Query         012062
Match_columns 472
No_of_seqs    350 out of 2366
Neff          8.5 
Searched_HMMs 29240
Date          Mon Mar 25 20:52:25 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012062.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012062hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4fih_A Serine/threonine-protei 100.0 7.4E-57 2.5E-61  448.7  23.6  238    1-287    92-330 (346)
  2 4b99_A Mitogen-activated prote 100.0 9.1E-57 3.1E-61  458.5  24.3  278    1-289    72-353 (398)
  3 3hyh_A Carbon catabolite-derep 100.0 6.5E-57 2.2E-61  436.5  21.7  237    1-286    31-268 (275)
  4 4b9d_A Serine/threonine-protei 100.0 3.5E-57 1.2E-61  451.7  17.5  239    1-286    42-282 (350)
  5 4aw0_A HPDK1, 3-phosphoinositi 100.0   1E-56 3.6E-61  441.3  17.8  238    1-286    50-296 (311)
  6 4fie_A Serine/threonine-protei 100.0 8.7E-56   3E-60  451.6  24.4  238    1-287   169-407 (423)
  7 3ubd_A Ribosomal protein S6 ki 100.0 4.2E-55 1.4E-59  429.5  16.1  233    5-286    49-287 (304)
  8 3fpq_A Serine/threonine-protei 100.0 1.8E-54   6E-59  422.9  19.2  241    1-286    44-288 (290)
  9 4g3f_A NF-kappa-beta-inducing  100.0 4.9E-54 1.7E-58  427.1  18.0  234    1-286    76-328 (336)
 10 4f9c_A Cell division cycle 7-r 100.0 5.5E-52 1.9E-56  418.5  18.5  257    6-286    47-358 (361)
 11 3uto_A Twitchin; kinase, muscl 100.0 6.6E-51 2.2E-55  434.2  22.9  244    1-291   175-421 (573)
 12 4g31_A Eukaryotic translation  100.0 5.1E-51 1.7E-55  401.1  19.7  249    1-286    23-285 (299)
 13 3omv_A RAF proto-oncogene seri 100.0 1.1E-49 3.6E-54  392.0  21.3  232    8-280    58-293 (307)
 14 3niz_A Rhodanese family protei 100.0 6.3E-49 2.2E-53  388.6  24.1  267    2-286    40-306 (311)
 15 4aoj_A High affinity nerve gro 100.0 6.3E-49 2.2E-53  390.9  21.0  229    4-280    67-312 (329)
 16 4asz_A BDNF/NT-3 growth factor 100.0 2.8E-49 9.7E-54  388.3  17.9  228    5-280    40-282 (299)
 17 3v5w_A G-protein coupled recep 100.0   5E-49 1.7E-53  419.5  20.3  236    1-286   207-455 (689)
 18 3o0g_A Cell division protein k 100.0 2.9E-48 9.8E-53  379.7  23.7  268    1-286    20-288 (292)
 19 3mi9_A Cell division protein k 100.0 1.2E-47 4.2E-52  385.2  26.9  284    1-292    35-323 (351)
 20 4gt4_A Tyrosine-protein kinase 100.0 2.3E-48 7.8E-53  383.5  21.0  231    4-281    52-300 (308)
 21 1ob3_A PFPK5, cell division co 100.0 7.5E-48 2.6E-52  376.1  22.8  266    2-286    21-286 (288)
 22 3gbz_A Kinase, CMGC CDK; ssgci 100.0 8.9E-48 3.1E-52  383.2  21.7  269    1-287    52-325 (329)
 23 2pmi_A Negative RE, cyclin-dep 100.0 2.5E-47 8.6E-52  378.0  24.4  268    1-286    23-299 (317)
 24 1ua2_A CAK, cell division prot 100.0 7.6E-47 2.6E-51  379.1  26.1  273    1-292    28-303 (346)
 25 3mtl_A Cell division protein k 100.0 8.7E-48   3E-52  382.4  18.2  268    1-286    20-287 (324)
 26 3rp9_A Mitogen-activated prote 100.0 1.7E-47 5.9E-52  398.3  20.2  274    1-287    71-403 (458)
 27 3g33_A Cell division protein k 100.0 3.2E-46 1.1E-50  367.9  26.4  269    1-286    27-302 (308)
 28 3oz6_A Mitogen-activated prote 100.0 1.5E-46 5.2E-51  382.7  23.9  270    1-286    27-334 (388)
 29 3fe3_A MAP/microtubule affinit 100.0 1.9E-46 6.6E-51  373.8  24.1  238    1-287    33-271 (328)
 30 3ttj_A Mitogen-activated prote 100.0 6.3E-47 2.2E-51  394.6  21.1  270    1-286    80-361 (464)
 31 2r3i_A Cell division protein k 100.0 1.1E-45 3.8E-50  361.9  25.8  269    1-287    21-290 (299)
 32 3n9x_A Phosphotransferase; mal 100.0 2.1E-46   7E-51  387.4  21.0  274    1-287    44-368 (432)
 33 4ase_A Vascular endothelial gr 100.0 6.7E-47 2.3E-51  379.5  16.3  231    6-281    92-341 (353)
 34 1cm8_A Phosphorylated MAP kina 100.0 2.2E-46 7.5E-51  379.1  19.2  270    1-287    43-314 (367)
 35 3zgw_A Maternal embryonic leuc 100.0 3.6E-46 1.2E-50  374.6  20.5  239    1-287    28-267 (347)
 36 2yab_A Death-associated protei 100.0 1.7E-45 5.7E-50  371.8  25.1  240    1-286    30-278 (361)
 37 3rgf_A Cyclin-dependent kinase 100.0 7.5E-46 2.6E-50  379.9  22.6  269    5-291    45-344 (405)
 38 2fst_X Mitogen-activated prote 100.0 6.8E-46 2.3E-50  375.5  18.5  271    1-288    47-319 (367)
 39 2bdw_A Hypothetical protein K1 100.0 4.4E-45 1.5E-49  368.9  23.6  240    1-286    47-290 (362)
 40 1o6l_A RAC-beta serine/threoni 100.0 4.2E-45 1.4E-49  365.5  22.7  237    1-286    23-266 (337)
 41 3soa_A Calcium/calmodulin-depe 100.0 6.1E-45 2.1E-49  377.3  23.9  240    1-285    29-272 (444)
 42 4agu_A Cyclin-dependent kinase 100.0 2.5E-45 8.5E-50  361.7  20.0  269    1-286    21-290 (311)
 43 3fxz_A Serine/threonine-protei 100.0 1.4E-44 4.9E-49  355.0  24.4  237    1-286    38-275 (297)
 44 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.6E-45 5.6E-50  370.8  17.5  237    1-286    41-286 (353)
 45 2y0a_A Death-associated protei 100.0 3.6E-44 1.2E-48  356.9  26.8  240    1-286    29-277 (326)
 46 1tki_A Titin; serine kinase, m 100.0 1.4E-45 4.7E-50  366.5  15.9  239    1-287    23-264 (321)
 47 4aaa_A Cyclin-dependent kinase 100.0   3E-45   1E-49  365.0  18.0  269    1-286    43-312 (331)
 48 3tki_A Serine/threonine-protei 100.0 3.2E-44 1.1E-48  356.9  25.4  242    1-287    25-268 (323)
 49 1fot_A TPK1 delta, CAMP-depend 100.0 1.7E-44 5.8E-49  358.2  22.6  234    1-286    24-264 (318)
 50 3qyz_A Mitogen-activated prote 100.0 7.7E-45 2.6E-49  367.0  20.2  273    1-287    45-320 (364)
 51 1j1b_A Glycogen synthase kinas 100.0 7.3E-45 2.5E-49  374.5  20.3  266    1-286    72-342 (420)
 52 2zv2_A Calcium/calmodulin-depe 100.0 2.5E-44 8.6E-49  352.7  22.6  241    1-285    31-297 (298)
 53 2eue_A Carbon catabolite derep 100.0 2.1E-44 7.1E-49  349.0  20.9  237    1-286    31-268 (275)
 54 2xrw_A Mitogen-activated prote 100.0 2.5E-45 8.4E-50  371.8  13.6  270    1-286    43-324 (371)
 55 1kob_A Twitchin; kinase, intra 100.0 6.1E-44 2.1E-48  363.6  24.0  240    1-287    69-311 (387)
 56 4dc2_A Protein kinase C IOTA t 100.0 4.5E-44 1.5E-48  365.3  22.6  237    1-286    70-324 (396)
 57 3c0i_A Peripheral plasma membr 100.0 2.5E-44 8.4E-49  361.8  20.2  241    1-286    42-292 (351)
 58 4exu_A Mitogen-activated prote 100.0 1.8E-44 6.3E-49  365.4  19.5  268    1-286    60-329 (371)
 59 3gni_B Strad alpha; kinase fol 100.0 2.5E-44 8.5E-49  366.4  20.4  270    1-286    45-339 (389)
 60 3v8s_A RHO-associated protein  100.0 1.9E-44 6.6E-49  369.7  19.4  242    1-286    87-335 (410)
 61 3eb0_A Putative uncharacterize 100.0 3.4E-44 1.1E-48  364.9  20.7  275    1-285    25-326 (383)
 62 1xjd_A Protein kinase C, theta 100.0 1.9E-44 6.6E-49  361.8  18.5  237    1-286    35-275 (345)
 63 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.7E-45 5.8E-50  368.1  10.8  238    1-287    27-265 (336)
 64 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.9E-44 1.3E-48  360.3  20.8  234    1-286    59-299 (350)
 65 4aw2_A Serine/threonine-protei 100.0 2.3E-44 7.7E-49  372.1  19.4  245    1-286    92-344 (437)
 66 2y94_A 5'-AMP-activated protei 100.0 9.6E-44 3.3E-48  371.0  23.7  238    1-287    34-273 (476)
 67 3a8x_A Protein kinase C IOTA t 100.0 7.4E-44 2.5E-48  357.6  21.6  237    1-286    27-281 (345)
 68 2x4f_A Myosin light chain kina 100.0   3E-44   1E-48  364.2  18.8  238    1-285   107-347 (373)
 69 2vd5_A DMPK protein; serine/th 100.0 2.7E-44 9.3E-49  368.9  18.4  244    1-286    79-333 (412)
 70 3e3p_A Protein kinase, putativ 100.0 5.8E-44   2E-48  359.1  20.3  272    1-288    41-322 (360)
 71 3kvw_A DYRK2, dual specificity 100.0 5.4E-44 1.9E-48  369.0  20.3  262    1-286   115-414 (429)
 72 2i0e_A Protein kinase C-beta I 100.0 6.1E-44 2.1E-48  359.3  19.7  237    1-286    38-282 (353)
 73 2c30_A Serine/threonine-protei 100.0 5.3E-43 1.8E-47  347.7  25.9  238    1-287    63-301 (321)
 74 2w4o_A Calcium/calmodulin-depe 100.0 6.4E-43 2.2E-47  351.3  26.7  237    1-287    71-312 (349)
 75 1blx_A Cyclin-dependent kinase 100.0 2.7E-43 9.1E-48  349.2  23.4  268    2-286    30-302 (326)
 76 2b9h_A MAP kinase FUS3, mitoge 100.0 2.3E-43 7.9E-48  353.8  22.2  274    1-288    29-313 (353)
 77 3pg1_A Mitogen-activated prote 100.0 1.9E-43 6.4E-48  356.0  21.6  272    2-287    41-323 (362)
 78 3llt_A Serine/threonine kinase 100.0 1.1E-43 3.8E-48  357.4  19.5  261    1-285    53-360 (360)
 79 4e7w_A Glycogen synthase kinas 100.0 9.8E-44 3.4E-48  363.1  19.3  264    2-286    59-327 (394)
 80 3a62_A Ribosomal protein S6 ki 100.0 2.5E-43 8.6E-48  350.9  21.7  233    5-286    42-282 (327)
 81 2a2a_A Death-associated protei 100.0 7.5E-43 2.6E-47  346.1  24.8  240    1-286    30-278 (321)
 82 2r5t_A Serine/threonine-protei 100.0   1E-43 3.6E-48  360.1  18.9  237    1-286    56-299 (373)
 83 3p1a_A MYT1 kinase, membrane-a 100.0 1.2E-43 4.2E-48  350.5  18.9  235    1-286    75-310 (311)
 84 1u5q_A Serine/threonine protei 100.0 1.5E-43 5.1E-48  355.8  19.7  237    1-286    72-311 (348)
 85 2qr7_A Ribosomal protein S6 ki 100.0 2.1E-43   7E-48  354.0  20.2  235    1-286    40-283 (342)
 86 4fr4_A YANK1, serine/threonine 100.0 4.1E-43 1.4E-47  356.9  22.6  237    1-286    33-277 (384)
 87 3nyv_A Calmodulin-domain prote 100.0 2.8E-43 9.4E-48  369.1  22.0  239    1-286    44-287 (484)
 88 3hmm_A TGF-beta receptor type- 100.0 6.7E-44 2.3E-48  351.4  16.2  236    6-280    24-290 (303)
 89 3lij_A Calcium/calmodulin depe 100.0 3.4E-43 1.2E-47  369.5  22.6  239    1-286    55-297 (494)
 90 3coi_A Mitogen-activated prote 100.0 9.9E-44 3.4E-48  357.2  17.7  269    1-287    42-312 (353)
 91 3uc3_A Serine/threonine-protei 100.0 2.3E-43   8E-48  356.1  20.5  241    1-287    38-281 (361)
 92 3lm5_A Serine/threonine-protei 100.0   1E-42 3.6E-47  346.3  24.7  242    1-287    47-294 (327)
 93 3kk8_A Calcium/calmodulin depe 100.0 5.3E-43 1.8E-47  340.3  21.8  240    1-286    24-267 (284)
 94 4ejn_A RAC-alpha serine/threon 100.0   1E-43 3.5E-48  368.6  17.7  237    1-286   166-410 (446)
 95 3kn6_A Ribosomal protein S6 ki 100.0 3.9E-43 1.3E-47  349.4  20.7  237    1-287    29-277 (325)
 96 3mwu_A Calmodulin-domain prote 100.0 2.5E-43 8.5E-48  369.7  19.9  239    1-286    40-282 (486)
 97 2i6l_A Mitogen-activated prote 100.0   8E-44 2.8E-48  351.3  14.8  283    1-290    29-315 (320)
 98 3f3z_A Calcium/calmodulin-depe 100.0 1.1E-42 3.8E-47  337.0  21.6  236    1-285    27-266 (277)
 99 2ac3_A MAP kinase-interacting  100.0 5.6E-43 1.9E-47  345.6  19.2  241    1-286    31-301 (316)
100 3is5_A Calcium-dependent prote 100.0 1.6E-42 5.6E-47  337.9  22.1  238    1-286    40-284 (285)
101 2yex_A Serine/threonine-protei 100.0 3.2E-42 1.1E-46  333.2  23.8  240    1-286    25-267 (276)
102 3hko_A Calcium/calmodulin-depe 100.0 7.6E-43 2.6E-47  348.9  19.8  244    1-286    44-336 (345)
103 3cok_A Serine/threonine-protei 100.0   9E-43 3.1E-47  337.8  18.7  238    1-286    29-268 (278)
104 3q5i_A Protein kinase; CDPK, m 100.0 1.4E-42 4.7E-47  365.7  21.0  239    1-286    54-307 (504)
105 1nxk_A MAP kinase-activated pr 100.0   9E-43 3.1E-47  356.6  19.0  239    1-287    80-328 (400)
106 2y7j_A Phosphorylase B kinase  100.0 1.9E-42 6.4E-47  350.0  21.0  240    1-285   112-364 (365)
107 3fdn_A Serine/threonine-protei 100.0 8.7E-43   3E-47  338.3  17.8  235    1-286    27-263 (279)
108 3pfq_A PKC-B, PKC-beta, protei 100.0 1.3E-42 4.6E-47  377.4  21.2  237    1-286   359-603 (674)
109 2owb_A Serine/threonine-protei 100.0 2.3E-42   8E-47  344.9  20.6  240    1-289    59-300 (335)
110 3dls_A PAS domain-containing s 100.0 9.3E-43 3.2E-47  348.1  16.9  231    1-286    42-280 (335)
111 3fme_A Dual specificity mitoge 100.0 1.2E-42 4.1E-47  338.6  17.2  239    1-285    25-271 (290)
112 2rku_A Serine/threonine-protei 100.0   4E-42 1.4E-46  336.2  20.9  240    1-289    33-274 (294)
113 2vgo_A Serine/threonine-protei 100.0   2E-42   7E-47  336.6  18.7  235    1-286    32-268 (284)
114 3qd2_B Eukaryotic translation  100.0 4.6E-42 1.6E-46  340.5  21.4  252    1-285    24-330 (332)
115 2vx3_A Dual specificity tyrosi 100.0   2E-42 6.8E-47  351.7  19.2  260    1-286    72-378 (382)
116 2jam_A Calcium/calmodulin-depe 100.0 3.2E-42 1.1E-46  338.6  20.0  237    1-286    27-267 (304)
117 1wak_A Serine/threonine-protei 100.0 1.3E-42 4.5E-47  353.2  17.8  264    1-285    55-396 (397)
118 3c4z_A Rhodopsin kinase; Ser/T 100.0 5.1E-42 1.7E-46  362.5  22.6  238    1-286   203-454 (543)
119 3nsz_A CK II alpha, casein kin 100.0 1.2E-41 4.1E-46  338.1  23.9  261    1-286    54-325 (330)
120 3i6u_A CDS1, serine/threonine- 100.0 4.2E-42 1.4E-46  353.8  21.2  241    1-286   153-405 (419)
121 2acx_A G protein-coupled recep 100.0 1.3E-42 4.5E-47  368.3  17.4  237    1-286   202-450 (576)
122 3com_A Serine/threonine-protei 100.0   5E-42 1.7E-46  338.5  20.4  237    1-286    47-284 (314)
123 2zmd_A Dual specificity protei 100.0   4E-42 1.4E-46  350.7  19.5  239    2-287    75-327 (390)
124 3dbq_A Dual specificity protei 100.0 3.6E-42 1.2E-46  344.7  18.8  239    2-287    28-280 (343)
125 1t4h_A Serine/threonine-protei 100.0 5.2E-42 1.8E-46  334.7  19.4  241    1-286    44-288 (290)
126 3bhy_A Death-associated protei 100.0 7.9E-42 2.7E-46  331.8  20.5  239    1-285    23-270 (283)
127 2j7t_A Serine/threonine-protei 100.0 1.2E-41   4E-46  333.7  21.8  240    1-286    37-281 (302)
128 1phk_A Phosphorylase kinase; g 100.0   9E-42 3.1E-46  333.9  20.9  241    1-286    35-289 (298)
129 1x8b_A WEE1HU, WEE1-like prote 100.0 3.5E-42 1.2E-46  334.0  17.4  233    1-286    29-285 (289)
130 4eqm_A Protein kinase; transfe 100.0 5.4E-42 1.9E-46  336.0  18.7  240    1-283    29-270 (294)
131 2wtk_C Serine/threonine-protei 100.0 1.1E-41 3.7E-46  334.4  20.5  242    2-287    24-270 (305)
132 2h6d_A 5'-AMP-activated protei 100.0 3.9E-42 1.3E-46  332.8  16.9  237    1-286    29-267 (276)
133 1vzo_A Ribosomal protein S6 ki 100.0 2.3E-42 7.7E-47  348.0  15.3  235    5-286    79-327 (355)
134 2izr_A Casein kinase I isoform 100.0 3.4E-41 1.2E-45  335.5  23.2  233    1-280    27-274 (330)
135 3ork_A Serine/threonine protei 100.0 7.7E-43 2.6E-47  344.5  11.1  245    1-285    30-278 (311)
136 1z57_A Dual specificity protei 100.0 8.3E-42 2.8E-46  339.3  18.6  261    2-286    33-334 (339)
137 2wei_A Calmodulin-domain prote 100.0 1.5E-41 5.2E-46  331.1  19.8  238    1-285    40-281 (287)
138 2vwi_A Serine/threonine-protei 100.0 4.9E-42 1.7E-46  336.1  16.3  248    2-286    34-293 (303)
139 3an0_A Dual specificity mitoge 100.0 5.2E-42 1.8E-46  342.5  16.3  239    1-286    69-316 (340)
140 2ycf_A Serine/threonine-protei 100.0 2.7E-41 9.3E-46  334.9  20.9  239    1-285    28-279 (322)
141 3byv_A Rhoptry kinase; malaria 100.0 2.8E-43 9.6E-48  357.3   6.5  244    1-284    91-363 (377)
142 2eu9_A Dual specificity protei 100.0 1.3E-41 4.4E-46  340.4  18.4  261    2-286    38-339 (355)
143 3a7i_A MST3 kinase, serine/thr 100.0 7.8E-41 2.7E-45  328.4  23.3  235    2-286    41-276 (303)
144 4euu_A Serine/threonine-protei 100.0   3E-41   1E-45  334.2  19.9  259    1-282    27-304 (319)
145 3eqc_A Dual specificity mitoge 100.0 8.5E-42 2.9E-46  343.8  15.8  263    1-285    51-329 (360)
146 2w5a_A Serine/threonine-protei 100.0 2.7E-41 9.1E-46  327.4  18.6  240    2-286    25-273 (279)
147 3p86_A Serine/threonine-protei 100.0 7.1E-41 2.4E-45  330.7  21.8  229    6-280    58-291 (309)
148 4hcu_A Tyrosine-protein kinase 100.0 4.4E-41 1.5E-45  324.6  19.4  230    2-281    29-260 (269)
149 2pml_X PFPK7, Ser/Thr protein  100.0 8.2E-41 2.8E-45  334.5  20.9  253    2-286    50-328 (348)
150 3kul_A Ephrin type-A receptor  100.0 5.3E-41 1.8E-45  333.9  19.2  232    2-280    68-306 (325)
151 3p23_A Serine/threonine-protei 100.0 4.8E-41 1.6E-45  347.1  19.2  237    2-286    42-289 (432)
152 1csn_A Casein kinase-1; phosph 100.0   2E-40   7E-45  324.1  22.6  234    1-280    28-276 (298)
153 2x7f_A TRAF2 and NCK-interacti 100.0 1.3E-40 4.5E-45  330.0  21.1  244    1-286    42-292 (326)
154 2dyl_A Dual specificity mitoge 100.0   1E-40 3.4E-45  329.3  19.8  240    1-285    43-288 (318)
155 1q8y_A SR protein kinase; tran 100.0 4.5E-41 1.5E-45  339.4  17.5  265    1-286    37-339 (373)
156 1zy4_A Serine/threonine-protei 100.0 9.7E-41 3.3E-45  326.4  19.3  251    1-286    24-289 (303)
157 3lb7_A RAF proto-oncogene seri 100.0 2.4E-40 8.2E-45  326.5  21.8  237    7-284    57-297 (307)
158 2clq_A Mitogen-activated prote 100.0 2.1E-40 7.2E-45  323.5  21.1  240    1-286    40-284 (295)
159 3q60_A ROP5B; pseudokinase, tr 100.0 2.9E-42 9.9E-47  349.0   7.9  258    1-284    80-356 (371)
160 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.5E-40 5.1E-45  320.4  19.4  227    6-281    30-258 (268)
161 3s95_A LIMK-1, LIM domain kina 100.0 1.9E-40 6.5E-45  326.9  20.2  234    1-280    28-275 (310)
162 2psq_A Fibroblast growth facto 100.0 1.6E-40 5.4E-45  336.5  20.2  229    6-281   111-358 (370)
163 3gen_A Tyrosine-protein kinase 100.0 1.3E-40 4.5E-45  323.4  18.8  227    6-281    46-274 (283)
164 3l9p_A Anaplastic lymphoma kin 100.0 1.3E-40 4.6E-45  336.6  17.2  234    4-284    97-342 (367)
165 1mp8_A Focal adhesion kinase 1 100.0 1.9E-40 6.4E-45  322.4  17.0  226    7-280    42-269 (281)
166 2rio_A Serine/threonine-protei 100.0 3.1E-40   1E-44  341.4  19.4  238    3-286    34-301 (434)
167 3qup_A Tyrosine-protein kinase 100.0 1.7E-40 5.9E-45  328.9  16.8  245    2-286    42-304 (323)
168 3vhe_A Vascular endothelial gr 100.0 2.9E-40   1E-44  332.0  17.4  233    4-281    48-349 (359)
169 4f0f_A Serine/threonine-protei 100.0 1.9E-39 6.4E-44  315.9  22.2  230    1-280    37-282 (287)
170 3tt0_A Basic fibroblast growth 100.0 1.1E-39 3.7E-44  331.6  21.2  228    7-281   100-346 (382)
171 3cbl_A C-FES, proto-oncogene t 100.0 2.1E-40 7.2E-45  336.4  15.8  232    2-280   133-367 (377)
172 3kfa_A Tyrosine-protein kinase 100.0 5.8E-40   2E-44  319.5  18.3  231    1-280    31-264 (288)
173 4hgt_A Casein kinase I isoform 100.0 7.8E-40 2.7E-44  319.4  19.1  235    1-280    27-273 (296)
174 3t9t_A Tyrosine-protein kinase 100.0 5.6E-40 1.9E-44  315.8  17.8  230    2-281    27-258 (267)
175 1luf_A Muscle-specific tyrosin 100.0 4.3E-40 1.5E-44  328.5  17.5  229    6-281    75-329 (343)
176 3uzp_A CKI-delta, CKID, casein 100.0 3.1E-39 1.1E-43  315.4  22.8  235    1-280    27-273 (296)
177 2h34_A Serine/threonine-protei 100.0 5.5E-40 1.9E-44  323.9  17.2  235    1-280    52-289 (309)
178 3kex_A Receptor tyrosine-prote 100.0 5.7E-40   2E-44  326.1  17.1  232    2-281    32-270 (325)
179 2qol_A Ephrin receptor; recept 100.0 1.1E-39 3.8E-44  330.7  19.3  228    6-280    71-302 (373)
180 3cek_A Dual specificity protei 100.0   9E-40 3.1E-44  322.5  18.0  239    2-287    47-299 (313)
181 3a99_A Proto-oncogene serine/t 100.0 5.3E-40 1.8E-44  325.8  15.8  230    1-286    61-299 (320)
182 3og7_A AKAP9-BRAF fusion prote 100.0   2E-39 6.7E-44  316.6  19.5  233    7-280    45-281 (289)
183 3ugc_A Tyrosine-protein kinase 100.0 4.3E-40 1.5E-44  321.9  14.6  247    4-280    35-284 (295)
184 3poz_A Epidermal growth factor 100.0 1.1E-39 3.7E-44  324.5  17.7  232    2-281    34-272 (327)
185 1u59_A Tyrosine-protein kinase 100.0 2.8E-39 9.7E-44  315.0  20.0  229    5-281    34-266 (287)
186 2ivs_A Proto-oncogene tyrosine 100.0 7.6E-40 2.6E-44  322.4  16.1  230    5-281    50-305 (314)
187 3cc6_A Protein tyrosine kinase 100.0 9.8E-40 3.4E-44  317.1  16.6  227    7-281    39-267 (281)
188 4fvq_A Tyrosine-protein kinase 100.0 7.2E-40 2.5E-44  319.0  15.6  226    2-281    27-269 (289)
189 1opk_A P150, C-ABL, proto-onco 100.0 1.5E-39   5E-44  341.8  19.1  230    2-280   239-471 (495)
190 1rjb_A FL cytokine receptor; k 100.0 1.7E-39 5.9E-44  324.6  18.5  231    5-281    72-328 (344)
191 3aln_A Dual specificity mitoge 100.0 5.9E-40   2E-44  325.9  15.0  242    1-285    40-290 (327)
192 3dtc_A Mitogen-activated prote 100.0 3.3E-39 1.1E-43  311.3  19.7  226    6-281    28-267 (271)
193 1mqb_A Ephrin type-A receptor  100.0 4.7E-39 1.6E-43  320.8  20.8  225    9-280    74-302 (333)
194 1t46_A HOMO sapiens V-KIT hard 100.0 2.1E-39 7.1E-44  319.2  17.9  232    4-281    49-301 (313)
195 3fhr_A MAP kinase-activated pr 100.0 6.5E-40 2.2E-44  327.5  14.4  242    1-287    47-294 (336)
196 2iwi_A Serine/threonine-protei 100.0 1.1E-39 3.6E-44  321.7  15.7  230    1-286    49-289 (312)
197 3ll6_A Cyclin G-associated kin 100.0 8.2E-40 2.8E-44  324.9  14.9  239    1-281    46-302 (337)
198 4e5w_A Tyrosine-protein kinase 100.0 2.6E-39 8.9E-44  317.0  18.3  242    4-280    46-295 (302)
199 2qkw_B Protein kinase; three-h 100.0   2E-39 6.8E-44  321.4  17.5  239    6-281    61-309 (321)
200 3sv0_A Casein kinase I-like; t 100.0   1E-38 3.5E-43  333.7  23.6  234    1-280    25-271 (483)
201 1xbb_A Tyrosine-protein kinase 100.0 2.8E-39 9.4E-44  315.7  17.7  230    3-280    39-272 (291)
202 1fvr_A Tyrosine-protein kinase 100.0 4.2E-39 1.4E-43  319.8  19.0  232    1-281    43-294 (327)
203 3lzb_A Epidermal growth factor 100.0 4.2E-39 1.5E-43  320.4  19.0  232    1-280    33-271 (327)
204 2pvf_A Fibroblast growth facto 100.0 7.9E-39 2.7E-43  319.0  20.0  229    6-281    65-312 (334)
205 3kmu_A ILK, integrin-linked ki 100.0 7.3E-39 2.5E-43  308.2  19.1  226    7-280    32-263 (271)
206 4eut_A Serine/threonine-protei 100.0 1.1E-39 3.8E-44  333.2  14.2  257    1-280    27-302 (396)
207 4fl3_A Tyrosine-protein kinase 100.0 3.8E-39 1.3E-43  348.0  19.0  229    4-280   392-624 (635)
208 3op5_A Serine/threonine-protei 100.0 5.1E-39 1.7E-43  324.4  18.6  240    7-280    64-322 (364)
209 3brb_A Proto-oncogene tyrosine 100.0 6.9E-39 2.4E-43  316.0  18.7  234    7-281    61-302 (313)
210 3pls_A Macrophage-stimulating  100.0 1.4E-38 4.9E-43  311.0  20.7  233    2-280    40-280 (298)
211 2xir_A Vascular endothelial gr 100.0 3.6E-39 1.2E-43  317.9  16.4  233    4-281    53-304 (316)
212 3uim_A Brassinosteroid insensi 100.0 4.5E-39 1.6E-43  319.2  17.2  244    6-282    52-306 (326)
213 1qpc_A LCK kinase; alpha beta  100.0 1.7E-38 5.7E-43  307.9  20.7  225    6-280    35-262 (279)
214 1p4o_A Insulin-like growth fac 100.0 3.8E-39 1.3E-43  319.0  16.4  229    6-281    53-293 (322)
215 2wqm_A Serine/threonine-protei 100.0 2.2E-38 7.5E-43  312.0  21.7  233    2-280    51-290 (310)
216 3f66_A Hepatocyte growth facto 100.0 1.1E-38 3.8E-43  312.2  19.4  227    8-280    53-284 (298)
217 3lxp_A Non-receptor tyrosine-p 100.0 7.8E-39 2.7E-43  316.9  18.2  236    2-280    54-303 (318)
218 2yfx_A Tyrosine-protein kinase 100.0 3.9E-39 1.3E-43  320.1  15.9  234    4-284    56-301 (327)
219 3lxl_A Tyrosine-protein kinase 100.0 3.1E-39   1E-43  320.8  15.1  236    4-281    48-297 (327)
220 2v62_A Serine/threonine-protei 100.0 9.9E-39 3.4E-43  319.9  18.9  242    2-280    56-321 (345)
221 1qcf_A Haematopoetic cell kina 100.0 6.8E-39 2.3E-43  333.2  17.8  224    7-280   211-437 (454)
222 2i1m_A Macrophage colony-stimu 100.0   7E-39 2.4E-43  318.7  16.4  233    2-280    65-319 (333)
223 2jii_A Serine/threonine-protei 100.0 6.2E-39 2.1E-43  322.2  16.0  244    7-280    74-329 (352)
224 3soc_A Activin receptor type-2 100.0 4.4E-39 1.5E-43  319.4  14.8  250    7-280    46-311 (322)
225 2ozo_A Tyrosine-protein kinase 100.0 2.5E-38 8.7E-43  340.5  21.6  227    6-280   361-591 (613)
226 2a19_B Interferon-induced, dou 100.0 1.1E-38 3.9E-43  309.3  16.7  243    1-286    29-273 (284)
227 3c1x_A Hepatocyte growth facto 100.0 1.1E-38 3.8E-43  323.3  16.3  227    9-281   118-349 (373)
228 1k9a_A Carboxyl-terminal SRC k 100.0 5.5E-38 1.9E-42  326.0  21.6  222    6-280   214-438 (450)
229 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.9E-38 6.6E-43  313.3  17.0  228    9-281    56-296 (319)
230 2buj_A Serine/threonine-protei 100.0 7.6E-39 2.6E-43  316.1  14.0  238    1-281    47-300 (317)
231 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.3E-38 7.7E-43  329.1  18.1  227    8-284   208-439 (452)
232 1u46_A ACK-1, activated CDC42  100.0 1.5E-38   5E-43  309.8  15.5  225   10-280    48-277 (291)
233 3q4u_A Activin receptor type-1 100.0 5.3E-38 1.8E-42  307.4  18.1  234    6-280    29-295 (301)
234 2nru_A Interleukin-1 receptor- 100.0 2.8E-38 9.6E-43  310.6  16.0  243    6-281    52-300 (307)
235 2h8h_A Proto-oncogene tyrosine 100.0 2.1E-38 7.3E-43  336.0  16.1  227    8-284   291-522 (535)
236 3dzo_A Rhoptry kinase domain;  100.0 1.1E-38 3.7E-43  327.7  12.1  245    1-284    96-367 (413)
237 3m2w_A MAP kinase-activated pr 100.0   3E-38   1E-42  309.9  14.5  222    1-287    36-263 (299)
238 1byg_A CSK, protein (C-termina 100.0 5.9E-38   2E-42  304.1  15.8  222    6-280    42-266 (278)
239 3qa8_A MGC80376 protein; kinas 100.0 2.9E-38 9.8E-43  338.7  14.9  265    1-285    32-302 (676)
240 2w1i_A JAK2; chromosomal rearr 100.0 6.1E-38 2.1E-42  311.5  15.9  235    4-280    66-315 (326)
241 2eva_A TAK1 kinase - TAB1 chim 100.0 3.2E-37 1.1E-41  304.0  20.1  219    6-280    29-256 (307)
242 2vuw_A Serine/threonine-protei 100.0 2.4E-37 8.2E-42  308.5  16.6  243    2-285    39-336 (336)
243 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.6E-37 5.6E-42  313.4  15.0  222    3-280    90-331 (365)
244 2j0j_A Focal adhesion kinase 1 100.0 4.8E-37 1.6E-41  332.8  19.4  226    7-280   417-644 (656)
245 3mdy_A Bone morphogenetic prot 100.0 1.4E-36 4.9E-41  302.0  21.1  234    6-281    58-325 (337)
246 1b6c_B TGF-B superfamily recep 100.0 3.2E-36 1.1E-40  300.3  20.9  235    6-281    63-330 (342)
247 3g2f_A Bone morphogenetic prot 100.0 1.2E-36   4E-41  302.9  15.3  237    5-280    33-311 (336)
248 3uqc_A Probable conserved tran 100.0 9.2E-36 3.2E-40  290.9  14.9  208    1-280    49-258 (286)
249 3gxj_A TGF-beta receptor type- 100.0 3.5E-37 1.2E-41  301.6   4.5  233    6-280    24-290 (303)
250 2pzi_A Probable serine/threoni 100.0 1.7E-36 5.9E-41  330.4   8.4  224    2-284    99-324 (681)
251 4azs_A Methyltransferase WBDD; 100.0 7.1E-34 2.4E-38  302.8   4.3  173    2-197   253-435 (569)
252 3en9_A Glycoprotease, O-sialog  99.9 1.9E-24 6.6E-29  228.7   5.2  169    5-200   356-538 (540)
253 1zar_A RIO2 kinase; serine kin  99.8 2.5E-21 8.6E-26  188.2   7.5  127    2-172   109-252 (282)
254 1zth_A RIO1 serine protein kin  99.7 3.5E-18 1.2E-22  163.8   6.5  121    2-148    66-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.5 1.1E-14 3.7E-19  146.3   9.2   69   74-148   187-265 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.1 1.7E-10 5.8E-15  109.8  10.6  117    7-146    36-212 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.1 5.9E-10   2E-14  105.4  11.2  112    6-146    42-213 (264)
258 3dxp_A Putative acyl-COA dehyd  99.0 2.3E-09 7.8E-14  107.0  12.2  124    8-147    61-248 (359)
259 3sg8_A APH(2'')-ID; antibiotic  98.8 6.6E-09 2.3E-13  101.2   6.7  167    9-200    41-287 (304)
260 3r70_A Aminoglycoside phosphot  98.4 6.8E-07 2.3E-11   87.6   8.2  114    8-148    57-238 (320)
261 3tdw_A Gentamicin resistance p  98.3 4.4E-06 1.5E-10   81.3  11.6  118    8-147    39-224 (306)
262 4gkh_A Aminoglycoside 3'-phosp  98.1 1.2E-05   4E-10   76.3  10.0  115    7-147    49-223 (272)
263 3ovc_A Hygromycin-B 4-O-kinase  98.1   1E-05 3.5E-10   80.7   9.2   30  118-147   214-243 (362)
264 3ats_A Putative uncharacterize  98.0 9.6E-06 3.3E-10   80.4   7.3   31  117-147   222-252 (357)
265 3d1u_A Putative fructosamine-3  97.7 0.00017 5.8E-09   69.4  11.3   56    6-83     37-95  (288)
266 2q83_A YTAA protein; 2635576,   97.6 0.00015 5.1E-09   70.8   8.3   30  117-146   222-251 (346)
267 2yle_A Protein spire homolog 1  97.5 0.00028 9.5E-09   64.4   8.9   97   83-195    34-131 (229)
268 2olc_A MTR kinase, methylthior  97.5 0.00033 1.1E-08   70.3  10.2   30  116-146   226-255 (397)
269 3dxq_A Choline/ethanolamine ki  97.4 0.00042 1.4E-08   66.8   8.8   29  118-147   174-202 (301)
270 3c5i_A Choline kinase; choline  97.1  0.0012 4.1E-08   65.5   8.8   28  118-146   213-240 (369)
271 1nw1_A Choline kinase (49.2 KD  97.1  0.0014 4.8E-08   66.7   9.3   51    8-82    105-156 (429)
272 3feg_A Choline/ethanolamine ki  97.1   0.002 6.9E-08   64.3  10.3  116    8-146    82-253 (379)
273 2ppq_A HSK, HK, homoserine kin  97.0  0.0012 4.2E-08   63.9   7.8   30  117-146   187-216 (322)
274 3csv_A Aminoglycoside phosphot  96.9  0.0028 9.7E-08   61.8   9.3   31  117-147   183-217 (333)
275 3jr1_A Putative fructosamine-3  96.7  0.0074 2.5E-07   58.5  10.8   56    7-83     58-116 (312)
276 2qg7_A Ethanolamine kinase PV0  96.6   0.013 4.6E-07   59.9  11.9   52    8-82    133-185 (458)
277 3f7w_A Putative fructosamine-3  96.3   0.027 9.2E-07   53.5  11.3   56    5-82     36-94  (288)
278 3mes_A Choline kinase; malaria  96.2   0.013 4.5E-07   59.3   8.9   29  118-147   263-291 (424)
279 3f2s_A CK, chetk-alpha, cholin  96.1   0.011 3.6E-07   59.5   7.9   29  118-146   245-279 (401)
280 3g15_A CK, chetk-alpha, cholin  95.3   0.033 1.1E-06   55.9   7.9   29  119-147   246-280 (401)
281 2pyw_A Uncharacterized protein  95.3   0.012 4.2E-07   59.3   4.6   32  115-147   230-261 (420)
282 1zyl_A Hypothetical protein YI  93.8   0.047 1.6E-06   52.7   4.5   28  117-146   195-222 (328)
283 3i1a_A Spectinomycin phosphotr  92.2   0.085 2.9E-06   51.5   3.7   31  117-147   206-236 (339)
284 2z73_A Rhodopsin; visual pigme  92.2   0.026 8.9E-07   57.0   0.0    7  257-263   322-328 (448)
285 4ann_A ESSB; membrane protein,  79.3     3.8 0.00013   36.9   6.6   83   40-145    43-126 (215)
286 4ano_A ESSB; membrane protein,  76.3     4.4 0.00015   36.6   6.1   70   70-145    60-131 (219)
287 2x6h_A GH13170P, VPS34, phosph  63.2     9.1 0.00031   40.8   6.0   45   98-146   529-575 (696)
288 2y3a_A Phosphatidylinositol-4,  55.5      17 0.00057   40.8   6.6   42  103-146   923-964 (1092)
289 3ls8_A Phosphatidylinositol 3-  55.4      16 0.00054   38.3   6.1   46   97-146   454-501 (614)
290 1e7u_A Phosphatidylinositol 3-  53.0      17 0.00058   40.3   6.1   29  116-146   800-828 (961)
291 1zyl_A Hypothetical protein YI  51.9      55  0.0019   30.5   9.1   86    7-117    48-135 (328)
292 2wxf_A Phosphatidylinositol-4,  50.6      16 0.00053   40.5   5.3   41  102-146   770-812 (940)
293 3hhm_A Phosphatidylinositol-4,  42.8      28 0.00096   38.9   5.8   42  101-146   918-961 (1091)
294 3i1a_A Spectinomycin phosphotr  42.0      80  0.0027   29.9   8.5   82   10-118    48-132 (339)
295 2pk2_A Cyclin-T1, protein TAT;  40.0       6 0.00021   38.6   0.0    9  257-265   174-182 (358)
296 1cja_A Protein (actin-fragmin   27.5      61  0.0021   31.1   4.7   72   71-146   155-236 (342)
297 3eps_A Isocitrate dehydrogenas  25.5 1.9E+02  0.0065   29.6   8.0   54   95-148   429-482 (578)
298 3iot_A Maltose-binding protein  24.8      53  0.0018   32.4   4.0    8  273-280   355-362 (449)
299 3cxl_A N-chimerin; SH2, RHO-GA  24.6      10 0.00035   38.4  -1.4   45    9-53    165-215 (463)
300 3oja_A Leucine-rich immune mol  21.4     7.4 0.00025   39.5  -3.2   28   26-53    323-350 (487)

