~~~i~~~~-~~nv~I~~~~i~~~~~~------------~n~ 258 (472)
.|++ ..++||.|++|+|.+.. ...|.+.. +++|.|++|+|...... .-.
T Consensus 104 gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~ 183 (361)
T 1pe9_A 104 SLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQH 183 (361)
T ss_dssp EEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCC
T ss_pred EEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeec
Confidence 4777 67899999999998642 23588999 99999999999864210 013
Q ss_pred Cc-eeee-cceeEEEEceEEecCCceEEeCCC---------ceeEEEEeeeecCC--CcceecccCccCCCCcEEEEEEE
Q 012057 259 DG-IHIE-NTKSVGIYNSMISNGDDCISIGTG---------CSDVDIADVTCGPS--HGISIGSLGAHYSQACVSNITVR 325 (472)
Q Consensus 259 DG-I~i~-~s~nV~I~n~~i~~gDD~I~i~s~---------s~nI~I~n~~~~~~--~gi~iGs~~~~~~~~~i~nI~i~ 325 (472)
|| |++. .+.+|+|.||.|..-+-+.-+++. .-+|++.++.+... +.=++ +.+ .+++.
T Consensus 184 DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~-------R~G---~~Hv~ 253 (361)
T 1pe9_A 184 DGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTERAPRV-------RYG---SIHSF 253 (361)
T ss_dssp CCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEECSSEE-------SSC---EEEEE
T ss_pred cceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCccccCccc-------ccc---eEEEE
Confidence 66 5665 689999999999875545555542 12699999998652 22222 111 37889
Q ss_pred eEEEec
Q 012057 326 NAIIRE 331 (472)
Q Consensus 326 n~~i~~ 331 (472)
|+.+.+
T Consensus 254 NN~~~~ 259 (361)
T 1pe9_A 254 NNVFKG 259 (361)
T ss_dssp SCEEEE
T ss_pred cceEec
Confidence 999864
No 65
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=97.68 E-value=0.0023 Score=63.77 Aligned_cols=134 Identities=14% Similarity=0.190 Sum_probs=81.5
Q ss_pred eeeeEEEeceEEecCCC------------------Ce--ee-eeccccEEEEeEEEeCCCCCCCCCceeeecceeEEEEc
Q 012057 215 MSSNLVVSGLTIQNSPQ------------------FH--MK-FDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYN 273 (472)
Q Consensus 215 ~~~nv~I~~v~i~ns~~------------------~~--i~-~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~n 273 (472)
.++++++++|+|+|+.. .. +. -..++.+.|++|+|... .|.+..... +..++|
T Consensus 94 ~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~-----QDTLy~~~g-r~~~~~ 167 (342)
T 2nsp_A 94 SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGY-----QATLYVSGG-RSFFSD 167 (342)
T ss_dssp CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECS-----TTCEEECSS-EEEEES
T ss_pred ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecc-----cceEEECCC-CEEEEc
Confidence 47899999999998751 11 32 14578889999999873 477877754 688899
Q ss_pred eEEecCCceEEeCCCceeEEEEeeeecCC-C---------c-ceecccCccCCCCcEEEEEEEeEEEecCC-----ceEE
Q 012057 274 SMISNGDDCISIGTGCSDVDIADVTCGPS-H---------G-ISIGSLGAHYSQACVSNITVRNAIIRESD-----NGLR 337 (472)
Q Consensus 274 ~~i~~gDD~I~i~s~s~nI~I~n~~~~~~-~---------g-i~iGs~~~~~~~~~i~nI~i~n~~i~~~~-----~gi~ 337 (472)
|.|...-|-| ++. ....++||++..- . | |.--+. ....-.-+.|.||++.... ....
T Consensus 168 c~I~G~vDFI-FG~--a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~~----~~~~~~G~vf~~c~i~~~~~~~~~~~~y 240 (342)
T 2nsp_A 168 CRISGTVDFI-FGD--GTALFNNCDLVSRYRADVKSGNVSGYLTAPST----NINQKYGLVITNSRVIRESDSVPAKSYG 240 (342)
T ss_dssp CEEEESEEEE-EES--SEEEEESCEEEECCCTTSCTTSCCEEEEEECC----BTTCSCCEEEESCEEEESSTTSCTTCEE
T ss_pred CEEEeceEEE-eCC--ceEEEecCEEEEecCcccccccCceEEEccCC----CCCCCCEEEEEcCEEecCCCCCccccEE
Confidence 9998765544 333 3588888887541 1 2 221111 0111134678899887652 1244
Q ss_pred EE-eecCCC----------ceeeeEEEEeEEEEcc
Q 012057 338 IK-TWQGGT----------GCVSDLSFENIQMENV 361 (472)
Q Consensus 338 I~-~~~g~~----------g~v~nI~f~Ni~~~~v 361 (472)
+. .|.... ..+..+.|.|..|.++
T Consensus 241 LGRpW~~~s~~~~~~~a~p~~~~r~vf~~t~~~~~ 275 (342)
T 2nsp_A 241 LGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNH 275 (342)
T ss_dssp EECCCCCEEEETTEEEECTTBCCEEEEESCEECTT
T ss_pred EEeccccccccccccccCCccceeEEEEccccCcc
Confidence 43 232111 1123678888888765
No 66
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.63 E-value=0.00032 Score=71.59 Aligned_cols=108 Identities=9% Similarity=0.073 Sum_probs=81.8
Q ss_pred EEEEeeeeEEEeceEEecCCCCeeeeeccccEEEEeEEEeCCCCCCCCCceeeecce-eEEEEceEEecCC---------
Q 012057 211 IRFFMSSNLVVSGLTIQNSPQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTK-SVGIYNSMISNGD--------- 280 (472)
Q Consensus 211 i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~-nV~I~n~~i~~gD--------- 280 (472)
+.+ ..+.++|++|+|.+....+|.+.. .+.+|++|+|+... ..||.+.... +.+|.||.+....
T Consensus 110 i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n~----~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~ 183 (400)
T 1ru4_A 110 FYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHNR----NTGLEINNGGSYNTVINSDAYRNYDPKKNGSMA 183 (400)
T ss_dssp EEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESCS----SCSEEECTTCCSCEEESCEEECCCCTTTTTSSC
T ss_pred EEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECCC----ceeEEEEcccCCeEEEceEEEcccCccccCccc
Confidence 444 678999999999988777888887 77899999999742 2499998644 8899999998632
Q ss_pred ceEEeCCC-ceeEEEEeeeecC--CCcceecccCccCCCCcEEEEEEEeEEEecC
Q 012057 281 DCISIGTG-CSDVDIADVTCGP--SHGISIGSLGAHYSQACVSNITVRNAIIRES 332 (472)
Q Consensus 281 D~I~i~s~-s~nI~I~n~~~~~--~~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~ 332 (472)
|++.++.. .++.+|++|+++. ..||.+-. ....++|+||...+.
T Consensus 184 dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~--------~~~~v~i~nn~a~~N 230 (400)
T 1ru4_A 184 DGFGPKQKQGPGNRFVGCRAWENSDDGFDLFD--------SPQKVVIENSWAFRN 230 (400)
T ss_dssp CSEEECTTCCSCCEEESCEEESCSSCSEECTT--------CCSCCEEESCEEEST
T ss_pred ceEEEEecccCCeEEECCEEeecCCCcEEEEe--------cCCCEEEEeEEEECC
Confidence 67887652 3677899999886 35777731 123578999988754
No 67
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=97.59 E-value=0.0032 Score=63.19 Aligned_cols=91 Identities=16% Similarity=0.059 Sum_probs=53.8
Q ss_pred ceeee-cceeEEEEceEEecCCceEEeCCCceeEEEEeeeecCCCcceecccCccCCCCcEEEEEEEeEEEecCC-----
Q 012057 260 GIHIE-NTKSVGIYNSMISNGDDCISIGTGCSDVDIADVTCGPSHGISIGSLGAHYSQACVSNITVRNAIIRESD----- 333 (472)
Q Consensus 260 GI~i~-~s~nV~I~n~~i~~gDD~I~i~s~s~nI~I~n~~~~~~~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~----- 333 (472)
++.+. .+.++.++||.|...-|.+-... .....++||++.+.-.+-+|. -...|+||++.-..
