Query 012061
Match_columns 472
No_of_seqs 176 out of 1534
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 20:51:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012061.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012061hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1.4E-69 4.7E-74 532.3 36.6 424 8-466 11-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 1.1E-65 3.7E-70 513.6 40.7 437 8-467 4-469 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2.2E-63 7.6E-68 498.7 35.6 440 8-469 6-481 (482)
4 2acv_A Triterpene UDP-glucosyl 100.0 1.5E-63 5.1E-68 496.3 30.0 430 9-466 8-462 (463)
5 2c1x_A UDP-glucose flavonoid 3 100.0 1E-61 3.4E-66 481.8 35.7 432 7-467 4-452 (456)
6 2iya_A OLEI, oleandomycin glyc 100.0 7.9E-45 2.7E-49 360.1 31.1 391 8-463 10-418 (424)
7 4amg_A Snogd; transferase, pol 100.0 1.5E-45 5.2E-50 362.5 22.6 355 8-447 20-385 (400)
8 1iir_A Glycosyltransferase GTF 100.0 5.7E-43 2E-47 345.5 29.1 372 11-468 1-401 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 7.8E-42 2.7E-46 337.6 28.5 374 11-469 1-403 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 1.2E-41 4E-46 334.6 24.1 364 11-466 1-382 (404)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 1.7E-40 5.9E-45 328.1 30.1 379 5-465 15-412 (415)
12 2yjn_A ERYCIII, glycosyltransf 100.0 4.1E-40 1.4E-44 327.7 24.1 387 6-466 16-435 (441)
13 3ia7_A CALG4; glycosysltransfe 100.0 4.3E-39 1.5E-43 316.7 28.2 378 10-466 4-398 (402)
14 2p6p_A Glycosyl transferase; X 100.0 2.4E-38 8.1E-43 309.5 30.1 366 11-469 1-381 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 5.7E-38 2E-42 311.5 27.7 371 9-463 6-396 (430)
16 3oti_A CALG3; calicheamicin, T 100.0 5.7E-36 1.9E-40 294.0 25.2 350 5-461 15-392 (398)
17 4fzr_A SSFS6; structural genom 100.0 1.3E-36 4.5E-41 298.6 20.6 369 4-461 9-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 2E-34 6.9E-39 282.3 22.6 360 10-463 1-385 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 6.2E-33 2.1E-37 273.6 25.3 364 4-465 14-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 1.7E-30 5.9E-35 250.9 25.7 334 12-463 4-353 (365)
21 2o6l_A UDP-glucuronosyltransfe 100.0 1.5E-28 5.2E-33 211.2 16.1 158 264-445 11-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 1.5E-19 5.3E-24 174.6 29.5 338 11-467 7-356 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.6 1.9E-16 6.6E-21 138.9 8.2 142 271-427 25-196 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.6 4.5E-15 1.5E-19 135.9 15.2 115 273-404 156-272 (282)
25 3ot5_A UDP-N-acetylglucosamine 99.4 4.1E-12 1.4E-16 123.7 17.2 109 338-466 282-393 (403)
26 1v4v_A UDP-N-acetylglucosamine 99.4 2.9E-11 9.8E-16 117.0 22.1 107 338-464 255-364 (376)
27 1vgv_A UDP-N-acetylglucosamine 99.4 4E-12 1.4E-16 123.4 16.1 163 273-467 204-375 (384)
28 3dzc_A UDP-N-acetylglucosamine 99.4 9.5E-12 3.3E-16 120.9 18.5 104 338-461 288-394 (396)
29 3okp_A GDP-mannose-dependent a 99.4 1.2E-10 4.2E-15 113.0 23.8 355 8-470 2-381 (394)
30 3c48_A Predicted glycosyltrans 99.3 3.7E-10 1.3E-14 111.4 25.0 84 338-435 306-396 (438)
31 2gek_A Phosphatidylinositol ma 99.3 4.5E-09 1.5E-13 102.4 29.1 112 337-466 262-381 (406)
32 3beo_A UDP-N-acetylglucosamine 99.3 8.6E-10 2.9E-14 106.4 22.6 107 338-464 263-372 (375)
33 3fro_A GLGA glycogen synthase; 99.2 1.4E-08 4.8E-13 99.9 31.3 164 276-467 252-429 (439)
34 2x6q_A Trehalose-synthase TRET 99.1 8.5E-08 2.9E-12 93.8 31.0 111 337-467 292-413 (416)
35 2r60_A Glycosyl transferase, g 99.1 1.8E-08 6E-13 101.2 26.5 88 337-436 334-430 (499)
36 4hwg_A UDP-N-acetylglucosamine 99.1 1.3E-09 4.3E-14 105.1 14.8 346 13-466 11-375 (385)
37 2iuy_A Avigt4, glycosyltransfe 99.1 9.9E-09 3.4E-13 97.6 20.6 156 277-469 164-339 (342)
38 2jjm_A Glycosyl transferase, g 99.1 2.1E-07 7.1E-12 90.3 29.5 112 338-466 267-383 (394)
39 2iw1_A Lipopolysaccharide core 99.1 3.5E-07 1.2E-11 87.8 30.4 163 275-463 196-369 (374)
40 1rzu_A Glycogen synthase 1; gl 98.7 7.8E-06 2.7E-10 81.5 27.1 161 276-466 292-473 (485)
41 3s28_A Sucrose synthase 1; gly 98.7 5.9E-06 2E-10 86.5 26.1 88 337-436 639-740 (816)
42 2qzs_A Glycogen synthase; glyc 98.7 3.8E-05 1.3E-09 76.4 30.1 112 338-470 347-478 (485)
43 3oy2_A Glycosyltransferase B73 98.6 1.9E-05 6.7E-10 76.7 25.1 108 340-466 256-388 (413)
44 2f9f_A First mannosyl transfer 98.4 2.8E-06 9.5E-11 72.3 11.7 143 276-442 24-175 (177)
45 2hy7_A Glucuronosyltransferase 98.2 0.00017 5.9E-09 69.9 21.9 75 338-432 265-354 (406)
46 2xci_A KDO-transferase, 3-deox 98.2 0.001 3.4E-08 63.7 26.3 92 339-443 261-362 (374)
47 2vsy_A XCC0866; transferase, g 98.0 0.00025 8.5E-09 72.1 19.0 114 338-465 434-556 (568)
48 2bfw_A GLGA glycogen synthase; 97.8 0.00086 2.9E-08 57.7 16.2 83 339-436 96-187 (200)
49 3qhp_A Type 1 capsular polysac 97.7 0.00057 1.9E-08 56.8 13.0 136 275-438 2-148 (166)
50 4gyw_A UDP-N-acetylglucosamine 97.6 0.0037 1.2E-07 65.1 19.6 148 272-437 520-675 (723)
51 3q3e_A HMW1C-like glycosyltran 97.5 0.0021 7.3E-08 64.3 16.3 148 275-438 441-596 (631)
52 3rhz_A GTF3, nucleotide sugar 97.1 0.00078 2.7E-08 63.3 7.1 110 338-465 214-337 (339)
53 1psw_A ADP-heptose LPS heptosy 97.0 0.023 8E-07 53.4 16.2 104 11-138 1-107 (348)
54 3tov_A Glycosyl transferase fa 96.6 0.17 6E-06 47.4 19.2 107 8-138 6-116 (349)
55 1uqt_A Alpha, alpha-trehalose- 95.3 0.52 1.8E-05 46.3 16.0 109 340-468 333-454 (482)
56 2x0d_A WSAF; GT4 family, trans 94.4 0.015 5.1E-07 56.3 2.2 84 338-436 295-385 (413)
57 3vue_A GBSS-I, granule-bound s 93.0 1.6 5.6E-05 43.4 14.3 85 338-429 382-476 (536)
58 3t5t_A Putative glycosyltransf 92.0 5.9 0.0002 38.7 16.4 108 339-467 353-472 (496)
59 2gt1_A Lipopolysaccharide hept 89.1 2.3 7.9E-05 39.1 10.4 43 11-53 1-45 (326)
60 3vue_A GBSS-I, granule-bound s 87.5 0.66 2.3E-05 46.3 5.7 39 8-48 7-53 (536)
61 2x0d_A WSAF; GT4 family, trans 86.3 0.4 1.4E-05 46.1 3.3 41 8-48 44-89 (413)
62 4b4k_A N5-carboxyaminoimidazol 85.3 14 0.00048 30.2 14.4 143 274-450 22-176 (181)
63 1g5t_A COB(I)alamin adenosyltr 79.8 12 0.00041 31.4 9.4 39 10-48 28-66 (196)
64 1xmp_A PURE, phosphoribosylami 79.8 23 0.00077 28.7 13.1 145 274-450 11-165 (170)
65 3nb0_A Glycogen [starch] synth 77.9 8.2 0.00028 39.2 9.0 35 349-385 513-551 (725)
66 3rfo_A Methionyl-tRNA formyltr 74.9 15 0.00051 33.5 9.4 39 7-50 1-39 (317)
67 2wqk_A 5'-nucleotidase SURE; S 74.5 8.2 0.00028 33.9 7.2 40 11-52 2-41 (251)
68 3q0i_A Methionyl-tRNA formyltr 73.4 19 0.00067 32.8 9.7 37 8-49 5-41 (318)
69 1o4v_A Phosphoribosylaminoimid 72.8 38 0.0013 27.8 12.8 141 275-449 14-164 (183)
70 3oow_A Phosphoribosylaminoimid 71.0 39 0.0013 27.2 14.2 145 275-451 6-160 (166)
71 3lp6_A Phosphoribosylaminoimid 69.6 44 0.0015 27.2 12.0 140 275-448 8-157 (174)
72 3dfz_A SIRC, precorrin-2 dehyd 69.6 14 0.00046 31.8 7.3 150 267-447 26-186 (223)
73 2i2c_A Probable inorganic poly 67.8 4.8 0.00016 36.0 4.3 54 355-430 34-93 (272)
74 3auf_A Glycinamide ribonucleot 66.7 20 0.0007 30.8 7.9 106 8-141 20-132 (229)
75 3zqu_A Probable aromatic acid 66.0 7.4 0.00025 33.1 4.8 38 10-48 4-41 (209)
76 3ors_A N5-carboxyaminoimidazol 66.0 50 0.0017 26.5 12.0 138 276-448 5-155 (163)
77 3kuu_A Phosphoribosylaminoimid 65.6 53 0.0018 26.7 12.8 144 276-451 14-167 (174)
78 1fmt_A Methionyl-tRNA FMet for 64.4 32 0.0011 31.3 9.1 35 9-48 2-36 (314)
79 2g1u_A Hypothetical protein TM 63.0 8.3 0.00028 30.8 4.5 38 5-47 14-51 (155)
80 3tl4_X Glutaminyl-tRNA synthet 62.7 8 0.00027 32.1 4.3 66 387-464 100-176 (187)
81 4b4o_A Epimerase family protei 62.7 5.7 0.0002 35.7 3.8 34 11-48 1-34 (298)
82 1lss_A TRK system potassium up 62.6 6.3 0.00022 30.5 3.7 33 9-46 3-35 (140)
83 3l7i_A Teichoic acid biosynthe 61.7 9.2 0.00031 39.6 5.6 118 342-469 603-722 (729)
84 3eag_A UDP-N-acetylmuramate:L- 61.2 8.7 0.0003 35.2 4.8 34 8-45 2-35 (326)
85 3tqq_A Methionyl-tRNA formyltr 60.7 27 0.00093 31.7 7.9 35 10-49 2-36 (314)
86 1sbz_A Probable aromatic acid 59.2 12 0.00041 31.4 4.9 37 11-48 1-38 (197)
87 1id1_A Putative potassium chan 58.3 8.7 0.0003 30.5 3.8 32 11-47 4-35 (153)
88 1ccw_A Protein (glutamate muta 58.0 16 0.00054 28.6 5.2 38 10-47 3-40 (137)
89 3s40_A Diacylglycerol kinase; 57.8 40 0.0014 30.3 8.6 81 276-385 12-98 (304)
90 2ywr_A Phosphoribosylglycinami 57.4 30 0.001 29.4 7.2 103 11-141 2-111 (216)
91 3trh_A Phosphoribosylaminoimid 56.5 78 0.0027 25.6 12.4 142 275-448 7-158 (169)
92 2yxb_A Coenzyme B12-dependent 56.3 12 0.0004 30.3 4.2 40 8-47 16-55 (161)
93 3dfu_A Uncharacterized protein 55.4 8.6 0.00029 33.3 3.4 34 8-46 4-37 (232)
94 3qjg_A Epidermin biosynthesis 55.2 14 0.00049 30.3 4.6 44 11-55 6-49 (175)
95 4dim_A Phosphoribosylglycinami 55.1 37 0.0013 31.8 8.3 35 8-47 5-39 (403)
96 1u11_A PURE (N5-carboxyaminoim 54.5 88 0.003 25.6 13.6 142 275-451 22-176 (182)
97 4hb9_A Similarities with proba 54.5 8.5 0.00029 36.2 3.7 29 11-44 2-30 (412)
98 2i2x_B MTAC, methyltransferase 54.3 20 0.00067 31.6 5.7 40 8-47 121-160 (258)
99 3pdi_A Nitrogenase MOFE cofact 54.0 25 0.00086 34.2 6.9 29 105-137 395-424 (483)
100 3pdi_B Nitrogenase MOFE cofact 53.7 16 0.00054 35.4 5.4 84 12-138 315-399 (458)
101 1yt5_A Inorganic polyphosphate 53.6 9.4 0.00032 33.7 3.5 54 355-430 40-96 (258)
102 2r8r_A Sensor protein; KDPD, P 53.3 21 0.00073 30.7 5.5 39 10-48 6-44 (228)
103 4dll_A 2-hydroxy-3-oxopropiona 52.8 16 0.00055 33.3 5.1 33 8-45 29-61 (320)
104 4grd_A N5-CAIR mutase, phospho 52.7 91 0.0031 25.2 13.2 143 274-448 12-164 (173)
105 3av3_A Phosphoribosylglycinami 51.8 43 0.0015 28.3 7.3 103 11-141 4-113 (212)
106 1y80_A Predicted cobalamin bin 51.5 17 0.00058 30.7 4.7 39 9-47 87-125 (210)
107 3mc3_A DSRE/DSRF-like family p 51.3 29 0.00098 26.9 5.7 39 12-50 17-58 (134)
108 2gt1_A Lipopolysaccharide hept 50.4 9.7 0.00033 34.7 3.2 136 273-430 177-322 (326)
109 3lqk_A Dipicolinate synthase s 50.4 19 0.00066 30.3 4.8 42 10-52 7-49 (201)
110 1kjn_A MTH0777; hypotethical p 49.4 19 0.00066 28.4 4.1 40 9-48 5-46 (157)
111 3tov_A Glycosyl transferase fa 49.3 64 0.0022 29.6 8.8 100 11-141 186-289 (349)
112 3llv_A Exopolyphosphatase-rela 49.3 11 0.00038 29.3 3.0 32 10-46 6-37 (141)
113 3hn2_A 2-dehydropantoate 2-red 48.3 11 0.00036 34.4 3.1 33 11-48 3-35 (312)
114 1pjq_A CYSG, siroheme synthase 48.3 1.3E+02 0.0044 28.9 10.9 147 273-447 12-168 (457)
115 1mvl_A PPC decarboxylase athal 47.6 25 0.00087 29.7 5.1 42 10-53 19-60 (209)
116 3i83_A 2-dehydropantoate 2-red 47.3 10 0.00035 34.6 2.9 33 11-48 3-35 (320)
117 3g0o_A 3-hydroxyisobutyrate de 46.7 15 0.0005 33.2 3.8 33 8-45 5-37 (303)
118 3lrx_A Putative hydrogenase; a 46.4 16 0.00054 29.3 3.5 35 11-48 24-58 (158)
119 3kjh_A CO dehydrogenase/acetyl 46.2 16 0.00054 31.6 3.8 38 11-48 1-38 (254)
120 3kcq_A Phosphoribosylglycinami 45.7 39 0.0013 28.7 6.0 104 5-141 3-113 (215)
121 2iz6_A Molybdenum cofactor car 45.6 34 0.0012 28.0 5.5 45 341-385 92-140 (176)
122 1jkx_A GART;, phosphoribosylgl 45.4 62 0.0021 27.4 7.3 103 11-141 1-110 (212)
123 3fwz_A Inner membrane protein 45.4 16 0.00054 28.4 3.3 33 10-47 7-39 (140)
124 3vot_A L-amino acid ligase, BL 45.1 1.3E+02 0.0045 28.2 10.5 34 10-48 5-38 (425)
125 3mcu_A Dipicolinate synthase, 44.8 22 0.00074 30.1 4.2 38 11-49 6-44 (207)
126 1mio_A Nitrogenase molybdenum 44.7 21 0.00071 35.3 4.7 31 103-137 448-479 (533)
127 3ezx_A MMCP 1, monomethylamine 44.5 28 0.00096 29.6 5.0 41 7-47 89-129 (215)
128 3doj_A AT3G25530, dehydrogenas 44.3 20 0.00068 32.5 4.3 34 7-45 18-51 (310)
129 4g6h_A Rotenone-insensitive NA 44.2 14 0.00047 36.3 3.3 36 8-48 40-75 (502)
130 4g65_A TRK system potassium up 44.1 6.7 0.00023 38.0 1.1 33 9-46 2-34 (461)
131 3ty2_A 5'-nucleotidase SURE; s 43.9 35 0.0012 29.9 5.5 43 8-52 9-51 (261)
132 2ew2_A 2-dehydropantoate 2-red 43.9 16 0.00056 32.9 3.7 32 10-46 3-34 (316)
133 1z82_A Glycerol-3-phosphate de 43.3 18 0.0006 33.2 3.8 32 10-46 14-45 (335)
134 3l6d_A Putative oxidoreductase 42.9 16 0.00054 33.1 3.3 35 6-45 5-39 (306)
135 3hwr_A 2-dehydropantoate 2-red 42.6 18 0.00061 33.0 3.7 32 8-44 17-48 (318)
136 3qha_A Putative oxidoreductase 42.4 19 0.00064 32.4 3.7 32 10-46 15-46 (296)
137 3l4b_C TRKA K+ channel protien 42.2 9.5 0.00032 32.5 1.6 31 11-46 1-31 (218)
138 1ks9_A KPA reductase;, 2-dehyd 42.2 18 0.00063 32.1 3.7 32 11-47 1-32 (291)
139 1f0y_A HCDH, L-3-hydroxyacyl-C 42.0 17 0.0006 32.7 3.5 32 10-46 15-46 (302)
140 2vqe_B 30S ribosomal protein S 40.9 60 0.002 28.4 6.5 32 110-141 158-190 (256)
141 1bg6_A N-(1-D-carboxylethyl)-L 40.9 20 0.00068 33.1 3.8 32 10-46 4-35 (359)
142 2p90_A Hypothetical protein CG 40.6 1.5E+02 0.0052 26.8 9.5 147 274-444 102-266 (319)
143 3rg8_A Phosphoribosylaminoimid 40.4 1.4E+02 0.0048 23.8 13.8 137 276-447 4-149 (159)
144 2ejb_A Probable aromatic acid 40.4 40 0.0014 27.9 5.2 36 12-48 3-38 (189)
145 3l4e_A Uncharacterized peptida 39.1 53 0.0018 27.6 5.8 45 264-308 18-62 (206)
146 3cky_A 2-hydroxymethyl glutara 39.1 32 0.0011 30.7 4.8 32 9-45 3-34 (301)
147 3u7q_B Nitrogenase molybdenum- 38.9 1.7E+02 0.0058 28.6 10.2 32 12-48 366-397 (523)
148 2h78_A Hibadh, 3-hydroxyisobut 38.8 25 0.00085 31.6 4.0 32 9-45 2-33 (302)
149 1pno_A NAD(P) transhydrogenase 38.2 35 0.0012 27.5 4.1 36 12-47 25-63 (180)
150 2vsy_A XCC0866; transferase, g 38.1 41 0.0014 33.2 5.9 42 6-47 201-246 (568)
151 2raf_A Putative dinucleotide-b 37.9 25 0.00086 29.6 3.7 31 10-45 19-49 (209)
152 3ic5_A Putative saccharopine d 37.6 27 0.00094 25.6 3.5 32 10-46 5-37 (118)
153 2an1_A Putative kinase; struct 37.4 20 0.00069 32.1 3.1 28 356-383 63-94 (292)
154 1d4o_A NADP(H) transhydrogenas 37.3 36 0.0012 27.4 4.1 36 12-47 24-62 (184)
155 3bbn_B Ribosomal protein S2; s 37.2 1.5E+02 0.0052 25.3 8.4 32 110-141 157-189 (231)
156 3k96_A Glycerol-3-phosphate de 37.2 23 0.00077 32.9 3.5 33 9-46 28-60 (356)
157 2qv7_A Diacylglycerol kinase D 37.0 1.1E+02 0.0039 27.7 8.3 30 356-385 80-115 (337)
158 2etv_A Iron(III) ABC transport 36.8 19 0.00064 33.3 2.8 35 104-139 90-125 (346)
159 1u0t_A Inorganic polyphosphate 36.6 19 0.00064 32.7 2.8 30 355-384 74-107 (307)
160 1ryi_A Glycine oxidase; flavop 36.3 22 0.00074 33.0 3.3 38 4-46 11-48 (382)
161 2l82_A Designed protein OR32; 36.3 69 0.0024 23.3 5.1 33 276-312 3-35 (162)
162 1qkk_A DCTD, C4-dicarboxylate 35.8 1.2E+02 0.0041 23.2 7.3 58 375-440 74-131 (155)
163 2hy5_A Putative sulfurtransfer 35.8 65 0.0022 24.6 5.5 33 15-47 6-41 (130)
164 3c24_A Putative oxidoreductase 35.7 34 0.0012 30.4 4.3 31 10-45 11-42 (286)
165 3psh_A Protein HI_1472; substr 35.5 27 0.00093 31.7 3.7 38 102-139 76-113 (326)
166 1qgu_B Protein (nitrogenase mo 35.3 1.7E+02 0.0059 28.6 9.6 33 12-49 362-394 (519)
167 1p9o_A Phosphopantothenoylcyst 35.3 28 0.00096 31.6 3.6 37 13-49 40-90 (313)
168 3ghy_A Ketopantoate reductase 35.3 25 0.00084 32.3 3.4 32 10-46 3-34 (335)
169 2fsv_C NAD(P) transhydrogenase 35.1 40 0.0014 27.8 4.1 36 12-47 48-86 (203)
170 3afo_A NADH kinase POS5; alpha 35.0 24 0.00084 33.1 3.3 30 355-384 113-147 (388)
171 4hn9_A Iron complex transport 34.9 26 0.00087 32.1 3.4 37 103-140 109-145 (335)
172 2qyt_A 2-dehydropantoate 2-red 34.8 18 0.0006 32.7 2.3 33 9-46 7-45 (317)
173 3q2i_A Dehydrogenase; rossmann 34.8 2.6E+02 0.0089 25.3 11.1 107 275-404 15-131 (354)
174 3tqr_A Phosphoribosylglycinami 34.7 64 0.0022 27.4 5.6 40 102-141 74-114 (215)
175 1yb4_A Tartronic semialdehyde 34.7 28 0.00096 31.0 3.6 31 10-45 3-33 (295)
176 3bzy_A ESCU; auto cleavage pro 34.6 87 0.003 19.9 4.7 35 412-446 4-38 (54)
177 1jay_A Coenzyme F420H2:NADP+ o 34.6 32 0.0011 28.8 3.8 31 11-46 1-32 (212)
178 3s2u_A UDP-N-acetylglucosamine 34.5 56 0.0019 30.2 5.8 32 351-382 87-121 (365)
179 3ew7_A LMO0794 protein; Q8Y8U8 34.3 57 0.0019 27.1 5.4 33 11-47 1-33 (221)
180 2q8p_A Iron-regulated surface 34.3 21 0.00073 31.1 2.7 38 103-140 53-90 (260)
181 3qvl_A Putative hydantoin race 34.2 1.5E+02 0.0052 25.5 8.2 37 11-47 2-39 (245)
182 1djl_A Transhydrogenase DIII; 34.1 42 0.0014 27.7 4.1 36 12-47 47-85 (207)
183 1pzg_A LDH, lactate dehydrogen 34.1 24 0.00084 32.3 3.1 40 1-46 1-41 (331)
184 1g63_A Epidermin modifying enz 34.0 38 0.0013 27.9 4.0 42 12-54 4-45 (181)
185 2bln_A Protein YFBG; transfera 33.6 1.5E+02 0.005 26.7 8.2 33 11-48 1-33 (305)
186 4dzz_A Plasmid partitioning pr 33.5 49 0.0017 27.3 4.8 37 11-47 1-39 (206)
187 2bon_A Lipid kinase; DAG kinas 33.4 1.7E+02 0.0058 26.5 8.8 30 356-385 82-119 (332)
188 2vns_A Metalloreductase steap3 33.3 29 0.00098 29.4 3.3 33 9-46 27-59 (215)
189 3u3x_A Oxidoreductase; structu 33.2 1.6E+02 0.0054 27.0 8.7 109 275-404 28-144 (361)
190 1eiw_A Hypothetical protein MT 33.1 62 0.0021 24.1 4.7 64 355-429 37-109 (111)
191 3md9_A Hemin-binding periplasm 32.9 34 0.0012 29.7 3.8 37 102-139 51-89 (255)
192 1txg_A Glycerol-3-phosphate de 32.8 25 0.00086 32.0 3.0 31 11-46 1-31 (335)
193 1wrd_A TOM1, target of MYB pro 32.6 49 0.0017 24.3 3.9 35 414-452 2-36 (103)
194 3h2s_A Putative NADH-flavin re 32.3 64 0.0022 26.9 5.4 32 11-46 1-32 (224)
195 2r85_A PURP protein PF1517; AT 32.3 38 0.0013 30.6 4.2 32 10-47 2-33 (334)
196 1qzu_A Hypothetical protein MD 31.9 39 0.0013 28.5 3.8 43 10-53 19-62 (206)
197 3euw_A MYO-inositol dehydrogen 31.8 2.9E+02 0.0098 24.9 11.0 107 275-404 6-121 (344)
198 2l2q_A PTS system, cellobiose- 31.7 66 0.0023 23.7 4.7 36 9-44 3-38 (109)
199 3sz8_A 2-dehydro-3-deoxyphosph 31.6 2.7E+02 0.0094 24.6 11.9 55 373-427 192-269 (285)
200 2gk4_A Conserved hypothetical 31.5 35 0.0012 29.4 3.4 26 21-48 28-53 (232)
201 3pef_A 6-phosphogluconate dehy 31.4 35 0.0012 30.3 3.7 31 11-46 2-32 (287)
202 4gbj_A 6-phosphogluconate dehy 31.3 45 0.0015 29.9 4.4 29 12-45 7-35 (297)
203 3h5n_A MCCB protein; ubiquitin 31.1 2E+02 0.0069 26.3 8.9 32 10-46 118-150 (353)
204 2bru_C NAD(P) transhydrogenase 31.0 40 0.0014 27.2 3.3 37 12-48 32-71 (186)
205 2q6t_A DNAB replication FORK h 31.0 1.1E+02 0.0039 29.0 7.5 38 12-49 202-240 (444)
206 1mv8_A GMD, GDP-mannose 6-dehy 30.7 47 0.0016 31.7 4.6 30 11-45 1-30 (436)
207 2pju_A Propionate catabolism o 30.5 80 0.0027 27.0 5.6 31 355-386 62-92 (225)
208 1p3y_1 MRSD protein; flavoprot 30.5 46 0.0016 27.8 3.9 38 10-48 8-45 (194)
209 3rp8_A Flavoprotein monooxygen 30.3 36 0.0012 31.9 3.8 34 7-45 20-53 (407)
210 2rjn_A Response regulator rece 30.2 1.3E+02 0.0046 22.9 6.7 53 375-435 78-131 (154)
211 2r7a_A Bacterial heme binding 30.1 40 0.0014 29.2 3.8 38 102-139 51-89 (256)
212 2bw0_A 10-FTHFDH, 10-formyltet 30.1 87 0.003 28.6 6.1 35 9-48 21-55 (329)
213 3ego_A Probable 2-dehydropanto 30.1 28 0.00096 31.4 2.8 32 10-47 2-33 (307)
214 2wam_A RV2714, conserved hypot 30.0 3.3E+02 0.011 25.0 10.6 172 274-467 142-341 (351)
215 3dtt_A NADP oxidoreductase; st 30.0 44 0.0015 28.9 4.0 33 9-46 18-50 (245)
216 3qsg_A NAD-binding phosphogluc 29.9 30 0.001 31.4 2.9 33 9-46 23-56 (312)
217 1psw_A ADP-heptose LPS heptosy 29.8 2.3E+02 0.008 25.3 9.3 37 11-47 181-222 (348)
218 2ahr_A Putative pyrroline carb 29.6 36 0.0012 29.6 3.4 32 9-45 2-33 (259)
219 3da8_A Probable 5'-phosphoribo 29.5 42 0.0014 28.5 3.6 40 102-141 80-120 (215)
220 3obb_A Probable 3-hydroxyisobu 29.5 58 0.002 29.3 4.8 29 11-44 4-32 (300)
221 3of5_A Dethiobiotin synthetase 29.4 55 0.0019 28.0 4.4 36 10-45 3-40 (228)
222 4gi5_A Quinone reductase; prot 29.3 80 0.0027 28.0 5.6 37 8-44 20-59 (280)
223 4ezb_A Uncharacterized conserv 29.2 38 0.0013 30.7 3.6 32 10-46 24-56 (317)
224 3iqw_A Tail-anchored protein t 29.0 57 0.002 29.8 4.7 39 11-49 16-55 (334)
225 2fb6_A Conserved hypothetical 28.9 62 0.0021 24.3 4.1 38 10-47 7-48 (117)
226 2cob_A LCOR protein; MLR2, KIA 28.9 70 0.0024 21.5 3.7 30 410-439 9-39 (70)
227 3e9m_A Oxidoreductase, GFO/IDH 28.8 2E+02 0.0069 25.8 8.5 108 275-404 7-123 (330)
228 1cp2_A CP2, nitrogenase iron p 28.5 48 0.0017 28.9 4.1 35 13-47 4-38 (269)
229 2lnd_A De novo designed protei 28.4 1.4E+02 0.0048 20.4 5.2 47 375-428 50-99 (112)
230 2gf2_A Hibadh, 3-hydroxyisobut 28.3 37 0.0013 30.2 3.3 30 11-45 1-30 (296)
231 4e21_A 6-phosphogluconate dehy 28.2 44 0.0015 31.0 3.8 32 10-46 22-53 (358)
232 3ia7_A CALG4; glycosysltransfe 28.0 1.8E+02 0.0061 26.6 8.3 36 275-312 6-41 (402)
233 3pdu_A 3-hydroxyisobutyrate de 27.8 41 0.0014 29.9 3.4 31 11-46 2-32 (287)
234 3i6i_A Putative leucoanthocyan 27.6 63 0.0021 29.4 4.8 36 9-48 9-44 (346)
235 3ug7_A Arsenical pump-driving 27.6 79 0.0027 29.0 5.5 38 11-48 26-64 (349)
236 3c01_A Surface presentation of 27.6 1.1E+02 0.0038 18.8 4.4 31 416-446 2-32 (48)
237 3dqp_A Oxidoreductase YLBE; al 27.5 76 0.0026 26.4 5.0 33 11-47 1-33 (219)
238 3f8d_A Thioredoxin reductase ( 27.5 49 0.0017 29.4 4.0 31 11-46 16-46 (323)
239 1meo_A Phosophoribosylglycinam 27.4 1.5E+02 0.005 24.9 6.6 39 103-141 71-110 (209)
240 2qs7_A Uncharacterized protein 27.3 72 0.0025 24.9 4.4 35 13-47 11-45 (144)
241 2f1k_A Prephenate dehydrogenas 27.1 46 0.0016 29.3 3.7 30 11-45 1-30 (279)
242 3qrx_B Melittin; calcium-bindi 27.1 14 0.00048 18.8 0.1 18 365-382 1-18 (26)
243 3dhn_A NAD-dependent epimerase 27.0 69 0.0024 26.8 4.7 34 10-47 4-37 (227)
244 2phj_A 5'-nucleotidase SURE; S 26.9 93 0.0032 27.1 5.3 41 11-53 2-42 (251)
245 3l77_A Short-chain alcohol deh 26.8 69 0.0024 27.1 4.7 33 11-46 2-34 (235)
246 3g79_A NDP-N-acetyl-D-galactos 26.8 68 0.0023 31.1 5.0 34 9-47 17-52 (478)
247 1ydh_A AT5G11950; structural g 26.7 2.9E+02 0.0098 23.3 8.8 26 358-383 108-142 (216)
248 4hcj_A THIJ/PFPI domain protei 26.7 1.2E+02 0.004 24.7 5.8 40 7-47 4-44 (177)
249 1lld_A L-lactate dehydrogenase 26.6 37 0.0013 30.7 3.0 37 6-47 3-41 (319)
250 3lyu_A Putative hydrogenase; t 26.4 55 0.0019 25.5 3.6 34 11-47 19-52 (142)
251 2hmt_A YUAA protein; RCK, KTN, 26.4 38 0.0013 25.9 2.7 30 12-46 8-37 (144)
252 3sxp_A ADP-L-glycero-D-mannohe 26.3 1.2E+02 0.0042 27.5 6.7 43 1-47 1-45 (362)
253 3d7l_A LIN1944 protein; APC893 26.3 97 0.0033 25.3 5.4 33 9-46 2-34 (202)
254 2y0c_A BCEC, UDP-glucose dehyd 26.3 45 0.0016 32.3 3.7 32 10-46 8-39 (478)
255 3gg2_A Sugar dehydrogenase, UD 26.3 46 0.0016 32.0 3.7 31 11-46 3-33 (450)
256 4eg0_A D-alanine--D-alanine li 26.2 94 0.0032 27.9 5.7 37 10-46 13-53 (317)
257 3ka7_A Oxidoreductase; structu 26.2 43 0.0015 31.5 3.5 30 11-45 1-30 (425)
258 1i36_A Conserved hypothetical 26.1 35 0.0012 29.7 2.7 29 11-44 1-29 (264)
259 3c85_A Putative glutathione-re 26.1 34 0.0012 27.8 2.4 33 10-47 39-72 (183)
260 3gpi_A NAD-dependent epimerase 26.1 76 0.0026 27.8 5.0 33 10-47 3-35 (286)
261 2h31_A Multifunctional protein 26.1 4.2E+02 0.014 25.0 12.7 136 275-447 266-412 (425)
262 4e5v_A Putative THUA-like prot 26.0 74 0.0025 28.3 4.7 39 8-47 2-43 (281)
263 3pid_A UDP-glucose 6-dehydroge 25.8 49 0.0017 31.5 3.7 34 7-46 33-66 (432)
264 3kbq_A Protein TA0487; structu 25.8 2.4E+02 0.0082 22.8 7.4 83 276-385 6-98 (172)
265 2r79_A Periplasmic binding pro 25.8 53 0.0018 29.0 3.8 37 102-138 51-88 (283)
266 3e2i_A Thymidine kinase; Zn-bi 25.8 2.8E+02 0.0097 23.4 8.0 37 12-48 29-66 (219)
267 3guy_A Short-chain dehydrogena 25.6 57 0.002 27.6 3.9 33 11-46 1-33 (230)
268 3g17_A Similar to 2-dehydropan 25.6 21 0.00071 32.0 1.0 32 11-47 3-34 (294)
269 3ius_A Uncharacterized conserv 25.4 40 0.0014 29.7 2.9 33 10-47 5-37 (286)
270 3l9w_A Glutathione-regulated p 25.3 40 0.0014 32.0 3.0 34 9-47 3-36 (413)
271 1y1p_A ARII, aldehyde reductas 25.3 1.3E+02 0.0046 26.8 6.7 37 6-46 7-43 (342)
272 3mjf_A Phosphoribosylamine--gl 25.2 85 0.0029 29.8 5.4 26 9-39 2-27 (431)
273 3f67_A Putative dienelactone h 25.2 91 0.0031 25.9 5.2 35 12-46 33-67 (241)
274 3e8x_A Putative NAD-dependent 25.1 1E+02 0.0036 25.9 5.6 34 10-47 21-54 (236)
275 3grc_A Sensor protein, kinase; 25.1 2.1E+02 0.0072 21.1 7.1 47 376-429 80-126 (140)
276 2afh_E Nitrogenase iron protei 25.0 63 0.0022 28.5 4.2 36 13-48 5-40 (289)
277 1jx7_A Hypothetical protein YC 25.0 72 0.0024 23.5 3.9 27 21-47 15-43 (117)
278 2jk1_A HUPR, hydrogenase trans 24.9 2.1E+02 0.0072 21.1 7.4 48 375-430 71-119 (139)
279 3itj_A Thioredoxin reductase 1 24.8 34 0.0012 30.8 2.4 32 10-46 22-53 (338)
280 4e12_A Diketoreductase; oxidor 24.8 64 0.0022 28.5 4.2 31 10-45 4-34 (283)
281 3fgn_A Dethiobiotin synthetase 24.8 80 0.0027 27.5 4.6 39 8-46 23-63 (251)
282 3nrn_A Uncharacterized protein 24.8 50 0.0017 31.1 3.7 30 11-45 1-30 (421)
283 2vo1_A CTP synthase 1; pyrimid 24.7 86 0.0029 27.6 4.6 41 9-49 21-64 (295)
284 1gsa_A Glutathione synthetase; 24.7 63 0.0021 28.8 4.2 37 11-47 2-41 (316)
285 2jae_A L-amino acid oxidase; o 24.6 71 0.0024 30.8 4.8 34 7-45 8-41 (489)
286 3zq6_A Putative arsenical pump 24.6 72 0.0025 28.9 4.5 37 12-48 15-52 (324)
287 3fs2_A 2-dehydro-3-deoxyphosph 24.6 3.8E+02 0.013 23.9 11.0 53 375-427 213-288 (298)
288 3bfv_A CAPA1, CAPB2, membrane 24.5 83 0.0028 27.7 4.8 40 9-48 80-121 (271)
289 1qyd_A Pinoresinol-lariciresin 24.5 73 0.0025 28.3 4.6 34 10-47 4-37 (313)
290 3sbx_A Putative uncharacterize 24.5 1.1E+02 0.0037 25.3 5.1 34 10-44 13-50 (189)
291 3op4_A 3-oxoacyl-[acyl-carrier 24.4 1.2E+02 0.004 26.0 5.7 32 12-46 10-41 (248)
292 2zki_A 199AA long hypothetical 24.2 73 0.0025 26.1 4.2 37 10-47 4-41 (199)
293 3kkj_A Amine oxidase, flavin-c 24.1 41 0.0014 28.8 2.8 27 13-44 5-31 (336)
294 3c1o_A Eugenol synthase; pheny 24.0 77 0.0026 28.3 4.6 34 10-47 4-37 (321)
295 3ff5_A PEX14P, peroxisomal bio 24.0 72 0.0025 20.2 3.0 44 417-463 9-52 (54)
296 1ydh_A AT5G11950; structural g 23.7 1.2E+02 0.0041 25.6 5.4 34 11-44 10-47 (216)
297 4gwg_A 6-phosphogluconate dehy 23.7 46 0.0016 32.3 3.1 33 9-46 3-35 (484)
298 3m2t_A Probable dehydrogenase; 23.6 1.1E+02 0.0037 28.2 5.6 60 345-404 57-124 (359)
299 3tsa_A SPNG, NDP-rhamnosyltran 23.5 1E+02 0.0035 28.3 5.6 28 357-384 115-143 (391)
300 4huj_A Uncharacterized protein 23.5 33 0.0011 29.1 1.9 31 10-45 23-53 (220)
301 1f9y_A HPPK, protein (6-hydrox 23.4 1E+02 0.0036 24.6 4.6 28 276-303 2-29 (158)
302 3e18_A Oxidoreductase; dehydro 23.4 3.5E+02 0.012 24.6 9.2 106 275-404 7-121 (359)
303 2qx0_A 7,8-dihydro-6-hydroxyme 23.3 1.3E+02 0.0046 24.0 5.3 28 276-303 3-30 (159)
304 1vpd_A Tartronate semialdehyde 23.3 82 0.0028 27.9 4.6 30 11-45 6-35 (299)
305 3l18_A Intracellular protease 23.3 1.8E+02 0.0062 22.9 6.4 37 10-47 2-38 (168)
306 1wcv_1 SOJ, segregation protei 23.2 69 0.0024 27.7 4.0 39 10-48 5-45 (257)
307 3ea0_A ATPase, para family; al 23.2 65 0.0022 27.4 3.8 39 10-48 3-44 (245)
308 3dme_A Conserved exported prot 23.2 52 0.0018 30.0 3.4 32 10-46 4-35 (369)
309 1y56_B Sarcosine oxidase; dehy 23.1 52 0.0018 30.4 3.3 32 10-46 5-36 (382)
310 3i1j_A Oxidoreductase, short c 23.1 1.7E+02 0.0057 24.8 6.5 32 12-46 15-46 (247)
311 1fjh_A 3alpha-hydroxysteroid d 23.1 85 0.0029 26.9 4.6 33 11-46 1-33 (257)
312 2x4g_A Nucleoside-diphosphate- 23.1 1.2E+02 0.0039 27.3 5.7 35 9-47 12-46 (342)
313 3r6d_A NAD-dependent epimerase 23.0 1E+02 0.0036 25.6 5.1 34 10-46 4-38 (221)
314 3dm5_A SRP54, signal recogniti 23.0 1.2E+02 0.0039 29.1 5.7 42 10-51 100-141 (443)
315 2e6c_A 5'-nucleotidase SURE; S 22.9 1.3E+02 0.0043 26.1 5.4 41 11-53 1-41 (244)
316 3q9l_A Septum site-determining 22.7 87 0.003 26.9 4.6 37 12-48 3-41 (260)
317 1c0p_A D-amino acid oxidase; a 22.6 76 0.0026 29.0 4.4 33 9-46 5-37 (363)
318 1evy_A Glycerol-3-phosphate de 22.4 35 0.0012 31.6 1.9 30 12-46 17-46 (366)
319 3alj_A 2-methyl-3-hydroxypyrid 22.1 64 0.0022 29.8 3.8 32 9-45 10-41 (379)
320 4ao6_A Esterase; hydrolase, th 21.9 79 0.0027 27.2 4.1 35 12-46 57-93 (259)
321 3hn7_A UDP-N-acetylmuramate-L- 21.8 83 0.0029 30.8 4.6 33 10-46 19-51 (524)
322 3bul_A Methionine synthase; tr 21.7 89 0.0031 31.0 4.7 39 9-47 97-135 (579)
323 2o3j_A UDP-glucose 6-dehydroge 21.6 91 0.0031 30.2 4.8 32 9-45 8-41 (481)
324 3end_A Light-independent proto 21.5 93 0.0032 27.7 4.6 37 12-48 43-79 (307)
325 2woo_A ATPase GET3; tail-ancho 21.4 1.1E+02 0.0036 27.9 5.0 38 12-49 20-58 (329)
326 3nbm_A PTS system, lactose-spe 21.3 88 0.003 23.1 3.6 39 7-45 3-41 (108)
327 1g3q_A MIND ATPase, cell divis 21.3 1E+02 0.0035 25.9 4.7 35 13-47 5-40 (237)
328 3ahc_A Phosphoketolase, xylulo 21.3 5E+02 0.017 27.1 10.3 18 412-429 769-786 (845)
329 1j9j_A Stationary phase surviV 21.3 1.4E+02 0.0047 25.9 5.3 41 11-53 1-41 (247)
330 1vdc_A NTR, NADPH dependent th 21.2 31 0.0011 31.1 1.3 32 10-46 8-39 (333)
331 2w84_A Peroxisomal membrane pr 21.1 1.2E+02 0.004 20.4 3.6 48 416-466 13-60 (70)
332 2q3e_A UDP-glucose 6-dehydroge 21.1 85 0.0029 30.2 4.5 33 9-46 4-38 (467)
333 3mz0_A Inositol 2-dehydrogenas 21.1 3E+02 0.01 24.7 8.2 106 276-402 5-120 (344)
334 2p2s_A Putative oxidoreductase 21.0 4.5E+02 0.015 23.5 12.8 108 276-404 7-122 (336)
335 1zmt_A Haloalcohol dehalogenas 21.0 82 0.0028 27.1 4.0 32 11-45 1-32 (254)
336 3ezy_A Dehydrogenase; structur 21.0 2.4E+02 0.0082 25.5 7.5 107 276-404 5-120 (344)
337 1yqg_A Pyrroline-5-carboxylate 20.8 45 0.0015 29.0 2.2 30 11-45 1-31 (263)
338 2uyy_A N-PAC protein; long-cha 20.7 75 0.0026 28.5 3.8 31 10-45 30-60 (316)
339 3qbc_A 2-amino-4-hydroxy-6-hyd 20.6 1.3E+02 0.0043 24.2 4.6 27 276-302 6-32 (161)
340 2vrn_A Protease I, DR1199; cys 20.5 2.3E+02 0.0078 22.9 6.6 39 9-48 8-46 (190)
341 3gdo_A Uncharacterized oxidore 20.5 4.3E+02 0.015 23.9 9.1 61 344-404 53-121 (358)
342 3eya_A Pyruvate dehydrogenase 20.4 2.9E+02 0.0098 27.1 8.3 28 356-383 66-99 (549)
343 3ip0_A 2-amino-4-hydroxy-6-hyd 20.4 1.3E+02 0.0045 24.0 4.7 27 276-302 2-28 (158)
344 1cbk_A Protein (7,8-dihydro-6- 20.3 1.3E+02 0.0045 24.0 4.6 28 276-303 3-30 (160)
345 3ttc_A HYPF, transcriptional r 20.3 1.5E+02 0.005 30.0 6.0 56 93-148 339-394 (657)
346 1zi8_A Carboxymethylenebutenol 20.2 1.5E+02 0.0052 24.3 5.6 34 12-45 29-62 (236)
347 2a33_A Hypothetical protein; s 20.1 1.6E+02 0.0056 24.8 5.5 34 11-44 14-51 (215)
348 3ksu_A 3-oxoacyl-acyl carrier 20.1 1.2E+02 0.0041 26.2 4.9 32 12-46 12-43 (262)
349 1u7z_A Coenzyme A biosynthesis 20.0 76 0.0026 27.2 3.4 21 27-47 37-57 (226)
350 3vps_A TUNA, NAD-dependent epi 20.0 1.2E+02 0.004 26.9 5.0 34 10-47 7-40 (321)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1.4e-69 Score=532.32 Aligned_cols=424 Identities=25% Similarity=0.391 Sum_probs=334.1
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCC--CeEEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCCC-CCCCC
Q 012061 8 DSHPHVALIPSAGMGHLTPFLRLAASLVQHH--CRVTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPFD-PNSAN 84 (472)
Q Consensus 8 ~~~~~il~~~~~~~GHi~P~l~La~~L~~rG--h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 84 (472)
.+++||+++|+|++||++|++.||+.|+++| +.|||++++.+...+.+.. ....+ .+++...+.. +.+..
T Consensus 11 ~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~----~~~~~---~i~~~~ipdglp~~~~ 83 (454)
T 3hbf_A 11 NNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRS----NEFLP---NIKYYNVHDGLPKGYV 83 (454)
T ss_dssp -CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSS----SCCCT---TEEEEECCCCCCTTCC
T ss_pred CCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhccc----ccCCC---CceEEecCCCCCCCcc
Confidence 3468999999999999999999999999999 9999999864322221110 00012 3455544421 11111
Q ss_pred -CCChHHHHHHHHHHhHhhhhhhcC-------CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeCccHHHHHHHhhhhhhh
Q 012061 85 -ATDPFLLRWEAIRRSAHLLAPLLS-------PPLSALITDVTLISAVLPVTINLHLPNYVLFTASAKMFSLTASFPAIV 156 (472)
Q Consensus 85 -~~~~~~~~~~~~~~~~~~~~~ll~-------~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~p~~~ 156 (472)
..+....+...+....+.++++++ .++||||+|. +.+|+..+|+++|||++.|++++++.+..+.+.+...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~-~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~ 162 (454)
T 3hbf_A 84 SSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDA-FFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIR 162 (454)
T ss_dssp CCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEET-TCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHH
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECC-cchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHH
Confidence 112222223333333333444443 2799999999 7789999999999999999999999999888877544
Q ss_pred hccCCCCCCCCCCCCcee-CCCCCCCCCCCCCCCcc-CCchhHHHHHHHhcccccccceEEEcccccccHHHHHHHhccc
Q 012061 157 ASKSTSSGSVEFDDDFIE-IPGLPPIPLSSVPPAVM-DSKSLFATSFLENGNSFVKSNGVLINSFDALEADTLVALNGRR 234 (472)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~-~p~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~ 234 (472)
+..... ....+..+. +||++++...+++..+. +....+.+.+.+..+...+++++++||++++|+++++++++.
T Consensus 163 --~~~~~~-~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~- 238 (454)
T 3hbf_A 163 --EKTGSK-EVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSK- 238 (454)
T ss_dssp --HTCCHH-HHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTT-
T ss_pred --hhcCCC-ccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhc-
Confidence 221100 000112243 89999999999998775 444456677777777888999999999999999999988876
Q ss_pred ccCCCCCeeEecccCCCCccC--CCCCCccchhhhccCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeC
Q 012061 235 VVAGLPPVYAVGPLLPCEFEK--RDDPSTSLILKWLDDQPEGSVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKG 312 (472)
Q Consensus 235 ~~p~~p~v~~vGpl~~~~~~~--~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~ 312 (472)
.|++++|||++...... ..+.+ +.+||+.++++++|||||||....+.+++.+++.+|++++++|||+++.
T Consensus 239 ----~~~v~~vGPl~~~~~~~~~~~~~~---~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~ 311 (454)
T 3hbf_A 239 ----FKLLLNVGPFNLTTPQRKVSDEHG---CLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRG 311 (454)
T ss_dssp ----SSCEEECCCHHHHSCCSCCCCTTC---HHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCS
T ss_pred ----CCCEEEECCcccccccccccchHH---HHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 68999999997643222 11334 9999999999999999999999888999999999999999999999987
Q ss_pred CCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCcccchhhH
Q 012061 313 KNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFGDQKINA 392 (472)
Q Consensus 313 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na 392 (472)
. . .+.+|++|.++.+ +|+++.+|+||.++|+|+++++|||||||||++|++++|||||++|+++||+.||
T Consensus 312 ~-----~----~~~lp~~~~~~~~-~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na 381 (454)
T 3hbf_A 312 D-----P----KEKLPKGFLERTK-TKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNT 381 (454)
T ss_dssp C-----H----HHHSCTTHHHHTT-TTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHH
T ss_pred c-----c----hhcCCHhHHhhcC-CceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHH
Confidence 2 1 1347788877765 5777779999999999999999999999999999999999999999999999999
Q ss_pred HHHHhh-CeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHH
Q 012061 393 EAVERA-GLGMWVRSWGWGTELRAKGDEIGLKIKDLMAND---FLREQAKRIEEEARKAIGVGGSSERTFKELIDKWK 466 (472)
Q Consensus 393 ~~v~~~-G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (472)
+++++. |+|+.+ +...+++++|.++|+++|+|+ +||+||+++++++++++++||||++++++|++++.
T Consensus 382 ~~v~~~~g~Gv~l------~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 382 ILTESVLEIGVGV------DNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHHHTTSCSEEEC------GGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HHHHHhhCeeEEe------cCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 999995 999999 777899999999999999987 89999999999999999999999999999999885
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.1e-65 Score=513.56 Aligned_cols=437 Identities=30% Similarity=0.506 Sum_probs=330.1
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEEcCCC--Cccchhhhhhhhhhc-CCCccceEEeecCCCC-CC
Q 012061 8 DSHPHVALIPSAGMGHLTPFLRLAASLVQH-HCRVTLITTYPT--VSLAETQHVSHFLSA-YPQVTAKRFHLLPFDP-NS 82 (472)
Q Consensus 8 ~~~~~il~~~~~~~GHi~P~l~La~~L~~r-Gh~Vt~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~ 82 (472)
++++||+++|+|++||++|++.||++|++| ||+|||+++... .+.+++.. .. .+ .+.+...+... .+
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~-----~~~~~---~i~~~~l~~~~~~~ 75 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVL-----DSLPS---SISSVFLPPVDLTD 75 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHH-----C-CCT---TEEEEECCCCCCTT
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhc-----cccCC---CceEEEcCCCCCCC
Confidence 456899999999999999999999999998 999999999873 33333210 00 11 23333333211 11
Q ss_pred CCC-CChHHHHHHHHHHhHhhhhhhcC-C----CC-cEEEEcCCChhhhHHHHHhcCCCeEEEeCccHHHHHHHhhhhhh
Q 012061 83 ANA-TDPFLLRWEAIRRSAHLLAPLLS-P----PL-SALITDVTLISAVLPVTINLHLPNYVLFTASAKMFSLTASFPAI 155 (472)
Q Consensus 83 ~~~-~~~~~~~~~~~~~~~~~~~~ll~-~----~~-D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~p~~ 155 (472)
... .+....+...+....+.++++++ + ++ ||||+|. +..|+..+|+++|||++.+++++++.+..+.++|..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~-~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 154 (480)
T 2vch_A 76 LSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDL-FGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKL 154 (480)
T ss_dssp SCTTCCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECT-TCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECC-cchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHH
Confidence 111 12222233344444556777776 4 78 9999999 777999999999999999999999888777766643
Q ss_pred hhccCCCCCCCCCCCCceeCCCCCCCCCCCCCCCccCCchhHHHHHHHhcccccccceEEEcccccccHHHHHHHhcccc
Q 012061 156 VASKSTSSGSVEFDDDFIEIPGLPPIPLSSVPPAVMDSKSLFATSFLENGNSFVKSNGVLINSFDALEADTLVALNGRRV 235 (472)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~ 235 (472)
. +......... +....+|+++++...+++..+.+.....++.+......++++.++++|+++++|+..+..+.+.
T Consensus 155 ~--~~~~~~~~~~-~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~-- 229 (480)
T 2vch_A 155 D--ETVSCEFREL-TEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEP-- 229 (480)
T ss_dssp H--HHCCSCGGGC-SSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSC--
T ss_pred H--hcCCCccccc-CCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhc--
Confidence 3 2111000000 1124578888887777776554332234455555556677889999999999999988888762
Q ss_pred cCCCCCeeEecccCCCCcc---CCCCCCccchhhhccCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeC
Q 012061 236 VAGLPPVYAVGPLLPCEFE---KRDDPSTSLILKWLDDQPEGSVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKG 312 (472)
Q Consensus 236 ~p~~p~v~~vGpl~~~~~~---~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~ 312 (472)
.+..|++++|||++..... ...+.+ +.+||+.++++++|||||||+...+.+++.+++.+|++++++|||+++.
T Consensus 230 ~~~~~~v~~vGpl~~~~~~~~~~~~~~~---~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~ 306 (480)
T 2vch_A 230 GLDKPPVYPVGPLVNIGKQEAKQTEESE---CLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRS 306 (480)
T ss_dssp CTTCCCEEECCCCCCCSCSCC-----CH---HHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCcEEEEeccccccccccCccchhH---HHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECC
Confidence 2335789999999865422 112334 9999999988899999999998888999999999999999999999986
Q ss_pred CCCCcc-------hhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCc
Q 012061 313 KNVDKE-------DEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHF 385 (472)
Q Consensus 313 ~~~~~~-------~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~ 385 (472)
....+. ..+.+...+|++|.+++++.|+++.+|+||.+||+|++|++|||||||||++||+++|||||++|++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~ 386 (480)
T 2vch_A 307 PSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLY 386 (480)
T ss_dssp CCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred ccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEecccc
Confidence 321100 0011223578889888887788887799999999999999999999999999999999999999999
Q ss_pred ccchhhHHHH-HhhCeeeEEeecCCCCcC---CcCHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhccCCChHHHH
Q 012061 386 GDQKINAEAV-ERAGLGMWVRSWGWGTEL---RAKGDEIGLKIKDLMA---NDFLREQAKRIEEEARKAIGVGGSSERTF 458 (472)
Q Consensus 386 ~DQ~~na~~v-~~~G~G~~l~~~~~~~~~---~~~~~~l~~~i~~~l~---~~~~~~~a~~l~~~~~~~~~~~g~~~~~~ 458 (472)
+||+.||+++ ++.|+|+.+ +.. .+++++|+++|+++|+ +++||+||+++++++++++++||++.+++
T Consensus 387 ~DQ~~na~~l~~~~G~g~~l------~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~ 460 (480)
T 2vch_A 387 AEQKMNAVLLSEDIRAALRP------RAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKAL 460 (480)
T ss_dssp TTHHHHHHHHHHTTCCEECC------CCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHH
T ss_pred ccchHHHHHHHHHhCeEEEe------ecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 9999999997 688999999 433 7899999999999998 78999999999999999999999999999
Q ss_pred HHHHHHHHh
Q 012061 459 KELIDKWKC 467 (472)
Q Consensus 459 ~~~~~~~~~ 467 (472)
++|++.+.+
T Consensus 461 ~~~v~~~~~ 469 (480)
T 2vch_A 461 SLVALKWKA 469 (480)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998874
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2.2e-63 Score=498.69 Aligned_cols=440 Identities=25% Similarity=0.453 Sum_probs=316.4
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCC--CCCC--C
Q 012061 8 DSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPF--DPNS--A 83 (472)
Q Consensus 8 ~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~ 83 (472)
.+++||+++|+|++||++|++.||++|++|||+|||++++.+...+.+..........+ .+++...+. +... .
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~---~i~~~~l~~~lp~~~~~~ 82 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFT---DFNFESIPDGLTPMEGDG 82 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC---------------CEEEEEECCCCC------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCC---ceEEEECCCCCCCccccc
Confidence 44679999999999999999999999999999999999886543332210000000001 223332221 1100 0
Q ss_pred CCCChHHHHHHHH-HHhHhhhhhhcC-C-------CCcEEEEcCCChhhhHHHHHhcCCCeEEEeCccHHHHHHHhhhhh
Q 012061 84 NATDPFLLRWEAI-RRSAHLLAPLLS-P-------PLSALITDVTLISAVLPVTINLHLPNYVLFTASAKMFSLTASFPA 154 (472)
Q Consensus 84 ~~~~~~~~~~~~~-~~~~~~~~~ll~-~-------~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~p~ 154 (472)
.....+..+...+ ....+.++++++ + ++||||+|. +..|+..+|+++|||++.+++++++....+.+++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~-~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 161 (482)
T 2pq6_A 83 DVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDC-CMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRS 161 (482)
T ss_dssp ---CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEET-TCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHH
T ss_pred CcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECC-cchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHH
Confidence 1111222223332 233456666666 3 699999999 77799999999999999999999887766554443
Q ss_pred hhhccCCCCCCC-----CCCCCce-eCCCCCCCCCCCCCCCccCC--chhHHHHHHHhcccccccceEEEcccccccHHH
Q 012061 155 IVASKSTSSGSV-----EFDDDFI-EIPGLPPIPLSSVPPAVMDS--KSLFATSFLENGNSFVKSNGVLINSFDALEADT 226 (472)
Q Consensus 155 ~~~~~~~~~~~~-----~~~~~~~-~~p~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~ 226 (472)
.......+.... .+.+... .+|+++++...+++..+... ...+.+.+........+++++++|++++||++.