No 1  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=7.4e-57  Score=448.70  Aligned_cols=238  Identities=26%  Similarity=0.461  Sum_probs=205.3

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|+++.||+.||||+++.....  ....+.+|+++|++|+|||||+++++|++                ++.+|||||||
T Consensus        92 ~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~----------------~~~~~ivmEy~  153 (346)
T 4fih_A           92 IATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLV----------------GDELWVVMEFL  153 (346)
T ss_dssp             EEEETTTCCEEEEEEEEGGGCS--SGGGGHHHHHHHHHCCCTTBCCEEEEEEE----------------TTEEEEEECCC
T ss_pred             EEEECCCCCEEEEEEEecCchh--HHHHHHHHHHHHHhCCCCCCCcEEEEEEE----------------CCEEEEEEeCC
Confidence            4789999999999999865433  34567899999999999999999999987                66899999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR  159 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~  159 (472)
                      ++ +|.+++.+  .++++.+++.|++||+.||+|||++|||||||||+||||+.+++|||+|||+|+.+.... ......
T Consensus       154 ~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~~~~  230 (346)
T 4fih_A          154 EGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKSL  230 (346)
T ss_dssp             TTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CCBCCC
T ss_pred             CCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC-Cccccc
Confidence            96 56666654  369999999999999999999999999999999999999999999999999998765432 344567


Q ss_pred             cccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCc
Q 012062          160 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS  239 (472)
Q Consensus       160 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (472)
                      +||+.|||||++.+ ..|+.++||||||||||||++|+.||.+.+..+.+..|.+......                   
T Consensus       231 ~GTp~YmAPEvl~~-~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~-------------------  290 (346)
T 4fih_A          231 VGTPYWMAPELISR-LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL-------------------  290 (346)
T ss_dssp             CSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCC-------------------
T ss_pred             ccCcCcCCHHHHCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCC-------------------
Confidence            89999999999976 6789999999999999999999999999999988888865321110                   


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                              ..+..+++++++||.+||.+||++|+|++|||+|+||...
T Consensus       291 --------~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~  330 (346)
T 4fih_A          291 --------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA  330 (346)
T ss_dssp             --------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             --------CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCC
Confidence                    0123578899999999999999999999999999999764


No 2  
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=9.1e-57  Score=458.49  Aligned_cols=278  Identities=37%  Similarity=0.594  Sum_probs=227.0

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|+++.||+.||||+|+...........+++|+++|++|+|||||++++++.....          ....+++|||||||
T Consensus        72 ~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~----------~~~~~~~~ivmE~~  141 (398)
T 4b99_A           72 SARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVP----------YGEFKSVYVVLDLM  141 (398)
T ss_dssp             EEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSC----------TTTCCCEEEEEECC
T ss_pred             EEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccc----------cccCCEEEEEEeCC
Confidence            47899999999999998665444455678899999999999999999999976421          11256899999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccC---CCCccc
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYD---HNNTLT  157 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~---~~~~~~  157 (472)
                      +|+|.+++.+. ..+++.+++.|++||+.||+|||++|||||||||+||||+.++.+||+|||+|+.+...   ......
T Consensus       142 ~g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~  220 (398)
T 4b99_A          142 ESDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT  220 (398)
T ss_dssp             SEEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCC
T ss_pred             CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccc
Confidence            99988888764 47999999999999999999999999999999999999999999999999999876432   223455


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccC-
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF-  236 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-  236 (472)
                      +.+||+.|||||++.+...|+.++||||||||||||++|++||.+.+..+++..|++..+.+....|............ 
T Consensus       221 ~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~  300 (398)
T 4b99_A          221 EYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQ  300 (398)
T ss_dssp             SSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHH
T ss_pred             cceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhh
Confidence            6799999999999988677899999999999999999999999999999999999999999887776654332110000 


Q ss_pred             CCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCCCC
Q 012062          237 KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPL  289 (472)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~~~  289 (472)
                      .........+..++..++.+++|||.+||.+||++|+|++|+|+||||+....
T Consensus       301 ~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  353 (398)
T 4b99_A          301 SLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD  353 (398)
T ss_dssp             SSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCC
T ss_pred             cCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCC
Confidence            00001122355667788999999999999999999999999999999976433


No 3  
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=6.5e-57  Score=436.50  Aligned_cols=237  Identities=29%  Similarity=0.479  Sum_probs=195.1