T Consensus 158 Al~v~~~~D~~~f~~C~f~G~QDTLy~~~-~gr~yf~~c~I~GtvDFIFG~----------a~a~f~~c~i~~~~~~~~~ 226 (364)
T 3uw0_A 158 ALLLAENSDKARFKAVKLEGYQDTLYSKT-GSRSYFSDCEISGHVDFIFGS----------GITVFDNCNIVARDRSDIE 226 (364)
T ss_dssp SEEECTTCEEEEEEEEEEECSBSCEEECT-TCEEEEESCEEEESEEEEEES----------SEEEEESCEEEECCCSSCS
T ss_pred EEEEecCCCeEEEEeeEEEecccceEeCC-CCCEEEEcCEEEcCCCEECCc----------ceEEEEeeEEEEeccCccc
Confidence 34444 46777888888877767776652 356778888887766666664 14567777775321
Q ss_pred -ceEEEEeecCCCceeeeEEEEeEEEEcc
Q 012057 334 -NGLRIKTWQGGTGCVSDLSFENIQMENV 361 (472)
Q Consensus 334 -~gi~I~~~~g~~g~v~nI~f~Ni~~~~v 361 (472)
.+-.|.........-..+.|.|+++...
T Consensus 227 ~~~g~ITA~~~~~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 227 PPYGYITAPSTLTTSPYGLIFINSRLTKE 255 (364)
T ss_dssp SCCEEEEEECCCTTCSCCEEEESCEEEEC
T ss_pred CCccEEEeCCcCCCCCcEEEEEeeEEecC
Confidence 1223333211112224577888888753
No 68
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=97.52 E-value=0.00019 Score=72.52 Aligned_cols=75 Identities=13% Similarity=0.186 Sum_probs=56.5
Q ss_pred EEEEEeeeeEEEe-ceEEecCCCCeeeeeccccEEEEeEEEeCCCCCCCCCceeee------------cceeEEEEceEE
Q 012057 210 LIRFFMSSNLVVS-GLTIQNSPQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIE------------NTKSVGIYNSMI 276 (472)
Q Consensus 210 ~i~~~~~~nv~I~-~v~i~ns~~~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~------------~s~nV~I~n~~i 276 (472)
.+++..|++++++ +|.+.+ .|+||.|.+|+|+..+ |.|.+. .|++|+
T Consensus 197 TIhPi~Cqnvt~r~gL~f~e---------SCrNV~IsnC~FsVGD-----dciaiksGk~~~~~~~~~~se~~~------ 256 (514)
T 2vbk_A 197 HSKFIACQAGTCRVGLHFLG---------QCVSVSVSSCHFSRGN-----YSADESFGIRIQPQTYAWSSEAVR------ 256 (514)
T ss_dssp EEEEESCEEEEEEEEEEEES---------CCEEEEEESCEEECTT-----SCCTTCEEEEEECBCCTTTSSCBC------
T ss_pred EEeEeccCceecccCccccC---------CCCeEEEeccEEecCc-----ceeeeecCceecccccCCcchhcc------
Confidence 4889999999988 777754 6999999999999854 556654 355555
Q ss_pred ecCCceEEeCCC-----cee-EEEEeeeecCCCccee
Q 012057 277 SNGDDCISIGTG-----CSD-VDIADVTCGPSHGISI 307 (472)
Q Consensus 277 ~~gDD~I~i~s~-----s~n-I~I~n~~~~~~~gi~i 307 (472)
+.+|.++++ .+| |.|++|.+...+-+.+
T Consensus 257 ---hgav~igSE~m~~Gvk~~v~v~~Clf~~td~~~~ 290 (514)
T 2vbk_A 257 ---SEAIILDSETMCIGFKNAVYVHDCLDLHMEQLDL 290 (514)
T ss_dssp ---CEEEEEESSEEEESCSEEEEESCCEEEEEESEEE
T ss_pred ---cccEEECchhhcccccccEEEEeeeccCCccccc
Confidence 677888875 478 9999999876544433
No 69
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=97.20 E-value=0.0031 Score=63.10 Aligned_cols=133 Identities=18% Similarity=0.223 Sum_probs=82.0
Q ss_pred EEEEeeeeEEEece----EEecCCCCeeeeeccccEEEEeEEEeCCCC-CC---CCCceeeecceeEEEEceEEecCCce
Q 012057 211 IRFFMSSNLVVSGL----TIQNSPQFHMKFDGCEGVMIDKLSISSPKL-SP---NTDGIHIENTKSVGIYNSMISNGDDC 282 (472)
Q Consensus 211 i~~~~~~nv~I~~v----~i~ns~~~~i~~~~~~nv~I~~~~i~~~~~-~~---n~DGI~i~~s~nV~I~n~~i~~gDD~ 282 (472)
+.+.-.+|.+|.|. +|.. ..+.+..++||.|+|++|+.... .+ .+|| .....|+
T Consensus 74 ~~l~v~sn~TI~G~G~~~~i~g---~gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g---------------~~~~~Da 135 (355)
T 1pcl_A 74 SQISIPSNTTIIGVGSNGKFTN---GSLVIKGVKNVILRNLYIETPVDVAPHYESGDG---------------WNAEWDA 135 (355)
T ss_pred eeEEeCCCeEEEEecCCeEEec---CEEEEecCCeEEEeeeEEEcCcccccccccccC---------------ccccCce
Confidence 33444678888764 3442 35777789999999999986421 00 1233 1245689
Q ss_pred EEeCCCceeEEEEeeeecCCC------cceecccCccCC-----CCcEEEEEEEeEEEecCCceEEEEeecCCC---cee
Q 012057 283 ISIGTGCSDVDIADVTCGPSH------GISIGSLGAHYS-----QACVSNITVRNAIIRESDNGLRIKTWQGGT---GCV 348 (472)
Q Consensus 283 I~i~s~s~nI~I~n~~~~~~~------gi~iGs~~~~~~-----~~~i~nI~i~n~~i~~~~~gi~I~~~~g~~---g~v 348 (472)
|.+.. ++||.|.+|.+..+. ...+|-.....+ .....+|||++|.|.+...++.+...+... ...
T Consensus 136 I~i~~-s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~ 214 (355)
T 1pcl_A 136 AVIDN-STNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGK 214 (355)
T ss_pred EEecC-CCcEEEEeeEEeccccCccccccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCc
Confidence 99965 899999999998641 112221100000 124579999999999887777776543211 112
Q ss_pred eeEEEEeEEEEccC
Q 012057 349 SDLSFENIQMENVR 362 (472)
Q Consensus 349 ~nI~f~Ni~~~~v~ 362 (472)
.+|||-+..+.++.
T Consensus 215 ~~vT~hhN~f~~~~ 228 (355)
T 1pcl_A 215 LRVTFHNNVFDRVT 228 (355)
T ss_pred ceEEEECcEEeCCc
Confidence 46888888887653
No 70
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.00 E-value=0.0021 Score=63.58 Aligned_cols=75 Identities=11% Similarity=0.114 Sum_probs=51.5
Q ss_pred CCceEEeCCCceeEEEEeeeecCC----------Cc-ceecccCccCCCCcEEEEEEEeEEEecCCceEEEEeecCCCce
Q 012057 279 GDDCISIGTGCSDVDIADVTCGPS----------HG-ISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKTWQGGTGC 347 (472)
Q Consensus 279 gDD~I~i~s~s~nI~I~n~~~~~~----------~g-i~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~~g~~g~ 347 (472)
+.|+|.+...++||.|.+|.+..+ +| +.+. ....+|||+||.|.+-..++.+...+.....
T Consensus 119 ~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~--------~~s~~VTISnn~f~~h~k~~LiG~sd~~~~~ 190 (326)
T 3vmv_A 119 EGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMK--------RNAEYITVSWNKFENHWKTMLVGHTDNASLA 190 (326)
T ss_dssp TSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEEC--------TTCEEEEEESCEEEEEEECEEECSSSCGGGC
T ss_pred CCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEec--------CCCceEEEEceEEecCceEEEECCCCCCccc
Confidence 578999986689999999999742 22 3331 2358999999999987667777653321100
Q ss_pred eeeEEEEeEEEEcc
Q 012057 348 VSDLSFENIQMENV 361 (472)
Q Consensus 348 v~nI~f~Ni~~~~v 361 (472)
-.+|||-+..+.+.