T Consensus 162 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~ 241 (482)
T 2pq6_A 162 FVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDV 241 (482)
T ss_dssp HHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHH
T ss_pred HHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHH
Confidence 210011111000 0001112 25777666666666554321 233444444455556788999999999999999
Q ss_pred HHHHhcccccCCCCCeeEecccCCC-Ccc----------CCCCCCccchhhhccCCCCCceEEEeecccccCCHHHHHHH
Q 012061 227 LVALNGRRVVAGLPPVYAVGPLLPC-EFE----------KRDDPSTSLILKWLDDQPEGSVVYVSFGSRLALSMEQTKEL 295 (472)
Q Consensus 227 ~~~~~~~~~~p~~p~v~~vGpl~~~-~~~----------~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~ 295 (472)
++.+++. .|++++|||++.. +.. ....+++..+.+||+.++++++|||||||....+.+++.++
T Consensus 242 ~~~~~~~-----~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~ 316 (482)
T 2pq6_A 242 INALSST-----IPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEF 316 (482)
T ss_dssp HHHHHTT-----CTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHH
T ss_pred HHHHHHh-----CCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHH
Confidence 8888766 5889999999753 111 01101122389999999888999999999988888889999
Q ss_pred HHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcccCcCcEEeecCcchHHHHHHh
Q 012061 296 GDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARH 375 (472)
Q Consensus 296 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~ 375 (472)
+.+|++++++|+|+++.....+.. ..+|++|.++.. +|+++.+|+||.++|+|++|++|||||||||++|++++
T Consensus 317 ~~~l~~~~~~~l~~~~~~~~~~~~-----~~l~~~~~~~~~-~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~ 390 (482)
T 2pq6_A 317 AWGLANCKKSFLWIIRPDLVIGGS-----VIFSSEFTNEIA-DRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICA 390 (482)
T ss_dssp HHHHHHTTCEEEEECCGGGSTTTG-----GGSCHHHHHHHT-TTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHH
T ss_pred HHHHHhcCCcEEEEEcCCcccccc-----ccCcHhHHHhcC-CCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHc
Confidence 999999999999999862110100 225677766653 68888899999999999999999999999999999999
Q ss_pred CCcEEecCCcccchhhHHHHH-hhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHhccC
Q 012061 376 GVPLLVWPHFGDQKINAEAVE-RAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMAND---FLREQAKRIEEEARKAIGVG 451 (472)
Q Consensus 376 GvP~l~~P~~~DQ~~na~~v~-~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~~~~~~~~ 451 (472)
|||||++|+++||+.||++++ +.|+|+.+ + ..+++++|.++|+++|+|+ +||+||+++++++++++++|
T Consensus 391 GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l------~-~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~g 463 (482)
T 2pq6_A 391 GVPMLCWPFFADQPTDCRFICNEWEIGMEI------D-TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPG 463 (482)
T ss_dssp TCCEEECCCSTTHHHHHHHHHHTSCCEEEC------C-SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred CCCEEecCcccchHHHHHHHHHHhCEEEEE------C-CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999997 68999999 6 5799999999999999988 69999999999999999999
Q ss_pred CChHHHHHHHHHHHHhcc
Q 012061 452 GSSERTFKELIDKWKCNN 469 (472)
Q Consensus 452 g~~~~~~~~~~~~~~~~~ 469 (472)
||+++++++|++++...+
T Consensus 464 Gss~~~l~~~v~~~~~~~ 481 (482)
T 2pq6_A 464 GCSYMNLNKVIKDVLLKQ 481 (482)
T ss_dssp CHHHHHHHHHHHHTTCC-
T ss_pred CcHHHHHHHHHHHHHhcC
Confidence 999999999999987554
No 4
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.5e-63 Score=496.31 Aligned_cols=430 Identities=28% Similarity=0.509 Sum_probs=323.0
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEEcCCCCcc-chhhhhhhhhhcCCCccceEEeecCCCCCCCCC
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQH--HCRVTLITTYPTVSL-AETQHVSHFLSAYPQVTAKRFHLLPFDPNSANA 85 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~r--Gh~Vt~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (472)
+++||+++|+|++||++|++.||+.|++| ||+|||++++.+... +.+ .+.++....+ .+++...+... ++.
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~-~~~~~~~~~~---~i~~~~lp~~~--~~~ 81 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADS-YIKSVLASQP---QIQLIDLPEVE--PPP 81 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHH-HHHHHHCSCT---TEEEEECCCCC--CCC
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhh-hhhhcccCCC---CceEEECCCCC--CCc
Confidence 46899999999999999999999999999 999999999875321 111 1111111112 34455444321 111
Q ss_pred C----ChHHHHHHHHHHhHhhhhhhcC----CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeCccHHHHHHHhhhhhhhh
Q 012061 86 T----DPFLLRWEAIRRSAHLLAPLLS----PPLSALITDVTLISAVLPVTINLHLPNYVLFTASAKMFSLTASFPAIVA 157 (472)
Q Consensus 86 ~----~~~~~~~~~~~~~~~~~~~ll~----~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~p~~~~ 157 (472)
. ..-..+...+....+.++++++ .++||||+|. +..|+..+|+++|||++++++++++.+..+.+++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~-~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~- 159 (463)
T 2acv_A 82 QELLKSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDF-FCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ- 159 (463)
T ss_dssp GGGGGSHHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEG-GGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSC-
T ss_pred ccccCCccHHHHHHHHhhhHHHHHHHHhccCCCCeEEEECC-cchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhc-
Confidence 1 1101133444445556777775 3799999999 7789999999999999999999998887777666432
Q ss_pred ccCCCCCCCCCCCC---ceeCCCC-CCCCCCCCCCCccCCchhHHHHHHHhcccccccceEEEcccccccHHHHHHHhcc
Q 012061 158 SKSTSSGSVEFDDD---FIEIPGL-PPIPLSSVPPAVMDSKSLFATSFLENGNSFVKSNGVLINSFDALEADTLVALNGR 233 (472)
Q Consensus 158 ~~~~~~~~~~~~~~---~~~~p~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~ 233 (472)
...... ..+. ...+|++ +++...+++..+... ...++.+.......++++++++|+++++|+..++.+.+.
T Consensus 160 -~~~~~~---~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~ 234 (463)
T 2acv_A 160 -IEEVFD---DSDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDH 234 (463)
T ss_dssp -TTCCCC---CSSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHH
T ss_pred -ccCCCC---CccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhc
Confidence 111000 0111 3457888 777666666443322 234445555555667888999999999999998888764
Q ss_pred cccCCCCCeeEecccCCCCc-cCCCC--CCccchhhhccCCCCCceEEEeecccc-cCCHHHHHHHHHHHHhCCCceEEE
Q 012061 234 RVVAGLPPVYAVGPLLPCEF-EKRDD--PSTSLILKWLDDQPEGSVVYVSFGSRL-ALSMEQTKELGDGLLSSGCRFLWV 309 (472)
Q Consensus 234 ~~~p~~p~v~~vGpl~~~~~-~~~~~--~~~~~~~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~~~~al~~~~~~~~~~ 309 (472)
+ +| .|++++|||+..... ..... .....+.+|++.++++++|||||||.. ..+.+++.+++.+|++.+++|||+
T Consensus 235 ~-~p-~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~ 312 (463)
T 2acv_A 235 D-EK-IPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWS 312 (463)
T ss_dssp C-TT-SCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred c-cc-CCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEE
Confidence 2 23 468999999986532 10000 111238999999988999999999998 778899999999999999999999
Q ss_pred EeCCCCCcchhHHHHhhhhHHHHHHhh-cCCceeccCCChHHHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCcccc
Q 012061 310 VKGKNVDKEDEESLKNVLGHELMEKIK-DQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFGDQ 388 (472)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ 388 (472)
++.. . +.+|++|.++.. .+++++.+|+||.++|+|+++++|||||||||++|++++|||||++|+++||
T Consensus 313 ~~~~-----~-----~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ 382 (463)
T 2acv_A 313 NSAE-----K-----KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQ 382 (463)
T ss_dssp CCCC-----G-----GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTH
T ss_pred ECCC-----c-----ccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhh
Confidence 9861 0 135566665541 2577788999999999999999999999999999999999999999999999
Q ss_pred hhhHHHH-HhhCeeeEEe-ecCCCCcC--CcCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHH
Q 012061 389 KINAEAV-ERAGLGMWVR-SWGWGTEL--RAKGDEIGLKIKDLMA-NDFLREQAKRIEEEARKAIGVGGSSERTFKELID 463 (472)
Q Consensus 389 ~~na~~v-~~~G~G~~l~-~~~~~~~~--~~~~~~l~~~i~~~l~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 463 (472)
+.||+++ ++.|+|+.+. .+ +.. .+++++|.++|+++|+ +++||+||+++++++++++++||||++++++|++
T Consensus 383 ~~Na~~lv~~~g~g~~l~~~~---~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~ 459 (463)
T 2acv_A 383 QLNAFRLVKEWGVGLGLRVDY---RKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLID 459 (463)
T ss_dssp HHHHHHHHHTSCCEEESCSSC---CTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCeEEEEeccc---CCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 9999995 8999999981 11 124 6899999999999997 5799999999999999999999999999999999
Q ss_pred HHH
Q 012061 464 KWK 466 (472)
Q Consensus 464 ~~~ 466 (472)
+++
T Consensus 460 ~~~ 462 (463)
T 2acv_A 460 DIT 462 (463)
T ss_dssp HHH
T ss_pred Hhc
Confidence 884
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1e-61 Score=481.84 Aligned_cols=432 Identities=25% Similarity=0.351 Sum_probs=309.2
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCe--EEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCCC-CCCC
Q 012061 7 FDSHPHVALIPSAGMGHLTPFLRLAASLVQHHCR--VTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPFD-PNSA 83 (472)
Q Consensus 7 ~~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~--Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 83 (472)
..+++||+++|+|++||++|++.||+.|++|||. ||+++++.....+.+... ....+ .+.+...+.. ++..
T Consensus 4 ~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~---~~~~~---~i~~~~i~~glp~~~ 77 (456)
T 2c1x_A 4 TTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSM---HTMQC---NIKSYDISDGVPEGY 77 (456)
T ss_dssp ---CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC----------CT---TEEEEECCCCCCTTC
T ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhcccc---ccCCC---ceEEEeCCCCCCCcc
Confidence 4456899999999999999999999999999765 577776532111111100 00011 2333333221 1110
Q ss_pred -CCCChHHHHHHHHHHhHhh----hhhhcC---CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeCccHHHHHHHhhhhhh
Q 012061 84 -NATDPFLLRWEAIRRSAHL----LAPLLS---PPLSALITDVTLISAVLPVTINLHLPNYVLFTASAKMFSLTASFPAI 155 (472)
Q Consensus 84 -~~~~~~~~~~~~~~~~~~~----~~~ll~---~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~p~~ 155 (472)
........+.......... ++++++ .+|||||+|. +..|+..+|+++|||++.+++++++.+..+.+.+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~-~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 156 (456)
T 2c1x_A 78 VFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADA-FIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEI 156 (456)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEET-TSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred cccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECC-chHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHH
Confidence 0112222222222222223 333332 2899999999 667999999999999999999988877665554432
Q ss_pred hhccCCCCCCCCCCCCceeCCCCCCCCCCCCCCCccC--CchhHHHHHHHhcccccccceEEEcccccccHHHHHHHhcc
Q 012061 156 VASKSTSSGSVEFDDDFIEIPGLPPIPLSSVPPAVMD--SKSLFATSFLENGNSFVKSNGVLINSFDALEADTLVALNGR 233 (472)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~ 233 (472)
..............+....+|++++++..+++..+.. ....+.+.+.+.....++++++++|+++++|++.++.+++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~ 236 (456)
T 2c1x_A 157 REKIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSK 236 (456)
T ss_dssp HHHHCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHH
T ss_pred HhccCCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhc
Confidence 2000100000001111113688877766677654431 12233344444444556789999999999999988888777
Q ss_pred cccCCCCCeeEecccCCCCccCCCCCCccchhhhccCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCC
Q 012061 234 RVVAGLPPVYAVGPLLPCEFEKRDDPSTSLILKWLDDQPEGSVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGK 313 (472)
Q Consensus 234 ~~~p~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~ 313 (472)
.|++++|||+.........+ ++..+.+|++.++++++|||||||....+.+++.+++.+|++.+++|+|+++..
T Consensus 237 -----~~~~~~vGpl~~~~~~~~~~-~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~ 310 (456)
T 2c1x_A 237 -----LKTYLNIGPFNLITPPPVVP-NTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK 310 (456)
T ss_dssp -----SSCEEECCCHHHHC----------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG
T ss_pred -----CCCEEEecCcccCccccccc-chhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCc
Confidence 57899999997543211111 111289999998888999999999988888999999999999999999999761
Q ss_pred CCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCcccchhhHH
Q 012061 314 NVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFGDQKINAE 393 (472)
Q Consensus 314 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 393 (472)
. ...+|++|.++.. +|+++.+|+||.++|+|++|++|||||||||++|++++|||||++|++.||+.||+
T Consensus 311 -----~----~~~l~~~~~~~~~-~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~ 380 (456)
T 2c1x_A 311 -----A----RVHLPEGFLEKTR-GYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGR 380 (456)
T ss_dssp -----G----GGGSCTTHHHHHT-TTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred -----c----hhhCCHHHHhhcC-CceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHH
Confidence 1 1235666766543 67888899999999999999999999999999999999999999999999999999
Q ss_pred HHHhh-CeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHh
Q 012061 394 AVERA-GLGMWVRSWGWGTELRAKGDEIGLKIKDLMAND---FLREQAKRIEEEARKAIGVGGSSERTFKELIDKWKC 467 (472)
Q Consensus 394 ~v~~~-G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 467 (472)
++++. |+|+.+ +...+++++|.++|+++|+|+ +||+||+++++++++++++||||++++++|++++.+
T Consensus 381 ~l~~~~g~g~~l------~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 381 MVEDVLEIGVRI------EGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp HHHHTSCCEEEC------GGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred HHHHHhCeEEEe------cCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 99999 999999 677899999999999999987 899999999999999999999999999999999864
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=7.9e-45 Score=360.07 Aligned_cols=391 Identities=16% Similarity=0.188 Sum_probs=255.9
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCCCC--CCCCC
Q 012061 8 DSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPFDP--NSANA 85 (472)
Q Consensus 8 ~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 85 (472)
.++|||++++++++||++|++.||++|+++||+|||++++.+.+.+++.|+ ++...... .+.... +..+
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~-~~~~~~~~-------~~~~~~~~~~~~- 80 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAAGA-TPVVYDSI-------LPKESNPEESWP- 80 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTC-EEEECCCC-------SCCTTCTTCCCC-
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCC-EEEecCcc-------ccccccchhhcc-
Confidence 346799999999999999999999999999999999999877666666554 21110000 000000 0011
Q ss_pred CChHH---HHHHHHHHhHhhhhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeCccHHHHHHHhhhhhhhhccCC
Q 012061 86 TDPFL---LRWEAIRRSAHLLAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYVLFTASAKMFSLTASFPAIVASKST 161 (472)
Q Consensus 86 ~~~~~---~~~~~~~~~~~~~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 161 (472)
.+... .+..........+.++++ .+||+||+|. +.+|+..+|+++|||++.+++.+.........++... ...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~-~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~--~~~ 157 (424)
T 2iya_A 81 EDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDI-ASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQ--DPT 157 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEET-TCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGS--CCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcC-cccHHHHHHHhcCCCEEEEeccccccccccccccccc--ccc
Confidence 11111 112222233446677777 8999999999 6679999999999999999877542111100000000 000
Q ss_pred CCCCCCCCCCceeCCCCCCCCCCCCCCCcc------CCchhHHHHHHHhcc------cccccceEEEcccccccHHHHHH
Q 012061 162 SSGSVEFDDDFIEIPGLPPIPLSSVPPAVM------DSKSLFATSFLENGN------SFVKSNGVLINSFDALEADTLVA 229 (472)
Q Consensus 162 ~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~------~~~~~~~~l~~s~~~le~~~~~~ 229 (472)
.+ .+ .+..++........... .....+.+.+.+... ....++.++++++++++++.
T Consensus 158 ~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~--- 225 (424)
T 2iya_A 158 AD----RG-----EEAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG--- 225 (424)
T ss_dssp C------------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG---
T ss_pred cc----cc-----cccccccccccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc---
Confidence 00 00 00000000000000000 000011111111100 01145678899998887651
Q ss_pred HhcccccCCCCCeeEecccCCCCccCCCCCCccchhhhccCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCceEEE
Q 012061 230 LNGRRVVAGLPPVYAVGPLLPCEFEKRDDPSTSLILKWLDDQPEGSVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWV 309 (472)
Q Consensus 230 ~~~~~~~p~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~ 309 (472)
. ...+++++|||+..... + ..+|++..+++++|||++||......+.+..+++++++.+.+++|+
T Consensus 226 -~-----~~~~~~~~vGp~~~~~~------~---~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~ 290 (424)
T 2iya_A 226 -D-----TVGDNYTFVGPTYGDRS------H---QGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLS 290 (424)
T ss_dssp -G-----GCCTTEEECCCCCCCCG------G---GCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEE
T ss_pred -c-----CCCCCEEEeCCCCCCcc------c---CCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEE
Confidence 1 11357999999764221 1 3457776667789999999998656888999999999888899998
Q ss_pred EeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCcccch
Q 012061 310 VKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFGDQK 389 (472)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~ 389 (472)
++.. .+.+.+. .+| +|+++.+|+||.++|+| +++||||||+||++|++++|+|+|++|...||+
T Consensus 291 ~g~~----~~~~~~~-~~~---------~~v~~~~~~~~~~~l~~--~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~ 354 (424)
T 2iya_A 291 VGRF----VDPADLG-EVP---------PNVEVHQWVPQLDILTK--ASAFITHAGMGSTMEALSNAVPMVAVPQIAEQT 354 (424)
T ss_dssp CCTT----SCGGGGC-SCC---------TTEEEESSCCHHHHHTT--CSEEEECCCHHHHHHHHHTTCCEEECCCSHHHH
T ss_pred ECCc----CChHHhc-cCC---------CCeEEecCCCHHHHHhh--CCEEEECCchhHHHHHHHcCCCEEEecCccchH
Confidence 8752 1111111 122 78999999999999976 556999999999999999999999999999999
Q ss_pred hhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHH
Q 012061 390 INAEAVERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELID 463 (472)
Q Consensus 390 ~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 463 (472)
.||+++++.|+|+.+ +...+++++|.++|+++|+|++++++++++++++++. +++.+.++.+.+
T Consensus 355 ~na~~l~~~g~g~~~------~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ 418 (424)
T 2iya_A 355 MNAERIVELGLGRHI------PRDQVTAEKLREAVLAVASDPGVAERLAAVRQEIREA----GGARAAADILEG 418 (424)
T ss_dssp HHHHHHHHTTSEEEC------CGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTS----CHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEc------CcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc----CcHHHHHHHHHH
Confidence 999999999999999 6677899999999999999999999999999997653 445554444433
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.5e-45 Score=362.52 Aligned_cols=355 Identities=19% Similarity=0.180 Sum_probs=218.8
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCCCCC---CCC
Q 012061 8 DSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPFDPN---SAN 84 (472)
Q Consensus 8 ~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 84 (472)
.+.|||+|+++|++||++|+++||++|++|||+|||++++.+.+..+ .|+ .+....+..... ....+.... ...
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~-~g~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 96 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE-AGL-CAVDVSPGVNYA-KLFVPDDTDVTDPMH 96 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT-TTC-EEEESSTTCCSH-HHHSCCC--------
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh-cCC-eeEecCCchhHh-hhccccccccccccc
Confidence 45799999999999999999999999999999999999987654332 333 111111110000 000000000 000
Q ss_pred CC-ChHHHHHHHH----HHhHhhhhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeCccHHHHHHHhhhhhhhhc
Q 012061 85 AT-DPFLLRWEAI----RRSAHLLAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYVLFTASAKMFSLTASFPAIVAS 158 (472)
Q Consensus 85 ~~-~~~~~~~~~~----~~~~~~~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~ 158 (472)
.. .....+...+ ......+.++++ .+||+||+|. +.+++..+|+.+|||++.+...+.........
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~-~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~------- 168 (400)
T 4amg_A 97 SEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTP-TQGAGPLTAAALQLPCVELPLGPADSEPGLGA------- 168 (400)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECT-TCTHHHHHHHHTTCCEEECCSSTTTCCHHHHH-------
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECc-chHHHHHHHHHcCCCceeecccccccccchhh-------
Confidence 00 0111111111 112234445555 6999999999 77799999999999998765543211100000
Q ss_pred cCCCCCCCCCCCCceeCCCCCCCCCCCCCCCccCCchhHHHHHHHhcccccccceEEEcccccccHHHHHHHhcccccCC
Q 012061 159 KSTSSGSVEFDDDFIEIPGLPPIPLSSVPPAVMDSKSLFATSFLENGNSFVKSNGVLINSFDALEADTLVALNGRRVVAG 238 (472)
Q Consensus 159 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~p~ 238 (472)
.....+.+...+................. .......+. ...
T Consensus 169 ---------------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~ 209 (400)
T 4amg_A 169 ---------------------------------LIRRAMSKDYERHGVTGEPTGSVRLTTTP----PSVEALLPE--DRR 209 (400)
T ss_dssp ---------------------------------HHHHHTHHHHHHTTCCCCCSCEEEEECCC----HHHHHTSCG--GGC
T ss_pred ---------------------------------HHHHHHHHHHHHhCCCcccccchhhcccC----chhhccCcc--ccc
Confidence 00000111111111111111111111111 111111100 001
Q ss_pred CCCeeEecccCCCCccCCCCCCccchhhhccCCCCCceEEEeecccccCC--HHHHHHHHHHHHhCCCceEEEEeCCCCC
Q 012061 239 LPPVYAVGPLLPCEFEKRDDPSTSLILKWLDDQPEGSVVYVSFGSRLALS--MEQTKELGDGLLSSGCRFLWVVKGKNVD 316 (472)
Q Consensus 239 ~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~--~~~~~~~~~al~~~~~~~~~~~~~~~~~ 316 (472)
.+..+.+.+..... ... +.+|++..+++++|||||||....+ .+.+.++++++++.+.+++|..+.....
T Consensus 210 ~~~~~~~~~~~~~~-----~~~---~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~ 281 (400)
T 4amg_A 210 SPGAWPMRYVPYNG-----GAV---LPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLA 281 (400)
T ss_dssp CTTCEECCCCCCCC-----CEE---CCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCC
T ss_pred CCcccCcccccccc-----ccc---CcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcccc
Confidence 12233333222111 112 6679999999999999999985443 4678889999999999999988762111
Q ss_pred cchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCcccchhhHHHHH
Q 012061 317 KEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFGDQKINAEAVE 396 (472)
Q Consensus 317 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~ 396 (472)
. . ..+| +|+++.+|+||.++|+| +++||||||+||++|++++|||||++|+++||+.||++++
T Consensus 282 ~-----~-~~~~---------~~v~~~~~~p~~~lL~~--~~~~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~ 344 (400)
T 4amg_A 282 L-----L-GELP---------ANVRVVEWIPLGALLET--CDAIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLT 344 (400)
T ss_dssp C-----C-CCCC---------TTEEEECCCCHHHHHTT--CSEEEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHH
T ss_pred c-----c-ccCC---------CCEEEEeecCHHHHhhh--hhheeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHH
Confidence 0 0 1233 78999999999999966 6669999999999999999999999999999999999999
Q ss_pred hhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 012061 397 RAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKA 447 (472)
Q Consensus 397 ~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~ 447 (472)
+.|+|+.+ +..++++ ++|+++|+|++||+||+++++++++.
T Consensus 345 ~~G~g~~l------~~~~~~~----~al~~lL~d~~~r~~a~~l~~~~~~~ 385 (400)
T 4amg_A 345 GLGIGFDA------EAGSLGA----EQCRRLLDDAGLREAALRVRQEMSEM 385 (400)
T ss_dssp HHTSEEEC------CTTTCSH----HHHHHHHHCHHHHHHHHHHHHHHHTS
T ss_pred HCCCEEEc------CCCCchH----HHHHHHHcCHHHHHHHHHHHHHHHcC
Confidence 99999999 6666665 46778999999999999999998864
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=5.7e-43 Score=345.48 Aligned_cols=372 Identities=17% Similarity=0.177 Sum_probs=244.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCCCCCCCCCCChHH
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPFDPNSANATDPFL 90 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (472)
|||+|+++++.||++|+++||++|+++||+|||++++...+.++..|+ ++....... .... ........ .
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g~-~~~~i~~~~-------~~~~-~~~~~~~~-~ 70 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVGV-PHVPVGPSA-------RAPI-QRAKPLTA-E 70 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTC-CEEECCC---------------CCSCCCH-H
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHcCC-eeeeCCCCH-------HHHh-hcccccch-H
Confidence 799999999999999999999999999999999999876555555554 211110000 0000 00011111 1
Q ss_pred HHHHHHHHh-HhhhhhhcC--CCCcEEEEcCCChhh--hHHHHHhcCCCeEEEeCccHHHHHHHhhhhhhhhccCCCCCC
Q 012061 91 LRWEAIRRS-AHLLAPLLS--PPLSALITDVTLISA--VLPVTINLHLPNYVLFTASAKMFSLTASFPAIVASKSTSSGS 165 (472)
Q Consensus 91 ~~~~~~~~~-~~~~~~ll~--~~~D~vI~D~~~~~~--~~~vA~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 165 (472)
.+...+... ...++++++ .+||+||+|.++.+| +..+|+++|||++.+++++..... .++|.
T Consensus 71 ~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~--~~~p~----------- 137 (415)
T 1iir_A 71 DVRRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS--PYYPP----------- 137 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC--SSSCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC--cccCC-----------
Confidence 111222211 223445553 589999999745667 889999999999999877533100 00000
Q ss_pred CCCCCCceeCCCCCCCCCCCCCC--CccCC-----chhHHHH-------HHHhc--ccc-------cccceEEEcccccc
Q 012061 166 VEFDDDFIEIPGLPPIPLSSVPP--AVMDS-----KSLFATS-------FLENG--NSF-------VKSNGVLINSFDAL 222 (472)
Q Consensus 166 ~~~~~~~~~~p~l~~~~~~~~~~--~~~~~-----~~~~~~~-------~~~~~--~~~-------~~~~~~l~~s~~~l 222 (472)
+.. ++ .++. ..+.. ....++. +.+.. ... ... .+++++++.+
T Consensus 138 ----------~~~-~~---~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l 202 (415)
T 1iir_A 138 ----------PPL-GE---PSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVL 202 (415)
T ss_dssp ----------CC-------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTT
T ss_pred ----------ccC-Cc---cccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhh
Confidence 000 00 0000 00000 0000000 11100 000 012 4678888887
Q ss_pred cH-HHHHHHhcccccCCCCCeeEecccCCCCccCCCCCCccchhhhccCCCCCceEEEeecccccCCHHHHHHHHHHHHh
Q 012061 223 EA-DTLVALNGRRVVAGLPPVYAVGPLLPCEFEKRDDPSTSLILKWLDDQPEGSVVYVSFGSRLALSMEQTKELGDGLLS 301 (472)
Q Consensus 223 e~-~~~~~~~~~~~~p~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~ 301 (472)
++ + .+.+ ++++|||+..... ...+.+ +.+|++.++ ++|||++||.. ...+.+..++++|++
T Consensus 203 ~~~~----------~~~~-~~~~vG~~~~~~~-~~~~~~---~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~~~~~al~~ 264 (415)
T 1iir_A 203 APLQ----------PTDL-DAVQTGAWILPDE-RPLSPE---LAAFLDAGP--PPVYLGFGSLG-APADAVRVAIDAIRA 264 (415)
T ss_dssp SCCC----------CCSS-CCEECCCCCCCCC-CCCCHH---HHHHHHTSS--CCEEEECC----CCHHHHHHHHHHHHH
T ss_pred cCCC----------cccC-CeEeeCCCccCcc-cCCCHH---HHHHHhhCC--CeEEEeCCCCC-CcHHHHHHHHHHHHH
Confidence 75 3 1233 8999999986532 122334 889997653 58999999987 567888889999999
Q ss_pred CCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcccCcCcEEeecCcchHHHHHHhCCcEEe
Q 012061 302 SGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLV 381 (472)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~ 381 (472)
.+.+++|+++... .. . ..+| +|+++.+|+||.++| +++++||||||+||++|++++|+|+|+
T Consensus 265 ~~~~~v~~~g~~~---~~---~-~~~~---------~~v~~~~~~~~~~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~i~ 326 (415)
T 1iir_A 265 HGRRVILSRGWAD---LV---L-PDDG---------ADCFAIGEVNHQVLF--GRVAAVIHHGGAGTTHVAARAGAPQIL 326 (415)
T ss_dssp TTCCEEECTTCTT---CC---C-SSCG---------GGEEECSSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEE
T ss_pred CCCeEEEEeCCCc---cc---c-cCCC---------CCEEEeCcCChHHHH--hhCCEEEeCCChhHHHHHHHcCCCEEE
Confidence 9999999887521 00 0 1122 688999999999999 778889999999999999999999999
Q ss_pred cCCcccchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHH
Q 012061 382 WPHFGDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKEL 461 (472)
Q Consensus 382 ~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 461 (472)
+|+..||+.||+++++.|+|+.+ +...+++++|.++|+++ +|++|++++++++++++. .++. ..+.+.
T Consensus 327 ~p~~~dQ~~na~~l~~~g~g~~~------~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~ 394 (415)
T 1iir_A 327 LPQMADQPYYAGRVAELGVGVAH------DGPIPTFDSLSAALATA-LTPETHARATAVAGTIRT----DGAA-VAARLL 394 (415)
T ss_dssp CCCSTTHHHHHHHHHHHTSEEEC------SSSSCCHHHHHHHHHHH-TSHHHHHHHHHHHHHSCS----CHHH-HHHHHH
T ss_pred CCCCCccHHHHHHHHHCCCcccC------CcCCCCHHHHHHHHHHH-cCHHHHHHHHHHHHHHhh----cChH-HHHHHH
Confidence 99999999999999999999999 66778999999999999 999999999999988643 2333 344455
Q ss_pred HHHHHhc
Q 012061 462 IDKWKCN 468 (472)
Q Consensus 462 ~~~~~~~ 468 (472)
++.+...
T Consensus 395 i~~~~~~ 401 (415)
T 1iir_A 395 LDAVSRE 401 (415)
T ss_dssp HHHHHTC
T ss_pred HHHHHhc
Confidence 5555433
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=7.8e-42 Score=337.55 Aligned_cols=374 Identities=16% Similarity=0.110 Sum_probs=247.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCCCCCCCCCCChHH
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPFDPNSANATDPFL 90 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (472)
|||+++++++.||++|+++||++|+++||+|+|++++.+.+.++..|+ ++....... ............. .
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g~-~~~~~~~~~-------~~~~~~~~~~~~~-~ 71 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVGV-PHVPVGLPQ-------HMMLQEGMPPPPP-E 71 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTC-CEEECSCCG-------GGCCCTTSCCCCH-H
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcCC-eeeecCCCH-------HHHHhhccccchh-H
Confidence 799999999999999999999999999999999999876555555554 211110000 0000000001111 1
Q ss_pred HHHHHHHHh-HhhhhhhcC--CCCcEEEEcCCChhh--hHHHHHhcCCCeEEEeCccHHHHHHHhhhhhhhhccCCCCCC
Q 012061 91 LRWEAIRRS-AHLLAPLLS--PPLSALITDVTLISA--VLPVTINLHLPNYVLFTASAKMFSLTASFPAIVASKSTSSGS 165 (472)
Q Consensus 91 ~~~~~~~~~-~~~~~~ll~--~~~D~vI~D~~~~~~--~~~vA~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 165 (472)
.+...+... ...++.+.+ .+||+||+|.++.++ +..+|+++|||++.+.+++..... .
T Consensus 72 ~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~--~--------------- 134 (416)
T 1rrv_A 72 EEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS--P--------------- 134 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC--S---------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC--c---------------
Confidence 111222221 223334442 589999999634566 888999999999988776532100 0
Q ss_pred CCCCCCceeCC-CCCCCCCCCCCC-CccCCc----h-hHHH-------HHHHhc--cc-------ccccceEEEcccccc
Q 012061 166 VEFDDDFIEIP-GLPPIPLSSVPP-AVMDSK----S-LFAT-------SFLENG--NS-------FVKSNGVLINSFDAL 222 (472)
Q Consensus 166 ~~~~~~~~~~p-~l~~~~~~~~~~-~~~~~~----~-~~~~-------~~~~~~--~~-------~~~~~~~l~~s~~~l 222 (472)
.+| .+. ++. .+. ..+... . ..++ .+.+.. .. .... .+++++++++
T Consensus 135 --------~~p~~~~-~~~--~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l 202 (416)
T 1rrv_A 135 --------HLPPAYD-EPT--TPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVL 202 (416)
T ss_dssp --------SSCCCBC-SCC--CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTT
T ss_pred --------ccCCCCC-CCC--CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccc
Confidence 011 100 000 000 000000 0 0000 011100 00 0122 5788888888
Q ss_pred cHHHHHHHhcccccCCCCCeeEecccCCCCccCCCCCCccchhhhccCCCCCceEEEeeccccc-CCHHHHHHHHHHHHh
Q 012061 223 EADTLVALNGRRVVAGLPPVYAVGPLLPCEFEKRDDPSTSLILKWLDDQPEGSVVYVSFGSRLA-LSMEQTKELGDGLLS 301 (472)
Q Consensus 223 e~~~~~~~~~~~~~p~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~~~~al~~ 301 (472)
+++ .+.. +++++||+..... ...+.+ +.+|++.++ ++|||++||... ...+.+..+++++++
T Consensus 203 ~~~----------~~~~-~~~~vG~~~~~~~-~~~~~~---~~~~l~~~~--~~v~v~~Gs~~~~~~~~~~~~~~~al~~ 265 (416)
T 1rrv_A 203 APL----------QPDV-DAVQTGAWLLSDE-RPLPPE---LEAFLAAGS--PPVHIGFGSSSGRGIADAAKVAVEAIRA 265 (416)
T ss_dssp SCC----------CSSC-CCEECCCCCCCCC-CCCCHH---HHHHHHSSS--CCEEECCTTCCSHHHHHHHHHHHHHHHH
T ss_pred cCC----------CCCC-CeeeECCCccCcc-CCCCHH---HHHHHhcCC--CeEEEecCCCCccChHHHHHHHHHHHHH
Confidence 754 1223 8999999986532 112334 889997653 689999999854 346778889999999
Q ss_pred CCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcccCcCcEEeecCcchHHHHHHhCCcEEe
Q 012061 302 SGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLV 381 (472)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~ 381 (472)
.+.+++|+++.... . . ..+| +|+.+.+|+||.++| +++++||||||+||++|++++|+|+|+
T Consensus 266 ~~~~~v~~~g~~~~---~---~-~~~~---------~~v~~~~~~~~~~ll--~~~d~~v~~~G~~t~~Ea~~~G~P~i~ 327 (416)
T 1rrv_A 266 QGRRVILSRGWTEL---V---L-PDDR---------DDCFAIDEVNFQALF--RRVAAVIHHGSAGTEHVATRAGVPQLV 327 (416)
T ss_dssp TTCCEEEECTTTTC---C---C-SCCC---------TTEEEESSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEE
T ss_pred CCCeEEEEeCCccc---c---c-cCCC---------CCEEEeccCChHHHh--ccCCEEEecCChhHHHHHHHcCCCEEE
Confidence 99999999876210 0 0 1123 788999999999999 668889999999999999999999999
Q ss_pred cCCcccchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHH
Q 012061 382 WPHFGDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKEL 461 (472)
Q Consensus 382 ~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 461 (472)
+|+..||+.||+++++.|+|+.+ +...+++++|.++|+++ +|++|+++++++++++++ .++. +.++.+
T Consensus 328 ~p~~~dQ~~na~~l~~~g~g~~~------~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~----~~~~-~~~~~i 395 (416)
T 1rrv_A 328 IPRNTDQPYFAGRVAALGIGVAH------DGPTPTFESLSAALTTV-LAPETRARAEAVAGMVLT----DGAA-AAADLV 395 (416)
T ss_dssp CCCSBTHHHHHHHHHHHTSEEEC------SSSCCCHHHHHHHHHHH-TSHHHHHHHHHHTTTCCC----CHHH-HHHHHH
T ss_pred ccCCCCcHHHHHHHHHCCCccCC------CCCCCCHHHHHHHHHHh-hCHHHHHHHHHHHHHHhh----cCcH-HHHHHH
Confidence 99999999999999999999999 66778999999999999 999999999999888553 3444 544444
Q ss_pred HHHHHhcc
Q 012061 462 IDKWKCNN 469 (472)
Q Consensus 462 ~~~~~~~~ 469 (472)
++.+..+.
T Consensus 396 ~e~~~~~~ 403 (416)
T 1rrv_A 396 LAAVGREK 403 (416)
T ss_dssp HHHHHC--
T ss_pred HHHHhccC
Confidence 26655433
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.2e-41 Score=334.56 Aligned_cols=364 Identities=16% Similarity=0.127 Sum_probs=240.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCCCCCCCCCCChHH
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPFDPNSANATDPFL 90 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (472)
|||+|++.++.||++|++.||++|+++||+|+|++++.+.+.++..|+ ++....+..... ....... ......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~g~-~~~~l~~~~~~~----~~~~~~~--~~~~~~ 73 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGV-PMVPVGRAVRAG----AREPGEL--PPGAAE 73 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHTTC-CEEECSSCSSGG----GSCTTCC--CTTCGG
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcCC-ceeecCCCHHHH----hccccCC--HHHHHH
Confidence 799999999999999999999999999999999999887777777776 222111111000 0000000 011111
Q ss_pred HHHHHHHHhHhhhhhhcCCCCcEEEEcCCChhhh---HHHHHhcCCCeEEEeCccHHHHHHHhhhhhhhhccCCCCCCCC
Q 012061 91 LRWEAIRRSAHLLAPLLSPPLSALITDVTLISAV---LPVTINLHLPNYVLFTASAKMFSLTASFPAIVASKSTSSGSVE 167 (472)
Q Consensus 91 ~~~~~~~~~~~~~~~ll~~~~D~vI~D~~~~~~~---~~vA~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 167 (472)
.+...+......+.+++ .+||+||+|. ....+ ..+|+++|||++.+...+....+... ....
T Consensus 74 ~~~~~~~~~~~~l~~~~-~~pD~Vi~~~-~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~--~~~~----------- 138 (404)
T 3h4t_A 74 VVTEVVAEWFDKVPAAI-EGCDAVVTTG-LLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQS--QAER----------- 138 (404)
T ss_dssp GHHHHHHHHHHHHHHHH-TTCSEEEEEE-CHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSC--HHHH-----------
T ss_pred HHHHHHHHHHHHHHHHh-cCCCEEEECC-chhhhhhhhhHHhhcCCCEEEEEcCCccCCChhH--HHHH-----------
Confidence 12222222222222222 2899999986 43334 78999999999988776542110000 0000
Q ss_pred CCCCceeCCCCCCCCCCCCCCCccCCchhHHHHHHHhccc------cc---------ccceEEEcccccccHHHHHHHhc
Q 012061 168 FDDDFIEIPGLPPIPLSSVPPAVMDSKSLFATSFLENGNS------FV---------KSNGVLINSFDALEADTLVALNG 232 (472)
Q Consensus 168 ~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---------~~~~~l~~s~~~le~~~~~~~~~ 232 (472)
.......++.+....+. +. ..+..+.+..+.+.+.
T Consensus 139 -----------------------~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~------- 188 (404)
T 3h4t_A 139 -----------------------DMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL------- 188 (404)
T ss_dssp -----------------------HHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC-------
T ss_pred -----------------------HHHHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC-------
Confidence 00000000000000000 00 0112234444444332
Q ss_pred ccccCCCCCeeEecccCCCCccCCCCCCccchhhhccCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeC
Q 012061 233 RRVVAGLPPVYAVGPLLPCEFEKRDDPSTSLILKWLDDQPEGSVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKG 312 (472)
Q Consensus 233 ~~~~p~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~ 312 (472)
.+..++++++|++..... ...+++ +.+|++. ++++|||++||... ..+.+..+++++++.+.+++|+.+.
T Consensus 189 ---~~~~~~~~~~G~~~~~~~-~~~~~~---l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~ 258 (404)
T 3h4t_A 189 ---RPTDLGTVQTGAWILPDQ-RPLSAE---LEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGW 258 (404)
T ss_dssp ---CTTCCSCCBCCCCCCCCC-CCCCHH---HHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTT
T ss_pred ---CCCCCCeEEeCccccCCC-CCCCHH---HHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 122347889998865432 223445 8889874 34699999999976 7778899999999999999998876
Q ss_pred CCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCcccchhhH
Q 012061 313 KNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFGDQKINA 392 (472)
Q Consensus 313 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na 392 (472)
..... ... .+|+++.+|+||.++|. .+++||||||+||++|++++|+|+|++|+.+||+.||
T Consensus 259 ~~~~~-------~~~---------~~~v~~~~~~~~~~ll~--~~d~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na 320 (404)
T 3h4t_A 259 AGLGR-------IDE---------GDDCLVVGEVNHQVLFG--RVAAVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYA 320 (404)
T ss_dssp TTCCC-------SSC---------CTTEEEESSCCHHHHGG--GSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHH
T ss_pred ccccc-------ccC---------CCCEEEecCCCHHHHHh--hCcEEEECCcHHHHHHHHHcCCCEEEcCCcccHHHHH
Confidence 21100 001 27899999999999994 5888999999999999999999999999999999999
Q ss_pred HHHHhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHH
Q 012061 393 EAVERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELIDKWK 466 (472)
Q Consensus 393 ~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (472)
+++++.|+|+.+ +...+++++|.++|+++++ ++|+++++++++. +.+ +++.+.++.+.+.+.
T Consensus 321 ~~~~~~G~g~~l------~~~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~----~~~-~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 321 GRVADLGVGVAH------DGPTPTVESLSAALATALT-PGIRARAAAVAGT----IRT-DGTTVAAKLLLEAIS 382 (404)
T ss_dssp HHHHHHTSEEEC------SSSSCCHHHHHHHHHHHTS-HHHHHHHHHHHTT----CCC-CHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEecc------CcCCCCHHHHHHHHHHHhC-HHHHHHHHHHHHH----Hhh-hHHHHHHHHHHHHHh
Confidence 999999999999 7778899999999999999 9999999999988 444 455555555555444
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.7e-40 Score=328.07 Aligned_cols=379 Identities=19% Similarity=0.171 Sum_probs=249.8
Q ss_pred CCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCCCCCCCC
Q 012061 5 GGFDSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPFDPNSAN 84 (472)
Q Consensus 5 ~~~~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (472)
.+..++|||+|+++++.||++|++.||++|+++||+|++++++.+.+.++..|+ + +...+.+.....
T Consensus 15 ~~~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~G~-~------------~~~~~~~~~~~~ 81 (415)
T 3rsc_A 15 IEGRHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAAGA-T------------VVPYQSEIIDAD 81 (415)
T ss_dssp ----CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTC-E------------EEECCCSTTTCC
T ss_pred cCcccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhcCC-E------------EEeccccccccc
Confidence 344557899999999999999999999999999999999998776666665554 1 111111100000
Q ss_pred ------CCCh---HHH-HHHHHHHhHhhhhhhcC-CCCcEEEEc-CCChhhhHHHHHhcCCCeEEEeCccHHHHHHHhhh
Q 012061 85 ------ATDP---FLL-RWEAIRRSAHLLAPLLS-PPLSALITD-VTLISAVLPVTINLHLPNYVLFTASAKMFSLTASF 152 (472)
Q Consensus 85 ------~~~~---~~~-~~~~~~~~~~~~~~ll~-~~~D~vI~D-~~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~ 152 (472)
.... +.. +..........+.++++ .+||+||+| . ..+++..+|+++|||++.+.+....... +...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~-~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~ 159 (415)
T 3rsc_A 82 AAEVFGSDDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDF-PFIAGQLLAARWRRPAVRLSAAFASNEH-YSFS 159 (415)
T ss_dssp HHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEEST-THHHHHHHHHHTTCCEEEEESSCCCCSS-CCHH
T ss_pred cchhhccccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECch-hhhHHHHHHHHhCCCEEEEEecccccCc-cccc
Confidence 0111 111 22222233446667777 899999999 6 7778999999999999987644221000 0000
Q ss_pred hhhhhccCCCCCCCCCCCCceeCCCCCCCCCCCCCCCccCCchhHHHHHHHhccc------cc-ccceEEEcccccccHH
Q 012061 153 PAIVASKSTSSGSVEFDDDFIEIPGLPPIPLSSVPPAVMDSKSLFATSFLENGNS------FV-KSNGVLINSFDALEAD 225 (472)
Q Consensus 153 p~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~l~~s~~~le~~ 225 (472)
+... +..+...+.........+.+........ .. ..+..+....+.++..
T Consensus 160 ~~~~-----------------------~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~ 216 (415)
T 3rsc_A 160 QDMV-----------------------TLAGTIDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA 216 (415)
T ss_dssp HHHH-----------------------HHHTCCCGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT
T ss_pred cccc-----------------------cccccCChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC
Confidence 0000 0000000000000001111111111100 00 1144455544444432
Q ss_pred HHHHHhcccccCCCCCeeEecccCCCCccCCCCCCccchhhhccCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCc
Q 012061 226 TLVALNGRRVVAGLPPVYAVGPLLPCEFEKRDDPSTSLILKWLDDQPEGSVVYVSFGSRLALSMEQTKELGDGLLSSGCR 305 (472)
Q Consensus 226 ~~~~~~~~~~~p~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~ 305 (472)
... ...++.++||+..... + ..+|....+++++|||++||......+.+..+++++++.+.+
T Consensus 217 -----~~~----~~~~~~~vGp~~~~~~------~---~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~ 278 (415)
T 3rsc_A 217 -----GDT----FDDRFVFVGPCFDDRR------F---LGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWH 278 (415)
T ss_dssp -----GGG----CCTTEEECCCCCCCCG------G---GCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCE
T ss_pred -----ccc----CCCceEEeCCCCCCcc------c---CcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcE
Confidence 000 1236899999875332 1 445665566778999999999776778899999999998889
Q ss_pred eEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCc
Q 012061 306 FLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHF 385 (472)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~ 385 (472)
++|.++.. .+.+.+. .++ +|+++.+|+|+.++|++ +++||||||+||++|++++|+|+|++|..
T Consensus 279 ~v~~~g~~----~~~~~l~-~~~---------~~v~~~~~~~~~~ll~~--ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~ 342 (415)
T 3rsc_A 279 VVMTLGGQ----VDPAALG-DLP---------PNVEAHRWVPHVKVLEQ--ATVCVTHGGMGTLMEALYWGRPLVVVPQS 342 (415)
T ss_dssp EEEECTTT----SCGGGGC-CCC---------TTEEEESCCCHHHHHHH--EEEEEESCCHHHHHHHHHTTCCEEECCCS
T ss_pred EEEEeCCC----CChHHhc-CCC---------CcEEEEecCCHHHHHhh--CCEEEECCcHHHHHHHHHhCCCEEEeCCc
Confidence 98888751 1111111 122 78999999999999966 56699999999999999999999999999
Q ss_pred ccchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHH
Q 012061 386 GDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELIDKW 465 (472)
Q Consensus 386 ~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 465 (472)
.||+.||+++++.|+|+.+ +..++++++|.++|+++|+|++++++++++++.+.+. +++.+.++.+.+.+
T Consensus 343 ~~q~~~a~~l~~~g~g~~~------~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~ 412 (415)
T 3rsc_A 343 FDVQPMARRVDQLGLGAVL------PGEKADGDTLLAAVGAVAADPALLARVEAMRGHVRRA----GGAARAADAVEAYL 412 (415)
T ss_dssp GGGHHHHHHHHHHTCEEEC------CGGGCCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHS----CHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHcCCEEEc------ccCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHh
Confidence 9999999999999999999 7778899999999999999999999999999997653 56666666555444
No 12
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=4.1e-40 Score=327.66 Aligned_cols=387 Identities=16% Similarity=0.123 Sum_probs=233.9
Q ss_pred CCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCC-CC----
Q 012061 6 GFDSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPF-DP---- 80 (472)
Q Consensus 6 ~~~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---- 80 (472)
.....|||+|+++++.||++|+++||++|+++||+|+|++++.+.+.++..|+ ++.......+.-.+..... ..
T Consensus 16 ~~~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~G~-~~~~i~~~~~~~~~~~~~~~~~~~~~ 94 (441)
T 2yjn_A 16 PRGSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAAGL-TAVPVGTDVDLVDFMTHAGHDIIDYV 94 (441)
T ss_dssp ---CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTTTC-CEEECSCCCCHHHHHHHTTHHHHHHH
T ss_pred ccCCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhCCC-ceeecCCccchHHHhhhhhccccccc
Confidence 44556999999999999999999999999999999999999876555555554 2111100000000000000 00
Q ss_pred --CCC----CCCChHHHH---HHHHHH----------hHhhhhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeC
Q 012061 81 --NSA----NATDPFLLR---WEAIRR----------SAHLLAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYVLFT 140 (472)
Q Consensus 81 --~~~----~~~~~~~~~---~~~~~~----------~~~~~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~ 140 (472)
.+. +....+..+ ...+.. ....+.++++ .+||+||+|. +.+++..+|+.+|||++.+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~-~~~~~~~aA~~lgiP~v~~~~ 173 (441)
T 2yjn_A 95 RSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEP-LTFAAPIAAAVTGTPHARLLW 173 (441)
T ss_dssp TTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECT-TCTHHHHHHHHHTCCEEEECS
T ss_pred ccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecC-cchhHHHHHHHcCCCEEEEec
Confidence 000 000011111 111211 1223334445 6999999999 667899999999999998865
Q ss_pred ccHHHHHHHhhhhhhhhccCCCCCCCCCCCCceeCCCCCCCCCCCCCCCccCCchhHHHHHHHhcc-ccc----ccceEE
Q 012061 141 ASAKMFSLTASFPAIVASKSTSSGSVEFDDDFIEIPGLPPIPLSSVPPAVMDSKSLFATSFLENGN-SFV----KSNGVL 215 (472)
Q Consensus 141 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~l 215 (472)
.+.........+.... . ..| .. .. .....+.+.+...+... ... ..+..+
T Consensus 174 ~~~~~~~~~~~~~~~~--~--------------~~~----~~--~~---~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l 228 (441)
T 2yjn_A 174 GPDITTRARQNFLGLL--P--------------DQP----EE--HR---EDPLAEWLTWTLEKYGGPAFDEEVVVGQWTI 228 (441)
T ss_dssp SCCHHHHHHHHHHHHG--G--------------GSC----TT--TC---CCHHHHHHHHHHHHTTCCCCCGGGTSCSSEE
T ss_pred CCCcchhhhhhhhhhc--c--------------ccc----cc--cc---cchHHHHHHHHHHHcCCCCCCccccCCCeEE
Confidence 5432211111011100 0 000 00 00 00011111122222111 100 122233
Q ss_pred EcccccccHHHHHHHhcccccCCCCCeeEecccCCCCccCCCCCCccchhhhccCCCCCceEEEeecccccC---CHHHH
Q 012061 216 INSFDALEADTLVALNGRRVVAGLPPVYAVGPLLPCEFEKRDDPSTSLILKWLDDQPEGSVVYVSFGSRLAL---SMEQT 292 (472)
Q Consensus 216 ~~s~~~le~~~~~~~~~~~~~p~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~---~~~~~ 292 (472)
....+.++.+ ..++. ..+++.... .+.+ +.+|++..+++++|||++||.... ..+.+
T Consensus 229 ~~~~~~~~~~-----------~~~~~-~~~~~~~~~-----~~~~---~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~ 288 (441)
T 2yjn_A 229 DPAPAAIRLD-----------TGLKT-VGMRYVDYN-----GPSV---VPEWLHDEPERRRVCLTLGISSRENSIGQVSI 288 (441)
T ss_dssp ECSCGGGSCC-----------CCCCE-EECCCCCCC-----SSCC---CCGGGSSCCSSCEEEEEC----------CCST
T ss_pred EecCccccCC-----------CCCCC-CceeeeCCC-----CCcc---cchHhhcCCCCCEEEEECCCCcccccChHHHH
Confidence 3332322211 01111 112221111 1223 778998777778999999998653 34567
Q ss_pred HHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcccCcCcEEeecCcchHHHH
Q 012061 293 KELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEA 372 (472)
Q Consensus 293 ~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~ea 372 (472)
..+++++.+.+.+++|+.+.. +.+.+. .+| +|+++.+|+||.++| +++++||||||+||++|+
T Consensus 289 ~~~~~al~~~~~~~v~~~g~~-----~~~~l~-~~~---------~~v~~~~~~~~~~ll--~~ad~~V~~~G~~t~~Ea 351 (441)
T 2yjn_A 289 EELLGAVGDVDAEIIATFDAQ-----QLEGVA-NIP---------DNVRTVGFVPMHALL--PTCAATVHHGGPGSWHTA 351 (441)
T ss_dssp TTTHHHHHTSSSEEEECCCTT-----TTSSCS-SCC---------SSEEECCSCCHHHHG--GGCSEEEECCCHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEECCc-----chhhhc-cCC---------CCEEEecCCCHHHHH--hhCCEEEECCCHHHHHHH
Confidence 788999998899999988752 111111 122 789999999999999 668889999999999999
Q ss_pred HHhCCcEEecCCcccchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCC
Q 012061 373 ARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGG 452 (472)
Q Consensus 373 l~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g 452 (472)
+++|+|+|++|+..||+.||+++++.|+|+.+ +...+++++|.++|+++|+|++++++++++++++++ .+
T Consensus 352 ~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~------~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~ 421 (441)
T 2yjn_A 352 AIHGVPQVILPDGWDTGVRAQRTQEFGAGIAL------PVPELTPDQLRESVKRVLDDPAHRAGAARMRDDMLA----EP 421 (441)
T ss_dssp HHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC------CTTTCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SC
T ss_pred HHhCCCEEEeCCcccHHHHHHHHHHcCCEEEc------ccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHc----CC
Confidence 99999999999999999999999999999999 777889999999999999999999999999998664 35
Q ss_pred ChHHHHHHHHHHHH
Q 012061 453 SSERTFKELIDKWK 466 (472)
Q Consensus 453 ~~~~~~~~~~~~~~ 466 (472)
+..+.++.+.+.+.
T Consensus 422 ~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 422 SPAEVVGICEELAA 435 (441)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 56665555544443
No 13
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=4.3e-39 Score=316.67 Aligned_cols=378 Identities=18% Similarity=0.194 Sum_probs=245.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCCCC-CCCCCCCh
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPFDP-NSANATDP 88 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 88 (472)
++||+|+++++.||++|++.||++|+++||+|++++++.+.+.++..|+ ++..... ....... ........
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~-~~~~~~~-------~~~~~~~~~~~~~~~~ 75 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAGA-EVVLYKS-------EFDTFHVPEVVKQEDA 75 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHTTC-EEEECCC-------GGGTSSSSSSSCCTTH
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHcCC-EEEeccc-------ccccccccccccccch
Confidence 3599999999999999999999999999999999998766555555554 1111000 0000000 00111222
Q ss_pred HHHH----HHHHHHhHhhhhhhcC-CCCcEEEEc-CCChhhhHHHHHhcCCCeEEEeCccHHHHHHHhhhh--hhhhccC
Q 012061 89 FLLR----WEAIRRSAHLLAPLLS-PPLSALITD-VTLISAVLPVTINLHLPNYVLFTASAKMFSLTASFP--AIVASKS 160 (472)
Q Consensus 89 ~~~~----~~~~~~~~~~~~~ll~-~~~D~vI~D-~~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~p--~~~~~~~ 160 (472)
...+ ..........+.++++ .+||+||+| . +.+++..+|+++|||++.+.+...... .+.+ ...
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~-~~~~~~~aA~~~giP~v~~~~~~~~~~---~~~~~~~~~---- 147 (402)
T 3ia7_A 76 ETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVF-PFIAGRLLAARWDRPAVRLTGGFAANE---HYSLFKELW---- 147 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEST-THHHHHHHHHHHTCCEEEEESSCCCBT---TBCHHHHHH----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECch-HHHHHHHHHHhhCCCEEEEecccccCc---ccccccccc----
Confidence 2222 1222223446667777 899999999 6 777899999999999988764422100 0000 000
Q ss_pred CCCCCCCCCCCceeCCCCCCCCCCCCCCCccCCchhHHHHHHHhccc------cc-ccceEEEcccccccHHHHHHHhcc
Q 012061 161 TSSGSVEFDDDFIEIPGLPPIPLSSVPPAVMDSKSLFATSFLENGNS------FV-KSNGVLINSFDALEADTLVALNGR 233 (472)
Q Consensus 161 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~l~~s~~~le~~~~~~~~~~ 233 (472)
+......+.........+.+........ .. ..+..+.....+++.. ...
T Consensus 148 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~ 203 (402)
T 3ia7_A 148 -------------------KSNGQRHPADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF-----AET 203 (402)
T ss_dssp -------------------HHHTCCCGGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-----GGG
T ss_pred -------------------ccccccChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-----ccc
Confidence 0000000000000000111111111000 00 1133444444444332 000
Q ss_pred cccCCCCCeeEecccCCCCccCCCCCCccchhhhccCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCC
Q 012061 234 RVVAGLPPVYAVGPLLPCEFEKRDDPSTSLILKWLDDQPEGSVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGK 313 (472)
Q Consensus 234 ~~~p~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~ 313 (472)
...++.++||+..... + ..+|+...+++++|||++||......+.+..+++++.+.+.+++|.++..
T Consensus 204 ----~~~~~~~vGp~~~~~~------~---~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 270 (402)
T 3ia7_A 204 ----FDERFAFVGPTLTGRD------G---QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGF 270 (402)
T ss_dssp ----CCTTEEECCCCCCC-------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTT
T ss_pred ----CCCCeEEeCCCCCCcc------c---CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCc
Confidence 1236899999865332 1 34466556677899999999977778889999999998888888888751
Q ss_pred CCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcccCcCcEEeecCcchHHHHHHhCCcEEecCC-cccchhhH
Q 012061 314 NVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPH-FGDQKINA 392 (472)
Q Consensus 314 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~-~~DQ~~na 392 (472)
.+.+.+.. ++ +|+++.+|+|+.++|++ +++||||||+||++|++++|+|+|++|. ..||..||
T Consensus 271 ----~~~~~~~~-~~---------~~v~~~~~~~~~~ll~~--ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a 334 (402)
T 3ia7_A 271 ----LDPAVLGP-LP---------PNVEAHQWIPFHSVLAH--ARACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSA 334 (402)
T ss_dssp ----SCGGGGCS-CC---------TTEEEESCCCHHHHHTT--EEEEEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHH
T ss_pred ----CChhhhCC-CC---------CcEEEecCCCHHHHHhh--CCEEEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHH
Confidence 11111111 22 78999999999999966 6679999999999999999999999999 99999999
Q ss_pred HHHHhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHH
Q 012061 393 EAVERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELIDKWK 466 (472)
Q Consensus 393 ~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (472)
+++++.|+|+.+ +.+.++++.|.++|+++|+|++++++++++++++.+ ++++.+.++.+.+.+.