Q ss_pred             CceeccCCCEEEEEEeecCCc-CCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|+++.||+.||||++++... .......+.+|+++|++|+|||||+++++|++                ++.+||||||
T Consensus        31 ~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~----------------~~~~~ivmEy   94 (275)
T 3hyh_A           31 LAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS----------------KDEIIMVIEY   94 (275)
T ss_dssp             EEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC----------------SSEEEEEEEC
T ss_pred             EEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE----------------CCEEEEEEeC
Confidence            478899999999999986643 33456678899999999999999999999987                6689999999


Q ss_pred             CCCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccc
Q 012062           80 MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR  159 (472)
Q Consensus        80 ~~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~  159 (472)
                      |+|+|.+++.+. ..+++.+++.|++||+.||+|||++||+||||||+||||+.++++||+|||+|+.....  ....+.
T Consensus        95 ~~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~--~~~~~~  171 (275)
T 3hyh_A           95 AGNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTS  171 (275)
T ss_dssp             CCEEHHHHHHHS-CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC--------------
T ss_pred             CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCC--CccCCe
Confidence            999998887664 46999999999999999999999999999999999999999999999999999865432  234457


Q ss_pred             cccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCc
Q 012062          160 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS  239 (472)
Q Consensus       160 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (472)
                      +||+.|||||++.+...++.++||||||||||+|++|+.||.+.+..+.+..+.+.....                    
T Consensus       172 ~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~--------------------  231 (275)
T 3hyh_A          172 CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL--------------------  231 (275)
T ss_dssp             ---CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC--------------------
T ss_pred             eECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC--------------------
Confidence            899999999999885556789999999999999999999999998888888776532211                    


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                +..+++++++||++||+.||++|+|++|+|+|+||+.
T Consensus       232 ----------p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          232 ----------PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             ----------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred             ----------CCCCCHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence                      1246788999999999999999999999999999964


No 4  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=3.5e-57  Score=451.71  Aligned_cols=239  Identities=24%  Similarity=0.439  Sum_probs=207.0

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|+++.||+.||||+|++..........+.+|+++|++|+|||||+++++|++                ++.+|||||||
T Consensus        42 ~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~----------------~~~~yiVmEy~  105 (350)
T 4b9d_A           42 LVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE----------------NGSLYIVMDYC  105 (350)
T ss_dssp             EEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE----------------TTEEEEEEECC
T ss_pred             EEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE----------------CCEEEEEEeCC
Confidence            47899999999999998775554456778999999999999999999999987                66899999999


Q ss_pred             CC-ChhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           81 DH-DLTGLADR-PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        81 ~g-~l~~~~~~-~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      +| +|.+++.. ....+++.+++.|++||+.||+|||++|||||||||+||||+.+++|||+|||+|+.+... ......
T Consensus       106 ~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~~~~~~  184 (350)
T 4b9d_A          106 EGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-VELARA  184 (350)
T ss_dssp             TTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-HHHHHH
T ss_pred             CCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCC-cccccc
Confidence            85 78777754 3446899999999999999999999999999999999999999999999999999865422 122345


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                      .+||+.|||||++.+ ..|+.++||||||||||||++|+.||.+.+..+++.++.+....+.                  
T Consensus       185 ~~GT~~YmAPE~l~~-~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~------------------  245 (350)
T 4b9d_A          185 CIGTPYYLSPEICEN-KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPV------------------  245 (350)
T ss_dssp             HHSCCTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC------------------
T ss_pred             cCCCccccCHHHHCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCC------------------
Confidence            689999999999987 6789999999999999999999999999999999988876432111                  


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                 +..++.++++||.+||++||++|||++|||+|+||..
T Consensus       246 -----------~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          246 -----------SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             -----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHT
T ss_pred             -----------CccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhc
Confidence                       1246789999999999999999999999999999954


No 5  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=1e-56  Score=441.31  Aligned_cols=238  Identities=26%  Similarity=0.432  Sum_probs=206.6

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|+++.|++.||||+|++.. ..+.....+.+|+++|++|+|||||+++++|++                ++.+||||||
T Consensus        50 ~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~----------------~~~~yivmEy  113 (311)
T 4aw0_A           50 LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD----------------DEKLYFGLSY  113 (311)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC----------------SSEEEEEECC
T ss_pred             EEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe----------------CCEEEEEEec
Confidence            58899999999999998653 233456678999999999999999999999987                6689999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCC-CCccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDH-NNTLT  157 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~-~~~~~  157 (472)
                      |+| +|.+++.+. ..+++.+++.|++||+.||+|||+++|+||||||+||||+.++++||+|||+|+.+.... .....
T Consensus       114 ~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~  192 (311)
T 4aw0_A          114 AKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN  192 (311)
T ss_dssp             CTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBC
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCccccc
Confidence            996 777777653 469999999999999999999999999999999999999999999999999999875433 23445


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCC
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK  237 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  237 (472)
                      +.+||+.|||||++.+ ..|+.++||||||||||+|++|+.||.+.+..+.+.+|.+.....+                 
T Consensus       193 ~~~GTp~YmAPEvl~~-~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p-----------------  254 (311)
T 4aw0_A          193 SFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP-----------------  254 (311)
T ss_dssp             CCCSCGGGCCHHHHHH-SCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC-----------------
T ss_pred             CcccCcccCCHHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC-----------------
Confidence            6789999999999987 6789999999999999999999999999999999988876432111                 


Q ss_pred             CchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHH------HhcCCCCCC
Q 012062          238 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD------ALDSEYFWT  286 (472)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~e------lL~h~~f~~  286 (472)
                                   ..+++++++||++||++||++|+|++|      |++||||..
T Consensus       255 -------------~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~  296 (311)
T 4aw0_A          255 -------------EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES  296 (311)
T ss_dssp             -------------TTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTT
T ss_pred             -------------cccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCC
Confidence                         246788999999999999999999988      589999954


No 6  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=8.7e-56  Score=451.58  Aligned_cols=238  Identities=26%  Similarity=0.461  Sum_probs=205.2

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|+++.||+.||||+++.....  ..+.+.+|+++|++|+|||||+++++|++                .+.+|||||||
T Consensus       169 ~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~----------------~~~~~iVmEy~  230 (423)
T 4fie_A          169 IATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLV----------------GDELWVVMEFL  230 (423)
T ss_dssp             EEEETTTCCEEEEEEEESTTCS--SGGGHHHHHHHHHHCCCTTBCCEEEEEEE----------------TTEEEEEEECC
T ss_pred             EEEECCCCCEEEEEEEeccchh--HHHHHHHHHHHHHhCCCCCCCceEEEEEE----------------CCEEEEEEeCC
Confidence            5889999999999999865433  35678899999999999999999999987                66899999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR  159 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~  159 (472)
                      +| +|.+++..  .++++.+++.|++||+.||+|||++|||||||||+||||+.+++|||+|||+|+.+... .......
T Consensus       231 ~gG~L~~~i~~--~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~-~~~~~~~  307 (423)
T 4fie_A          231 EGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKSL  307 (423)
T ss_dssp             TTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS-CCCBCCC
T ss_pred             CCCcHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCC-Ccccccc
Confidence            96 56666543  35999999999999999999999999999999999999999999999999999876543 2344567


Q ss_pred             cccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCc
Q 012062          160 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS  239 (472)
Q Consensus       160 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (472)
                      +||+.|||||++.+ ..|+.++||||||||||||++|+.||.+.+..+.+..|....... ..                 
T Consensus       308 ~GTp~YmAPEvl~~-~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~-~~-----------------  368 (423)
T 4fie_A          308 VGTPYWMAPELISR-LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR-LK-----------------  368 (423)
T ss_dssp             EECTTTCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC-CS-----------------
T ss_pred             ccCcCcCCHHHHCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCC-Cc-----------------
Confidence            89999999999976 679999999999999999999999999999999888886532111 00                 


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                               .+..+++++++||.+||.+||++|+|+.|||+|+||...
T Consensus       369 ---------~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~  407 (423)
T 4fie_A          369 ---------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA  407 (423)
T ss_dssp             ---------CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             ---------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCC
Confidence                     112478899999999999999999999999999999764


No 7  
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=4.2e-55  Score=429.53  Aligned_cols=233  Identities=24%  Similarity=0.398  Sum_probs=192.9

Q ss_pred             ccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-C
Q 012062            5 IKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-D   83 (472)
Q Consensus         5 ~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~   83 (472)
                      ..+++.||||++++..........+.+|+++|++|+|||||+++++|++                ++.+|||||||+| +
T Consensus        49 ~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~----------------~~~~~ivmEy~~gg~  112 (304)
T 3ubd_A           49 SDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT----------------EGKLYLILDFLRGGD  112 (304)
T ss_dssp             TTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE----------------TTEEEEEECCCTTCE
T ss_pred             CCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE----------------CCEEEEEEEcCCCCC
Confidence            4578999999998664333334567899999999999999999999987                6689999999996 6


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccccccC
Q 012062           84 LTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITL  163 (472)
Q Consensus        84 l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~  163 (472)
                      |.+++.+. ..+++.+++.|++||+.||+|||++||+||||||+||||+.++++||+|||+|+..... .....+.+||+
T Consensus       113 L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~~~~~~~~GT~  190 (304)
T 3ubd_A          113 LFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH-EKKAYSFCGTV  190 (304)
T ss_dssp             EHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC------CCCCSCCCCG
T ss_pred             HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC-CccccccccCc
Confidence            76766553 46999999999999999999999999999999999999999999999999999865432 23345578999


Q ss_pred             CCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhhh
Q 012062          164 WYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMK  243 (472)
Q Consensus       164 ~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (472)
                      .|||||++.+ ..|+.++||||||||||||++|+.||.+.+..+.+.+|.+.....                        
T Consensus       191 ~YmAPE~~~~-~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~------------------------  245 (304)
T 3ubd_A          191 EYMAPEVVNR-RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM------------------------  245 (304)
T ss_dssp             GGCCHHHHHT-SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC------------------------
T ss_pred             ccCCHHHhcc-CCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCC------------------------
Confidence            9999999987 678999999999999999999999999999999998887642211                        


Q ss_pred             hhHHHHhhhccHHHHHHHHHhhccCCCCCCC-----HHHHhcCCCCCC
Q 012062          244 RRVREVFRHFDRHALELLEKMLMLDPSQRIS-----AKDALDSEYFWT  286 (472)
Q Consensus       244 ~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t-----~~elL~h~~f~~  286 (472)
                            +..+++++++||++||++||++|+|     ++||++|+||..
T Consensus       246 ------p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~  287 (304)
T 3ubd_A          246 ------PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFST  287 (304)
T ss_dssp             ------CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTT
T ss_pred             ------CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccC
Confidence                  1246789999999999999999998     589999999954


No 8  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=1.8e-54  Score=422.86  Aligned_cols=241  Identities=22%  Similarity=0.303  Sum_probs=196.1

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|+++.|++.||||++............+.+|+++|++|+|||||+++++|++..            ..+..+|||||||
T Consensus        44 ~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~------------~~~~~~~lvmEy~  111 (290)
T 3fpq_A           44 KGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV------------KGKKCIVLVTELM  111 (290)
T ss_dssp             EEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE------------TTEEEEEEEEECC
T ss_pred             EEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc------------CCCcEEEEEEeCC
Confidence            4788999999999999866544445567889999999999999999999997521            1145689999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEEcC-CCCeEEeeccceeeeccCCCCcc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ--VLHRDIKGSNLLIDN-EGNLKLADFGLARSFSYDHNNTL  156 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~g--iiHrDLKp~NILl~~-~~~vkL~DFG~a~~~~~~~~~~~  156 (472)
                      ++ +|.+++.+ ...+++.+++.|++||+.||+|||+++  ||||||||+||||+. ++++||+|||+|+...   ....
T Consensus       112 ~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~---~~~~  187 (290)
T 3fpq_A          112 TSGTLKTYLKR-FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR---ASFA  187 (290)
T ss_dssp             CSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC---TTSB
T ss_pred             CCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC---CCcc
Confidence            96 66666654 346999999999999999999999998  999999999999985 7899999999997543   2334


Q ss_pred             ccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccC
Q 012062          157 TNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF  236 (472)
Q Consensus       157 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  236 (472)
                      ...+||+.|||||++.+  .|+.++||||||||||||++|+.||.+.+....+.+.+.....+                 
T Consensus       188 ~~~~GTp~YmAPE~~~~--~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~-----------------  248 (290)
T 3fpq_A          188 KAVIGTPEFMAPEMYEE--KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP-----------------  248 (290)
T ss_dssp             EESCSSCCCCCGGGGGT--CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC-----------------
T ss_pred             CCcccCccccCHHHcCC--CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCC-----------------
Confidence            55789999999998865  58999999999999999999999998776655544443211100                 


Q ss_pred             CCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          237 KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                ..+...+++++++||.+||..||++|||++|+|+||||+.
T Consensus       249 ----------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          249 ----------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             ----------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             ----------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence                      0112346678999999999999999999999999999964


No 9  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=4.9e-54  Score=427.06  Aligned_cols=234  Identities=24%  Similarity=0.310  Sum_probs=195.1

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|+++.||+.||||+++.+..       ..+|+.+|++|+|||||+++++|++                .+.+|||||||
T Consensus        76 ~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~----------------~~~~~ivmEy~  132 (336)
T 4g3f_A           76 RMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVRE----------------GPWVNIFMELL  132 (336)
T ss_dssp             EEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEE----------------TTEEEEEECCC
T ss_pred             EEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEE----------------CCEEEEEEecc
Confidence            478999999999999986432       2479999999999999999999987                66899999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCC-CeEEeeccceeeeccCCCC----
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG-NLKLADFGLARSFSYDHNN----  154 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~-~vkL~DFG~a~~~~~~~~~----  154 (472)
                      +| +|.+++.+. ..+++.+++.|+.||+.||+|||+++||||||||+||||+.++ ++||+|||+|+.+......    
T Consensus       133 ~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~  211 (336)
T 4g3f_A          133 EGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL  211 (336)
T ss_dssp             TTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccccee
Confidence            96 677776543 4699999999999999999999999999999999999999987 5999999999876543221    


Q ss_pred             ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccc
Q 012062          155 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYN  234 (472)
Q Consensus       155 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  234 (472)
                      .....+||+.|||||++.+ ..|+.++||||||||||||++|+.||.+.+..+.+.+|.....                 
T Consensus       212 ~~~~~~GT~~YmAPE~~~~-~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~-----------------  273 (336)
T 4g3f_A          212 TGDYIPGTETHMAPEVVMG-KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPP-----------------  273 (336)
T ss_dssp             --CCCCCCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCC-----------------
T ss_pred             cCCccccCccccCHHHHCC-CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCC-----------------
Confidence            2234579999999999987 6799999999999999999999999999887777777755211                 


Q ss_pred             cCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHH-------------hcCCCCCC
Q 012062          235 HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDA-------------LDSEYFWT  286 (472)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~el-------------L~h~~f~~  286 (472)
                                ....++..+++++++||.+||.+||++|||+.||             |+|||+..
T Consensus       274 ----------~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~  328 (336)
T 4g3f_A          274 ----------PIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGE  328 (336)
T ss_dssp             ----------GGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSS
T ss_pred             ----------CchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCC
Confidence                      0112234678899999999999999999999997             57999854


No 10 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=5.5e-52  Score=418.51  Aligned_cols=257  Identities=26%  Similarity=0.437  Sum_probs=195.6

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-C
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-D   83 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~   83 (472)
                      .+++.||||++....    ...++.+|+++|+.+ +|||||+++++|++                ++++|||||||++ +
T Consensus        47 ~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~----------------~~~~~lvmE~~~g~~  106 (361)
T 4f9c_A           47 GPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFRK----------------NDHVVIAMPYLEHES  106 (361)
T ss_dssp             SCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE----------------TTEEEEEEECCCCCC
T ss_pred             CCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEEEE----------------CCEEEEEEeCCCccc
Confidence            578899999986542    345678999999998 69999999999987                6689999999985 6


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCC-CCeEEeeccceeeeccCC----------
Q 012062           84 LTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE-GNLKLADFGLARSFSYDH----------  152 (472)
Q Consensus        84 l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~-~~vkL~DFG~a~~~~~~~----------  152 (472)
                      |.+++.    .+++.+++.|++||+.||+|||++||+||||||+||||+.+ +.+||+|||+|+......          
T Consensus       107 L~~~~~----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~  182 (361)
T 4f9c_A          107 FLDILN----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSE  182 (361)
T ss_dssp             HHHHHT----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC---
T ss_pred             HHHHHc----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccccccccccc
Confidence            777663    48999999999999999999999999999999999999876 789999999998654321          


Q ss_pred             -----------------CCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCC-CCCChHHHHHHHHH
Q 012062          153 -----------------NNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPIL-PGKNEAEQLSKIFE  214 (472)
Q Consensus       153 -----------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf-~~~~~~~~~~~i~~  214 (472)
                                       ....+..+||+.|||||++.+...|+.++||||||||+|+|++|+.|| .+.++.+++..|+.
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~  262 (361)
T 4f9c_A          183 AQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMT  262 (361)
T ss_dssp             -----------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Confidence                             112345689999999999988667999999999999999999999887 56678888998888


Q ss_pred             hcCCCCCCCCccCC--------CCCcc------------cc----CCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCC
Q 012062          215 LCGSPDETIWPGVS--------KMPAY------------NH----FKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPS  270 (472)
Q Consensus       215 ~~~~~~~~~~~~~~--------~~~~~------------~~----~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~  270 (472)
                      .++.+....+....        ..+..            ..    +.............+..++++++|||++||+.||+
T Consensus       263 ~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~  342 (361)
T 4f9c_A          263 IRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPA  342 (361)
T ss_dssp             HHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTT
T ss_pred             hcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChh
Confidence            76643211111000        00000            00    00000001112234567899999999999999999


Q ss_pred             CCCCHHHHhcCCCCCC
Q 012062          271 QRISAKDALDSEYFWT  286 (472)
Q Consensus       271 ~R~t~~elL~h~~f~~  286 (472)
                      +|+|++|+|+||||+.
T Consensus       343 ~R~ta~eaL~Hp~f~~  358 (361)
T 4f9c_A          343 SRITAEEALLHPFFKD  358 (361)
T ss_dssp             TSCCHHHHHTSGGGTT
T ss_pred             HCcCHHHHhcCcccCC
Confidence            9999999999999954


No 11 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=6.6e-51  Score=434.23  Aligned_cols=244  Identities=25%  Similarity=0.400  Sum_probs=210.6

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|+++.||+.||||+++.....  ....+.+|+++|+.|+|||||+++++|++                .+.+|||||||
T Consensus       175 ~~~~~~tg~~~AiK~i~~~~~~--~~~~~~~Ei~il~~l~hpnIv~l~~~~~~----------------~~~~~iv~E~~  236 (573)
T 3uto_A          175 RVTERATGNNFAAKFVMTPHES--DKETVRKEIQTMSVLRHPTLVNLHDAFED----------------DNEMVMIYEFM  236 (573)
T ss_dssp             EEEETTTCCEEEEEEEECCSHH--HHHHHHHHHHHHHHTCCTTBCCEEEEEEC----------------SSEEEEEEECC
T ss_pred             EEEECCCCCEEEEEEEeccchh--hHHHHHHHHHHHHhCCCCCCCeEEEEEEE----------------CCEEEEEEeec
Confidence            4789999999999999865432  24567899999999999999999999987                67899999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCC--CCeEEeeccceeeeccCCCCccc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE--GNLKLADFGLARSFSYDHNNTLT  157 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~--~~vkL~DFG~a~~~~~~~~~~~~  157 (472)
                      +| +|.+++.+....|++.+++.|++||+.||+|||+++|+||||||+||||+.+  +.+||+|||+|+.+...  ....
T Consensus       237 ~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~--~~~~  314 (573)
T 3uto_A          237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK--QSVK  314 (573)
T ss_dssp             CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--SEEE
T ss_pred             CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC--Ccee
Confidence            85 7878777666679999999999999999999999999999999999999864  78999999999877532  3345


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCC
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK  237 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  237 (472)
                      ..+||+.|||||++.+ ..|+.++||||||||||+|++|+.||.+.+..+.+..|......+....              
T Consensus       315 ~~~GT~~y~APEv~~~-~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~--------------  379 (573)
T 3uto_A          315 VTTGTAEFAAPEVAEG-KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSA--------------  379 (573)
T ss_dssp             EECSSGGGCCHHHHTT-CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGG--------------
T ss_pred             eeEECccccCHHHhCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCccc--------------
Confidence            5689999999999987 6789999999999999999999999999999999998876544333222              


Q ss_pred             CchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCCCCCC
Q 012062          238 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPC  291 (472)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~~~~~  291 (472)
                                  +..+++++++||++||..||++|+|+.|+|+|+||+....+.
T Consensus       380 ------------~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~~  421 (573)
T 3uto_A          380 ------------FSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPG  421 (573)
T ss_dssp             ------------GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCTT
T ss_pred             ------------ccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCCCC
Confidence                        235788999999999999999999999999999997654443


No 12 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=5.1e-51  Score=401.07  Aligned_cols=249  Identities=22%  Similarity=0.315  Sum_probs=182.1

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|+++.||+.||||+++.... +.....+.+|+++|++|+|||||+++++|.+.+....    ......+.++|||||||
T Consensus        23 ~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~----~~~~~~~~~l~ivmE~~   97 (299)
T 4g31_A           23 EAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEK----LQPSSPKVYLYIQMQLC   97 (299)
T ss_dssp             EEEETTTCCEEEEEEEEECSS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------------CEEEEEEEECC
T ss_pred             EEEECCCCCEEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccc----ccccCCCcEEEEEEecC
Confidence            478999999999999986542 2244678899999999999999999999986432100    00111244689999999


Q ss_pred             CC-ChhhhhcCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC----
Q 012062           81 DH-DLTGLADRPGL--RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN----  153 (472)
Q Consensus        81 ~g-~l~~~~~~~~~--~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~----  153 (472)
                      ++ +|.+++.....  ......++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+|+.+.....    
T Consensus        98 ~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~  177 (299)
T 4g31_A           98 RKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV  177 (299)
T ss_dssp             CSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC------------
T ss_pred             CCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCcccccc
Confidence            85 67776655321  245667899999999999999999999999999999999999999999999987654322    


Q ss_pred             -------CccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCcc
Q 012062          154 -------NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPG  226 (472)
Q Consensus       154 -------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  226 (472)
                             ...+..+||+.|||||++.+ ..|+.++||||||||||||++   ||.+..  +....+.......       
T Consensus       178 ~~~~~~~~~~~~~~GT~~YmAPE~~~~-~~y~~~~DiwSlGvilyell~---Pf~~~~--~~~~~~~~~~~~~-------  244 (299)
T 4g31_A          178 LTPMPAYARHTGQVGTKLYMSPEQIHG-NSYSHKVDIFSLGLILFELLY---PFSTQM--ERVRTLTDVRNLK-------  244 (299)
T ss_dssp             --------------CCCTTSCHHHHTT-CCCCTHHHHHHHHHHHHHHHS---CCSSHH--HHHHHHHHHHTTC-------
T ss_pred             ccccccccccCCcccCccccCHHHHcC-CCCCCHHHHHHHHHHHHHHcc---CCCCcc--HHHHHHHHHhcCC-------
Confidence                   12344689999999999987 679999999999999999996   675432  3333222221100       