T Consensus 191 ~~~vT~~~N~f~~~ 204 (326)
T 3vmv_A 191 PDKITYHHNYFNNL 204 (326)
T ss_dssp CEEEEEESCEEEEE
T ss_pred CccEEEEeeEecCC
Confidence 14678887777664
No 71
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=96.84 E-value=0.063 Score=48.17 Aligned_cols=131 Identities=18% Similarity=0.349 Sum_probs=82.6
Q ss_pred ccEEEEeEEEeCCCCCCCCCceeeecceeEEEEceEEec-CCceEEeCCCceeEEEEeeeecCCCc--ceecccCccCCC
Q 012057 240 EGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYNSMISN-GDDCISIGTGCSDVDIADVTCGPSHG--ISIGSLGAHYSQ 316 (472)
Q Consensus 240 ~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~-gDD~I~i~s~s~nI~I~n~~~~~~~g--i~iGs~~~~~~~ 316 (472)
+..+++|+.|-.+ ..||||..+ +.+|+|.++.. +.|+++++. +..++|.+.-...... |..-
T Consensus 52 ~GaTLkNvIIG~~----~~dGIHC~G--~ctl~NVwwedVcEDA~T~kg-~g~~~I~GGgA~~A~DKV~Q~N-------- 116 (196)
T 3t9g_A 52 KGANLKNVIIGAP----GCDGIHCYG--DNVVENVVWEDVGEDALTVKS-EGVVEVIGGSAKEAADKVFQLN-------- 116 (196)
T ss_dssp TTCEEEEEEECSC----CTTCEEECS--SEEEEEEEESSCCSCSEEECS-SEEEEEESCEEEEEEEEEEEEC--------
T ss_pred CCCEEEEEEECCC----CcCcEEEcC--CEeEEEEEeeeeeceeeEEcC-CCeEEEECCCccCCCceEEEEC--------
Confidence 3567888888653 358999975 57899999876 889999986 5567777665544322 3331
Q ss_pred CcEEEEEEEeEEEecCCceEEEEeecCCCceeeeEEEEeEEEEccCeeEEEEeeccCCccccCCCCceEEEeEEEEeEEE
Q 012057 317 ACVSNITVRNAIIRESDNGLRIKTWQGGTGCVSDLSFENIQMENVRNCINIDQYYCLSKECLNQTSAVFVTGITYRNIKG 396 (472)
Q Consensus 317 ~~i~nI~i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~v~~~i~I~~~~~~~~~~~~~~~~~~i~nI~f~nI~~ 396 (472)
+. -.+.|+|.++.+ .|-...+. |....=++|.++|+++.+++..+. +.. .....+.+.|+++.|+.-
T Consensus 117 g~-Gtv~I~nF~~~~--~GKl~RSC-Gnc~~~r~v~i~~v~~~n~k~~l~-rtd--------S~~~~~~~~n~~~~~~~~ 183 (196)
T 3t9g_A 117 AP-CTFKVKNFTATN--IGKLVRQN-GNTTFKVVIYLEDVTLNNVKSCVA-KSD--------SPVSELWYHNLNVNNCKT 183 (196)
T ss_dssp SS-EEEEEEEEEEEE--EEEEEEEC-TTCCSCEEEEEEEEEEEEEEEEEE-ECC--------CTTCEEEEEEEEEEEEEE
T ss_pred CC-ceEEEeeEEEcc--CCEEEEcC-CCCCceeEEEEeCeEEeCCEEEEE-EcC--------CCCCEEEEecceecCCCc
Confidence 11 356677777764 34444442 323344788888888887765543 221 134567777777777764
Q ss_pred Ee
Q 012057 397 TY 398 (472)
Q Consensus 397 t~ 398 (472)
.+
T Consensus 184 ~~ 185 (196)
T 3t9g_A 184 LF 185 (196)
T ss_dssp EE
T ss_pred ce
Confidence 43
No 72
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=96.40 E-value=0.25 Score=50.09 Aligned_cols=46 Identities=15% Similarity=0.140 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHhhc---CCcEEEecCCcEEEEeeeeecCCCCCceEEEeCc
Q 012057 93 DTAAFRAAWKAACAV---EAGVVLAPSDYVFKITSTIFSGPCKPGLVFQLDG 141 (472)
Q Consensus 93 dT~Aiq~Ai~~a~~~---~g~~V~iP~G~ty~i~~~~l~gp~~s~v~l~~~G 141 (472)
|-.-||+||++|... ..-+|+|.+| +|.-. +.+.. .|.+++|+++|
T Consensus 88 ~f~TIqeAVdaap~~~~~~r~vI~Ik~G-vY~E~-V~Ip~-~K~~ItL~G~G 136 (422)
T 3grh_A 88 THTTIQAAVDAAIIKRTNKRQYIAVMPG-EYQGT-VYVPA-APGGITLYGTG 136 (422)
T ss_dssp CBSSHHHHHHHHHTTCCSSCEEEEECSE-EEESC-EEECC-CSSCEEEEECS
T ss_pred CcCCHHHHHHhchhcCCCccEEEEEeCC-eEeee-EEecC-CCCcEEEEecc
Confidence 456799999976432 1358999999 89743 44411 16788888876
No 73
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=95.78 E-value=0.44 Score=42.72 Aligned_cols=133 Identities=11% Similarity=0.148 Sum_probs=95.1
Q ss_pred eeeEEEeceEEecCCCCeeeeeccccEEEEeEEEeCCCCCCCCCceeeecceeEEEEceEEecCCceEEeCCCceeEEEE
Q 012057 216 SSNLVVSGLTIQNSPQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYNSMISNGDDCISIGTGCSDVDIA 295 (472)
Q Consensus 216 ~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~gDD~I~i~s~s~nI~I~ 295 (472)
-...+|+++.|-....-+||..+ +-+|+|+-+..- ..|.+.+.++..++|.+.-.++.+|-|--..+...+.|+
T Consensus 51 e~GaTLkNvIIG~~~~dGIHC~G--~ctl~NVwwedV----cEDA~T~kg~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~ 124 (196)
T 3t9g_A 51 EKGANLKNVIIGAPGCDGIHCYG--DNVVENVVWEDV----GEDALTVKSEGVVEVIGGSAKEAADKVFQLNAPCTFKVK 124 (196)
T ss_dssp CTTCEEEEEEECSCCTTCEEECS--SEEEEEEEESSC----CSCSEEECSSEEEEEESCEEEEEEEEEEEECSSEEEEEE
T ss_pred cCCCEEEEEEECCCCcCcEEEcC--CEeEEEEEeeee----eceeeEEcCCCeEEEECCCccCCCceEEEECCCceEEEe
Confidence 45788899988766666788764 678999988764 458999998889999999999988877666667788899
Q ss_pred eeeecCCCcceecccCccCCCCcEEEEEEEeEEEecCCceEEEEeecCCCceeeeEEEEeEEEEccCe
Q 012057 296 DVTCGPSHGISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKTWQGGTGCVSDLSFENIQMENVRN 363 (472)
Q Consensus 296 n~~~~~~~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~v~~ 363 (472)
|.+..+ .|-.+-|.|. ...-++|.++|+++.+....| +++.. .-..+++.|+++.++..
T Consensus 125 nF~~~~-~GKl~RSCGn---c~~~r~v~i~~v~~~n~k~~l-~rtdS----~~~~~~~~n~~~~~~~~ 183 (196)
T 3t9g_A 125 NFTATN-IGKLVRQNGN---TTFKVVIYLEDVTLNNVKSCV-AKSDS----PVSELWYHNLNVNNCKT 183 (196)
T ss_dssp EEEEEE-EEEEEEECTT---CCSCEEEEEEEEEEEEEEEEE-EECCC----TTCEEEEEEEEEEEEEE
T ss_pred eEEEcc-CCEEEEcCCC---CCceeEEEEeCeEEeCCEEEE-EEcCC----CCCEEEEecceecCCCc
Confidence 877653 3333333331 123479999999999874443 33321 23578888888888765
No 74
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=95.51 E-value=0.063 Score=56.15 Aligned_cols=146 Identities=8% Similarity=-0.037 Sum_probs=98.0
Q ss_pred EEEEE----eeeeEEEeceEEecC-CCCeeeeeccccEEEEeEEEeCCCCCCCCCceeeecceeEEEEceEEecCC----
Q 012057 210 LIRFF----MSSNLVVSGLTIQNS-PQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYNSMISNGD---- 280 (472)
Q Consensus 210 ~i~~~----~~~nv~I~~v~i~ns-~~~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~gD---- 280 (472)
.+++. .+.+.+|++-.+.+. ....+....+.+.+|++.+|... ..||.+..+.+.+|+++.|....