T Consensus 335 ~~~~~~g~g~~~------~~~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 335 ERVIELGLGSVL------RPDQLEPASIREAVERLAADSAVRERVRRMQRDILS----SGGPARAADEVEAYLG 398 (402)
T ss_dssp HHHHHTTSEEEC------CGGGCSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEc------cCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh----CChHHHHHHHHHHHHh
Confidence 999999999999 777789999999999999999999999999988654 4566666665555443
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=2.4e-38 Score=309.46 Aligned_cols=366 Identities=12% Similarity=0.086 Sum_probs=238.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccchhhhhhhhhhcCCCc-cceEEeec-CCCCCCCCCC-C
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSAYPQV-TAKRFHLL-PFDPNSANAT-D 87 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~-~ 87 (472)
|||++++.++.||++|+++||++|+++||+|++++++...+.++..|+ ++....... ... .... ...+...... .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 78 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGVGL-PAVATTDLPIRHF-ITTDREGRPEAIPSDPV 78 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTC-CEEESCSSCHHHH-HHBCTTSCBCCCCCSHH
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhCCC-EEEEeCCcchHHH-HhhhcccCccccCcchH
Confidence 799999999999999999999999999999999998765444444443 111100000 000 0000 0000001000 1
Q ss_pred hHHHH-HH----HHHHhHhhhhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeCccHHHHHHHhhhhhhhhccCC
Q 012061 88 PFLLR-WE----AIRRSAHLLAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYVLFTASAKMFSLTASFPAIVASKST 161 (472)
Q Consensus 88 ~~~~~-~~----~~~~~~~~~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 161 (472)
....+ .. ........+.++++ .+||+||+|. +.+++..+|+.+|||++.+...+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~-~~~~~~~~a~~~giP~v~~~~~~~~----------------- 140 (384)
T 2p6p_A 79 AQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGT-MSYVAPLLALHLGVPHARQTWDAVD----------------- 140 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEET-TCTHHHHHHHHHTCCEEEECCSSCC-----------------
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECc-chhhHHHHHHhcCCCEEEeccCCcc-----------------
Confidence 11111 11 11112334555556 6999999998 6678889999999999877432100
Q ss_pred CCCCCCCCCCceeCCCCCCCCCCCCCCCccCCchhHHHHHHHh-cccccccceEEEcccccccHHHHHHHhcccccCCCC
Q 012061 162 SSGSVEFDDDFIEIPGLPPIPLSSVPPAVMDSKSLFATSFLEN-GNSFVKSNGVLINSFDALEADTLVALNGRRVVAGLP 240 (472)
Q Consensus 162 ~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~p~~p 240 (472)
+ ... .........+...+. ......++.+++++.+.++... .. +. +
T Consensus 141 --------------~-------~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~-----~~---~~-~ 187 (384)
T 2p6p_A 141 --------------A-------DGI---HPGADAELRPELSELGLERLPAPDLFIDICPPSLRPAN-----AA---PA-R 187 (384)
T ss_dssp --------------C-------TTT---HHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT-----SC---CC-E
T ss_pred --------------c-------chh---hHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC-----CC---CC-C
Confidence 0 000 000000011111111 1111125677888877776430 00 10 1
Q ss_pred CeeEecccCCCCccCCCCCCccchhhhccCCCCCceEEEeecccccC-----CHHHHHHHHHHHHhCCCceEEEEeCCCC
Q 012061 241 PVYAVGPLLPCEFEKRDDPSTSLILKWLDDQPEGSVVYVSFGSRLAL-----SMEQTKELGDGLLSSGCRFLWVVKGKNV 315 (472)
Q Consensus 241 ~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~-----~~~~~~~~~~al~~~~~~~~~~~~~~~~ 315 (472)
++.+++. .. +.+ +.+|++..+++++|||++||.... +.+.+..++++|.+.+.+++|+.+.
T Consensus 188 ~~~~~~~---~~-----~~~---~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~--- 253 (384)
T 2p6p_A 188 MMRHVAT---SR-----QCP---LEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPD--- 253 (384)
T ss_dssp ECCCCCC---CC-----CCB---CCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCH---
T ss_pred ceEecCC---CC-----CCC---CCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCC---
Confidence 2333321 10 123 778988766677999999999654 4567888999999889999998764
Q ss_pred CcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCcccchhhHHHH
Q 012061 316 DKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFGDQKINAEAV 395 (472)
Q Consensus 316 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v 395 (472)
.+.+.+.. + ++|+.+ +|+||.++| +.+++||||||+||++||+++|+|+|++|...||+.||+++
T Consensus 254 --~~~~~l~~-~---------~~~v~~-~~~~~~~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~ 318 (384)
T 2p6p_A 254 --TVAEALRA-E---------VPQARV-GWTPLDVVA--PTCDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRV 318 (384)
T ss_dssp --HHHHHHHH-H---------CTTSEE-ECCCHHHHG--GGCSEEEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHH
T ss_pred --CCHHhhCC-C---------CCceEE-cCCCHHHHH--hhCCEEEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHH
Confidence 12111111 1 278999 999999999 55788999999999999999999999999999999999999
Q ss_pred HhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHhcc
Q 012061 396 ERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELIDKWKCNN 469 (472)
Q Consensus 396 ~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 469 (472)
++.|+|+.+ +...+++++|.++|+++|+|+++++++++++++++.. ++.++.++ .++.+....
T Consensus 319 ~~~g~g~~~------~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~i~~~~~~~ 381 (384)
T 2p6p_A 319 ADYGAAIAL------LPGEDSTEAIADSCQELQAKDTYARRAQDLSREISGM----PLPATVVT-ALEQLAHHH 381 (384)
T ss_dssp HHHTSEEEC------CTTCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTS----CCHHHHHH-HHHHHHHHH
T ss_pred HHCCCeEec------CcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhC----CCHHHHHH-HHHHHhhhc
Confidence 999999999 6667899999999999999999999999999997754 45555554 445444433
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=5.7e-38 Score=311.48 Aligned_cols=371 Identities=18% Similarity=0.153 Sum_probs=242.0
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCCC-CCCCC---
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPFD-PNSAN--- 84 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--- 84 (472)
++|||++++.++.||++|++.|+++|+++||+|+++++....+.++..|+ .+...+.. +....
T Consensus 6 ~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~ 72 (430)
T 2iyf_A 6 TPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATGP-------------RPVLYHSTLPGPDADPE 72 (430)
T ss_dssp --CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTTSC-------------EEEECCCCSCCTTSCGG
T ss_pred ccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCC-------------EEEEcCCcCcccccccc
Confidence 45799999999999999999999999999999999998765444433333 11111111 00000
Q ss_pred --CCChHHHH---HHHHHHhHhhhhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeCccHHHHHHHhhh--hhhh
Q 012061 85 --ATDPFLLR---WEAIRRSAHLLAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYVLFTASAKMFSLTASF--PAIV 156 (472)
Q Consensus 85 --~~~~~~~~---~~~~~~~~~~~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~--p~~~ 156 (472)
..+....+ ..........+.++++ .+||+||+|. +.+++..+|+++|||++.+++.+.........+ +...
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~-~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~ 151 (430)
T 2iyf_A 73 AWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDI-TSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWR 151 (430)
T ss_dssp GGCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEET-TCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECC-ccHHHHHHHHHcCCCEEEEecccccccccccccccchhh
Confidence 01111111 1112233446677777 8999999998 666899999999999998876542100000000 0000
Q ss_pred hccCCCCCCCCCCCCceeCCCCCCCCCCCCCCCccCCchhHHHHHHHhcc------cccccceEEEcccccccHHHHHHH
Q 012061 157 ASKSTSSGSVEFDDDFIEIPGLPPIPLSSVPPAVMDSKSLFATSFLENGN------SFVKSNGVLINSFDALEADTLVAL 230 (472)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~s~~~le~~~~~~~ 230 (472)
. . ...++. ........+.+.+... ....++.+++++.+.++...
T Consensus 152 --~--------~----~~~~~~------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 201 (430)
T 2iyf_A 152 --E--------P----RQTERG------------RAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA---- 201 (430)
T ss_dssp --H--------H----HHSHHH------------HHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG----
T ss_pred --h--------h----ccchHH------------HHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc----
Confidence 0 0 000000 0000001111111000 01135678888888776531
Q ss_pred hcccccCCCCC-eeEecccCCCCccCCCCCCccchhhhccCCCCCceEEEeecccccCCHHHHHHHHHHHHhC-CCceEE
Q 012061 231 NGRRVVAGLPP-VYAVGPLLPCEFEKRDDPSTSLILKWLDDQPEGSVVYVSFGSRLALSMEQTKELGDGLLSS-GCRFLW 308 (472)
Q Consensus 231 ~~~~~~p~~p~-v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~~~ 308 (472)
.. ..++ ++++||...... + ..+|.+..+++++||+++||......+.+..+++++++. +.+++|
T Consensus 202 ~~-----~~~~~v~~vG~~~~~~~------~---~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~ 267 (430)
T 2iyf_A 202 DR-----VDEDVYTFVGACQGDRA------E---EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVL 267 (430)
T ss_dssp GG-----SCTTTEEECCCCC--------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEE
T ss_pred cc-----CCCccEEEeCCcCCCCC------C---CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEE
Confidence 11 1246 999998654221 1 234655556677999999999855578888999999885 788888
Q ss_pred EEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCcccc
Q 012061 309 VVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFGDQ 388 (472)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ 388 (472)
+++.. ...+.+. .+ .+|+.+.+|+||.++|++ +++||||||+||++||+++|+|+|++|..+||
T Consensus 268 ~~G~~----~~~~~l~-~~---------~~~v~~~~~~~~~~~l~~--ad~~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q 331 (430)
T 2iyf_A 268 QIGRK----VTPAELG-EL---------PDNVEVHDWVPQLAILRQ--ADLFVTHAGAGGSQEGLATATPMIAVPQAVDQ 331 (430)
T ss_dssp ECC-------CGGGGC-SC---------CTTEEEESSCCHHHHHTT--CSEEEECCCHHHHHHHHHTTCCEEECCCSHHH
T ss_pred EeCCC----CChHHhc-cC---------CCCeEEEecCCHHHHhhc--cCEEEECCCccHHHHHHHhCCCEEECCCccch
Confidence 88751 1111111 12 278999999999999966 55699999999999999999999999999999
Q ss_pred hhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHH
Q 012061 389 KINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELID 463 (472)
Q Consensus 389 ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 463 (472)
..||+++++.|+|+.+ +...+++++|.++|+++++|+++++++.++++++.+. ++..+.++.+.+
T Consensus 332 ~~~a~~~~~~g~g~~~------~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ 396 (430)
T 2iyf_A 332 FGNADMLQGLGVARKL------ATEEATADLLRETALALVDDPEVARRLRRIQAEMAQE----GGTRRAADLIEA 396 (430)
T ss_dssp HHHHHHHHHTTSEEEC------CCC-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH----CHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCEEEc------CCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc----CcHHHHHHHHHH
Confidence 9999999999999999 6677899999999999999999999999999987764 455555555443
No 16
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=5.7e-36 Score=293.95 Aligned_cols=350 Identities=17% Similarity=0.189 Sum_probs=225.7
Q ss_pred CCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCCCC----
Q 012061 5 GGFDSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPFDP---- 80 (472)
Q Consensus 5 ~~~~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 80 (472)
....+.|||+|++.++.||++|++.||++|+++||+|+++++ .+.+.++..|+ . +...+.+.
T Consensus 15 ~~~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~G~-~------------~~~~~~~~~~~~ 80 (398)
T 3oti_A 15 HIEGRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAAGL-E------------VVDVAPDYSAVK 80 (398)
T ss_dssp ----CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTTTC-E------------EEESSTTCCHHH
T ss_pred chhhhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhCCC-e------------eEecCCccCHHH
Confidence 344556999999999999999999999999999999999998 66666666554 1 11111100
Q ss_pred ------------------CCCCCCChHHHH-HHHHHHhHhhhhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeC
Q 012061 81 ------------------NSANATDPFLLR-WEAIRRSAHLLAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYVLFT 140 (472)
Q Consensus 81 ------------------~~~~~~~~~~~~-~~~~~~~~~~~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~ 140 (472)
........+... ..........+.++++ .+||+||+|. ..+++..+|+.+|||++....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~-~~~~~~~aA~~~giP~v~~~~ 159 (398)
T 3oti_A 81 VFEQVAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQ-GATVGLLAADRAGVPAVQRNQ 159 (398)
T ss_dssp HHHHHHHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEET-TCHHHHHHHHHHTCCEEEECC
T ss_pred HhhhcccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECc-hhhHHHHHHHHcCCCEEEEec
Confidence 000011111111 1222223345666666 7999999998 777889999999999987643
Q ss_pred ccHHHHHHHhhhhhhhhccCCCCCCCCCCCCceeCCCCCCCCCCCCCCCccCCchhHHHHHHHhcccccccceEEEcccc
Q 012061 141 ASAKMFSLTASFPAIVASKSTSSGSVEFDDDFIEIPGLPPIPLSSVPPAVMDSKSLFATSFLENGNSFVKSNGVLINSFD 220 (472)
Q Consensus 141 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~ 220 (472)
...... . . ...... .+.....+...........+.....
T Consensus 160 ~~~~~~-----------------------~----------~-----~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~ 198 (398)
T 3oti_A 160 SAWRTR-----------------------G----------M-----HRSIAS---FLTDLMDKHQVSLPEPVATIESFPP 198 (398)
T ss_dssp TTCCCT-----------------------T----------H-----HHHHHT---TCHHHHHHTTCCCCCCSEEECSSCG
T ss_pred cCCCcc-----------------------c----------h-----hhHHHH---HHHHHHHHcCCCCCCCCeEEEeCCH
Confidence 311000 0 0 000000 0011111111111122223322222
Q ss_pred cccHHHHHHHhcccccCCCCCeeEecccCCCCccCCCCCCccchhhhccCCCCCceEEEeecccccC--CHHHHHHHHHH
Q 012061 221 ALEADTLVALNGRRVVAGLPPVYAVGPLLPCEFEKRDDPSTSLILKWLDDQPEGSVVYVSFGSRLAL--SMEQTKELGDG 298 (472)
Q Consensus 221 ~le~~~~~~~~~~~~~p~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~--~~~~~~~~~~a 298 (472)
.+... ... ... ++.++ |. . .+.. ..+|+...+++++|||++||.... ..+.+..++++
T Consensus 199 ~~~~~-----~~~---~~~-~~~~~-~~---~----~~~~---~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~ 258 (398)
T 3oti_A 199 SLLLE-----AEP---EGW-FMRWV-PY---G----GGAV---LGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAA 258 (398)
T ss_dssp GGGTT-----SCC---CSB-CCCCC-CC---C----CCEE---CCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHH
T ss_pred HHCCC-----CCC---CCC-Ccccc-CC---C----CCcC---CchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHH
Confidence 22211 000 000 11111 00 0 0112 556777667788999999998442 56678889999
Q ss_pred HHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcccCcCcEEeecCcchHHHHHHhCCc
Q 012061 299 LLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVP 378 (472)
Q Consensus 299 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP 378 (472)
|++.+.+++|+.+.. +.+.+. .++ +|+.+.+|+|+.++|++ +++||||||.||++||+++|+|
T Consensus 259 l~~~~~~~v~~~g~~-----~~~~l~-~~~---------~~v~~~~~~~~~~ll~~--ad~~v~~~G~~t~~Eal~~G~P 321 (398)
T 3oti_A 259 AGEVDADFVLALGDL-----DISPLG-TLP---------RNVRAVGWTPLHTLLRT--CTAVVHHGGGGTVMTAIDAGIP 321 (398)
T ss_dssp HHTSSSEEEEECTTS-----CCGGGC-SCC---------TTEEEESSCCHHHHHTT--CSEEEECCCHHHHHHHHHHTCC
T ss_pred HHcCCCEEEEEECCc-----Chhhhc-cCC---------CcEEEEccCCHHHHHhh--CCEEEECCCHHHHHHHHHhCCC
Confidence 998899999988762 111111 122 78999999999999965 7779999999999999999999
Q ss_pred EEecCCcccchhhH--HHHHhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHH
Q 012061 379 LLVWPHFGDQKINA--EAVERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSER 456 (472)
Q Consensus 379 ~l~~P~~~DQ~~na--~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~ 456 (472)
+|++|+..||..|| .++++.|+|+.+ +....+++.|. ++|+|++++++++++++++.+. .+..+
T Consensus 322 ~v~~p~~~dq~~~a~~~~~~~~g~g~~~------~~~~~~~~~l~----~ll~~~~~~~~~~~~~~~~~~~----~~~~~ 387 (398)
T 3oti_A 322 QLLAPDPRDQFQHTAREAVSRRGIGLVS------TSDKVDADLLR----RLIGDESLRTAAREVREEMVAL----PTPAE 387 (398)
T ss_dssp EEECCCTTCCSSCTTHHHHHHHTSEEEC------CGGGCCHHHHH----HHHHCHHHHHHHHHHHHHHHTS----CCHHH
T ss_pred EEEcCCCchhHHHHHHHHHHHCCCEEee------CCCCCCHHHHH----HHHcCHHHHHHHHHHHHHHHhC----CCHHH
Confidence 99999999999999 999999999999 66777887777 8889999999999999997653 55555
Q ss_pred HHHHH
Q 012061 457 TFKEL 461 (472)
Q Consensus 457 ~~~~~ 461 (472)
.++.+
T Consensus 388 ~~~~l 392 (398)
T 3oti_A 388 TVRRI 392 (398)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=1.3e-36 Score=298.55 Aligned_cols=369 Identities=15% Similarity=0.130 Sum_probs=217.6
Q ss_pred CCCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccchhhhhhhhhhcCC--CccceEEeecCCCCC
Q 012061 4 SGGFDSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSAYP--QVTAKRFHLLPFDPN 81 (472)
Q Consensus 4 ~~~~~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 81 (472)
.++...+|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.++..|+ .+....+ ....+..........
T Consensus 9 ~~~~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 4fzr_A 9 GVPRGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGAGL-PFAPTCPSLDMPEVLSWDREGNRT 87 (398)
T ss_dssp ------CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHTTC-CEEEEESSCCHHHHHSBCTTSCBC
T ss_pred CCCCCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhCCC-eeEecCCccchHhhhhhhccCccc
Confidence 3455667999999999999999999999999999999999998766666666654 1111000 000000000000000
Q ss_pred CCCCC--ChHHHHHHH----HHHhHhhhhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeCccHHHHHHHhhhhh
Q 012061 82 SANAT--DPFLLRWEA----IRRSAHLLAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYVLFTASAKMFSLTASFPA 154 (472)
Q Consensus 82 ~~~~~--~~~~~~~~~----~~~~~~~~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~p~ 154 (472)
..+.. ......... .......+.++++ .+||+|++|. ..+++..+|+.+|||++.+..............
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~-~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~~~-- 164 (398)
T 4fzr_A 88 TMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTET-YSLTGPLVAATLGIPWIEQSIRLASPELIKSAG-- 164 (398)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEET-TCTHHHHHHHHHTCCEEEECCSSCCCHHHHHHH--
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECc-cccHHHHHHHhhCCCEEEeccCCCCchhhhHHH--
Confidence 01000 001111111 1122234556666 7999999998 777899999999999987654421100000000
Q ss_pred hhhccCCCCCCCCCCCCceeCCCCCCCCCCCCCCCccCCchhHHHHHHHhc-ccccccceEEEcccccccHHHHHHHhcc
Q 012061 155 IVASKSTSSGSVEFDDDFIEIPGLPPIPLSSVPPAVMDSKSLFATSFLENG-NSFVKSNGVLINSFDALEADTLVALNGR 233 (472)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~s~~~le~~~~~~~~~~ 233 (472)
...+.+...+.. ......+..+......+.... .
T Consensus 165 ---------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~- 199 (398)
T 4fzr_A 165 ---------------------------------------VGELAPELAELGLTDFPDPLLSIDVCPPSMEAQP-----K- 199 (398)
T ss_dssp ---------------------------------------HHHTHHHHHTTTCSSCCCCSEEEECSCGGGC----------
T ss_pred ---------------------------------------HHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCC-----C-
Confidence 000000000000 001112233333333333220 0
Q ss_pred cccCCCCCeeEecccCCCCccCCCCCCccchhhhccCCCCCceEEEeecccccC--------CHHHHHHHHHHHHhCCCc
Q 012061 234 RVVAGLPPVYAVGPLLPCEFEKRDDPSTSLILKWLDDQPEGSVVYVSFGSRLAL--------SMEQTKELGDGLLSSGCR 305 (472)
Q Consensus 234 ~~~p~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~--------~~~~~~~~~~al~~~~~~ 305 (472)
+...++.++++.. ...+ +.+|+...+++++|||++||.... ..+.+..+++++.+.+.+
T Consensus 200 ---~~~~~~~~~~~~~-------~~~~---~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~ 266 (398)
T 4fzr_A 200 ---PGTTKMRYVPYNG-------RNDQ---VPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFE 266 (398)
T ss_dssp ---CCCEECCCCCCCC-------SSCC---CCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCE
T ss_pred ---CCCCCeeeeCCCC-------CCCC---CchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCE
Confidence 0000112222110 1123 667877766778999999998533 234578899999988999
Q ss_pred eEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCc
Q 012061 306 FLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHF 385 (472)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~ 385 (472)
++|+.+.. ..+.+.. + .+|+++.+|+|+.++|.+ +++||||||.||++||+++|+|+|++|..
T Consensus 267 ~v~~~~~~-----~~~~l~~-~---------~~~v~~~~~~~~~~ll~~--ad~~v~~gG~~t~~Ea~~~G~P~v~~p~~ 329 (398)
T 4fzr_A 267 VVVAVSDK-----LAQTLQP-L---------PEGVLAAGQFPLSAIMPA--CDVVVHHGGHGTTLTCLSEGVPQVSVPVI 329 (398)
T ss_dssp EEECCCC--------------C---------CTTEEEESCCCHHHHGGG--CSEEEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred EEEEeCCc-----chhhhcc-C---------CCcEEEeCcCCHHHHHhh--CCEEEecCCHHHHHHHHHhCCCEEecCCc
Confidence 98887661 1111111 2 278999999999999966 67799999999999999999999999999
Q ss_pred ccchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHH
Q 012061 386 GDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKEL 461 (472)
Q Consensus 386 ~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 461 (472)
.||+.||.++++.|+|+.+ +...++++.|.++|+++|+|+++++++++.++++.+ ..+..+.++.+
T Consensus 330 ~~q~~~a~~~~~~g~g~~~------~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l 395 (398)
T 4fzr_A 330 AEVWDSARLLHAAGAGVEV------PWEQAGVESVLAACARIRDDSSYVGNARRLAAEMAT----LPTPADIVRLI 395 (398)
T ss_dssp GGGHHHHHHHHHTTSEEEC------C-------CHHHHHHHHHHCTHHHHHHHHHHHHHTT----SCCHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCEEec------CcccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHc----CCCHHHHHHHH
Confidence 9999999999999999999 777789999999999999999999999999988554 45555554443
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=2e-34 Score=282.29 Aligned_cols=360 Identities=17% Similarity=0.129 Sum_probs=227.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccchhhhhhhhhhc-CCCccc--eEEeecCCCCC--CCC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSA-YPQVTA--KRFHLLPFDPN--SAN 84 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~--~~~ 84 (472)
+|||+|++.++.||++|++.|+++|+++||+|+++++....+.++..|+ .+... .+.... ......+.... ...
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGAGL-TTAGIRGNDRTGDTGGTTQLRFPNPAFGQR 79 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHBTC-EEEEC--------------CCSCCGGGGCT
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhCCC-ceeeecCCccchhhhhhhcccccccccccc
Confidence 4899999999999999999999999999999999998655555555554 11111 110000 00000000000 000
Q ss_pred CCChHHHHHHH-HHHh-------HhhhhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeCccHHHHHHHhhhhhh
Q 012061 85 ATDPFLLRWEA-IRRS-------AHLLAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYVLFTASAKMFSLTASFPAI 155 (472)
Q Consensus 85 ~~~~~~~~~~~-~~~~-------~~~~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~p~~ 155 (472)
........+.. .... ...+.++++ .+||+||+|. +.+++..+|+.+|||++.+........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~-~~~~~~~aa~~~giP~v~~~~~~~~~~--------- 149 (391)
T 3tsa_A 80 DTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDV-CALIGRVLGGLLDLPVVLHRWGVDPTA--------- 149 (391)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEET-TCHHHHHHHHHTTCCEEEECCSCCCTT---------
T ss_pred cchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCc-chhHHHHHHHHhCCCEEEEecCCcccc---------
Confidence 00111111111 1111 334556666 7999999998 777888999999999887753321000
Q ss_pred hhccCCCCCCCCCCCCceeCCCCCCCCCCCCCCCccCCchhHHHHHHHhccc-----ccccceEEEcccccccHHHHHHH
Q 012061 156 VASKSTSSGSVEFDDDFIEIPGLPPIPLSSVPPAVMDSKSLFATSFLENGNS-----FVKSNGVLINSFDALEADTLVAL 230 (472)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~s~~~le~~~~~~~ 230 (472)
.. ......+++...... ....+.++....++++..
T Consensus 150 --------------------------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 189 (391)
T 3tsa_A 150 --------------------------------GP---FSDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS----- 189 (391)
T ss_dssp --------------------------------TH---HHHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT-----
T ss_pred --------------------------------cc---ccchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC-----
Confidence 00 000111111111111 111133333333333221
Q ss_pred hcccccCCCCCeeEecccCCCCccCCCCCCccchhhhccCCCCCceEEEeeccccc---CCHHHHHHHHHHHHhC-CCce
Q 012061 231 NGRRVVAGLPPVYAVGPLLPCEFEKRDDPSTSLILKWLDDQPEGSVVYVSFGSRLA---LSMEQTKELGDGLLSS-GCRF 306 (472)
Q Consensus 231 ~~~~~~p~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~---~~~~~~~~~~~al~~~-~~~~ 306 (472)
... ...++.++ |.. .+.. ..+|+...+++++||+++||... ...+.+..++++ ++. +.++
T Consensus 190 ~~~----~~~~~~~~-p~~-------~~~~---~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~ 253 (391)
T 3tsa_A 190 DAP----QGAPVQYV-PYN-------GSGA---FPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEA 253 (391)
T ss_dssp TSC----CCEECCCC-CCC-------CCEE---CCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEE
T ss_pred CCC----ccCCeeee-cCC-------CCcC---CCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEE
Confidence 000 00012222 110 0112 55677766777899999999843 237778888888 777 7788
Q ss_pred EEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCcc
Q 012061 307 LWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFG 386 (472)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~ 386 (472)
+|+.+. .+.+.+. .+ .+|+++.+|+|+.++| +++++||||||.||++||+++|+|+|++|...
T Consensus 254 v~~~~~-----~~~~~l~-~~---------~~~v~~~~~~~~~~ll--~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~ 316 (391)
T 3tsa_A 254 VIAVPP-----EHRALLT-DL---------PDNARIAESVPLNLFL--RTCELVICAGGSGTAFTATRLGIPQLVLPQYF 316 (391)
T ss_dssp EEECCG-----GGGGGCT-TC---------CTTEEECCSCCGGGTG--GGCSEEEECCCHHHHHHHHHTTCCEEECCCST
T ss_pred EEEECC-----cchhhcc-cC---------CCCEEEeccCCHHHHH--hhCCEEEeCCCHHHHHHHHHhCCCEEecCCcc
Confidence 887765 1211111 11 2789999999999999 66788999999999999999999999999999
Q ss_pred cchhhHHHHHhhCeeeEEeecCCCCc--CCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHH
Q 012061 387 DQKINAEAVERAGLGMWVRSWGWGTE--LRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELID 463 (472)
Q Consensus 387 DQ~~na~~v~~~G~G~~l~~~~~~~~--~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 463 (472)
||+.|+.++++.|+|+.+ +. ...+++.|.++|.++|+|++++++++++++.+.. ..++.+.++.+.+
T Consensus 317 ~q~~~a~~~~~~g~g~~~------~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 385 (391)
T 3tsa_A 317 DQFDYARNLAAAGAGICL------PDEQAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITA----MPHPAALVRTLEN 385 (391)
T ss_dssp THHHHHHHHHHTTSEEEC------CSHHHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHT----SCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCEEec------CcccccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHc----CCCHHHHHHHHHH
Confidence 999999999999999999 66 6689999999999999999999999998888654 4566555554443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=6.2e-33 Score=273.65 Aligned_cols=364 Identities=18% Similarity=0.167 Sum_probs=234.2
Q ss_pred CCCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCC-----
Q 012061 4 SGGFDSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPF----- 78 (472)
Q Consensus 4 ~~~~~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 78 (472)
..+...+|||++++.++.||++|++.|+++|+++||+|+++++....+.++..|+ .+...+.
T Consensus 14 ~~~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~ 80 (412)
T 3otg_A 14 GHIEGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKLGF-------------EPVATGMPVFDG 80 (412)
T ss_dssp ----CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTC-------------EEEECCCCHHHH
T ss_pred CCcccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhcCC-------------ceeecCcccccc
Confidence 4456678999999999999999999999999999999999998754333333343 1111110
Q ss_pred ---------CCCCCCC------C-ChHHHHHHH-HHHhHhhhhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeC
Q 012061 79 ---------DPNSANA------T-DPFLLRWEA-IRRSAHLLAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYVLFT 140 (472)
Q Consensus 79 ---------~~~~~~~------~-~~~~~~~~~-~~~~~~~~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~ 140 (472)
.....+. . .....+... .......+.++++ .+||+||+|. ..+++..+|+.+|||++....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~-~~~~~~~aa~~~giP~v~~~~ 159 (412)
T 3otg_A 81 FLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEI-SNYGAGLAALKAGIPTICHGV 159 (412)
T ss_dssp HHHHHHHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEET-TCHHHHHHHHHHTCCEEEECC
T ss_pred hhhhhhhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECc-hhhHHHHHHHHcCCCEEEecc
Confidence 0000000 0 111111111 1112245566666 7999999998 666788899999999887643
Q ss_pred ccHHHHHHHhhhhhhhhccCCCCCCCCCCCCceeCCCCCCCCCCCCCCCccCCchhHHHHHHHhccc------ccccceE
Q 012061 141 ASAKMFSLTASFPAIVASKSTSSGSVEFDDDFIEIPGLPPIPLSSVPPAVMDSKSLFATSFLENGNS------FVKSNGV 214 (472)
Q Consensus 141 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 214 (472)
........ .......+.+...+.... ...++.+
T Consensus 160 ~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~ 198 (412)
T 3otg_A 160 GRDTPDDL-----------------------------------------TRSIEEEVRGLAQRLGLDLPPGRIDGFGNPF 198 (412)
T ss_dssp SCCCCSHH-----------------------------------------HHHHHHHHHHHHHHTTCCCCSSCCGGGGCCE
T ss_pred cccCchhh-----------------------------------------hHHHHHHHHHHHHHcCCCCCcccccCCCCeE
Confidence 32100000 000000001111111000 1234445
Q ss_pred EEcccccccHHHHHHHhcccccCCCCCeeEecccCCCCccCCCCCCccchhhh-ccCCCCCceEEEeecccccCCHHHHH
Q 012061 215 LINSFDALEADTLVALNGRRVVAGLPPVYAVGPLLPCEFEKRDDPSTSLILKW-LDDQPEGSVVYVSFGSRLALSMEQTK 293 (472)
Q Consensus 215 l~~s~~~le~~~~~~~~~~~~~p~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~-l~~~~~~~~v~vs~GS~~~~~~~~~~ 293 (472)
+..+...++..... .. ....++.++++- ...+ ..+| ....+++++||+++||......+.+.
T Consensus 199 i~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~--------~~~~---~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~ 261 (412)
T 3otg_A 199 IDIFPPSLQEPEFR-AR-----PRRHELRPVPFA--------EQGD---LPAWLSSRDTARPLVYLTLGTSSGGTVEVLR 261 (412)
T ss_dssp EECSCGGGSCHHHH-TC-----TTEEECCCCCCC--------CCCC---CCGGGGGSCTTSCEEEEECTTTTCSCHHHHH
T ss_pred EeeCCHHhcCCccc-CC-----CCcceeeccCCC--------CCCC---CCCccccccCCCCEEEEEcCCCCcCcHHHHH
Confidence 55444444322100 00 000011111110 0112 4556 33345677999999999755688899
Q ss_pred HHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcccCcCcEEeecCcchHHHHH
Q 012061 294 ELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAA 373 (472)
Q Consensus 294 ~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal 373 (472)
.+++++.+.+.+++|+.+... ..+.+.. ++ +|+.+.+|+|+..+|++ +++||+|||+||++||+
T Consensus 262 ~~~~~l~~~~~~~~~~~g~~~----~~~~l~~-~~---------~~v~~~~~~~~~~~l~~--ad~~v~~~g~~t~~Ea~ 325 (412)
T 3otg_A 262 AAIDGLAGLDADVLVASGPSL----DVSGLGE-VP---------ANVRLESWVPQAALLPH--VDLVVHHGGSGTTLGAL 325 (412)
T ss_dssp HHHHHHHTSSSEEEEECCSSC----CCTTCCC-CC---------TTEEEESCCCHHHHGGG--CSEEEESCCHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEECCCC----Chhhhcc-CC---------CcEEEeCCCCHHHHHhc--CcEEEECCchHHHHHHH
Confidence 999999988999999887621 1111111 22 78999999999999966 66799999999999999
Q ss_pred HhCCcEEecCCcccchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCC
Q 012061 374 RHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGS 453 (472)
Q Consensus 374 ~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~ 453 (472)
++|+|+|++|...||..|+..+++.|+|..+ +...+++++|.++|.++|+|+++++++.+.++++.+. .+
T Consensus 326 a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~------~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~----~~ 395 (412)
T 3otg_A 326 GAGVPQLSFPWAGDSFANAQAVAQAGAGDHL------LPDNISPDSVSGAAKRLLAEESYRAGARAVAAEIAAM----PG 395 (412)
T ss_dssp HHTCCEEECCCSTTHHHHHHHHHHHTSEEEC------CGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHS----CC
T ss_pred HhCCCEEecCCchhHHHHHHHHHHcCCEEec------CcccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcC----CC
Confidence 9999999999999999999999999999999 7777899999999999999999999999888886653 56
Q ss_pred hHHHHHHHHHHH
Q 012061 454 SERTFKELIDKW 465 (472)
Q Consensus 454 ~~~~~~~~~~~~ 465 (472)
..+.++.+.+-+
T Consensus 396 ~~~~~~~~~~l~ 407 (412)
T 3otg_A 396 PDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHTTHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 666666555544
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=1.7e-30 Score=250.89 Aligned_cols=334 Identities=13% Similarity=0.085 Sum_probs=199.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCC--ccchhhhhhhhhhcCCCccceEEeecCCCCCCCCC---C
Q 012061 12 HVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTV--SLAETQHVSHFLSAYPQVTAKRFHLLPFDPNSANA---T 86 (472)
Q Consensus 12 ~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 86 (472)
||+|...++-||++|.++||++|+++||+|+|+++.... +.+.+.| +++...+.. .+.. .
T Consensus 4 ~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g-------------~~~~~i~~~--~~~~~~~~ 68 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAG-------------LPLHLIQVS--GLRGKGLK 68 (365)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGT-------------CCEEECC------------
T ss_pred cEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcC-------------CcEEEEECC--CcCCCCHH
Confidence 899999888899999999999999999999999876421 1122222 223332221 1111 1
Q ss_pred ChHHHHHHHHHHhHhhhhhhcC-CCCcEEEEcCC-ChhhhHHHHHhcCCCeEEEeCccHHHHHHHhhhhhhhhccCCCCC
Q 012061 87 DPFLLRWEAIRRSAHLLAPLLS-PPLSALITDVT-LISAVLPVTINLHLPNYVLFTASAKMFSLTASFPAIVASKSTSSG 164 (472)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~ll~-~~~D~vI~D~~-~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 164 (472)
..+...+.. .........+++ .+||+||++.. ....+..+|+.+|||+++.-..
T Consensus 69 ~~~~~~~~~-~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n----------------------- 124 (365)
T 3s2u_A 69 SLVKAPLEL-LKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN----------------------- 124 (365)
T ss_dssp ----CHHHH-HHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS-----------------------
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc-----------------------
Confidence 111111111 122234456677 89999999873 3334556789999998864111
Q ss_pred CCCCCCCceeCCCCCCCCCCCCCCCccCCchhHHHHHHHhcccccccceEEEcccccccHHHHHHHhcccccCCCCCeeE
Q 012061 165 SVEFDDDFIEIPGLPPIPLSSVPPAVMDSKSLFATSFLENGNSFVKSNGVLINSFDALEADTLVALNGRRVVAGLPPVYA 244 (472)
Q Consensus 165 ~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~p~~p~v~~ 244 (472)
.+||+ ..+++.+ .++.+ +.++++. ++...+.++
T Consensus 125 ---------~~~G~------------------~nr~l~~------~a~~v-~~~~~~~-------------~~~~~k~~~ 157 (365)
T 3s2u_A 125 ---------AVAGT------------------ANRSLAP------IARRV-CEAFPDT-------------FPASDKRLT 157 (365)
T ss_dssp ---------SSCCH------------------HHHHHGG------GCSEE-EESSTTS-------------SCC---CEE
T ss_pred ---------hhhhh------------------HHHhhcc------cccee-eeccccc-------------ccCcCcEEE
Confidence 01111 0111111 12222 2233221 122346677
Q ss_pred ecccCCCCccCCCCCCccchhhhccCCCCCceEEEeecccccCCHHHHHHHHHHHHhC----CCceEEEEeCCCCCcchh
Q 012061 245 VGPLLPCEFEKRDDPSTSLILKWLDDQPEGSVVYVSFGSRLALSMEQTKELGDGLLSS----GCRFLWVVKGKNVDKEDE 320 (472)
Q Consensus 245 vGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~----~~~~~~~~~~~~~~~~~~ 320 (472)
+|+......... ........+++++|+|..||.+... ..+.+.+++..+ +..++|+.|. .+.
T Consensus 158 ~g~pvr~~~~~~-------~~~~~~~~~~~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~~~G~-----~~~ 223 (365)
T 3s2u_A 158 TGNPVRGELFLD-------AHARAPLTGRRVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRHQAGR-----QHA 223 (365)
T ss_dssp CCCCCCGGGCCC-------TTSSCCCTTSCCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEEECCT-----TTH
T ss_pred ECCCCchhhccc-------hhhhcccCCCCcEEEEECCcCCccc--cchhhHHHHHhcccccceEEEEecCc-----ccc
Confidence 886654432211 1112222345568999999986543 223344555443 3456666654 222
Q ss_pred HHHHhhhhHHHHHHhhcCCceeccCCChH-HHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCc----ccchhhHHHH
Q 012061 321 ESLKNVLGHELMEKIKDQGLVVKNWVDQD-KVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHF----GDQKINAEAV 395 (472)
Q Consensus 321 ~~~~~~~p~~~~~~~~~~~~~~~~~~pq~-~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~v 395 (472)
+...+. +.+ ...++.+.+|+++. ++++ .++++|||+|.+|++|++++|+|+|.+|+. .+|..||+.+
T Consensus 224 ~~~~~~----~~~--~~~~~~v~~f~~dm~~~l~--~aDlvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l 295 (365)
T 3s2u_A 224 EITAER----YRT--VAVEADVAPFISDMAAAYA--WADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFL 295 (365)
T ss_dssp HHHHHH----HHH--TTCCCEEESCCSCHHHHHH--HCSEEEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHH
T ss_pred ccccce----ecc--cccccccccchhhhhhhhc--cceEEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHH
Confidence 222211 111 12577888999875 7884 466799999999999999999999999975 5899999999
Q ss_pred HhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHH
Q 012061 396 ERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELID 463 (472)
Q Consensus 396 ~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 463 (472)
++.|+|+.+ +...++++.|.++|.++|+|++.++ ++++.+++ .+...++++.++.+++
T Consensus 296 ~~~G~a~~l------~~~~~~~~~L~~~i~~ll~d~~~~~---~m~~~a~~-~~~~~aa~~ia~~i~~ 353 (365)
T 3s2u_A 296 VRSGAGRLL------PQKSTGAAELAAQLSEVLMHPETLR---SMADQARS-LAKPEATRTVVDACLE 353 (365)
T ss_dssp HTTTSEEEC------CTTTCCHHHHHHHHHHHHHCTHHHH---HHHHHHHH-TCCTTHHHHHHHHHHH
T ss_pred HHCCCEEEe------ecCCCCHHHHHHHHHHHHCCHHHHH---HHHHHHHh-cCCccHHHHHHHHHHH
Confidence 999999999 7788999999999999999997664 44444444 3444555554444443
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.5e-28 Score=211.17 Aligned_cols=158 Identities=23% Similarity=0.428 Sum_probs=138.2
Q ss_pred hhhhccCCCCCceEEEeecccc-cCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCcee
Q 012061 264 ILKWLDDQPEGSVVYVSFGSRL-ALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVV 342 (472)
Q Consensus 264 ~~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 342 (472)
+.+|++..+++++|||++||.. ....+.+..++++|++.+.+++|+.+... . ..++ +|+++
T Consensus 11 ~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~---~------~~~~---------~~v~~ 72 (170)
T 2o6l_A 11 MEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK---P------DTLG---------LNTRL 72 (170)
T ss_dssp HHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC---C------TTCC---------TTEEE
T ss_pred HHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC---c------ccCC---------CcEEE
Confidence 9999988777789999999995 44678889999999988899999987621 0 1122 78999
Q ss_pred ccCCChHHHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHH
Q 012061 343 KNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGL 422 (472)
Q Consensus 343 ~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~ 422 (472)
.+|+|+.+++.|+++++||||||+||++|++++|+|+|++|...||..||+++++.|+|+.+ +...+++++|.+
T Consensus 73 ~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~------~~~~~~~~~l~~ 146 (170)
T 2o6l_A 73 YKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRV------DFNTMSSTDLLN 146 (170)
T ss_dssp ESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEEC------CTTTCCHHHHHH
T ss_pred ecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEe------ccccCCHHHHHH
Confidence 99999999998899999999999999999999999999999999999999999999999999 777789999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHHHH
Q 012061 423 KIKDLMANDFLREQAKRIEEEAR 445 (472)
Q Consensus 423 ~i~~~l~~~~~~~~a~~l~~~~~ 445 (472)
+|+++++|++|+++++++++.++
T Consensus 147 ~i~~ll~~~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 147 ALKRVINDPSYKENVMKLSRIQH 169 (170)
T ss_dssp HHHHHHHCHHHHHHHHHHC----
T ss_pred HHHHHHcCHHHHHHHHHHHHHhh
Confidence 99999999999999999998875
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.86 E-value=1.5e-19 Score=174.62 Aligned_cols=338 Identities=14% Similarity=0.092 Sum_probs=201.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCc--cchhhhhhhhhhcCCCccceEEeecCCCCCCCCCCCh
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVS--LAETQHVSHFLSAYPQVTAKRFHLLPFDPNSANATDP 88 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (472)
|||++++.+..||..+++.|++.|+++||+|++++...... .....| +.+...+.. .+.....
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g-------------~~~~~~~~~--~~~~~~~ 71 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHG-------------IEIDFIRIS--GLRGKGI 71 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGT-------------CEEEECCCC--CCTTCCH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccC-------------CceEEecCC--ccCcCcc
Confidence 89999998888999999999999999999999998764211 111112 122222211 1111111
Q ss_pred HHHHH--HHHHHhHhhhhhhcC-CCCcEEEEcCCC-hhhhHHHHHhcCCCeEEEeCccHHHHHHHhhhhhhhhccCCCCC
Q 012061 89 FLLRW--EAIRRSAHLLAPLLS-PPLSALITDVTL-ISAVLPVTINLHLPNYVLFTASAKMFSLTASFPAIVASKSTSSG 164 (472)
Q Consensus 89 ~~~~~--~~~~~~~~~~~~ll~-~~~D~vI~D~~~-~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 164 (472)
...+. .........+.++++ .+||+|+++... ...+..+++.+|+|+++.....
T Consensus 72 ~~~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~---------------------- 129 (364)
T 1f0k_A 72 KALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG---------------------- 129 (364)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC----------------------
Confidence 11110 001112234455666 799999998722 3345667888999987542210
Q ss_pred CCCCCCCceeCCCCCCCCCCCCCCCccCCchhHHHHHHHhcccccccceEEEcccccccHHHHHHHhcccccCCCCCeeE
Q 012061 165 SVEFDDDFIEIPGLPPIPLSSVPPAVMDSKSLFATSFLENGNSFVKSNGVLINSFDALEADTLVALNGRRVVAGLPPVYA 244 (472)
Q Consensus 165 ~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~p~~p~v~~ 244 (472)
.+ . ...+.+ .+.++.+++.+... .+++..
T Consensus 130 ----------~~-----------~-------~~~~~~------~~~~d~v~~~~~~~-----------------~~~~~~ 158 (364)
T 1f0k_A 130 ----------IA-----------G-------LTNKWL------AKIATKVMQAFPGA-----------------FPNAEV 158 (364)
T ss_dssp ----------SC-----------C-------HHHHHH------TTTCSEEEESSTTS-----------------SSSCEE
T ss_pred ----------CC-----------c-------HHHHHH------HHhCCEEEecChhh-----------------cCCceE
Confidence 00 0 001111 12344555433211 124455
Q ss_pred ecccCCCCccCCCCCCccchhhhccCCCCCceEEEeecccccCCHHHHHHHHHHHHhC--CCceEEEEeCCCCCcchhHH
Q 012061 245 VGPLLPCEFEKRDDPSTSLILKWLDDQPEGSVVYVSFGSRLALSMEQTKELGDGLLSS--GCRFLWVVKGKNVDKEDEES 322 (472)
Q Consensus 245 vGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~--~~~~~~~~~~~~~~~~~~~~ 322 (472)
+|+........ +.. ..+.+...+++++|++..|+... ......+++++..+ +.++++++|.. ..+.
T Consensus 159 i~n~v~~~~~~--~~~---~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~-----~~~~ 226 (364)
T 1f0k_A 159 VGNPVRTDVLA--LPL---PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKG-----SQQS 226 (364)
T ss_dssp CCCCCCHHHHT--SCC---HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTT-----CHHH
T ss_pred eCCccchhhcc--cch---hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCc-----hHHH
Confidence 55433211111 111 22222223345578888888742 34444555666543 45666777662 1122
Q ss_pred HHhhhhHHHHHHhhcCCceeccCCC-hHHHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCc---ccchhhHHHHHhh
Q 012061 323 LKNVLGHELMEKIKDQGLVVKNWVD-QDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHF---GDQKINAEAVERA 398 (472)
Q Consensus 323 ~~~~~p~~~~~~~~~~~~~~~~~~p-q~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~v~~~ 398 (472)
+.+.. +...-+++.+.+|++ ...+++. ++++|+++|.++++||+++|+|+|+.|.. .||..|++.+++.
T Consensus 227 l~~~~-----~~~~~~~v~~~g~~~~~~~~~~~--ad~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~ 299 (364)
T 1f0k_A 227 VEQAY-----AEAGQPQHKVTEFIDDMAAAYAW--ADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA 299 (364)
T ss_dssp HHHHH-----HHTTCTTSEEESCCSCHHHHHHH--CSEEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT
T ss_pred HHHHH-----hhcCCCceEEecchhhHHHHHHh--CCEEEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC
Confidence 22111 111114789999994 4578855 56699999999999999999999999987 7999999999999
Q ss_pred CeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHh
Q 012061 399 GLGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELIDKWKC 467 (472)
Q Consensus 399 G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 467 (472)
|.|..+ +....+++++.++|.++ |++.+++..+-+++ . ....+..+.++.+.+.+.+
T Consensus 300 g~g~~~------~~~d~~~~~la~~i~~l--~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 300 GAAKII------EQPQLSVDAVANTLAGW--SRETLLTMAERARA---A-SIPDATERVANEVSRVARA 356 (364)
T ss_dssp TSEEEC------CGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHH---T-CCTTHHHHHHHHHHHHHTT
T ss_pred CcEEEe------ccccCCHHHHHHHHHhc--CHHHHHHHHHHHHH---h-hccCHHHHHHHHHHHHHHH
Confidence 999999 66667799999999988 88777555444433 2 3455666666666666653
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.65 E-value=1.9e-16 Score=138.95 Aligned_cols=142 Identities=15% Similarity=0.155 Sum_probs=95.1
Q ss_pred CCCCceEEEeecccccCCHHHHHHH-----HHHHHhCC-CceEEEEeCCCCCcchhHHH-Hhh--------hhHHH----
Q 012061 271 QPEGSVVYVSFGSRLALSMEQTKEL-----GDGLLSSG-CRFLWVVKGKNVDKEDEESL-KNV--------LGHEL---- 331 (472)
Q Consensus 271 ~~~~~~v~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~~~~~~~~~~~~~~~~~~-~~~--------~p~~~---- 331 (472)
.+++++|||+.||... -++.+..+ +++|.+.+ .++++++|..... ..+.+ ... +|.+-
T Consensus 25 ~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~--~~~~~~~~~~~~~~~~l~p~~~~~~~ 101 (224)
T 2jzc_A 25 IIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS--EFEHLVQERGGQRESQKIPIDQFGCG 101 (224)
T ss_dssp CCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC--CCCSHHHHHTCEECSCCCSSCTTCTT
T ss_pred CCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh--hHHHHHHhhhcccccccccccccccc
Confidence 3456799999999832 35555544 48888777 7898988862110 00000 000 01000
Q ss_pred --HH----HhhcCCceeccCCChH-HHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCc----ccchhhHHHHHhhCe
Q 012061 332 --ME----KIKDQGLVVKNWVDQD-KVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHF----GDQKINAEAVERAGL 400 (472)
Q Consensus 332 --~~----~~~~~~~~~~~~~pq~-~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~v~~~G~ 400 (472)
.+ ....-++.+.+|+++. .+++. .++++|||||+||++|++++|+|+|++|.. .||..||+++++.|+
T Consensus 102 ~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~-~AdlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~ 180 (224)
T 2jzc_A 102 DTARQYVLMNGKLKVIGFDFSTKMQSIIRD-YSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGY 180 (224)
T ss_dssp CSCEEEESTTTSSEEEECCSSSSHHHHHHH-HCSCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSC
T ss_pred ccccccccccCCceEEEeeccchHHHHHHh-cCCEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCC
Confidence 00 0001234566888776 77840 566799999999999999999999999985 369999999999999
Q ss_pred eeEEeecCCCCcCCcCHHHHHHHHHHH
Q 012061 401 GMWVRSWGWGTELRAKGDEIGLKIKDL 427 (472)
Q Consensus 401 G~~l~~~~~~~~~~~~~~~l~~~i~~~ 427 (472)
|+.+ +++.|.++|+++
T Consensus 181 ~~~~-----------~~~~L~~~i~~l 196 (224)
T 2jzc_A 181 VWSC-----------APTETGLIAGLR 196 (224)
T ss_dssp CCEE-----------CSCTTTHHHHHH
T ss_pred EEEc-----------CHHHHHHHHHHH
Confidence 8766 446677777766
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.63 E-value=4.5e-15 Score=135.93 Aligned_cols=115 Identities=9% Similarity=0.041 Sum_probs=86.4
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhh-cCCceeccCCChH-H
Q 012061 273 EGSVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIK-DQGLVVKNWVDQD-K 350 (472)
Q Consensus 273 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~pq~-~ 350 (472)
+.+.|+|++|.... ......++++|.+.. ++.++.+.. ....+++. +... ..|+.+..|+++. .
T Consensus 156 ~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~---~~~~~~l~--------~~~~~~~~v~v~~~~~~m~~ 221 (282)
T 3hbm_A 156 KKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSS---NPNLKKLQ--------KFAKLHNNIRLFIDHENIAK 221 (282)
T ss_dssp CCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTT---CTTHHHHH--------HHHHTCSSEEEEESCSCHHH
T ss_pred cCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCC---chHHHHHH--------HHHhhCCCEEEEeCHHHHHH
Confidence 34589999997632 235566788886644 566777662 22222222 1111 2588999999877 6
Q ss_pred HhcccCcCcEEeecCcchHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEE
Q 012061 351 VLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWV 404 (472)
Q Consensus 351 ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l 404 (472)
++ ..++++||+|| +|++|+++.|+|+|++|+..+|..||+.+++.|+++.+
T Consensus 222 ~m--~~aDlvI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~G~~~~~ 272 (282)
T 3hbm_A 222 LM--NESNKLIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKKGYEVEY 272 (282)
T ss_dssp HH--HTEEEEEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHTTCEEEC
T ss_pred HH--HHCCEEEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHCCCEEEc
Confidence 78 55677999999 89999999999999999999999999999999999988
No 25
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.42 E-value=4.1e-12 Score=123.65 Aligned_cols=109 Identities=17% Similarity=0.170 Sum_probs=80.3
Q ss_pred CCceeccCCChH---HHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEeecCCCCcCC
Q 012061 338 QGLVVKNWVDQD---KVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTELR 414 (472)
Q Consensus 338 ~~~~~~~~~pq~---~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~ 414 (472)
+++++.+++++. .++++ ++++|+-.|.. +.||.++|+|+|++|-.++++. +.+.|.|+.+ ..
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~--ad~vv~~SGg~-~~EA~a~g~PvV~~~~~~~~~e----~v~~g~~~lv------~~-- 346 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRK--SYLVFTDSGGV-QEEAPGMGVPVLVLRDTTERPE----GIEAGTLKLI------GT-- 346 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHH--EEEEEECCHHH-HHHGGGTTCCEEECCSSCSCHH----HHHHTSEEEC------CS--
T ss_pred CCEEEeCCCCHHHHHHHHHh--cCEEEECCccH-HHHHHHhCCCEEEecCCCcchh----heeCCcEEEc------CC--
Confidence 688888998743 66644 55699887532 3699999999999976666654 3577888777 42
Q ss_pred cCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHH
Q 012061 415 AKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELIDKWK 466 (472)
Q Consensus 415 ~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (472)
++++|.+++.++++|++.+++..+ ... ..++++++.+.++.+.+.+.
T Consensus 347 -d~~~l~~ai~~ll~~~~~~~~m~~---~~~-~~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 347 -NKENLIKEALDLLDNKESHDKMAQ---AAN-PYGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp -CHHHHHHHHHHHHHCHHHHHHHHH---SCC-TTCCSCHHHHHHHHHHHHHT
T ss_pred -CHHHHHHHHHHHHcCHHHHHHHHh---hcC-cccCCcHHHHHHHHHHHHhC
Confidence 789999999999999877755433 222 25778888888877776654
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.40 E-value=2.9e-11 Score=116.98 Aligned_cols=107 Identities=17% Similarity=0.192 Sum_probs=75.6
Q ss_pred CCceeccCCChH---HHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEeecCCCCcCC
Q 012061 338 QGLVVKNWVDQD---KVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTELR 414 (472)
Q Consensus 338 ~~~~~~~~~pq~---~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~ 414 (472)
+++++.+++++. .++ +.+++||+.+| |.++||+++|+|+|+.+..+++.. +.+.|.|+.+ +
T Consensus 255 ~~v~~~g~~g~~~~~~~~--~~ad~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~g~g~lv------~--- 318 (376)
T 1v4v_A 255 RNFVLLDPLEYGSMAALM--RASLLLVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKAGILKLA------G--- 318 (376)
T ss_dssp TTEEEECCCCHHHHHHHH--HTEEEEEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHHTSEEEC------C---
T ss_pred CCEEEECCCCHHHHHHHH--HhCcEEEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcCCceEEC------C---
Confidence 588888666654 677 45666999883 446699999999999987777665 3566888877 4
Q ss_pred cCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHH
Q 012061 415 AKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELIDK 464 (472)
Q Consensus 415 ~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 464 (472)
.++++|.+++.++++|++.+++..+ ..+ .+..++++.+.++.+.+.
T Consensus 319 ~d~~~la~~i~~ll~d~~~~~~~~~---~~~-~~~~~~~~~~i~~~i~~~ 364 (376)
T 1v4v_A 319 TDPEGVYRVVKGLLENPEELSRMRK---AKN-PYGDGKAGLMVARGVAWR 364 (376)
T ss_dssp SCHHHHHHHHHHHHTCHHHHHHHHH---SCC-SSCCSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhChHhhhhhcc---cCC-CCCCChHHHHHHHHHHHH
Confidence 3899999999999999876644433 222 234556666555555443
No 27
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.40 E-value=4e-12 Score=123.37 Aligned_cols=163 Identities=14% Similarity=0.176 Sum_probs=99.1
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHHHhC-----CCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhh-cCCceeccCC
Q 012061 273 EGSVVYVSFGSRLALSMEQTKELGDGLLSS-----GCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIK-DQGLVVKNWV 346 (472)
Q Consensus 273 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~ 346 (472)
++++++++.|...... +.+..+++++..+ +.++++..+. +....+.+. +... .+++.+.+++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~---~~~~~~~l~--------~~~~~~~~v~~~g~~ 271 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHL---NPNVREPVN--------RILGHVKNVILIDPQ 271 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCB---CHHHHHHHH--------HHHTTCTTEEEECCC
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCC---CHHHHHHHH--------HHhhcCCCEEEeCCC
Confidence 4557888888764332 2344455555432 3445443332 100111111 1111 2688887777
Q ss_pred ChH---HHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHH
Q 012061 347 DQD---KVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLK 423 (472)
Q Consensus 347 pq~---~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~ 423 (472)
++. .+++. +++||+.+| +.++||+++|+|+|+.+..++.. .+.+.|.|+.+ +. ++++|.++
T Consensus 272 ~~~~~~~~~~~--ad~~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~----e~v~~g~g~lv------~~---d~~~la~~ 335 (384)
T 1vgv_A 272 EYLPFVWLMNH--AWLILTDSG-GIQEEAPSLGKPVLVMRDTTERP----EAVTAGTVRLV------GT---DKQRIVEE 335 (384)
T ss_dssp CHHHHHHHHHH--CSEEEESSS-TGGGTGGGGTCCEEEESSCCSCH----HHHHHTSEEEE------CS---SHHHHHHH
T ss_pred CHHHHHHHHHh--CcEEEECCc-chHHHHHHcCCCEEEccCCCCcc----hhhhCCceEEe------CC---CHHHHHHH
Confidence 654 56644 566999985 45889999999999998755443 34566899988 54 88999999
Q ss_pred HHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHh
Q 012061 424 IKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELIDKWKC 467 (472)
Q Consensus 424 i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 467 (472)
|.++++|++.+++ +++..++ ...+.+..+.++.+.+.+.+
T Consensus 336 i~~ll~d~~~~~~---~~~~~~~-~~~~~~~~~i~~~~~~~~~~ 375 (384)
T 1vgv_A 336 VTRLLKDENEYQA---MSRAHNP-YGDGQACSRILEALKNNRIS 375 (384)
T ss_dssp HHHHHHCHHHHHH---HHSSCCT-TCCSCHHHHHHHHHHHTCCC
T ss_pred HHHHHhChHHHhh---hhhccCC-CcCCCHHHHHHHHHHHHHHh
Confidence 9999999876543 3333333 34456666666666554443
No 28
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.40 E-value=9.5e-12 Score=120.91 Aligned_cols=104 Identities=16% Similarity=0.151 Sum_probs=74.6
Q ss_pred CCceeccCCChH---HHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEeecCCCCcCC
Q 012061 338 QGLVVKNWVDQD---KVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTELR 414 (472)
Q Consensus 338 ~~~~~~~~~pq~---~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~ 414 (472)
+++++.+++++. .+++. ++++|+-.| |.+.||.++|+|+|+..-..+++ .+.+.|.++.+ ..