Q ss_pred             CCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          227 VSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                         ....+...++.+++||++||+.||++|||+.|||+|+||..
T Consensus       245 -------------------~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~  285 (299)
T 4g31_A          245 -------------------FPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFED  285 (299)
T ss_dssp             -------------------CCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCC
T ss_pred             -------------------CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCC
Confidence                               01223345667889999999999999999999999999964


No 13 
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=1.1e-49  Score=391.95  Aligned_cols=232  Identities=18%  Similarity=0.273  Sum_probs=185.1

Q ss_pred             CCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Chhh
Q 012062            8 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTG   86 (472)
Q Consensus         8 g~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l~~   86 (472)
                      ...||||+++.........+.+.+|+++|++|+|||||++++++..                 +.+|||||||++ +|.+
T Consensus        58 ~~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-----------------~~~~iVmEy~~gGsL~~  120 (307)
T 3omv_A           58 HGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-----------------DNLAIVTQWCEGSSLYK  120 (307)
T ss_dssp             SSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----------------SSCEEEEECCSSCBHHH
T ss_pred             CCcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-----------------CeEEEEEEcCCCCCHHH
Confidence            3469999998665444456678899999999999999999998853                 357999999995 7778


Q ss_pred             hhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCC-CCccccccccCCC
Q 012062           87 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDH-NNTLTNRVITLWY  165 (472)
Q Consensus        87 ~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~-~~~~~~~~gt~~y  165 (472)
                      ++......+++.++..|+.||+.||+|||+++||||||||+||||+.++++||+|||+|+...... .......+||+.|
T Consensus       121 ~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~y  200 (307)
T 3omv_A          121 HLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLW  200 (307)
T ss_dssp             HHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTS
T ss_pred             HHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCc
Confidence            777666689999999999999999999999999999999999999999999999999998654322 2334556899999


Q ss_pred             CChhhhcCC--CCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhhh
Q 012062          166 RPPELLLGA--TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMK  243 (472)
Q Consensus       166 ~aPE~l~~~--~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (472)
                      ||||++.+.  ..|+.++||||||||||||+||+.||.+.+....+..++......+.     .                
T Consensus       201 mAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~-----~----------------  259 (307)
T 3omv_A          201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPD-----L----------------  259 (307)
T ss_dssp             CCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCC-----S----------------
T ss_pred             cCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCC-----c----------------
Confidence            999999752  35899999999999999999999999988776666655543221111     0                


Q ss_pred             hhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          244 RRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       244 ~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                         ...+..+++++.+||.+||+.||++|||+.||++
T Consensus       260 ---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~  293 (307)
T 3omv_A          260 ---SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILS  293 (307)
T ss_dssp             ---TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred             ---ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence               0112346788999999999999999999998864


No 14 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=6.3e-49  Score=388.56  Aligned_cols=267  Identities=45%  Similarity=0.844  Sum_probs=224.2

Q ss_pred             ceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCC
Q 012062            2 AREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD   81 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~   81 (472)
                      |++ .+++.||||+++...........+.+|+++|++++|+||+++++++.+                .+.+||||||++
T Consensus        40 ~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----------------~~~~~lv~e~~~  102 (311)
T 3niz_A           40 AKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS----------------ERCLTLVFEFME  102 (311)
T ss_dssp             EEE-TTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECC----------------SSCEEEEEECCS
T ss_pred             EEE-CCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEcc----------------CCEEEEEEcCCC
Confidence            555 369999999998776555566788899999999999999999999976                567999999999


Q ss_pred             CChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccccc
Q 012062           82 HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI  161 (472)
Q Consensus        82 g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g  161 (472)
                      ++|.+.+......+++.+++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+++.+... .......++
T Consensus       103 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~  181 (311)
T 3niz_A          103 KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP-VRSYTHEVV  181 (311)
T ss_dssp             EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC-CC---CCCC
T ss_pred             CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCC-cccccCCcc
Confidence            9999888877777999999999999999999999999999999999999999999999999999876432 223344578


Q ss_pred             cCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchh
Q 012062          162 TLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRT  241 (472)
Q Consensus       162 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (472)
                      |+.|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+.+..++...+.+....|+....++.+........
T Consensus       182 t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (311)
T 3niz_A          182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVF  261 (311)
T ss_dssp             CCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCC
T ss_pred             cCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccc
Confidence            99999999998766789999999999999999999999999999999999999999998888887766544332222222


Q ss_pred             hhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          242 MKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      ...........++.++++||++||..||++|||++|+|+|+||+.
T Consensus       262 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  306 (311)
T 3niz_A          262 EKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD  306 (311)
T ss_dssp             CCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             cCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCccccc
Confidence            234455667788999999999999999999999999999999954


No 15 
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=6.3e-49  Score=390.94  Aligned_cols=229  Identities=24%  Similarity=0.352  Sum_probs=182.4

Q ss_pred             eccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-
Q 012062            4 EIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-   82 (472)
Q Consensus         4 ~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-   82 (472)
                      +..+++.||||+++...  ....+.+.+|+++|++|+|||||++++++.+                .+.+|||||||++ 
T Consensus        67 ~~~~~~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~----------------~~~~~lV~Ey~~~G  128 (329)
T 4aoj_A           67 PEQDKMLVAVKALKEAS--ESARQDFQREAELLTMLQHQHIVRFFGVCTE----------------GRPLLMVFEYMRHG  128 (329)
T ss_dssp             C---CEEEEEEEESCCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECS----------------SSSEEEEEECCTTC
T ss_pred             cCCCCeEEEEEEECcCC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE----------------CCEEEEEEEcCCCC
Confidence            34678999999997543  2235678899999999999999999999986                5578999999995 


Q ss_pred             ChhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeee
Q 012062           83 DLTGLADRP--------------GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF  148 (472)
Q Consensus        83 ~l~~~~~~~--------------~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~  148 (472)
                      +|.+++.+.              ...+++.++..|+.||+.||+|||+++||||||||+||||+.++++||+|||+|+.+
T Consensus       129 ~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~  208 (329)
T 4aoj_A          129 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI  208 (329)
T ss_dssp             BHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred             cHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceec
Confidence            777766542              235899999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCC-CccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCcc
Q 012062          149 SYDHN-NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPG  226 (472)
Q Consensus       149 ~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  226 (472)
                      ..... ...+..++|+.|||||++.+ ..|+.++||||||||||||+| |+.||.+.+..+.+..+.+......      
T Consensus       209 ~~~~~~~~~~~~~gt~~ymAPE~~~~-~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~------  281 (329)
T 4aoj_A          209 YSTDYYRVGGRTMLPIRWMPPESILY-RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELER------  281 (329)
T ss_dssp             -----------CCCCGGGCCHHHHTT-CCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCCC------
T ss_pred             cCCCcceecCcccccccccChhhhcC-CCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCC------
Confidence            44322 23344678999999999986 678999999999999999998 8999999999888887765321110      


Q ss_pred             CCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          227 VSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                             ...+++++.+||.+||+.||++|||+.||++
T Consensus       282 -----------------------p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~  312 (329)
T 4aoj_A          282 -----------------------PRACPPEVYAIMRGCWQREPQQRHSIKDVHA  312 (329)
T ss_dssp             -----------------------CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHH
T ss_pred             -----------------------cccccHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence                                   1246778999999999999999999999975


No 16 
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=2.8e-49  Score=388.32  Aligned_cols=228  Identities=24%  Similarity=0.360  Sum_probs=189.0

Q ss_pred             ccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-C
Q 012062            5 IKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-D   83 (472)
Q Consensus         5 ~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~   83 (472)
                      ..+++.||||+++...  ....+.+.+|+++|++|+|||||++++++.+                .+.+|||||||++ +
T Consensus        40 ~~~~~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~----------------~~~~~lV~Ey~~~G~  101 (299)
T 4asz_A           40 EQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQHEHIVKFYGVCVE----------------GDPLIMVFEYMKHGD  101 (299)
T ss_dssp             ---CEEEEEEEECSCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECS----------------SSSEEEEEECCTTCB
T ss_pred             CCCCEEEEEEEeCCCC--hHHHHHHHHHHHHHHhCCCCCCccEEEEEee----------------CCEEEEEEEcCCCCc
Confidence            3578899999997543  2235678899999999999999999999986                5578999999985 7


Q ss_pred             hhhhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccC
Q 012062           84 LTGLADRP------------GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYD  151 (472)
Q Consensus        84 l~~~~~~~------------~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~  151 (472)
                      |.+++.+.            ...+++.+++.|+.||+.||+|||+++||||||||+||||+.++++||+|||+|+.....
T Consensus       102 L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~  181 (299)
T 4asz_A          102 LNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYST  181 (299)
T ss_dssp             HHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGG
T ss_pred             HHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCC
Confidence            77776532            346999999999999999999999999999999999999999999999999999865433


Q ss_pred             CCC-ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCC
Q 012062          152 HNN-TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK  229 (472)
Q Consensus       152 ~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  229 (472)
                      ... .....++|+.|||||++.+ ..|+.++||||||||||||+| |+.||.+.+..+.+..+.+....+.         
T Consensus       182 ~~~~~~~~~~gt~~ymAPE~~~~-~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~---------  251 (299)
T 4asz_A          182 DYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQR---------  251 (299)
T ss_dssp             GCEEETTTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCC---------
T ss_pred             CceeecCceecChhhcCHHHHcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCC---------
Confidence            222 2233468999999999987 679999999999999999998 8999999999888888765321110         


Q ss_pred             CCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          230 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                          +..+++++.+||.+||+.||++|||++||++
T Consensus       252 --------------------p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~  282 (299)
T 4asz_A          252 --------------------PRTCPQEVYELMLGCWQREPHMRKNIKGIHT  282 (299)
T ss_dssp             --------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------------------CccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                                1246778999999999999999999999853


No 17 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=5e-49  Score=419.49  Aligned_cols=236  Identities=22%  Similarity=0.360  Sum_probs=192.1

Q ss_pred             CceeccCCCEEEEEEeecCCc-CCCchhhHHH---HHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEE
Q 012062            1 MAREIKTGEIVALKKIRMDNE-KEGFPITAIR---EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMV   76 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~-~~~~~~~~~~---Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iV   76 (472)
                      +|+++.||+.||||+|++... .......+.+   ++.+++.++|||||+++++|++                .+.+|||
T Consensus       207 la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~----------------~~~lylV  270 (689)
T 3v5w_A          207 GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT----------------PDKLSFI  270 (689)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC----------------SSEEEEE
T ss_pred             EEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE----------------CCEEEEE
Confidence            588999999999999976531 1222233334   4666777899999999999997                6689999


Q ss_pred             EecCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCc
Q 012062           77 FEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNT  155 (472)
Q Consensus        77 mEy~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~  155 (472)
                      ||||.| +|..++.+. ..|++..++.|++||+.||+|||++|||||||||+||||+.+|+|||+|||+|+.+...   .
T Consensus       271 mEy~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~---~  346 (689)
T 3v5w_A          271 LDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---K  346 (689)
T ss_dssp             ECCCCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC---C
T ss_pred             EecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCC---C
Confidence            999996 677766553 46999999999999999999999999999999999999999999999999999876533   2


Q ss_pred             cccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHhcCCCCCCCCccCCCCCc
Q 012062          156 LTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNE---AEQLSKIFELCGSPDETIWPGVSKMPA  232 (472)
Q Consensus       156 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~  232 (472)
                      ..+.+||+.|||||++.+...|+.++||||||||||||++|+.||.+.+.   .+....+......              
T Consensus       347 ~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~--------------  412 (689)
T 3v5w_A          347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE--------------  412 (689)
T ss_dssp             CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCC--------------
T ss_pred             CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC--------------
Confidence            34568999999999997556799999999999999999999999986533   2333333321110              


Q ss_pred             cccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCC-----HHHHhcCCCCCC
Q 012062          233 YNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRIS-----AKDALDSEYFWT  286 (472)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t-----~~elL~h~~f~~  286 (472)
                                      ++..++.++++||.+||.+||++|++     ++||++|+||..
T Consensus       413 ----------------~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~  455 (689)
T 3v5w_A          413 ----------------LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS  455 (689)
T ss_dssp             ----------------CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTT
T ss_pred             ----------------CCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccC
Confidence                            11247889999999999999999998     799999999953


No 18 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=2.9e-48  Score=379.68  Aligned_cols=268  Identities=42%  Similarity=0.785  Sum_probs=228.6

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++...........+.+|++++++++|+||+++++++.+                .+.+||||||+
T Consensus        20 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----------------~~~~~lv~e~~   83 (292)
T 3o0g_A           20 KAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS----------------DKKLTLVFEFC   83 (292)
T ss_dssp             EEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE----------------TTEEEEEEECC
T ss_pred             EEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe----------------CCEEEEEEecC
Confidence            47889999999999998776666666788899999999999999999999987                56899999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccccc
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV  160 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~  160 (472)
                      +++++..+......+++.+++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+++.+... .......+
T Consensus        84 ~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~  162 (292)
T 3o0g_A           84 DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP-VRCYSAEV  162 (292)
T ss_dssp             SEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC-CSCCCSCC
T ss_pred             CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc-cccccCCc
Confidence            99998888776678999999999999999999999999999999999999999999999999999876532 23334557


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCC-CCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCc
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPI-LPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS  239 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~p-f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (472)
                      +|..|+|||++.+...++.++|||||||++|+|++|..| |.+.+..+.+..+++..+.+....|+.....+.+......
T Consensus       163 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (292)
T 3o0g_A          163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY  242 (292)
T ss_dssp             SCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCC
T ss_pred             cccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccc
Confidence            899999999998766689999999999999999987655 7888889999999999999999888887776655433221


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      . ...........++.++++||++||+.||++|||++|+|+|+||..
T Consensus       243 ~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  288 (292)
T 3o0g_A          243 P-ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             C-TTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             c-CCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCccccc
Confidence            1 122233344568899999999999999999999999999999954


No 19 
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=1.2e-47  Score=385.17  Aligned_cols=284  Identities=51%  Similarity=0.924  Sum_probs=233.2

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||++............+.+|+++|+.++|+||+++++++......        .....+.+||||||+
T Consensus        35 ~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--------~~~~~~~~~lv~e~~  106 (351)
T 3mi9_A           35 KARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP--------YNRCKGSIYLVFDFC  106 (351)
T ss_dssp             EEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC----------------CEEEEEEECC
T ss_pred             EEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccc--------cccCCceEEEEEecc
Confidence            478889999999999987766666677888999999999999999999999874321        111256799999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCC---CCccc
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDH---NNTLT  157 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~---~~~~~  157 (472)
                      +++|...+......+++.+++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+++.+....   .....
T Consensus       107 ~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  186 (351)
T 3mi9_A          107 EHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYT  186 (351)
T ss_dssp             SEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCC
T ss_pred             CCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccC
Confidence            999988888776779999999999999999999999999999999999999999999999999998765322   22334


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCC
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK  237 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  237 (472)
                      ..++|+.|+|||++.+...++.++||||||||+|+|++|+.||.+.+..+.+..+...++......|+.......+....
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  266 (351)
T 3mi9_A          187 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLE  266 (351)
T ss_dssp             SSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSC
T ss_pred             CcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccc
Confidence            56789999999999876678999999999999999999999999999999999999999999888888776554444333


Q ss_pred             CchhhhhhHHHHhh--hccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCCCCCCC
Q 012062          238 PSRTMKRRVREVFR--HFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCD  292 (472)
Q Consensus       238 ~~~~~~~~~~~~~~--~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~~~~~~  292 (472)
                      ..............  ..+..+++||.+||..||++|+|++|+|+|+||+.++.+..
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~  323 (351)
T 3mi9_A          267 LVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSD  323 (351)
T ss_dssp             CCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSCCCC
T ss_pred             cccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCCccc
Confidence            32222222222222  24788999999999999999999999999999988766543


No 20 
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=2.3e-48  Score=383.45  Aligned_cols=231  Identities=23%  Similarity=0.326  Sum_probs=189.9

Q ss_pred             eccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-
Q 012062            4 EIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-   82 (472)
Q Consensus         4 ~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-   82 (472)
                      +..+++.||||+++.... ....+.+.+|+.+|++|+|||||++++++..                .+.+|||||||++ 
T Consensus        52 ~~~~~~~VAvK~l~~~~~-~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~----------------~~~~~lV~Ey~~~G  114 (308)
T 4gt4_A           52 PGEQTQAVAIKTLKDKAE-GPLREEFRHEAMLRARLQHPNVVCLLGVVTK----------------DQPLSMIFSYCSHG  114 (308)
T ss_dssp             ----CEEEEEEECCC-CC-C-CHHHHHHHHHHHHHCCCTTBCCEEEEECS----------------SSSCEEEEECCSSC
T ss_pred             cCCCCeEEEEEEECcccC-hHHHHHHHHHHHHHHhCCCCCCCCcceEEEE----------------CCEEEEEEEcCCCC
Confidence            346788999999975433 3345678999999999999999999999986                4568999999985 


Q ss_pred             ChhhhhcCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceee
Q 012062           83 DLTGLADRP---------------GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS  147 (472)
Q Consensus        83 ~l~~~~~~~---------------~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~  147 (472)
                      +|.+++...               ...+++.++..|+.||+.||+|||+++||||||||+||||++++++||+|||+|+.
T Consensus       115 ~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~  194 (308)
T 4gt4_A          115 DLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE  194 (308)
T ss_dssp             BHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCG
T ss_pred             cHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCccccee
Confidence            777776432               23589999999999999999999999999999999999999999999999999986


Q ss_pred             eccCC-CCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCc
Q 012062          148 FSYDH-NNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWP  225 (472)
Q Consensus       148 ~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  225 (472)
                      ..... ....+..++|+.|||||++.+ ..|+.++||||||||||||+| |..||.+.+..+.+..+.+....+.     
T Consensus       195 ~~~~~~~~~~~~~~gt~~ymAPE~l~~-~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~-----  268 (308)
T 4gt4_A          195 VYAADYYKLLGNSLLPIRWMAPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC-----  268 (308)
T ss_dssp             GGGGGCBCSSSSSCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCC-----
T ss_pred             ccCCCceeEecccccCCcccCHHHHhC-CCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-----
Confidence            64332 233445678999999999987 679999999999999999998 8999999998888877754321110     


Q ss_pred             cCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          226 GVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                              ...++..+.+||.+||+.||++|||+.||+++
T Consensus       269 ------------------------p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          269 ------------------------PDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             ------------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------------------cccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                                    12467789999999999999999999999864


No 21 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=7.5e-48  Score=376.14  Aligned_cols=266  Identities=45%  Similarity=0.837  Sum_probs=220.5

Q ss_pred             ceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCC
Q 012062            2 AREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD   81 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~   81 (472)
                      |++ .+++.||||+++...........+.+|++++++++||||+++++++..                .+.+||||||++
T Consensus        21 ~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----------------~~~~~lv~e~~~   83 (288)
T 1ob3_A           21 AQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT----------------KKRLVLVFEHLD   83 (288)
T ss_dssp             EEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC----------------SSCEEEEEECCS
T ss_pred             EEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc----------------CCeEEEEEEecC
Confidence            566 689999999998766555556778899999999999999999999986                557999999999


Q ss_pred             CChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccccc
Q 012062           82 HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI  161 (472)
Q Consensus        82 g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g  161 (472)
                      ++|.+++......+++.+++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++.+.... ......++
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~  162 (288)
T 1ob3_A           84 QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV-RKYTHEIV  162 (288)
T ss_dssp             EEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----------C
T ss_pred             CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc-cccccccc
Confidence            99988888766679999999999999999999999999999999999999999999999999997654322 22344577


Q ss_pred             cCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchh
Q 012062          162 TLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRT  241 (472)
Q Consensus       162 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (472)
                      |+.|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+.+..+++..+.+....|+.....+.+....... 
T Consensus       163 t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  241 (288)
T 1ob3_A          163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY-  241 (288)
T ss_dssp             CCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCC-
T ss_pred             cccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccc-
Confidence            9999999999875668999999999999999999999999999999999999999988888888766554432211110 


Q ss_pred             hhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          242 MKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      ...........++.++++||++||..||++|||++|+|+|+||..
T Consensus       242 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          242 EPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (288)
T ss_dssp             CCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             cCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence            011223344568899999999999999999999999999999954


No 22 
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=8.9e-48  Score=383.19  Aligned_cols=269  Identities=44%  Similarity=0.803  Sum_probs=217.0

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++...........+.+|+++|++++|+||+++++++..                ...+||||||+
T Consensus        52 ~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----------------~~~~~lv~e~~  115 (329)
T 3gbz_A           52 KAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH----------------NHRLHLIFEYA  115 (329)
T ss_dssp             EEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE----------------TTEEEEEEECC
T ss_pred             EEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec----------------CCEEEEEEecC
Confidence            46788999999999998776555556677899999999999999999999987                56899999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEc-----CCCCeEEeeccceeeeccCCCCc
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-----NEGNLKLADFGLARSFSYDHNNT  155 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~-----~~~~vkL~DFG~a~~~~~~~~~~  155 (472)
                      +++|.+++.... .+++.+++.|+.||+.||+|||+++|+||||||+||||+     .++.+||+|||+++.+... ...
T Consensus       116 ~~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~  193 (329)
T 3gbz_A          116 ENDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP-IRQ  193 (329)
T ss_dssp             SEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC------
T ss_pred             CCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc-ccc
Confidence            998888876543 599999999999999999999999999999999999995     4445999999999765432 223


Q ss_pred             cccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCcccc
Q 012062          156 LTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNH  235 (472)
Q Consensus       156 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  235 (472)
                      ....++|..|+|||++.+...++.++||||||||+|+|++|+.||.+.+..+.+.++++..+.+....|+.....+.+..
T Consensus       194 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (329)
T 3gbz_A          194 FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQ  273 (329)
T ss_dssp             ------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred             cCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhh
Confidence            34457799999999998756689999999999999999999999999999999999999999999988888776655444


Q ss_pred             CCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          236 FKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                      ..+..............++.++++||++||..||++|||++|+|+|+||...
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  325 (329)
T 3gbz_A          274 SFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN  325 (329)
T ss_dssp             TCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred             hhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence            3333222233334445688999999999999999999999999999999653


No 23 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=2.5e-47  Score=377.99  Aligned_cols=268  Identities=42%  Similarity=0.825  Sum_probs=222.6

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++..... .....+.+|+++|++++||||+++++++..                .+.+||||||+
T Consensus        23 ~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----------------~~~~~lv~e~~   85 (317)
T 2pmi_A           23 KGLNKTTGVYVALKEVKLDSEE-GTPSTAIREISLMKELKHENIVRLYDVIHT----------------ENKLTLVFEFM   85 (317)
T ss_dssp             EEECSSSCCEEEEEEEECCSTT-CSCHHHHHHHHHHTTCCBTTBCCEEEEECC----------------TTEEEEEEECC
T ss_pred             EEEECCCCcEEEEEEeeccccc-ccHHHHHHHHHHHHhcCCCCcceEEEEEEE----------------CCeEEEEEEec
Confidence            3678899999999999866432 345678899999999999999999999976                56899999999


Q ss_pred             CCChhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCc
Q 012062           81 DHDLTGLADRP-----GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNT  155 (472)
Q Consensus        81 ~g~l~~~~~~~-----~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~  155 (472)
                      +++|.+++...     ...+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++.+.... ..
T Consensus        86 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~  164 (317)
T 2pmi_A           86 DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV-NT  164 (317)
T ss_dssp             CCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC-CC
T ss_pred             CCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCc-cc
Confidence            99888766532     2358999999999999999999999999999999999999999999999999998764322 23