T Consensus 217 ~iR~G~h~m~s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~~-----~ggi~l~~~~~s~I~~N~f~gN~~~~~ 291 (506)
T 1dbg_A 217 GIRIGYYRNDIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNC-----QGTMNFRHGDHQVAINNFYIGNDQRFG 291 (506)
T ss_dssp SEEECSSTTCBCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEESC-----SSEEEEEECSSCEEESCEEEECSSSSC
T ss_pred cEEEEEEecccCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEcc-----cCcEEEeecCccEEECCEEECCcCccC
Confidence 45554 356778887666654 34556666777789999999863 35799988888899999987643
Q ss_pred -ceEEeCCCceeEEEEeeeecCCC--------cceecccCccCCCCcEEEEEEEeEEEecCCc-eEEEEee---------
Q 012057 281 -DCISIGTGCSDVDIADVTCGPSH--------GISIGSLGAHYSQACVSNITVRNAIIRESDN-GLRIKTW--------- 341 (472)
Q Consensus 281 -D~I~i~s~s~nI~I~n~~~~~~~--------gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~-gi~I~~~--------- 341 (472)
.||.+.. . +.+|+|++|.+.. ||.+..-........+++++|++++|.++.. ||.+..+
T Consensus 292 ~~Gi~i~~-~-~~~I~nN~f~~~~g~~~~~~~GI~i~~G~~~~~~~~~~~~~I~~Ntfi~n~~~gI~~~~~~~~~~~~~~ 369 (506)
T 1dbg_A 292 YGGMFVWG-S-RHVIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIANNAFINVNGYAIHFNPLDERRKEYCA 369 (506)
T ss_dssp BCCEEECS-B-SCEEESCEEEESSBCGGGTSEEEEECCBCTTSTTCCCBSEEEESCEEESCSSEEEESSTTHHHHHHHHH
T ss_pred ceEEEEEC-C-CCEEECCEEECCcCccccccccEEEecCCCccccccccCcEEECCEEECCccccEEEcccccccccccc
Confidence 6788865 3 4499999987743 4455210000012346899999999999987 9999711
Q ss_pred -c-CCCceeeeEEEEeEEEEccC
Q 012057 342 -Q-GGTGCVSDLSFENIQMENVR 362 (472)
Q Consensus 342 -~-g~~g~v~nI~f~Ni~~~~v~ 362 (472)
. .....=.|++|.|..+.+-.
T Consensus 370 g~~~~~~~p~~~~~~nN~i~~~~ 392 (506)
T 1dbg_A 370 ANRLKFETPHQLMLKGNLFFKDK 392 (506)
T ss_dssp HTTCCCBCCCSEEEESCEEECCS
T ss_pred cccccccCCCcEEEEccEEEcCC
Confidence 1 11123467888887776544
No 75
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=95.42 E-value=0.11 Score=51.06 Aligned_cols=112 Identities=5% Similarity=0.089 Sum_probs=77.8
Q ss_pred ccccEEEEeEEEeCCCCC--CCCCceeeecceeEEEEceEEecCCceEEeCCCceeEEEEeeeecCCCcceecccCccCC
Q 012057 238 GCEGVMIDKLSISSPKLS--PNTDGIHIENTKSVGIYNSMISNGDDCISIGTGCSDVDIADVTCGPSHGISIGSLGAHYS 315 (472)
Q Consensus 238 ~~~nv~I~~~~i~~~~~~--~n~DGI~i~~s~nV~I~n~~i~~gDD~I~i~s~s~nI~I~n~~~~~~~gi~iGs~~~~~~ 315 (472)
..++++++|++|.+.... .-.-+|.+ .+.++.++||.|...-|.+-... .+ ..++||++.+...+-+|.
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~-~r-~~~~~c~I~G~vDFIfG~------ 162 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAYQDSLYVHS-NR-QFFINCFIAGTVDFIFGN------ 162 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECSTTCEEECS-SE-EEEESCEEEESSSCEEES------
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECccceeeeecC-cc-EEEEecEEEeeeeEEecC------
Confidence 368999999999986421 12345666 57889999999999888888876 44 499999999877777764
Q ss_pred CCcEEEEEEEeEEEecCC----ceEEEEeec-CCCceeeeEEEEeEEEEccC
Q 012057 316 QACVSNITVRNAIIRESD----NGLRIKTWQ-GGTGCVSDLSFENIQMENVR 362 (472)
Q Consensus 316 ~~~i~nI~i~n~~i~~~~----~gi~I~~~~-g~~g~v~nI~f~Ni~~~~v~ 362 (472)
....|+||++.... ..-.|.... .....-..+.|.|+++....
T Consensus 163 ----~~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~ 210 (319)
T 1gq8_A 163 ----AAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATS 210 (319)
T ss_dssp ----CEEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECT
T ss_pred ----CcEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCC
Confidence 14779999997532 112333321 11234567889999998643
No 76
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=95.21 E-value=0.1 Score=51.26 Aligned_cols=112 Identities=7% Similarity=0.056 Sum_probs=77.8
Q ss_pred ccccEEEEeEEEeCCCCC--CCCCceeeecceeEEEEceEEecCCceEEeCCCceeEEEEeeeecCCCcceecccCccCC
Q 012057 238 GCEGVMIDKLSISSPKLS--PNTDGIHIENTKSVGIYNSMISNGDDCISIGTGCSDVDIADVTCGPSHGISIGSLGAHYS 315 (472)
Q Consensus 238 ~~~nv~I~~~~i~~~~~~--~n~DGI~i~~s~nV~I~n~~i~~gDD~I~i~s~s~nI~I~n~~~~~~~gi~iGs~~~~~~ 315 (472)
..++++++|++|.+.... .-.-+|.+ .+.++.++||.|...-|.+-... .++ .++||++.+.-.+-+|.
T Consensus 88 ~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~-~r~-~~~~c~I~G~vDFIfG~------ 158 (317)
T 1xg2_A 88 VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDAYQDTLYAHS-QRQ-FYRDSYVTGTVDFIFGN------ 158 (317)
T ss_dssp CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEECSTTCEEECS-SEE-EEESCEEEESSSCEEEC------
T ss_pred ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCccccceeecC-ccE-EEEeeEEEeceeEEcCC------
Confidence 478999999999986421 12345666 57889999999999888888876 344 89999999877777764
Q ss_pred CCcEEEEEEEeEEEecCC----ceEEEEeec-CCCceeeeEEEEeEEEEccC
Q 012057 316 QACVSNITVRNAIIRESD----NGLRIKTWQ-GGTGCVSDLSFENIQMENVR 362 (472)
Q Consensus 316 ~~~i~nI~i~n~~i~~~~----~gi~I~~~~-g~~g~v~nI~f~Ni~~~~v~ 362 (472)
....|+||++.... ..-.|.... .....-..+.|.|+++....
T Consensus 159 ----~~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~ 206 (317)
T 1xg2_A 159 ----AAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASS 206 (317)
T ss_dssp ----CEEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEECT
T ss_pred ----ceEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecCC
Confidence 14779999997532 112233221 11234567889999997643
No 77
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=94.96 E-value=0.37 Score=43.37 Aligned_cols=109 Identities=22% Similarity=0.387 Sum_probs=63.8
Q ss_pred ccEEEEeEEEeCCCCCCCCCceeeecceeEEEEceEEec-CCceEEeCCCceeEEEEeeeecCCCc--ceecccCccCCC
Q 012057 240 EGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYNSMISN-GDDCISIGTGCSDVDIADVTCGPSHG--ISIGSLGAHYSQ 316 (472)
Q Consensus 240 ~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~-gDD~I~i~s~s~nI~I~n~~~~~~~g--i~iGs~~~~~~~ 316 (472)
+..+++|+.|-.+ ..||||..+ ..+|+|.++.. +.|+++++. +..++|.+.-...... |..-.
T Consensus 48 ~GaTLkNvIIG~~----~~dGIHC~G--~CtleNVwwedVcEDA~T~k~-~g~~~I~GGgA~~A~DKV~Q~Ng------- 113 (197)
T 1ee6_A 48 AGASLKNVVIGAP----AADGVHCYG--DCTITNVIWEDVGEDALTLKS-SGTVNISGGAAYKAYDKVFQINA------- 113 (197)
T ss_dssp TTEEEEEEEECSS----CTTCEEEES--CEEEEEEEESSCCSCSEEEEE-SEEEEEESCEEEEEEEEEEEECS-------
T ss_pred CCCEEEEEEEcCC----CcccEEEcC--ceeEEEEEeeeccccccEEcC-CCeEEEECCCccCCCccEEEecC-------
Confidence 3567777777653 458888876 47888888876 788888885 4555665544443222 23211
Q ss_pred CcEEEEEEEeEEEecCCceEEEEeecCCCceeeeEEEEeEEEEccCeeEEE
Q 012057 317 ACVSNITVRNAIIRESDNGLRIKTWQGGTGCVSDLSFENIQMENVRNCINI 367 (472)
Q Consensus 317 ~~i~nI~i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~v~~~i~I 367 (472)
. -.+.|+|.+..+ .|=...+. |....=++|.++|+++.+....|..