T Consensus 288 ~~v~~~~~lg~~~~~~l~~~--ad~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~G~~~lv------~~-- 352 (396)
T 3dzc_A 288 SNIVLIEPQQYLPFVYLMDR--AHIILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAAGTVKLV------GT-- 352 (396)
T ss_dssp TTEEEECCCCHHHHHHHHHH--CSEEEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHHTSEEEC------TT--
T ss_pred CCEEEeCCCCHHHHHHHHHh--cCEEEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHcCceEEc------CC--
Confidence 678887887643 56644 566999988 66679999999999986555553 34667888666 32
Q ss_pred cCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHH
Q 012061 415 AKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKEL 461 (472)
Q Consensus 415 ~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 461 (472)
++++|.+++.++++|++.+++..+.+ .. .++++++.++++.+
T Consensus 353 -d~~~l~~ai~~ll~d~~~~~~m~~~~---~~-~~~~~aa~ri~~~l 394 (396)
T 3dzc_A 353 -NQQQICDALSLLLTDPQAYQAMSQAH---NP-YGDGKACQRIADIL 394 (396)
T ss_dssp -CHHHHHHHHHHHHHCHHHHHHHHTSC---CT-TCCSCHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHcCHHHHHHHhhcc---CC-CcCChHHHHHHHHH
Confidence 68999999999999987765444332 22 57777777666544
No 29
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.36 E-value=1.2e-10 Score=113.04 Aligned_cols=355 Identities=11% Similarity=0.052 Sum_probs=180.5
Q ss_pred CCCCEEEEEcC--C--CccChHHHHHHHHHHHhCCCeEEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCCCCCCC
Q 012061 8 DSHPHVALIPS--A--GMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPFDPNSA 83 (472)
Q Consensus 8 ~~~~~il~~~~--~--~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (472)
.++|||++++. + ..|.-.-+..|++.| +||+|++++......... .+.. ... +.....+.. ..
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~-----~~~~-~~~---~~~~~~~~~-~~- 68 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAH-----AYDK-TLD---YEVIRWPRS-VM- 68 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHH-----HHHT-TCS---SEEEEESSS-SC-
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchh-----hhcc-ccc---eEEEEcccc-cc-
Confidence 35789999975 3 468888899999999 799999999865322100 1110 111 111111110 00
Q ss_pred CCCChHHHHHHHHHHhHhhhhhhcC-CCCcEEEEcC-CChhhhHHHHHhcCCCeEEEeCccHHHHHHHhhhhhhhhccCC
Q 012061 84 NATDPFLLRWEAIRRSAHLLAPLLS-PPLSALITDV-TLISAVLPVTINLHLPNYVLFTASAKMFSLTASFPAIVASKST 161 (472)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~ll~-~~~D~vI~D~-~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 161 (472)
.... .....+.++++ .+||+|++.. ........+++++|+|.+++.........
T Consensus 69 --~~~~--------~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~-------------- 124 (394)
T 3okp_A 69 --LPTP--------TTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW-------------- 124 (394)
T ss_dssp --CSCH--------HHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH--------------
T ss_pred --ccch--------hhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh--------------
Confidence 0111 11123445666 7999999765 22335566788899995554332211000
Q ss_pred CCCCCCCCCCceeCCCCCCCCCCCCCCCccCCchhHHHHHHHhcccccccceEEEcccccccHHHHHHHhcccccCCCCC
Q 012061 162 SSGSVEFDDDFIEIPGLPPIPLSSVPPAVMDSKSLFATSFLENGNSFVKSNGVLINSFDALEADTLVALNGRRVVAGLPP 241 (472)
Q Consensus 162 ~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~p~~p~ 241 (472)
... ...+...+. ..+.++.+++.|....+. +... .....+
T Consensus 125 ------------------------------~~~-~~~~~~~~~--~~~~~d~ii~~s~~~~~~-----~~~~--~~~~~~ 164 (394)
T 3okp_A 125 ------------------------------SML-PGSRQSLRK--IGTEVDVLTYISQYTLRR-----FKSA--FGSHPT 164 (394)
T ss_dssp ------------------------------TTS-HHHHHHHHH--HHHHCSEEEESCHHHHHH-----HHHH--HCSSSE
T ss_pred ------------------------------hhc-chhhHHHHH--HHHhCCEEEEcCHHHHHH-----HHHh--cCCCCC
Confidence 000 011111111 124566777766432221 1111 011124
Q ss_pred eeEecccCCCCccCC-CCCCccchhhhccCCCCCceEEEeeccccc-CCHHHHHHHHHHHHhC--CCceEEEEeCCCCCc
Q 012061 242 VYAVGPLLPCEFEKR-DDPSTSLILKWLDDQPEGSVVYVSFGSRLA-LSMEQTKELGDGLLSS--GCRFLWVVKGKNVDK 317 (472)
Q Consensus 242 v~~vGpl~~~~~~~~-~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~~~~al~~~--~~~~~~~~~~~~~~~ 317 (472)
+..+.+-.....-.+ .+.....+.+.+...+ +..+++..|+... ...+.+.+++..+.+. +.+++ ++|. +
T Consensus 165 ~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~-i~G~----g 238 (394)
T 3okp_A 165 FEHLPSGVDVKRFTPATPEDKSATRKKLGFTD-TTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLL-IVGS----G 238 (394)
T ss_dssp EEECCCCBCTTTSCCCCHHHHHHHHHHTTCCT-TCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEE-EECC----C
T ss_pred eEEecCCcCHHHcCCCCchhhHHHHHhcCCCc-CceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEE-EEcC----c
Confidence 555544332211111 1111011333333222 2356677787632 2344444444444432 44443 3443 1
Q ss_pred chhHHHHhhhhHHHHHHhhcCCceeccCCChH---HHhcccCcCcEEe-----------ecCcchHHHHHHhCCcEEecC
Q 012061 318 EDEESLKNVLGHELMEKIKDQGLVVKNWVDQD---KVLSHRAVGGFVS-----------HGGWNSLVEAARHGVPLLVWP 383 (472)
Q Consensus 318 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~---~ll~~~~~~~~I~-----------HgG~~s~~eal~~GvP~l~~P 383 (472)
...+.+.... .+ -.+++.+.+|+|+. .+++. ++++|. -|..+++.||+++|+|+|+.+
T Consensus 239 ~~~~~l~~~~-~~-----~~~~v~~~g~~~~~~~~~~~~~--ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~ 310 (394)
T 3okp_A 239 RYESTLRRLA-TD-----VSQNVKFLGRLEYQDMINTLAA--ADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGT 310 (394)
T ss_dssp TTHHHHHHHT-GG-----GGGGEEEEESCCHHHHHHHHHH--CSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECS
T ss_pred hHHHHHHHHH-hc-----ccCeEEEcCCCCHHHHHHHHHh--CCEEEecCccccccccccccCcHHHHHHHcCCCEEEeC
Confidence 2222222211 10 12688999999866 45644 555776 555679999999999999977
Q ss_pred CcccchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHH-HHHHhccCCChHHHHHHHH
Q 012061 384 HFGDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEE-ARKAIGVGGSSERTFKELI 462 (472)
Q Consensus 384 ~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~-~~~~~~~~g~~~~~~~~~~ 462 (472)
..+ ....+ +.|.|..+ +. -+++++.++|.++++|++.+++..+-+.+ +++ .=+..+.++.++
T Consensus 311 ~~~----~~e~i-~~~~g~~~------~~--~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~----~~s~~~~~~~~~ 373 (394)
T 3okp_A 311 SGG----APETV-TPATGLVV------EG--SDVDKLSELLIELLDDPIRRAAMGAAGRAHVEA----EWSWEIMGERLT 373 (394)
T ss_dssp STT----GGGGC-CTTTEEEC------CT--TCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----HTBHHHHHHHHH
T ss_pred CCC----hHHHH-hcCCceEe------CC--CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH----hCCHHHHHHHHH
Confidence 542 22222 23477777 33 36899999999999988755433333222 222 226666777777
Q ss_pred HHHHhccC
Q 012061 463 DKWKCNNN 470 (472)
Q Consensus 463 ~~~~~~~~ 470 (472)
+-+.+..+
T Consensus 374 ~~~~~~~r 381 (394)
T 3okp_A 374 NILQSEPR 381 (394)
T ss_dssp HHHHSCCC
T ss_pred HHHHHhcc
Confidence 77766544
No 30
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.32 E-value=3.7e-10 Score=111.43 Aligned_cols=84 Identities=14% Similarity=0.044 Sum_probs=62.3
Q ss_pred CCceeccCCChH---HHhcccCcCcEEeec---C-cchHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEeecCCC
Q 012061 338 QGLVVKNWVDQD---KVLSHRAVGGFVSHG---G-WNSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWG 410 (472)
Q Consensus 338 ~~~~~~~~~pq~---~ll~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~ 410 (472)
+++.+.+++++. .+++. ++++|.-. | .++++||+++|+|+|+.+. ......+++.+.|+.+
T Consensus 306 ~~v~~~g~~~~~~~~~~~~~--adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~~~g~~~------ 373 (438)
T 3c48_A 306 KRIRFLDPRPPSELVAVYRA--ADIVAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAEGETGLLV------ 373 (438)
T ss_dssp TTEEEECCCCHHHHHHHHHH--CSEEEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCBTTTEEEE------
T ss_pred CcEEEcCCCChHHHHHHHHh--CCEEEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhCCCcEEEC------
Confidence 688999999875 56654 45577643 2 4689999999999999753 3445555555678888
Q ss_pred CcCCcCHHHHHHHHHHHhcCHHHHH
Q 012061 411 TELRAKGDEIGLKIKDLMANDFLRE 435 (472)
Q Consensus 411 ~~~~~~~~~l~~~i~~~l~~~~~~~ 435 (472)
+. -+++++.++|.++++|++.++
T Consensus 374 ~~--~d~~~la~~i~~l~~~~~~~~ 396 (438)
T 3c48_A 374 DG--HSPHAWADALATLLDDDETRI 396 (438)
T ss_dssp SS--CCHHHHHHHHHHHHHCHHHHH
T ss_pred CC--CCHHHHHHHHHHHHcCHHHHH
Confidence 43 378999999999999886543
No 31
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.27 E-value=4.5e-09 Score=102.39 Aligned_cols=112 Identities=13% Similarity=0.148 Sum_probs=74.7
Q ss_pred cCCceeccCCChH---HHhcccCcCcEEee----cCc-chHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEeecC
Q 012061 337 DQGLVVKNWVDQD---KVLSHRAVGGFVSH----GGW-NSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWG 408 (472)
Q Consensus 337 ~~~~~~~~~~pq~---~ll~~~~~~~~I~H----gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~ 408 (472)
.+++.+.+++++. .++..+ +++|.- .|. +++.||+++|+|+|+.+. ......+.+.+.|..+
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~a--dv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~~~g~~~---- 331 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSA--DVYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADGDAGRLV---- 331 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHS--SEEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTTTSSEEC----
T ss_pred cCcEEEEecCCHHHHHHHHHHC--CEEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCCCceEEe----
Confidence 3788999999975 667554 457744 344 489999999999999864 4555666666778877
Q ss_pred CCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHH
Q 012061 409 WGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELIDKWK 466 (472)
Q Consensus 409 ~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (472)
+. -+.+++.++|.++++|++.+++. ++..++... .=+..+.++.+++.+.
T Consensus 332 --~~--~d~~~l~~~i~~l~~~~~~~~~~---~~~~~~~~~-~~s~~~~~~~~~~~~~ 381 (406)
T 2gek_A 332 --PV--DDADGMAAALIGILEDDQLRAGY---VARASERVH-RYDWSVVSAQIMRVYE 381 (406)
T ss_dssp --CT--TCHHHHHHHHHHHHHCHHHHHHH---HHHHHHHGG-GGBHHHHHHHHHHHHH
T ss_pred --CC--CCHHHHHHHHHHHHcCHHHHHHH---HHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 43 37899999999999988755433 233333222 2344455555544443
No 32
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.25 E-value=8.6e-10 Score=106.39 Aligned_cols=107 Identities=18% Similarity=0.198 Sum_probs=73.4
Q ss_pred CCceeccCCChH---HHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEeecCCCCcCC
Q 012061 338 QGLVVKNWVDQD---KVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTELR 414 (472)
Q Consensus 338 ~~~~~~~~~pq~---~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~ 414 (472)
+++.+.+++++. .++ +.+++||+..| +.++||+++|+|+|+....++. ..+.+.|.|+.+ +.
T Consensus 263 ~~v~~~g~~~~~~~~~~~--~~ad~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~g~g~~v------~~-- 327 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVA--ARSYLMLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGIEAGTLKLA------GT-- 327 (375)
T ss_dssp TTEEEECCCCHHHHHHHH--HTCSEEEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHHHTTSEEEC------CS--
T ss_pred CCEEEeCCCCHHHHHHHH--HhCcEEEECCC-ChHHHHHhcCCCEEEecCCCCC----ceeecCCceEEc------CC--
Confidence 688887888765 556 55667998873 5588999999999998543443 234566888887 42
Q ss_pred cCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHH
Q 012061 415 AKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELIDK 464 (472)
Q Consensus 415 ~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 464 (472)
++++++++|.++++|++.+++ +++..++ ..++.+..+.++.+.+.
T Consensus 328 -d~~~la~~i~~ll~~~~~~~~---~~~~~~~-~~~~~~~~~i~~~~~~~ 372 (375)
T 3beo_A 328 -DEETIFSLADELLSDKEAHDK---MSKASNP-YGDGRASERIVEAILKH 372 (375)
T ss_dssp -CHHHHHHHHHHHHHCHHHHHH---HCCCCCT-TCCSCHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhChHhHhh---hhhcCCC-CCCCcHHHHHHHHHHHH
Confidence 889999999999999876643 3333333 23445555555555443
No 33
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.24 E-value=1.4e-08 Score=99.90 Aligned_cols=164 Identities=14% Similarity=0.068 Sum_probs=93.9
Q ss_pred eEEEeecccc-cC-CHHHHHHHHHHHHhC----CCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChH
Q 012061 276 VVYVSFGSRL-AL-SMEQTKELGDGLLSS----GCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQD 349 (472)
Q Consensus 276 ~v~vs~GS~~-~~-~~~~~~~~~~al~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~ 349 (472)
.+++..|+.. .. ..+.+.+.+..+.+. +.++ +++|. +... ....+ ..+.+... +++.+.+|+++.
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l-~i~G~----g~~~--~~~~l-~~~~~~~~-~~~~~~g~~~~~ 322 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRF-IIIGK----GDPE--LEGWA-RSLEEKHG-NVKVITEMLSRE 322 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEE-EEECC----CCHH--HHHHH-HHHHHHCT-TEEEECSCCCHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEE-EEEcC----CChh--HHHHH-HHHHhhcC-CEEEEcCCCCHH
Confidence 6777788876 33 456666666666552 3343 33443 1111 11111 11112222 455667899987
Q ss_pred H---HhcccCcCcEEee----cCcchHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHH
Q 012061 350 K---VLSHRAVGGFVSH----GGWNSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGL 422 (472)
Q Consensus 350 ~---ll~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~ 422 (472)
+ ++ .+++++|.- |-.++++||+++|+|+|+... ..... +.+.|.|..+ +. -+++++++
T Consensus 323 ~~~~~~--~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e-~~~~~~g~~~------~~--~d~~~la~ 387 (439)
T 3fro_A 323 FVRELY--GSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRD-IITNETGILV------KA--GDPGELAN 387 (439)
T ss_dssp HHHHHH--TTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHH-HCCTTTCEEE------CT--TCHHHHHH
T ss_pred HHHHHH--HHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcce-eEEcCceEEe------CC--CCHHHHHH
Confidence 4 45 455567743 334799999999999999753 33333 3335688888 43 37899999
Q ss_pred HHHHHhc-CHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHh
Q 012061 423 KIKDLMA-NDFLREQAKRIEEEARKAIGVGGSSERTFKELIDKWKC 467 (472)
Q Consensus 423 ~i~~~l~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 467 (472)
+|.++++ |++.+++..+-+ ++.. +.=+..+.++.+++-+.+
T Consensus 388 ~i~~ll~~~~~~~~~~~~~~---~~~~-~~~s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 388 AILKALELSRSDLSKFRENC---KKRA-MSFSWEKSAERYVKAYTG 429 (439)
T ss_dssp HHHHHHHHTTTTTHHHHHHH---HHHH-HTSCHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCHHHHHHHHHHH---HHHH-hhCcHHHHHHHHHHHHHH
Confidence 9999998 765443322222 2221 123556666666665554
No 34
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.14 E-value=8.5e-08 Score=93.77 Aligned_cols=111 Identities=13% Similarity=0.038 Sum_probs=73.9
Q ss_pred cCCceeccCCC---hH---HHhcccCcCcEEeec----CcchHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEee
Q 012061 337 DQGLVVKNWVD---QD---KVLSHRAVGGFVSHG----GWNSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRS 406 (472)
Q Consensus 337 ~~~~~~~~~~p---q~---~ll~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~ 406 (472)
.+++.+.+|++ +. .+++. ++++|.-. ..+++.||+++|+|+|+.+. ..+...++..+.|..+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~--ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~~~g~l~-- 363 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRA--SDVILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDGETGFLV-- 363 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHH--CSEEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBTTTEEEE--
T ss_pred CCcEEEecccCCCCHHHHHHHHHh--CCEEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecCCCeEEE--
Confidence 36888888765 33 55644 55577654 45689999999999999764 3455555555788888
Q ss_pred cCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHH-HHHHhccCCChHHHHHHHHHHHHh
Q 012061 407 WGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEE-ARKAIGVGGSSERTFKELIDKWKC 467 (472)
Q Consensus 407 ~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~-~~~~~~~~g~~~~~~~~~~~~~~~ 467 (472)
+ +.+++.++|.++++|++.+++..+-+.+ +.+ .=+..+.++.+++-+.+
T Consensus 364 ----~----d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~----~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 364 ----R----DANEAVEVVLYLLKHPEVSKEMGAKAKERVRK----NFIITKHMERYLDILNS 413 (416)
T ss_dssp ----S----SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH----HTBHHHHHHHHHHHHHT
T ss_pred ----C----CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH----HcCHHHHHHHHHHHHHH
Confidence 5 7899999999999998765443332222 221 12555666666665543
No 35
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.14 E-value=1.8e-08 Score=101.23 Aligned_cols=88 Identities=16% Similarity=0.105 Sum_probs=62.0
Q ss_pred cCCceeccCCChH---HHhcccCc--CcEEeec---C-cchHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEeec
Q 012061 337 DQGLVVKNWVDQD---KVLSHRAV--GGFVSHG---G-WNSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSW 407 (472)
Q Consensus 337 ~~~~~~~~~~pq~---~ll~~~~~--~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~ 407 (472)
.+++.+.+++|+. .+++.+.. +++|.-. | .++++||+++|+|+|+... ......+...+.|+.+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~~~g~l~--- 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGGKYGVLV--- 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGGTSSEEE---
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCCceEEEe---
Confidence 3678999999866 45644400 5577432 3 3689999999999999853 3344445555578888
Q ss_pred CCCCcCCcCHHHHHHHHHHHhcCHHHHHH
Q 012061 408 GWGTELRAKGDEIGLKIKDLMANDFLREQ 436 (472)
Q Consensus 408 ~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 436 (472)
+. -++++++++|.++++|++.+++
T Consensus 407 ---~~--~d~~~la~~i~~ll~~~~~~~~ 430 (499)
T 2r60_A 407 ---DP--EDPEDIARGLLKAFESEETWSA 430 (499)
T ss_dssp ---CT--TCHHHHHHHHHHHHSCHHHHHH
T ss_pred ---CC--CCHHHHHHHHHHHHhCHHHHHH
Confidence 43 3789999999999999875543
No 36
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.09 E-value=1.3e-09 Score=105.15 Aligned_cols=346 Identities=12% Similarity=0.099 Sum_probs=181.0
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCCCCCCCCCCChHHHH
Q 012061 13 VALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPFDPNSANATDPFLLR 92 (472)
Q Consensus 13 il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (472)
-+++-.+++-.+.-+-.|.++|.++ ++..++.+..+.+.. +.++... .+.+..+...-+ ..+...
T Consensus 11 ~~~~v~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~----~~~~~~~-----~~~i~~~~~~l~-~~~~~~---- 75 (385)
T 4hwg_A 11 KVMTIVGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYE----LNQVFFD-----DMGIRKPDYFLE-VAADNT---- 75 (385)
T ss_dssp EEEEEECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHH----HTHHHHC------CCCCCCSEECC-CCCCCS----
T ss_pred heeEEEEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChh----HHHHHHh-----hCCCCCCceecC-CCCCCH----
Confidence 3455578888888899999999887 888888776432210 1111100 011100000000 111222
Q ss_pred HHHHHHhHhhhhhhcC-CCCcEEEE--cCCChhhhHHHHHhcCCCeEEEeCccHHHHHHHhhhhhhhhccCCCCCCCCCC
Q 012061 93 WEAIRRSAHLLAPLLS-PPLSALIT--DVTLISAVLPVTINLHLPNYVLFTASAKMFSLTASFPAIVASKSTSSGSVEFD 169 (472)
Q Consensus 93 ~~~~~~~~~~~~~ll~-~~~D~vI~--D~~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 169 (472)
...+......+.++++ .+||+|++ |. ...++..+|+++|||++.+ .++
T Consensus 76 ~~~~~~~~~~l~~~l~~~kPD~Vlv~gd~-~~~~aalaA~~~~IPv~h~-eag--------------------------- 126 (385)
T 4hwg_A 76 AKSIGLVIEKVDEVLEKEKPDAVLFYGDT-NSCLSAIAAKRRKIPIFHM-EAG--------------------------- 126 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEEESCS-GGGGGHHHHHHTTCCEEEE-SCC---------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEECCc-hHHHHHHHHHHhCCCEEEE-eCC---------------------------
Confidence 2233334456677777 89999986 33 3335578899999996543 110
Q ss_pred CCceeCCCCCCCCCCCCCCCccCCchhHHHHHHHhcccccccceEEEcccccccHHHHHHHhcccccCCCC--CeeEecc
Q 012061 170 DDFIEIPGLPPIPLSSVPPAVMDSKSLFATSFLENGNSFVKSNGVLINSFDALEADTLVALNGRRVVAGLP--PVYAVGP 247 (472)
Q Consensus 170 ~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~p~~p--~v~~vGp 247 (472)
+.... ..+|. ...+..... -++.++..+-. ..+.+... +.+ +++.+|.
T Consensus 127 --------lrs~~-~~~pe-------e~nR~~~~~-----~a~~~~~~te~-----~~~~l~~~----G~~~~~I~vtGn 176 (385)
T 4hwg_A 127 --------NRCFD-QRVPE-------EINRKIIDH-----ISDVNITLTEH-----ARRYLIAE----GLPAELTFKSGS 176 (385)
T ss_dssp --------CCCSC-TTSTH-------HHHHHHHHH-----HCSEEEESSHH-----HHHHHHHT----TCCGGGEEECCC
T ss_pred --------Ccccc-ccCcH-------HHHHHHHHh-----hhceeecCCHH-----HHHHHHHc----CCCcCcEEEECC
Confidence 00000 00010 111222111 12333333311 11111111 233 5888885
Q ss_pred cCCCCccC----CCCCCccchhhhccCCCCCceEEEeecccccCC-HHHHHHHHHHHHhC----CCceEEEEeCCCCCcc
Q 012061 248 LLPCEFEK----RDDPSTSLILKWLDDQPEGSVVYVSFGSRLALS-MEQTKELGDGLLSS----GCRFLWVVKGKNVDKE 318 (472)
Q Consensus 248 l~~~~~~~----~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~-~~~~~~~~~al~~~----~~~~~~~~~~~~~~~~ 318 (472)
...+.... ....+ +.+.+.-.+ ++.|+++.|...+.. .+.+..+++++.+. +..+++.... .
T Consensus 177 p~~D~~~~~~~~~~~~~---~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p-----~ 247 (385)
T 4hwg_A 177 HMPEVLDRFMPKILKSD---ILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHP-----R 247 (385)
T ss_dssp SHHHHHHHHHHHHHHCC---HHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECH-----H
T ss_pred chHHHHHHhhhhcchhH---HHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECCh-----H
Confidence 43221100 00112 444444333 458888888753332 34566777777643 5666665432 1
Q ss_pred hhHHHHhhhhHHHHHHhh-cCCceeccCCChH---HHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCcccchhhHHH
Q 012061 319 DEESLKNVLGHELMEKIK-DQGLVVKNWVDQD---KVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFGDQKINAEA 394 (472)
Q Consensus 319 ~~~~~~~~~p~~~~~~~~-~~~~~~~~~~pq~---~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 394 (472)
..+.+.+. .++ .. .+++++.+.+++. .++++ ++++|+-.|. .+.||.++|+|+|+++...+.+.
T Consensus 248 ~~~~l~~~--~~~---~~~~~~v~l~~~lg~~~~~~l~~~--adlvvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---- 315 (385)
T 4hwg_A 248 TKKRLEDL--EGF---KELGDKIRFLPAFSFTDYVKLQMN--AFCILSDSGT-ITEEASILNLPALNIREAHERPE---- 315 (385)
T ss_dssp HHHHHHTS--GGG---GGTGGGEEECCCCCHHHHHHHHHH--CSEEEECCTT-HHHHHHHTTCCEEECSSSCSCTH----
T ss_pred HHHHHHHH--HHH---hcCCCCEEEEcCCCHHHHHHHHHh--CcEEEECCcc-HHHHHHHcCCCEEEcCCCccchh----
Confidence 11111110 000 11 2577776666543 67755 5569999876 46999999999999987554222
Q ss_pred HHhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh-ccCCChHHHHHHHHHHHH
Q 012061 395 VERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAI-GVGGSSERTFKELIDKWK 466 (472)
Q Consensus 395 v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~-~~~g~~~~~~~~~~~~~~ 466 (472)
.++.|.++.+ + .++++|.+++.++++|+..+++..+... .. ++|+++.++++.+.+.+.
T Consensus 316 ~v~~G~~~lv------~---~d~~~i~~ai~~ll~d~~~~~~m~~~~~----~~~g~g~aa~rI~~~l~~~~~ 375 (385)
T 4hwg_A 316 GMDAGTLIMS------G---FKAERVLQAVKTITEEHDNNKRTQGLVP----DYNEAGLVSKKILRIVLSYVD 375 (385)
T ss_dssp HHHHTCCEEC------C---SSHHHHHHHHHHHHTTCBTTBCCSCCCH----HHHTCCCHHHHHHHHHHHHHH
T ss_pred hhhcCceEEc------C---CCHHHHHHHHHHHHhChHHHHHhhccCC----CCCCCChHHHHHHHHHHHHhh
Confidence 3567887766 3 2789999999999988754322211111 25 788888888777766543
No 37
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.08 E-value=9.9e-09 Score=97.61 Aligned_cols=156 Identities=14% Similarity=0.100 Sum_probs=92.2
Q ss_pred EEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChH---HHhc
Q 012061 277 VYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQD---KVLS 353 (472)
Q Consensus 277 v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~---~ll~ 353 (472)
+++..|+.. ....+..++++++.++.++++ +|.. ...+.+.. +.+... +++.+.+|+++. .+++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i-~G~g----~~~~~l~~-----~~~~~~-~~v~~~g~~~~~~l~~~~~ 230 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVL-AGPA----WEPEYFDE-----ITRRYG-STVEPIGEVGGERRLDLLA 230 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEE-ESCC----CCHHHHHH-----HHHHHT-TTEEECCCCCHHHHHHHHH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEE-EeCc----ccHHHHHH-----HHHHhC-CCEEEeccCCHHHHHHHHH
Confidence 344467764 234455666777766766544 4431 22222222 112222 789999999976 6675
Q ss_pred ccCcCcEEee-------------cC-cchHHHHHHhCCcEEecCCcccchhhHHHHHh--hCeeeEEeecCCCCcCCcCH
Q 012061 354 HRAVGGFVSH-------------GG-WNSLVEAARHGVPLLVWPHFGDQKINAEAVER--AGLGMWVRSWGWGTELRAKG 417 (472)
Q Consensus 354 ~~~~~~~I~H-------------gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~--~G~G~~l~~~~~~~~~~~~~ 417 (472)
.+ +++|.- -| .++++||+++|+|+|+... ..+...++. -+.|+.+ + . +.
T Consensus 231 ~a--dv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~~~g~~~------~--~-d~ 295 (342)
T 2iuy_A 231 SA--HAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGEVVGYGT------D--F-AP 295 (342)
T ss_dssp HC--SEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEEECCSSS------C--C-CH
T ss_pred hC--CEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCCCceEEc------C--C-CH
Confidence 54 457732 33 3689999999999999865 335555555 4566666 3 2 88
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHhccCCChHHHHHHHHHHHHhcc
Q 012061 418 DEIGLKIKDLMANDFLREQAKRIE-EEARKAIGVGGSSERTFKELIDKWKCNN 469 (472)
Q Consensus 418 ~~l~~~i~~~l~~~~~~~~a~~l~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 469 (472)
+++.++|.++++ ++++++.. +.+.-. ...+.+.++++.+.+.+
T Consensus 296 ~~l~~~i~~l~~----~~~~~~~~~~~~s~~-----~~~~~~~~~~~~~~~~~ 339 (342)
T 2iuy_A 296 DEARRTLAGLPA----SDEVRRAAVRLWGHV-----TIAERYVEQYRRLLAGA 339 (342)
T ss_dssp HHHHHHHHTSCC----HHHHHHHHHHHHBHH-----HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHccC
Confidence 999999999987 45555544 222211 23334445555555443
No 38
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.06 E-value=2.1e-07 Score=90.27 Aligned_cols=112 Identities=14% Similarity=0.089 Sum_probs=70.4
Q ss_pred CCceeccCCCh-HHHhcccCcCcEE----eecCcchHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEeecCCCCc
Q 012061 338 QGLVVKNWVDQ-DKVLSHRAVGGFV----SHGGWNSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTE 412 (472)
Q Consensus 338 ~~~~~~~~~pq-~~ll~~~~~~~~I----~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~ 412 (472)
+++.+.++.++ ..+++. ++++| .-|..+++.||+++|+|+|+.+..+ ....+++.+.|..+ +.
T Consensus 267 ~~v~~~g~~~~~~~~~~~--adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v~~~~~g~~~------~~ 334 (394)
T 2jjm_A 267 DRVLFLGKQDNVAELLAM--SDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVIQHGDTGYLC------EV 334 (394)
T ss_dssp GGBCCCBSCSCTHHHHHT--CSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTCCBTTTEEEE------CT
T ss_pred CeEEEeCchhhHHHHHHh--CCEEEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHhhcCCceEEe------CC
Confidence 57777777543 367744 55688 4556679999999999999987532 22233334578887 43
Q ss_pred CCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHH
Q 012061 413 LRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELIDKWK 466 (472)
Q Consensus 413 ~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (472)
-+.+++.++|.++++|++.+++..+-+.+.. .+.=+..+.++.+++.+.
T Consensus 335 --~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~---~~~~s~~~~~~~~~~~~~ 383 (394)
T 2jjm_A 335 --GDTTGVADQAIQLLKDEELHRNMGERARESV---YEQFRSEKIVSQYETIYY 383 (394)
T ss_dssp --TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH---HHHSCHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH---HHhCCHHHHHHHHHHHHH
Confidence 2789999999999998875543322222211 112355555555555444
No 39
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.05 E-value=3.5e-07 Score=87.78 Aligned_cols=163 Identities=15% Similarity=0.132 Sum_probs=97.3
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHHhCCC----c-eEEEEeCCCCCcchhHHHHhhhhHHHHHHhh-cCCceeccCCCh
Q 012061 275 SVVYVSFGSRLALSMEQTKELGDGLLSSGC----R-FLWVVKGKNVDKEDEESLKNVLGHELMEKIK-DQGLVVKNWVDQ 348 (472)
Q Consensus 275 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~pq 348 (472)
..+++..|+... ...+..+++++..... . -++++|.. . .+.+.. +..... .+++.+.++.++
T Consensus 196 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g----~-~~~~~~-----~~~~~~~~~~v~~~g~~~~ 263 (374)
T 2iw1_A 196 QNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQD----K-PRKFEA-----LAEKLGVRSNVHFFSGRND 263 (374)
T ss_dssp CEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSS----C-CHHHHH-----HHHHHTCGGGEEEESCCSC
T ss_pred CeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCC----C-HHHHHH-----HHHHcCCCCcEEECCCccc
Confidence 356677787642 2334556666665422 1 34455541 1 122221 111111 367888888654
Q ss_pred -HHHhcccCcCcEEe----ecCcchHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHH
Q 012061 349 -DKVLSHRAVGGFVS----HGGWNSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLK 423 (472)
Q Consensus 349 -~~ll~~~~~~~~I~----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~ 423 (472)
..+++. ++++|. -|..+++.||+++|+|+|+.+. ..+...+++.+.|..+ +. .-+.+++.++
T Consensus 264 ~~~~~~~--ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~~~g~~~------~~-~~~~~~l~~~ 330 (374)
T 2iw1_A 264 VSELMAA--ADLLLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADANCGTVI------AE-PFSQEQLNEV 330 (374)
T ss_dssp HHHHHHH--CSEEEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHHTCEEEE------CS-SCCHHHHHHH
T ss_pred HHHHHHh--cCEEEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccCCceEEe------CC-CCCHHHHHHH
Confidence 367755 445776 4566889999999999999765 3456677777899998 41 2378999999
Q ss_pred HHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHH
Q 012061 424 IKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELID 463 (472)
Q Consensus 424 i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 463 (472)
|.++++|++.+++..+-+.+..+.. .-.+..+.+.++++
T Consensus 331 i~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 369 (374)
T 2iw1_A 331 LRKALTQSPLRMAWAENARHYADTQ-DLYSLPEKAADIIT 369 (374)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHS-CCSCHHHHHHHHHH
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHH
Confidence 9999999876654444443333221 12344444444444
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.71 E-value=7.8e-06 Score=81.47 Aligned_cols=161 Identities=15% Similarity=0.081 Sum_probs=89.1
Q ss_pred eEEEeecccccC-CHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCce-eccCCChH---H
Q 012061 276 VVYVSFGSRLAL-SMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLV-VKNWVDQD---K 350 (472)
Q Consensus 276 ~v~vs~GS~~~~-~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~pq~---~ 350 (472)
.+++..|..... ..+.+.+.+..+.+.+.+++ ++|.. .....+.+.. +.... .+++. +.++ +.+ .
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~-ivG~g--~~~~~~~l~~-----~~~~~-~~~v~~~~g~-~~~~~~~ 361 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLV-VLGAG--DVALEGALLA-----AASRH-HGRVGVAIGY-NEPLSHL 361 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEE-EEECB--CHHHHHHHHH-----HHHHT-TTTEEEEESC-CHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEE-EEeCC--chHHHHHHHH-----HHHhC-CCcEEEecCC-CHHHHHH
Confidence 467778887432 24444444444444455554 44441 0001111111 11111 25776 5678 544 4
Q ss_pred HhcccCcCcEEee----cCcchHHHHHHhCCcEEecCCcccchhhHHHHHhh---------CeeeEEeecCCCCcCCcCH
Q 012061 351 VLSHRAVGGFVSH----GGWNSLVEAARHGVPLLVWPHFGDQKINAEAVERA---------GLGMWVRSWGWGTELRAKG 417 (472)
Q Consensus 351 ll~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~---------G~G~~l~~~~~~~~~~~~~ 417 (472)
+++ .++++|.- |-.++++||+++|+|+|+... ......+... +.|..+ +. -++
T Consensus 362 ~~~--~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~------~~--~d~ 427 (485)
T 1rzu_A 362 MQA--GCDAIIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVIDANHAALASKAATGVQF------SP--VTL 427 (485)
T ss_dssp HHH--HCSEEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEE------SS--CSH
T ss_pred HHh--cCCEEEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecccccccccccCCcceEe------CC--CCH
Confidence 564 45557743 334689999999999999754 2333444433 578888 43 368
Q ss_pred HHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHH
Q 012061 418 DEIGLKIKDLM---ANDFLREQAKRIEEEARKAIGVGGSSERTFKELIDKWK 466 (472)
Q Consensus 418 ~~l~~~i~~~l---~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (472)
++++++|.+++ +|++.+++.. +..++ ..=+-++.++.+++-+.
T Consensus 428 ~~la~~i~~ll~~~~~~~~~~~~~---~~~~~---~~fs~~~~~~~~~~~y~ 473 (485)
T 1rzu_A 428 DGLKQAIRRTVRYYHDPKLWTQMQ---KLGMK---SDVSWEKSAGLYAALYS 473 (485)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHH---HHHHT---CCCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHH---HHHHH---HhCChHHHHHHHHHHHH
Confidence 99999999999 7886654333 22221 23344455555554433
No 41
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.69 E-value=5.9e-06 Score=86.46 Aligned_cols=88 Identities=16% Similarity=0.150 Sum_probs=58.2
Q ss_pred cCCceeccCCC----hHHHhcc-c-CcCcEEee----cCcchHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEee
Q 012061 337 DQGLVVKNWVD----QDKVLSH-R-AVGGFVSH----GGWNSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRS 406 (472)
Q Consensus 337 ~~~~~~~~~~p----q~~ll~~-~-~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~ 406 (472)
.+++.+.++.+ +.++... . ++++||.- |-..++.||+++|+|+|+.. -......+...+.|+.+
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV~dg~~Gllv-- 712 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVHGKSGFHI-- 712 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHCCBTTTBEEE--
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHHccCCcEEEe--
Confidence 36777777554 4544431 1 34557743 33469999999999999963 44444555555678888
Q ss_pred cCCCCcCCcCHHHHHHHHHHHh----cCHHHHHH
Q 012061 407 WGWGTELRAKGDEIGLKIKDLM----ANDFLREQ 436 (472)
Q Consensus 407 ~~~~~~~~~~~~~l~~~i~~~l----~~~~~~~~ 436 (472)
+. -++++++++|.+++ .|++.+++
T Consensus 713 ----~p--~D~e~LA~aI~~lL~~Ll~d~~~~~~ 740 (816)
T 3s28_A 713 ----DP--YHGDQAADTLADFFTKCKEDPSHWDE 740 (816)
T ss_dssp ----CT--TSHHHHHHHHHHHHHHHHHCTHHHHH
T ss_pred ----CC--CCHHHHHHHHHHHHHHhccCHHHHHH
Confidence 43 26889999997766 78765543
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.65 E-value=3.8e-05 Score=76.42 Aligned_cols=112 Identities=11% Similarity=0.011 Sum_probs=70.2
Q ss_pred CCce-eccCCChH---HHhcccCcCcEEee----cCcchHHHHHHhCCcEEecCCcccchhhHHHHHhh---------Ce
Q 012061 338 QGLV-VKNWVDQD---KVLSHRAVGGFVSH----GGWNSLVEAARHGVPLLVWPHFGDQKINAEAVERA---------GL 400 (472)
Q Consensus 338 ~~~~-~~~~~pq~---~ll~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~---------G~ 400 (472)
+++. +.++ +.+ .+++. ++++|.- |..++++||+++|+|+|+... ..+...+... +.
T Consensus 347 ~~v~~~~g~-~~~~~~~~~~~--adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~ 419 (485)
T 2qzs_A 347 GQVGVQIGY-HEAFSHRIMGG--ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSDCSLENLADGVAS 419 (485)
T ss_dssp TTEEEEESC-CHHHHHHHHHH--CSEEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCC
T ss_pred CcEEEeCCC-CHHHHHHHHHh--CCEEEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceeccCccccccccccc
Confidence 5675 6678 544 45644 5557743 334688999999999999854 2333334433 57
Q ss_pred eeEEeecCCCCcCCcCHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHhccC
Q 012061 401 GMWVRSWGWGTELRAKGDEIGLKIKDLM---ANDFLREQAKRIEEEARKAIGVGGSSERTFKELIDKWKCNNN 470 (472)
Q Consensus 401 G~~l~~~~~~~~~~~~~~~l~~~i~~~l---~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 470 (472)
|..+ +. -++++++++|.+++ +|++.+++..+ ..++ ..=+-.+.++.+++-+.+...
T Consensus 420 G~l~------~~--~d~~~la~~i~~ll~~~~~~~~~~~~~~---~~~~---~~fs~~~~~~~~~~ly~~~~~ 478 (485)
T 2qzs_A 420 GFVF------ED--SNAWSLLRAIRRAFVLWSRPSLWRFVQR---QAMA---MDFSWQVAAKSYRELYYRLKL 478 (485)
T ss_dssp BEEE------CS--SSHHHHHHHHHHHHHHHTSHHHHHHHHH---HHHH---CCCCHHHHHHHHHHHHHHHC-
T ss_pred eEEE------CC--CCHHHHHHHHHHHHHHcCCHHHHHHHHH---HHHh---hcCCHHHHHHHHHHHHHHhhh
Confidence 8888 43 36899999999999 68876544332 2222 234555666666665554433
No 43
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.58 E-value=1.9e-05 Score=76.73 Aligned_cols=108 Identities=11% Similarity=0.122 Sum_probs=65.2
Q ss_pred ceeccCCChH---HHhcccCcCcEEee----cCcchHHHHHHhCCcEEecCCcccchhhHHHHHhhCe------------
Q 012061 340 LVVKNWVDQD---KVLSHRAVGGFVSH----GGWNSLVEAARHGVPLLVWPHFGDQKINAEAVERAGL------------ 400 (472)
Q Consensus 340 ~~~~~~~pq~---~ll~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~------------ 400 (472)
+.+.+|+++. .+++. ++++|.- |...+++||+++|+|+|+... ......+ ..|.
T Consensus 256 v~~~g~~~~~~~~~~~~~--adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~~~i~~~~~~~~ 328 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNA--CDVIVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYF-SGDCVYKIKPSAWISV 328 (413)
T ss_dssp EEECSCCCHHHHHHHHHH--CSEEEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHS-CTTTSEEECCCEEEEC
T ss_pred eeccCcCCHHHHHHHHHh--CCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHH-ccCccccccccccccc
Confidence 6667999965 45644 4557742 233589999999999999653 2333333 2232
Q ss_pred ----ee--EEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHH
Q 012061 401 ----GM--WVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELIDKWK 466 (472)
Q Consensus 401 ----G~--~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (472)
|+ .+ +. -++++++++| ++++|++.+++. ++..++.+.+.=+-++.++.+++-+.
T Consensus 329 ~~~~G~~gl~------~~--~d~~~la~~i-~l~~~~~~~~~~---~~~a~~~~~~~fs~~~~~~~~~~~~~ 388 (413)
T 3oy2_A 329 DDRDGIGGIE------GI--IDVDDLVEAF-TFFKDEKNRKEY---GKRVQDFVKTKPTWDDISSDIIDFFN 388 (413)
T ss_dssp TTTCSSCCEE------EE--CCHHHHHHHH-HHTTSHHHHHHH---HHHHHHHHTTSCCHHHHHHHHHHHHH
T ss_pred ccccCcceee------CC--CCHHHHHHHH-HHhcCHHHHHHH---HHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 44 55 22 2889999999 999998766433 33333322233355555555554444
No 44
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.39 E-value=2.8e-06 Score=72.27 Aligned_cols=143 Identities=15% Similarity=0.103 Sum_probs=87.4
Q ss_pred eEEEeecccccCCHHHHHHHHHHHHhC-CCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCCh---HHH
Q 012061 276 VVYVSFGSRLALSMEQTKELGDGLLSS-GCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQ---DKV 351 (472)
Q Consensus 276 ~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq---~~l 351 (472)
.+++..|+... ...+..+++++... +.++++ +|.. ...+.+.... ... +.--.+++.+.+|+++ ..+
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i-~G~~----~~~~~l~~~~-~~~-~~~l~~~v~~~g~~~~~e~~~~ 94 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYI-VGWF----SKGDHAERYA-RKI-MKIAPDNVKFLGSVSEEELIDL 94 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEE-EBCC----CTTSTHHHHH-HHH-HHHSCTTEEEEESCCHHHHHHH
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEE-EecC----ccHHHHHHHH-Hhh-hcccCCcEEEeCCCCHHHHHHH
Confidence 34556677642 33456667777765 455544 4431 1111222211 000 0001368999999998 366
Q ss_pred hcccCcCcEEe---ecCc-chHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHHHHHH
Q 012061 352 LSHRAVGGFVS---HGGW-NSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLKIKDL 427 (472)
Q Consensus 352 l~~~~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~ 427 (472)
++. ++++|. +.|+ .+++||+++|+|+|+... ..+...+++.+.|..+ . -+.+++.++|.++
T Consensus 95 ~~~--adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~~~g~~~------~---~d~~~l~~~i~~l 159 (177)
T 2f9f_A 95 YSR--CKGLLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINEKTGYLV------N---ADVNEIIDAMKKV 159 (177)
T ss_dssp HHH--CSEEEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBTTTEEEE------C---SCHHHHHHHHHHH
T ss_pred HHh--CCEEEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCCCccEEe------C---CCHHHHHHHHHHH
Confidence 755 445776 3344 499999999999999753 4455555555677666 1 3789999999999
Q ss_pred hcCHHH-HHHHHHHHH
Q 012061 428 MANDFL-REQAKRIEE 442 (472)
Q Consensus 428 l~~~~~-~~~a~~l~~ 442 (472)
++|++. ++++++.++
T Consensus 160 ~~~~~~~~~~~~~~a~ 175 (177)
T 2f9f_A 160 SKNPDKFKKDCFRRAK 175 (177)
T ss_dssp HHCTTTTHHHHHHHHH
T ss_pred HhCHHHHHHHHHHHHh
Confidence 988765 666655544
No 45
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.23 E-value=0.00017 Score=69.91 Aligned_cols=75 Identities=11% Similarity=0.060 Sum_probs=56.2
Q ss_pred CCceeccCCChH---HHhcccCcCcEEe---ecCc-chHHHHH-------HhCCcEEecCCcccchhhHHHHHhhCeeeE
Q 012061 338 QGLVVKNWVDQD---KVLSHRAVGGFVS---HGGW-NSLVEAA-------RHGVPLLVWPHFGDQKINAEAVERAGLGMW 403 (472)
Q Consensus 338 ~~~~~~~~~pq~---~ll~~~~~~~~I~---HgG~-~s~~eal-------~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~ 403 (472)
+++.+.+++|+. .++ .+++++|. .-|. ++++||+ ++|+|+|+... +.....|..
T Consensus 265 ~~V~f~G~~~~~~l~~~~--~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~~~G~l 332 (406)
T 2hy7_A 265 DNVIVYGEMKHAQTIGYI--KHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGPYKSRF 332 (406)
T ss_dssp TTEEEECCCCHHHHHHHH--HTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCSCSSEE
T ss_pred CCEEEcCCCCHHHHHHHH--HhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccCcceEE
Confidence 788999999976 455 44555774 3344 5789999 99999999865 444456777
Q ss_pred -EeecCCCCcCCcCHHHHHHHHHHHhcCHH
Q 012061 404 -VRSWGWGTELRAKGDEIGLKIKDLMANDF 432 (472)
Q Consensus 404 -l~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 432 (472)
+ +. -++++++++|.++++|++
T Consensus 333 ~v------~~--~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 333 GY------TP--GNADSVIAAITQALEAPR 354 (406)
T ss_dssp EE------CT--TCHHHHHHHHHHHHHCCC
T ss_pred Ee------CC--CCHHHHHHHHHHHHhCcc
Confidence 7 43 278999999999998775
No 46
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.20 E-value=0.001 Score=63.66 Aligned_cols=92 Identities=17% Similarity=0.227 Sum_probs=63.2
Q ss_pred CceeccCCCh-HHHhcccCcCcEEee-----cCcchHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEeecCCCCc
Q 012061 339 GLVVKNWVDQ-DKVLSHRAVGGFVSH-----GGWNSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTE 412 (472)
Q Consensus 339 ~~~~~~~~pq-~~ll~~~~~~~~I~H-----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~ 412 (472)
++.+.++... ..+++. +++++.- +|..+++||+++|+|+|+-|..++.......+.+.|.++.. +
T Consensus 261 ~v~~~~~~~dl~~~y~~--aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~------~- 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPV--GKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEV------K- 331 (374)
T ss_dssp SEEECCSSSCHHHHGGG--EEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEEC------C-
T ss_pred cEEEECCHHHHHHHHHh--CCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEe------C-
Confidence 3455454443 366644 5555541 24478999999999999888777777766666667877666 2
Q ss_pred CCcCHHHHHHHHHHHhcCHH----HHHHHHHHHHH
Q 012061 413 LRAKGDEIGLKIKDLMANDF----LREQAKRIEEE 443 (472)
Q Consensus 413 ~~~~~~~l~~~i~~~l~~~~----~~~~a~~l~~~ 443 (472)
++++|+++|.++++| + +.+++++..+.
T Consensus 332 ---d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 332 ---NETELVTKLTELLSV-KKEIKVEEKSREIKGC 362 (374)
T ss_dssp ---SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHh
Confidence 679999999999987 5 45555555444
No 47
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.02 E-value=0.00025 Score=72.05 Aligned_cols=114 Identities=11% Similarity=-0.004 Sum_probs=73.8
Q ss_pred CCceeccCCChH---HHhcccCcCcEEe---ecCcchHHHHHHhCCcEEecCCcccch-hhHHHHHhhCeeeEEeecCCC
Q 012061 338 QGLVVKNWVDQD---KVLSHRAVGGFVS---HGGWNSLVEAARHGVPLLVWPHFGDQK-INAEAVERAGLGMWVRSWGWG 410 (472)
Q Consensus 338 ~~~~~~~~~pq~---~ll~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ~-~na~~v~~~G~G~~l~~~~~~ 410 (472)
++|++.+++++. .++. .+++||. .|+.++++||+++|+|+|++|-..=.. .-+..+.+.|+.-.+
T Consensus 434 ~~v~~~g~~~~~~~~~~~~--~adv~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v------ 505 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYR--HADLFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMN------ 505 (568)
T ss_dssp GGEEEECCCCHHHHHHHGG--GCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGB------
T ss_pred hHEEeeCCCCHHHHHHHHh--cCCEEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhh------
Confidence 678889999855 4464 4555772 256678999999999999977431111 123456666877666
Q ss_pred CcCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh--ccCCChHHHHHHHHHHH
Q 012061 411 TELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAI--GVGGSSERTFKELIDKW 465 (472)
Q Consensus 411 ~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~--~~~g~~~~~~~~~~~~~ 465 (472)
.. +++++.+++.++++|++.+++.. +..++.+ ...-+....++.+.+-+
T Consensus 506 ~~---~~~~la~~i~~l~~~~~~~~~~~---~~~~~~~~~~~~f~~~~~~~~~~~~y 556 (568)
T 2vsy_A 506 VA---DDAAFVAKAVALASDPAALTALH---ARVDVLRRASGVFHMDGFADDFGALL 556 (568)
T ss_dssp CS---SHHHHHHHHHHHHHCHHHHHHHH---HHHHHHHHHSSTTCHHHHHHHHHHHH
T ss_pred cC---CHHHHHHHHHHHhcCHHHHHHHH---HHHHHhhhcCCCCCHHHHHHHHHHHH
Confidence 32 88999999999999987665433 3333322 23345555555554443
No 48
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.81 E-value=0.00086 Score=57.65 Aligned_cols=83 Identities=11% Similarity=0.042 Sum_probs=60.9
Q ss_pred Ccee-ccCCChH---HHhcccCcCcEEeec---C-cchHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEeecCCC
Q 012061 339 GLVV-KNWVDQD---KVLSHRAVGGFVSHG---G-WNSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWG 410 (472)
Q Consensus 339 ~~~~-~~~~pq~---~ll~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~ 410 (472)
++.+ .+++++. .++ ..++++|.-. | ..+++||+++|+|+|+... ......+ ..+.|..+
T Consensus 96 ~v~~~~g~~~~~~~~~~~--~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~~~g~~~------ 162 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELY--GSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TNETGILV------ 162 (200)
T ss_dssp TEEEECSCCCHHHHHHHH--TTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CTTTCEEE------
T ss_pred CEEEEeccCCHHHHHHHH--HHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CCCceEEe------
Confidence 8888 9999955 556 4455677543 3 4688999999999999753 3444445 55678887
Q ss_pred CcCCcCHHHHHHHHHHHhc-CHHHHHH
Q 012061 411 TELRAKGDEIGLKIKDLMA-NDFLREQ 436 (472)
Q Consensus 411 ~~~~~~~~~l~~~i~~~l~-~~~~~~~ 436 (472)
+. -+.+++.++|.++++ |++.+++
T Consensus 163 ~~--~~~~~l~~~i~~l~~~~~~~~~~ 187 (200)
T 2bfw_A 163 KA--GDPGELANAILKALELSRSDLSK 187 (200)
T ss_dssp CT--TCHHHHHHHHHHHHHCCHHHHHH
T ss_pred cC--CCHHHHHHHHHHHHhcCHHHHHH
Confidence 43 278999999999999 9875543
No 49
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.72 E-value=0.00057 Score=56.84 Aligned_cols=136 Identities=15% Similarity=0.174 Sum_probs=75.1
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHHhCC--Cce-EEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChH--
Q 012061 275 SVVYVSFGSRLALSMEQTKELGDGLLSSG--CRF-LWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQD-- 349 (472)
Q Consensus 275 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~-- 349 (472)
+++++..|+... ...+..+++++..+. .++ ++++|. +...+.+.... +.. ..++.+ +|+|+.
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~----g~~~~~~~~~~-----~~~-~~~v~~-g~~~~~~~ 68 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGK----GPDEKKIKLLA-----QKL-GVKAEF-GFVNSNEL 68 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECC----STTHHHHHHHH-----HHH-TCEEEC-CCCCHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeC----CccHHHHHHHH-----HHc-CCeEEE-eecCHHHH
Confidence 367777888743 333455666665542 123 333443 12222222211 111 136777 999876
Q ss_pred -HHhcccCcCcEEee----cCcchHHHHHHhCC-cEEecCCcccchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHH
Q 012061 350 -KVLSHRAVGGFVSH----GGWNSLVEAARHGV-PLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLK 423 (472)
Q Consensus 350 -~ll~~~~~~~~I~H----gG~~s~~eal~~Gv-P~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~ 423 (472)
.++ ..++++|.- |...++.||+++|+ |+|+....+.- ...+...+. .+ +. -+.+++.++
T Consensus 69 ~~~~--~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~---~~~~~~~~~--~~------~~--~~~~~l~~~ 133 (166)
T 3qhp_A 69 LEIL--KTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSAT---RQFALDERS--LF------EP--NNAKDLSAK 133 (166)
T ss_dssp HHHH--TTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGG---GGGCSSGGG--EE------CT--TCHHHHHHH
T ss_pred HHHH--HhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCch---hhhccCCce--EE------cC--CCHHHHHHH
Confidence 455 445667762 33469999999996 99994321111 111111122 34 22 378999999
Q ss_pred HHHHhcCHHHHHHHH
Q 012061 424 IKDLMANDFLREQAK 438 (472)
Q Consensus 424 i~~~l~~~~~~~~a~ 438 (472)
|.++++|++.+++..
T Consensus 134 i~~l~~~~~~~~~~~ 148 (166)
T 3qhp_A 134 IDWWLENKLERERMQ 148 (166)
T ss_dssp HHHHHHCHHHHHHHH
T ss_pred HHHHHhCHHHHHHHH
Confidence 999999887554433
No 50
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.59 E-value=0.0037 Score=65.09 Aligned_cols=148 Identities=12% Similarity=0.187 Sum_probs=98.9
Q ss_pred CCCceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHH-HhhcCCceeccCCChHH
Q 012061 272 PEGSVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELME-KIKDQGLVVKNWVDQDK 350 (472)
Q Consensus 272 ~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~pq~~ 350 (472)
++..+||.||-+..-.+++.+....+-|++.+--.+|..... ...... +-..+.. .+..+.+++.+..|..+
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~---~~~~~~----l~~~~~~~gi~~~r~~f~~~~~~~~ 592 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFP---AVGEPN----IQQYAQNMGLPQNRIIFSPVAPKEE 592 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETT---GGGHHH----HHHHHHHTTCCGGGEEEEECCCHHH
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCc---HHHHHH----HHHHHHhcCCCcCeEEECCCCCHHH
Confidence 344599999999988899999999999999888899998762 111111 2122211 23346678888888764
Q ss_pred Hh-cccCcCcEEe---ecCcchHHHHHHhCCcEEecCCcccch---hhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHH
Q 012061 351 VL-SHRAVGGFVS---HGGWNSLVEAARHGVPLLVWPHFGDQK---INAEAVERAGLGMWVRSWGWGTELRAKGDEIGLK 423 (472)
Q Consensus 351 ll-~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ~---~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~ 423 (472)
-| .+..++.++- .+|.+|++|||+.|||+|+++ ++++ .-+..+...|+.-.+ .-+.++-.+.
T Consensus 593 ~l~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~--g~~~~sR~~~s~l~~~gl~e~i---------a~~~~~Y~~~ 661 (723)
T 4gyw_A 593 HVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMP--GETLASRVAASQLTCLGCLELI---------AKNRQEYEDI 661 (723)
T ss_dssp HHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCC--CSSGGGTHHHHHHHHHTCGGGB---------CSSHHHHHHH
T ss_pred HHHHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEcc--CCCccHhHHHHHHHHcCCcccc---------cCCHHHHHHH
Confidence 44 3355667875 789999999999999999998 3332 223334555776544 2356665555
Q ss_pred HHHHhcCHHHHHHH
Q 012061 424 IKDLMANDFLREQA 437 (472)
Q Consensus 424 i~~~l~~~~~~~~a 437 (472)
..++-+|++.+++.