Q ss_pred             cccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCcccc
Q 012062          156 LTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNH  235 (472)
Q Consensus       156 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  235 (472)
                      ....++|+.|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+.+..+++..+.+....|+...+++.+..
T Consensus       165 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  244 (317)
T 2pmi_A          165 FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNP  244 (317)
T ss_dssp             CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCT
T ss_pred             CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhccc
Confidence            34457899999999998756789999999999999999999999999999999999999999999999988777665432


Q ss_pred             CCCchh---hhhh-HHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          236 FKPSRT---MKRR-VREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       236 ~~~~~~---~~~~-~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      ......   .... .......++.++++||++||..||++|||+.|+|+|+||..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  299 (317)
T 2pmi_A          245 NIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE  299 (317)
T ss_dssp             TCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred             ccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhc
Confidence            221111   1111 11112357889999999999999999999999999999954


No 24 
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7.6e-47  Score=379.08  Aligned_cols=273  Identities=43%  Similarity=0.774  Sum_probs=228.5

Q ss_pred             CceeccCCCEEEEEEeecCCcC---CCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEE
Q 012062            1 MAREIKTGEIVALKKIRMDNEK---EGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVF   77 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~---~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVm   77 (472)
                      +|++..+++.||||+++.....   ......+.+|+++++.++|+||+++++++..                .+.+||||
T Consensus        28 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----------------~~~~~lv~   91 (346)
T 1ua2_A           28 KARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH----------------KSNISLVF   91 (346)
T ss_dssp             EEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC----------------TTCCEEEE
T ss_pred             EEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee----------------CCceEEEE
Confidence            3678889999999999864322   2334578899999999999999999999976                55789999


Q ss_pred             ecCCCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccc
Q 012062           78 EYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT  157 (472)
Q Consensus        78 Ey~~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~  157 (472)
                      ||++++|..++......+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.+... .....
T Consensus        92 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~-~~~~~  170 (346)
T 1ua2_A           92 DFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP-NRAYT  170 (346)
T ss_dssp             ECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC-CCCCC
T ss_pred             EcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCC-cccCC
Confidence            99999988888777667999999999999999999999999999999999999999999999999999765432 22334


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCC
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK  237 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  237 (472)
                      ..++|+.|+|||++.+...++.++||||||||+|+|++|.+||.+.+..+.+.++++..+.+....|+.....+.+..+.
T Consensus       171 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  250 (346)
T 1ua2_A          171 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK  250 (346)
T ss_dssp             CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC
T ss_pred             cccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCccccccc
Confidence            56789999999999775668899999999999999999999999999999999999999999999998887766654443


Q ss_pred             CchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCCCCCCC
Q 012062          238 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCD  292 (472)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~~~~~~  292 (472)
                      ...  .......+..++.++++||++||..||++|||+.|+|+|+||...+.+..
T Consensus       251 ~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~~~~~  303 (346)
T 1ua2_A          251 SFP--GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTP  303 (346)
T ss_dssp             CCC--CCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCCCC
T ss_pred             ccC--CCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCCCCCC
Confidence            221  12345566788999999999999999999999999999999987655443


No 25 
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=8.7e-48  Score=382.44  Aligned_cols=268  Identities=42%  Similarity=0.784  Sum_probs=218.5

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++...... ....+.+|+++|++++|+||+++++++..                .+.+||||||+
T Consensus        20 ~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----------------~~~~~lv~e~~   82 (324)
T 3mtl_A           20 KGKSKLTDNLVALKEIRLEHEEG-APCTAIREVSLLKDLKHANIVTLHDIIHT----------------EKSLTLVFEYL   82 (324)
T ss_dssp             EEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEEC----------------SSCEEEEEECC
T ss_pred             EEEECCCCcEEEEEEEecccccc-cchhHHHHHHHHHhcCCCCCCeeeeEEee----------------CCEEEEEeccc
Confidence            36788899999999997654322 22344579999999999999999999986                56789999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccccc
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV  160 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~  160 (472)
                      +++|..++......+++..++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+++..... .......+
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~  161 (324)
T 3mtl_A           83 DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP-TKTYDNEV  161 (324)
T ss_dssp             SEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC------------
T ss_pred             ccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCC-cccccccc
Confidence            99999888876667999999999999999999999999999999999999999999999999999765432 22334457


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCch
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSR  240 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (472)
                      +|..|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+.+..+++..+.+....|+.......+..+....
T Consensus       162 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (324)
T 3mtl_A          162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPK  241 (324)
T ss_dssp             -CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCC
T ss_pred             CcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccccccc
Confidence            79999999999876678999999999999999999999999999999999999999999998888765543332222222


Q ss_pred             hhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          241 TMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      ............++.++++||++||..||++|||++|||+|+||..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  287 (324)
T 3mtl_A          242 YRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLS  287 (324)
T ss_dssp             CCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred             ccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhh
Confidence            2233345556778999999999999999999999999999999964


No 26 
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=1.7e-47  Score=398.26  Aligned_cols=274  Identities=37%  Similarity=0.615  Sum_probs=209.4

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|+++.+++.||||++............+++|+++|++|+|+|||++++++...+.+           ....+||||||+
T Consensus        71 ~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-----------~~~~~~lv~e~~  139 (458)
T 3rp9_A           71 EAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVE-----------KFDELYVVLEIA  139 (458)
T ss_dssp             EEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTT-----------TCCCEEEEECCC
T ss_pred             EEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcc-----------cCceEEEEEecc
Confidence            478899999999999976544444456788999999999999999999999763221           245799999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC-------
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN-------  153 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~-------  153 (472)
                      +++|..++... ..+++..++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+|+.+.....       
T Consensus       140 ~~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~  218 (458)
T 3rp9_A          140 DSDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPI  218 (458)
T ss_dssp             SEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC-
T ss_pred             ccchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCcccccccccc
Confidence            99988888664 4699999999999999999999999999999999999999999999999999987643211       


Q ss_pred             -------------------CccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-----------CCCCCCCC
Q 012062          154 -------------------NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-----------GKPILPGK  203 (472)
Q Consensus       154 -------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-----------G~~pf~~~  203 (472)
                                         ...+..++|+.|+|||++.....++.++||||||||||||++           ++++|.+.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~  298 (458)
T 3rp9_A          219 SPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGS  298 (458)
T ss_dssp             --------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--
T ss_pred             CccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCC
Confidence                               234556789999999988665679999999999999999998           78888776


Q ss_pred             C--------------------hHHHHHHHHHhcCCCCCCCCccCCCCCc--cccCCCchhhhhhHHHHhhhccHHHHHHH
Q 012062          204 N--------------------EAEQLSKIFELCGSPDETIWPGVSKMPA--YNHFKPSRTMKRRVREVFRHFDRHALELL  261 (472)
Q Consensus       204 ~--------------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  261 (472)
                      +                    ..+++..|++.++.+....+........  +....+ ..........+..++.++++||
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~dLl  377 (458)
T 3rp9_A          299 SCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFP-KREGTDLAERFPASSADAIHLL  377 (458)
T ss_dssp             ------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSC-CCCCCCGGGGSTTSCHHHHHHH
T ss_pred             ccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcC-CCCCCCHHHHCCCCCHHHHHHH
Confidence            5                    3678888888888876554443322000  000000 0011223344566789999999


Q ss_pred             HHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          262 EKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       262 ~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                      ++||..||++|+|++|||+||||...
T Consensus       378 ~~mL~~dP~~R~t~~e~L~Hp~f~~~  403 (458)
T 3rp9_A          378 KRMLVFNPNKRITINECLAHPFFKEV  403 (458)
T ss_dssp             HHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             HHHhccCccccCCHHHHhcCHhhhhc
Confidence            99999999999999999999999654


No 27 
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=3.2e-46  Score=367.93  Aligned_cols=269  Identities=41%  Similarity=0.730  Sum_probs=221.7

Q ss_pred             CceeccCCCEEEEEEeecCC---cCCCchhhHHHHHHHHHhcC---CCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEE
Q 012062            1 MAREIKTGEIVALKKIRMDN---EKEGFPITAIREIKILKKLQ---HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTY   74 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~---~~~~~~~~~~~Ei~il~~l~---hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (472)
                      +|++..+++.||||+++...   ........+.+|+.+++.++   |+||+++++++.....           .....+|
T Consensus        27 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~-----------~~~~~~~   95 (308)
T 3g33_A           27 KARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT-----------DREIKVT   95 (308)
T ss_dssp             EEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS-----------SSEEEEE
T ss_pred             EEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC-----------CCceeEE
Confidence            47788999999999997543   22234456778888888775   9999999999986321           1123689


Q ss_pred             EEEecCCCChhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC
Q 012062           75 MVFEYMDHDLTGLADRPG-LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN  153 (472)
Q Consensus        75 iVmEy~~g~l~~~~~~~~-~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~  153 (472)
                      |||||++++|.+++.... ..+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.+..  .
T Consensus        96 lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~--~  173 (308)
T 3g33_A           96 LVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY--Q  173 (308)
T ss_dssp             EEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTT--C
T ss_pred             EEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccCC--C
Confidence            999999999988877644 3499999999999999999999999999999999999999999999999999976542  2


Q ss_pred             CccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCcc
Q 012062          154 NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY  233 (472)
Q Consensus       154 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  233 (472)
                      ......++|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+.++++..+.+....|+....++..
T Consensus       174 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  252 (308)
T 3g33_A          174 MALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRG  252 (308)
T ss_dssp             CCSGGGGCCCSSCCHHHHHT-SCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGG
T ss_pred             cccCCccccccccCchHHcC-CCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhcccc
Confidence            23345678999999999986 56899999999999999999999999999999999999999999988888876654432


Q ss_pred             ccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          234 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      ..   ..............+++++.+||.+||..||++|||+.|+|+|+||..
T Consensus       253 ~~---~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~  302 (308)
T 3g33_A          253 AF---PPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK  302 (308)
T ss_dssp             GS---CCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC--
T ss_pred             cc---CCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccC
Confidence            11   111233455667789999999999999999999999999999999965


No 28 
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.5e-46  Score=382.74  Aligned_cols=270  Identities=36%  Similarity=0.586  Sum_probs=210.6

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcC-CCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ-HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||++............+.+|+.+|+.+. |+|||++++++...+              ...+||||||
T Consensus        27 ~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~--------------~~~~~lv~e~   92 (388)
T 3oz6_A           27 KSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN--------------DRDVYLVFDY   92 (388)
T ss_dssp             EEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT--------------SSCEEEEEEC
T ss_pred             EEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC--------------CCEEEEEecc
Confidence            4788999999999999765444445567789999999997 999999999998632              3478999999


Q ss_pred             CCCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccC--------
Q 012062           80 MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYD--------  151 (472)
Q Consensus        80 ~~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~--------  151 (472)
                      |+++|..++...  .+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+|+.+...        
T Consensus        93 ~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~  170 (388)
T 3oz6_A           93 METDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIP  170 (388)
T ss_dssp             CSEEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGG
T ss_pred             cCcCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccccccccccccc
Confidence            999888877653  5899999999999999999999999999999999999999999999999999875421        


Q ss_pred             ------------CCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC
Q 012062          152 ------------HNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSP  219 (472)
Q Consensus       152 ------------~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~  219 (472)
                                  .....+..++|+.|+|||++.+...++.++||||||||||+|++|+.||.+.+..+++.+++...+.+
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p  250 (388)
T 3oz6_A          171 LSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFP  250 (388)
T ss_dssp             GCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             ccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence                        11233456889999999999876678999999999999999999999999999999999999888877


Q ss_pred             CCCCCccCCCCCc--------------cccCCCchhhhh-hHHH--HhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCC
Q 012062          220 DETIWPGVSKMPA--------------YNHFKPSRTMKR-RVRE--VFRHFDRHALELLEKMLMLDPSQRISAKDALDSE  282 (472)
Q Consensus       220 ~~~~~~~~~~~~~--------------~~~~~~~~~~~~-~~~~--~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~  282 (472)
                      ....+........              ...+........ ....  ....++.++++||++||..||++|+|++|+|+||
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp  330 (388)
T 3oz6_A          251 SNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHP  330 (388)
T ss_dssp             CHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTST
T ss_pred             CHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCH
Confidence            6544332211000              000000000000 0000  0125688999999999999999999999999999


Q ss_pred             CCCC
Q 012062          283 YFWT  286 (472)
Q Consensus       283 ~f~~  286 (472)
                      ||..
T Consensus       331 ~~~~  334 (388)
T 3oz6_A          331 FVSI  334 (388)
T ss_dssp             TTTT
T ss_pred             HHHH
Confidence            9954


No 29 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=1.9e-46  Score=373.82  Aligned_cols=238  Identities=28%  Similarity=0.488  Sum_probs=202.9

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..||+.||||+++...........+.+|+++|+.++||||+++++++..                .+.+||||||+
T Consensus        33 ~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~----------------~~~~~lv~e~~   96 (328)
T 3fe3_A           33 LARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET----------------EKTLYLIMEYA   96 (328)
T ss_dssp             EEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC----------------SSEEEEEECCC
T ss_pred             EEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE----------------CCEEEEEEECC
Confidence            47888999999999998765444455678899999999999999999999987                56899999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR  159 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~  159 (472)
                      ++ +|.+++... ..+++.+++.++.||+.||+|||+++|+||||||+||||+.++++||+|||++..+...  ......
T Consensus        97 ~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~--~~~~~~  173 (328)
T 3fe3_A           97 SGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG--GKLDAF  173 (328)
T ss_dssp             TTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS--CGGGTT
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC--Cccccc
Confidence            85 666666543 46999999999999999999999999999999999999999999999999999765432  334556


Q ss_pred             cccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCc
Q 012062          160 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS  239 (472)
Q Consensus       160 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (472)
                      ++|+.|+|||++.+....+.++|||||||++|+|++|+.||.+.+..+....+.......+                   
T Consensus       174 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p-------------------  234 (328)
T 3fe3_A          174 CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP-------------------  234 (328)
T ss_dssp             SSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-------------------
T ss_pred             cCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-------------------
Confidence            8899999999998754456899999999999999999999999998888887765322111                   


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                                 ..++.++.+||++||..||++|||++|+|+|+||...
T Consensus       235 -----------~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~  271 (328)
T 3fe3_A          235 -----------FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAG  271 (328)
T ss_dssp             -----------TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTT
T ss_pred             -----------CCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCC
Confidence                       1357789999999999999999999999999999653


No 30 
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=6.3e-47  Score=394.64  Aligned_cols=270  Identities=31%  Similarity=0.512  Sum_probs=209.3

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++...........+.+|+++|+.++|+|||+++++|......          .....+||||||+
T Consensus        80 ~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~----------~~~~~~~lv~E~~  149 (464)
T 3ttj_A           80 AAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL----------EEFQDVYLVMELM  149 (464)
T ss_dssp             EEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCST----------TTCCEEEEEEECC
T ss_pred             EEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcc----------ccCCeEEEEEeCC
Confidence            478899999999999986644444566788999999999999999999999764311          1145789999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccccc
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV  160 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~  160 (472)
                      ++++...+..   .+++.+++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+|+....  ....+..+
T Consensus       150 ~~~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~--~~~~~~~~  224 (464)
T 3ttj_A          150 DANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYV  224 (464)
T ss_dssp             SEEHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-------CCCC----
T ss_pred             CCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCC--CcccCCCc
Confidence            9998887754   489999999999999999999999999999999999999999999999999986543  23345568


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCC--------CCc
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK--------MPA  232 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--------~~~  232 (472)
                      +|+.|+|||++.+ ..|+.++||||||||||+|++|+.||.+.+..+++.++++.++.+....|.....        .+.
T Consensus       225 gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~  303 (464)
T 3ttj_A          225 VTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK  303 (464)
T ss_dssp             CCCTTCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCC
T ss_pred             ccccccCHHHHcC-CCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccc
Confidence            8999999999987 5789999999999999999999999999999999999999988876544433211        000


Q ss_pred             cccCCCchhh----hhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          233 YNHFKPSRTM----KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       233 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      +.........    ...........+.++++||++||..||++|+|++|+|+||||..
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          304 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             CCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             cCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence            0000000000    00001111223678999999999999999999999999999964


No 31 
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=1.1e-45  Score=361.88  Aligned_cols=269  Identities=49%  Similarity=0.870  Sum_probs=222.5

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++...........+.+|++++++++|+||+++++++..                .+.+||||||+
T Consensus        21 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~   84 (299)
T 2r3i_A           21 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----------------ENKLYLVFEFL   84 (299)
T ss_dssp             EEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE----------------TTEEEEEEECC
T ss_pred             EEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEec----------------CCceEEEEEcc
Confidence            36788899999999998765555556778899999999999999999999986                56899999999


Q ss_pred             CCChhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccc
Q 012062           81 DHDLTGLADRPG-LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR  159 (472)
Q Consensus        81 ~g~l~~~~~~~~-~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~  159 (472)
                      .++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... ......
T Consensus        85 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~  163 (299)
T 2r3i_A           85 HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHE  163 (299)
T ss_dssp             SEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-BCTTSC
T ss_pred             cCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-cccCcc
Confidence            998888776532 458999999999999999999999999999999999999999999999999987654322 223445


Q ss_pred             cccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCc
Q 012062          160 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS  239 (472)
Q Consensus       160 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (472)
                      .+|..|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+.+.++++..+.+....|+....++.+....+.
T Consensus       164 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (299)
T 2r3i_A          164 VVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK  243 (299)
T ss_dssp             BCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCC
T ss_pred             cccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhc
Confidence            67999999999987555899999999999999999999999999999999999999999988888877765554322211


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                       ............++.++++||++||..||++|||+.|+|+|+||...
T Consensus       244 -~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~  290 (299)
T 2r3i_A          244 -WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV  290 (299)
T ss_dssp             -CCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             -ccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcC
Confidence             11233455566789999999999999999999999999999999653


No 32 
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=2.1e-46  Score=387.45  Aligned_cols=274  Identities=33%  Similarity=0.569  Sum_probs=214.3

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|+++.+++.||||+++...........+++|+++|++|+|+|||++++++......           ....+||||||+
T Consensus        44 ~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~-----------~~~~~~lv~e~~  112 (432)
T 3n9x_A           44 LAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLL-----------KFDELYIVLEIA  112 (432)
T ss_dssp             EEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTT-----------TCCCEEEEEECC
T ss_pred             EEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCC-----------cCCeEEEEEecC
Confidence            478899999999999986544444456788999999999999999999999763211           135789999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC-------
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN-------  153 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~-------  153 (472)
                      +++|..++... ..+++..++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+|+.......       
T Consensus       113 ~~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~  191 (432)
T 3n9x_A          113 DSDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDL  191 (432)
T ss_dssp             SEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC------------
T ss_pred             CcCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccc
Confidence            99988888664 4699999999999999999999999999999999999999999999999999987654321       


Q ss_pred             --------------CccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-----------CCCCCCCCC----
Q 012062          154 --------------NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-----------GKPILPGKN----  204 (472)
Q Consensus       154 --------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-----------G~~pf~~~~----  204 (472)
                                    ...+..++|+.|+|||++.....++.++||||||||||+|++           +.++|.+.+    
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~  271 (432)
T 3n9x_A          192 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPL  271 (432)
T ss_dssp             -------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC-
T ss_pred             cccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCcccccc
Confidence                          124667889999999998666779999999999999999998           566666654    


Q ss_pred             -------------hHHHHHHHHHhcCCCCCCCCccCCCCCcc--ccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCC
Q 012062          205 -------------EAEQLSKIFELCGSPDETIWPGVSKMPAY--NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDP  269 (472)
Q Consensus       205 -------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP  269 (472)
                                   ..+++..+++.++.+....+.........  .... ...........+..+++++++||++||..||
T Consensus       272 ~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP  350 (432)
T 3n9x_A          272 SPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLF-PHRKPINLKQKYPSISDDGINLLESMLKFNP  350 (432)
T ss_dssp             ---------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTS-CCCCCCCHHHHSTTSCHHHHHHHHHHSCSST
T ss_pred             CcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhC-CCCCCCCHHHHCCCCCHHHHHHHHHHhcCCc
Confidence                         46788889999888876554433221000  0000 0011223445567789999999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCC
Q 012062          270 SQRISAKDALDSEYFWTD  287 (472)
Q Consensus       270 ~~R~t~~elL~h~~f~~~  287 (472)
                      ++|+|++|||+||||...
T Consensus       351 ~~R~ta~e~L~Hp~f~~~  368 (432)
T 3n9x_A          351 NKRITIDQALDHPYLKDV  368 (432)
T ss_dssp             TTSCCHHHHHTCGGGTTT
T ss_pred             ccCCCHHHHhcChhhhhc
Confidence            999999999999999654


No 33 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=6.7e-47  Score=379.53  Aligned_cols=231  Identities=23%  Similarity=0.374  Sum_probs=185.8

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCC-CCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-C
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQH-ENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-D   83 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~h-pnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~   83 (472)
                      .+++.||||+++...... ....+++|+++|++|+| ||||+++++|...               .+.+|||||||++ +
T Consensus        92 ~~~k~VAvK~l~~~~~~~-~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~---------------~~~~~iV~Ey~~~G~  155 (353)
T 4ase_A           92 ATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNVVNLLGACTKP---------------GGPLMVIVEFCKFGN  155 (353)
T ss_dssp             TCEEEEEEEEECTTCCHH-HHHHHHHHHHHHHHHCCCTTBCCEEEEECCT---------------TSCCEEEEECCTTEE
T ss_pred             cCCeEEEEEEEccccChH-HHHHHHHHHHHHHHcCCCCcEEEEEEEEEec---------------CCEEEEEEEcCCCCC
Confidence            355789999997654322 34568899999999975 8999999998652               3468999999995 7


Q ss_pred             hhhhhcCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeee
Q 012062           84 LTGLADRP---------------GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF  148 (472)
Q Consensus        84 l~~~~~~~---------------~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~  148 (472)
                      |.+++.+.               ...+++.++..|+.||+.||+|||+++||||||||+||||++++++||+|||+|+.+
T Consensus       156 L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~  235 (353)
T 4ase_A          156 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI  235 (353)
T ss_dssp             HHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCT
T ss_pred             HHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhc
Confidence            77776432               234899999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCCC-ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCcc
Q 012062          149 SYDHNN-TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPG  226 (472)
Q Consensus       149 ~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  226 (472)
                      ...... .....++|+.|||||++.+ ..|+.++||||||||||||+| |+.||.+.+..+.+.+++.....+.      
T Consensus       236 ~~~~~~~~~~~~~gt~~ymAPE~l~~-~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~------  308 (353)
T 4ase_A          236 YKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR------  308 (353)
T ss_dssp             TTCTTSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCC------
T ss_pred             ccCCCceeeccccccccccCHHHHhc-CCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCC------
Confidence            543332 2344578999999999987 679999999999999999998 9999998775555544443221111      


Q ss_pred             CCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          227 VSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                            ....+++++.+||.+||+.||++|||+.||++|
T Consensus       309 ----------------------~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          309 ----------------------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             ----------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------------------CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence                                  012367789999999999999999999999975


No 34 
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.2e-46  Score=379.13  Aligned_cols=270  Identities=36%  Similarity=0.594  Sum_probs=217.4