T Consensus 114 -~-Gtv~I~nF~~~~--~GKl~RSc-Gnc~~~r~v~i~~v~~~~~k~~i~~ 159 (197)
T 1ee6_A 114 -A-GTINIRNFRADD--IGKLVRQN-GGTTYKVVMNVENCNISRVKDAILR 159 (197)
T ss_dssp -S-EEEEEESCEEEE--EEEEEEEC-TTCCSCEEEEEESCEEEEEEEEEEE
T ss_pred -C-ceEEEeeEEEcc--CCEEEEcC-CCCccceEEEEeceEEECceEEEEE
Confidence 1 256666666543 34333332 2222336777777777776655443
No 78
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=94.17 E-value=0.38 Score=47.74 Aligned_cols=112 Identities=7% Similarity=-0.003 Sum_probs=76.5
Q ss_pred ccccEEEEeEEEeCCCC--------------CCCCCceee---ecceeEEEEceEEecCCceEEeCCCceeEEEEeeeec
Q 012057 238 GCEGVMIDKLSISSPKL--------------SPNTDGIHI---ENTKSVGIYNSMISNGDDCISIGTGCSDVDIADVTCG 300 (472)
Q Consensus 238 ~~~nv~I~~~~i~~~~~--------------~~n~DGI~i---~~s~nV~I~n~~i~~gDD~I~i~s~s~nI~I~n~~~~ 300 (472)
.+++++++|++|.+... ........+ ..+.++.++||.|...-|.+-... ....++||++.
T Consensus 94 ~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~~~--gr~~~~~c~I~ 171 (342)
T 2nsp_A 94 SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYVSG--GRSFFSDCRIS 171 (342)
T ss_dssp CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCEEECS--SEEEEESCEEE
T ss_pred ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccceEEECC--CCEEEEcCEEE
Confidence 47899999999998641 112233333 357899999999999888888875 46899999999
Q ss_pred CCCcceecccCccCCCCcEEEEEEEeEEEecCCc---e-----EEEEeecCCCceeeeEEEEeEEEEcc
Q 012057 301 PSHGISIGSLGAHYSQACVSNITVRNAIIRESDN---G-----LRIKTWQGGTGCVSDLSFENIQMENV 361 (472)
Q Consensus 301 ~~~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~---g-----i~I~~~~g~~g~v~nI~f~Ni~~~~v 361 (472)
+.-.+-+|.- ...|+||++.-... + -.|.........-..+.|.|+++...
T Consensus 172 G~vDFIFG~a----------~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~~~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 172 GTVDFIFGDG----------TALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRE 230 (342)
T ss_dssp ESEEEEEESS----------EEEEESCEEEECCCTTSCTTSCCEEEEEECCBTTCSCCEEEESCEEEES
T ss_pred eceEEEeCCc----------eEEEecCEEEEecCcccccccCceEEEccCCCCCCCCEEEEEcCEEecC
Confidence 8877777652 47799999864321 1 23433211112234578999999864
No 79
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=93.46 E-value=1.1 Score=40.29 Aligned_cols=132 Identities=13% Similarity=0.142 Sum_probs=91.8
Q ss_pred eeeEEEeceEEecCCCCeeeeeccccEEEEeEEEeCCCCCCCCCceeeecceeEEEEceEEecCCceEEeCCCceeEEEE
Q 012057 216 SSNLVVSGLTIQNSPQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYNSMISNGDDCISIGTGCSDVDIA 295 (472)
Q Consensus 216 ~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~gDD~I~i~s~s~nI~I~ 295 (472)
-+..+|+++.|-....-+||..+ +-+|+|+-+..- ..|.+.+.++..++|.+.-.++.+|-|--..+...+.|+
T Consensus 47 e~GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwedV----cEDA~T~k~~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~ 120 (197)
T 1ee6_A 47 EAGASLKNVVIGAPAADGVHCYG--DCTITNVIWEDV----GEDALTLKSSGTVNISGGAAYKAYDKVFQINAAGTINIR 120 (197)
T ss_dssp CTTEEEEEEEECSSCTTCEEEES--CEEEEEEEESSC----CSCSEEEEESEEEEEESCEEEEEEEEEEEECSSEEEEEE
T ss_pred cCCCEEEEEEEcCCCcccEEEcC--ceeEEEEEeeec----cccccEEcCCCeEEEECCCccCCCccEEEecCCceEEEe
Confidence 45789999999777677788875 578999998874 458999998889999999999988877666667789999
Q ss_pred eeeecCCCcceecccCccCCCCcEEEEEEEeEEEecCCceEEEEeecCCCceeeeEEEEeEEEEccC
Q 012057 296 DVTCGPSHGISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKTWQGGTGCVSDLSFENIQMENVR 362 (472)
Q Consensus 296 n~~~~~~~gi~iGs~~~~~~~~~i~nI~i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~v~ 362 (472)
|.+... .|=..-|.|.- ..-++|.|+|+++.+....|.... ..| ..+++.|....++.
T Consensus 121 nF~~~~-~GKl~RScGnc---~~~r~v~i~~v~~~~~k~~i~~~d---s~g--dtati~n~~~~~v~ 178 (197)
T 1ee6_A 121 NFRADD-IGKLVRQNGGT---TYKVVMNVENCNISRVKDAILRTD---SST--STGRIVNTRYSNVP 178 (197)
T ss_dssp SCEEEE-EEEEEEECTTC---CSCEEEEEESCEEEEEEEEEEECC---CTT--CEEEEESCEEESCS
T ss_pred eEEEcc-CCEEEEcCCCC---ccceEEEEeceEEECceEEEEEec---CCC--CEEEEEecccCCcc
Confidence 976542 23222222211 122799999999998744443322 222 35667777766655
No 80
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=92.75 E-value=0.034 Score=55.68 Aligned_cols=40 Identities=35% Similarity=0.456 Sum_probs=30.9
Q ss_pred ecccCCCCcchHHHHHHHHHHHhhcCCcEEEecCCcEEEEeee
Q 012057 83 YGAVGDGSADDTAAFRAAWKAACAVEAGVVLAPSDYVFKITST 125 (472)
Q Consensus 83 fGA~gDG~tDdT~Aiq~Ai~~a~~~~g~~V~iP~G~ty~i~~~ 125 (472)
=||+|||+||||+|+..|++++ .++.++=-.|.||.++.+
T Consensus 4 ~~a~gdgvtddt~a~~~~l~~~---~~~~~IDG~G~T~kVs~l 43 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALNDT---PVGQKINGNGKTYKVTSL 43 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHHHS---CTTSCEECTTCEEECSSC
T ss_pred CcccCCCccCcHHHHHHHhccC---CCCeEEeCCCceEEeeeC
Confidence 4899999999999999999853 344455556778877765
No 81
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=92.06 E-value=3.3 Score=40.35 Aligned_cols=127 Identities=14% Similarity=0.209 Sum_probs=68.4
Q ss_pred cEEEEeEEEeCCCCCCCCCceeee-cceeEEEEceEEec-CCceEEeCCCceeEEEEeeeecCC-------Cc--ceecc
Q 012057 241 GVMIDKLSISSPKLSPNTDGIHIE-NTKSVGIYNSMISN-GDDCISIGTGCSDVDIADVTCGPS-------HG--ISIGS 309 (472)
Q Consensus 241 nv~I~~~~i~~~~~~~n~DGI~i~-~s~nV~I~n~~i~~-gDD~I~i~s~s~nI~I~n~~~~~~-------~g--i~iGs 309 (472)
..+++|+.|-.+ ..||||.. + +.+|+|.++.. +.|+++++. ..+.|.+.-.... .. |..-.
T Consensus 159 GatlkNvIiG~~----~~dGIHC~~G--~CtleNVwwedVcEDA~T~kg--~~~~I~GGgA~~a~~g~~g~~DKV~Q~Ng 230 (344)
T 3b4n_A 159 ATVKNLRISASG----GADGIHCDSG--NCTIENVIWEDICEDAATNNG--KTMTIVGGIAHNAKDGYGGKPDKVLQHNS 230 (344)
T ss_dssp CEEEEEEECTTC----CTTCEEEEES--EEEEEEEEESSCSSCSEEECS--SEEEEESCEEEECTTCTTSSCCEEEEECC
T ss_pred CcEEEEEEecCC----CccceEEccC--CeeEEEEeehhcccccceecC--ceEEEECchhccccccccCCCCcEEEeCC
Confidence 355666666442 45888887 4 47888888876 788888884 3555555433322 11 22211
Q ss_pred cCccCCCCcEEEEEEEe--EEEecCCceEEEEeec--CCCceeeeEEEEeEEEEccC-eeEEEEeeccCCccccCCCCce
Q 012057 310 LGAHYSQACVSNITVRN--AIIRESDNGLRIKTWQ--GGTGCVSDLSFENIQMENVR-NCINIDQYYCLSKECLNQTSAV 384 (472)
Q Consensus 310 ~~~~~~~~~i~nI~i~n--~~i~~~~~gi~I~~~~--g~~g~v~nI~f~Ni~~~~v~-~~i~I~~~~~~~~~~~~~~~~~ 384 (472)
. -.++|.| -++.. +.|=...+.. ...+.=++|+++|+.+.+.. .-+.|...|. ...