T Consensus 662 a~~la~d~~~l~~l 675 (723)
T 4gyw_A 662 AVKLGTDLEYLKKV 675 (723)
T ss_dssp HHHHHHCHHHHHHH
T ss_pred HHHHhcCHHHHHHH
Confidence 55676787766443
No 51
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.55 E-value=0.0021 Score=64.32 Aligned_cols=148 Identities=12% Similarity=0.076 Sum_probs=93.8
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEE--eCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHh
Q 012061 275 SVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVV--KGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVL 352 (472)
Q Consensus 275 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll 352 (472)
.++|.+|+......++.+....+-+++.+..++|.. +.. .+......... ....+. +.+++.+.+|..+.+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~--~g~~~~~~~~~----~~~GI~-~Rv~F~g~~p~~e~l 513 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQS--NGITHPYVERF----IKSYLG-DSATAHPHSPYHQYL 513 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSC--CGGGHHHHHHH----HHHHHG-GGEEEECCCCHHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC--chhhHHHHHHH----HHcCCC-ccEEEcCCCCHHHHH
Confidence 589999998877789999988888888877777753 321 11111111111 111222 466788999877544
Q ss_pred -cccCcCcEEe---ecCcchHHHHHHhCCcEEecCCcccc-hhhHHHHHhhCeeeE-EeecCCCCcCCcCHHHHHHHHHH
Q 012061 353 -SHRAVGGFVS---HGGWNSLVEAARHGVPLLVWPHFGDQ-KINAEAVERAGLGMW-VRSWGWGTELRAKGDEIGLKIKD 426 (472)
Q Consensus 353 -~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ-~~na~~v~~~G~G~~-l~~~~~~~~~~~~~~~l~~~i~~ 426 (472)
.+..+++|+. .+|.+|++||+++|||+|+++-..=. ..-+..+...|+.-. + .-+.++..+...+
T Consensus 514 a~y~~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LI---------A~d~eeYv~~Av~ 584 (631)
T 3q3e_A 514 RILHNCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLI---------ANTVDEYVERAVR 584 (631)
T ss_dssp HHHHTCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGE---------ESSHHHHHHHHHH
T ss_pred HHHhcCcEEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCccee---------cCCHHHHHHHHHH
Confidence 2245556664 37889999999999999999732111 111223445677542 3 1267888888888
Q ss_pred HhcCHHHHHHHH
Q 012061 427 LMANDFLREQAK 438 (472)
Q Consensus 427 ~l~~~~~~~~a~ 438 (472)
+.+|++.+++.+
T Consensus 585 La~D~~~l~~LR 596 (631)
T 3q3e_A 585 LAENHQERLELR 596 (631)
T ss_dssp HHHCHHHHHHHH
T ss_pred HhCCHHHHHHHH
Confidence 999998765443
No 52
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.11 E-value=0.00078 Score=63.26 Aligned_cols=110 Identities=23% Similarity=0.235 Sum_probs=75.5
Q ss_pred CCceeccCCChHHHh---cccCcCcEEeecCc---------chHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEe
Q 012061 338 QGLVVKNWVDQDKVL---SHRAVGGFVSHGGW---------NSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVR 405 (472)
Q Consensus 338 ~~~~~~~~~pq~~ll---~~~~~~~~I~HgG~---------~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~ 405 (472)
.|+.+.+|+|+.++. +.++.+++.+-+.+ +-+.|++++|+|+|+.+ ...++..+++.|+|+.+
T Consensus 214 ~nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~~~G~~~- 288 (339)
T 3rhz_A 214 QNVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENNGLGWIV- 288 (339)
T ss_dssp TTEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHHTCEEEE-
T ss_pred CCEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhCCeEEEe-
Confidence 489999999998654 33344334322222 34789999999999864 56788889999999999
Q ss_pred ecCCCCcCCcCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHH
Q 012061 406 SWGWGTELRAKGDEIGLKIKDLMAN--DFLREQAKRIEEEARKAIGVGGSSERTFKELIDKW 465 (472)
Q Consensus 406 ~~~~~~~~~~~~~~l~~~i~~~l~~--~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 465 (472)
+ +.+++.+++..+..+ .++++|+++.+++++. |--..+.+.+.+.++
T Consensus 289 -----~----~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 289 -----K----DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp -----S----SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred -----C----CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 4 368888888876532 2466777777776543 445555555555544
No 53
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.98 E-value=0.023 Score=53.35 Aligned_cols=104 Identities=13% Similarity=0.038 Sum_probs=62.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCCCCCCCCCCCh
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQH--HCRVTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPFDPNSANATDP 88 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (472)
|||+++...+.|++.=...+.+.|+++ +.+|++++.+.+.+.+ ...|.++.+ . ..+.... ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~---------~~~p~i~~v--~--~~~~~~~--~~~ 65 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLL---------SRMPEVNEA--I--PMPLGHG--ALE 65 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHH---------TTCTTEEEE--E--EC---------C
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHH---------hcCCccCEE--E--EecCCcc--ccc
Confidence 689999999999999999999999986 9999999987443332 223322111 1 1111000 000
Q ss_pred HHHHHHHHHHhHhhhhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEEE
Q 012061 89 FLLRWEAIRRSAHLLAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYVL 138 (472)
Q Consensus 89 ~~~~~~~~~~~~~~~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~ 138 (472)
+. ....+.+.++ .+||++|.-. ...-...++...|+|..+.
T Consensus 66 ~~--------~~~~l~~~l~~~~~D~vid~~-~~~~sa~~~~~~~~~~~ig 107 (348)
T 1psw_A 66 IG--------ERRKLGHSLREKRYDRAYVLP-NSFKSALVPLFAGIPHRTG 107 (348)
T ss_dssp HH--------HHHHHHHHTTTTTCSEEEECS-CCSGGGHHHHHTTCSEEEE
T ss_pred hH--------HHHHHHHHHHhcCCCEEEECC-CChHHHHHHHHhCCCEEec
Confidence 11 1112333445 6899999333 3345567788889997443
No 54
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.64 E-value=0.17 Score=47.42 Aligned_cols=107 Identities=10% Similarity=0.013 Sum_probs=67.2
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCCCCCCCCC
Q 012061 8 DSHPHVALIPSAGMGHLTPFLRLAASLVQH--HCRVTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPFDPNSANA 85 (472)
Q Consensus 8 ~~~~~il~~~~~~~GHi~P~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (472)
-+.++|+++-..+.|++.-...+.+.|+++ +.+|++++.+.+.+.++. .|.++.+ +.+ +.
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~---------~p~vd~v-i~~---~~----- 67 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY---------NPNIDEL-IVV---DK----- 67 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS---------CTTCSEE-EEE---CC-----
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc---------CCCccEE-EEe---Cc-----
Confidence 345699999999999999999999999996 999999998865544443 3333222 111 11
Q ss_pred CChHHHHHHHHHHhHhhhhhhcC-CCC-cEEEEcCCChhhhHHHHHhcCCCeEEE
Q 012061 86 TDPFLLRWEAIRRSAHLLAPLLS-PPL-SALITDVTLISAVLPVTINLHLPNYVL 138 (472)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~ll~-~~~-D~vI~D~~~~~~~~~vA~~lgIP~v~~ 138 (472)
......+... ..+..-++ .++ |++|.=. ...-...++...|+|..+-
T Consensus 68 ~~~~~~~~~~-----~~l~~~Lr~~~y~D~vidl~-~~~rs~~l~~~~~a~~riG 116 (349)
T 3tov_A 68 KGRHNSISGL-----NEVAREINAKGKTDIVINLH-PNERTSYLAWKIHAPITTG 116 (349)
T ss_dssp SSHHHHHHHH-----HHHHHHHHHHCCCCEEEECC-CSHHHHHHHHHHCCSEEEE
T ss_pred ccccccHHHH-----HHHHHHHhhCCCCeEEEECC-CChHHHHHHHHhCCCeEEe
Confidence 1111111110 01112233 479 9999655 4445667888899997543
No 55
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=95.26 E-value=0.52 Score=46.27 Aligned_cols=109 Identities=13% Similarity=0.055 Sum_probs=68.7
Q ss_pred ce-eccCCChHHHhc-ccCcCcEEe---ecCcc-hHHHHHHhCC-----cEEecCCcccchhhHHHHHhhCeeeEEeecC
Q 012061 340 LV-VKNWVDQDKVLS-HRAVGGFVS---HGGWN-SLVEAARHGV-----PLLVWPHFGDQKINAEAVERAGLGMWVRSWG 408 (472)
Q Consensus 340 ~~-~~~~~pq~~ll~-~~~~~~~I~---HgG~~-s~~eal~~Gv-----P~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~ 408 (472)
++ +.+++++.++.. +..+++||. .=|.| +..||+++|+ |+|+--+.+--.. + .-|+.+
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~----l---~~g~lv---- 401 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE----L---TSALIV---- 401 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT----C---TTSEEE----
T ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH----h---CCeEEE----
Confidence 44 457888774322 144455775 33554 8999999998 6766544331111 1 146777
Q ss_pred CCCcCCcCHHHHHHHHHHHhcC-HH-HHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHhc
Q 012061 409 WGTELRAKGDEIGLKIKDLMAN-DF-LREQAKRIEEEARKAIGVGGSSERTFKELIDKWKCN 468 (472)
Q Consensus 409 ~~~~~~~~~~~l~~~i~~~l~~-~~-~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 468 (472)
+. -+.++++++|.++|++ ++ .+++.++..+.+++ -+....++.+++.+.+.
T Consensus 402 --~p--~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 402 --NP--YDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp --CT--TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred --CC--CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 43 3689999999999985 33 44445555555443 37778888888887654
No 56
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=94.37 E-value=0.015 Score=56.28 Aligned_cols=84 Identities=12% Similarity=0.031 Sum_probs=55.7
Q ss_pred CCceeccCCChH---HHhcccCcCcEEeec---Cc-chHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEeecCCC
Q 012061 338 QGLVVKNWVDQD---KVLSHRAVGGFVSHG---GW-NSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWG 410 (472)
Q Consensus 338 ~~~~~~~~~pq~---~ll~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~ 410 (472)
+++.+.+++++. .++ .++++||.-. |. .+++||+++|+|+|+- ..+ ....++.-..|+.+
T Consensus 295 ~~v~f~G~~~~~~l~~~~--~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g----~~e~v~~~~~G~lv------ 361 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLL--KRSSIGISLMISPHPSYPPLEMAHFGLRVITN-KYE----NKDLSNWHSNIVSL------ 361 (413)
T ss_dssp EEEEEEESCCHHHHHHHH--HHCCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBT----TBCGGGTBTTEEEE------
T ss_pred CcEEEcCCCCHHHHHHHH--HhCCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCC----cchhhhcCCCEEEe------
Confidence 578888999876 445 4455677532 44 4689999999999983 222 11223333468878
Q ss_pred CcCCcCHHHHHHHHHHHhcCHHHHHH
Q 012061 411 TELRAKGDEIGLKIKDLMANDFLREQ 436 (472)
Q Consensus 411 ~~~~~~~~~l~~~i~~~l~~~~~~~~ 436 (472)
+. -++++++++|.++++|++.+++
T Consensus 362 ~~--~d~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 362 EQ--LNPENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp SS--CSHHHHHHHHHHHHHHTC----
T ss_pred CC--CCHHHHHHHHHHHHcCHHHHHH
Confidence 43 3789999999999988876655
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=92.98 E-value=1.6 Score=43.38 Aligned_cols=85 Identities=7% Similarity=-0.013 Sum_probs=50.3
Q ss_pred CCceeccCCChH---HHhcccCcCcEEeec---Cc-chHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEeecCCC
Q 012061 338 QGLVVKNWVDQD---KVLSHRAVGGFVSHG---GW-NSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWG 410 (472)
Q Consensus 338 ~~~~~~~~~pq~---~ll~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~ 410 (472)
.++.+....+.. .++ +.+++||.-. |. .+++||+++|+|.|+.... -....+..-.-|........
T Consensus 382 ~~v~~~~~~~~~~~~~~~--~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~dg~~G~~~~~~~~- 454 (536)
T 3vue_A 382 GKVRAVVKFNAPLAHLIM--AGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIEGKTGFHMGRLSV- 454 (536)
T ss_dssp TTEEEECSCCHHHHHHHH--HHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCBTTTEEECCCCCS-
T ss_pred CceEEEEeccHHHHHHHH--HhhheeecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeCCCCccccccCCC-
Confidence 567777777765 345 4455677532 33 4899999999999997542 33333433334443311000
Q ss_pred C---cCCcCHHHHHHHHHHHhc
Q 012061 411 T---ELRAKGDEIGLKIKDLMA 429 (472)
Q Consensus 411 ~---~~~~~~~~l~~~i~~~l~ 429 (472)
+ ....+++.|.++|++++.
T Consensus 455 ~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 455 DCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp CTTCCCHHHHHHHHHHHHHHHH
T ss_pred ceeEECCCCHHHHHHHHHHHHH
Confidence 0 011246789999988774
No 58
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=92.00 E-value=5.9 Score=38.70 Aligned_cols=108 Identities=19% Similarity=0.121 Sum_probs=69.3
Q ss_pred CceeccCCChH---HHhcccCcCcEEe---ecCcc-hHHHHHHhC---CcEEecCCcccchhhHHHHHhhCeeeEEeecC
Q 012061 339 GLVVKNWVDQD---KVLSHRAVGGFVS---HGGWN-SLVEAARHG---VPLLVWPHFGDQKINAEAVERAGLGMWVRSWG 408 (472)
Q Consensus 339 ~~~~~~~~pq~---~ll~~~~~~~~I~---HgG~~-s~~eal~~G---vP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~ 408 (472)
.|++.+.+|+. .++..+++ |+. .=|.| +..|++++| .|.|+--+.+ .+..+. .-|+.+
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~--~~allV---- 420 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG--EYCRSV---- 420 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG--GGSEEE----
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC--CCEEEE----
Confidence 46667888875 44443444 554 45887 568999996 6665544332 222221 147788
Q ss_pred CCCcCCcCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHh
Q 012061 409 WGTELRAKGDEIGLKIKDLMAND--FLREQAKRIEEEARKAIGVGGSSERTFKELIDKWKC 467 (472)
Q Consensus 409 ~~~~~~~~~~~l~~~i~~~l~~~--~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 467 (472)
++ -+.++++++|.++|+++ +.+++.+++.+.+++ -+...-++.|++.|..
T Consensus 421 --nP--~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 421 --NP--FDLVEQAEAISAALAAGPRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAA 472 (496)
T ss_dssp --CT--TBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHH
T ss_pred --CC--CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhh
Confidence 43 37899999999999854 455555555555443 4677788888888864
No 59
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=89.15 E-value=2.3 Score=39.06 Aligned_cols=43 Identities=12% Similarity=0.139 Sum_probs=37.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEEcCCCCccc
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQH--HCRVTLITTYPTVSLA 53 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~r--Gh~Vt~~~~~~~~~~~ 53 (472)
|||+++-..+.|++.=...+.+.|+++ +.+|++++.+.+.+.+
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~ 45 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIP 45 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHH
Confidence 689999999999999999999999986 9999999987654443
No 60
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=87.45 E-value=0.66 Score=46.27 Aligned_cols=39 Identities=21% Similarity=0.358 Sum_probs=29.7
Q ss_pred CCCCEEEEEcC--------CCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 8 DSHPHVALIPS--------AGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 8 ~~~~~il~~~~--------~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
.++|||++++. ++.|+ -.-+|+++|+++||+|++++|..
T Consensus 7 ~~~MkIl~vs~E~~P~~K~GGLad--vv~~L~~aL~~~G~~V~Vi~P~Y 53 (536)
T 3vue_A 7 HHHMNVVFVGAEMAPWSKTGGLGD--VLGGLPPAMAANGHRVMVISPRY 53 (536)
T ss_dssp -CCCEEEEECSCBTTTBCSSHHHH--HHHHHHHHHHTTTCEEEEEEECC
T ss_pred CCCcEEEEEEEeccchhccCcHHH--HHHHHHHHHHHcCCeEEEEecCc
Confidence 35799999974 23333 35689999999999999999753
No 61
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=86.27 E-value=0.4 Score=46.09 Aligned_cols=41 Identities=15% Similarity=0.153 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCCCc-----cChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 8 DSHPHVALIPSAGM-----GHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 8 ~~~~~il~~~~~~~-----GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
+.+|||+++..... |=......||+.|+++||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 45799998885421 334568999999999999999999864
No 62
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=85.31 E-value=14 Score=30.19 Aligned_cols=143 Identities=17% Similarity=0.158 Sum_probs=79.5
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhc
Q 012061 274 GSVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLS 353 (472)
Q Consensus 274 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~ 353 (472)
+|.|-|-+||.. +-...+++.+.|++.+..+-..+-+ .++.++.+.+ |.+..+..
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~S---AHRtp~~l~~-----~~~~a~~~--------------- 76 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVS---AHRTPDYMFE-----YAETARER--------------- 76 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC---TTTSHHHHHH-----HHHHTTTT---------------
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEc---cccChHHHHH-----HHHHHHhc---------------
Confidence 457888899875 5677888999999999887666655 2333222211 11111112
Q ss_pred ccCcCcEEeecCcc----hHHHHHHhCCcEEecCCccc---chhhHHHHHhh--CeeeE-EeecCCCCcCCcCHHHHHHH
Q 012061 354 HRAVGGFVSHGGWN----SLVEAARHGVPLLVWPHFGD---QKINAEAVERA--GLGMW-VRSWGWGTELRAKGDEIGLK 423 (472)
Q Consensus 354 ~~~~~~~I~HgG~~----s~~eal~~GvP~l~~P~~~D---Q~~na~~v~~~--G~G~~-l~~~~~~~~~~~~~~~l~~~ 423 (472)
.++.+|.=.|.- ++..+ ..-+|+|.+|.... -.+.-.-+.+. |+.+. + ..+...+..-.-.
T Consensus 77 --g~~ViIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQMP~GvpVaTv------aig~~ga~NAall 147 (181)
T 4b4k_A 77 --GLKVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATV------AIGKAGSTNAGLL 147 (181)
T ss_dssp --TCCEEEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHTCCTTCCCEEC------CSSHHHHHHHHHH
T ss_pred --CceEEEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHhCCCCCceEEE------ecCCccHHHHHHH
Confidence 234466655543 22222 34689999998643 33333445665 54443 2 2221111111111
Q ss_pred HHHHh--cCHHHHHHHHHHHHHHHHHhcc
Q 012061 424 IKDLM--ANDFLREQAKRIEEEARKAIGV 450 (472)
Q Consensus 424 i~~~l--~~~~~~~~a~~l~~~~~~~~~~ 450 (472)
-.++| .|++++++.+..++.+++.+.+
T Consensus 148 A~qILa~~d~~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 148 AAQILGSFHDDIHDALELRREAIEKDVRE 176 (181)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 22344 5899999999888888776443
No 63
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=79.80 E-value=12 Score=31.40 Aligned_cols=39 Identities=21% Similarity=0.215 Sum_probs=34.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
+-.|++++..+.|-..-.+.+|...+.+|++|.|+..-.
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~K 66 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIK 66 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeC
Confidence 446889999999999999999999999999999996543
No 64
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=79.79 E-value=23 Score=28.69 Aligned_cols=145 Identities=14% Similarity=0.111 Sum_probs=80.3
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhc
Q 012061 274 GSVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLS 353 (472)
Q Consensus 274 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~ 353 (472)
+|.|-|-+||.. +-...+++...|+..|.++=..+-+ .++..+.+.+ |.+..++
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S---aHR~p~~l~~-----~~~~a~~---------------- 64 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVS---AHRTPDYMFE-----YAETARE---------------- 64 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC---TTTSHHHHHH-----HHHHTTT----------------
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEe---ccCCHHHHHH-----HHHHHHh----------------
Confidence 456777788765 5777788888888888887555544 2222211111 1111111
Q ss_pred ccCcCcEEeecCcchHHHHHH---hCCcEEecCCccc--chhhHHH-HHh--hCeeeE-EeecCCCC-cCCcCHHHHHHH
Q 012061 354 HRAVGGFVSHGGWNSLVEAAR---HGVPLLVWPHFGD--QKINAEA-VER--AGLGMW-VRSWGWGT-ELRAKGDEIGLK 423 (472)
Q Consensus 354 ~~~~~~~I~HgG~~s~~eal~---~GvP~l~~P~~~D--Q~~na~~-v~~--~G~G~~-l~~~~~~~-~~~~~~~~l~~~ 423 (472)
..++.+|.=.|.-.-+-.+. .-+|+|.+|.... +-..+.. +.+ .|+.+. +.. + -+..++.-++..
T Consensus 65 -~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I----~~a~~~nAallAaq 139 (170)
T 1xmp_A 65 -RGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAI----GKAGSTNAGLLAAQ 139 (170)
T ss_dssp -TTCCEEEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCS----SHHHHHHHHHHHHH
T ss_pred -CCCcEEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEec----CCcchHHHHHHHHH
Confidence 12344676665433232222 3589999998642 2223222 566 466542 200 1 022344455544
Q ss_pred HHHHhcCHHHHHHHHHHHHHHHHHhcc
Q 012061 424 IKDLMANDFLREQAKRIEEEARKAIGV 450 (472)
Q Consensus 424 i~~~l~~~~~~~~a~~l~~~~~~~~~~ 450 (472)
|- -++|++++++.+..+++.++.+.+
T Consensus 140 Il-a~~d~~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 140 IL-GSFHDDIHDALELRREAIEKDVRE 165 (170)
T ss_dssp HH-HTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HH-ccCCHHHHHHHHHHHHHHHHHHHh
Confidence 43 346899999999999998876544
No 65
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=77.91 E-value=8.2 Score=39.22 Aligned_cols=35 Identities=20% Similarity=0.155 Sum_probs=25.1
Q ss_pred HHHhcccCcCcEEeec---Cc-chHHHHHHhCCcEEecCCc
Q 012061 349 DKVLSHRAVGGFVSHG---GW-NSLVEAARHGVPLLVWPHF 385 (472)
Q Consensus 349 ~~ll~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~ 385 (472)
..+++. +++||.-. |+ .+.+||+++|+|.|+.-..
T Consensus 513 ~~~~~~--advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 513 DEFVRG--CHLGVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp HHHHHH--CSEEECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred HHHHhh--ceEEEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 356744 55577543 44 5899999999999997543
No 66
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=74.92 E-value=15 Score=33.50 Aligned_cols=39 Identities=13% Similarity=0.199 Sum_probs=29.4
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCC
Q 012061 7 FDSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTV 50 (472)
Q Consensus 7 ~~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~ 50 (472)
++++|||+|+..|..+ ....+.|.++||+|..+.+.+.+
T Consensus 1 ~~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd~ 39 (317)
T 3rfo_A 1 SNAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQPDR 39 (317)
T ss_dssp CCTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCCCC
T ss_pred CCCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCCCc
Confidence 3567999999988644 34567788889999988876543
No 67
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=74.46 E-value=8.2 Score=33.88 Aligned_cols=40 Identities=20% Similarity=0.223 Sum_probs=26.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCcc
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSL 52 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~ 52 (472)
+|||+.-=-+. +--=+..|+++|.+.| +|+++.|...++.
T Consensus 2 p~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg 41 (251)
T 2wqk_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSG 41 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred CEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcc
Confidence 35666544332 2234678999999999 5998888765443
No 68
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=73.44 E-value=19 Score=32.76 Aligned_cols=37 Identities=14% Similarity=0.159 Sum_probs=26.8
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCC
Q 012061 8 DSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPT 49 (472)
Q Consensus 8 ~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~ 49 (472)
.++|||+|+..|. ......+.|.++||+|..+.+.+.
T Consensus 5 ~~~mrivf~Gt~~-----fa~~~L~~L~~~~~~v~~Vvt~pd 41 (318)
T 3q0i_A 5 SQSLRIVFAGTPD-----FAARHLAALLSSEHEIIAVYTQPE 41 (318)
T ss_dssp --CCEEEEECCSH-----HHHHHHHHHHTSSSEEEEEECCCC
T ss_pred ccCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEcCCC
Confidence 4579999998774 334556788889999988777543
No 69
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=72.78 E-value=38 Score=27.76 Aligned_cols=141 Identities=11% Similarity=0.167 Sum_probs=80.3
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcc
Q 012061 275 SVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSH 354 (472)
Q Consensus 275 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~ 354 (472)
|.|-|-+||.. +-...+++...|+..|.++=..+-+ .+...+.+.+ +.+...+
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S---aHR~p~~l~~-----~~~~a~~----------------- 66 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVS---AHRTPDRMFE-----YAKNAEE----------------- 66 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECC---TTTCHHHHHH-----HHHHTTT-----------------
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEc---ccCCHHHHHH-----HHHHHHh-----------------
Confidence 46777788865 5777788888889999887555544 2222211111 1111111
Q ss_pred cCcCcEEeecCcc----hHHHHHHhCCcEEecCCccc--chhhHH-HHHhh--CeeeE-EeecCCCCcCCcCHHHHHHHH
Q 012061 355 RAVGGFVSHGGWN----SLVEAARHGVPLLVWPHFGD--QKINAE-AVERA--GLGMW-VRSWGWGTELRAKGDEIGLKI 424 (472)
Q Consensus 355 ~~~~~~I~HgG~~----s~~eal~~GvP~l~~P~~~D--Q~~na~-~v~~~--G~G~~-l~~~~~~~~~~~~~~~l~~~i 424 (472)
..++.+|.=.|.- ++..++ .-+|+|.+|.... .-..+. -+.+. |+.+. +. -.+..++.-++..|
T Consensus 67 ~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~-----Id~~~nAa~lAaqI 140 (183)
T 1o4v_A 67 RGIEVIIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVA-----INNAKNAGILAASI 140 (183)
T ss_dssp TTCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECC-----TTCHHHHHHHHHHH
T ss_pred CCCcEEEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEe-----cCCchHHHHHHHHH
Confidence 1234466665542 444443 6789999998642 223332 25666 65432 20 12334455555444
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHHhc
Q 012061 425 KDLMANDFLREQAKRIEEEARKAIG 449 (472)
Q Consensus 425 ~~~l~~~~~~~~a~~l~~~~~~~~~ 449 (472)
- -++|++++++.+..++.....+.
T Consensus 141 l-a~~d~~l~~kL~~~r~~~~~~v~ 164 (183)
T 1o4v_A 141 L-GIKYPEIARKVKEYKERMKREVL 164 (183)
T ss_dssp H-HTTCHHHHHHHHHHHHHHHHHHH
T ss_pred H-hcCCHHHHHHHHHHHHHHHHHHH
Confidence 3 34689999999999888777643
No 70
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=70.97 E-value=39 Score=27.19 Aligned_cols=145 Identities=13% Similarity=0.093 Sum_probs=78.0
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcc
Q 012061 275 SVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSH 354 (472)
Q Consensus 275 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~ 354 (472)
|.|-|-+||.. +-...+++...|+..|..+=..+-+ .++..+.+.+. .+. +..
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~S---aHRtp~~l~~~-----~~~-----------------~~~ 58 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVS---AHRTPDKMFDY-----AET-----------------AKE 58 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECC---TTTCHHHHHHH-----HHH-----------------TTT
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEc---CcCCHHHHHHH-----HHH-----------------HHh
Confidence 35666677764 5777788888888888877555544 22222222111 111 111
Q ss_pred cCcCcEEeecCcchHHHHH---HhCCcEEecCCcccc--hhhHH-HHHhh--CeeeE-EeecCCCCc-CCcCHHHHHHHH
Q 012061 355 RAVGGFVSHGGWNSLVEAA---RHGVPLLVWPHFGDQ--KINAE-AVERA--GLGMW-VRSWGWGTE-LRAKGDEIGLKI 424 (472)
Q Consensus 355 ~~~~~~I~HgG~~s~~eal---~~GvP~l~~P~~~DQ--~~na~-~v~~~--G~G~~-l~~~~~~~~-~~~~~~~l~~~i 424 (472)
..++.||.=.|.-.-+-++ ..-+|+|.+|..... -..+. -+.+. |+++. +.. +. +..++.-++..|
T Consensus 59 ~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I----~~ag~~nAa~lAa~I 134 (166)
T 3oow_A 59 RGLKVIIAGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAI----GMAGAKNAALFAASI 134 (166)
T ss_dssp TTCCEEEEEECSSCCHHHHHHHTCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCS----THHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCcchhhHHHHHhccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEec----CCccchHHHHHHHHH
Confidence 2245578776654322222 235899999985321 12222 24444 55543 200 11 123333443333
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHHhccC
Q 012061 425 KDLMANDFLREQAKRIEEEARKAIGVG 451 (472)
Q Consensus 425 ~~~l~~~~~~~~a~~l~~~~~~~~~~~ 451 (472)
- -++|++++++.+..++++++.+.+.
T Consensus 135 l-~~~d~~l~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 135 L-QHTDINIAKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp H-GGGCHHHHHHHHHHHHHHHHHHHTC
T ss_pred H-cCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 2 2358999999999999988765443
No 71
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=69.64 E-value=44 Score=27.17 Aligned_cols=140 Identities=14% Similarity=0.125 Sum_probs=76.0
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcc
Q 012061 275 SVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSH 354 (472)
Q Consensus 275 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~ 354 (472)
+.|-|-+||.. +-...+++...|+..+.++=..+-+ .+...+.+.+.. +.. ..
T Consensus 8 ~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~S---aHR~p~~~~~~~-----~~a-----------------~~ 60 (174)
T 3lp6_A 8 PRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVS---AHRTPEAMFSYA-----RGA-----------------AA 60 (174)
T ss_dssp CSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC---TTTCHHHHHHHH-----HHH-----------------HH
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEC---CCCCHHHHHHHH-----HHH-----------------Hh
Confidence 34666677764 5777788888888888887555544 223222222111 000 01
Q ss_pred cCcCcEEeecCcc----hHHHHHHhCCcEEecCCcccc--hhhHH-HHHhh--CeeeE-EeecCCCCcCCcCHHHHHHHH
Q 012061 355 RAVGGFVSHGGWN----SLVEAARHGVPLLVWPHFGDQ--KINAE-AVERA--GLGMW-VRSWGWGTELRAKGDEIGLKI 424 (472)
Q Consensus 355 ~~~~~~I~HgG~~----s~~eal~~GvP~l~~P~~~DQ--~~na~-~v~~~--G~G~~-l~~~~~~~~~~~~~~~l~~~i 424 (472)
..++.||.=.|.- ++..++ .-+|+|.+|..... -..+. -+.+. |+.+. +. -.+..++.-++..|
T Consensus 61 ~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~-----I~~~~nAa~lAa~I 134 (174)
T 3lp6_A 61 RGLEVIIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVS-----IGGAGNAGLLAVRM 134 (174)
T ss_dssp HTCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECC-----TTCHHHHHHHHHHH
T ss_pred CCCCEEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEE-----cCcchHHHHHHHHH
Confidence 2234477666643 333333 56899999976321 12222 23443 54332 20 11333444444433
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHHh
Q 012061 425 KDLMANDFLREQAKRIEEEARKAI 448 (472)
Q Consensus 425 ~~~l~~~~~~~~a~~l~~~~~~~~ 448 (472)
- -++|++++++.++.+++.++.+
T Consensus 135 l-~~~d~~l~~kl~~~r~~~~~~v 157 (174)
T 3lp6_A 135 L-GAANPQLRARIVAFQDRLADVV 157 (174)
T ss_dssp H-HTTCHHHHHHHHHHHHHHHHHH
T ss_pred H-hCCCHHHHHHHHHHHHHHHHHH
Confidence 2 2358999999999998887753
No 72
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=69.63 E-value=14 Score=31.83 Aligned_cols=150 Identities=15% Similarity=0.023 Sum_probs=71.6
Q ss_pred hccCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCC
Q 012061 267 WLDDQPEGSVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWV 346 (472)
Q Consensus 267 ~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 346 (472)
|++-. +++++.|+.|.++ ...+..|.+.|..+.++... ..+ .+.+.....++.+....
T Consensus 26 fl~L~-gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~------~~~--------~l~~l~~~~~i~~i~~~ 83 (223)
T 3dfz_A 26 MLDLK-GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT------VSA--------EINEWEAKGQLRVKRKK 83 (223)
T ss_dssp EECCT-TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS------CCH--------HHHHHHHTTSCEEECSC
T ss_pred EEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC------CCH--------HHHHHHHcCCcEEEECC
Confidence 44443 3458888877553 44566677778777665433 111 11111222344433222
Q ss_pred ChHHHhcccCcCcEEeecCcchHHHHHH----hCCcEEecCCcccchhhHH-----HHHhhCeeeEEeecCCCCcCCcCH
Q 012061 347 DQDKVLSHRAVGGFVSHGGWNSLVEAAR----HGVPLLVWPHFGDQKINAE-----AVERAGLGMWVRSWGWGTELRAKG 417 (472)
Q Consensus 347 pq~~ll~~~~~~~~I~HgG~~s~~eal~----~GvP~l~~P~~~DQ~~na~-----~v~~~G~G~~l~~~~~~~~~~~~~ 417 (472)
-....| ..++++|.--|.-.+.+.++ .|+|+-+. |.+..+. .+.+-++-+.+...| ..-.-+
T Consensus 84 ~~~~dL--~~adLVIaAT~d~~~N~~I~~~ak~gi~VNvv----D~p~~~~f~~Paiv~rg~l~iaIST~G---~sP~la 154 (223)
T 3dfz_A 84 VGEEDL--LNVFFIVVATNDQAVNKFVKQHIKNDQLVNMA----SSFSDGNIQIPAQFSRGRLSLAISTDG---ASPLLT 154 (223)
T ss_dssp CCGGGS--SSCSEEEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEETTEEEEEECTT---SCHHHH
T ss_pred CCHhHh--CCCCEEEECCCCHHHHHHHHHHHhCCCEEEEe----CCcccCeEEEeeEEEeCCEEEEEECCC---CCcHHH
Confidence 222334 45667888887765554443 35554332 3333222 122223444442111 111225
Q ss_pred HHHHHHHHHHhcC--HHHHHHHHHHHHHHHHH
Q 012061 418 DEIGLKIKDLMAN--DFLREQAKRIEEEARKA 447 (472)
Q Consensus 418 ~~l~~~i~~~l~~--~~~~~~a~~l~~~~~~~ 447 (472)
..|++.|..++.. ..+.+.+.++++++++.
T Consensus 155 ~~iR~~ie~~lp~~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 155 KRIKEDLSSNYDESYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHHHHHHHHSCTHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHH
Confidence 6778888777742 24555666666666553
No 73
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=67.84 E-value=4.8 Score=35.97 Aligned_cols=54 Identities=17% Similarity=0.063 Sum_probs=38.6
Q ss_pred cCcCcEEeecCcchHHHHHHh------CCcEEecCCcccchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHh
Q 012061 355 RAVGGFVSHGGWNSLVEAARH------GVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLM 428 (472)
Q Consensus 355 ~~~~~~I~HgG~~s~~eal~~------GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l 428 (472)
..++++|+=||-||+++++.. ++|++.+|... .| -...+.++++.++++.++
T Consensus 34 ~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G~-------------lg---------fl~~~~~~~~~~~l~~l~ 91 (272)
T 2i2c_A 34 VEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTGH-------------LG---------FYADWRPAEADKLVKLLA 91 (272)
T ss_dssp SSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESSS-------------CC---------SSCCBCGGGHHHHHHHHH
T ss_pred CCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCCC-------------CC---------cCCcCCHHHHHHHHHHHH
Confidence 456789999999999999875 89999997510 11 112345777888888777
Q ss_pred cC
Q 012061 429 AN 430 (472)
Q Consensus 429 ~~ 430 (472)
++
T Consensus 92 ~g 93 (272)
T 2i2c_A 92 KG 93 (272)
T ss_dssp TT
T ss_pred cC
Confidence 53
No 74
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=66.72 E-value=20 Score=30.83 Aligned_cols=106 Identities=10% Similarity=0.009 Sum_probs=56.4
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEEcCCCCcc----chhhhhhhhhhcCCCccceEEeecCCCCC
Q 012061 8 DSHPHVALIPSAGMGHLTPFLRLAASLVQH--HCRVTLITTYPTVSL----AETQHVSHFLSAYPQVTAKRFHLLPFDPN 81 (472)
Q Consensus 8 ~~~~~il~~~~~~~GHi~P~l~La~~L~~r--Gh~Vt~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (472)
.++|||+|+..++. .-+..+.+.|.+. +++|..+.+...... +++.| +.+... ++.
T Consensus 20 ~~~~rI~~l~SG~g---~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~g-------------Ip~~~~--~~~ 81 (229)
T 3auf_A 20 GHMIRIGVLISGSG---TNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAG-------------VDALHM--DPA 81 (229)
T ss_dssp TTCEEEEEEESSCC---HHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTT-------------CEEEEC--CGG
T ss_pred CCCcEEEEEEeCCc---HHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcC-------------CCEEEE--Ccc
Confidence 34579999976663 2467777888876 688876665422111 11122 222211 111
Q ss_pred CCCCCChHHHHHHHHHHhHhhhhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeCc
Q 012061 82 SANATDPFLLRWEAIRRSAHLLAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYVLFTA 141 (472)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~ 141 (472)
.+.+. ....+.+.+.++ .+||+||+-.|.-.-...+-......++-+.++
T Consensus 82 ~~~~r----------~~~~~~~~~~l~~~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 82 AYPSR----------TAFDAALAERLQAYGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp GSSSH----------HHHHHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred cccch----------hhccHHHHHHHHhcCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 11110 011123445566 799999998744444555666666666655444
No 75
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=66.00 E-value=7.4 Score=33.06 Aligned_cols=38 Identities=24% Similarity=0.257 Sum_probs=32.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
+.||++--.++-|-++ ...|.+.|.++|++|.++.++.
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~ 41 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKA 41 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECcc
Confidence 4689888888877777 8999999999999999998763
No 76
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=66.00 E-value=50 Score=26.51 Aligned_cols=138 Identities=13% Similarity=0.128 Sum_probs=75.0
Q ss_pred eEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhccc
Q 012061 276 VVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHR 355 (472)
Q Consensus 276 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~ 355 (472)
.|-|-+||.. +-...+++...|+..+.++=..+-+ .+...+.+.+ |.+..+ ..
T Consensus 5 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~S---aHR~p~~~~~-----~~~~a~-----------------~~ 57 (163)
T 3ors_A 5 KVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVS---AHRTPKMMVQ-----FASEAR-----------------ER 57 (163)
T ss_dssp CEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC---TTTSHHHHHH-----HHHHTT-----------------TT
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEC---CcCCHHHHHH-----HHHHHH-----------------hC
Confidence 4666677764 5777788888888888887555544 2222221111 111111 12
Q ss_pred CcCcEEeecCcc----hHHHHHHhCCcEEecCCcccc--hhhH-HHHHhh--CeeeE-EeecCCCCc---CCcCHHHHHH
Q 012061 356 AVGGFVSHGGWN----SLVEAARHGVPLLVWPHFGDQ--KINA-EAVERA--GLGMW-VRSWGWGTE---LRAKGDEIGL 422 (472)
Q Consensus 356 ~~~~~I~HgG~~----s~~eal~~GvP~l~~P~~~DQ--~~na-~~v~~~--G~G~~-l~~~~~~~~---~~~~~~~l~~ 422 (472)
.++.+|.=.|.- ++..++ .-+|+|.+|....- -..+ .-+.+. |+.+. + .. +..++.-++.
T Consensus 58 g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV------~I~~a~~~nAa~lAa 130 (163)
T 3ors_A 58 GINIIIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATT------AIGAAGAKNAGILAA 130 (163)
T ss_dssp TCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEEC------CSTHHHHHHHHHHHH
T ss_pred CCcEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEE------EcCCcccHHHHHHHH
Confidence 244577766643 333333 56899999976431 1222 224444 55332 2 12 2233444443
Q ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHh
Q 012061 423 KIKDLMANDFLREQAKRIEEEARKAI 448 (472)
Q Consensus 423 ~i~~~l~~~~~~~~a~~l~~~~~~~~ 448 (472)
.|- -++|++++++.++.++++++.+
T Consensus 131 ~Il-~~~d~~l~~kl~~~r~~~~~~v 155 (163)
T 3ors_A 131 RML-SIQNPSLVEKLNQYESSLIQKV 155 (163)
T ss_dssp HHH-HTTCTHHHHHHHHHHHHHHHHH
T ss_pred HHH-hCCCHHHHHHHHHHHHHHHHHH
Confidence 332 2358999999999998887653
No 77
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=65.62 E-value=53 Score=26.65 Aligned_cols=144 Identities=12% Similarity=0.121 Sum_probs=76.8
Q ss_pred eEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhccc
Q 012061 276 VVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHR 355 (472)
Q Consensus 276 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~ 355 (472)
.|-|-+||.. +-...+++...|+..+.++=..+-+ .++..+.+.+ |.+..++ .
T Consensus 14 ~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~S---aHR~p~~~~~-----~~~~a~~-----------------~ 66 (174)
T 3kuu_A 14 KIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVS---AHRTPDRLFS-----FAEQAEA-----------------N 66 (174)
T ss_dssp CEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC---TTTCHHHHHH-----HHHHTTT-----------------T
T ss_pred cEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEc---ccCCHHHHHH-----HHHHHHh-----------------C
Confidence 4666677764 5777788888888888887655544 2222221111 1111111 2
Q ss_pred CcCcEEeecCcchHHHHH---HhCCcEEecCCcccc--hhhH-HHHHhh--CeeeE-EeecCCCCc-CCcCHHHHHHHHH
Q 012061 356 AVGGFVSHGGWNSLVEAA---RHGVPLLVWPHFGDQ--KINA-EAVERA--GLGMW-VRSWGWGTE-LRAKGDEIGLKIK 425 (472)
Q Consensus 356 ~~~~~I~HgG~~s~~eal---~~GvP~l~~P~~~DQ--~~na-~~v~~~--G~G~~-l~~~~~~~~-~~~~~~~l~~~i~ 425 (472)
.++.||.=.|.-.-+-++ ..-+|+|.+|...-- -..+ .-+.+. |+.+. +.. +. +..++.-++..|-
T Consensus 67 g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I----~~a~~~nAa~lAa~IL 142 (174)
T 3kuu_A 67 GLHVIIAGNGGAAHLPGMLAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAI----GKAGAANAALLAAQIL 142 (174)
T ss_dssp TCSEEEEEEESSCCHHHHHHHTCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCS----SHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECChhhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEe----CCccchHHHHHHHHHH
Confidence 244577766643222222 235899999986321 1222 224443 55332 200 10 2233444443332
Q ss_pred HHhcCHHHHHHHHHHHHHHHHHhccC
Q 012061 426 DLMANDFLREQAKRIEEEARKAIGVG 451 (472)
Q Consensus 426 ~~l~~~~~~~~a~~l~~~~~~~~~~~ 451 (472)
-++|++++++.++.++++++.+.+.
T Consensus 143 -a~~d~~l~~kl~~~r~~~~~~v~~~ 167 (174)
T 3kuu_A 143 -ALHDTELAGRLAHWRQSQTDDVLDN 167 (174)
T ss_dssp -HTTCHHHHHHHHHHHHHHHHHHHTC
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2368999999999999988765443
No 78
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=64.39 E-value=32 Score=31.27 Aligned_cols=35 Identities=14% Similarity=0.138 Sum_probs=25.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
++|||+|+..+.. .....++|.+.||+|..+.+.+
T Consensus 2 ~~mrIvf~Gt~~f-----a~~~L~~L~~~~~~i~~Vvt~p 36 (314)
T 1fmt_A 2 ESLRIIFAGTPDF-----AARHLDALLSSGHNVVGVFTQP 36 (314)
T ss_dssp CCCEEEEEECSHH-----HHHHHHHHHHTTCEEEEEECCC
T ss_pred CCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEeCC
Confidence 5699999987653 3455577777899998777654
No 79
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=63.00 E-value=8.3 Score=30.77 Aligned_cols=38 Identities=8% Similarity=0.079 Sum_probs=27.4
Q ss_pred CCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 5 GGFDSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 5 ~~~~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
......++|+++..+..| ..+++.|.++|++|+++...
T Consensus 14 ~~~~~~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp ---CCCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred hcccCCCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECC
Confidence 344456799999765544 56899999999999998653
No 80
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=62.72 E-value=8 Score=32.10 Aligned_cols=66 Identities=12% Similarity=0.149 Sum_probs=43.6
Q ss_pred cchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhc-CH------HHHHHHHHHHHHHHH----HhccCCChH
Q 012061 387 DQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMA-ND------FLREQAKRIEEEARK----AIGVGGSSE 455 (472)
Q Consensus 387 DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~-~~------~~~~~a~~l~~~~~~----~~~~~g~~~ 455 (472)
+..+.+..-++.|+|+.+ |+|+|.++|.+.++ ++ .|+ +.-.+-..+++ -|+++....
T Consensus 100 ~~id~~~Fe~~cGVGV~V-----------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK 167 (187)
T 3tl4_X 100 EASTKMGMNENSGVGIEI-----------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFK 167 (187)
T ss_dssp GGCCHHHHHHTTTTTCCC-----------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHH
T ss_pred CCCCHHHHHHHCCCCeEe-----------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHH
Confidence 344455555667999999 89999999999995 22 344 55555555443 356777777
Q ss_pred HHHHHHHHH
Q 012061 456 RTFKELIDK 464 (472)
Q Consensus 456 ~~~~~~~~~ 464 (472)
..++.-+-.
T Consensus 168 ~~vD~~~l~ 176 (187)
T 3tl4_X 168 PIIDQEVLK 176 (187)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777754443
No 81
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=62.68 E-value=5.7 Score=35.73 Aligned_cols=34 Identities=24% Similarity=0.239 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
|||++... .|.+= ..|++.|.++||+|+.++-.+
T Consensus 1 MkILVTGa--tGfIG--~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGG--TGFIG--TALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETT--TSHHH--HHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECC--CCHHH--HHHHHHHHHCCCEEEEEECCC
Confidence 78777643 35443 568999999999999987543
No 82
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=62.58 E-value=6.3 Score=30.48 Aligned_cols=33 Identities=21% Similarity=0.238 Sum_probs=24.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
+.|+|+++.. |.+- ..+++.|.++||+|+++..
T Consensus 3 ~~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 3 HGMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp --CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEEC
Confidence 3589999954 4443 4688999999999998864
No 83
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=61.68 E-value=9.2 Score=39.60 Aligned_cols=118 Identities=10% Similarity=0.053 Sum_probs=78.5
Q ss_pred eccCCChHHHhcccCcCcEEeecCcchHHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEeecCC-CCcCCcCHHHH
Q 012061 342 VKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGW-GTELRAKGDEI 420 (472)
Q Consensus 342 ~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~-~~~~~~~~~~l 420 (472)
+.++.+-.++| ..++++||= =...+.|.+..++|+|....-.|+..+- . -|...+-..+ -..-..+.++|
T Consensus 603 ~~~~~di~~ll--~~aD~lITD-ySSv~fD~~~l~kPiif~~~D~~~Y~~~----~--rg~y~d~~~~~pg~~~~~~~eL 673 (729)
T 3l7i_A 603 VSNYNDVSELF--LISDCLITD-YSSVMFDYGILKRPQFFFAYDIDKYDKG----L--RGFYMNYMEDLPGPIYTEPYGL 673 (729)
T ss_dssp CTTCSCHHHHH--HTCSEEEES-SCTHHHHHGGGCCCEEEECTTTTTTTSS----C--CSBSSCTTSSSSSCEESSHHHH
T ss_pred CCCCcCHHHHH--HHhCEEEee-chHHHHhHHhhCCCEEEecCCHHHHhhc----c--CCcccChhHhCCCCeECCHHHH
Confidence 34566777888 446679997 3567889999999999987655554320 1 1223210000 01113478899
Q ss_pred HHHHHHHhc-CHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHhcc
Q 012061 421 GLKIKDLMA-NDFLREQAKRIEEEARKAIGVGGSSERTFKELIDKWKCNN 469 (472)
Q Consensus 421 ~~~i~~~l~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 469 (472)
.++|..... +..|+++.++..+++-. ..+|.++.+.++.+++....-.
T Consensus 674 ~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~dg~as~ri~~~i~~~~~~~~ 722 (729)
T 3l7i_A 674 AKELKNLDKVQQQYQEKIDAFYDRFCS-VDNGKASQYIGDLIHKDIKEQL 722 (729)
T ss_dssp HHHHTTHHHHHHHTHHHHHHHHHHHST-TCCSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHhhhhccchhHHHHHHHHHHHhCC-ccCChHHHHHHHHHHhcCcCcc
Confidence 999988875 45678777777777665 3789999999999888776433
No 84
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=61.17 E-value=8.7 Score=35.24 Aligned_cols=34 Identities=21% Similarity=0.131 Sum_probs=28.6
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 8 DSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 8 ~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
+..+||.|+..++.| |-.+|+.|+++||+|+..=
T Consensus 2 ~~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D 35 (326)
T 3eag_A 2 NAMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCD 35 (326)
T ss_dssp -CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEE
T ss_pred CCCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEc
Confidence 346799999999988 5579999999999999873
No 85
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=60.66 E-value=27 Score=31.72 Aligned_cols=35 Identities=14% Similarity=0.232 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPT 49 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~ 49 (472)
+|||+|+..|..+ +...++|.++||+|..+.+.+.
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd 36 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQPD 36 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECCCC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCCC
Confidence 5899999988655 3456788889999988877544
No 86
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=59.21 E-value=12 Score=31.41 Aligned_cols=37 Identities=11% Similarity=0.025 Sum_probs=31.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEEcCC
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQH-HCRVTLITTYP 48 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~r-Gh~Vt~~~~~~ 48 (472)
|||++--.++.|-+. ...|.+.|.++ |++|.++.++.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~ 38 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKW 38 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECch
Confidence 588888888876665 99999999999 99999998764
No 87
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=58.26 E-value=8.7 Score=30.52 Aligned_cols=32 Identities=19% Similarity=0.197 Sum_probs=25.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
.||+++.++..| ..+++.|.++||+|+++...
T Consensus 4 ~~vlI~G~G~vG-----~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILA-----INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHH-----HHHHHHHHHTTCCEEEEECC
T ss_pred CcEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 478888654433 78999999999999999653
No 88
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=58.05 E-value=16 Score=28.57 Aligned_cols=38 Identities=13% Similarity=-0.018 Sum_probs=34.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
+.+|++.+.++-+|-....-++..|..+|++|......
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 35899999999999999999999999999999988763
No 89
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=57.82 E-value=40 Score=30.35 Aligned_cols=81 Identities=11% Similarity=0.052 Sum_probs=48.1
Q ss_pred eEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhccc
Q 012061 276 VVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHR 355 (472)
Q Consensus 276 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~ 355 (472)
.|.++--|-.....+.+..+...|.+.+..+.+..... ..+. ..+.. .+. .
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~---~~~a--------~~~~~----------------~~~--~ 62 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE---QGDA--------TKYCQ----------------EFA--S 62 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS---TTHH--------HHHHH----------------HHT--T
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC---cchH--------HHHHH----------------Hhh--c
Confidence 34455444333234566778888887777766554331 1110 00000 011 2
Q ss_pred CcCcEEeecCcchHHHHHH------hCCcEEecCCc
Q 012061 356 AVGGFVSHGGWNSLVEAAR------HGVPLLVWPHF 385 (472)
Q Consensus 356 ~~~~~I~HgG~~s~~eal~------~GvP~l~~P~~ 385 (472)
..+.+|.-||-||+.|++. .++|+.++|..
T Consensus 63 ~~d~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 63 KVDLIIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp TCSEEEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred CCCEEEEEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 4567999999999999875 57899999974
No 90
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=57.37 E-value=30 Score=29.44 Aligned_cols=103 Identities=5% Similarity=0.030 Sum_probs=53.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCC--eEEEEEcCCCCcc----chhhhhhhhhhcCCCccceEEeecCCCCCCCC
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHC--RVTLITTYPTVSL----AETQHVSHFLSAYPQVTAKRFHLLPFDPNSAN 84 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh--~Vt~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (472)
|||+|+..++. .-+..+.+.|.+.+| +|..+.+...... +++.|+ ..... ++..+.
T Consensus 2 ~rI~vl~SG~g---~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gI-------------p~~~~--~~~~~~ 63 (216)
T 2ywr_A 2 LKIGVLVSGRG---SNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNV-------------ECKVI--QRKEFP 63 (216)
T ss_dssp EEEEEEECSCC---HHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTC-------------CEEEC--CGGGSS
T ss_pred CEEEEEEeCCc---HHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCC-------------CEEEe--Cccccc
Confidence 58888866653 346778888888888 7765554432211 112221 11110 111111
Q ss_pred CCChHHHHHHHHHHhHhhhhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeCc
Q 012061 85 ATDPFLLRWEAIRRSAHLLAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYVLFTA 141 (472)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~ 141 (472)
+. ....+.+.+.++ .++|+||+-.+.-.-...+-+.....++-++++
T Consensus 64 ~r----------~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 64 SK----------KEFEERMALELKKKGVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp SH----------HHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred ch----------hhhhHHHHHHHHhcCCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 10 011123345566 799999988733444455555555566655444
No 91
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=56.52 E-value=78 Score=25.57 Aligned_cols=142 Identities=13% Similarity=0.166 Sum_probs=76.1
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcc
Q 012061 275 SVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSH 354 (472)
Q Consensus 275 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~ 354 (472)
|.|-|-+||.. +-...+++...|+..+.++-..+-+ .+...+.+.+. .+..++
T Consensus 7 ~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~S---aHR~p~~~~~~-----~~~a~~----------------- 59 (169)
T 3trh_A 7 IFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILS---AHRTPKETVEF-----VENADN----------------- 59 (169)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC---TTTSHHHHHHH-----HHHHHH-----------------
T ss_pred CcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEc---ccCCHHHHHHH-----HHHHHh-----------------
Confidence 35666677764 5777788888888888887655554 22322222211 111111
Q ss_pred cCcCcEEeecCcchHHHHH---HhCCcEEecCCcccc--hhhH-HHHHh--hCeeeE-EeecCCCCc-CCcCHHHHHHHH
Q 012061 355 RAVGGFVSHGGWNSLVEAA---RHGVPLLVWPHFGDQ--KINA-EAVER--AGLGMW-VRSWGWGTE-LRAKGDEIGLKI 424 (472)
Q Consensus 355 ~~~~~~I~HgG~~s~~eal---~~GvP~l~~P~~~DQ--~~na-~~v~~--~G~G~~-l~~~~~~~~-~~~~~~~l~~~i 424 (472)
..++.||.=.|.-.-+-++ ..-+|+|.+|...-. -..+ .-+.+ .|+.+. +.. +. +..++.-++..|
T Consensus 60 ~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I----~~a~~~nAa~lAa~I 135 (169)
T 3trh_A 60 RGCAVFIAAAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAI----GKAGAKNAAILAAQI 135 (169)
T ss_dssp TTEEEEEEEECSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCS----THHHHHHHHHHHHHH
T ss_pred CCCcEEEEECChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEec----CCccchHHHHHHHHH
Confidence 2234477766653322222 235899999986321 1222 22455 365432 200 11 223334444333
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHHh
Q 012061 425 KDLMANDFLREQAKRIEEEARKAI 448 (472)
Q Consensus 425 ~~~l~~~~~~~~a~~l~~~~~~~~ 448 (472)
- -++|++++++.+..++++++.+
T Consensus 136 l-~~~d~~l~~kl~~~r~~~~~~v 158 (169)
T 3trh_A 136 I-ALQDKSIAQKLVQQRTAKRETL 158 (169)
T ss_dssp H-HTTCHHHHHHHHHHHHHHHHHH
T ss_pred H-cCCCHHHHHHHHHHHHHHHHHH
Confidence 2 2368999999999998887653
No 92
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=56.32 E-value=12 Score=30.33 Aligned_cols=40 Identities=15% Similarity=-0.032 Sum_probs=35.8
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 8 DSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 8 ~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
.++.+|++.+.++-.|-....-++..|..+|++|.+....
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 3567999999999999999999999999999999988643
No 93
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=55.37 E-value=8.6 Score=33.30 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=29.0
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 8 DSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 8 ~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
+.+|+|.|+..+..|- .||+.|+++||+|+.+..
T Consensus 4 ~~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 4568999999999884 689999999999997744
No 94
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=55.16 E-value=14 Score=30.29 Aligned_cols=44 Identities=9% Similarity=0.106 Sum_probs=35.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccchh
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAET 55 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~ 55 (472)
+||++.-.++.|=+. ...|.+.|+++|++|.++.++.-...+..
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFING 49 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSCH
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhhH
Confidence 488888888866554 89999999999999999998865555443
No 95
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=55.15 E-value=37 Score=31.85 Aligned_cols=35 Identities=9% Similarity=-0.083 Sum_probs=27.0
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 8 DSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 8 ~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
.+.++|+++..+.. .+.+++++++.|++|.++..+
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 34568999887754 366999999999999999653
No 96
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=54.50 E-value=88 Score=25.59 Aligned_cols=142 Identities=12% Similarity=0.117 Sum_probs=80.1
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcc
Q 012061 275 SVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSH 354 (472)
Q Consensus 275 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~ 354 (472)
+.|-|-+||.. +-...+++...|+..|.++=..+-+ .++..+.+.+ |.+..+.
T Consensus 22 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S---aHR~p~~l~~-----~~~~a~~----------------- 74 (182)
T 1u11_A 22 PVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVS---AHRTPDRLAD-----YARTAAE----------------- 74 (182)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC---TTTCHHHHHH-----HHHHTTT-----------------
T ss_pred CEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEc---ccCCHHHHHH-----HHHHHHh-----------------
Confidence 35666677764 5777788888888888887555544 2222211111 1111111
Q ss_pred cCcCcEEeecCcc----hHHHHHHhCCcEEecCCccc--chhhHHH-HHh--hCeeeE-EeecCCCCc---CCcCHHHHH
Q 012061 355 RAVGGFVSHGGWN----SLVEAARHGVPLLVWPHFGD--QKINAEA-VER--AGLGMW-VRSWGWGTE---LRAKGDEIG 421 (472)
Q Consensus 355 ~~~~~~I~HgG~~----s~~eal~~GvP~l~~P~~~D--Q~~na~~-v~~--~G~G~~-l~~~~~~~~---~~~~~~~l~ 421 (472)
..++.+|.=.|.- ++..++ .-+|+|.+|.... .-..+.. +.+ .|+.+. + .. +..++.-++
T Consensus 75 ~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV------~I~~a~~~nAallA 147 (182)
T 1u11_A 75 RGLNVIIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTL------AIGASGAKNAALLA 147 (182)
T ss_dssp TTCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEEC------CSSHHHHHHHHHHH
T ss_pred CCCcEEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCceEEE------ecCCccchHHHHHH
Confidence 1234466665542 344333 5789999998642 2223222 566 466642 3 12 223444444
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHhccC
Q 012061 422 LKIKDLMANDFLREQAKRIEEEARKAIGVG 451 (472)
Q Consensus 422 ~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~ 451 (472)
..|- -++|++++++.+..++..++.+.+.
T Consensus 148 aqIl-a~~d~~l~~kL~~~r~~~~~~v~~~ 176 (182)
T 1u11_A 148 ASIL-ALYNPALAARLETWRALQTASVPNS 176 (182)
T ss_dssp HHHH-GGGCHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHH-ccCCHHHHHHHHHHHHHHHHHHHHh
Confidence 4332 3469999999999999988765444
No 97
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=54.47 E-value=8.5 Score=36.21 Aligned_cols=29 Identities=34% Similarity=0.382 Sum_probs=25.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEE
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLI 44 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~ 44 (472)
|||+|+..+--| +.+|..|+++||+|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 799999887655 88999999999999998
No 98
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=54.25 E-value=20 Score=31.59 Aligned_cols=40 Identities=15% Similarity=-0.052 Sum_probs=36.3
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 8 DSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 8 ~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
.++.+|++.+.++-.|-....-++..|..+|++|.++...