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..||+.||||++............+.+|+++|+.++|+||+++++++......          .....+||||||+
T Consensus        43 ~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~----------~~~~~~~lv~e~~  112 (367)
T 1cm8_A           43 SAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL----------DDFTDFYLVMPFM  112 (367)
T ss_dssp             EEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSST----------TTCCCCEEEEECC
T ss_pred             EEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcc----------ccCceEEEEEecC
Confidence            367889999999999976554444566788999999999999999999999864211          1124679999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccccc
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV  160 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~  160 (472)
                      +++|..++..  ..+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++....    ..+..+
T Consensus       113 ~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~----~~~~~~  186 (367)
T 1cm8_A          113 GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS----EMTGYV  186 (367)
T ss_dssp             SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS----SCCSSC
T ss_pred             CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeeccccccc----ccCcCc
Confidence            8788877765  3589999999999999999999999999999999999999999999999999987542    234567


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCc--cccCCC
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPA--YNHFKP  238 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~  238 (472)
                      +|+.|+|||++.+...++.++||||||||+|+|++|+.||.+.+..+++..+++..+.+....+..+.....  +....+
T Consensus       187 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  266 (367)
T 1cm8_A          187 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLP  266 (367)
T ss_dssp             SCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSC
T ss_pred             CCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCC
Confidence            899999999998766789999999999999999999999999999999999999888876554433221000  000000


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                       ..........+..++..+++||++||..||++|+|++|+|+|+||..-
T Consensus       267 -~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~  314 (367)
T 1cm8_A          267 -ELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  314 (367)
T ss_dssp             -CCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             -CCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence             000112233445678999999999999999999999999999999654


No 35 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=3.6e-46  Score=374.61  Aligned_cols=239  Identities=28%  Similarity=0.433  Sum_probs=193.3

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..|++.||||+++...... ....+.+|+++|++++|+||+++++++..                .+.+|||||||
T Consensus        28 ~a~~~~~~~~vAiK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~----------------~~~~~lv~E~~   90 (347)
T 3zgw_A           28 LACHILTGEMVAIKIMDKNTLGS-DLPRIKTEIEALKNLRHQHICQLYHVLET----------------ANKIFMVLEYC   90 (347)
T ss_dssp             EEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEEC----------------SSEEEEEEECC
T ss_pred             EEEECCCCCEEEEEEEEccccch-HHHHHHHHHHHHHhCCCCCEeeEEEEEEe----------------CCEEEEEEeCC
Confidence            47889999999999998764333 34568899999999999999999999987                56899999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR  159 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~  159 (472)
                      ++ +|.+++... ..+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||++..............
T Consensus        91 ~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~  169 (347)
T 3zgw_A           91 PGGELFDYIISQ-DRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTC  169 (347)
T ss_dssp             TTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------------
T ss_pred             CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcccccc
Confidence            75 666666543 3699999999999999999999999999999999999999999999999999876654444445566


Q ss_pred             cccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCc
Q 012062          160 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS  239 (472)
Q Consensus       160 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (472)
                      ++|+.|+|||++.+...++.++||||||||||+|++|..||.+.+..+.+.++.......+                   
T Consensus       170 ~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p-------------------  230 (347)
T 3zgw_A          170 CGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVP-------------------  230 (347)
T ss_dssp             --CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC-------------------
T ss_pred             CCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC-------------------
Confidence            8899999999998755568999999999999999999999999998888888865422111                   


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                                 ..++.++.+||++||..||++|||++|||+|+||..+
T Consensus       231 -----------~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~~  267 (347)
T 3zgw_A          231 -----------KWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQD  267 (347)
T ss_dssp             -----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHTT
T ss_pred             -----------CCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcchhcC
Confidence                       1367789999999999999999999999999999653


No 36 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=1.7e-45  Score=371.79  Aligned_cols=240  Identities=26%  Similarity=0.424  Sum_probs=203.8

Q ss_pred             CceeccCCCEEEEEEeecCCcCC----CchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEE
Q 012062            1 MAREIKTGEIVALKKIRMDNEKE----GFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMV   76 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~----~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iV   76 (472)
                      +|+++.||+.||||+++......    .....+.+|+.+|++|+||||++++++|++                ...+|||
T Consensus        30 ~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~----------------~~~~~lv   93 (361)
T 2yab_A           30 KCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN----------------RTDVVLI   93 (361)
T ss_dssp             EEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC----------------SSEEEEE
T ss_pred             EEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe----------------CCEEEEE
Confidence            47888999999999998764322    134678899999999999999999999987                5689999


Q ss_pred             EecCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCC----CeEEeeccceeeeccC
Q 012062           77 FEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG----NLKLADFGLARSFSYD  151 (472)
Q Consensus        77 mEy~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~----~vkL~DFG~a~~~~~~  151 (472)
                      |||+.+ +|.+++.. ...+++.+++.|+.||+.||+|||++||+||||||+||||+.++    .+||+|||+++.+...
T Consensus        94 ~e~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~  172 (361)
T 2yab_A           94 LELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG  172 (361)
T ss_dssp             EECCCSCBHHHHHTT-CSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTT
T ss_pred             EEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCC
Confidence            999975 66666654 44799999999999999999999999999999999999998877    7999999999876532


Q ss_pred             CCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCC
Q 012062          152 HNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMP  231 (472)
Q Consensus       152 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  231 (472)
                        ......++|+.|+|||++.+ ..++.++||||||||+|+|++|..||.+.+..+.+..+.......+           
T Consensus       173 --~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~-----------  238 (361)
T 2yab_A          173 --VEFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD-----------  238 (361)
T ss_dssp             --CCCCCCCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCC-----------
T ss_pred             --CccccCCCCccEECchHHcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC-----------
Confidence              23345678999999999976 5789999999999999999999999999999888888765432211           


Q ss_pred             ccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          232 AYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                     ...+..++..+++||++||..||++|||+.|+|+||||..
T Consensus       239 ---------------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  278 (361)
T 2yab_A          239 ---------------EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP  278 (361)
T ss_dssp             ---------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSC
T ss_pred             ---------------chhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCC
Confidence                           2345568889999999999999999999999999999953


No 37 
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=7.5e-46  Score=379.87  Aligned_cols=269  Identities=38%  Similarity=0.702  Sum_probs=206.7

Q ss_pred             ccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCCCh
Q 012062            5 IKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDL   84 (472)
Q Consensus         5 ~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g~l   84 (472)
                      ..+++.||||+++...    ....+.+|+.+|++|+|+|||+++++|....              ...+||||||++++|
T Consensus        45 ~~~~~~vaiK~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--------------~~~~~lv~e~~~~~l  106 (405)
T 3rgf_A           45 GKDDKDYALKQIEGTG----ISMSACREIALLRELKHPNVISLQKVFLSHA--------------DRKVWLLFDYAEHDL  106 (405)
T ss_dssp             SSCCCCEEEEECSSSS----CCHHHHHHHHHHHHCCCTTBCCCCEEEEETT--------------TTEEEEEEECCSEEH
T ss_pred             CCCCeEEEEEEECCCC----CCHHHHHHHHHHHhcCCCCeeeEeeEEecCC--------------CCeEEEEEeCCCCCH
Confidence            3678999999997443    3346789999999999999999999996522              557999999999988


Q ss_pred             hhhhcC--------CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEE----cCCCCeEEeeccceeeeccCC
Q 012062           85 TGLADR--------PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI----DNEGNLKLADFGLARSFSYDH  152 (472)
Q Consensus        85 ~~~~~~--------~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl----~~~~~vkL~DFG~a~~~~~~~  152 (472)
                      ..++..        ....+++..++.|+.||+.||+|||+++|+||||||+||||    +.++.+||+|||+++.+....
T Consensus       107 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~  186 (405)
T 3rgf_A          107 WHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL  186 (405)
T ss_dssp             HHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC------
T ss_pred             HHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCC
Confidence            876652        12248999999999999999999999999999999999999    677899999999998765322


Q ss_pred             C--CccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHhcCCCCC
Q 012062          153 N--NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNE---------AEQLSKIFELCGSPDE  221 (472)
Q Consensus       153 ~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~---------~~~~~~i~~~~~~~~~  221 (472)
                      .  ......++|+.|+|||++.+...++.++||||||||||+|++|+.||.+.+.         .+++..+++.++.+..
T Consensus       187 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~  266 (405)
T 3rgf_A          187 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPAD  266 (405)
T ss_dssp             ----------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCT
T ss_pred             cccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCCh
Confidence            1  2334567899999999998756689999999999999999999999987665         4889999999999999


Q ss_pred             CCCccCCCCCccccCC----Cch----hhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCCCCCC
Q 012062          222 TIWPGVSKMPAYNHFK----PSR----TMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPC  291 (472)
Q Consensus       222 ~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~~~~~  291 (472)
                      ..|.....++......    ...    .............+..+++||++||..||++|+|++|||+|+||...+.+.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~~~  344 (405)
T 3rgf_A          267 KDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPT  344 (405)
T ss_dssp             TTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSCCC
T ss_pred             hhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCCCc
Confidence            9998877665432110    000    000011111122367899999999999999999999999999998776654


No 38 
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=6.8e-46  Score=375.54  Aligned_cols=271  Identities=37%  Similarity=0.591  Sum_probs=206.5

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++...........+.+|+++|+.|+|+||+++++++.....          ......+||||||+
T Consensus        47 ~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~----------~~~~~~~~lv~e~~  116 (367)
T 2fst_X           47 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----------LEEFNDVYLVTHLM  116 (367)
T ss_dssp             EEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS----------GGGCCCCEEEEECC
T ss_pred             EEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCc----------cccCCeEEEEeccc
Confidence            36788999999999997654443445677899999999999999999999976321          11135689999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccccc
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV  160 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~  160 (472)
                      +++|..++..  ..+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++....    .....+
T Consensus       117 ~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~  190 (367)
T 2fst_X          117 GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD----EMTGYV  190 (367)
T ss_dssp             CEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-------------------
T ss_pred             CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccc----cCCCcC
Confidence            8888777765  3699999999999999999999999999999999999999999999999999976542    234467


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCc--cccCCC
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPA--YNHFKP  238 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~  238 (472)
                      +|..|+|||++.+...++.++||||||||+|+|++|+.||.+.+..+++..+++.++.+....+..+.....  +.....
T Consensus       191 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~  270 (367)
T 2fst_X          191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT  270 (367)
T ss_dssp             CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSC
T ss_pred             cCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccC
Confidence            899999999998756789999999999999999999999999999999999999988876655544332100  000000


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCCC
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDP  288 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~~  288 (472)
                       ..........+..++..+++||++||..||++|+|+.|+|+|+||....
T Consensus       271 -~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~  319 (367)
T 2fst_X          271 -QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  319 (367)
T ss_dssp             -CCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             -CCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhcc
Confidence             0011234455667889999999999999999999999999999997543


No 39 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=4.4e-45  Score=368.92  Aligned_cols=240  Identities=27%  Similarity=0.393  Sum_probs=202.4

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++...........+.+|+.+|++|+|||||++++++.+                .+.+|||||||
T Consensus        47 ~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~----------------~~~~~lv~e~~  110 (362)
T 2bdw_A           47 RCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE----------------ESFHYLVFDLV  110 (362)
T ss_dssp             EEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC----------------SSEEEEEECCC
T ss_pred             EEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe----------------CCEEEEEEecC
Confidence            36788999999999998765443345678899999999999999999999987                56889999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCC---CeEEeeccceeeeccCCCCcc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG---NLKLADFGLARSFSYDHNNTL  156 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~---~vkL~DFG~a~~~~~~~~~~~  156 (472)
                      .+ +|.+.+... ..+++.+++.++.||+.||+|||+++|+||||||+||||+.++   .+||+|||++......  ...
T Consensus       111 ~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~--~~~  187 (362)
T 2bdw_A          111 TGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS--EAW  187 (362)
T ss_dssp             CSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC--CSC
T ss_pred             CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC--ccc
Confidence            96 666666543 4689999999999999999999999999999999999998654   4999999999766532  233


Q ss_pred             ccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccC
Q 012062          157 TNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF  236 (472)
Q Consensus       157 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  236 (472)
                      ...++|+.|+|||++.+ ..++.++||||||||+|+|++|..||.+.+..+.+..+.......+...             
T Consensus       188 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~-------------  253 (362)
T 2bdw_A          188 HGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPE-------------  253 (362)
T ss_dssp             CCSCSCTTTCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTG-------------
T ss_pred             ccCCCCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCccc-------------
Confidence            45678999999999976 5789999999999999999999999999998888887766433322211             


Q ss_pred             CCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          237 KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                   +..++.++++||.+||..||++|||+.|+|+|+||..
T Consensus       254 -------------~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          254 -------------WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             -------------GGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             -------------ccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence                         2357789999999999999999999999999999953


No 40 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=4.2e-45  Score=365.48  Aligned_cols=237  Identities=28%  Similarity=0.431  Sum_probs=200.1

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|+++.+++.||||+++... ........+.+|+.+|+.++||||++++++|..                .+.+||||||
T Consensus        23 ~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~----------------~~~~~lv~E~   86 (337)
T 1o6l_A           23 LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT----------------HDRLCFVMEY   86 (337)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC----------------SSEEEEEEEC
T ss_pred             EEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe----------------CCEEEEEEeC
Confidence            47889999999999998653 123345678899999999999999999999987                5689999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      +.+ +|..++.+ ...+++.+++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++..... ......
T Consensus        87 ~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~~~~~~  164 (337)
T 1o6l_A           87 ANGGELFFHLSR-ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATMKT  164 (337)
T ss_dssp             CTTCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-TCCBCC
T ss_pred             CCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccC-CCcccc
Confidence            986 56555544 346899999999999999999999999999999999999999999999999999754322 223445


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                      .+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.......                   
T Consensus       165 ~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~-------------------  224 (337)
T 1o6l_A          165 FCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF-------------------  224 (337)
T ss_dssp             CEECGGGCCGGGGSS-SCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-------------------
T ss_pred             cccChhhCChhhhcC-CCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC-------------------
Confidence            688999999999876 578999999999999999999999999998888777776432111                   


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCC-----CHHHHhcCCCCCC
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRI-----SAKDALDSEYFWT  286 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~-----t~~elL~h~~f~~  286 (472)
                                 ...++.++++||++||..||++|+     +++||++|+||..
T Consensus       225 -----------p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~  266 (337)
T 1o6l_A          225 -----------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             -----------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             -----------CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCC
Confidence                       124678899999999999999999     9999999999954


No 41 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=6.1e-45  Score=377.30  Aligned_cols=240  Identities=26%  Similarity=0.404  Sum_probs=204.4

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|+++.+++.||+|+++...........+.+|+++|++|+|||||++++++.+                .+.+|||||||
T Consensus        29 ~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~----------------~~~~~lv~E~~   92 (444)
T 3soa_A           29 RCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE----------------EGHHYLIFDLV   92 (444)
T ss_dssp             EEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC----------------SSEEEEEECCC
T ss_pred             EEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE----------------CCEEEEEEEeC
Confidence            36788999999999998765444345668899999999999999999999987                66899999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcC---CCCeEEeeccceeeeccCCCCcc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN---EGNLKLADFGLARSFSYDHNNTL  156 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~---~~~vkL~DFG~a~~~~~~~~~~~  156 (472)
                      .+ +|.+.+... ..+++.+++.++.||+.||+|||++||+||||||+||||+.   ++.+||+|||++....... ...
T Consensus        93 ~gg~L~~~i~~~-~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~-~~~  170 (444)
T 3soa_A           93 TGGELFEDIVAR-EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAW  170 (444)
T ss_dssp             BCCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC-CBC
T ss_pred             CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC-cee
Confidence            86 666666544 36999999999999999999999999999999999999984   5679999999997665332 233


Q ss_pred             ccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccC
Q 012062          157 TNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF  236 (472)
Q Consensus       157 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  236 (472)
                      ...++|+.|+|||++.+ ..++.++||||||||+|+|++|..||.+.+..+.+..+.......+...|            
T Consensus       171 ~~~~gt~~Y~APE~l~~-~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~------------  237 (444)
T 3soa_A          171 FGFAGTPGYLSPEVLRK-DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEW------------  237 (444)
T ss_dssp             CCSCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTT------------
T ss_pred             ecccCCcccCCHHHhcC-CCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCcccc------------
Confidence            45688999999999976 57899999999999999999999999999999888888765444333222            


Q ss_pred             CCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCC
Q 012062          237 KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFW  285 (472)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~  285 (472)
                                    ..+++++++||.+||..||++|||+.|+|+|+||.
T Consensus       238 --------------~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~  272 (444)
T 3soa_A          238 --------------DTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS  272 (444)
T ss_dssp             --------------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTH
T ss_pred             --------------ccCCHHHHHHHHHHcCCChhHCCCHHHHhcCcccc
Confidence                          24677899999999999999999999999999995


No 42 
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.5e-45  Score=361.66  Aligned_cols=269  Identities=35%  Similarity=0.593  Sum_probs=207.0

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||++............+.+|++++++++|+||+++++++..                .+.+||||||+
T Consensus        21 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~   84 (311)
T 4agu_A           21 KCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR----------------KRRLHLVFEYC   84 (311)
T ss_dssp             EEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE----------------TTEEEEEEECC
T ss_pred             EEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec----------------CCeEEEEEEeC
Confidence            36788999999999997665444445667899999999999999999999986                56899999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccccc
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV  160 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~  160 (472)
                      +++++..+......+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++....... ......+
T Consensus        85 ~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~  163 (311)
T 4agu_A           85 DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS-DYYDDEV  163 (311)
T ss_dssp             SEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----------
T ss_pred             CCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc-cccCCCc
Confidence            987666555555579999999999999999999999999999999999999999999999999998765322 2334457


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCC-Cc
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK-PS  239 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~  239 (472)
                      +|..|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+.+..+.+.........+........+.... +.
T Consensus       164 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (311)
T 4agu_A          164 ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPD  243 (311)
T ss_dssp             --GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCC
T ss_pred             CCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCC
Confidence            89999999999876678999999999999999999999999999999888887765543321111100000000000 00


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      ..........+..++..+.+||++||..||++|||++|||+|+||+.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  290 (311)
T 4agu_A          244 PEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFEN  290 (311)
T ss_dssp             CSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTT
T ss_pred             ccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHh
Confidence            01112233445678899999999999999999999999999999954


No 43 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=1.4e-44  Score=354.97  Aligned_cols=237  Identities=26%  Similarity=0.442  Sum_probs=200.3

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++.....  ....+.+|+.++++++||||+++++++..                .+.+||||||+
T Consensus        38 ~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----------------~~~~~lv~e~~   99 (297)
T 3fxz_A           38 TAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLV----------------GDELWVVMEYL   99 (297)
T ss_dssp             EEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCCTTBCCEEEEEEE----------------TTEEEEEEECC
T ss_pred             EEEECCCCcEEEEEEeeccccc--HHHHHHHHHHHHhcCCCCCCCeEeEEEEE----------------CCEEEEEEECC
Confidence            3678899999999999865433  35567899999999999999999999987                56799999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR  159 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~  159 (472)
                      ++ +|.+++.+.  .+++.+++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++....... ......
T Consensus       100 ~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~  176 (297)
T 3fxz_A          100 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSTM  176 (297)
T ss_dssp             TTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT-CCBCCC
T ss_pred             CCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc-cccCCc
Confidence            75 666666543  58999999999999999999999999999999999999999999999999998765433 233456


Q ss_pred             cccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCc
Q 012062          160 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS  239 (472)
Q Consensus       160 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (472)
                      ++|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+.+..+.........                  
T Consensus       177 ~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~------------------  237 (297)
T 3fxz_A          177 VGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ------------------  237 (297)
T ss_dssp             CSCGGGCCHHHHHC-SCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCS------------------
T ss_pred             cCCcCccChhhhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC------------------
Confidence            78999999999987 57899999999999999999999999999888777766543221110                  


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                               ....++..+++||.+||..||++|||+.|+|+|+||..
T Consensus       238 ---------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~  275 (297)
T 3fxz_A          238 ---------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKI  275 (297)
T ss_dssp             ---------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred             ---------CccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcc
Confidence                     01246788999999999999999999999999999964


No 44 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=1.6e-45  Score=370.78  Aligned_cols=237  Identities=26%  Similarity=0.421  Sum_probs=196.4

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEe
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFE   78 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmE   78 (472)
                      +|+++.+++.||||+++... ........+.+|+.+|+.+ +||||++++++|..                .+.+|||||
T Consensus        41 ~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~----------------~~~~~lv~E  104 (353)
T 3txo_A           41 LARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT----------------PDRLFFVME  104 (353)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC----------------SSEEEEEEE
T ss_pred             EEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe----------------CCEEEEEEe
Confidence            47889999999999998652 1223456678999999998 79999999999987                568999999


Q ss_pred             cCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccc
Q 012062           79 YMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT  157 (472)
Q Consensus        79 y~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~  157 (472)
                      ||.+ +|..++.+. ..+++.+++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+|+..... .....
T Consensus       105 ~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~-~~~~~  182 (353)
T 3txo_A          105 FVNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN-GVTTA  182 (353)
T ss_dssp             CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-------
T ss_pred             CCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccC-Ccccc
Confidence            9996 666665543 46999999999999999999999999999999999999999999999999999753322 22344


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCC
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK  237 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  237 (472)
                      ..+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+.++.......+                 
T Consensus       183 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p-----------------  244 (353)
T 3txo_A          183 TFCGTPDYIAPEILQE-MLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP-----------------  244 (353)
T ss_dssp             ---CCGGGCCHHHHHH-HHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-----------------
T ss_pred             ccCCCcCeEChhhcCC-CCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC-----------------
Confidence            5689999999999986 5689999999999999999999999999999998888876322111                 


Q ss_pred             CchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCH------HHHhcCCCCCC
Q 012062          238 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISA------KDALDSEYFWT  286 (472)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~------~elL~h~~f~~  286 (472)
                                   ..++.++++||++||..||++|+++      +||++|+||..
T Consensus       245 -------------~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~  286 (353)
T 3txo_A          245 -------------TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE  286 (353)
T ss_dssp             -------------TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTT
T ss_pred             -------------CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccC
Confidence                         1367789999999999999999999      89999999954


No 45 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=3.6e-44  Score=356.91  Aligned_cols=240  Identities=28%  Similarity=0.434  Sum_probs=202.2

Q ss_pred             CceeccCCCEEEEEEeecCCcCC----CchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEE
Q 012062            1 MAREIKTGEIVALKKIRMDNEKE----GFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMV   76 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~----~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iV   76 (472)
                      +|+++.+++.||||+++......    .....+.+|+.+|++|+||||+++++++..                ...+|||
T Consensus        29 ~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----------------~~~~~lv   92 (326)
T 2y0a_A           29 KCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN----------------KTDVILI   92 (326)
T ss_dssp             EEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC----------------SSEEEEE
T ss_pred             EEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe----------------CCEEEEE
Confidence            37788999999999998654322    134568899999999999999999999986                5689999


Q ss_pred             EecCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCC----CeEEeeccceeeeccC
Q 012062           77 FEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG----NLKLADFGLARSFSYD  151 (472)
Q Consensus        77 mEy~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~----~vkL~DFG~a~~~~~~  151 (472)
                      |||+.+ +|.+++.. ...+++.+++.++.||+.||+|||+++|+||||||+||||+.++    .+||+|||+++.+...
T Consensus        93 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~  171 (326)
T 2y0a_A           93 LELVAGGELFDFLAE-KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG  171 (326)
T ss_dssp             EECCCSCBHHHHHTT-SSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTT
T ss_pred             EEcCCCCCHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCC
Confidence            999986 66666654 44699999999999999999999999999999999999999887    7999999999876532