T Consensus 231 -------~--gtv~I~~~~F~~~~-~~GKl~RSCGnC~~~~~~R~v~i~nv~~~g~~~~lvGiN~NyG---------Dta 291 (344)
T 3b4n_A 231 -------K--NSTTVVKGNFTLTG-EHGKLWRSCGDCSNNGGPRFLTVTSATVNGTIDSIAGVNRNYG---------DVA 291 (344)
T ss_dssp -------S--SEEEEEETTEEEEE-EEEEEEEECSSCTTCCCCEEEEESSEEEEEEEEEEEEEEGGGT---------CEE
T ss_pred -------C--ccEEEecCceEEEc-cCCeEeEccCCcccCCcceEEEEeceEEeCCceEEEEEeCCCC---------CEE
Confidence 1 1455553 22211 2343333321 11224577888888775543 2344665544 456
Q ss_pred EEEeEEEEeE
Q 012057 385 FVTGITYRNI 394 (472)
Q Consensus 385 ~i~nI~f~nI 394 (472)
.|+|+++++-
T Consensus 292 ti~n~~i~~~ 301 (344)
T 3b4n_A 292 TISGLKIKNY 301 (344)
T ss_dssp EECSEEETTC
T ss_pred EEEEEEEecC
Confidence 7888888763
No 82
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=90.00 E-value=2.2 Score=43.22 Aligned_cols=17 Identities=29% Similarity=0.479 Sum_probs=11.1
Q ss_pred EEeeeeEEEeceEEecC
Q 012057 213 FFMSSNLVVSGLTIQNS 229 (472)
Q Consensus 213 ~~~~~nv~I~~v~i~ns 229 (472)
+...+++.+++|+|.|.
T Consensus 197 ~V~g~~F~a~niTf~Nt 213 (422)
T 3grh_A 197 WSQNNGLQLQNLTIENT 213 (422)
T ss_dssp EECCTTCEEEEEEEEET
T ss_pred EEECCCEEEEeeEEEeC
Confidence 34456777777777765
No 83
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=88.11 E-value=6.6 Score=38.23 Aligned_cols=166 Identities=16% Similarity=0.183 Sum_probs=92.5
Q ss_pred CcEEEeeeeeecCCCcccCCCCCCCCCCCCCCCCCCCCCCeEEEEEeeeeEEEeceEEecCCCCeeeee-ccccEEEEeE
Q 012057 169 DMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNLVVSGLTIQNSPQFHMKFD-GCEGVMIDKL 247 (472)
Q Consensus 169 nvtI~G~GtIdG~g~~~w~~~~~~~~g~~g~~~~g~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~-~~~nv~I~~~ 247 (472)
.-+|.| +++||.+..| ...+..+. + ...| ++.+. +..+++++.|-....-+||.. + +-+|+|+
T Consensus 124 ~~~i~g-~t~Dgg~k~~-~~~c~~q~---E------~q~~-vF~le--~GatlkNvIiG~~~~dGIHC~~G--~CtleNV 187 (344)
T 3b4n_A 124 GATFEN-RTVDCGGVTI-GTSCPNDS---D------KQKP-LIILK--NATVKNLRISASGGADGIHCDSG--NCTIENV 187 (344)
T ss_dssp TEEEES-SEEECTTCEE-CCCCCTTC---S------CCCC-SEEEE--SCEEEEEEECTTCCTTCEEEEES--EEEEEEE
T ss_pred ceeEec-ceEcCCCcEE-CCCCCCcc---c------cCcc-EEEEc--cCcEEEEEEecCCCccceEEccC--CeeEEEE
Confidence 346666 6888877764 33332111 1 1223 34443 357788888866555667776 4 4678888
Q ss_pred EEeCCCCCCCCCceeeecceeEEEEceEEecC-------CceEEeCCCceeEEEEe-e-eecCCCcceecccCccCCCCc
Q 012057 248 SISSPKLSPNTDGIHIENTKSVGIYNSMISNG-------DDCISIGTGCSDVDIAD-V-TCGPSHGISIGSLGAHYSQAC 318 (472)
Q Consensus 248 ~i~~~~~~~n~DGI~i~~s~nV~I~n~~i~~g-------DD~I~i~s~s~nI~I~n-~-~~~~~~gi~iGs~~~~~~~~~ 318 (472)
.++.- ..|.+.+.+ ..++|.+.-.++. +|-|-=..+...+.|.| . .+....|=..-|.|.-...+.
T Consensus 188 wwedV----cEDA~T~kg-~~~~I~GGgA~~a~~g~~g~~DKV~Q~Ng~gtv~I~~~~F~~~~~~GKl~RSCGnC~~~~~ 262 (344)
T 3b4n_A 188 IWEDI----CEDAATNNG-KTMTIVGGIAHNAKDGYGGKPDKVLQHNSKNSTTVVKGNFTLTGEHGKLWRSCGDCSNNGG 262 (344)
T ss_dssp EESSC----SSCSEEECS-SEEEEESCEEEECTTCTTSSCCEEEEECCSSEEEEEETTEEEEEEEEEEEEECSSCTTCCC
T ss_pred eehhc----ccccceecC-ceEEEECchhccccccccCCCCcEEEeCCCccEEEecCceEEEccCCeEeEccCCcccCCc
Confidence 88763 348888884 4788888887776 66664444455677765 2 221222322222222222224
Q ss_pred EEEEEEEeEEEecCCce-EEEEeecCCCceeeeEEEEeEEEEc
Q 012057 319 VSNITVRNAIIRESDNG-LRIKTWQGGTGCVSDLSFENIQMEN 360 (472)
Q Consensus 319 i~nI~i~n~~i~~~~~g-i~I~~~~g~~g~v~nI~f~Ni~~~~ 360 (472)
-++|+|+|+++.+...- +.|....|.. .+++|+++++
T Consensus 263 ~R~v~i~nv~~~g~~~~lvGiN~NyGDt-----ati~n~~i~~ 300 (344)
T 3b4n_A 263 PRFLTVTSATVNGTIDSIAGVNRNYGDV-----ATISGLKIKN 300 (344)
T ss_dssp CEEEEESSEEEEEEEEEEEEEEGGGTCE-----EEECSEEETT
T ss_pred ceEEEEeceEEeCCceEEEEEeCCCCCE-----EEEEEEEEec
Confidence 58899999987544211 2333333433 3456666654
No 84
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=87.28 E-value=2.4 Score=42.29 Aligned_cols=136 Identities=15% Similarity=0.194 Sum_probs=89.7
Q ss_pred EeeeeEEEeceEEecCCC------------------C--eeeee-ccccEEEEeEEEeCCCCCCCCCceeeecceeEEEE
Q 012057 214 FMSSNLVVSGLTIQNSPQ------------------F--HMKFD-GCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIY 272 (472)
Q Consensus 214 ~~~~nv~I~~v~i~ns~~------------------~--~i~~~-~~~nv~I~~~~i~~~~~~~n~DGI~i~~s~nV~I~ 272 (472)
...++++++||+|+|+.. . .+.+. ..+.+.+.+|+|... .|.+......+..++
T Consensus 119 V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~-----QDTLy~~~~gr~yf~ 193 (364)
T 3uw0_A 119 VNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGY-----QDTLYSKTGSRSYFS 193 (364)
T ss_dssp ECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECS-----BSCEEECTTCEEEEE
T ss_pred EECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEec-----ccceEeCCCCCEEEE
Confidence 467899999999998842 1 24444 588999999999983 488988766789999
Q ss_pred ceEEecCCceEEeCCCceeEEEEeeeecCC--------Cc-ceecccCccCCCCcEEEEEEEeEEEecCCc----eEEEE
Q 012057 273 NSMISNGDDCISIGTGCSDVDIADVTCGPS--------HG-ISIGSLGAHYSQACVSNITVRNAIIRESDN----GLRIK 339 (472)
Q Consensus 273 n~~i~~gDD~I~i~s~s~nI~I~n~~~~~~--------~g-i~iGs~~~~~~~~~i~nI~i~n~~i~~~~~----gi~I~ 339 (472)
+|+|...-|-| ++. ....++||++..- .| |.--+.. ...-.-+.|.||++..... ...+.