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 4456899999999999999999999999999999988764
No 99
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=54.01 E-value=25 Score=34.20 Aligned_cols=29 Identities=10% Similarity=0.022 Sum_probs=22.4
Q ss_pred hhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEE
Q 012061 105 PLLS-PPLSALITDVTLISAVLPVTINLHLPNYV 137 (472)
Q Consensus 105 ~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~ 137 (472)
++++ .+||++|... ....+|+++|||++.
T Consensus 395 ~~i~~~~pDL~ig~~----~~~~~a~k~gIP~~~ 424 (483)
T 3pdi_A 395 KTVDEYQADILIAGG----RNMYTALKGRVPFLD 424 (483)
T ss_dssp HHHHHTTCSEEECCG----GGHHHHHHTTCCBCC
T ss_pred HHHHhcCCCEEEECC----chhHHHHHcCCCEEE
Confidence 4444 6899999876 356789999999863
No 100
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=53.69 E-value=16 Score=35.40 Aligned_cols=84 Identities=11% Similarity=0.007 Sum_probs=51.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCCCCCCCCCCChHHH
Q 012061 12 HVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPFDPNSANATDPFLL 91 (472)
Q Consensus 12 ~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (472)
|++++.- -.-.+.|++.|.+.|.+|+.+.+....+..++.. ...+ . .+ .
T Consensus 315 rv~i~~~-----~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~----------~~~v--~-----------~~---D 363 (458)
T 3pdi_B 315 RTAIAAD-----PDLLLGFDALLRSMGAHTVAAVVPARAAALVDSP----------LPSV--R-----------VG---D 363 (458)
T ss_dssp EEEEECC-----HHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTT----------SSCE--E-----------ES---H
T ss_pred EEEEECC-----cHHHHHHHHHHHHCCCEEEEEEECCCChhhhhCc----------cCcE--E-----------eC---C
Confidence 6777533 3455788999999999999887764222111100 0000 0 00 1
Q ss_pred HHHHHHHhHhhhhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEEE
Q 012061 92 RWEAIRRSAHLLAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYVL 138 (472)
Q Consensus 92 ~~~~~~~~~~~~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~ 138 (472)
+ ..++++++ .+||++|.+. ....+|+++|||++.+
T Consensus 364 ~--------~~le~~i~~~~pDllig~~----~~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 364 L--------EDLEHAARAGQAQLVIGNS----HALASARRLGVPLLRA 399 (458)
T ss_dssp H--------HHHHHHHHHHTCSEEEECT----THHHHHHHTTCCEEEC
T ss_pred H--------HHHHHHHHhcCCCEEEECh----hHHHHHHHcCCCEEEe
Confidence 1 12445555 6899999887 3567999999998743
No 101
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=53.60 E-value=9.4 Score=33.67 Aligned_cols=54 Identities=28% Similarity=0.359 Sum_probs=39.8
Q ss_pred cCcCcEEeecCcchHHHHHHh---CCcEEecCCcccchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhcC
Q 012061 355 RAVGGFVSHGGWNSLVEAARH---GVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMAN 430 (472)
Q Consensus 355 ~~~~~~I~HgG~~s~~eal~~---GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~ 430 (472)
..++++|+=||-||+++++.. ++|.+.++. +- +|. ...+.++++.++++.++++
T Consensus 40 ~~~D~vv~~GGDGTll~~a~~~~~~~PilGIn~-G~------------~Gf---------l~~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 40 VTADLIVVVGGDGTVLKAAKKAADGTPMVGFKA-GR------------LGF---------LTSYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp BCCSEEEEEECHHHHHHHHTTBCTTCEEEEEES-SS------------CCS---------SCCBCGGGHHHHHHHHHTT
T ss_pred CCCCEEEEEeCcHHHHHHHHHhCCCCCEEEEEC-CC------------CCc---------cCcCCHHHHHHHHHHHHcC
Confidence 356789999999999999887 889888863 20 121 1234678888888888764
No 102
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=53.30 E-value=21 Score=30.66 Aligned_cols=39 Identities=21% Similarity=0.198 Sum_probs=35.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
+++|++..-|+-|-.+-++.+|..|+++|+.|.++...+
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 578999999999999999999999999999999887665
No 103
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=52.85 E-value=16 Score=33.31 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=28.3
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 8 DSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 8 ~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
.+.|+|.|+..+..| ..+|+.|+++||+|+++.
T Consensus 29 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~d 61 (320)
T 4dll_A 29 PYARKITFLGTGSMG-----LPMARRLCEAGYALQVWN 61 (320)
T ss_dssp CCCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEEC
T ss_pred cCCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEc
Confidence 456899999998888 678999999999999874
No 104
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=52.72 E-value=91 Score=25.24 Aligned_cols=143 Identities=15% Similarity=0.115 Sum_probs=76.3
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhc
Q 012061 274 GSVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLS 353 (472)
Q Consensus 274 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~ 353 (472)
.|.|-|-+||.. +-...++....|+..+.++=..+-+ .++..+.+.+ |.+..+.
T Consensus 12 ~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~s---aHR~p~~l~~-----~~~~a~~---------------- 65 (173)
T 4grd_A 12 APLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVS---AHRMPDEMFD-----YAEKARE---------------- 65 (173)
T ss_dssp SCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC---TTTSHHHHHH-----HHHHHTT----------------
T ss_pred CCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEc---cccCHHHHHH-----HHHHHHh----------------
Confidence 456777788865 5677788888899999887555544 2222222111 1111111
Q ss_pred ccCcCcEEeecCc-c---hHHHHHHhCCcEEecCCcccc---hhhHHHHHhh--CeeeEEeecCCCCc-CCcCHHHHHHH
Q 012061 354 HRAVGGFVSHGGW-N---SLVEAARHGVPLLVWPHFGDQ---KINAEAVERA--GLGMWVRSWGWGTE-LRAKGDEIGLK 423 (472)
Q Consensus 354 ~~~~~~~I~HgG~-~---s~~eal~~GvP~l~~P~~~DQ---~~na~~v~~~--G~G~~l~~~~~~~~-~~~~~~~l~~~ 423 (472)
..++.+|.=.|. + ++..+ ..-+|+|.+|....- .+--.-+.+. |+.+..--- +. +..++.-++..
T Consensus 66 -~g~~ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i---~~~~a~NAallA~~ 140 (173)
T 4grd_A 66 -RGLRAIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAI---GEAGAANAALFAVS 140 (173)
T ss_dssp -TTCSEEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCS---SHHHHHHHHHHHHH
T ss_pred -cCCeEEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEec---CCcchHHHHHHHHH
Confidence 223346655443 3 33333 457999999976432 2222234454 554432000 10 12223333332
Q ss_pred HHHHhcCHHHHHHHHHHHHHHHHHh
Q 012061 424 IKDLMANDFLREQAKRIEEEARKAI 448 (472)
Q Consensus 424 i~~~l~~~~~~~~a~~l~~~~~~~~ 448 (472)
| --++|+++++|.++.+++.++.+
T Consensus 141 I-La~~d~~l~~kl~~~r~~~~~~v 164 (173)
T 4grd_A 141 I-LSGNSVDYANRLAAFRVRQNEAA 164 (173)
T ss_dssp H-HTTSCHHHHHHHHHHHHHHHHHH
T ss_pred H-HcCCCHHHHHHHHHHHHHHHHHH
Confidence 2 12468999999999988877654
No 105
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=51.78 E-value=43 Score=28.33 Aligned_cols=103 Identities=9% Similarity=0.014 Sum_probs=54.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEEcCCCCccc----hhhhhhhhhhcCCCccceEEeecCCCCCCCC
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQH--HCRVTLITTYPTVSLA----ETQHVSHFLSAYPQVTAKRFHLLPFDPNSAN 84 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~r--Gh~Vt~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (472)
+||+++-.++.+ -+..+.++|.+. +|+|..+.+......+ +..|+ ..... ++..+.
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gI-------------p~~~~--~~~~~~ 65 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENV-------------PAFVF--SPKDYP 65 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTC-------------CEEEC--CGGGSS
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCC-------------CEEEe--Cccccc
Confidence 588888777633 366777788876 7898777654322111 11221 11111 111111
Q ss_pred CCChHHHHHHHHHHhHhhhhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeCc
Q 012061 85 ATDPFLLRWEAIRRSAHLLAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYVLFTA 141 (472)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~ 141 (472)
+. ....+.+.+.++ .+||+||+-.|.-.-...+-......++-++++
T Consensus 66 ~~----------~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 66 SK----------AAFESEILRELKGRQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp SH----------HHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred ch----------hhhHHHHHHHHHhcCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 10 011123345556 799999988744445555666666666665544
No 106
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=51.54 E-value=17 Score=30.75 Aligned_cols=39 Identities=18% Similarity=-0.090 Sum_probs=35.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
++.+|++.+.++-.|-....-++..|..+|++|.++...
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~ 125 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVD 125 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSS
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 456899999999999999999999999999999998754
No 107
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=51.34 E-value=29 Score=26.90 Aligned_cols=39 Identities=5% Similarity=0.050 Sum_probs=28.8
Q ss_pred EEEEEcC-C--CccChHHHHHHHHHHHhCCCeEEEEEcCCCC
Q 012061 12 HVALIPS-A--GMGHLTPFLRLAASLVQHHCRVTLITTYPTV 50 (472)
Q Consensus 12 ~il~~~~-~--~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~ 50 (472)
+++|+-. + +.......+.+|...++.||+|+++-+..-.
T Consensus 17 kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV 58 (134)
T 3mc3_A 17 XILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGP 58 (134)
T ss_dssp EEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGG
T ss_pred eEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcH
Confidence 4444433 4 4667888899999999999999999776433
No 108
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=50.39 E-value=9.7 Score=34.73 Aligned_cols=136 Identities=20% Similarity=0.146 Sum_probs=73.2
Q ss_pred CCceEEEeeccc---ccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCC--
Q 012061 273 EGSVVYVSFGSR---LALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVD-- 347 (472)
Q Consensus 273 ~~~~v~vs~GS~---~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p-- 347 (472)
+++.|.+.-||. -..+.+.+.++++.|.+.+.++++..++ ..+.+.. +.+.+.. +++.+.+-.+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~----~~e~~~~-----~~i~~~~--~~~~l~g~~sl~ 245 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGA----PHEEERA-----KRLAEGF--AYVEVLPKMSLE 245 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSS----HHHHHHH-----HHHHTTC--TTEEECCCCCHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCC----HHHHHHH-----HHHHhhC--CcccccCCCCHH
Confidence 345777777765 3456888889998887667776554343 1111111 1111111 2333333332
Q ss_pred -hHHHhcccCcCcEEee-cCcchHHHHHHhCCcEEec--CCcccchhhHHHHHhhCee-eEEeecCCCCcCCcCHHHHHH
Q 012061 348 -QDKVLSHRAVGGFVSH-GGWNSLVEAARHGVPLLVW--PHFGDQKINAEAVERAGLG-MWVRSWGWGTELRAKGDEIGL 422 (472)
Q Consensus 348 -q~~ll~~~~~~~~I~H-gG~~s~~eal~~GvP~l~~--P~~~DQ~~na~~v~~~G~G-~~l~~~~~~~~~~~~~~~l~~ 422 (472)
-..+++ .++++|+. .|...+ |.+.|+|+|++ |. | ..+-.=.|-. ..+.. ........+++++.+
T Consensus 246 el~ali~--~a~l~I~~DSG~~Hl--Aaa~g~P~v~lfg~t--~----p~~~~P~~~~~~~~~~-~~~cm~~I~~~~V~~ 314 (326)
T 2gt1_A 246 GVARVLA--GAKFVVSVDTGLSHL--TAALDRPNITVYGPT--D----PGLIGGYGKNQMVCRA-PGNELSQLTANAVKQ 314 (326)
T ss_dssp HHHHHHH--TCSEEEEESSHHHHH--HHHTTCCEEEEESSS--C----HHHHCCCSSSEEEEEC-GGGCGGGCCHHHHHH
T ss_pred HHHHHHH--hCCEEEecCCcHHHH--HHHcCCCEEEEECCC--C----hhhcCCCCCCceEecC-CcccccCCCHHHHHH
Confidence 237774 46779999 444333 56699999998 32 1 1111001111 11210 000235679999999
Q ss_pred HHHHHhcC
Q 012061 423 KIKDLMAN 430 (472)
Q Consensus 423 ~i~~~l~~ 430 (472)
+++++|++
T Consensus 315 ~i~~~l~~ 322 (326)
T 2gt1_A 315 FIEENAEK 322 (326)
T ss_dssp HHHHTTTT
T ss_pred HHHHHHHH
Confidence 99999864
No 109
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=50.37 E-value=19 Score=30.25 Aligned_cols=42 Identities=19% Similarity=0.101 Sum_probs=33.6
Q ss_pred CCEEEEEcCCCccChH-HHHHHHHHHHhCCCeEEEEEcCCCCcc
Q 012061 10 HPHVALIPSAGMGHLT-PFLRLAASLVQHHCRVTLITTYPTVSL 52 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~-P~l~La~~L~~rGh~Vt~~~~~~~~~~ 52 (472)
..||++--.++ +..+ =.+.|.+.|.++|++|.++.++.-...
T Consensus 7 ~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~ 49 (201)
T 3lqk_A 7 GKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTT 49 (201)
T ss_dssp TCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCT
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHH
Confidence 35888888887 5666 789999999999999999988754333
No 110
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=49.36 E-value=19 Score=28.36 Aligned_cols=40 Identities=13% Similarity=0.095 Sum_probs=29.4
Q ss_pred CCCEEEEE-cCC-CccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 9 SHPHVALI-PSA-GMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 9 ~~~~il~~-~~~-~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
+.|+++++ ..| ..-.+.-.+-++..|.++||+|++++++.
T Consensus 5 ~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npA 46 (157)
T 1kjn_A 5 STGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPA 46 (157)
T ss_dssp -CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred cceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHH
Confidence 45665544 445 44556667899999999999999999874
No 111
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=49.33 E-value=64 Score=29.60 Aligned_cols=100 Identities=11% Similarity=0.083 Sum_probs=55.6
Q ss_pred CEEEEEcCCCcc--C--hHHHHHHHHHHHhCCCeEEEEEcCCCCccchhhhhhhhhhcCCCccceEEeecCCCCCCCCCC
Q 012061 11 PHVALIPSAGMG--H--LTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSAYPQVTAKRFHLLPFDPNSANAT 86 (472)
Q Consensus 11 ~~il~~~~~~~G--H--i~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (472)
.-|++.|..+.. . ..-+..|++.|.++|++|.++..+...+..+ ++....+. .. .. +.+.
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~-----~i~~~~~~--~~-~~--------l~g~ 249 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQ-----PVVEQMET--KP-IV--------ATGK 249 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHH-----HHHHTCSS--CC-EE--------CTTC
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHH-----HHHHhccc--cc-EE--------eeCC
Confidence 467777776543 2 3458999999999999998876553322222 11111110 00 00 1111
Q ss_pred ChHHHHHHHHHHhHhhhhhhcCCCCcEEEEcCCChhhhHHHHHhcCCCeEEEeCc
Q 012061 87 DPFLLRWEAIRRSAHLLAPLLSPPLSALITDVTLISAVLPVTINLHLPNYVLFTA 141 (472)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~ll~~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~ 141 (472)
..+..+ ..++. +.|++|+-- . ....+|..+|+|.+.++..
T Consensus 250 ~sl~e~-----------~ali~-~a~~~i~~D-s--G~~HlAaa~g~P~v~lfg~ 289 (349)
T 3tov_A 250 FQLGPL-----------AAAMN-RCNLLITND-S--GPMHVGISQGVPIVALYGP 289 (349)
T ss_dssp CCHHHH-----------HHHHH-TCSEEEEES-S--HHHHHHHTTTCCEEEECSS
T ss_pred CCHHHH-----------HHHHH-hCCEEEECC-C--CHHHHHHhcCCCEEEEECC
Confidence 111111 12222 689999753 2 5677899999999988654
No 112
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=49.27 E-value=11 Score=29.27 Aligned_cols=32 Identities=16% Similarity=0.076 Sum_probs=25.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
.+||+++..+.. -..+|+.|.++||+|+++..
T Consensus 6 ~~~v~I~G~G~i-----G~~la~~L~~~g~~V~~id~ 37 (141)
T 3llv_A 6 RYEYIVIGSEAA-----GVGLVRELTAAGKKVLAVDK 37 (141)
T ss_dssp CCSEEEECCSHH-----HHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEECCCHH-----HHHHHHHHHHCCCeEEEEEC
Confidence 357988876443 36799999999999998854
No 113
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=48.34 E-value=11 Score=34.36 Aligned_cols=33 Identities=18% Similarity=0.260 Sum_probs=27.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
|+|+++..++.| ..+|..|++.||+|+++....
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALG-----LYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTH-----HHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcCc
Confidence 689999999988 457899999999999997653
No 114
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=48.32 E-value=1.3e+02 Score=28.87 Aligned_cols=147 Identities=14% Similarity=0.055 Sum_probs=71.7
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceec-cCCChHHH
Q 012061 273 EGSVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVK-NWVDQDKV 351 (472)
Q Consensus 273 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~pq~~l 351 (472)
+++++.|..|.++ ...+..|.+.|..+.++-.. .. ..+.+.....++.+. +-....+
T Consensus 12 ~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~------~~--------~~~~~l~~~~~i~~~~~~~~~~~- 69 (457)
T 1pjq_A 12 DRDCLIVGGGDVA-------ERKARLLLEAGARLTVNALT------FI--------PQFTVWANEGMLTLVEGPFDETL- 69 (457)
T ss_dssp TCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESS------CC--------HHHHHHHTTTSCEEEESSCCGGG-
T ss_pred CCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCC------CC--------HHHHHHHhcCCEEEEECCCCccc-
Confidence 3458888877654 34455666677776655533 10 111111112344332 2222333
Q ss_pred hcccCcCcEEeecCcch-----HHHHHHhCCcEEec--CCcccchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHHH
Q 012061 352 LSHRAVGGFVSHGGWNS-----LVEAARHGVPLLVW--PHFGDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLKI 424 (472)
Q Consensus 352 l~~~~~~~~I~HgG~~s-----~~eal~~GvP~l~~--P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i 424 (472)
| ..++++|.--|.-. ..+|-..|+|+-++ |-..|...-| .+.+.++=+.+... .....-+..|++.|
T Consensus 70 l--~~~~lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa-~~~~~~l~iaIsT~---Gksp~la~~ir~~i 143 (457)
T 1pjq_A 70 L--DSCWLAIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPS-IIDRSPLMVAVSSG---GTSPVLARLLREKL 143 (457)
T ss_dssp G--TTCSEEEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCE-EEEETTEEEEEECT---TSCHHHHHHHHHHH
T ss_pred c--CCccEEEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeee-EEEeCCeEEEEECC---CCChHHHHHHHHHH
Confidence 4 24567888777653 44566779996333 3222221100 01122333334111 11112256788888
Q ss_pred HHHhcC--HHHHHHHHHHHHHHHHH
Q 012061 425 KDLMAN--DFLREQAKRIEEEARKA 447 (472)
Q Consensus 425 ~~~l~~--~~~~~~a~~l~~~~~~~ 447 (472)
...|.+ ..+.+.+.++++++++.
T Consensus 144 e~~l~~~~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 144 ESLLPQHLGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp HHHSCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHhcchhHHHHHHHHHHHHHHHHhh
Confidence 888853 34555666666666554
No 115
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=47.60 E-value=25 Score=29.72 Aligned_cols=42 Identities=19% Similarity=0.325 Sum_probs=34.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLA 53 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~ 53 (472)
..||++.-.++.+-+. ...|.+.|.++| +|.++.++.-...+
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv 60 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFL 60 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTC
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhc
Confidence 4589999999988776 899999999999 99999987544443
No 116
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=47.32 E-value=10 Score=34.59 Aligned_cols=33 Identities=15% Similarity=0.214 Sum_probs=28.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
|+|+++..++.| ..+|..|++.||+|+++....
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCh
Confidence 799999998888 467889999999999997654
No 117
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=46.75 E-value=15 Score=33.22 Aligned_cols=33 Identities=18% Similarity=0.121 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 8 DSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 8 ~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
.++|+|.|+..+..|. .+|+.|+++||+|+++.
T Consensus 5 ~~~~~I~iIG~G~mG~-----~~a~~l~~~G~~V~~~d 37 (303)
T 3g0o_A 5 GTDFHVGIVGLGSMGM-----GAARSCLRAGLSTWGAD 37 (303)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEEC
T ss_pred CCCCeEEEECCCHHHH-----HHHHHHHHCCCeEEEEE
Confidence 4568999998887774 68999999999999884
No 118
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=46.36 E-value=16 Score=29.33 Aligned_cols=35 Identities=14% Similarity=0.134 Sum_probs=29.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
-+++++..++ | +.|++++++.|.++|.+|+++ ...
T Consensus 24 ~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r 58 (158)
T 3lrx_A 24 GKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVT 58 (158)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EEC
T ss_pred CeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 4788888776 4 999999999999999999998 543
No 119
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=46.15 E-value=16 Score=31.58 Aligned_cols=38 Identities=16% Similarity=0.189 Sum_probs=33.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
|+|+|..-++-|=..-...||..|+++|++|.++-...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 68888777899999999999999999999999986543
No 120
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=45.72 E-value=39 Score=28.70 Aligned_cols=104 Identities=8% Similarity=0.070 Sum_probs=53.3
Q ss_pred CCCCCCCEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEEcCC-CCcc---chhhhhhhhhhcCCCccceEEeecCC
Q 012061 5 GGFDSHPHVALIPSAGMGHLTPFLRLAASLVQH--HCRVTLITTYP-TVSL---AETQHVSHFLSAYPQVTAKRFHLLPF 78 (472)
Q Consensus 5 ~~~~~~~~il~~~~~~~GHi~P~l~La~~L~~r--Gh~Vt~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (472)
.++.+++||+++-.++.+. +.+|.+++.+. +++|..+.+.. .... +++.|+ .+...+
T Consensus 3 ~~~~~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gI-------------p~~~~~- 65 (215)
T 3kcq_A 3 GSMKKELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGI-------------PTFVVK- 65 (215)
T ss_dssp ----CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTC-------------CEEECC-
T ss_pred CCCCCCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCC-------------CEEEeC-
Confidence 3556677998877766333 55566666554 36888776632 2211 112221 122111
Q ss_pred CCCCCCCCChHHHHHHHHHHhHhhhhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeCc
Q 012061 79 DPNSANATDPFLLRWEAIRRSAHLLAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYVLFTA 141 (472)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~ 141 (472)
...+. .+.+.+.++ .+||+||+-.|.-.-...+-+...-.++-++++
T Consensus 66 -~~~~~---------------~~~~~~~L~~~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 66 -RKPLD---------------IEHISTVLREHDVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp -BTTBC---------------HHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -cccCC---------------hHHHHHHHHHhCCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 11110 023445555 799999988844445555666666666655544
No 121
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=45.62 E-value=34 Score=28.00 Aligned_cols=45 Identities=11% Similarity=0.021 Sum_probs=28.4
Q ss_pred eeccCCChH-HHhcccCcCcEEeecCcchHHH---HHHhCCcEEecCCc
Q 012061 341 VVKNWVDQD-KVLSHRAVGGFVSHGGWNSLVE---AARHGVPLLVWPHF 385 (472)
Q Consensus 341 ~~~~~~pq~-~ll~~~~~~~~I~HgG~~s~~e---al~~GvP~l~~P~~ 385 (472)
++++..+.. .++..-+-..++--||.||+.| ++.+++|++.+|.+
T Consensus 92 i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp EECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred EEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 344555544 3332222235666788887655 56799999999983
No 122
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=45.45 E-value=62 Score=27.37 Aligned_cols=103 Identities=6% Similarity=-0.034 Sum_probs=54.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEEcCCCCcc----chhhhhhhhhhcCCCccceEEeecCCCCCCCC
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQH--HCRVTLITTYPTVSL----AETQHVSHFLSAYPQVTAKRFHLLPFDPNSAN 84 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~r--Gh~Vt~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (472)
|||+++..+..+ -+.+|.+.+.+. +|+|..+.+...... +++.| +...... +..+.
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~g-------------Ip~~~~~--~~~~~ 62 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAG-------------IATHTLI--ASAFD 62 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTT-------------CEEEECC--GGGCS
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcC-------------CcEEEeC--ccccc
Confidence 477777766643 366777777775 688877665532221 11122 2222211 11111
Q ss_pred CCChHHHHHHHHHHhHhhhhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeCc
Q 012061 85 ATDPFLLRWEAIRRSAHLLAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYVLFTA 141 (472)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~ 141 (472)
+. ....+.+.+.++ .+||+||+-.|.-.-...+-......++-++++
T Consensus 63 ~r----------~~~~~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 63 SR----------EAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp SH----------HHHHHHHHHHHGGGCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ch----------hhccHHHHHHHHhcCCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 10 011123445566 799999988743444555666666667666544
No 123
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=45.36 E-value=16 Score=28.45 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
+.||+++.++..| ..+|+.|.++||+|+++...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 3589999887655 57899999999999999654
No 124
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=45.13 E-value=1.3e+02 Score=28.24 Aligned_cols=34 Identities=15% Similarity=0.125 Sum_probs=23.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
.-||+++..... + | .+.+++++.|++|+++.+.+
T Consensus 5 ~k~l~Il~~~~~-~--~--~i~~aa~~lG~~vv~v~~~~ 38 (425)
T 3vot_A 5 NKNLAIICQNKH-L--P--FIFEEAERLGLKVTFFYNSA 38 (425)
T ss_dssp CCEEEEECCCTT-C--C--HHHHHHHHTTCEEEEEEETT
T ss_pred CcEEEEECCChh-H--H--HHHHHHHHCCCEEEEEECCC
Confidence 347888865442 2 2 35678888999999987653
No 125
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=44.79 E-value=22 Score=30.12 Aligned_cols=38 Identities=8% Similarity=0.112 Sum_probs=30.4
Q ss_pred CEEEEEcCCCccChHH-HHHHHHHHHhCCCeEEEEEcCCC
Q 012061 11 PHVALIPSAGMGHLTP-FLRLAASLVQHHCRVTLITTYPT 49 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P-~l~La~~L~~rGh~Vt~~~~~~~ 49 (472)
.||++.-.++ +..+- ...|.+.|.++|++|.++.++.-
T Consensus 6 k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A 44 (207)
T 3mcu_A 6 KRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTV 44 (207)
T ss_dssp CEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC--
T ss_pred CEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHH
Confidence 4788877777 55665 88999999999999999988743
No 126
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=44.66 E-value=21 Score=35.29 Aligned_cols=31 Identities=6% Similarity=-0.074 Sum_probs=23.8
Q ss_pred hhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEE
Q 012061 103 LAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYV 137 (472)
Q Consensus 103 ~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~ 137 (472)
+.++++ .+||++|... ....+|+++|||++.
T Consensus 448 l~~~i~~~~pDl~ig~~----~~~~~a~k~gIP~~~ 479 (533)
T 1mio_A 448 MEVVLEKLKPDMFFAGI----KEKFVIQKGGVLSKQ 479 (533)
T ss_dssp HHHHHHHHCCSEEEECH----HHHHHHHHTTCEEEE
T ss_pred HHHHHHhcCCCEEEccc----chhHHHHhcCCCEEE
Confidence 345555 6999999776 457899999999873
No 127
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=44.50 E-value=28 Score=29.59 Aligned_cols=41 Identities=7% Similarity=-0.105 Sum_probs=35.4
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 7 FDSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 7 ~~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
..++.+|++.+.++-.|-....-++..|..+|++|......
T Consensus 89 ~~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 89 GEEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp ---CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred CCCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 34457999999999999999999999999999999998764
No 128
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=44.32 E-value=20 Score=32.49 Aligned_cols=34 Identities=18% Similarity=0.203 Sum_probs=28.1
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 7 FDSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 7 ~~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
..+.|+|.|+..+..| ..+|+.|+++||+|+++.
T Consensus 18 ~~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~d 51 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWN 51 (310)
T ss_dssp CCCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred cccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEe
Confidence 3446899999888776 678999999999999874
No 129
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=44.16 E-value=14 Score=36.33 Aligned_cols=36 Identities=14% Similarity=0.260 Sum_probs=29.3
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 8 DSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 8 ~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
+++.||||+..+.-| +.+|+.|.++|++||++...+
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 345699999887655 578999999999999998764
No 130
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=44.10 E-value=6.7 Score=38.04 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=28.1
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
+.|||+++..+-.| ..||+.|.+.||+||++=.
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~ 34 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDK 34 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEES
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEEC
Confidence 46999999988766 4699999999999999943
No 131
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=43.92 E-value=35 Score=29.94 Aligned_cols=43 Identities=16% Similarity=0.108 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCcc
Q 012061 8 DSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSL 52 (472)
Q Consensus 8 ~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~ 52 (472)
.++|||++.-=-+. |--=+..|+++|.+ +|+|+++.|...++-
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg 51 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSG 51 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTT
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcC
Confidence 34599999876554 44457788888887 899999998865543
No 132
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=43.88 E-value=16 Score=32.85 Aligned_cols=32 Identities=34% Similarity=0.365 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
+|+|+++..+..| ..+|..|+++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEEC
Confidence 4799999887777 4678999999999998853
No 133
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=43.30 E-value=18 Score=33.24 Aligned_cols=32 Identities=16% Similarity=0.135 Sum_probs=27.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
+|+|.|+..+..| ..+|..|++.||+|+++..
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 5799999999888 5789999999999998854
No 134
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=42.87 E-value=16 Score=33.09 Aligned_cols=35 Identities=23% Similarity=0.242 Sum_probs=28.3
Q ss_pred CCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 6 GFDSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 6 ~~~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
.....|+|.|+..+..|. .+|+.|+++||+|+++.
T Consensus 5 ~~~~~~~IgiIG~G~mG~-----~~A~~l~~~G~~V~~~d 39 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGT-----IMAQVLLKQGKRVAIWN 39 (306)
T ss_dssp CCCCSCSEEEECCSHHHH-----HHHHHHHHTTCCEEEEC
T ss_pred cccCCCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEe
Confidence 344567899998887774 78999999999999873
No 135
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=42.60 E-value=18 Score=32.96 Aligned_cols=32 Identities=22% Similarity=0.230 Sum_probs=26.3
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEE
Q 012061 8 DSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLI 44 (472)
Q Consensus 8 ~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~ 44 (472)
..+|+|+++..++.| ..+|..|++.||+|+++
T Consensus 17 ~~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp ---CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred ccCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 346899999999888 56889999999999998
No 136
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=42.35 E-value=19 Score=32.39 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=27.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
+|+|.|+..+..|. .+|+.|+++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 56899999888884 689999999999998843
No 137
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=42.17 E-value=9.5 Score=32.49 Aligned_cols=31 Identities=23% Similarity=0.259 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
|+|+++.++.. -..+|+.|.++||+|+++..
T Consensus 1 M~iiIiG~G~~-----G~~la~~L~~~g~~v~vid~ 31 (218)
T 3l4b_C 1 MKVIIIGGETT-----AYYLARSMLSRKYGVVIINK 31 (218)
T ss_dssp CCEEEECCHHH-----HHHHHHHHHHTTCCEEEEES
T ss_pred CEEEEECCCHH-----HHHHHHHHHhCCCeEEEEEC
Confidence 67888875433 35799999999999999964
No 138
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=42.15 E-value=18 Score=32.07 Aligned_cols=32 Identities=9% Similarity=0.110 Sum_probs=26.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
|+|.|+..+..| ..+|..|+++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 689999887777 47899999999999998543
No 139
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=41.97 E-value=17 Score=32.67 Aligned_cols=32 Identities=25% Similarity=0.285 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
.++|.|+..+..|+ .+|..|+++||+|+++..
T Consensus 15 ~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~ 46 (302)
T 1f0y_A 15 VKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQ 46 (302)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEEC
Confidence 35799999988886 588999999999998843
No 140
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=40.91 E-value=60 Score=28.36 Aligned_cols=32 Identities=19% Similarity=0.157 Sum_probs=23.8
Q ss_pred CCcEEE-EcCCChhhhHHHHHhcCCCeEEEeCc
Q 012061 110 PLSALI-TDVTLISAVLPVTINLHLPNYVLFTA 141 (472)
Q Consensus 110 ~~D~vI-~D~~~~~~~~~vA~~lgIP~v~~~~~ 141 (472)
.||+|| .|+....-+..=|.++|||++.+.-+
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 688877 56644456777889999999877544
No 141
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=40.89 E-value=20 Score=33.09 Aligned_cols=32 Identities=22% Similarity=0.137 Sum_probs=26.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
+|+|+++..+..|. .+|..|+++||+|+++..
T Consensus 4 ~mki~iiG~G~~G~-----~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLGLGNGGH-----AFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred cCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 47999998877773 578889999999998843
No 142
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=40.60 E-value=1.5e+02 Score=26.81 Aligned_cols=147 Identities=8% Similarity=0.078 Sum_probs=73.7
Q ss_pred CceEEEeecccccCC-HHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHh
Q 012061 274 GSVVYVSFGSRLALS-MEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVL 352 (472)
Q Consensus 274 ~~~v~vs~GS~~~~~-~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll 352 (472)
++++++. |..-... .++...+++-.++.+++-++.+++ +|.+.. ..++..+. .......++
T Consensus 102 ~~~lll~-gpeP~~~w~~f~~~vl~~a~~~gV~~vv~Lgg--------------l~~~~p-htrp~~V~--~~at~~~l~ 163 (319)
T 2p90_A 102 KPFLMLS-GPEPDLRWGDFSNAVVDLVEKFGVENTICLYA--------------APMTVP-HTRPTVVT--AHGNSTDRL 163 (319)
T ss_dssp CEEEEEE-EECCSBCHHHHHHHHHHHHHHTTCCEEEEEEE--------------EEESCC-TTSCCCEE--EEESSGGGC
T ss_pred CeEEEEE-CCCChHHHHHHHHHHHHHHHHcCCCEEEEEeC--------------ccCCCC-CCCCCCeE--EEeCCHHHH
Confidence 4466555 5554333 677778888888999988887775 111000 00001221 111111211
Q ss_pred cc-cC-cCcEEeecCcchHH--HHHHhCCcEEec----CCcc---cchhhHHHH-Hhh--CeeeEEeecCCCCcC--CcC
Q 012061 353 SH-RA-VGGFVSHGGWNSLV--EAARHGVPLLVW----PHFG---DQKINAEAV-ERA--GLGMWVRSWGWGTEL--RAK 416 (472)
Q Consensus 353 ~~-~~-~~~~I~HgG~~s~~--eal~~GvP~l~~----P~~~---DQ~~na~~v-~~~--G~G~~l~~~~~~~~~--~~~ 416 (472)
.. .. ..-..--||..+++ ++...|+|.+++ |++. +-+.-|..+ +.+ =.|+.+ +.. .-.
T Consensus 164 ~~~~~~~~~~~ipggi~glL~~~~~~~Gi~a~~l~~~vphYl~~~pdP~AA~~lL~~l~~l~gl~i------d~~~L~e~ 237 (319)
T 2p90_A 164 KDQVSLDTRMTVPGSASLMLEKLLKDKGKNVSGYTVHVPHYVSASPYPAATLKLLQSIADSADLNL------PLLALERD 237 (319)
T ss_dssp SSCCCCCCCEEECCCHHHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHTCCC------CCHHHHHH
T ss_pred hhhhccccCcEEeccHHHHHHHHHHHCCCCEEEEEEecCcccCCCCCHHHHHHHHHHHHHHHCCCC------CHHHHHHH
Confidence 10 00 01122235666554 456899999986 4222 334444443 222 135555 332 233
Q ss_pred HHHHHHHHHHHhc-CHHHHHHHHHHHHHH
Q 012061 417 GDEIGLKIKDLMA-NDFLREQAKRIEEEA 444 (472)
Q Consensus 417 ~~~l~~~i~~~l~-~~~~~~~a~~l~~~~ 444 (472)
++++.+.|+++.+ ++++.+-+++|-+..
T Consensus 238 A~~~e~~i~~l~~~~~e~~~~V~~LE~~~ 266 (319)
T 2p90_A 238 AEKVHRQLMEQTEESSEIQRVVGALEQQY 266 (319)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhhh
Confidence 5677788888875 666666555554444
No 143
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=40.42 E-value=1.4e+02 Score=23.84 Aligned_cols=137 Identities=11% Similarity=0.140 Sum_probs=74.4
Q ss_pred eEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhccc
Q 012061 276 VVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHR 355 (472)
Q Consensus 276 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~ 355 (472)
.|-|-+||.. +-...+++...|+..+.++-..+-+ .+...+.+.+. .+..... .
T Consensus 4 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~s---aHR~p~~~~~~-----~~~a~~~----------------~ 57 (159)
T 3rg8_A 4 LVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGS---AHKTAEHVVSM-----LKEYEAL----------------D 57 (159)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECC---TTTCHHHHHHH-----HHHHHTS----------------C
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEc---ccCCHHHHHHH-----HHHhhhc----------------C
Confidence 4666677764 5777788888888888887655544 22222222111 1111000 1
Q ss_pred CcCcEEeecCcc----hHHHHHHhCCcEEecCCcc---cchhhHHHHHhh--CeeeEEeecCCCCcCCcCHHHHHHHHHH
Q 012061 356 AVGGFVSHGGWN----SLVEAARHGVPLLVWPHFG---DQKINAEAVERA--GLGMWVRSWGWGTELRAKGDEIGLKIKD 426 (472)
Q Consensus 356 ~~~~~I~HgG~~----s~~eal~~GvP~l~~P~~~---DQ~~na~~v~~~--G~G~~l~~~~~~~~~~~~~~~l~~~i~~ 426 (472)
.++.+|.=.|.- ++..++ .-+|+|.+|... +..+ -.-+.+. |+.+.- =.+..++.-++..|-
T Consensus 58 ~~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~d-LlS~vqmp~GvpVat------v~~~~nAa~lA~~Il- 128 (159)
T 3rg8_A 58 RPKLYITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGAD-IYSSLRMPSGISPAL------VLEPKNAALLAARIF- 128 (159)
T ss_dssp SCEEEEEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTH-HHHHHCCCTTCCCEE------CCSHHHHHHHHHHHH-
T ss_pred CCcEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCcc-HHHHHhCCCCCceEE------ecCchHHHHHHHHHH-
Confidence 244577777753 333333 568999999753 2222 2333444 555442 112233333333322
Q ss_pred HhcCHHHHHHHHHHHHHHHHH
Q 012061 427 LMANDFLREQAKRIEEEARKA 447 (472)
Q Consensus 427 ~l~~~~~~~~a~~l~~~~~~~ 447 (472)
-++|++++++.+..+++.++.
T Consensus 129 ~~~d~~l~~kl~~~r~~~~~~ 149 (159)
T 3rg8_A 129 SLYDKEIADSVKSYMESNAQK 149 (159)
T ss_dssp TTTCHHHHHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHH
Confidence 235899999998888887664
No 144
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=40.35 E-value=40 Score=27.94 Aligned_cols=36 Identities=19% Similarity=0.221 Sum_probs=30.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 12 HVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 12 ~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
||++.-.++.|-+ =...|.+.|.++|++|.++.++.
T Consensus 3 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~ 38 (189)
T 2ejb_A 3 KIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRN 38 (189)
T ss_dssp EEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHH
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChh
Confidence 7888888887754 57999999999999999998764
No 145
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=39.13 E-value=53 Score=27.65 Aligned_cols=45 Identities=11% Similarity=0.004 Sum_probs=32.0
Q ss_pred hhhhccCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCceEE
Q 012061 264 ILKWLDDQPEGSVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLW 308 (472)
Q Consensus 264 ~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~ 308 (472)
+.+|+.....+.++||..+|......+.+..+.++|+++|..+.+
T Consensus 18 ~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~ 62 (206)
T 3l4e_A 18 FTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEE 62 (206)
T ss_dssp HHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 455654444456999998876544456788899999999987644
No 146
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=39.12 E-value=32 Score=30.73 Aligned_cols=32 Identities=19% Similarity=0.294 Sum_probs=25.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
++|+|.|+..+..|. .+|+.|.+.||+|+++.
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 34 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFD 34 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEe
Confidence 458999998887775 46888999999998763
No 147
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=38.95 E-value=1.7e+02 Score=28.62 Aligned_cols=32 Identities=22% Similarity=0.215 Sum_probs=23.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 12 HVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 12 ~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
+++++ |.-.-.+.|++.|.+-|.+|+.+.+..
T Consensus 366 rvaI~-----gd~~~~~~la~fL~elGm~vv~v~~~~ 397 (523)
T 3u7q_B 366 RFALW-----GDPDFVMGLVKFLLELGCEPVHILCHN 397 (523)
T ss_dssp EEEEE-----CSHHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred EEEEE-----CCchHHHHHHHHHHHcCCEEEEEEeCC
Confidence 67776 233456788899999999999887653
No 148
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=38.79 E-value=25 Score=31.56 Aligned_cols=32 Identities=19% Similarity=0.308 Sum_probs=26.8
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
+.|+|.|+..+..|. .+|+.|+++||+|+++.
T Consensus 2 ~m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d 33 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFD 33 (302)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEc
Confidence 357999999888874 78999999999999884
No 149
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=38.23 E-value=35 Score=27.45 Aligned_cols=36 Identities=14% Similarity=0.140 Sum_probs=28.8
Q ss_pred EEEEEcCC---CccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 12 HVALIPSA---GMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 12 ~il~~~~~---~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
+|+++|.= ..--.++...|++.|.++|.+|.|..++
T Consensus 25 ~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 25 KVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp EEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred eEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 67787752 1124679999999999999999999887
No 150
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=38.05 E-value=41 Score=33.15 Aligned_cols=42 Identities=14% Similarity=0.018 Sum_probs=32.2
Q ss_pred CCCCCCEEEEEcCCCccC--hHHHHHHHHH--HHhCCCeEEEEEcC
Q 012061 6 GFDSHPHVALIPSAGMGH--LTPFLRLAAS--LVQHHCRVTLITTY 47 (472)
Q Consensus 6 ~~~~~~~il~~~~~~~GH--i~P~l~La~~--L~~rGh~Vt~~~~~ 47 (472)
...++|||+++.....+| -.-+..|++. |.+.||+|++++..
T Consensus 201 ~~~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~ 246 (568)
T 2vsy_A 201 RSKGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATS 246 (568)
T ss_dssp CSSSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESS
T ss_pred CCCCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECC
Confidence 346679999998765444 3556789999 77789999999874
No 151
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=37.91 E-value=25 Score=29.61 Aligned_cols=31 Identities=13% Similarity=0.161 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
.|+|.++..+..| ..+|+.|+++||+|+++.
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~ 49 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYG 49 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEc
Confidence 5789999877766 678999999999999874
No 152
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=37.60 E-value=27 Score=25.61 Aligned_cols=32 Identities=19% Similarity=0.244 Sum_probs=23.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCC-CeEEEEEc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHH-CRVTLITT 46 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rG-h~Vt~~~~ 46 (472)
.++|+++..+..| ..+++.|.++| ++|+++..
T Consensus 5 ~~~v~I~G~G~iG-----~~~~~~l~~~g~~~v~~~~r 37 (118)
T 3ic5_A 5 RWNICVVGAGKIG-----QMIAALLKTSSNYSVTVADH 37 (118)
T ss_dssp CEEEEEECCSHHH-----HHHHHHHHHCSSEEEEEEES
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCceEEEEeC
Confidence 3578888654444 46899999999 99988754
No 153
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=37.42 E-value=20 Score=32.12 Aligned_cols=28 Identities=21% Similarity=0.203 Sum_probs=24.3
Q ss_pred CcCcEEeecCcchHHHHHHh----CCcEEecC
Q 012061 356 AVGGFVSHGGWNSLVEAARH----GVPLLVWP 383 (472)
Q Consensus 356 ~~~~~I~HgG~~s~~eal~~----GvP~l~~P 383 (472)
.++++|+=||-||+.+++.. ++|.+.++
T Consensus 63 ~~D~vi~~GGDGT~l~a~~~~~~~~~P~lGI~ 94 (292)
T 2an1_A 63 QADLAVVVGGDGNMLGAARTLARYDINVIGIN 94 (292)
T ss_dssp HCSEEEECSCHHHHHHHHHHHTTSSCEEEEBC
T ss_pred CCCEEEEEcCcHHHHHHHHHhhcCCCCEEEEE
Confidence 46779999999999999853 78999997
No 154
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=37.27 E-value=36 Score=27.43 Aligned_cols=36 Identities=14% Similarity=0.141 Sum_probs=28.9
Q ss_pred EEEEEcCC---CccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 12 HVALIPSA---GMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 12 ~il~~~~~---~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
+|+++|.= ..--.++...|++.|.++|.+|.|..++
T Consensus 24 ~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 24 SIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp EEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred eEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 67887751 1124679999999999999999999887
No 155
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=37.24 E-value=1.5e+02 Score=25.33 Aligned_cols=32 Identities=22% Similarity=0.220 Sum_probs=23.0
Q ss_pred CCcEEE-EcCCChhhhHHHHHhcCCCeEEEeCc
Q 012061 110 PLSALI-TDVTLISAVLPVTINLHLPNYVLFTA 141 (472)
Q Consensus 110 ~~D~vI-~D~~~~~~~~~vA~~lgIP~v~~~~~ 141 (472)
.||+|| .|+....-+..=|.++|||++.+.-+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDT 189 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDT 189 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecC
Confidence 488887 56634445667788999999877543
No 156
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=37.16 E-value=23 Score=32.93 Aligned_cols=33 Identities=21% Similarity=0.255 Sum_probs=28.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
++|+|.|+..+..| ..+|..|++.||+|++...
T Consensus 28 ~~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r 60 (356)
T 3k96_A 28 FKHPIAILGAGSWG-----TALALVLARKGQKVRLWSY 60 (356)
T ss_dssp CCSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECS
T ss_pred cCCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 45899999998887 4689999999999999865
No 157
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=36.98 E-value=1.1e+02 Score=27.72 Aligned_cols=30 Identities=23% Similarity=0.187 Sum_probs=24.8
Q ss_pred CcCcEEeecCcchHHHHHH------hCCcEEecCCc
Q 012061 356 AVGGFVSHGGWNSLVEAAR------HGVPLLVWPHF 385 (472)
Q Consensus 356 ~~~~~I~HgG~~s~~eal~------~GvP~l~~P~~ 385 (472)
.++++|.=||-||+.|++. .++|+.++|..
T Consensus 80 ~~d~vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~G 115 (337)
T 2qv7_A 80 NYDVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMG 115 (337)
T ss_dssp TCSEEEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred CCCEEEEEcCchHHHHHHHHHHhCCCCCcEEEecCC
Confidence 4577999999999999864 46899999974
No 158
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=36.77 E-value=19 Score=33.27 Aligned_cols=35 Identities=11% Similarity=0.117 Sum_probs=22.8
Q ss_pred hhhcCCCCcEEEEcCCChh-hhHHHHHhcCCCeEEEe
Q 012061 104 APLLSPPLSALITDVTLIS-AVLPVTINLHLPNYVLF 139 (472)
Q Consensus 104 ~~ll~~~~D~vI~D~~~~~-~~~~vA~~lgIP~v~~~ 139 (472)
+.+++++||+||... ... -.....+.+|||++.+.
T Consensus 90 E~Ilal~PDLIi~~~-~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 90 ESLITLQPDVVFITY-VDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp HHHHHHCCSEEEEES-CCHHHHHHHHHHHTSCEEEEC
T ss_pred HHHhcCCCCEEEEeC-CccchHHHHHHhcCCcEEEEe
Confidence 333336999999876 322 22345577899988763
No 159
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=36.58 E-value=19 Score=32.67 Aligned_cols=30 Identities=20% Similarity=0.220 Sum_probs=24.5
Q ss_pred cCcCcEEeecCcchHHHHHHh----CCcEEecCC
Q 012061 355 RAVGGFVSHGGWNSLVEAARH----GVPLLVWPH 384 (472)
Q Consensus 355 ~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~ 384 (472)
..++++|+-||-||+++++.. ++|++.++.
T Consensus 74 ~~~d~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 74 DGCELVLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp --CCCEEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cCCCEEEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 346789999999999999865 899999874
No 160
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=36.27 E-value=22 Score=33.05 Aligned_cols=38 Identities=16% Similarity=0.203 Sum_probs=27.6
Q ss_pred CCCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 4 SGGFDSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 4 ~~~~~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
..+......|+++..+..| +..|..|+++|++|+++-.
T Consensus 11 ~~~~~~~~dvvIIGgG~~G-----l~~A~~La~~G~~V~llE~ 48 (382)
T 1ryi_A 11 IRAMKRHYEAVVIGGGIIG-----SAIAYYLAKENKNTALFES 48 (382)
T ss_dssp ---CCSEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred hhccCCCCCEEEECcCHHH-----HHHHHHHHhCCCcEEEEeC
Confidence 3344445689999877544 7889999999999999943
No 161
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=36.27 E-value=69 Score=23.35 Aligned_cols=33 Identities=24% Similarity=0.370 Sum_probs=27.6
Q ss_pred eEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeC
Q 012061 276 VVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKG 312 (472)
Q Consensus 276 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~ 312 (472)
-||+-|.| +++.+++|...+++.|.+++..+..
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysd 35 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSD 35 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecC
Confidence 46666654 7999999999999999999888865
No 162
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=35.82 E-value=1.2e+02 Score=23.24 Aligned_cols=58 Identities=12% Similarity=0.120 Sum_probs=36.1
Q ss_pred hCCcEEecCCcccchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHH
Q 012061 375 HGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRI 440 (472)
Q Consensus 375 ~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l 440 (472)
..+|+|++--..| ........+.|+--.+ .+.++.++|..+|+.++.....+...+++
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~g~~~~l-------~kP~~~~~L~~~i~~~~~~~~~~~~~~~~ 131 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQDGAYDFI-------AKPFAADRLVQSARRAEEKRRLVMENRSL 131 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHHTTCCEEE-------ESSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHhcCCCeEE-------eCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788887744333 3444555667765555 23468999999999998644443333333
No 163
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=35.81 E-value=65 Score=24.56 Aligned_cols=33 Identities=6% Similarity=0.015 Sum_probs=24.2
Q ss_pred EEcCCCcc--ChHHHHHHHHHHHhCCCeE-EEEEcC
Q 012061 15 LIPSAGMG--HLTPFLRLAASLVQHHCRV-TLITTY 47 (472)
Q Consensus 15 ~~~~~~~G--Hi~P~l~La~~L~~rGh~V-t~~~~~ 47 (472)
++..+.+| .....+.+|..+.+.||+| +++-..
T Consensus 6 iv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 6 QINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp EECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 33444444 4567789999999999999 888654
No 164
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=35.67 E-value=34 Score=30.39 Aligned_cols=31 Identities=19% Similarity=0.332 Sum_probs=25.7
Q ss_pred CCEEEEEcC-CCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 10 HPHVALIPS-AGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 10 ~~~il~~~~-~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
.|+|.|+.. +..| ..+|+.|+++||+|+++.
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~ 42 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHDSAHHLAAIE 42 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHHSSSEEEEEC
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEE
Confidence 369999988 7776 568899999999999764
No 165
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=35.50 E-value=27 Score=31.70 Aligned_cols=38 Identities=11% Similarity=0.126 Sum_probs=23.9
Q ss_pred hhhhhcCCCCcEEEEcCCChhhhHHHHHhcCCCeEEEe
Q 012061 102 LLAPLLSPPLSALITDVTLISAVLPVTINLHLPNYVLF 139 (472)
Q Consensus 102 ~~~~ll~~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~ 139 (472)
.++.+++++||+||...........--++.|||++.+.
T Consensus 76 n~E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~ 113 (326)
T 3psh_A 76 NIESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAIS 113 (326)
T ss_dssp CHHHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEEC
T ss_pred CHHHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEe
Confidence 33444447999999876222223344567899988774
No 166
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=35.35 E-value=1.7e+02 Score=28.57 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=24.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCC
Q 012061 12 HVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPT 49 (472)
Q Consensus 12 ~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~ 49 (472)
+++++. .-.-.+.|++.|.+.|-+|+.+.....
T Consensus 362 rv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~~ 394 (519)
T 1qgu_B 362 KFGLYG-----DPDFVMGLTRFLLELGCEPTVILSHNA 394 (519)
T ss_dssp EEEEES-----CHHHHHHHHHHHHHTTCEEEEEEETTC
T ss_pred EEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeCCC
Confidence 677773 344567888999999999987766543
No 167
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=35.30 E-value=28 Score=31.58 Aligned_cols=37 Identities=11% Similarity=-0.009 Sum_probs=27.8
Q ss_pred EEEEcCCCccChH--------------HHHHHHHHHHhCCCeEEEEEcCCC
Q 012061 13 VALIPSAGMGHLT--------------PFLRLAASLVQHHCRVTLITTYPT 49 (472)
Q Consensus 13 il~~~~~~~GHi~--------------P~l~La~~L~~rGh~Vt~~~~~~~ 49 (472)
|++.+.|++=.+. --.+||+++.++|++||+++.+..
T Consensus 40 VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 40 VLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp EEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred EEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 6666666654441 456889999999999999987643
No 168
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=35.25 E-value=25 Score=32.27 Aligned_cols=32 Identities=13% Similarity=0.239 Sum_probs=27.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
.|+|+++..++.| ..+|..|++.||+|+++..
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLAR 34 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECC
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 4789999988877 4678999999999999964
No 169
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=35.11 E-value=40 Score=27.77 Aligned_cols=36 Identities=14% Similarity=0.140 Sum_probs=28.8
Q ss_pred EEEEEcCC---CccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 12 HVALIPSA---GMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 12 ~il~~~~~---~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
+|+|+|.= ..=-.++...|++.|.++|.+|.|..++
T Consensus 48 ~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 48 KVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp EEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 68888752 1124678999999999999999999887
No 170
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=35.03 E-value=24 Score=33.11 Aligned_cols=30 Identities=20% Similarity=0.360 Sum_probs=24.1
Q ss_pred cCcCcEEeecCcchHHHHHHh----CC-cEEecCC
Q 012061 355 RAVGGFVSHGGWNSLVEAARH----GV-PLLVWPH 384 (472)
Q Consensus 355 ~~~~~~I~HgG~~s~~eal~~----Gv-P~l~~P~ 384 (472)
..++++|+=||-||++.++.. ++ |++.+..
T Consensus 113 ~~~DlVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 113 NRTDLLVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp HHCSEEEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred cCCCEEEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 346779999999999999764 57 7888863
No 171
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=34.94 E-value=26 Score=32.12 Aligned_cols=37 Identities=5% Similarity=0.025 Sum_probs=24.4
Q ss_pred hhhhcCCCCcEEEEcCCChhhhHHHHHhcCCCeEEEeC
Q 012061 103 LAPLLSPPLSALITDVTLISAVLPVTINLHLPNYVLFT 140 (472)
Q Consensus 103 ~~~ll~~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~ 140 (472)
++.++.++||+||... ...-...--++.|||++.+..
T Consensus 109 ~E~i~al~PDLIi~~~-~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 109 TEACVAATPDVVFLPM-KLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp HHHHHHTCCSEEEEEG-GGHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHhcCCCEEEEeC-cchhHHHHHHHcCCCEEEEcC
Confidence 3444447999999877 433334445677999887743
No 172
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=34.85 E-value=18 Score=32.73 Aligned_cols=33 Identities=21% Similarity=0.249 Sum_probs=27.1
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC-----C-CeEEEEEc
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQH-----H-CRVTLITT 46 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~r-----G-h~Vt~~~~ 46 (472)
.+|+|.|+..+..|. .+|..|++. | |+|+++..
T Consensus 7 ~~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CCEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 458999999888884 568888888 9 99998854
No 173
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=34.82 E-value=2.6e+02 Score=25.34 Aligned_cols=107 Identities=14% Similarity=0.153 Sum_probs=61.8
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHHhC--CCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHh
Q 012061 275 SVVYVSFGSRLALSMEQTKELGDGLLSS--GCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVL 352 (472)
Q Consensus 275 ~~v~vs~GS~~~~~~~~~~~~~~al~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll 352 (472)
.+.+|+.|.++ ...+.++.+. +..++.+... +.+.. +.+.+. -++ ..+-+..++|
T Consensus 15 rvgiiG~G~~g-------~~~~~~l~~~~~~~~lvav~d~------~~~~~-----~~~~~~---~~~--~~~~~~~~ll 71 (354)
T 3q2i_A 15 RFALVGCGRIA-------NNHFGALEKHADRAELIDVCDI------DPAAL-----KAAVER---TGA--RGHASLTDML 71 (354)
T ss_dssp EEEEECCSTTH-------HHHHHHHHHTTTTEEEEEEECS------SHHHH-----HHHHHH---HCC--EEESCHHHHH
T ss_pred eEEEEcCcHHH-------HHHHHHHHhCCCCeEEEEEEcC------CHHHH-----HHHHHH---cCC--ceeCCHHHHh
Confidence 47889998875 2345666655 4555555544 11111 111111 233 3466788888
Q ss_pred cccCcCcEEeecCcc----hHHHHHHhCCcEEec-CCccc--c-hhhHHHHHhhCeeeEE
Q 012061 353 SHRAVGGFVSHGGWN----SLVEAARHGVPLLVW-PHFGD--Q-KINAEAVERAGLGMWV 404 (472)
Q Consensus 353 ~~~~~~~~I~HgG~~----s~~eal~~GvP~l~~-P~~~D--Q-~~na~~v~~~G~G~~l 404 (472)
..+++++++--.-.. -+.+++.+|++++|= |+..+ + ..-.+.+++.|+-+.+
T Consensus 72 ~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v 131 (354)
T 3q2i_A 72 AQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFV 131 (354)
T ss_dssp HHCCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred cCCCCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEE
Confidence 877888887644433 466788999998884 66533 2 2333344555766665
No 174
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=34.71 E-value=64 Score=27.36 Aligned_cols=40 Identities=3% Similarity=-0.143 Sum_probs=26.0
Q ss_pred hhhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeCc
Q 012061 102 LLAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYVLFTA 141 (472)
Q Consensus 102 ~~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~ 141 (472)
.+.+.++ .++|+||+-.|.-.-...+-+.....++-++++
T Consensus 74 ~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 74 TLQKTIDHYDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp HHHHHHHTTCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred HHHHHHHhcCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 4445666 799999998744444555666666666665544
No 175
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=34.68 E-value=28 Score=30.99 Aligned_cols=31 Identities=19% Similarity=0.237 Sum_probs=25.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
+|+|.|+..+..|. .+|+.|.+.||+|+++.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 47999998888774 57888999999998764
No 176
>3bzy_A ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3bzl_A 3bzv_A 3bzx_A 3bzo_A 3bzz_A 3c03_B 3c00_A
Probab=34.61 E-value=87 Score=19.85 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=29.9
Q ss_pred cCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012061 412 ELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARK 446 (472)
Q Consensus 412 ~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~ 446 (472)
.-+.|.+++.+..++--+||.++.+-++++.++..