Q ss_pred             CCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCC
Q 012062          152 HNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMP  231 (472)
Q Consensus       152 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  231 (472)
                        ......++|+.|+|||++.+ ..++.++||||||||+|+|++|..||.+.+..+.+..+........           
T Consensus       172 --~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-----------  237 (326)
T 2y0a_A          172 --NEFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE-----------  237 (326)
T ss_dssp             --SCCCCCCSCTTTCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCC-----------
T ss_pred             --CccccccCCcCcCCceeecC-CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcC-----------
Confidence              23344678999999999876 5789999999999999999999999999988888877765422111           


Q ss_pred             ccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          232 AYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                     ...+..++..+++||++||..||++|||+.|+|+|+||..
T Consensus       238 ---------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  277 (326)
T 2y0a_A          238 ---------------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP  277 (326)
T ss_dssp             ---------------HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSC
T ss_pred             ---------------ccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccC
Confidence                           1334567889999999999999999999999999999954


No 46 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.4e-45  Score=366.46  Aligned_cols=239  Identities=21%  Similarity=0.384  Sum_probs=204.3

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||+|+++....   ....+.+|+.+|+.++||||+++++++.+                .+.+|||||||
T Consensus        23 ~~~~~~~~~~~a~K~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~~~~~~~~----------------~~~~~lv~e~~   83 (321)
T 1tki_A           23 RCVETSSKKTYMAKFVKVKGT---DQVLVKKEISILNIARHRNILHLHESFES----------------MEELVMIFEFI   83 (321)
T ss_dssp             EEEETTTTEEEEEEEECCCTH---HHHHHHHHHHHHHHSCCTTBCCEEEEEEE----------------TTEEEEEECCC
T ss_pred             EEEECCCCcEEEEEEEecCcc---cHHHHHHHHHHHHhCCCCCCCeEeEEEec----------------CCEEEEEEEeC
Confidence            367889999999999975432   24467899999999999999999999987                56899999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcC--CCCeEEeeccceeeeccCCCCccc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN--EGNLKLADFGLARSFSYDHNNTLT  157 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~--~~~vkL~DFG~a~~~~~~~~~~~~  157 (472)
                      ++ +|.+.+......+++.+++.++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.+...  ....
T Consensus        84 ~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~--~~~~  161 (321)
T 1tki_A           84 SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG--DNFR  161 (321)
T ss_dssp             CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT--CEEE
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC--Cccc
Confidence            86 777777766667999999999999999999999999999999999999987  788999999999876432  2334


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCC
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK  237 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  237 (472)
                      ..++|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+........                 
T Consensus       162 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-----------------  223 (321)
T 1tki_A          162 LLFTAPEYYAPEVHQH-DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFD-----------------  223 (321)
T ss_dssp             EEESCGGGSCHHHHTT-CEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC-----------------
T ss_pred             cccCChhhcCcHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCC-----------------
Confidence            4578999999999976 5678999999999999999999999999999888888866432221                 


Q ss_pred             CchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          238 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                               ...+..++.++++||++||..||++|||+.|+|+|+||...
T Consensus       224 ---------~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          224 ---------EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             ---------HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             ---------hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence                     13345678899999999999999999999999999999754


No 47 
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=3e-45  Score=365.03  Aligned_cols=269  Identities=32%  Similarity=0.624  Sum_probs=209.0

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||++............+.+|++++++++|+||+++++++..                .+.+||||||+
T Consensus        43 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----------------~~~~~lv~e~~  106 (331)
T 4aaa_A           43 KCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK----------------KKRWYLVFEFV  106 (331)
T ss_dssp             EEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE----------------TTEEEEEEECC
T ss_pred             EEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec----------------CCEEEEEEecC
Confidence            36788999999999997665444445667899999999999999999999986                56899999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccccc
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV  160 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~  160 (472)
                      +++++..+......+++..++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+++.+.... ......+
T Consensus       107 ~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~  185 (331)
T 4aaa_A          107 DHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-EVYDDEV  185 (331)
T ss_dssp             SEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC-------------CC
T ss_pred             CcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc-cccCCCc
Confidence            987776665545579999999999999999999999999999999999999999999999999997654322 2334457


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCC-Cc
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK-PS  239 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~  239 (472)
                      +|..|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+.+..+....+......+......+.+.... +.
T Consensus       186 ~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (331)
T 4aaa_A          186 ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPE  265 (331)
T ss_dssp             CCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCC
T ss_pred             CCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCcc
Confidence            89999999999875578999999999999999999999999999999888887766554322111111111100000 01


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      ..........+..+++.+.+||.+||..||++|||+.|||+|+||..
T Consensus       266 ~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  312 (331)
T 4aaa_A          266 IKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM  312 (331)
T ss_dssp             CSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred             ccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhcc
Confidence            11122344555678999999999999999999999999999999943


No 48 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=3.2e-44  Score=356.87  Aligned_cols=242  Identities=31%  Similarity=0.466  Sum_probs=194.0

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++...... ....+.+|+.+++.++|+||+++++++..                .+.+|||||||
T Consensus        25 ~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~~~~~~~~----------------~~~~~lv~e~~   87 (323)
T 3tki_A           25 LAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGHRRE----------------GNIQYLFLEYC   87 (323)
T ss_dssp             EEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEEC----------------SSEEEEEEECC
T ss_pred             EEEECCCCcEEEEEEEEcccccc-hHHHHHHHHHHHHhCCCCCCCeEEEEEec----------------CCeEEEEEEcC
Confidence            46788999999999997654322 34567899999999999999999999987                56889999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCC-CCcccc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDH-NNTLTN  158 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~-~~~~~~  158 (472)
                      ++ +|.+++. ....+++.+++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+++.+.... ......
T Consensus        88 ~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  166 (323)
T 3tki_A           88 SGGELFDRIE-PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK  166 (323)
T ss_dssp             TTEEGGGGSB-TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCS
T ss_pred             CCCcHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCC
Confidence            86 5666554 44569999999999999999999999999999999999999999999999999998764332 223345


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                      .++|+.|+|||++.+...++.++|||||||++|+|++|+.||...+...............                   
T Consensus       167 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-------------------  227 (323)
T 3tki_A          167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-------------------  227 (323)
T ss_dssp             CCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT-------------------
T ss_pred             CccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc-------------------
Confidence            6789999999999875545788999999999999999999998766543332222211100                   


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                              ...+..++..+++||.+||..||++|||+.|+|+|+||...
T Consensus       228 --------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~  268 (323)
T 3tki_A          228 --------LNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP  268 (323)
T ss_dssp             --------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             --------CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence                    01123578889999999999999999999999999999653


No 49 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=1.7e-44  Score=358.24  Aligned_cols=234  Identities=24%  Similarity=0.402  Sum_probs=200.0

Q ss_pred             CceeccCCCEEEEEEeecCCc-CCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|+++.+++.||||+++.... .......+.+|+.+|+.++||||+++++++.+                ...+||||||
T Consensus        24 ~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~----------------~~~~~lv~e~   87 (318)
T 1fot_A           24 LIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD----------------AQQIFMIMDY   87 (318)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC----------------SSEEEEEECC
T ss_pred             EEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe----------------CCEEEEEEeC
Confidence            478889999999999986532 22345667899999999999999999999987                5689999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      +.+ +|.+++.+. ..+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++....    ....
T Consensus        88 ~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~----~~~~  162 (318)
T 1fot_A           88 IEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYT  162 (318)
T ss_dssp             CCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS----CBCC
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC----cccc
Confidence            986 666666543 4699999999999999999999999999999999999999999999999999986542    2234


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                      .++|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+.++.......                   
T Consensus       163 ~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-------------------  222 (318)
T 1fot_A          163 LCGTPDYIAPEVVST-KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF-------------------  222 (318)
T ss_dssp             CCSCTTTCCHHHHTT-CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCC-------------------
T ss_pred             ccCCccccCHhHhcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-------------------
Confidence            578999999999986 678999999999999999999999999999888888886532111                   


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCC-----CHHHHhcCCCCCC
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRI-----SAKDALDSEYFWT  286 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~-----t~~elL~h~~f~~  286 (472)
                                 ...++.++++||++||..||++|+     +++||++|+||..
T Consensus       223 -----------p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~  264 (318)
T 1fot_A          223 -----------PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE  264 (318)
T ss_dssp             -----------CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred             -----------CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccC
Confidence                       123677899999999999999999     9999999999954


No 50 
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=7.7e-45  Score=367.01  Aligned_cols=273  Identities=37%  Similarity=0.619  Sum_probs=217.9

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++.... ......+.+|+++|++++|+||+++++++.....+           ....+||||||+
T Consensus        45 ~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-----------~~~~~~iv~e~~  112 (364)
T 3qyz_A           45 SAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE-----------QMKDVYIVQDLM  112 (364)
T ss_dssp             EEEETTTTEEEEEEEECCTTC-HHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTT-----------TCCCEEEEEECC
T ss_pred             EEEECCCCeEEEEEEeccccC-cHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcc-----------ccceEEEEEccc
Confidence            467889999999999975432 22346778999999999999999999999764321           135689999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC--Ccccc
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN--NTLTN  158 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~--~~~~~  158 (472)
                      +++|.+++...  .+++.+++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+++.......  .....
T Consensus       113 ~~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  190 (364)
T 3qyz_A          113 ETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE  190 (364)
T ss_dssp             SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCC
T ss_pred             CcCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccc
Confidence            99988877653  589999999999999999999999999999999999999999999999999987654322  22345


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCcccc-CC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNH-FK  237 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~  237 (472)
                      .++|+.|+|||++.+...++.++||||||||+|+|++|+.||.+.+..+.+..+....+.+....+........... ..
T Consensus       191 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (364)
T 3qyz_A          191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS  270 (364)
T ss_dssp             CCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHT
T ss_pred             cccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHh
Confidence            67899999999987766689999999999999999999999999999999999998887776544433221100000 00


Q ss_pred             CchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          238 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                      ........+...+..++.++++||++||..||++|||+.|||+|+||...
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          271 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             SCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             cCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence            00011122345556788999999999999999999999999999999654


No 51 
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=7.3e-45  Score=374.51  Aligned_cols=266  Identities=33%  Similarity=0.569  Sum_probs=207.6

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||++..+..      ...+|+++|++|+|+|||+++++|...+..          .....++|||||+
T Consensus        72 ~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~~----------~~~~~~~lv~e~~  135 (420)
T 1j1b_A           72 QAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEK----------KDEVYLNLVLDYV  135 (420)
T ss_dssp             EEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEETT----------TTEEEEEEEEECC
T ss_pred             EEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCCC----------CcceeEEeehhcc
Confidence            467889999999999975432      123799999999999999999998653211          1133578999999


Q ss_pred             CCChhhhhc---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCC-CCeEEeeccceeeeccCCCCcc
Q 012062           81 DHDLTGLAD---RPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE-GNLKLADFGLARSFSYDHNNTL  156 (472)
Q Consensus        81 ~g~l~~~~~---~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~-~~vkL~DFG~a~~~~~~~~~~~  156 (472)
                      .+++..++.   .....+++..++.|+.||+.||+|||+++|+||||||+||||+.+ +.+||+|||+++.+...  ...
T Consensus       136 ~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~--~~~  213 (420)
T 1j1b_A          136 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPN  213 (420)
T ss_dssp             CEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT--CCC
T ss_pred             cccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccC--CCc
Confidence            987766554   344579999999999999999999999999999999999999965 56899999999876432  223


Q ss_pred             ccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccC
Q 012062          157 TNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF  236 (472)
Q Consensus       157 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  236 (472)
                      ...++|+.|+|||++.+...++.++||||||||||||++|+.||.+.+..+++.++++.++.+....|....  +.+..+
T Consensus       214 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~--~~~~~~  291 (420)
T 1j1b_A          214 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEF  291 (420)
T ss_dssp             CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHC--SCCCCC
T ss_pred             eeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC--hhhhhh
Confidence            446789999999999875678999999999999999999999999999999999999888776544333221  111111


Q ss_pred             CCchhhhhhHHH-HhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          237 KPSRTMKRRVRE-VFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       237 ~~~~~~~~~~~~-~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      .........+.. +...++.++++||++||..||++|+|+.|+|+|+||..
T Consensus       292 ~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~  342 (420)
T 1j1b_A          292 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE  342 (420)
T ss_dssp             CCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             ccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcc
Confidence            111111112222 23467889999999999999999999999999999953


No 52 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.5e-44  Score=352.69  Aligned_cols=241  Identities=28%  Similarity=0.407  Sum_probs=192.9

Q ss_pred             CceeccCCCEEEEEEeecCCcCC------------------------CchhhHHHHHHHHHhcCCCCccceeEEeeCCCC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKE------------------------GFPITAIREIKILKKLQHENVIKLKEIVTSPGP   56 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~------------------------~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   56 (472)
                      +|++..+++.||||+++......                        .....+.+|+++|++|+|+||+++++++.... 
T Consensus        31 ~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-  109 (298)
T 2zv2_A           31 LAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPN-  109 (298)
T ss_dssp             EEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTBCCEEEEEECSS-
T ss_pred             EEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC-
Confidence            47788999999999997653211                        12356789999999999999999999998632 


Q ss_pred             CCCCCCCCCCCCcCCeEEEEEecCCCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCC
Q 012062           57 ERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN  136 (472)
Q Consensus        57 ~~~~~~~~~~~~~~~~~~iVmEy~~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~  136 (472)
                                   ...+||||||++++.+..+.. ...+++.+++.++.||+.||+|||+++|+||||||+||||+.++.
T Consensus       110 -------------~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~  175 (298)
T 2zv2_A          110 -------------EDHLYMVFELVNQGPVMEVPT-LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGH  175 (298)
T ss_dssp             -------------SSEEEEEEECCTTCBSCCSSC-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC
T ss_pred             -------------CCEEEEEEecCCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCC
Confidence                         457899999998644333332 236999999999999999999999999999999999999999999


Q ss_pred             eEEeeccceeeeccCCCCccccccccCCCCChhhhcCCCC--CCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 012062          137 LKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATK--YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFE  214 (472)
Q Consensus       137 vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~--~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~  214 (472)
                      +||+|||+++.+.... ......++|+.|+|||++.+...  ++.++|||||||++|+|++|+.||...+.......+..
T Consensus       176 ~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~  254 (298)
T 2zv2_A          176 IKIADFGVSNEFKGSD-ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKS  254 (298)
T ss_dssp             EEECCCTTCEECSSSS-CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             EEEecCCCcccccccc-ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhc
Confidence            9999999998765332 22344578999999999876432  36789999999999999999999998887776666644


Q ss_pred             hcCCCCCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCC
Q 012062          215 LCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFW  285 (472)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~  285 (472)
                      .....+.                            ...+++++++||.+||..||++|||+.|||+|+||.
T Consensus       255 ~~~~~~~----------------------------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          255 QALEFPD----------------------------QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             CCCCCCS----------------------------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             ccCCCCC----------------------------ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            2211110                            023677899999999999999999999999999984


No 53 
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=2.1e-44  Score=348.99  Aligned_cols=237  Identities=29%  Similarity=0.493  Sum_probs=189.6

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||+++... ........+.+|+++++.++|+||+++++++.+                .+.+||||||
T Consensus        31 ~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~   94 (275)
T 2eue_A           31 LAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS----------------KDEIIMVIEY   94 (275)
T ss_dssp             EEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEC----------------SSCEEEEEEC
T ss_pred             EEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec----------------CCeEEEEehh
Confidence            36788999999999998654 233445678899999999999999999999986                5578999999


Q ss_pred             CCCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccc
Q 012062           80 MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR  159 (472)
Q Consensus        80 ~~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~  159 (472)
                      +.+++.+.+.... .+++.+++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++......  ......
T Consensus        95 ~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~  171 (275)
T 2eue_A           95 AGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTS  171 (275)
T ss_dssp             CCEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC--------------
T ss_pred             cCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCc--ccccCC
Confidence            9988888776653 6999999999999999999999999999999999999999999999999999765432  223345


Q ss_pred             cccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCc
Q 012062          160 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS  239 (472)
Q Consensus       160 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (472)
                      ++|+.|+|||++.+....+.++|||||||++|+|++|+.||...+.......+.......+                   
T Consensus       172 ~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-------------------  232 (275)
T 2eue_A          172 CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP-------------------  232 (275)
T ss_dssp             ---CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC-------------------
T ss_pred             CCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-------------------
Confidence            6899999999998754457899999999999999999999999888877777755322111                   


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                 ..++..+.+||++||+.||++|||+.|+|+|+||+.
T Consensus       233 -----------~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~  268 (275)
T 2eue_A          233 -----------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             -----------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHT
T ss_pred             -----------ccCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCeecc
Confidence                       236778999999999999999999999999999965


No 54 
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=2.5e-45  Score=371.78  Aligned_cols=270  Identities=30%  Similarity=0.512  Sum_probs=200.9

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++...........+.+|+.+++.++|+||+++++++......          .....+||||||+
T Consensus        43 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~----------~~~~~~~lv~e~~  112 (371)
T 2xrw_A           43 AAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL----------EEFQDVYIVMELM  112 (371)
T ss_dssp             EEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCST----------TTCCEEEEEEECC
T ss_pred             EEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccc----------ccccceEEEEEcC
Confidence            367889999999999986544444456788999999999999999999999763211          1134789999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccccc
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV  160 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~  160 (472)
                      +++|.+.+..   .+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++.....  ......+
T Consensus       113 ~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~  187 (371)
T 2xrw_A          113 DANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYV  187 (371)
T ss_dssp             SEEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----------------
T ss_pred             CCCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccccc--cccCCce
Confidence            9988887753   4899999999999999999999999999999999999999999999999999765432  2334467


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCC--------CCc
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK--------MPA  232 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--------~~~  232 (472)
                      +|+.|+|||++.+ ..++.++||||||||+|+|++|+.||.+.+..+.+..+++..+.+....+.....        .+.
T Consensus       188 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (371)
T 2xrw_A          188 VTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPK  266 (371)
T ss_dssp             --CTTCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCC
T ss_pred             ecCCccCHHHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCcc
Confidence            8999999999987 5789999999999999999999999999999999999988776654333322110        000


Q ss_pred             cccCCCchh----hhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          233 YNHFKPSRT----MKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       233 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      +........    ............+.++++||++||..||++|||++|+|+|+||..
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  324 (371)
T 2xrw_A          267 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  324 (371)
T ss_dssp             CCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             ccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence            000000000    000001112234678999999999999999999999999999953


No 55 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=6.1e-44  Score=363.60  Aligned_cols=240  Identities=24%  Similarity=0.405  Sum_probs=202.4

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|+++.+++.||+|+++.....  ....+.+|+++|+.|+|+|||++++++.+                ...+|||||||
T Consensus        69 ~~~~~~~~~~~a~K~~~~~~~~--~~~~~~~E~~il~~l~hpnIv~~~~~~~~----------------~~~~~lv~E~~  130 (387)
T 1kob_A           69 RCVEKATGRVFVAKFINTPYPL--DKYTVKNEISIMNQLHHPKLINLHDAFED----------------KYEMVLILEFL  130 (387)
T ss_dssp             EEEETTTCCEEEEEEEECCSHH--HHHHHHHHHHHHTTCCSTTBCCEEEEEEC----------------SSEEEEEEECC
T ss_pred             EEEECCCCCEEEEEEecccchh--hHHHHHHHHHHHHhCCCcCCCeEEEEEEe----------------CCEEEEEEEcC
Confidence            3678899999999999865322  23467899999999999999999999986                56899999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcC--CCCeEEeeccceeeeccCCCCccc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN--EGNLKLADFGLARSFSYDHNNTLT  157 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~--~~~vkL~DFG~a~~~~~~~~~~~~  157 (472)
                      .+ +|.+++......+++.+++.++.||+.||+|||++||+||||||+||||+.  ++.+||+|||+++.....  ....
T Consensus       131 ~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~--~~~~  208 (387)
T 1kob_A          131 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD--EIVK  208 (387)
T ss_dssp             CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT--SCEE
T ss_pred             CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCC--ccee
Confidence            85 777777766667999999999999999999999999999999999999974  467999999999876532  2233


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCC
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK  237 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  237 (472)
                      ..++|+.|+|||++.+ ..++.++||||||||+|+|++|..||.+.+..+.+..+...........              
T Consensus       209 ~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~--------------  273 (387)
T 1kob_A          209 VTTATAEFAAPEIVDR-EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDA--------------  273 (387)
T ss_dssp             EECSSGGGCCHHHHTT-CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSST--------------
T ss_pred             eeccCCCccCchhccC-CCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccc--------------
Confidence            4578999999999976 5689999999999999999999999999998888887766433222211              


Q ss_pred             CchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          238 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                                  +..++.++++||++||..||++|||+.|+|+|+||...
T Consensus       274 ------------~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  311 (387)
T 1kob_A          274 ------------FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  311 (387)
T ss_dssp             ------------TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             ------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCC
Confidence                        12467889999999999999999999999999999764


No 56 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=4.5e-44  Score=365.26  Aligned_cols=237  Identities=24%  Similarity=0.393  Sum_probs=191.4

Q ss_pred             CceeccCCCEEEEEEeecCCc-CCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEe
Q 012062            1 MAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFE   78 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmE   78 (472)
                      +|+++.+++.||||++++... .......+.+|+.+|+++ +|||||+++++|.+                .+.+|||||
T Consensus        70 ~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~----------------~~~~~lV~E  133 (396)
T 4dc2_A           70 LVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT----------------ESRLFFVIE  133 (396)
T ss_dssp             EEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC----------------SSEEEEEEE
T ss_pred             EEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE----------------CCEEEEEEE
Confidence            478899999999999987632 233445678999999887 89999999999987                668999999


Q ss_pred             cCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccc
Q 012062           79 YMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT  157 (472)
Q Consensus        79 y~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~  157 (472)
                      ||.+ +|..++.+. ..+++..++.|+.||+.||+|||++||+||||||+||||+.++++||+|||+|+..... .....
T Consensus       134 ~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~-~~~~~  211 (396)
T 4dc2_A          134 YVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTS  211 (396)
T ss_dssp             CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-TCCBC
T ss_pred             cCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccC-CCccc
Confidence            9986 565555543 46999999999999999999999999999999999999999999999999999753322 23345


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCC---------hHHHHHHHHHhcCCCCCCCCccCC
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKN---------EAEQLSKIFELCGSPDETIWPGVS  228 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~---------~~~~~~~i~~~~~~~~~~~~~~~~  228 (472)
                      ..+||+.|+|||++.+ ..++.++||||||||+|+|++|+.||....         .......+......          
T Consensus       212 ~~~gt~~Y~aPE~l~~-~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~----------  280 (396)
T 4dc2_A          212 TFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR----------  280 (396)
T ss_dssp             CCCBCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC----------
T ss_pred             cccCCcccCCchhhcC-CCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC----------
Confidence            5789999999999987 678999999999999999999999996432         12233333221110          


Q ss_pred             CCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCH------HHHhcCCCCCC
Q 012062          229 KMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISA------KDALDSEYFWT  286 (472)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~------~elL~h~~f~~  286 (472)
                                          +...++.++++||++||..||++|+++      +||++|+||..
T Consensus       281 --------------------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~  324 (396)
T 4dc2_A          281 --------------------IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  324 (396)
T ss_dssp             --------------------CCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTT
T ss_pred             --------------------CCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccC
Confidence                                112467889999999999999999985      89999999954