T Consensus 194 ~c~I~GtvDFI-FG~--a~a~f~~c~i~~~~~~~~~~~~g~ITA~~~~----~~~~~G~vf~~c~i~~~~~~~~~~~yLG 266 (364)
T 3uw0_A 194 DCEISGHVDFI-FGS--GITVFDNCNIVARDRSDIEPPYGYITAPSTL----TTSPYGLIFINSRLTKEPGVPANSFALG 266 (364)
T ss_dssp SCEEEESEEEE-EES--SEEEEESCEEEECCCSSCSSCCEEEEEECCC----TTCSCCEEEESCEEEECTTCCSSCEEEE
T ss_pred cCEEEcCCCEE-CCc--ceEEEEeeEEEEeccCcccCCccEEEeCCcC----CCCCcEEEEEeeEEecCCCCccccEEec
Confidence 99999766654 333 4688999998641 12 3222211 1111347899999986521 23332
Q ss_pred -eecCC----Cc------eeeeEEEEeEEEEcc
Q 012057 340 -TWQGG----TG------CVSDLSFENIQMENV 361 (472)
Q Consensus 340 -~~~g~----~g------~v~nI~f~Ni~~~~v 361 (472)
.|... .| .+..+.|.|..|.++
T Consensus 267 RPW~~~s~~~~g~yadp~a~~rvVf~~s~m~~~ 299 (364)
T 3uw0_A 267 RPWHPTTTFADGRYADPAAIGQSVFINTTMDDH 299 (364)
T ss_dssp CCCCCEEECSSCEEECTTCCCEEEEESCEECTT
T ss_pred cccccccccccccccccCccceEEEEeCCCCce
Confidence 23221 01 134789999999875
No 85
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=68.23 E-value=27 Score=34.16 Aligned_cols=81 Identities=22% Similarity=0.275 Sum_probs=52.4
Q ss_pred ceeEEEEceEEec-CCceEEeCCC-----------------------ceeEEEEeeeecCCCcceecccCccCCCCcEEE
Q 012057 266 TKSVGIYNSMISN-GDDCISIGTG-----------------------CSDVDIADVTCGPSHGISIGSLGAHYSQACVSN 321 (472)
Q Consensus 266 s~nV~I~n~~i~~-gDD~I~i~s~-----------------------s~nI~I~n~~~~~~~gi~iGs~~~~~~~~~i~n 321 (472)
+-|..++++.... -.|++.+++. -.|-.|.|..+.++-|+.+|..| .++.++|
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG---~G~YVSN 345 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDG---KGMYVSN 345 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECCSSEEEEEEE---ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC---CCceEee
Confidence 4455666655433 5677777763 25778889888888788887655 4567777
Q ss_pred EEEEeEEEecCCceEEEEeecCCCceeeeEEEEeEEEEcc
Q 012057 322 ITVRNAIIRESDNGLRIKTWQGGTGCVSDLSFENIQMENV 361 (472)
Q Consensus 322 I~i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~v 361 (472)
|+++||- ..|..+-+. +=+|.||++-+.
T Consensus 346 itv~DCA----GsG~~~~t~--------~~~FtNi~vID~ 373 (559)
T 2vfm_A 346 ITVEDCA----GSGAYLLTH--------ESVFTNIAIIDT 373 (559)
T ss_dssp EEEESCS----SEEEEEEEE--------SCEEEEEEEESC
T ss_pred eEehhcc----CcceEEeec--------cceeeeeEEEec
Confidence 7777763 246655443 235777777654
No 86
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=67.10 E-value=27 Score=34.19 Aligned_cols=81 Identities=22% Similarity=0.326 Sum_probs=52.5
Q ss_pred ceeEEEEceEEec-CCceEEeCCC-----------------------ceeEEEEeeeecCCCcceecccCccCCCCcEEE
Q 012057 266 TKSVGIYNSMISN-GDDCISIGTG-----------------------CSDVDIADVTCGPSHGISIGSLGAHYSQACVSN 321 (472)
Q Consensus 266 s~nV~I~n~~i~~-gDD~I~i~s~-----------------------s~nI~I~n~~~~~~~gi~iGs~~~~~~~~~i~n 321 (472)
+-|..++++.... -.|++.+++. -.|-.|.|..+.++-|+.+|..| .++.++|
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG---~G~YVSN 348 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSLGVGLGMDG---SGGYVSN 348 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEE---ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC---CCceEee
Confidence 4455666655433 5677777763 25778889888888788887655 4567777
Q ss_pred EEEEeEEEecCCceEEEEeecCCCceeeeEEEEeEEEEcc
Q 012057 322 ITVRNAIIRESDNGLRIKTWQGGTGCVSDLSFENIQMENV 361 (472)
Q Consensus 322 I~i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~v 361 (472)
|+++||- ..|..+-+. +=+|.||++-+.
T Consensus 349 itv~DCA----GsG~~~~t~--------~~~FtNi~vID~ 376 (559)
T 2v5i_A 349 VTVQDCA----GAGMLAHTY--------NRVFSNITVIDC 376 (559)
T ss_dssp EEEESCS----SEEEEEEEE--------SCEEEEEEEESC
T ss_pred eEehhcc----CcceEEeec--------cceeeeeEEEec
Confidence 7777763 346655443 236777777654
No 87
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=62.32 E-value=66 Score=32.16 Aligned_cols=68 Identities=15% Similarity=0.090 Sum_probs=44.3
Q ss_pred ceeEEEEceEE-ecCCceEEeCCC---------------------ceeEEEEeeeecCCCcceecccCccCCCCcEEEEE
Q 012057 266 TKSVGIYNSMI-SNGDDCISIGTG---------------------CSDVDIADVTCGPSHGISIGSLGAHYSQACVSNIT 323 (472)
Q Consensus 266 s~nV~I~n~~i-~~gDD~I~i~s~---------------------s~nI~I~n~~~~~~~gi~iGs~~~~~~~~~i~nI~ 323 (472)
+-|..++|+.. +.-.|++.+++. -.|-.|+|+...++.|+.+|..| +.+.++||+
T Consensus 262 nYnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~~D~~laqYp~~qLP~nHii~Ni~~~~~lGVG~~~DG---~~~~v~ni~ 338 (543)
T 3riq_A 262 NYRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYTLAEYPWFQLPTQHIIRNIITRDCMGIGAWWDG---QKNIIDNVV 338 (543)
T ss_dssp CBSCEEEEEEEESCSSCSCEECSCCSSCCCCSSSCCTTTSCTTCCCCCCEEEEEEEESCSSCSSEECS---SSCEEEEEE
T ss_pred eeeEEEeccceEEEeecceeccCCCCCCccCCCCcchhhCchhhCchhhhhhhhheeccceeeeeecC---CCCeEeeEE
Confidence 45666666653 446777777762 25778888888888888887655 456777777
Q ss_pred EEeEEEecCCceEEEEe
Q 012057 324 VRNAIIRESDNGLRIKT 340 (472)
Q Consensus 324 i~n~~i~~~~~gi~I~~ 340 (472)
+++|- ..|+.+++
T Consensus 339 ~~dca----g~G~~~~~ 351 (543)
T 3riq_A 339 TYEAH----KEGMFDRG 351 (543)
T ss_dssp EESCS----SCSEEECS
T ss_pred eeccc----cCcceeec
Confidence 66552 23555543
No 88
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=61.39 E-value=40 Score=34.35 Aligned_cols=81 Identities=22% Similarity=0.277 Sum_probs=53.3
Q ss_pred ceeEEEEceEEe-cCCceEEeCCC-----------------------ceeEEEEeeeecCCCcceecccCccCCCCcEEE
Q 012057 266 TKSVGIYNSMIS-NGDDCISIGTG-----------------------CSDVDIADVTCGPSHGISIGSLGAHYSQACVSN 321 (472)
Q Consensus 266 s~nV~I~n~~i~-~gDD~I~i~s~-----------------------s~nI~I~n~~~~~~~gi~iGs~~~~~~~~~i~n 321 (472)
+-|..++++... .-.|++.+++. -.|-.|.|..+.++-|+.+|..| .++.++|
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~slgvg~gmdg---~g~yvsn 452 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDG---KGMYVSN 452 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEE---ESCEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC---CCceEee
Confidence 445666666543 35677887773 25788899888888788887655 4567788
Q ss_pred EEEEeEEEecCCceEEEEeecCCCceeeeEEEEeEEEEcc
Q 012057 322 ITVRNAIIRESDNGLRIKTWQGGTGCVSDLSFENIQMENV 361 (472)
Q Consensus 322 I~i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f~Ni~~~~v 361 (472)
|+++||- ..|..+-+. +=+|.||++-+.