T Consensus 4 ~lkMskqEvK~E~Ke~EGdP~iK~r~R~~~re~a~ 38 (54)
T 3bzy_A 4 MASMSKDEVKREAKDTDGNPEIKGERRRLHSEIQS 38 (54)
T ss_pred hcCCCHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 44678899999999999999999998888888764
No 177
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=34.55 E-value=32 Score=28.78 Aligned_cols=31 Identities=23% Similarity=0.265 Sum_probs=24.0
Q ss_pred CEEEEEc-CCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 11 PHVALIP-SAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 11 ~~il~~~-~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
|+|+++. .+..| ..+++.|.++||+|+++..
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEES
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 5788886 55555 4678999999999998754
No 178
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=34.48 E-value=56 Score=30.18 Aligned_cols=32 Identities=25% Similarity=0.399 Sum_probs=23.0
Q ss_pred HhcccCcCcEEeecCcchH---HHHHHhCCcEEec
Q 012061 351 VLSHRAVGGFVSHGGWNSL---VEAARHGVPLLVW 382 (472)
Q Consensus 351 ll~~~~~~~~I~HgG~~s~---~eal~~GvP~l~~ 382 (472)
++..-+-+++|++||+-+. ..|-..|+|.++.
T Consensus 87 ~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 87 VIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 4444455669999998765 5567789999863
No 179
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=34.32 E-value=57 Score=27.11 Aligned_cols=33 Identities=18% Similarity=0.163 Sum_probs=23.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
|+|+++.. .|.+ -..|++.|.++||+|+.++-.
T Consensus 1 MkvlVtGa--tG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGA--TGRA--GSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETT--TSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcC--Cchh--HHHHHHHHHhCCCEEEEEEcC
Confidence 57766643 2333 258899999999999988643
No 180
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=34.31 E-value=21 Score=31.11 Aligned_cols=38 Identities=11% Similarity=0.148 Sum_probs=23.6
Q ss_pred hhhhcCCCCcEEEEcCCChhhhHHHHHhcCCCeEEEeC
Q 012061 103 LAPLLSPPLSALITDVTLISAVLPVTINLHLPNYVLFT 140 (472)
Q Consensus 103 ~~~ll~~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~ 140 (472)
++.++.++||+||............-++.|||++.+..
T Consensus 53 ~E~i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 53 VEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp HHHHHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred HHHHHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 33444479999998652222233455678999887643
No 181
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=34.18 E-value=1.5e+02 Score=25.52 Aligned_cols=37 Identities=5% Similarity=0.003 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccCh-HHHHHHHHHHHhCCCeEEEEEcC
Q 012061 11 PHVALIPSAGMGHL-TPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 11 ~~il~~~~~~~GHi-~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
|||+++-.-+.-++ ..+...++.++..|.+|.+++.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 56666655444444 56667788777778888887754
No 182
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=34.11 E-value=42 Score=27.72 Aligned_cols=36 Identities=14% Similarity=0.150 Sum_probs=29.0
Q ss_pred EEEEEcCC---CccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 12 HVALIPSA---GMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 12 ~il~~~~~---~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
+|+|+|.= ..=-.++...|++.|.++|.+|.|..++
T Consensus 47 ~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 47 SIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp EEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred eEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 68888752 1124688999999999999999999887
No 183
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=34.08 E-value=24 Score=32.31 Aligned_cols=40 Identities=20% Similarity=0.179 Sum_probs=27.2
Q ss_pred CCCCCCCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCC-eEEEEEc
Q 012061 1 MSDSGGFDSHPHVALIPSAGMGHLTPFLRLAASLVQHHC-RVTLITT 46 (472)
Q Consensus 1 ~~~~~~~~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh-~Vt~~~~ 46 (472)
|+.+ ...++|+|.++..++.|.- ||..|+..|| +|+++-.
T Consensus 1 ~~~~-~~~~~~kI~VIGaG~vG~~-----lA~~la~~g~~~V~L~D~ 41 (331)
T 1pzg_A 1 MAPA-LVQRRKKVAMIGSGMIGGT-----MGYLCALRELADVVLYDV 41 (331)
T ss_dssp --CC-CCSCCCEEEEECCSHHHHH-----HHHHHHHHTCCEEEEECS
T ss_pred CCcC-cCCCCCEEEEECCCHHHHH-----HHHHHHhCCCCeEEEEEC
Confidence 4443 3334589999976555543 8999999999 9877744
No 184
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=34.05 E-value=38 Score=27.88 Aligned_cols=42 Identities=12% Similarity=0.203 Sum_probs=32.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccch
Q 012061 12 HVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAE 54 (472)
Q Consensus 12 ~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 54 (472)
||++.-.++.|=+ =...|.+.|.++|++|.++.++.-...+.
T Consensus 4 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 45 (181)
T 1g63_A 4 KLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFIN 45 (181)
T ss_dssp CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSC
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 6777777775555 67899999999999999999875444443
No 185
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=33.61 E-value=1.5e+02 Score=26.68 Aligned_cols=33 Identities=9% Similarity=-0.075 Sum_probs=23.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
|||+|+..|. ......++|.++||+|..+.+.+
T Consensus 1 mrivf~gt~~-----fa~~~L~~L~~~~~~i~~Vvt~~ 33 (305)
T 2bln_A 1 MKTVVFAYHD-----MGCLGIEALLAAGYEISAIFTHT 33 (305)
T ss_dssp CEEEEEECHH-----HHHHHHHHHHHTTCEEEEEECCC
T ss_pred CEEEEEEcCH-----HHHHHHHHHHHCCCcEEEEEcCC
Confidence 6888886542 23455677888899998777654
No 186
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=33.45 E-value=49 Score=27.27 Aligned_cols=37 Identities=19% Similarity=0.299 Sum_probs=30.1
Q ss_pred CEEEEEc--CCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 11 PHVALIP--SAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 11 ~~il~~~--~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
|+++.+. -++-|=..-...||..|+++|++|.++-..
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 4555444 378899999999999999999999999654
No 187
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=33.37 E-value=1.7e+02 Score=26.49 Aligned_cols=30 Identities=20% Similarity=0.204 Sum_probs=24.5
Q ss_pred CcCcEEeecCcchHHHHHH--------hCCcEEecCCc
Q 012061 356 AVGGFVSHGGWNSLVEAAR--------HGVPLLVWPHF 385 (472)
Q Consensus 356 ~~~~~I~HgG~~s~~eal~--------~GvP~l~~P~~ 385 (472)
.++++|.-||-||+.|++. .++|+.++|..
T Consensus 82 ~~d~vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 82 GVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp TCSEEEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred CCCEEEEEccchHHHHHHHHHhhcccCCCCeEEEecCc
Confidence 3567999999999999863 56798999974
No 188
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=33.26 E-value=29 Score=29.39 Aligned_cols=33 Identities=24% Similarity=0.340 Sum_probs=24.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
+.|+|+++..+..| ..+++.|.+.||+|+++..
T Consensus 27 ~~~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 27 EAPKVGILGSGDFA-----RSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp --CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 45789999766555 4578899999999998753
No 189
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=33.18 E-value=1.6e+02 Score=27.04 Aligned_cols=109 Identities=17% Similarity=0.166 Sum_probs=61.4
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcc
Q 012061 275 SVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSH 354 (472)
Q Consensus 275 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~ 354 (472)
.+..|+.|.... ..++.++...+.+++-+.... .+.. ..+.+.. +. ..-+-+..++|..
T Consensus 28 rvgiiG~G~~~~------~~~~~~~~~~~~~lvav~d~~------~~~a-----~~~a~~~--~~--~~~~~~~~~ll~~ 86 (361)
T 3u3x_A 28 RFAAVGLNHNHI------YGQVNCLLRAGARLAGFHEKD------DALA-----AEFSAVY--AD--ARRIATAEEILED 86 (361)
T ss_dssp EEEEECCCSTTH------HHHHHHHHHTTCEEEEEECSC------HHHH-----HHHHHHS--SS--CCEESCHHHHHTC
T ss_pred EEEEECcCHHHH------HHHHHHhhcCCcEEEEEEcCC------HHHH-----HHHHHHc--CC--CcccCCHHHHhcC
Confidence 378888886531 224444555677776666541 1111 1122221 11 2235678899988
Q ss_pred cCcCcEEeecCcc----hHHHHHHhCCcEEe-cCCccc--c-hhhHHHHHhhCeeeEE
Q 012061 355 RAVGGFVSHGGWN----SLVEAARHGVPLLV-WPHFGD--Q-KINAEAVERAGLGMWV 404 (472)
Q Consensus 355 ~~~~~~I~HgG~~----s~~eal~~GvP~l~-~P~~~D--Q-~~na~~v~~~G~G~~l 404 (472)
+++++++--.-.. -+.+|+.+|++++| =|+..+ + ..-.+.+++.|+-+.+
T Consensus 87 ~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v 144 (361)
T 3u3x_A 87 ENIGLIVSAAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFSI 144 (361)
T ss_dssp TTCCEEEECCCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEEE
T ss_pred CCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 8899888655433 46788999999888 476543 2 1222223444655554
No 190
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=33.12 E-value=62 Score=24.11 Aligned_cols=64 Identities=11% Similarity=0.104 Sum_probs=43.9
Q ss_pred cCcCcEEeecCcch---------HHHHHHhCCcEEecCCcccchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHHHH
Q 012061 355 RAVGGFVSHGGWNS---------LVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLKIK 425 (472)
Q Consensus 355 ~~~~~~I~HgG~~s---------~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~ 425 (472)
..++++|--+|..| +-.|...|+|++.+=.++.+. .-..+++.+.-++- .+.+.|.++|+
T Consensus 37 ~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~a~~iV~----------Wn~~~I~~aI~ 105 (111)
T 1eiw_A 37 EDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAVSSEVVG----------WNPHCIRDALE 105 (111)
T ss_dssp SSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHHCSEEEC----------SCHHHHHHHHH
T ss_pred ccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhhCceecc----------CCHHHHHHHHH
Confidence 34566999999888 667888999999986666541 22224444443332 47899999998
Q ss_pred HHhc
Q 012061 426 DLMA 429 (472)
Q Consensus 426 ~~l~ 429 (472)
..++
T Consensus 106 ~~~~ 109 (111)
T 1eiw_A 106 DALD 109 (111)
T ss_dssp HHHC
T ss_pred hccC
Confidence 8763
No 191
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=32.87 E-value=34 Score=29.67 Aligned_cols=37 Identities=14% Similarity=0.028 Sum_probs=24.5
Q ss_pred hhhhhcCCCCcEEEEcCCChh--hhHHHHHhcCCCeEEEe
Q 012061 102 LLAPLLSPPLSALITDVTLIS--AVLPVTINLHLPNYVLF 139 (472)
Q Consensus 102 ~~~~ll~~~~D~vI~D~~~~~--~~~~vA~~lgIP~v~~~ 139 (472)
.++.+++++||+||... ... -...--++.|||++.+.
T Consensus 51 n~E~i~~l~PDlIi~~~-~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 51 NAEGILAMKPTMLLVSE-LAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CHHHHHTTCCSEEEEET-TCSCHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHccCCCEEEEcC-CcCchhHHHHHHHcCCcEEEeC
Confidence 44455558999999887 431 23344467799988763
No 192
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=32.82 E-value=25 Score=31.99 Aligned_cols=31 Identities=26% Similarity=0.347 Sum_probs=25.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
|+|.|+..+..| ..+|..|+++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 689999888777 4578999999999998854
No 193
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=32.65 E-value=49 Score=24.32 Aligned_cols=35 Identities=11% Similarity=0.142 Sum_probs=25.2
Q ss_pred CcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCC
Q 012061 414 RAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGG 452 (472)
Q Consensus 414 ~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g 452 (472)
.++++++.+...++ ...+.+++-|.+++... .+|+
T Consensus 2 ~~~~eq~~k~~~el---~~v~~n~~lL~EML~~~-~p~~ 36 (103)
T 1wrd_A 2 PLGSEQIGKLRSEL---EMVSGNVRVMSEMLTEL-VPTQ 36 (103)
T ss_dssp CSSSTTHHHHHHHH---HHHHHHHHHHHHHHHHS-CTTT
T ss_pred CCCHHHHHHHHHHH---HHHHHHHHHHHHHHHhc-CCCC
Confidence 35677777777776 66788888888888774 5554
No 194
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=32.30 E-value=64 Score=26.92 Aligned_cols=32 Identities=13% Similarity=0.119 Sum_probs=23.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
|+|+++.. .|.+ -..|++.|.++||+|+.++-
T Consensus 1 MkilVtGa--tG~i--G~~l~~~L~~~g~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVLGA--TGRA--GSAIVAEARRRGHEVLAVVR 32 (224)
T ss_dssp CEEEEETT--TSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEcC--CCHH--HHHHHHHHHHCCCEEEEEEe
Confidence 57666543 2433 36889999999999998864
No 195
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=32.29 E-value=38 Score=30.62 Aligned_cols=32 Identities=9% Similarity=0.045 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
+|+|+++..+ ....+++++.++||+|.++.+.
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECC
Confidence 4789998876 5678999999999999988654
No 196
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=31.93 E-value=39 Score=28.51 Aligned_cols=43 Identities=19% Similarity=0.175 Sum_probs=31.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEEcCCCCccc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQ-HHCRVTLITTYPTVSLA 53 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~-rGh~Vt~~~~~~~~~~~ 53 (472)
..||++.-.++.+=+ -...|.+.|.+ +|++|.++.++.-...+
T Consensus 19 ~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~fi 62 (206)
T 1qzu_A 19 KFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKHFY 62 (206)
T ss_dssp SEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGGSS
T ss_pred CCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHHHh
Confidence 357888888886644 56999999999 89999999987544443
No 197
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=31.83 E-value=2.9e+02 Score=24.91 Aligned_cols=107 Identities=15% Similarity=0.186 Sum_probs=60.4
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHHhC-CCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhc
Q 012061 275 SVVYVSFGSRLALSMEQTKELGDGLLSS-GCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLS 353 (472)
Q Consensus 275 ~~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~ 353 (472)
.+.+|+.|.++ ...+.+|.+. +..++.+... +.+.. ..+.+. -++ ..+-+..+++.
T Consensus 6 rvgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~------~~~~~-----~~~a~~---~g~--~~~~~~~~~l~ 62 (344)
T 3euw_A 6 RIALFGAGRIG-------HVHAANIAANPDLELVVIADP------FIEGA-----QRLAEA---NGA--EAVASPDEVFA 62 (344)
T ss_dssp EEEEECCSHHH-------HHHHHHHHHCTTEEEEEEECS------SHHHH-----HHHHHT---TTC--EEESSHHHHTT
T ss_pred EEEEECCcHHH-------HHHHHHHHhCCCcEEEEEECC------CHHHH-----HHHHHH---cCC--ceeCCHHHHhc
Confidence 37788888764 2355566554 4555555544 11111 111111 232 24567788888
Q ss_pred ccCcCcEEeecCcch----HHHHHHhCCcEEec-CCcccch---hhHHHHHhhCeeeEE
Q 012061 354 HRAVGGFVSHGGWNS----LVEAARHGVPLLVW-PHFGDQK---INAEAVERAGLGMWV 404 (472)
Q Consensus 354 ~~~~~~~I~HgG~~s----~~eal~~GvP~l~~-P~~~DQ~---~na~~v~~~G~G~~l 404 (472)
.+.+++++--.-... +.+++.+|++++|= |+..+-. .-...+++.|+-+.+
T Consensus 63 ~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v 121 (344)
T 3euw_A 63 RDDIDGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVML 121 (344)
T ss_dssp CSCCCEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEE
T ss_pred CCCCCEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEe
Confidence 778888886665554 67789999998874 6554322 223334455665555
No 198
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=31.67 E-value=66 Score=23.70 Aligned_cols=36 Identities=17% Similarity=0.172 Sum_probs=29.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEE
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLI 44 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~ 44 (472)
+.|+|++++..+.|+-.-.-.|-+.+.++|.++.+-
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~ 38 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIE 38 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEE
Confidence 458999999999888866677888888899887654
No 199
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=31.64 E-value=2.7e+02 Score=24.62 Aligned_cols=55 Identities=11% Similarity=0.072 Sum_probs=32.7
Q ss_pred HHhCCcEEecCCccc------------c----hhhHHHHHhhCe-eeEEee--c---CC-CCcCCcCHHHHHHHHHHH
Q 012061 373 ARHGVPLLVWPHFGD------------Q----KINAEAVERAGL-GMWVRS--W---GW-GTELRAKGDEIGLKIKDL 427 (472)
Q Consensus 373 l~~GvP~l~~P~~~D------------Q----~~na~~v~~~G~-G~~l~~--~---~~-~~~~~~~~~~l~~~i~~~ 427 (472)
+.+|+|+++-|-+.= | +.-|+....+|+ |+.+.. . .+ +....++++++.+.++++
T Consensus 192 ~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H~~pd~al~D~~~sl~p~el~~lv~~i 269 (285)
T 3sz8_A 192 TTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAHPDPDRARCDGPSALPLHQLEGLLSQM 269 (285)
T ss_dssp HTTSCCEEEETTTTCC---------------HHHHHHHHHHHCCSEEEEEEESCGGGCSCSSCCCEEGGGHHHHHHHH
T ss_pred hCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEeccChhccCCchhhccCHHHHHHHHHHH
Confidence 334899888776652 1 445666777787 555532 0 11 223457788887777665
No 200
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=31.52 E-value=35 Score=29.44 Aligned_cols=26 Identities=35% Similarity=0.358 Sum_probs=20.7
Q ss_pred ccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 21 MGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 21 ~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
.|.+ -.++|++|+++|++|++++.+.
T Consensus 28 SG~m--G~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHL--GKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHH--HHHHHHHHHHTTCEEEEEECTT
T ss_pred CCHH--HHHHHHHHHHCCCEEEEEeCCc
Confidence 4543 4678999999999999998763
No 201
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=31.39 E-value=35 Score=30.33 Aligned_cols=31 Identities=29% Similarity=0.414 Sum_probs=25.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
|+|.|+..+..| ..+|+.|+++||+|+++..
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNR 32 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 689999887766 5679999999999998743
No 202
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=31.33 E-value=45 Score=29.91 Aligned_cols=29 Identities=14% Similarity=0.314 Sum_probs=25.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 12 HVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 12 ~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
||.|+..+..|. .+|+.|.++||+|+++-
T Consensus 7 kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 7 KIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred cEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 799999999884 78999999999999863
No 203
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=31.10 E-value=2e+02 Score=26.35 Aligned_cols=32 Identities=19% Similarity=0.392 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCC-eEEEEEc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHC-RVTLITT 46 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh-~Vt~~~~ 46 (472)
..||+++..++.| ..+++.|+..|. +++++-.
T Consensus 118 ~~~VlvvG~GglG-----s~va~~La~aGvg~i~lvD~ 150 (353)
T 3h5n_A 118 NAKVVILGCGGIG-----NHVSVILATSGIGEIILIDN 150 (353)
T ss_dssp TCEEEEECCSHHH-----HHHHHHHHHHTCSEEEEEEC
T ss_pred CCeEEEECCCHHH-----HHHHHHHHhCCCCeEEEECC
Confidence 3589999998877 578999999996 7777743
No 204
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=31.04 E-value=40 Score=27.21 Aligned_cols=37 Identities=16% Similarity=0.151 Sum_probs=29.2
Q ss_pred EEEEEcCCC---ccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 12 HVALIPSAG---MGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 12 ~il~~~~~~---~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
+|+|+|.=+ .-=.++...|++.|.++|.+|.|..++-
T Consensus 32 ~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 32 SVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp EEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred eEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 688877521 1246799999999999999999998873
No 205
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=30.97 E-value=1.1e+02 Score=29.03 Aligned_cols=38 Identities=13% Similarity=0.066 Sum_probs=32.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEEcCCC
Q 012061 12 HVALIPSAGMGHLTPFLRLAASLVQ-HHCRVTLITTYPT 49 (472)
Q Consensus 12 ~il~~~~~~~GHi~P~l~La~~L~~-rGh~Vt~~~~~~~ 49 (472)
-+++..-|+.|=..-.+.+|...+. .|..|.+++.+-.
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~ 240 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMP 240 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSC
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCC
Confidence 4777888999999999999999987 5999999998744
No 206
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=30.66 E-value=47 Score=31.71 Aligned_cols=30 Identities=13% Similarity=0.092 Sum_probs=25.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
|+|.++..+..| ..+|..|+++||+|+++.
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d 30 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVD 30 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEE
Confidence 689999877776 578899999999999884
No 207
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=30.50 E-value=80 Score=26.98 Aligned_cols=31 Identities=13% Similarity=0.318 Sum_probs=25.9
Q ss_pred cCcCcEEeecCcchHHHHHHhCCcEEecCCcc
Q 012061 355 RAVGGFVSHGGWNSLVEAARHGVPLLVWPHFG 386 (472)
Q Consensus 355 ~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~ 386 (472)
..++.+|+.||........ .++|+|-++..+
T Consensus 62 ~~~dVIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 62 ERCDAIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp SCCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCCeEEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 3477899999999999875 689999999763
No 208
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=30.47 E-value=46 Score=27.75 Aligned_cols=38 Identities=3% Similarity=0.012 Sum_probs=31.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
..||++.-.++.|=+. ...|.+.|.++|++|.++.++.
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~ 45 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKT 45 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchh
Confidence 3488888888866665 7899999999999999998864
No 209
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=30.31 E-value=36 Score=31.90 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=26.4
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 7 FDSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 7 ~~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
..++++|+|+..+-.| +.+|..|+++|++|+++=
T Consensus 20 ~~~~~dV~IVGaG~aG-----l~~A~~La~~G~~V~v~E 53 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGG-----LSAAVALKQSGIDCDVYE 53 (407)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 3445789999877544 889999999999999994
No 210
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=30.24 E-value=1.3e+02 Score=22.88 Aligned_cols=53 Identities=13% Similarity=0.184 Sum_probs=31.9
Q ss_pred hCCcEEecCCcccchhhHHHHHhhC-eeeEEeecCCCCcCCcCHHHHHHHHHHHhcCHHHHH
Q 012061 375 HGVPLLVWPHFGDQKINAEAVERAG-LGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLRE 435 (472)
Q Consensus 375 ~GvP~l~~P~~~DQ~~na~~v~~~G-~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 435 (472)
..+|+|++--..+ ........+.| +--.+ .+.++.++|..+|+.++....+++
T Consensus 78 ~~~~ii~ls~~~~-~~~~~~~~~~g~~~~~l-------~kP~~~~~L~~~i~~~~~~~~~~~ 131 (154)
T 2rjn_A 78 PDIERVVISGYAD-AQATIDAVNRGKISRFL-------LKPWEDEDVFKVVEKGLQLAFLRE 131 (154)
T ss_dssp TTSEEEEEECGGG-HHHHHHHHHTTCCSEEE-------ESSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCC-HHHHHHHHhccchheee-------eCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3678777643333 33444455555 53344 134789999999999986444433
No 211
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=30.15 E-value=40 Score=29.20 Aligned_cols=38 Identities=18% Similarity=-0.062 Sum_probs=24.0
Q ss_pred hhhhhcCCCCcEEEEcCCCh-hhhHHHHHhcCCCeEEEe
Q 012061 102 LLAPLLSPPLSALITDVTLI-SAVLPVTINLHLPNYVLF 139 (472)
Q Consensus 102 ~~~~ll~~~~D~vI~D~~~~-~~~~~vA~~lgIP~v~~~ 139 (472)
.++.++.++||+||...... .....--++.|||++.+.
T Consensus 51 n~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 51 SSEGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp CHHHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 44455557999999876211 223344467899987763
No 212
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=30.10 E-value=87 Score=28.56 Aligned_cols=35 Identities=17% Similarity=0.058 Sum_probs=24.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
.+|||+|+. --+....+.++|.++||+|..+.+.+
T Consensus 21 ~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~p 55 (329)
T 2bw0_A 21 QSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVP 55 (329)
T ss_dssp CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred CCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 358999993 22333456788999999998777643
No 213
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=30.08 E-value=28 Score=31.44 Aligned_cols=32 Identities=22% Similarity=0.186 Sum_probs=26.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
+|+|+++..++.|- .+|..|+ .||+|+++...
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECC
Confidence 47999999998885 6788899 99999999654
No 214
>2wam_A RV2714, conserved hypothetical alanine and leucine rich protein; unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=29.98 E-value=3.3e+02 Score=24.99 Aligned_cols=172 Identities=14% Similarity=0.120 Sum_probs=81.1
Q ss_pred CceEEEeecccccCC-HHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHh
Q 012061 274 GSVVYVSFGSRLALS-MEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVL 352 (472)
Q Consensus 274 ~~~v~vs~GS~~~~~-~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll 352 (472)
++++++ .|-.-... .++...+++-.++.+++-++.+++ +|.+.. ..++..+. .......++
T Consensus 142 ~~~LlL-~G~eP~~~w~~fa~~vl~~a~~~gV~~vvtLgg--------------lp~~vp-htRp~~V~--~~at~~el~ 203 (351)
T 2wam_A 142 TPFLLL-AGLEPDLKWERFITAVRLLAERLGVRQTIGLGT--------------VPMAVP-HTRPITMT--AHSNNRELI 203 (351)
T ss_dssp CEEEEE-EEECCSBCHHHHHHHHHHHHHHTTCCEEEEEEE--------------EEESCC-TTSCCCEE--EEESSGGGG
T ss_pred CcEEEE-ECCCChhHHHHHHHHHHHHHHHhCCCEEEEEec--------------ccCCCC-CccCcceE--EEECCHHHH
Confidence 334444 45553333 666777888888899988887775 221000 00001111 111122222
Q ss_pred cccC--cCcEEeecCcchHH--HHHHhCCcEEec----CCcccc---hhhHHHH-Hhh-C-eeeEEeecCCCCcCCcCHH
Q 012061 353 SHRA--VGGFVSHGGWNSLV--EAARHGVPLLVW----PHFGDQ---KINAEAV-ERA-G-LGMWVRSWGWGTELRAKGD 418 (472)
Q Consensus 353 ~~~~--~~~~I~HgG~~s~~--eal~~GvP~l~~----P~~~DQ---~~na~~v-~~~-G-~G~~l~~~~~~~~~~~~~~ 418 (472)
..-. ..-+-.-+|..+++ ++...|+|.+++ |...=| |.-|..+ +.+ . .|+.++. +.-.-.++
T Consensus 204 ~~~~~~~~~~~gp~GisglL~~~~~~~Gi~a~~l~~~vP~Yla~~pdP~AA~alL~~L~~llgl~ip~----~~L~e~Ae 279 (351)
T 2wam_A 204 SDFQPSISEIQVPGSASNLLEYRMAQHGHEVVGFTVHVPHYLTQTDYPAAAQALLEQVAKTGSLQLPL----AVLAEAAA 279 (351)
T ss_dssp TTSCCCCCSEEEECCHHHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHTCCCCC----HHHHHHHH
T ss_pred HhcCCccCcccccccHHHHHHHHHHHcCCCEEEEEEeCCccccCCCCHHHHHHHHHHHHHHHCCCCCH----HHHHHHHH
Confidence 1111 11123345554444 567789999987 554222 3334333 222 1 3555511 22223467
Q ss_pred HHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcc----------C--CChHHHHHHHHHHHHh
Q 012061 419 EIGLKIKDLMA-NDFLREQAKRIEEEARKAIGV----------G--GSSERTFKELIDKWKC 467 (472)
Q Consensus 419 ~l~~~i~~~l~-~~~~~~~a~~l~~~~~~~~~~----------~--g~~~~~~~~~~~~~~~ 467 (472)
++.+.|+++.+ |+++.+-++.|-+........ . -+++...++|-++|.+
T Consensus 280 ~ie~~i~el~~~~~e~~~~V~~LE~qyD~~~~~~~~~~l~~~~~~~ps~dei~~efErfL~~ 341 (351)
T 2wam_A 280 EVQAKIDEQVQASAEVAQVVAALERQYDAFIDAQENRSLLTRDEDLPSGDELGAEFERFLAQ 341 (351)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHTTC-------------CHHHHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHhhhchhhhhcccccccccccCCCCHHHHHHHHHHHHHh
Confidence 78888888886 666666555554443322111 1 2355556666666653
No 215
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=29.98 E-value=44 Score=28.85 Aligned_cols=33 Identities=21% Similarity=0.267 Sum_probs=26.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
..++|.|+..+..| ..||+.|+++||+|++...
T Consensus 18 ~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r 50 (245)
T 3dtt_A 18 QGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTR 50 (245)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 35799999877766 4679999999999998854
No 216
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=29.89 E-value=30 Score=31.35 Aligned_cols=33 Identities=12% Similarity=0.096 Sum_probs=26.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCC-eEEEEEc
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHC-RVTLITT 46 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh-~Vt~~~~ 46 (472)
+.|+|.|+..+..| ..+|+.|++.|| +|+++..
T Consensus 23 ~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 23 NAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 45799999888877 478999999999 9998744
No 217
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=29.82 E-value=2.3e+02 Score=25.35 Aligned_cols=37 Identities=24% Similarity=0.446 Sum_probs=26.2
Q ss_pred CEEEEEcCCCcc---C--hHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 11 PHVALIPSAGMG---H--LTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 11 ~~il~~~~~~~G---H--i~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
..|++.|....+ . ..-+..|++.|.++|++|.++..+
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~ 222 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSA 222 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCG
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeCh
Confidence 357777765222 2 337889999999999998887554
No 218
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=29.57 E-value=36 Score=29.61 Aligned_cols=32 Identities=13% Similarity=0.161 Sum_probs=25.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
++|+|.|+..+..|. .+++.|.+.||+|+++.
T Consensus 2 ~~m~i~iiG~G~mG~-----~~a~~l~~~g~~v~~~~ 33 (259)
T 2ahr_A 2 NAMKIGIIGVGKMAS-----AIIKGLKQTPHELIISG 33 (259)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHTTSSCEEEEEC
T ss_pred CccEEEEECCCHHHH-----HHHHHHHhCCCeEEEEC
Confidence 358999998877663 57889999999988774
No 219
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=29.49 E-value=42 Score=28.51 Aligned_cols=40 Identities=3% Similarity=-0.164 Sum_probs=24.7
Q ss_pred hhhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeCc
Q 012061 102 LLAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYVLFTA 141 (472)
Q Consensus 102 ~~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~ 141 (472)
.+.+.++ .++|+||+-.|.-.-...+-+...-.++-++++
T Consensus 80 ~~~~~l~~~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 80 AITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp HHHHHHHTTCCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred HHHHHHHhhCCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
Confidence 4445666 899999987734344455555555556655444
No 220
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=29.49 E-value=58 Score=29.27 Aligned_cols=29 Identities=21% Similarity=0.356 Sum_probs=26.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEE
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLI 44 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~ 44 (472)
.+|.|+..+..|. .+|+.|.++||+|+++
T Consensus 4 ~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~ 32 (300)
T 3obb_A 4 KQIAFIGLGHMGA-----PMATNLLKAGYLLNVF 32 (300)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEeeehHHHH-----HHHHHHHhCCCeEEEE
Confidence 3799999999994 7899999999999988
No 221
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=29.44 E-value=55 Score=27.99 Aligned_cols=36 Identities=8% Similarity=0.018 Sum_probs=28.9
Q ss_pred CCEEEEEcC--CCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 10 HPHVALIPS--AGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 10 ~~~il~~~~--~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
+|+.++++. +.-|=..-...|++.|+++|++|.++=
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 455444444 577889999999999999999999984
No 222
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=29.35 E-value=80 Score=28.02 Aligned_cols=37 Identities=19% Similarity=-0.055 Sum_probs=23.1
Q ss_pred CCCCEEEEEc-CCCccChHHH--HHHHHHHHhCCCeEEEE
Q 012061 8 DSHPHVALIP-SAGMGHLTPF--LRLAASLVQHHCRVTLI 44 (472)
Q Consensus 8 ~~~~~il~~~-~~~~GHi~P~--l~La~~L~~rGh~Vt~~ 44 (472)
.++|||+++- .|-...++-. -...+.|.++||+|+++
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~ 59 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVS 59 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEE
Confidence 4568877664 3544444332 34567788899999988
No 223
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=29.24 E-value=38 Score=30.69 Aligned_cols=32 Identities=16% Similarity=0.161 Sum_probs=27.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCC-CeEEEEEc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHH-CRVTLITT 46 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rG-h~Vt~~~~ 46 (472)
.|+|.|+..+..| ..+|+.|++.| |+|+++..
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr 56 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDL 56 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeC
Confidence 3689999988877 78899999999 99998743
No 224
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=28.96 E-value=57 Score=29.83 Aligned_cols=39 Identities=26% Similarity=0.321 Sum_probs=33.5
Q ss_pred CEEEEEcC-CCccChHHHHHHHHHHHhCCCeEEEEEcCCC
Q 012061 11 PHVALIPS-AGMGHLTPFLRLAASLVQHHCRVTLITTYPT 49 (472)
Q Consensus 11 ~~il~~~~-~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~ 49 (472)
++|+|++. ++-|-..-..+||..|+++|++|.++...+.
T Consensus 16 ~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~ 55 (334)
T 3iqw_A 16 LRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPA 55 (334)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSS
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 46666665 8999999999999999999999999988743
No 225
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=28.89 E-value=62 Score=24.34 Aligned_cols=38 Identities=5% Similarity=-0.025 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCccCh--HHHHHHHHHHHhCC--CeEEEEEcC
Q 012061 10 HPHVALIPSAGMGHL--TPFLRLAASLVQHH--CRVTLITTY 47 (472)
Q Consensus 10 ~~~il~~~~~~~GHi--~P~l~La~~L~~rG--h~Vt~~~~~ 47 (472)
.|+++|+-+-..-.. +-.+.+|....++| |+|+++.-.
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G 48 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWG 48 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECS
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEEC
Confidence 377777666532222 33677888889999 899999654
No 226
>2cob_A LCOR protein; MLR2, KIAA1795, helix-turn-helix, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.1.15
Probab=28.86 E-value=70 Score=21.54 Aligned_cols=30 Identities=10% Similarity=0.085 Sum_probs=22.6
Q ss_pred CCcCCcCHHHHHHHHHHHhcCH-HHHHHHHH
Q 012061 410 GTELRAKGDEIGLKIKDLMAND-FLREQAKR 439 (472)
Q Consensus 410 ~~~~~~~~~~l~~~i~~~l~~~-~~~~~a~~ 439 (472)
+....-|.++|..||..+-++. ++++.|+.
T Consensus 9 ~ryr~Yte~~L~~Ai~aVr~g~mS~~~Aak~ 39 (70)
T 2cob_A 9 GRYRQYNSEILEEAISVVMSGKMSVSKAQSI 39 (70)
T ss_dssp SCSCCCCHHHHHHHHHHHHTTSSCHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHcCCccHHHHHHH
Confidence 4566789999999999998873 55555543
No 227
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=28.85 E-value=2e+02 Score=25.83 Aligned_cols=108 Identities=10% Similarity=0.059 Sum_probs=59.6
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHHhC-CCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhc
Q 012061 275 SVVYVSFGSRLALSMEQTKELGDGLLSS-GCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLS 353 (472)
Q Consensus 275 ~~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~ 353 (472)
.+.+|+.|.++ ...+.+|.+. +..++.+.... .. .. ..+.+. -++ ...+-+..++|.
T Consensus 7 ~igiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~---~~---~~-----~~~~~~---~~~-~~~~~~~~~ll~ 64 (330)
T 3e9m_A 7 RYGIMSTAQIV-------PRFVAGLRESAQAEVRGIASRR---LE---NA-----QKMAKE---LAI-PVAYGSYEELCK 64 (330)
T ss_dssp EEEECSCCTTH-------HHHHHHHHHSSSEEEEEEBCSS---SH---HH-----HHHHHH---TTC-CCCBSSHHHHHH
T ss_pred EEEEECchHHH-------HHHHHHHHhCCCcEEEEEEeCC---HH---HH-----HHHHHH---cCC-CceeCCHHHHhc
Confidence 36778888774 2355666664 44554444431 11 11 111111 122 124567788888
Q ss_pred ccCcCcEEeecCcch----HHHHHHhCCcEEec-CCccc--c-hhhHHHHHhhCeeeEE
Q 012061 354 HRAVGGFVSHGGWNS----LVEAARHGVPLLVW-PHFGD--Q-KINAEAVERAGLGMWV 404 (472)
Q Consensus 354 ~~~~~~~I~HgG~~s----~~eal~~GvP~l~~-P~~~D--Q-~~na~~v~~~G~G~~l 404 (472)
.+.+++++--.-... +.+++.+|++++|= |+..+ + ..-.+.+++.|+-+.+
T Consensus 65 ~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v 123 (330)
T 3e9m_A 65 DETIDIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLME 123 (330)
T ss_dssp CTTCSEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 778888886655554 67788999998873 65533 2 2223334455665555
No 228
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=28.54 E-value=48 Score=28.86 Aligned_cols=35 Identities=20% Similarity=0.244 Sum_probs=29.1
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 13 VALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 13 il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
|.+..-++-|=..-...||..|+++|++|.++=..
T Consensus 4 I~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 4 VAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 45555578899999999999999999999998544
No 229
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=28.42 E-value=1.4e+02 Score=20.37 Aligned_cols=47 Identities=19% Similarity=0.303 Sum_probs=30.5
Q ss_pred hCCcEEecCCcccchhhH-HHHH--hhCeeeEEeecCCCCcCCcCHHHHHHHHHHHh
Q 012061 375 HGVPLLVWPHFGDQKINA-EAVE--RAGLGMWVRSWGWGTELRAKGDEIGLKIKDLM 428 (472)
Q Consensus 375 ~GvP~l~~P~~~DQ~~na-~~v~--~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l 428 (472)
.|+|.+++--.+.|.+.- -.-+ +.|+..-+ ....++++|.+.+++.|
T Consensus 50 ngkplvvfvngasqndvnefqneakkegvsydv-------lkstdpeeltqrvrefl 99 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDV-------LKSTDPEELTQRVREFL 99 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEE-------EECCCHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhcCcchhh-------hccCCHHHHHHHHHHHH
Confidence 588888887766664433 2223 33666544 34468999998888876
No 230
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=28.35 E-value=37 Score=30.23 Aligned_cols=30 Identities=23% Similarity=0.380 Sum_probs=25.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
|+|.|+..+..|. .+|+.|.+.||+|+++.
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~ 30 (296)
T 2gf2_A 1 MPVGFIGLGNMGN-----PMAKNLMKHGYPLIIYD 30 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHTTCCEEEEC
T ss_pred CeEEEEeccHHHH-----HHHHHHHHCCCEEEEEe
Confidence 5799998888875 67899999999998774
No 231
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=28.22 E-value=44 Score=31.01 Aligned_cols=32 Identities=13% Similarity=0.168 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
.|+|.|+..+..| ..+|+.|+++||+|+++..
T Consensus 22 ~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 22 SMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 4799999887766 4789999999999998843
No 232
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=28.02 E-value=1.8e+02 Score=26.64 Aligned_cols=36 Identities=14% Similarity=0.201 Sum_probs=23.8
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeC
Q 012061 275 SVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKG 312 (472)
Q Consensus 275 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~ 312 (472)
.++++++|+.+- ..-...++++|.+.|.++.+....
T Consensus 6 ~il~~~~~~~Gh--v~~~~~La~~L~~~GheV~v~~~~ 41 (402)
T 3ia7_A 6 HILFANVQGHGH--VYPSLGLVSELARRGHRITYVTTP 41 (402)
T ss_dssp EEEEECCSSHHH--HHHHHHHHHHHHHTTCEEEEEECH
T ss_pred EEEEEeCCCCcc--cccHHHHHHHHHhCCCEEEEEcCH
Confidence 377777775432 233456888888888888776643
No 233
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=27.76 E-value=41 Score=29.87 Aligned_cols=31 Identities=26% Similarity=0.240 Sum_probs=25.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
|+|.|+..+..| ..+|+.|+++||+|+++..
T Consensus 2 ~~I~iiG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pdu_A 2 TTYGFLGLGIMG-----GPMAANLVRAGFDVTVWNR 32 (287)
T ss_dssp CCEEEECCSTTH-----HHHHHHHHHHTCCEEEECS
T ss_pred CeEEEEccCHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 579999888887 4578999999999998843
No 234
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=27.64 E-value=63 Score=29.40 Aligned_cols=36 Identities=11% Similarity=0.098 Sum_probs=24.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
++|+|+++.. .|.+ -..|++.|.++||+|+.++-..
T Consensus 9 ~~~~IlVtGa--tG~i--G~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 9 PKGRVLIAGA--TGFI--GQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp --CCEEEECT--TSHH--HHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCeEEEECC--CcHH--HHHHHHHHHHCCCCEEEEECCC
Confidence 3457777654 2433 3578899999999999887653
No 235
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=27.63 E-value=79 Score=29.04 Aligned_cols=38 Identities=18% Similarity=0.293 Sum_probs=32.9
Q ss_pred CEEEEEcC-CCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 11 PHVALIPS-AGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 11 ~~il~~~~-~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
.+|++++. ++-|-..-..+||..|+++|++|.++....
T Consensus 26 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 26 TKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp CEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 45666655 899999999999999999999999998875
No 236
>3c01_A Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=27.58 E-value=1.1e+02 Score=18.82 Aligned_cols=31 Identities=13% Similarity=0.239 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012061 416 KGDEIGLKIKDLMANDFLREQAKRIEEEARK 446 (472)
Q Consensus 416 ~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~ 446 (472)
|.+++.+..++--+||.++.+-++++.++..
T Consensus 2 skqEvK~E~Ke~EGdP~iK~~~R~~~~e~a~ 32 (48)
T 3c01_A 2 DKEEVKREMKEQEGNPEVKSKRREVHMEILS 32 (48)
T ss_pred CHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 5678888888888899999988888888664
No 237
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=27.55 E-value=76 Score=26.43 Aligned_cols=33 Identities=15% Similarity=0.092 Sum_probs=23.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
|+|+++.. .|-+ -..|++.|.++||+|+.++-.
T Consensus 1 M~ilItGa--tG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVGS--TGRV--GKSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEEST--TSHH--HHHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEECC--CCHH--HHHHHHHHHHCCCEEEEEECC
Confidence 57766643 2333 368899999999999988643
No 238
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=27.48 E-value=49 Score=29.45 Aligned_cols=31 Identities=10% Similarity=-0.022 Sum_probs=26.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
.+|+++..+..| +..|..|+++|++|+++-.
T Consensus 16 ~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~ 46 (323)
T 3f8d_A 16 FDVIIVGLGPAA-----YGAALYSARYMLKTLVIGE 46 (323)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred cCEEEECccHHH-----HHHHHHHHHCCCcEEEEec
Confidence 479999888766 7889999999999999954
No 239
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=27.37 E-value=1.5e+02 Score=24.95 Aligned_cols=39 Identities=5% Similarity=-0.061 Sum_probs=24.6
Q ss_pred hhhhcC-CCCcEEEEcCCChhhhHHHHHhcCCCeEEEeCc
Q 012061 103 LAPLLS-PPLSALITDVTLISAVLPVTINLHLPNYVLFTA 141 (472)
Q Consensus 103 ~~~ll~-~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~ 141 (472)
+.+.++ .+||+||+-.|.-.-...+-......++-+.++
T Consensus 71 ~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 71 IDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp HHHHHHHTTCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred HHHHHHhcCCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
Confidence 345566 799999987733334455556666666655444
No 240
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=27.29 E-value=72 Score=24.94 Aligned_cols=35 Identities=20% Similarity=0.257 Sum_probs=28.7
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 13 VALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 13 il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
.+++..+..-.+++.+.+|...++.|++|+++.+.
T Consensus 11 ~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~ 45 (144)
T 2qs7_A 11 SIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTF 45 (144)
T ss_dssp EEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEeh
Confidence 34444456788999999999999999999999775
No 241
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=27.15 E-value=46 Score=29.28 Aligned_cols=30 Identities=13% Similarity=0.171 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
|+|.|+..+..| ..+|+.|.+.||+|+++.
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~ 30 (279)
T 2f1k_A 1 MKIGVVGLGLIG-----ASLAGDLRRRGHYLIGVS 30 (279)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEcCcHHH-----HHHHHHHHHCCCEEEEEE
Confidence 689999877666 467899999999998874
No 242
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=27.13 E-value=14 Score=18.81 Aligned_cols=18 Identities=22% Similarity=0.521 Sum_probs=14.4
Q ss_pred CcchHHHHHHhCCcEEec
Q 012061 365 GWNSLVEAARHGVPLLVW 382 (472)
Q Consensus 365 G~~s~~eal~~GvP~l~~ 382 (472)
|.|+++..|+.|.|.++-
T Consensus 1 giGa~LKVLa~~LP~liS 18 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALIS 18 (26)
T ss_pred CchHHHHHHHccchHHHH
Confidence 678888899999887653
No 243
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=27.04 E-value=69 Score=26.81 Aligned_cols=34 Identities=18% Similarity=0.152 Sum_probs=24.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
+|+|+++. +.|.+ -..|++.|.++||+|+.++-.
T Consensus 4 m~~ilItG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLIG--ASGFV--GSALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEET--CCHHH--HHHHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEEc--CCchH--HHHHHHHHHHCCCEEEEEEcC
Confidence 36777664 33433 357899999999999988643
No 244
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=26.90 E-value=93 Score=27.08 Aligned_cols=41 Identities=20% Similarity=0.218 Sum_probs=30.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccc
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLA 53 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~ 53 (472)
|||++.-=-+. |--=+..|+++|.+.| +|+++.|...++..
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~ 42 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGV 42 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTS
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCC
Confidence 78888765543 3345788999999998 99999988655443
No 245
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=26.85 E-value=69 Score=27.11 Aligned_cols=33 Identities=24% Similarity=0.187 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
|++++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467777776643 346889999999999888754
No 246
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=26.84 E-value=68 Score=31.06 Aligned_cols=34 Identities=9% Similarity=0.091 Sum_probs=29.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC-CC-eEEEEEcC
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQH-HC-RVTLITTY 47 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~r-Gh-~Vt~~~~~ 47 (472)
+.|+|.++..+..| +.+|..|+++ || +|+++-..
T Consensus 17 ~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~ 52 (478)
T 3g79_A 17 PIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRN 52 (478)
T ss_dssp SCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCC
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECC
Confidence 45799999999888 5789999999 99 99998654
No 247
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=26.70 E-value=2.9e+02 Score=23.28 Aligned_cols=26 Identities=15% Similarity=0.169 Sum_probs=21.2
Q ss_pred CcEEeecCcchHHHHH---------HhCCcEEecC
Q 012061 358 GGFVSHGGWNSLVEAA---------RHGVPLLVWP 383 (472)
Q Consensus 358 ~~~I~HgG~~s~~eal---------~~GvP~l~~P 383 (472)
..++--||.||+-|.. .+++|++.+-
T Consensus 108 a~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~ 142 (216)
T 1ydh_A 108 AFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLN 142 (216)
T ss_dssp EEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEEC
T ss_pred EEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEec
Confidence 4577789999988876 4799999985
No 248
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=26.67 E-value=1.2e+02 Score=24.67 Aligned_cols=40 Identities=3% Similarity=0.131 Sum_probs=25.4
Q ss_pred CCCCCEEEEEc-CCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 7 FDSHPHVALIP-SAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 7 ~~~~~~il~~~-~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
+.+..+++++- ..+. .-.=+..-.+.|.+.|++|+++++.
T Consensus 4 m~~t~~~v~il~~~gF-e~~E~~~p~~~l~~ag~~V~~~s~~ 44 (177)
T 4hcj_A 4 MGKTNNILYVMSGQNF-QDEEYFESKKIFESAGYKTKVSSTF 44 (177)
T ss_dssp -CCCCEEEEECCSEEE-CHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccCCCEEEEECCCCc-cHHHHHHHHHHHHHCCCEEEEEECC
Confidence 34444555443 3333 3334666778889999999999875
No 249
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=26.62 E-value=37 Score=30.68 Aligned_cols=37 Identities=19% Similarity=0.161 Sum_probs=25.7
Q ss_pred CCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCC--eEEEEEcC
Q 012061 6 GFDSHPHVALIPSAGMGHLTPFLRLAASLVQHHC--RVTLITTY 47 (472)
Q Consensus 6 ~~~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh--~Vt~~~~~ 47 (472)
+..++|+|+++..++.|-. +|..|++.|| +|+++...
T Consensus 3 ~~~~~mkI~IiGaG~vG~~-----~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 3 TTVKPTKLAVIGAGAVGST-----LAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp ----CCEEEEECCSHHHHH-----HHHHHHHTTCCSEEEEECSS
T ss_pred cCCCCCEEEEECCCHHHHH-----HHHHHHhCCCCCEEEEEeCC
Confidence 3445689999987655543 7788999999 99988543
No 250
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=26.43 E-value=55 Score=25.46 Aligned_cols=34 Identities=12% Similarity=0.058 Sum_probs=28.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
-+++++..++ =+.|++.+++.|.++|.+|+++ ..
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~ 52 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HV 52 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-Ee
Confidence 3788887776 4899999999999999999998 54
No 251
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=26.36 E-value=38 Score=25.87 Aligned_cols=30 Identities=17% Similarity=0.167 Sum_probs=23.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 12 HVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 12 ~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
+|+++..+..| ..+++.|.++|++|+++..
T Consensus 8 ~v~I~G~G~iG-----~~~a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 8 QFAVIGLGRFG-----GSIVKELHRMGHEVLAVDI 37 (144)
T ss_dssp SEEEECCSHHH-----HHHHHHHHHTTCCCEEEES
T ss_pred cEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 68888765444 5678999999999998854
No 252
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=26.33 E-value=1.2e+02 Score=27.53 Aligned_cols=43 Identities=14% Similarity=0.167 Sum_probs=27.9
Q ss_pred CCCCCCCCCCCEEEEEcCCCccChHHHHHHHHHHHh--CCCeEEEEEcC
Q 012061 1 MSDSGGFDSHPHVALIPSAGMGHLTPFLRLAASLVQ--HHCRVTLITTY 47 (472)
Q Consensus 1 ~~~~~~~~~~~~il~~~~~~~GHi~P~l~La~~L~~--rGh~Vt~~~~~ 47 (472)
|..+...-+.|+|++.... |-+ -..|++.|.+ +||+|+.+.-.
T Consensus 1 M~~~~~~~~~~~vlVTGat--G~I--G~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 1 MRYIDDELENQTILITGGA--GFV--GSNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp CCSSSCCCTTCEEEEETTT--SHH--HHHHHHHHHHHCTTSEEEEEECC
T ss_pred CcccchhcCCCEEEEECCC--CHH--HHHHHHHHHhhCCCCeEEEEECC
Confidence 4444333445677766432 332 3578899999 99999998653
No 253
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=26.32 E-value=97 Score=25.29 Aligned_cols=33 Identities=18% Similarity=0.156 Sum_probs=22.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
++|+++++.. + |-+ -..+++.|+ +||+|+++.-
T Consensus 2 ~kM~vlVtGa-s-g~i--G~~~~~~l~-~g~~V~~~~r 34 (202)
T 3d7l_A 2 NAMKILLIGA-S-GTL--GSAVKERLE-KKAEVITAGR 34 (202)
T ss_dssp CSCEEEEETT-T-SHH--HHHHHHHHT-TTSEEEEEES
T ss_pred CCcEEEEEcC-C-cHH--HHHHHHHHH-CCCeEEEEec
Confidence 3578655543 2 333 467899999 9999998754
No 254
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=26.31 E-value=45 Score=32.32 Aligned_cols=32 Identities=22% Similarity=0.246 Sum_probs=27.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
.|+|.++..+..| +.+|..|+++||+|+++..
T Consensus 8 ~~~I~VIG~G~vG-----~~lA~~la~~G~~V~~~d~ 39 (478)
T 2y0c_A 8 SMNLTIIGSGSVG-----LVTGACLADIGHDVFCLDV 39 (478)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CceEEEECcCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 5899999888777 5689999999999999853
No 255
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=26.25 E-value=46 Score=31.99 Aligned_cols=31 Identities=23% Similarity=0.241 Sum_probs=26.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
|+|.++..+..| ..+|..|+++||+|+++..
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~ 33 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDT 33 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEEC
Confidence 799999887666 5789999999999998854
No 256
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=26.21 E-value=94 Score=27.87 Aligned_cols=37 Identities=14% Similarity=0.012 Sum_probs=28.5
Q ss_pred CCEEEEEcCCCccC----hHHHHHHHHHHHhCCCeEEEEEc
Q 012061 10 HPHVALIPSAGMGH----LTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 10 ~~~il~~~~~~~GH----i~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
++||+++..+..+- +.....++++|.++||+|+.+.+
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~ 53 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDP 53 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeC
Confidence 46888887754332 45678999999999999999864
No 257
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=26.16 E-value=43 Score=31.54 Aligned_cols=30 Identities=23% Similarity=0.163 Sum_probs=25.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
|+|+++..+..| +..|..|+++|++|+++=
T Consensus 1 ~dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE 30 (425)
T 3ka7_A 1 MKTVVIGAGLGG-----LLSAARLSKAGHEVEVFE 30 (425)
T ss_dssp CEEEEECCBHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CcEEEECCCHHH-----HHHHHHHHhCCCceEEEe
Confidence 578888877666 888999999999999994
No 258
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=26.14 E-value=35 Score=29.75 Aligned_cols=29 Identities=21% Similarity=0.186 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEE
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLI 44 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~ 44 (472)
|+|.|+..+..|. .+|+.|++.||+|++.
T Consensus 1 M~I~iIG~G~mG~-----~la~~l~~~g~~V~~~ 29 (264)
T 1i36_A 1 LRVGFIGFGEVAQ-----TLASRLRSRGVEVVTS 29 (264)
T ss_dssp CEEEEESCSHHHH-----HHHHHHHHTTCEEEEC
T ss_pred CeEEEEechHHHH-----HHHHHHHHCCCeEEEe
Confidence 6899998877774 5799999999999884
No 259
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=26.14 E-value=34 Score=27.85 Aligned_cols=33 Identities=15% Similarity=0.060 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEEcC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQH-HCRVTLITTY 47 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~r-Gh~Vt~~~~~ 47 (472)
.+||+++..+..| ..+|+.|.++ ||+|+++...
T Consensus 39 ~~~v~IiG~G~~G-----~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIG-----TGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHH-----HHHHHHHHHHHCSCEEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHhccCCeEEEEECC
Confidence 4689999765544 5678999999 9999998643
No 260
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=26.06 E-value=76 Score=27.78 Aligned_cols=33 Identities=21% Similarity=0.139 Sum_probs=24.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
+|+|+++. + |. =-..|++.|.++||+|+.++-.
T Consensus 3 ~~~ilVtG--a-G~--iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIAG--C-GD--LGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEEC--C-SH--HHHHHHHHHHHTTCCEEEEECT
T ss_pred CCcEEEEC--C-CH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 35788774 4 63 3457899999999999998653
No 261
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=26.06 E-value=4.2e+02 Score=24.99 Aligned_cols=136 Identities=13% Similarity=0.158 Sum_probs=74.7
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcc
Q 012061 275 SVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSH 354 (472)
Q Consensus 275 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~ 354 (472)
+.|-|-+||.. +-...+++...|+..|.++=..+-+ .+...+.+.+ +.+.....+
T Consensus 266 ~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~s---aHR~p~~~~~-----~~~~~~~~g--------------- 320 (425)
T 2h31_A 266 CRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTS---AHKGPDETLR-----IKAEYEGDG--------------- 320 (425)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC---TTTCHHHHHH-----HHHHHHTTC---------------
T ss_pred CeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeee---ccCCHHHHHH-----HHHHHHHCC---------------
Confidence 46777777764 5777788888888888887555544 2222211111 111111111
Q ss_pred cCc-CcEEeecCcc----hHHHHHHhCCcEEecCCcccchhhHHH----HHh--hCeeeEEeecCCCCcCCcCHHHHHHH
Q 012061 355 RAV-GGFVSHGGWN----SLVEAARHGVPLLVWPHFGDQKINAEA----VER--AGLGMWVRSWGWGTELRAKGDEIGLK 423 (472)
Q Consensus 355 ~~~-~~~I~HgG~~----s~~eal~~GvP~l~~P~~~DQ~~na~~----v~~--~G~G~~l~~~~~~~~~~~~~~~l~~~ 423 (472)
+ +++|.=+|.- ++..++ .-+|+|.+|.. ...++.- +.+ .|+.+.. =....++.-++..
T Consensus 321 --~~~viIa~AG~~a~Lpgvva~~-t~~PVIgvP~~--~~~~G~daLls~vqmp~g~pvat------v~~~~nAa~~A~~ 389 (425)
T 2h31_A 321 --IPTVFVAVAGRSNGLGPVMSGN-TAYPVISCPPL--TPDWGVQDVWSSLRLPSGLGCST------VLSPEGSAQFAAQ 389 (425)
T ss_dssp --CCEEEEEECCSSCCHHHHHHHH-CSSCEEECCCC--CTTTHHHHGGGTSSCCSSCCCEE------CCCHHHHHHHHHH
T ss_pred --CCeEEEEEcCcccchHhHHhcc-CCCCEEEeeCc--cccccHHHHHHHhcCCCCCceEE------ecCchHHHHHHHH
Confidence 2 1366666642 444444 57899999985 2222211 344 3665443 1122344444444
Q ss_pred HHHHhcCHHHHHHHHHHHHHHHHH
Q 012061 424 IKDLMANDFLREQAKRIEEEARKA 447 (472)
Q Consensus 424 i~~~l~~~~~~~~a~~l~~~~~~~ 447 (472)
|- -++|+..+++.+..+......
T Consensus 390 Il-~~~~~~l~~kl~~~~~~~~~~ 412 (425)
T 2h31_A 390 IF-GLSNHLVWSKLRASILNTWIS 412 (425)
T ss_dssp HH-HTTCHHHHHHHHHHHHHHHHH
T ss_pred HH-ccCCHHHHHHHHHHHHHHHHH
Confidence 43 346898888888887776654
No 262
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=25.98 E-value=74 Score=28.28 Aligned_cols=39 Identities=15% Similarity=0.103 Sum_probs=29.9
Q ss_pred CCCCEEEEEcCCCccChHHH--HHHHHHHHhCC-CeEEEEEcC
Q 012061 8 DSHPHVALIPSAGMGHLTPF--LRLAASLVQHH-CRVTLITTY 47 (472)
Q Consensus 8 ~~~~~il~~~~~~~GHi~P~--l~La~~L~~rG-h~Vt~~~~~ 47 (472)
.++.+||+++... +|-.+. -.|++.|.+.| .+|++...+
T Consensus 2 ~~~~kvLiv~G~~-~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLITGQN-NHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEESCC-SSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEcCCC-CCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 3578999995544 886555 57888888898 999998764
No 263
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=25.83 E-value=49 Score=31.55 Aligned_cols=34 Identities=12% Similarity=0.125 Sum_probs=25.6
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 7 FDSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 7 ~~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
..+.|+|.++..+..| +.+|..|++ ||+|+.+-.
T Consensus 33 ~~~~mkIaVIGlG~mG-----~~lA~~La~-G~~V~~~D~ 66 (432)
T 3pid_A 33 GSEFMKITISGTGYVG-----LSNGVLIAQ-NHEVVALDI 66 (432)
T ss_dssp --CCCEEEEECCSHHH-----HHHHHHHHT-TSEEEEECS
T ss_pred ccCCCEEEEECcCHHH-----HHHHHHHHc-CCeEEEEec
Confidence 3445899999888777 467888888 999998843
No 264
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=25.79 E-value=2.4e+02 Score=22.78 Aligned_cols=83 Identities=17% Similarity=0.096 Sum_probs=46.7
Q ss_pred eEEEeeccc---ccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHh
Q 012061 276 VVYVSFGSR---LALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVL 352 (472)
Q Consensus 276 ~v~vs~GS~---~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll 352 (472)
+-.++.|+. +.....--..+.+.|.+.|..+.+..-- +++.+.+.+.+- ..+
T Consensus 6 v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv----~Dd~~~I~~~l~---------------------~a~ 60 (172)
T 3kbq_A 6 ASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVV----MDDLDEIGWAFR---------------------VAL 60 (172)
T ss_dssp EEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEE----CSCHHHHHHHHH---------------------HHH
T ss_pred EEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEe----CCCHHHHHHHHH---------------------HHH
Confidence 556777764 2222333445677777788876554322 133333332221 112
Q ss_pred cccCcCcEEeecCcc-----hHHHHHH--hCCcEEecCCc
Q 012061 353 SHRAVGGFVSHGGWN-----SLVEAAR--HGVPLLVWPHF 385 (472)
Q Consensus 353 ~~~~~~~~I~HgG~~-----s~~eal~--~GvP~l~~P~~ 385 (472)
. +++++||-||.| -+.|+++ +|+++...|-.
T Consensus 61 ~--~~DlVittGG~g~~~~D~T~ea~a~~~~~~l~~~~e~ 98 (172)
T 3kbq_A 61 E--VSDLVVSSGGLGPTFDDMTVEGFAKCIGQDLRIDEDA 98 (172)
T ss_dssp H--HCSEEEEESCCSSSTTCCHHHHHHHHHTCCCEECHHH
T ss_pred h--cCCEEEEcCCCcCCcccchHHHHHHHcCCCeeeCHHH
Confidence 2 266799999987 3556664 68888777654
No 265
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=25.78 E-value=53 Score=29.00 Aligned_cols=37 Identities=16% Similarity=0.020 Sum_probs=24.0
Q ss_pred hhhhhcCCCCcEEEEcCCC-hhhhHHHHHhcCCCeEEE
Q 012061 102 LLAPLLSPPLSALITDVTL-ISAVLPVTINLHLPNYVL 138 (472)
Q Consensus 102 ~~~~ll~~~~D~vI~D~~~-~~~~~~vA~~lgIP~v~~ 138 (472)
.++.++.++||+||..... ..-...--++.|||++.+
T Consensus 51 n~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~ 88 (283)
T 2r79_A 51 AAEGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETL 88 (283)
T ss_dssp CHHHHHTTCCSEEEECTTCCCHHHHHHHHHTTCCEEEC
T ss_pred CHHHHHhcCCCEEEEeCccCcHHHHHHHHHcCCcEEEe
Confidence 4555555899999987622 122334556689998765
No 266
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=25.78 E-value=2.8e+02 Score=23.41 Aligned_cols=37 Identities=11% Similarity=0.077 Sum_probs=29.6
Q ss_pred EEEEEcCC-CccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 12 HVALIPSA-GMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 12 ~il~~~~~-~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
.|-+++.+ +.|=..-++..+..+..+|.+|.++.+..
T Consensus 29 ~I~vitG~M~sGKTT~Llr~~~r~~~~g~kvli~kp~~ 66 (219)
T 3e2i_A 29 WIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAI 66 (219)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEEC-
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHcCCceEEEEecc
Confidence 45566664 77888889999999999999998887753
No 267
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=25.62 E-value=57 Score=27.59 Aligned_cols=33 Identities=18% Similarity=0.013 Sum_probs=23.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
|++++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 1 Mk~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r 33 (230)
T 3guy_A 1 MSLIVITGASSG---LGAELAKLYDAEGKATYLTGR 33 (230)
T ss_dssp --CEEEESTTSH---HHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEecCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 566777776633 346889999999999988754
No 268
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=25.58 E-value=21 Score=32.03 Aligned_cols=32 Identities=31% Similarity=0.297 Sum_probs=27.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
|+|+++..++.|- .+|..|++.||+|+++...
T Consensus 3 mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 6899999988884 6788999999999999654
No 269
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=25.38 E-value=40 Score=29.66 Aligned_cols=33 Identities=12% Similarity=0.045 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
+|+|+++. + |.+= ..|++.|.++||+|+.++-.
T Consensus 5 ~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CCEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESC
T ss_pred cCcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcC
Confidence 36888875 4 6553 47899999999999988653
No 270
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=25.32 E-value=40 Score=31.97 Aligned_cols=34 Identities=9% Similarity=0.073 Sum_probs=27.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
+.+||+++.++-.| ..+++.|.++||+|+++-..
T Consensus 3 ~~~~viIiG~Gr~G-----~~va~~L~~~g~~vvvId~d 36 (413)
T 3l9w_A 3 HGMRVIIAGFGRFG-----QITGRLLLSSGVKMVVLDHD 36 (413)
T ss_dssp -CCSEEEECCSHHH-----HHHHHHHHHTTCCEEEEECC
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 45789999886655 57899999999999999654
No 271
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=25.27 E-value=1.3e+02 Score=26.79 Aligned_cols=37 Identities=14% Similarity=0.142 Sum_probs=25.2
Q ss_pred CCCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 6 GFDSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 6 ~~~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
...+.++|+++.. .|.+ -..|++.|.++||+|+.+.-
T Consensus 7 ~~~~~~~vlVTGa--tG~i--G~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 7 VLPEGSLVLVTGA--NGFV--ASHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp SSCTTCEEEEETT--TSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCCEEEEECC--ccHH--HHHHHHHHHHCCCEEEEEeC
Confidence 3344567776643 2433 35789999999999998754
No 272
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=25.20 E-value=85 Score=29.80 Aligned_cols=26 Identities=15% Similarity=0.115 Sum_probs=20.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCC
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHC 39 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh 39 (472)
++|+|+++..+++- .+||+.|++.+.
T Consensus 2 ~~mkvlviG~ggre-----~ala~~l~~s~~ 27 (431)
T 3mjf_A 2 NAMNILIIGNGGRE-----HALGWKAAQSPL 27 (431)
T ss_dssp -CEEEEEEECSHHH-----HHHHHHHTTCTT
T ss_pred CCcEEEEECCCHHH-----HHHHHHHHhCCC
Confidence 35899999888654 478999999875
No 273
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=25.17 E-value=91 Score=25.89 Aligned_cols=35 Identities=11% Similarity=0.046 Sum_probs=28.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 12 HVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 12 ~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
.++++-.+..|+-.-+..+++.|+++|+.|..+-.
T Consensus 33 p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 33 PIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 46666666778888899999999999998887743
No 274
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=25.14 E-value=1e+02 Score=25.91 Aligned_cols=34 Identities=12% Similarity=0.073 Sum_probs=23.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
.|+|+++.. .|.+ -..|++.|.++||+|+.++-.
T Consensus 21 ~~~ilVtGa--tG~i--G~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 21 GMRVLVVGA--NGKV--ARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp CCEEEEETT--TSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEECC--CChH--HHHHHHHHHhCCCeEEEEECC
Confidence 356766643 2333 357899999999999988643
No 275
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=25.07 E-value=2.1e+02 Score=21.13 Aligned_cols=47 Identities=9% Similarity=0.123 Sum_probs=29.3
Q ss_pred CCcEEecCCcccchhhHHHHHhhCeeeEEeecCCCCcCCcCHHHHHHHHHHHhc
Q 012061 376 GVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMA 429 (472)
Q Consensus 376 GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~ 429 (472)
.+|+|++--..|...-.....+.|+--.+ .+.++.++|..+|++++.
T Consensus 80 ~~~ii~~s~~~~~~~~~~~~~~~g~~~~l-------~kP~~~~~l~~~i~~~l~ 126 (140)
T 3grc_A 80 DLAIVVVSANAREGELEFNSQPLAVSTWL-------EKPIDENLLILSLHRAID 126 (140)
T ss_dssp TCEEEEECTTHHHHHHHHCCTTTCCCEEE-------CSSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCChHHHHHHhhhcCCCEEE-------eCCCCHHHHHHHHHHHHH
Confidence 67888775443332222133445655556 234789999999999985
No 276
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=25.01 E-value=63 Score=28.53 Aligned_cols=36 Identities=25% Similarity=0.365 Sum_probs=29.6
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 13 VALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 13 il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
|.|..-++-|=..-...||..|+++|++|.++=..+
T Consensus 5 Iavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D~ 40 (289)
T 2afh_E 5 CAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDP 40 (289)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred EEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 445455788999999999999999999999885443
No 277
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=24.97 E-value=72 Score=23.48 Aligned_cols=27 Identities=26% Similarity=0.205 Sum_probs=22.1
Q ss_pred ccChHHHHHHHHHHHhC-CC-eEEEEEcC
Q 012061 21 MGHLTPFLRLAASLVQH-HC-RVTLITTY 47 (472)
Q Consensus 21 ~GHi~P~l~La~~L~~r-Gh-~Vt~~~~~ 47 (472)
.......+.+|..+.+. || +|+++-..
T Consensus 15 ~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 15 SESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp CSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred cHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 34567789999999998 99 99998665
No 278
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=24.90 E-value=2.1e+02 Score=21.14 Aligned_cols=48 Identities=8% Similarity=0.095 Sum_probs=27.8
Q ss_pred hCCcEEecCCcccchhhHHHHHhhCe-eeEEeecCCCCcCCcCHHHHHHHHHHHhcC
Q 012061 375 HGVPLLVWPHFGDQKINAEAVERAGL-GMWVRSWGWGTELRAKGDEIGLKIKDLMAN 430 (472)
Q Consensus 375 ~GvP~l~~P~~~DQ~~na~~v~~~G~-G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~ 430 (472)
..+|.|++--..|.......+...|+ +... + .++.++|..+|+.++..
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~~ga~~~l~------K--P~~~~~L~~~i~~~~~~ 119 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAINDAGIHQFLT------K--PWHPEQLLSSARNAARM 119 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHHTTCCEEEE------S--SCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHhhchhhhcc------C--CCCHHHHHHHHHHHHHH
Confidence 35677766443443333333333355 4444 3 46899999999998753
No 279
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=24.83 E-value=34 Score=30.81 Aligned_cols=32 Identities=22% Similarity=0.197 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
+.+|+++..+..| +..|..|+++|++|+++-.
T Consensus 22 ~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~vie~ 53 (338)
T 3itj_A 22 HNKVTIIGSGPAA-----HTAAIYLARAEIKPILYEG 53 (338)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTTCCCEEECC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEec
Confidence 4579999887655 7889999999999999944
No 280
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=24.78 E-value=64 Score=28.52 Aligned_cols=31 Identities=19% Similarity=0.218 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
.++|.++..+..| ..+|+.|+++||+|+++.
T Consensus 4 ~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d 34 (283)
T 4e12_A 4 ITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYD 34 (283)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEe
Confidence 3589999877766 468999999999999874
No 281
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=24.77 E-value=80 Score=27.49 Aligned_cols=39 Identities=21% Similarity=0.287 Sum_probs=30.7
Q ss_pred CCCCEEEEEcC--CCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 8 DSHPHVALIPS--AGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 8 ~~~~~il~~~~--~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
.++|+.+|++. ..-|=..-.+.|++.|+++|++|.++=+
T Consensus 23 ~~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKP 63 (251)
T 3fgn_A 23 QSHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKP 63 (251)
T ss_dssp CSSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ccCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEee
Confidence 35566555554 4678888999999999999999999853
No 282
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=24.75 E-value=50 Score=31.07 Aligned_cols=30 Identities=13% Similarity=0.160 Sum_probs=25.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
|+|+++..+..| +..|..|+++|++|+++=
T Consensus 1 ~dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE 30 (421)
T 3nrn_A 1 MRAVVVGAGLGG-----LLAGAFLARNGHEIIVLE 30 (421)
T ss_dssp CEEEEESCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CcEEEECCCHHH-----HHHHHHHHHCCCeEEEEe
Confidence 578888887665 788999999999999993
No 283
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=24.74 E-value=86 Score=27.62 Aligned_cols=41 Identities=20% Similarity=0.154 Sum_probs=33.1
Q ss_pred CCCEEEEEcCC---CccChHHHHHHHHHHHhCCCeEEEEEcCCC
Q 012061 9 SHPHVALIPSA---GMGHLTPFLRLAASLVQHHCRVTLITTYPT 49 (472)
Q Consensus 9 ~~~~il~~~~~---~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~ 49 (472)
..|+.+|++.+ +.|-=.-.-.|+..|..||++||+.--.++
T Consensus 21 ~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPY 64 (295)
T 2vo1_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (295)
T ss_dssp CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred ccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccc
Confidence 56789999886 556667788999999999999999865544
No 284
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=24.66 E-value=63 Score=28.77 Aligned_cols=37 Identities=0% Similarity=-0.067 Sum_probs=27.7
Q ss_pred CEEEEEcCCCccC---hHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 11 PHVALIPSAGMGH---LTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 11 ~~il~~~~~~~GH---i~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
|+|+++..+.... ......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 5899998874321 234467999999999999988653
No 285
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=24.62 E-value=71 Score=30.77 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=27.7
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 7 FDSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 7 ~~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
.++.++|+++..+..| +..|..|+++|++|+++-
T Consensus 8 ~~~~~~v~IIGaG~aG-----l~aA~~L~~~g~~v~v~E 41 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAG-----LCSAFELQKAGYKVTVLE 41 (489)
T ss_dssp CCSCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred ccCCCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEe
Confidence 3456789999888655 778999999999999984
No 286
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=24.58 E-value=72 Score=28.90 Aligned_cols=37 Identities=22% Similarity=0.247 Sum_probs=32.3
Q ss_pred EEEEEcC-CCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 12 HVALIPS-AGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 12 ~il~~~~-~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
+|++++. ++-|-..-..+||..|+++|++|.++....
T Consensus 15 ~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 15 TFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 5555555 899999999999999999999999998876
No 287
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=24.57 E-value=3.8e+02 Score=23.91 Aligned_cols=53 Identities=17% Similarity=0.230 Sum_probs=30.2
Q ss_pred hCCcEEecCCcc------------cc----hhhHHHHHhhCe-eeEEeec-----CC-CCcCCcCHHHHHHHHHHH
Q 012061 375 HGVPLLVWPHFG------------DQ----KINAEAVERAGL-GMWVRSW-----GW-GTELRAKGDEIGLKIKDL 427 (472)
Q Consensus 375 ~GvP~l~~P~~~------------DQ----~~na~~v~~~G~-G~~l~~~-----~~-~~~~~~~~~~l~~~i~~~ 427 (472)
+|+|+++-|-+. .+ +.-|+....+|+ |+.+..= .+ |....++++++.+-++++
T Consensus 213 ~~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H~tpd~al~D~~~sl~p~el~~lv~~i 288 (298)
T 3fs2_A 213 LGAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIETHEDPDNAPSDGPNMVPIDKMPALLEKL 288 (298)
T ss_dssp TTSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEEEESSGGGCSSSGGGCEEGGGHHHHHHHH
T ss_pred cCCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEEecCChhccCCchhhcCCHHHHHHHHHHH
Confidence 588887755432 11 344666677787 5666320 11 123456778887777666
No 288
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=24.52 E-value=83 Score=27.66 Aligned_cols=40 Identities=23% Similarity=0.200 Sum_probs=31.6
Q ss_pred CCCEEEEEcC--CCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 9 SHPHVALIPS--AGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 9 ~~~~il~~~~--~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
++++++++.. |+-|=..-...||..|+++|.+|.++-...
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~ 121 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDM 121 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 3455555543 788999999999999999999999986543
No 289
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=24.50 E-value=73 Score=28.31 Aligned_cols=34 Identities=12% Similarity=0.152 Sum_probs=23.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
+|+|+++. +.|.+ -..|++.|.++||+|+.++-.
T Consensus 4 ~~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIVG--GTGYI--GKRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEES--TTSTT--HHHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEEc--CCcHH--HHHHHHHHHhCCCcEEEEECC
Confidence 35677664 33444 356889999999999987644
No 290
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=24.45 E-value=1.1e+02 Score=25.34 Aligned_cols=34 Identities=12% Similarity=-0.069 Sum_probs=24.3
Q ss_pred CCEEEEEcCCCccCh----HHHHHHHHHHHhCCCeEEEE
Q 012061 10 HPHVALIPSAGMGHL----TPFLRLAASLVQHHCRVTLI 44 (472)
Q Consensus 10 ~~~il~~~~~~~GHi----~P~l~La~~L~~rGh~Vt~~ 44 (472)
.|+|.++.... +.- .-...|++.|+++|+.|..=
T Consensus 13 ~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~G 50 (189)
T 3sbx_A 13 RWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWG 50 (189)
T ss_dssp CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEEC
Confidence 47899988766 543 44567778888999976544
No 291
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=24.44 E-value=1.2e+02 Score=26.04 Aligned_cols=32 Identities=28% Similarity=0.245 Sum_probs=24.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 12 HVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 12 ~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
++++++.++.| =-.++|+.|+++|++|.++..
T Consensus 10 k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 41 (248)
T 3op4_A 10 KVALVTGASRG---IGKAIAELLAERGAKVIGTAT 41 (248)
T ss_dssp CEEEESSCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 57788877643 246889999999999988753
No 292
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=24.19 E-value=73 Score=26.14 Aligned_cols=37 Identities=8% Similarity=0.229 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCccChHHHHH-HHHHHHhCCCeEEEEEcC
Q 012061 10 HPHVALIPSAGMGHLTPFLR-LAASLVQHHCRVTLITTY 47 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~-La~~L~~rGh~Vt~~~~~ 47 (472)
+|+|+++-+. .|+..-+.. +++.|.+.|++|.++.-.
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 4788888777 887665543 455566689999988543
No 293
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=24.14 E-value=41 Score=28.75 Aligned_cols=27 Identities=30% Similarity=0.370 Sum_probs=22.1
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCeEEEE
Q 012061 13 VALIPSAGMGHLTPFLRLAASLVQHHCRVTLI 44 (472)
Q Consensus 13 il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~ 44 (472)
|+|+..+--| +.+|..|+++|++|+++
T Consensus 5 V~IIGaGpaG-----L~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 5 IAIIGTGIAG-----LSAAQALTAAGHQVHLF 31 (336)
T ss_dssp EEEECCSHHH-----HHHHHHHHHTTCCEEEE
T ss_pred EEEECcCHHH-----HHHHHHHHHCCCCEEEE
Confidence 6666665434 88999999999999999
No 294
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=23.98 E-value=77 Score=28.32 Aligned_cols=34 Identities=6% Similarity=0.025 Sum_probs=24.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
+|+|+++. +.|.+ -..|++.|.++||+|+.++-.
T Consensus 4 ~~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 37 (321)
T 3c1o_A 4 MEKIIIYG--GTGYI--GKFMVRASLSFSHPTFIYARP 37 (321)
T ss_dssp CCCEEEET--TTSTT--HHHHHHHHHHTTCCEEEEECC
T ss_pred ccEEEEEc--CCchh--HHHHHHHHHhCCCcEEEEECC
Confidence 35666654 33544 347889999999999988754
No 295
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=23.96 E-value=72 Score=20.24 Aligned_cols=44 Identities=9% Similarity=0.108 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHH
Q 012061 417 GDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELID 463 (472)
Q Consensus 417 ~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 463 (472)
.+++.+.-...|.||+++..-..-+..|-+. +|-....|++.++
T Consensus 9 Re~li~~Av~FL~dp~V~~sp~~~K~~FL~s---KGLt~~EI~~Al~ 52 (54)
T 3ff5_A 9 REPLIATAVKFLQNSRVRQSPLATRRAFLKK---KGLTDEEIDLAFQ 52 (54)
T ss_dssp HHHHHHHHHHHHHCTTGGGSCHHHHHHHHHH---TTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCChhhhcCCHHHHHHHHHH---cCCCHHHHHHHHH
Confidence 4555555557888998887666666666554 7888888887765
No 296
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=23.74 E-value=1.2e+02 Score=25.65 Aligned_cols=34 Identities=12% Similarity=0.175 Sum_probs=23.7
Q ss_pred CEEEEEcCCCcc----ChHHHHHHHHHHHhCCCeEEEE
Q 012061 11 PHVALIPSAGMG----HLTPFLRLAASLVQHHCRVTLI 44 (472)
Q Consensus 11 ~~il~~~~~~~G----Hi~P~l~La~~L~~rGh~Vt~~ 44 (472)
..|.++.....+ +..-...|++.|+++|+.|+.=
T Consensus 10 ~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~G 47 (216)
T 1ydh_A 10 RKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYG 47 (216)
T ss_dssp SEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEEC
Confidence 368888665544 3446678888889999976443
No 297
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=23.69 E-value=46 Score=32.34 Aligned_cols=33 Identities=27% Similarity=0.312 Sum_probs=27.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
.+|+|.|+..+..| ..||+.|+++||+|+++..
T Consensus 3 ~~~kIgiIGlG~MG-----~~lA~~L~~~G~~V~v~dr 35 (484)
T 4gwg_A 3 AQADIALIGLAVMG-----QNLILNMNDHGFVVCAFNR 35 (484)
T ss_dssp CCBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCEEEEEChhHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 45789999988877 5689999999999998843
No 298
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=23.61 E-value=1.1e+02 Score=28.17 Aligned_cols=60 Identities=18% Similarity=0.145 Sum_probs=36.9
Q ss_pred CCChHHHhcccCcCcEEeecCcch----HHHHHHhCCcEEec-CCccc--c-hhhHHHHHhhCeeeEE
Q 012061 345 WVDQDKVLSHRAVGGFVSHGGWNS----LVEAARHGVPLLVW-PHFGD--Q-KINAEAVERAGLGMWV 404 (472)
Q Consensus 345 ~~pq~~ll~~~~~~~~I~HgG~~s----~~eal~~GvP~l~~-P~~~D--Q-~~na~~v~~~G~G~~l 404 (472)
+-+..++|..+++++++-..-..+ +.+++.+|++++|= |+..+ + ..-.+.+++.|+=+.+
T Consensus 57 ~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v 124 (359)
T 3m2t_A 57 LDNVPAMLNQVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGV 124 (359)
T ss_dssp ESSHHHHHHHSCCSEEEECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred cCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 457788898888888886655443 56778888887773 65432 2 2222333444654444
No 299
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=23.48 E-value=1e+02 Score=28.33 Aligned_cols=28 Identities=7% Similarity=0.022 Sum_probs=20.3
Q ss_pred cCcEEee-cCcchHHHHHHhCCcEEecCC
Q 012061 357 VGGFVSH-GGWNSLVEAARHGVPLLVWPH 384 (472)
Q Consensus 357 ~~~~I~H-gG~~s~~eal~~GvP~l~~P~ 384 (472)
-+++|++ .+......+-..|+|.+.+-.
T Consensus 115 PD~Vv~~~~~~~~~~aa~~~giP~v~~~~ 143 (391)
T 3tsa_A 115 PSVLLVDVCALIGRVLGGLLDLPVVLHRW 143 (391)
T ss_dssp CSEEEEETTCHHHHHHHHHTTCCEEEECC
T ss_pred CCEEEeCcchhHHHHHHHHhCCCEEEEec
Confidence 3447777 566667777889999988743
No 300
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=23.46 E-value=33 Score=29.07 Aligned_cols=31 Identities=16% Similarity=0.237 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
.|+|.|+..+..| ..+|+.|++.||+|+++.
T Consensus 23 mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~ 53 (220)
T 4huj_A 23 MTTYAIIGAGAIG-----SALAERFTAAQIPAIIAN 53 (220)
T ss_dssp SCCEEEEECHHHH-----HHHHHHHHHTTCCEEEEC
T ss_pred CCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEE
Confidence 4789999877766 468999999999999854
No 301
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=23.37 E-value=1e+02 Score=24.58 Aligned_cols=28 Identities=32% Similarity=0.386 Sum_probs=22.5
Q ss_pred eEEEeecccccCCHHHHHHHHHHHHhCC
Q 012061 276 VVYVSFGSRLALSMEQTKELGDGLLSSG 303 (472)
Q Consensus 276 ~v~vs~GS~~~~~~~~~~~~~~al~~~~ 303 (472)
.+|+++||......+.+...+.+|.+.+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 5899999986556777888888888753
No 302
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=23.35 E-value=3.5e+02 Score=24.56 Aligned_cols=106 Identities=16% Similarity=0.094 Sum_probs=59.5
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHHhC-CCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhc
Q 012061 275 SVVYVSFGSRLALSMEQTKELGDGLLSS-GCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLS 353 (472)
Q Consensus 275 ~~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~ 353 (472)
.+..|++|.++ ...+.++.+. +..++-+... +.+... ..+..++ ..+-+..++|.
T Consensus 7 ~vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~------~~~~~~---------~a~~~g~--~~~~~~~~ll~ 62 (359)
T 3e18_A 7 QLVIVGYGGMG-------SYHVTLASAADNLEVHGVFDI------LAEKRE---------AAAQKGL--KIYESYEAVLA 62 (359)
T ss_dssp EEEEECCSHHH-------HHHHHHHHTSTTEEEEEEECS------SHHHHH---------HHHTTTC--CBCSCHHHHHH
T ss_pred cEEEECcCHHH-------HHHHHHHHhCCCcEEEEEEcC------CHHHHH---------HHHhcCC--ceeCCHHHHhc
Confidence 37788888764 2344556555 4455445543 111110 1112344 24667888998
Q ss_pred ccCcCcEEeecCcch----HHHHHHhCCcEEe-cCCccc--ch-hhHHHHHhhCeeeEE
Q 012061 354 HRAVGGFVSHGGWNS----LVEAARHGVPLLV-WPHFGD--QK-INAEAVERAGLGMWV 404 (472)
Q Consensus 354 ~~~~~~~I~HgG~~s----~~eal~~GvP~l~-~P~~~D--Q~-~na~~v~~~G~G~~l 404 (472)
.+++++++--.-..+ +.+++.+|++++| =|+..+ +- .-...+++.|+-+.+
T Consensus 63 ~~~~D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v 121 (359)
T 3e18_A 63 DEKVDAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMV 121 (359)
T ss_dssp CTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCCEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEE
Confidence 788888886655443 6778889999888 365533 22 222333445665554
No 303
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=23.32 E-value=1.3e+02 Score=23.95 Aligned_cols=28 Identities=29% Similarity=0.493 Sum_probs=23.5
Q ss_pred eEEEeecccccCCHHHHHHHHHHHHhCC
Q 012061 276 VVYVSFGSRLALSMEQTKELGDGLLSSG 303 (472)
Q Consensus 276 ~v~vs~GS~~~~~~~~~~~~~~al~~~~ 303 (472)
.+|+++||......+.+...+.+|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 5899999987667888899999998753
No 304
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=23.28 E-value=82 Score=27.90 Aligned_cols=30 Identities=17% Similarity=0.242 Sum_probs=24.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
|+|.|+..+..|. .+++.|.+.||+|+++.
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 35 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSD 35 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEEC
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEe
Confidence 6999999887774 46888999999998774
No 305
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=23.25 E-value=1.8e+02 Score=22.92 Aligned_cols=37 Identities=8% Similarity=0.079 Sum_probs=29.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
.|||+++-+++. ...-+....+.|.+.|++|+++++.
T Consensus 2 ~~ki~il~~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~ 38 (168)
T 3l18_A 2 SMKVLFLSADGF-EDLELIYPLHRIKEEGHEVYVASFQ 38 (168)
T ss_dssp CCEEEEECCTTB-CHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEeCCCc-cHHHHHHHHHHHHHCCCEEEEEECC
Confidence 578999988864 4555667778889999999999875
No 306
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=23.23 E-value=69 Score=27.70 Aligned_cols=39 Identities=28% Similarity=0.347 Sum_probs=30.9
Q ss_pred CCEEEEEc--CCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 10 HPHVALIP--SAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 10 ~~~il~~~--~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
+|+++.+. -++-|-..-...||..|+++|++|.++=...
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 45555443 3788899999999999999999999986543
No 307
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=23.21 E-value=65 Score=27.40 Aligned_cols=39 Identities=18% Similarity=0.060 Sum_probs=30.7
Q ss_pred CCEEEEE-c-CCCccChHHHHHHHHHHHhC-CCeEEEEEcCC
Q 012061 10 HPHVALI-P-SAGMGHLTPFLRLAASLVQH-HCRVTLITTYP 48 (472)
Q Consensus 10 ~~~il~~-~-~~~~GHi~P~l~La~~L~~r-Gh~Vt~~~~~~ 48 (472)
+++++.+ + -++-|=..-...||..|+++ |++|.++-...
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~ 44 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISL 44 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 4454444 3 37889999999999999998 99999996543
No 308
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=23.20 E-value=52 Score=29.98 Aligned_cols=32 Identities=19% Similarity=0.221 Sum_probs=26.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
...|+++..+..| +..|..|+++|++|+++--
T Consensus 4 ~~dvvIIG~G~~G-----l~~A~~La~~G~~V~vlE~ 35 (369)
T 3dme_A 4 DIDCIVIGAGVVG-----LAIARALAAGGHEVLVAEA 35 (369)
T ss_dssp CEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred cCCEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 3578998888765 7889999999999999943
No 309
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=23.14 E-value=52 Score=30.39 Aligned_cols=32 Identities=22% Similarity=0.350 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
..+|+++..+..| +.+|..|+++|++|+++-.
T Consensus 5 ~~dVvIIGgGi~G-----l~~A~~La~~G~~V~lle~ 36 (382)
T 1y56_B 5 KSEIVVIGGGIVG-----VTIAHELAKRGEEVTVIEK 36 (382)
T ss_dssp BCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred cCCEEEECCCHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 4579999888766 8899999999999999943
No 310
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=23.10 E-value=1.7e+02 Score=24.79 Aligned_cols=32 Identities=22% Similarity=0.229 Sum_probs=24.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 12 HVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 12 ~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
++++++.++. -+ -..+|+.|+++|++|.++.-
T Consensus 15 k~vlITGas~-gI--G~~ia~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 15 RVILVTGAAR-GI--GAAAARAYAAHGASVVLLGR 46 (247)
T ss_dssp CEEEESSTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCC-hH--HHHHHHHHHHCCCEEEEEec
Confidence 6777777663 23 45789999999999988753
No 311
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=23.10 E-value=85 Score=26.92 Aligned_cols=33 Identities=12% Similarity=0.027 Sum_probs=23.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
|+.++++.++.| =-..+++.|+++|++|+++.-
T Consensus 1 mk~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 1 MSIIVISGCATG---IGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 456666665532 246789999999999988753
No 312
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=23.07 E-value=1.2e+02 Score=27.33 Aligned_cols=35 Identities=20% Similarity=0.170 Sum_probs=25.0
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
+.|+|+++.. .|.+ -..|++.|.++||+|+.++-.
T Consensus 12 ~~M~ilVtGa--tG~i--G~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 12 AHVKYAVLGA--TGLL--GHHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCCEEEEEST--TSHH--HHHHHHHHHHTTCEEEEEECT
T ss_pred cCCEEEEECC--CcHH--HHHHHHHHHHCCCEEEEEecC
Confidence 3477777643 3433 367889999999999988653
No 313
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=23.02 E-value=1e+02 Score=25.57 Aligned_cols=34 Identities=24% Similarity=0.227 Sum_probs=22.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHH-hCCCeEEEEEc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLV-QHHCRVTLITT 46 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~-~rGh~Vt~~~~ 46 (472)
+|+.+++..++ |-+ -..+++.|+ ++||+|+.+.-
T Consensus 4 mmk~vlVtGas-g~i--G~~~~~~l~~~~g~~V~~~~r 38 (221)
T 3r6d_A 4 MYXYITILGAA-GQI--AQXLTATLLTYTDMHITLYGR 38 (221)
T ss_dssp SCSEEEEESTT-SHH--HHHHHHHHHHHCCCEEEEEES
T ss_pred eEEEEEEEeCC-cHH--HHHHHHHHHhcCCceEEEEec
Confidence 35644444433 333 368899999 89999998864
No 314
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=22.97 E-value=1.2e+02 Score=29.09 Aligned_cols=42 Identities=14% Similarity=0.182 Sum_probs=36.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVS 51 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~ 51 (472)
+..|+++..++-|=..-...||..|+++|++|.++....++.
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 446777777899999999999999999999999998876654
No 315
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=22.86 E-value=1.3e+02 Score=26.11 Aligned_cols=41 Identities=17% Similarity=0.112 Sum_probs=28.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccc
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLA 53 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~ 53 (472)
|||++.-=-+. |--=+..|+++|.+.| +|+++.|...++..
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~ 41 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAA 41 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCC
Confidence 56666654333 2233788999999988 89999988665443
No 316
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=22.75 E-value=87 Score=26.87 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=29.7
Q ss_pred EEEEE-cC-CCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 12 HVALI-PS-AGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 12 ~il~~-~~-~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
+++.+ +. ++-|=..-...||..|+++|++|.++=...
T Consensus 3 ~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 44444 33 788999999999999999999999986554
No 317
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=22.61 E-value=76 Score=29.00 Aligned_cols=33 Identities=24% Similarity=0.332 Sum_probs=27.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
+...|+++..+..| +.+|..|+++|++|+++-.
T Consensus 5 ~~~dVvVIG~Gi~G-----ls~A~~La~~G~~V~vle~ 37 (363)
T 1c0p_A 5 SQKRVVVLGSGVIG-----LSSALILARKGYSVHILAR 37 (363)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEECCCHHH-----HHHHHHHHhCCCEEEEEec
Confidence 34689999888655 7889999999999999953
No 318
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=22.42 E-value=35 Score=31.63 Aligned_cols=30 Identities=20% Similarity=0.226 Sum_probs=25.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 12 HVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 12 ~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
+|.|+..+..| ..+|..|+++||+|+++..
T Consensus 17 kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r 46 (366)
T 1evy_A 17 KAVVFGSGAFG-----TALAMVLSKKCREVCVWHM 46 (366)
T ss_dssp EEEEECCSHHH-----HHHHHHHTTTEEEEEEECS
T ss_pred eEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 89999998877 4689999999999998853
No 319
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=22.06 E-value=64 Score=29.79 Aligned_cols=32 Identities=22% Similarity=0.151 Sum_probs=26.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
+.++|+|+..+--| +.+|..|+++|++|+++-
T Consensus 10 ~~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~viE 41 (379)
T 3alj_A 10 KTRRAEVAGGGFAG-----LTAAIALKQNGWDVRLHE 41 (379)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEe
Confidence 34689999887655 788999999999999984
No 320
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=21.90 E-value=79 Score=27.24 Aligned_cols=35 Identities=20% Similarity=0.197 Sum_probs=23.0
Q ss_pred EEEEEcCCCccCh--HHHHHHHHHHHhCCCeEEEEEc
Q 012061 12 HVALIPSAGMGHL--TPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 12 ~il~~~~~~~GHi--~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
-++++..++.+|- .-+..+|+.|+++|+.|..+-.
T Consensus 57 p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~ 93 (259)
T 4ao6_A 57 RLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDG 93 (259)
T ss_dssp EEEEEEC--------CHHHHHHHHHHHTTEEEEEECC
T ss_pred CEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeecc
Confidence 4777777776773 3578899999999998887743
No 321
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=21.76 E-value=83 Score=30.84 Aligned_cols=33 Identities=18% Similarity=0.004 Sum_probs=28.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
.+||.|+..++.| |-.+|+.|.++|++|+..=.
T Consensus 19 ~~~i~~iGiGg~G----ms~lA~~l~~~G~~V~~sD~ 51 (524)
T 3hn7_A 19 GMHIHILGICGTF----MGSLALLARALGHTVTGSDA 51 (524)
T ss_dssp CCEEEEETTTSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEEecHhh----HHHHHHHHHhCCCEEEEECC
Confidence 4689999999876 77899999999999997643
No 322
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=21.74 E-value=89 Score=31.03 Aligned_cols=39 Identities=8% Similarity=0.002 Sum_probs=35.9
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
++.+|++.+.++-.|-....-++..|..+|++|..++..
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~ 135 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVM 135 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSS
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCC
Confidence 466899999999999999999999999999999998765
No 323
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=21.60 E-value=91 Score=30.18 Aligned_cols=32 Identities=19% Similarity=0.247 Sum_probs=26.1
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEE
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQH--HCRVTLIT 45 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~r--Gh~Vt~~~ 45 (472)
+.|+|.++..+..| ..+|..|+++ ||+|+++.
T Consensus 8 ~~mkI~VIG~G~vG-----~~~A~~La~~g~g~~V~~~D 41 (481)
T 2o3j_A 8 KVSKVVCVGAGYVG-----GPTCAMIAHKCPHITVTVVD 41 (481)
T ss_dssp CCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEEC
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEE
Confidence 45799999888777 4678889888 79999884
No 324
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=21.53 E-value=93 Score=27.71 Aligned_cols=37 Identities=27% Similarity=0.243 Sum_probs=30.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 12 HVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 12 ~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
.|++..-++-|=..-...||..|+++|++|.++=...
T Consensus 43 vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 43 VFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4555555788999999999999999999999996543
No 325
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=21.38 E-value=1.1e+02 Score=27.88 Aligned_cols=38 Identities=26% Similarity=0.360 Sum_probs=32.0
Q ss_pred EEEEEcC-CCccChHHHHHHHHHHHhCCCeEEEEEcCCC
Q 012061 12 HVALIPS-AGMGHLTPFLRLAASLVQHHCRVTLITTYPT 49 (472)
Q Consensus 12 ~il~~~~-~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~ 49 (472)
+|++++. ++-|-..-...||..|+++|++|.++.....
T Consensus 20 ~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~ 58 (329)
T 2woo_A 20 KWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA 58 (329)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 4555544 8999999999999999999999999987654
No 326
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=21.34 E-value=88 Score=23.11 Aligned_cols=39 Identities=8% Similarity=-0.070 Sum_probs=26.7
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 7 FDSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 7 ~~~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
..++|+|++++..+.|--.=.-.+-+...++|.+|.+..
T Consensus 3 ~~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 3 ASKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp --CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred cccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 356789999999886555544555555566899888864
No 327
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=21.33 E-value=1e+02 Score=25.94 Aligned_cols=35 Identities=17% Similarity=0.274 Sum_probs=28.9
Q ss_pred EEEEcC-CCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 13 VALIPS-AGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 13 il~~~~-~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
|.+++. ++-|-..-...||..|+++|++|.++-..
T Consensus 5 i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (237)
T 1g3q_A 5 ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 444443 78899999999999999999999999654
No 328
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=21.27 E-value=5e+02 Score=27.07 Aligned_cols=18 Identities=6% Similarity=-0.093 Sum_probs=13.9
Q ss_pred cCCcCHHHHHHHHHHHhc
Q 012061 412 ELRAKGDEIGLKIKDLMA 429 (472)
Q Consensus 412 ~~~~~~~~l~~~i~~~l~ 429 (472)
...++++.|.+++.+++.
T Consensus 769 ~~gld~~~Iv~~a~~~l~ 786 (845)
T 3ahc_A 769 VNDMDRYALQAAALKLID 786 (845)
T ss_dssp TTTCSHHHHHHHHHHHHH
T ss_pred HhCcCHHHHHHHHHHHcc
Confidence 345688999988888885
No 329
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=21.26 E-value=1.4e+02 Score=25.93 Aligned_cols=41 Identities=17% Similarity=0.228 Sum_probs=28.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCCCCccc
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLA 53 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~~~~~~ 53 (472)
|||++.-=-+. |--=+..|+++|.+.| +|+++.|...++..
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~ 41 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSAT 41 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCC
Confidence 56666554333 2233788999999988 89999988665443
No 330
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=21.16 E-value=31 Score=31.14 Aligned_cols=32 Identities=9% Similarity=0.082 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
.++|+++..+..| +.+|..|+++|++|+++-.
T Consensus 8 ~~~vvIIG~G~aG-----l~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 8 NTRLCIVGSGPAA-----HTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTTCCCEEECC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCeEEEEec
Confidence 3578888887655 7789999999999999943
No 331
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=21.10 E-value=1.2e+02 Score=20.45 Aligned_cols=48 Identities=8% Similarity=0.080 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHH
Q 012061 416 KGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELIDKWK 466 (472)
Q Consensus 416 ~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (472)
..+++.+.-.+.|.|++++.....-+..|-+. +|-....|++.++...
T Consensus 13 ~Re~li~~Av~FLqdp~V~~sp~~~K~~FL~s---KGLt~eEI~~Al~ra~ 60 (70)
T 2w84_A 13 PREPLIATAVKFLQNSRVRQSPLATRRAFLKK---KGLTDEEIDMAFQQSG 60 (70)
T ss_dssp CCHHHHHHHHHHHCSTTGGGSCHHHHHHHHHH---TTCCHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHhCChhhhhCCHHHHHHHHHH---cCCCHHHHHHHHHHcc
Confidence 34555555557999999888766666666554 7888899998887653
No 332
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=21.07 E-value=85 Score=30.24 Aligned_cols=33 Identities=15% Similarity=0.203 Sum_probs=26.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEEc
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQH--HCRVTLITT 46 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~r--Gh~Vt~~~~ 46 (472)
+.|+|.++..+..| ..+|..|+++ ||+|+++..
T Consensus 4 ~~mkI~VIG~G~mG-----~~lA~~La~~g~G~~V~~~d~ 38 (467)
T 2q3e_A 4 EIKKICCIGAGYVG-----GPTCSVIAHMCPEIRVTVVDV 38 (467)
T ss_dssp CCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECS
T ss_pred CccEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEEC
Confidence 35799999887777 5688889988 899998843
No 333
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=21.06 E-value=3e+02 Score=24.74 Aligned_cols=106 Identities=16% Similarity=0.161 Sum_probs=57.3
Q ss_pred eEEEeecccccCCHHHHHHHHHHHH-h-CCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhc
Q 012061 276 VVYVSFGSRLALSMEQTKELGDGLL-S-SGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLS 353 (472)
Q Consensus 276 ~v~vs~GS~~~~~~~~~~~~~~al~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~ 353 (472)
+.+|+.|.++ ...+.++. . .+..++.+... +.+.. +.+.+. -++....+-+..+++.
T Consensus 5 igiIG~G~~g-------~~~~~~l~~~~~~~~l~av~d~------~~~~~-----~~~~~~---~g~~~~~~~~~~~ll~ 63 (344)
T 3mz0_A 5 IGVIGTGAIG-------KEHINRITNKLSGAEIVAVTDV------NQEAA-----QKVVEQ---YQLNATVYPNDDSLLA 63 (344)
T ss_dssp EEEECCSHHH-------HHHHHHHHHTCSSEEEEEEECS------SHHHH-----HHHHHH---TTCCCEEESSHHHHHH
T ss_pred EEEECccHHH-------HHHHHHHHhhCCCcEEEEEEcC------CHHHH-----HHHHHH---hCCCCeeeCCHHHHhc
Confidence 6778888764 24556666 4 35555555544 11111 111111 2221224567788888
Q ss_pred ccCcCcEEeecCcc----hHHHHHHhCCcEEe-cCCccc--c-hhhHHHHHhhCeee
Q 012061 354 HRAVGGFVSHGGWN----SLVEAARHGVPLLV-WPHFGD--Q-KINAEAVERAGLGM 402 (472)
Q Consensus 354 ~~~~~~~I~HgG~~----s~~eal~~GvP~l~-~P~~~D--Q-~~na~~v~~~G~G~ 402 (472)
.+++++++--.-.. -+.+++.+|++++| =|+..+ + ..-...+++.|+-+
T Consensus 64 ~~~~D~V~i~tp~~~h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 120 (344)
T 3mz0_A 64 DENVDAVLVTSWGPAHESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRL 120 (344)
T ss_dssp CTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCC
T ss_pred CCCCCEEEECCCchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEE
Confidence 87788888655443 45677888998887 365533 2 22223334456655
No 334
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=21.05 E-value=4.5e+02 Score=23.46 Aligned_cols=108 Identities=7% Similarity=0.106 Sum_probs=61.4
Q ss_pred eEEEeecccccCCHHHHHHHHHHHHhCCCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhccc
Q 012061 276 VVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSHR 355 (472)
Q Consensus 276 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~~ 355 (472)
+.+|+.|.+.. ..++.++...+.+++-+...+. ... +.+.+.. +++ .-+-+..++|..+
T Consensus 7 vgiiG~G~~~~------~~~~~~l~~~~~~lvav~d~~~---~~~--------~~~a~~~--~~~--~~~~~~~~ll~~~ 65 (336)
T 2p2s_A 7 FAAIGLAHNHI------YDMCQQLIDAGAELAGVFESDS---DNR--------AKFTSLF--PSV--PFAASAEQLITDA 65 (336)
T ss_dssp EEEECCSSTHH------HHHHHHHHHTTCEEEEEECSCT---TSC--------HHHHHHS--TTC--CBCSCHHHHHTCT
T ss_pred EEEECCChHHH------HHhhhhhcCCCcEEEEEeCCCH---HHH--------HHHHHhc--CCC--cccCCHHHHhhCC
Confidence 67777776531 2344555556777666665421 111 1222221 122 2456788999888
Q ss_pred CcCcEEeecCcc----hHHHHHHhCCcEEec-CCcccch---hhHHHHHhhCeeeEE
Q 012061 356 AVGGFVSHGGWN----SLVEAARHGVPLLVW-PHFGDQK---INAEAVERAGLGMWV 404 (472)
Q Consensus 356 ~~~~~I~HgG~~----s~~eal~~GvP~l~~-P~~~DQ~---~na~~v~~~G~G~~l 404 (472)
++++++--.-.. -+.+++.+|++++|= |+..+-. .-.+.+++.|+-+.+
T Consensus 66 ~~D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v 122 (336)
T 2p2s_A 66 SIDLIACAVIPCDRAELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGRKFAV 122 (336)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCCCEEE
T ss_pred CCCEEEEeCChhhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 888888655543 466789999998885 7664322 222333455766655
No 335
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=21.04 E-value=82 Score=27.13 Aligned_cols=32 Identities=13% Similarity=-0.085 Sum_probs=23.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
|++++++.++.| + -..+|+.|+++|++|+++.
T Consensus 1 Mk~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~ 32 (254)
T 1zmt_A 1 MSTAIVTNVKHF-G--GMGSALRLSEAGHTVACHD 32 (254)
T ss_dssp -CEEEESSTTST-T--HHHHHHHHHHTTCEEEECC
T ss_pred CeEEEEeCCCch-H--HHHHHHHHHHCCCEEEEEe
Confidence 466777776643 3 3678999999999988764
No 336
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=20.97 E-value=2.4e+02 Score=25.46 Aligned_cols=107 Identities=15% Similarity=0.208 Sum_probs=60.2
Q ss_pred eEEEeecccccCCHHHHHHHHHHHHhC-CCceEEEEeCCCCCcchhHHHHhhhhHHHHHHhhcCCceeccCCChHHHhcc
Q 012061 276 VVYVSFGSRLALSMEQTKELGDGLLSS-GCRFLWVVKGKNVDKEDEESLKNVLGHELMEKIKDQGLVVKNWVDQDKVLSH 354 (472)
Q Consensus 276 ~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~pq~~ll~~ 354 (472)
+.+|+.|.++ ...+.+|.+. +..++.+... +.+.. ..+.+.. ++ ...+-+..+++..
T Consensus 5 vgiIG~G~~g-------~~~~~~l~~~~~~~l~av~d~------~~~~~-----~~~~~~~---~~-~~~~~~~~~ll~~ 62 (344)
T 3ezy_A 5 IGVIGLGRIG-------TIHAENLKMIDDAILYAISDV------REDRL-----REMKEKL---GV-EKAYKDPHELIED 62 (344)
T ss_dssp EEEECCSHHH-------HHHHHHGGGSTTEEEEEEECS------CHHHH-----HHHHHHH---TC-SEEESSHHHHHHC
T ss_pred EEEEcCCHHH-------HHHHHHHHhCCCcEEEEEECC------CHHHH-----HHHHHHh---CC-CceeCCHHHHhcC
Confidence 6778888764 2356666654 4555555544 11111 1111111 22 1135677888887
Q ss_pred cCcCcEEeecCcch----HHHHHHhCCcEEec-CCccc--c-hhhHHHHHhhCeeeEE
Q 012061 355 RAVGGFVSHGGWNS----LVEAARHGVPLLVW-PHFGD--Q-KINAEAVERAGLGMWV 404 (472)
Q Consensus 355 ~~~~~~I~HgG~~s----~~eal~~GvP~l~~-P~~~D--Q-~~na~~v~~~G~G~~l 404 (472)
+.+++++--.-... +.+++.+|++++|= |+..+ + ..-...+++.|+-+.+
T Consensus 63 ~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v 120 (344)
T 3ezy_A 63 PNVDAVLVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFT 120 (344)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCEEEEcCCCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEE
Confidence 78888887665553 66789999998874 65532 2 2233334555765555
No 337
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=20.82 E-value=45 Score=29.03 Aligned_cols=30 Identities=20% Similarity=0.330 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCC-CeEEEEE
Q 012061 11 PHVALIPSAGMGHLTPFLRLAASLVQHH-CRVTLIT 45 (472)
Q Consensus 11 ~~il~~~~~~~GHi~P~l~La~~L~~rG-h~Vt~~~ 45 (472)
|+|.|+..+..|. .+|+.|.+.| |+|+++.
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~~v~~~~ 31 (263)
T 1yqg_A 1 MNVYFLGGGNMAA-----AVAGGLVKQGGYRIYIAN 31 (263)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHHCSCEEEEEC
T ss_pred CEEEEECchHHHH-----HHHHHHHHCCCCeEEEEC
Confidence 6899998777664 5788899999 9998874
No 338
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=20.67 E-value=75 Score=28.51 Aligned_cols=31 Identities=16% Similarity=0.274 Sum_probs=25.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
.|+|.|+..+..|. .+|+.|.+.||+|+++.
T Consensus 30 ~~~I~iIG~G~mG~-----~~a~~l~~~g~~V~~~~ 60 (316)
T 2uyy_A 30 DKKIGFLGLGLMGS-----GIVSNLLKMGHTVTVWN 60 (316)
T ss_dssp SSCEEEECCSHHHH-----HHHHHHHHTTCCEEEEC
T ss_pred CCeEEEEcccHHHH-----HHHHHHHhCCCEEEEEe
Confidence 47899999887774 57889999999998774
No 339
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=20.62 E-value=1.3e+02 Score=24.19 Aligned_cols=27 Identities=19% Similarity=0.144 Sum_probs=21.8
Q ss_pred eEEEeecccccCCHHHHHHHHHHHHhC
Q 012061 276 VVYVSFGSRLALSMEQTKELGDGLLSS 302 (472)
Q Consensus 276 ~v~vs~GS~~~~~~~~~~~~~~al~~~ 302 (472)
.+|+++||......+.+...+.+|.+.
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~ 32 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEY 32 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHS
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcC
Confidence 699999998655677788888888874
No 340
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=20.54 E-value=2.3e+02 Score=22.88 Aligned_cols=39 Identities=15% Similarity=0.226 Sum_probs=30.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcCC
Q 012061 9 SHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYP 48 (472)
Q Consensus 9 ~~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~~ 48 (472)
+.++|+++-+++.. ..-+....+.|.+.|++|+++++..
T Consensus 8 ~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 8 TGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp TTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 44689999887644 4566777888999999999998753
No 341
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=20.48 E-value=4.3e+02 Score=23.93 Aligned_cols=61 Identities=10% Similarity=0.106 Sum_probs=39.4
Q ss_pred cCCChHHHhcccCcCcEEeecCcc----hHHHHHHhCCcEEe-cCCccc--c-hhhHHHHHhhCeeeEE
Q 012061 344 NWVDQDKVLSHRAVGGFVSHGGWN----SLVEAARHGVPLLV-WPHFGD--Q-KINAEAVERAGLGMWV 404 (472)
Q Consensus 344 ~~~pq~~ll~~~~~~~~I~HgG~~----s~~eal~~GvP~l~-~P~~~D--Q-~~na~~v~~~G~G~~l 404 (472)
-+-+..++|..+++++++--.... -+.+++.+|++++| =|+..+ + ..-...+++.|+-+.+
T Consensus 53 ~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v 121 (358)
T 3gdo_A 53 VVHELEEITNDPAIELVIVTTPSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSV 121 (358)
T ss_dssp EESSTHHHHTCTTCCEEEECSCTTTHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred eECCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEEE
Confidence 355778889878888888655544 46788999999998 365432 2 2223334445665555
No 342
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=20.38 E-value=2.9e+02 Score=27.05 Aligned_cols=28 Identities=21% Similarity=0.303 Sum_probs=23.3
Q ss_pred CcCcEEeecCcc------hHHHHHHhCCcEEecC
Q 012061 356 AVGGFVSHGGWN------SLVEAARHGVPLLVWP 383 (472)
Q Consensus 356 ~~~~~I~HgG~~------s~~eal~~GvP~l~~P 383 (472)
...++++|.|-| .+.||-+.++|+|++-
T Consensus 66 ~~~v~~~TsGpG~~N~~~gi~~A~~~~vPvl~it 99 (549)
T 3eya_A 66 ELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIA 99 (549)
T ss_dssp SCEEEEECTTHHHHTTHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEeCCCCcHhhhHHHHHHHHhhCCCEEEEe
Confidence 345689999965 8999999999999973
No 343
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=20.38 E-value=1.3e+02 Score=23.96 Aligned_cols=27 Identities=33% Similarity=0.420 Sum_probs=21.1
Q ss_pred eEEEeecccccCCHHHHHHHHHHHHhC
Q 012061 276 VVYVSFGSRLALSMEQTKELGDGLLSS 302 (472)
Q Consensus 276 ~v~vs~GS~~~~~~~~~~~~~~al~~~ 302 (472)
+.|+++||......+.++..+.+|.+.
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~ 28 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDI 28 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcC
Confidence 579999998655567778888888764
No 344
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=20.26 E-value=1.3e+02 Score=24.05 Aligned_cols=28 Identities=21% Similarity=0.332 Sum_probs=22.4
Q ss_pred eEEEeecccccCCHHHHHHHHHHHHhCC
Q 012061 276 VVYVSFGSRLALSMEQTKELGDGLLSSG 303 (472)
Q Consensus 276 ~v~vs~GS~~~~~~~~~~~~~~al~~~~ 303 (472)
.+|+++||......+.+...+.+|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 5899999986556777888888888753
No 345
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=20.25 E-value=1.5e+02 Score=30.03 Aligned_cols=56 Identities=11% Similarity=0.083 Sum_probs=39.8
Q ss_pred HHHHHHhHhhhhhhcCCCCcEEEEcCCChhhhHHHHHhcCCCeEEEeCccHHHHHH
Q 012061 93 WEAIRRSAHLLAPLLSPPLSALITDVTLISAVLPVTINLHLPNYVLFTASAKMFSL 148 (472)
Q Consensus 93 ~~~~~~~~~~~~~ll~~~~D~vI~D~~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~ 148 (472)
...+.+....+.++++.+|++|++|.+=.+.....|+++++|.+.+..-.+...+.
T Consensus 339 ~~~~~~~~~~~~~l~~~~p~~i~~D~HP~y~st~~a~~~~~~~~~vQHHhAH~~a~ 394 (657)
T 3ttc_A 339 QTQWREALRLMQNIYNFTPQYVVHDAHPGYVSCQWASEMNLPTQTVLHHHAHAAAC 394 (657)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEEEESCTTCHHHHHHTTSCSCEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEcCCCCchHHHHHHHcCCCeEEeeHHHHHHHHH
Confidence 34455556666677767899999999544456678999999988776665555444
No 346
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=20.24 E-value=1.5e+02 Score=24.29 Aligned_cols=34 Identities=15% Similarity=0.026 Sum_probs=27.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEE
Q 012061 12 HVALIPSAGMGHLTPFLRLAASLVQHHCRVTLIT 45 (472)
Q Consensus 12 ~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~ 45 (472)
.++++-.+..|.-.-+..+++.|+++|+.|..+-
T Consensus 29 p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d 62 (236)
T 1zi8_A 29 PVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPD 62 (236)
T ss_dssp EEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecc
Confidence 4555556666777889999999999999888774
No 347
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=20.10 E-value=1.6e+02 Score=24.78 Aligned_cols=34 Identities=12% Similarity=0.180 Sum_probs=23.5
Q ss_pred CEEEEEcCCCccCh----HHHHHHHHHHHhCCCeEEEE
Q 012061 11 PHVALIPSAGMGHL----TPFLRLAASLVQHHCRVTLI 44 (472)
Q Consensus 11 ~~il~~~~~~~GHi----~P~l~La~~L~~rGh~Vt~~ 44 (472)
..|.+++....+-- .-...|++.|+++|+.|+.=
T Consensus 14 ~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsG 51 (215)
T 2a33_A 14 RRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYG 51 (215)
T ss_dssp SEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEEC
Confidence 36999966655532 34567888889999877543
No 348
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=20.07 E-value=1.2e+02 Score=26.23 Aligned_cols=32 Identities=13% Similarity=-0.014 Sum_probs=25.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEc
Q 012061 12 HVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITT 46 (472)
Q Consensus 12 ~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~ 46 (472)
++++++.++.| =-..+|+.|+++|++|.++..
T Consensus 12 k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 12 KVIVIAGGIKN---LGALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp CEEEEETCSSH---HHHHHHHHHTTSSCEEEEEES
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCEEEEEec
Confidence 67888887755 357899999999999998753
No 349
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=20.04 E-value=76 Score=27.16 Aligned_cols=21 Identities=24% Similarity=0.249 Sum_probs=17.9
Q ss_pred HHHHHHHHHhCCCeEEEEEcC
Q 012061 27 FLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 27 ~l~La~~L~~rGh~Vt~~~~~ 47 (472)
-.++|++|+++|++|+++..+
T Consensus 37 G~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 37 GFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHCCCEEEEEECC
Confidence 467899999999999998654
No 350
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=20.00 E-value=1.2e+02 Score=26.90 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=24.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEEcC
Q 012061 10 HPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTY 47 (472)
Q Consensus 10 ~~~il~~~~~~~GHi~P~l~La~~L~~rGh~Vt~~~~~ 47 (472)
+++|+++.. .|.+ -..|++.|.++||+|+.++-.
T Consensus 7 ~~~vlVtGa--tG~i--G~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILITGG--AGFI--GGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEEETT--TSHH--HHHHHHHHHHTTCCEEEECCC
T ss_pred CCeEEEECC--CChH--HHHHHHHHHHCCCEEEEEecC
Confidence 457776654 2433 357899999999999988643
Done!