T Consensus 453 itv~dca----g~g~~~~~~--------~~~ftni~vid~ 480 (666)
T 2xc1_A 453 ITVEDCA----GSGAYLLTH--------ESVFTNIAIIDT 480 (666)
T ss_dssp EEEESCS----SEEEEEEEE--------SCEEEEEEEESC
T ss_pred eEehhcc----CcceEEeec--------cceeeeeEEEec
Confidence 8777763 246655443 235777777654
No 89
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=57.56 E-value=1.6e+02 Score=29.48 Aligned_cols=67 Identities=15% Similarity=0.217 Sum_probs=40.9
Q ss_pred ceeEEEEeeeecCC--CcceecccCcc-------------CCCCcEEEEEEEeEEEecCCceEEEEeecCCCceeeeEEE
Q 012057 289 CSDVDIADVTCGPS--HGISIGSLGAH-------------YSQACVSNITVRNAIIRESDNGLRIKTWQGGTGCVSDLSF 353 (472)
Q Consensus 289 s~nI~I~n~~~~~~--~gi~iGs~~~~-------------~~~~~i~nI~i~n~~i~~~~~gi~I~~~~g~~g~v~nI~f 353 (472)
+.|..++|...-.. +|+.+|+.... .-..--.|=.|+|+...++ .|+-+. |+|..++|+||++
T Consensus 262 nYnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~~D~~laqYp~~qLP~nHii~Ni~~~~~-lGVG~~-~DG~~~~v~ni~~ 339 (543)
T 3riq_A 262 NYRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYTLAEYPWFQLPTQHIIRNIITRDC-MGIGAW-WDGQKNIIDNVVT 339 (543)
T ss_dssp CBSCEEEEEEEESCSSCSCEECSCCSSCCCCSSSCCTTTSCTTCCCCCCEEEEEEEESC-SSCSSE-ECSSSCEEEEEEE
T ss_pred eeeEEEeccceEEEeecceeccCCCCCCccCCCCcchhhCchhhCchhhhhhhhheecc-ceeeee-ecCCCCeEeeEEe
Confidence 46888888875442 67777762111 0111224556888888887 555443 4677788888886
Q ss_pred EeEE
Q 012057 354 ENIQ 357 (472)
Q Consensus 354 ~Ni~ 357 (472)
+++.
T Consensus 340 ~dca 343 (543)
T 3riq_A 340 YEAH 343 (543)
T ss_dssp ESCS
T ss_pred eccc
Confidence 5543
No 90
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=54.20 E-value=6.2 Score=24.95 Aligned_cols=10 Identities=40% Similarity=0.614 Sum_probs=5.3
Q ss_pred cccccccccc
Q 012057 23 NVEARYHHHK 32 (472)
Q Consensus 23 ~~~~~~~~~~ 32 (472)
.-.||.|+|+
T Consensus 29 ywrgrrhhhh 38 (40)
T 2l9u_A 29 YWRGRRHHHH 38 (40)
T ss_dssp HHHHHHHCCS
T ss_pred EEcccccccc
Confidence 3467755443
No 91
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=48.22 E-value=18 Score=34.94 Aligned_cols=38 Identities=18% Similarity=0.184 Sum_probs=18.6
Q ss_pred CCCceEEeeeecccC-CCCcchHHHHHHHHHHHhhcCCcEEEecC
Q 012057 73 STDCIFDVRDYGAVG-DGSADDTAAFRAAWKAACAVEAGVVLAPS 116 (472)
Q Consensus 73 ~~~~~~~V~dfGA~g-DG~tDdT~Aiq~Ai~~a~~~~g~~V~iP~ 116 (472)
..++++-|. | || =|+| |-+.+-|..-| +.+-.+++|-.
T Consensus 46 ~~aKVIAIa--G-KGGVGKT--TtavNLA~aLA-~~GkkVllID~ 84 (314)
T 3fwy_A 46 TGAKVFAVY--G-KGGIGKS--TTSSNLSAAFS-ILGKRVLQIGC 84 (314)
T ss_dssp -CCEEEEEE--C-STTSSHH--HHHHHHHHHHH-HTTCCEEEEEE
T ss_pred CCceEEEEE--C-CCccCHH--HHHHHHHHHHH-HCCCeEEEEec
Confidence 346677774 7 54 3454 55554444422 23334555543
No 92
>2es4_D Lipase chaperone; protein-protein complex, steric chaperone, triacylglycerol hydrolase, all alpha helix protein, A/B hydrolase fold; 1.85A {Burkholderia glumae} SCOP: a.137.15.1
Probab=46.42 E-value=8.2 Score=37.83 Aligned_cols=7 Identities=29% Similarity=0.430 Sum_probs=2.8
Q ss_pred HHHHHHH
Q 012057 96 AFRAAWK 102 (472)
Q Consensus 96 Aiq~Ai~ 102 (472)
+++.-+|
T Consensus 84 ~lR~~FD 90 (332)
T 2es4_D 84 AVREFFD 90 (332)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3444443
No 93
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=41.66 E-value=1.4e+02 Score=28.69 Aligned_cols=39 Identities=15% Similarity=0.275 Sum_probs=20.0
Q ss_pred EEEEEEeEEEecCCc-eEEEEeecCCCceeeeEEEEeEEEE
Q 012057 320 SNITVRNAIIRESDN-GLRIKTWQGGTGCVSDLSFENIQME 359 (472)
Q Consensus 320 ~nI~i~n~~i~~~~~-gi~I~~~~g~~g~v~nI~f~Ni~~~ 359 (472)
++|+++|+.|.++.. |+.+-..+.. +.-....+++|+-+
T Consensus 166 ~dvsv~~i~fsn~~g~gfsliayp~~-~~p~g~~i~~irg~ 205 (542)
T 2x3h_A 166 SDVTVSDVNFSNVKGTGFSLIAYPND-APPDGLMIKGIRGS 205 (542)
T ss_dssp EEEEEEEEEEEEECSBEEEEEEECSS-SCCBSCEEEEEEEE
T ss_pred CcceEeeeeeeecCCCceeEEEcCCC-CCCCceEEeccccc
Confidence 567777777666532 5665554321 12233345555554
No 94
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=26.17 E-value=61 Score=30.33 Aligned_cols=28 Identities=18% Similarity=0.267 Sum_probs=21.6
Q ss_pred CcchHHHHHHHHHHHhhcCCcEEEecCC
Q 012057 90 SADDTAAFRAAWKAACAVEAGVVLAPSD 117 (472)
Q Consensus 90 ~tDdT~Aiq~Ai~~a~~~~g~~V~iP~G 117 (472)
...+.+.+.++++.|++.+-..|++|+-
T Consensus 35 ~~~Nl~~~~~~i~~A~~~gadlvvfPE~ 62 (281)
T 3p8k_A 35 SSKNETQITQWFEKNMNAEVDVVVLPEM 62 (281)
T ss_dssp HHHHHHHHHHHHHHHCCTTCCEEECCSS
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEEcCCC
Confidence 4457778888888777666789999984
No 95
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=20.57 E-value=1.4e+02 Score=26.99 Aligned_cols=35 Identities=11% Similarity=0.169 Sum_probs=24.4
Q ss_pred eEEeeeecccCCCCcchHHHHHHHHHHHhhcCCcEEEec
Q 012057 77 IFDVRDYGAVGDGSADDTAAFRAAWKAACAVEAGVVLAP 115 (472)
Q Consensus 77 ~~~V~dfGA~gDG~tDdT~Aiq~Ai~~a~~~~g~~V~iP 115 (472)
.+.+. ||+.|-|+| |++++.|..+ ...+-.++++.
T Consensus 29 ~l~vi-tG~MgsGKT--T~lL~~a~r~-~~~g~kVli~k 63 (214)
T 2j9r_A 29 WIEVI-CGSMFSGKS--EELIRRVRRT-QFAKQHAIVFK 63 (214)
T ss_dssp EEEEE-ECSTTSCHH--HHHHHHHHHH-HHTTCCEEEEE
T ss_pred EEEEE-ECCCCCcHH--HHHHHHHHHH-HHCCCEEEEEE
Confidence 34444 999999995 9999999985 34444455554
No 96
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=20.25 E-value=62 Score=30.22 Aligned_cols=34 Identities=21% Similarity=0.288 Sum_probs=25.5
Q ss_pred EEeeeecccCCCCcchHHHHHHHHHHHhhcCCcEEEecCC
Q 012057 78 FDVRDYGAVGDGSADDTAAFRAAWKAACAVEAGVVLAPSD 117 (472)
Q Consensus 78 ~~V~dfGA~gDG~tDdT~Aiq~Ai~~a~~~~g~~V~iP~G 117 (472)
+=+.+-||-.| +.+.+.+++||+.+|.++|+|+|
T Consensus 87 vv~~S~gaLad------~~l~~~L~~aA~~gg~~l~vpSG 120 (253)
T 1j5p_A 87 YIIISTSAFAD------EVFRERFFSELKNSPARVFFPSG 120 (253)
T ss_dssp EEECCGGGGGS------HHHHHHHHHHHHTCSCEEECCCT
T ss_pred EEEcChhhhcC------HHHHHHHHHHHHHCCCeEEecCC
Confidence 33445565443 56778888899999999999999
Done!