No 57 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=2.5e-44  Score=361.81  Aligned_cols=241  Identities=30%  Similarity=0.474  Sum_probs=196.0

Q ss_pred             CceeccCCCEEEEEEeecCC---cCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEE
Q 012062            1 MAREIKTGEIVALKKIRMDN---EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVF   77 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~---~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVm   77 (472)
                      +|+++.+++.||||+++...   ........+.+|+.+++.|+||||+++++++..                .+.+||||
T Consensus        42 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~----------------~~~~~lv~  105 (351)
T 3c0i_A           42 RCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS----------------DGMLYMVF  105 (351)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE----------------TTEEEEEE
T ss_pred             EEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe----------------CCEEEEEE
Confidence            36788999999999997542   112235678899999999999999999999987                56899999


Q ss_pred             ecCCC-ChhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCC---eEEeeccceeeecc
Q 012062           78 EYMDH-DLTGLADR---PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADFGLARSFSY  150 (472)
Q Consensus        78 Ey~~g-~l~~~~~~---~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~---vkL~DFG~a~~~~~  150 (472)
                      |||++ +|.+.+.+   ....+++..++.++.||+.||+|||+++|+||||||+||||+.++.   +||+|||++..+..
T Consensus       106 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~  185 (351)
T 3c0i_A          106 EFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE  185 (351)
T ss_dssp             ECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCT
T ss_pred             eCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecC
Confidence            99995 66555543   2345899999999999999999999999999999999999987665   99999999987654


Q ss_pred             CCCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCC
Q 012062          151 DHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM  230 (472)
Q Consensus       151 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  230 (472)
                      .. ......++|+.|+|||++.+ ..++.++||||||||+|+|++|..||.+.+ .+.+..+.......           
T Consensus       186 ~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~-----------  251 (351)
T 3c0i_A          186 SG-LVAGGRVGTPHFMAPEVVKR-EPYGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKM-----------  251 (351)
T ss_dssp             TS-CBCCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCCC-----------
T ss_pred             CC-eeecCCcCCcCccCHHHHcC-CCCCchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCCC-----------
Confidence            32 22345678999999999986 568999999999999999999999998754 34444444321111           


Q ss_pred             CccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          231 PAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                     ....+..++.++++||++||..||++|||+.|+|+|+||..
T Consensus       252 ---------------~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          252 ---------------NPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             ---------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             ---------------CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcC
Confidence                           11234567889999999999999999999999999999954


No 58 
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=1.8e-44  Score=365.35  Aligned_cols=268  Identities=37%  Similarity=0.615  Sum_probs=211.4

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|+++.+++.||||+++.....+.....+.+|+.+++.++|+||+++++++...+...          ....+||||||+
T Consensus        60 ~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~----------~~~~~~lv~e~~  129 (371)
T 4exu_A           60 SAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR----------NFYDFYLVMPFM  129 (371)
T ss_dssp             EEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSST----------TCCCCEEEEECC
T ss_pred             EEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcc----------cceeEEEEEccc
Confidence            4788999999999999876555545677889999999999999999999998643211          122459999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccccc
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV  160 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~  160 (472)
                      .++|...+..   .+++.+++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++....    .....+
T Consensus       130 ~~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~----~~~~~~  202 (371)
T 4exu_A          130 QTDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA----EMTGYV  202 (371)
T ss_dssp             CEEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC------------CTT
T ss_pred             cccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccccccc----CcCCcc
Confidence            9988777643   489999999999999999999999999999999999999999999999999976543    233457


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCc--cccCCC
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPA--YNHFKP  238 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~  238 (472)
                      +|+.|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+.+..+++..+.+....+........  +... .
T Consensus       203 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~  281 (371)
T 4exu_A          203 VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS-L  281 (371)
T ss_dssp             CCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHH-S
T ss_pred             cCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhc-c
Confidence            799999999998756789999999999999999999999999999999999998887765544332211000  0000 0


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      ...........+..++..+++||++||..||++|||+.|+|+|+||..
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  329 (371)
T 4exu_A          282 PQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEP  329 (371)
T ss_dssp             CCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             CCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCccccc
Confidence            000112234455678999999999999999999999999999999964


No 59 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=2.5e-44  Score=366.40  Aligned_cols=270  Identities=21%  Similarity=0.274  Sum_probs=196.8

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|+++.+++.||||+++...........+.+|+.+|+.++|+|||+++++|..                .+.+|||||||
T Consensus        45 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----------------~~~~~lv~e~~  108 (389)
T 3gni_B           45 LARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA----------------DNELWVVTSFM  108 (389)
T ss_dssp             EEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE----------------TTEEEEEEECC
T ss_pred             EEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE----------------CCEEEEEEEcc
Confidence            47888999999999998765555456677889999999999999999999987                56899999999


Q ss_pred             CC-ChhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCC------
Q 012062           81 DH-DLTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDH------  152 (472)
Q Consensus        81 ~g-~l~~~~~~~-~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~------  152 (472)
                      ++ +|.+++... ...+++..++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||++.......      
T Consensus       109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~  188 (389)
T 3gni_B          109 AYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVV  188 (389)
T ss_dssp             TTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCB
T ss_pred             CCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeecccccccccc
Confidence            85 666665542 3469999999999999999999999999999999999999999999999999986543221      


Q ss_pred             CCccccccccCCCCChhhhcCC-CCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC--------CCCC
Q 012062          153 NNTLTNRVITLWYRPPELLLGA-TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSP--------DETI  223 (472)
Q Consensus       153 ~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~--------~~~~  223 (472)
                      .......++|+.|+|||++.+. ..++.++||||||||+|+|++|+.||.+.+..+.+..+.......        ....
T Consensus       189 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (389)
T 3gni_B          189 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEEL  268 (389)
T ss_dssp             CCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------------------
T ss_pred             ccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccc
Confidence            1122234779999999999864 468999999999999999999999999877766655443221110        0000


Q ss_pred             CccCCCCCcc----ccCC----CchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          224 WPGVSKMPAY----NHFK----PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       224 ~~~~~~~~~~----~~~~----~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      ..........    ....    ...............++.++++||++||+.||++|||+.|||+|+||..
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~  339 (389)
T 3gni_B          269 TMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  339 (389)
T ss_dssp             -------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGG
T ss_pred             cccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHH
Confidence            0000000000    0000    0000011122345668899999999999999999999999999999964


No 60 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=1.9e-44  Score=369.73  Aligned_cols=242  Identities=25%  Similarity=0.297  Sum_probs=201.8

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|+++.+++.||||++++.. ........+.+|+.+|+.++|||||+++++|.+                ...+||||||
T Consensus        87 ~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~----------------~~~~~lV~E~  150 (410)
T 3v8s_A           87 LVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD----------------DRYLYMVMEY  150 (410)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC----------------SSEEEEEECC
T ss_pred             EEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE----------------CCEEEEEEeC
Confidence            47889999999999997642 222334567899999999999999999999987                6689999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      |.+ +|.+++...  .+++..++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+|+.+..........
T Consensus       151 ~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~  228 (410)
T 3v8s_A          151 MPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT  228 (410)
T ss_dssp             CTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCS
T ss_pred             CCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccC
Confidence            975 677766543  58999999999999999999999999999999999999999999999999998765443333446


Q ss_pred             ccccCCCCChhhhcCCC---CCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCcccc
Q 012062          159 RVITLWYRPPELLLGAT---KYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNH  235 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~---~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  235 (472)
                      .+||+.|+|||++.+..   .++.++||||||||||+|++|+.||.+.+..+.+.+|..........             
T Consensus       229 ~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p-------------  295 (410)
T 3v8s_A          229 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFP-------------  295 (410)
T ss_dssp             CCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC-------------
T ss_pred             CcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCC-------------
Confidence            78999999999997632   17889999999999999999999999999998888886532111000             


Q ss_pred             CCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCC--CCCHHHHhcCCCCCC
Q 012062          236 FKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQ--RISAKDALDSEYFWT  286 (472)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~--R~t~~elL~h~~f~~  286 (472)
                                   ....++.++++||++||..+|.+  |++++||++|+||..
T Consensus       296 -------------~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~  335 (410)
T 3v8s_A          296 -------------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN  335 (410)
T ss_dssp             -------------TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCC
T ss_pred             -------------CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccC
Confidence                         01146789999999999999988  999999999999965


No 61 
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=3.4e-44  Score=364.91  Aligned_cols=275  Identities=30%  Similarity=0.537  Sum_probs=208.4

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCC-------------------
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQ-------------------   61 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~-------------------   61 (472)
                      +|++..|++.||||++..+...      ..+|+++|+.|+|+|||+++++|...+......                   
T Consensus        25 ~a~~~~~~~~vAiK~~~~~~~~------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (383)
T 3eb0_A           25 EVFDIESGKRFALKKVLQDPRY------KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNN   98 (383)
T ss_dssp             EEEETTTCCEEEEEEEECCTTS------CCHHHHHHTTCCCTTBCCEEEEEEEC--------------------------
T ss_pred             EEEECCCCCEEEEEEEecCcch------HHHHHHHHHHcCCCCccchhheeeecCccccccccccccccccccccccccc
Confidence            3788999999999999754322      237999999999999999999997643210000                   


Q ss_pred             ---CCCCCCCcCCeEEEEEecCCCChhhhhc---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEc-CC
Q 012062           62 ---GRPDGNKYRGSTYMVFEYMDHDLTGLAD---RPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NE  134 (472)
Q Consensus        62 ---~~~~~~~~~~~~~iVmEy~~g~l~~~~~---~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~-~~  134 (472)
                         ...........+||||||++++|.+.+.   .....+++..++.|+.||+.||+|||++||+||||||+||||+ .+
T Consensus        99 ~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~  178 (383)
T 3eb0_A           99 HHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKD  178 (383)
T ss_dssp             -----------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTT
T ss_pred             ccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCC
Confidence               0000012245689999999998666554   3455799999999999999999999999999999999999998 57


Q ss_pred             CCeEEeeccceeeeccCCCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 012062          135 GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFE  214 (472)
Q Consensus       135 ~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~  214 (472)
                      +.+||+|||+|+.+...  ......++|..|+|||++.+...++.++||||||||+|+|++|+.||.+.+..+.+..+++
T Consensus       179 ~~~kl~Dfg~a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  256 (383)
T 3eb0_A          179 NTLKLCDFGSAKKLIPS--EPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQ  256 (383)
T ss_dssp             TEEEECCCTTCEECCTT--SCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CcEEEEECCCCcccCCC--CCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence            88999999999876433  2334457899999999998766689999999999999999999999999999999999998


Q ss_pred             hcCCCCCCCCccCCCCCccccCCCchhhhhhH-HHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCC
Q 012062          215 LCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFW  285 (472)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~  285 (472)
                      .++.+....+.....  .+............+ ..+...++.++++||.+||..||++|+|+.|+|+|+||.
T Consensus       257 ~~g~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~  326 (383)
T 3eb0_A          257 IMGTPTKEQMIRMNP--HYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFD  326 (383)
T ss_dssp             HHCCCCHHHHHHHCT--TC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGH
T ss_pred             HhCCCCHHHHHHhCc--ccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHH
Confidence            888765433322111  111111111111122 223345888999999999999999999999999999993


No 62 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=1.9e-44  Score=361.81  Aligned_cols=237  Identities=26%  Similarity=0.436  Sum_probs=199.3

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEe
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFE   78 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmE   78 (472)
                      +|+++.+++.||||+++... ........+.+|+.+|+.+ +||||++++++|.+                .+.+|||||
T Consensus        35 ~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~----------------~~~~~lv~E   98 (345)
T 1xjd_A           35 LAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT----------------KENLFFVME   98 (345)
T ss_dssp             EEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC----------------SSEEEEEEE
T ss_pred             EEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe----------------CCEEEEEEe
Confidence            47888999999999998653 1223455678899999987 89999999999987                568999999


Q ss_pred             cCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccc
Q 012062           79 YMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT  157 (472)
Q Consensus        79 y~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~  157 (472)
                      |+.+ +|..++.+. ..+++.+++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+++..... .....
T Consensus        99 ~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~~~~~  176 (345)
T 1xjd_A           99 YLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG-DAKTN  176 (345)
T ss_dssp             CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-TCCBC
T ss_pred             CCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccC-CCccc
Confidence            9986 666666543 36999999999999999999999999999999999999999999999999999754322 22344


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCC
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK  237 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  237 (472)
                      ..+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.......                  
T Consensus       177 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~------------------  237 (345)
T 1xjd_A          177 TFCGTPDYIAPEILLG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY------------------  237 (345)
T ss_dssp             CCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC------------------
T ss_pred             CCCCCcccCChhhhcC-CCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCC------------------
Confidence            5688999999999987 578999999999999999999999999999888888775432111                  


Q ss_pred             CchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHH-HHhcCCCCCC
Q 012062          238 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAK-DALDSEYFWT  286 (472)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~-elL~h~~f~~  286 (472)
                                  ...++.++++||++||..||++|+++. ||++|+||..
T Consensus       238 ------------p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~  275 (345)
T 1xjd_A          238 ------------PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE  275 (345)
T ss_dssp             ------------CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred             ------------CcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccC
Confidence                        013677899999999999999999998 9999999954


No 63 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=1.7e-45  Score=368.14  Aligned_cols=238  Identities=30%  Similarity=0.488  Sum_probs=194.7

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||+++... ........+.+|+++|+.++||||+++++++..                .+.+||||||
T Consensus        27 ~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~----------------~~~~~lv~E~   90 (336)
T 3h4j_B           27 LATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT----------------PTDIVMVIEY   90 (336)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC----------------SSEEEEEECC
T ss_pred             EEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe----------------CCEEEEEEEC
Confidence            47888999999999997542 223345678899999999999999999999987                5679999999


Q ss_pred             CCCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccc
Q 012062           80 MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR  159 (472)
Q Consensus        80 ~~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~  159 (472)
                      ++++|.+++... ..+++.+++.|+.||+.||+|||++||+||||||+||||+.++++||+|||++......  ......
T Consensus        91 ~~g~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~--~~~~~~  167 (336)
T 3h4j_B           91 AGGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG--NFLKTS  167 (336)
T ss_dssp             CCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS--BTTCCC
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC--cccccc
Confidence            998888877654 36999999999999999999999999999999999999999999999999999765432  233456


Q ss_pred             cccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCc
Q 012062          160 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS  239 (472)
Q Consensus       160 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (472)
                      ++|+.|+|||++.+....+.++|||||||++|+|++|+.||.+....+.+.++               ...         
T Consensus       168 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i---------------~~~---------  223 (336)
T 3h4j_B          168 CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV---------------NSC---------  223 (336)
T ss_dssp             TTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCC---------------CSS---------
T ss_pred             cCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHH---------------HcC---------
Confidence            78999999999987544578999999999999999999999765432211100               000         


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                            .......++.++++||++||..||++|||++|+++|+||...
T Consensus       224 ------~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          224 ------VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             ------CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             ------CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence                  000112467889999999999999999999999999999653


No 64 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=3.9e-44  Score=360.31  Aligned_cols=234  Identities=26%  Similarity=0.399  Sum_probs=200.3

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|+++.+++.||||+++... ........+.+|+.+|+.++||||+++++++.+                ...+||||||
T Consensus        59 ~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----------------~~~~~lv~e~  122 (350)
T 1rdq_E           59 LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD----------------NSNLYMVMEY  122 (350)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC----------------SSEEEEEEEC
T ss_pred             EEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc----------------CCEEEEEEcC
Confidence            47888999999999997653 223345678899999999999999999999987                5689999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      +.+ +|.+++.+. ..+++.+++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+++.....    ...
T Consensus       123 ~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~----~~~  197 (350)
T 1rdq_E          123 VAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWT  197 (350)
T ss_dssp             CTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC----BCC
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC----ccc
Confidence            975 676666543 36999999999999999999999999999999999999999999999999999876432    234


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                      .++|+.|+|||++.+ ..++.++||||||||+|+|++|+.||.+.+..+.+.++.......                   
T Consensus       198 ~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~-------------------  257 (350)
T 1rdq_E          198 LCGTPEALAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-------------------  257 (350)
T ss_dssp             CEECGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-------------------
T ss_pred             ccCCccccCHHHhcC-CCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCC-------------------
Confidence            578999999999986 578999999999999999999999999999888888886532111                   


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCC-----HHHHhcCCCCCC
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRIS-----AKDALDSEYFWT  286 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t-----~~elL~h~~f~~  286 (472)
                                 ...++.++++||++||..||++|++     ++||++|+||..
T Consensus       258 -----------p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~  299 (350)
T 1rdq_E          258 -----------PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             -----------CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred             -----------CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCC
Confidence                       1246778999999999999999998     999999999953


No 65 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=2.3e-44  Score=372.07  Aligned_cols=245  Identities=22%  Similarity=0.334  Sum_probs=204.8

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|+++.+++.||||+++... ........+.+|+.+|+.++|+||++++++|.+                .+.+||||||
T Consensus        92 ~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~----------------~~~~~lV~Ey  155 (437)
T 4aw2_A           92 VVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD----------------DNNLYLVMDY  155 (437)
T ss_dssp             EEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC----------------SSEEEEEECC
T ss_pred             EEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee----------------CCEEEEEEec
Confidence            47888999999999997642 222234457899999999999999999999987                6689999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      |.+ +|.+++.+....+++..++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+|+............
T Consensus       156 ~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~  235 (437)
T 4aw2_A          156 YVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSV  235 (437)
T ss_dssp             CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCS
T ss_pred             CCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCccccc
Confidence            975 7878877756679999999999999999999999999999999999999999999999999998766544444455


Q ss_pred             ccccCCCCChhhhcC----CCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccc
Q 012062          159 RVITLWYRPPELLLG----ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYN  234 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  234 (472)
                      .+||+.|+|||++..    ...++.++||||||||+|||++|+.||.+.+..+.+.++........         ++   
T Consensus       236 ~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~---------~p---  303 (437)
T 4aw2_A          236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ---------FP---  303 (437)
T ss_dssp             CCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC---------CC---
T ss_pred             ccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccccc---------CC---
Confidence            689999999999872    35689999999999999999999999999999998888865321110         00   


Q ss_pred             cCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCC--CCCHHHHhcCCCCCC
Q 012062          235 HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQ--RISAKDALDSEYFWT  286 (472)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~--R~t~~elL~h~~f~~  286 (472)
                                   ..+..+++++++||++||..+|++  |++++|+++||||..
T Consensus       304 -------------~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~  344 (437)
T 4aw2_A          304 -------------TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSG  344 (437)
T ss_dssp             -------------SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTT
T ss_pred             -------------cccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCC
Confidence                         001236789999999999999888  999999999999954


No 66 
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=9.6e-44  Score=371.05  Aligned_cols=238  Identities=30%  Similarity=0.478  Sum_probs=201.5

Q ss_pred             CceeccCCCEEEEEEeecCCc-CCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..||+.||||+++.... .......+.+|+.+|+.++||||+++++++..                .+.+||||||
T Consensus        34 ~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~----------------~~~~~lv~E~   97 (476)
T 2y94_A           34 VGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST----------------PSDIFMVMEY   97 (476)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC----------------SSEEEEEEEC
T ss_pred             EEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE----------------CCEEEEEEeC
Confidence            478889999999999976532 22345678899999999999999999999987                5679999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      |.+ +|.+++.+ ...+++.+++.++.||+.||+|||+++|+||||||+||||+.++++||+|||++......  .....
T Consensus        98 ~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~--~~~~~  174 (476)
T 2y94_A           98 VSGGELFDYICK-NGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRT  174 (476)
T ss_dssp             CSSEEHHHHTTS-SSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT--CCBCC
T ss_pred             CCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccc--ccccc
Confidence            975 66666654 457999999999999999999999999999999999999999999999999999876432  23445


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                      .++|+.|+|||++.+....+.++||||||||+|+|++|+.||.+.+....+.++.......+                  
T Consensus       175 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p------------------  236 (476)
T 2y94_A          175 SCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP------------------  236 (476)
T ss_dssp             CCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCC------------------
T ss_pred             cCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCC------------------
Confidence            68899999999998754457899999999999999999999999888888877765321111                  


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                                  ..++.++++||++||..||++|||+.||++|+||+..
T Consensus       237 ------------~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          237 ------------QYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             ------------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             ------------ccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence                        1356789999999999999999999999999999754


No 67 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=7.4e-44  Score=357.61  Aligned_cols=237  Identities=24%  Similarity=0.394  Sum_probs=192.3

Q ss_pred             CceeccCCCEEEEEEeecCCcC-CCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEe
Q 012062            1 MAREIKTGEIVALKKIRMDNEK-EGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFE   78 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~-~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmE   78 (472)
                      +|+++.|++.||||+++..... ......+.+|+.+|+++ +||||++++++|.+                .+.+|||||
T Consensus        27 ~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~----------------~~~~~lv~e   90 (345)
T 3a8x_A           27 LVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT----------------ESRLFFVIE   90 (345)
T ss_dssp             EEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC----------------SSEEEEEEC
T ss_pred             EEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe----------------CCEEEEEEe
Confidence            4788899999999999866432 22345677899999988 89999999999987                568999999


Q ss_pred             cCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccc
Q 012062           79 YMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT  157 (472)
Q Consensus        79 y~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~  157 (472)
                      |+.+ +|..++.+. ..+++..++.|+.||+.||+|||+++|+||||||+||||+.++++||+|||+++..... .....
T Consensus        91 ~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~-~~~~~  168 (345)
T 3a8x_A           91 YVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTS  168 (345)
T ss_dssp             CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT-TCCBC
T ss_pred             CCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCC-CCccc
Confidence            9986 666665543 46999999999999999999999999999999999999999999999999999754322 22344


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCC---------ChHHHHHHHHHhcCCCCCCCCccCC
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGK---------NEAEQLSKIFELCGSPDETIWPGVS  228 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~---------~~~~~~~~i~~~~~~~~~~~~~~~~  228 (472)
                      ..++|+.|+|||++.+ ..++.++||||||||+|+|++|+.||...         +.......+......          
T Consensus       169 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~----------  237 (345)
T 3a8x_A          169 TFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR----------  237 (345)
T ss_dssp             CCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC----------
T ss_pred             ccCCCccccCccccCC-CCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC----------
Confidence            5688999999999987 57899999999999999999999999752         222233333321100          


Q ss_pred             CCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCH------HHHhcCCCCCC
Q 012062          229 KMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISA------KDALDSEYFWT  286 (472)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~------~elL~h~~f~~  286 (472)
                                          +...++.++++||++||..||++|+++      +|+++|+||..
T Consensus       238 --------------------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~  281 (345)
T 3a8x_A          238 --------------------IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  281 (345)
T ss_dssp             --------------------CCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred             --------------------CCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence                                112467889999999999999999995      89999999953


No 68 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=3e-44  Score=364.24  Aligned_cols=238  Identities=30%  Similarity=0.409  Sum_probs=201.6

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++.....  ....+.+|+++|++|+|+|||++++++..                .+.+|||||||
T Consensus       107 ~a~~~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~~~~~~~~----------------~~~~~lv~E~~  168 (373)
T 2x4f_A          107 KCEETATGLKLAAKIIKTRGMK--DKEEVKNEISVMNQLDHANLIQLYDAFES----------------KNDIVLVMEYV  168 (373)
T ss_dssp             EEEETTTCCEEEEEEEECCSHH--HHHHHHHHHHHHTTCCCTTBCCEEEEEEC----------------SSEEEEEEECC
T ss_pred             EEEEcCCCcEEEEEEEcccccc--cHHHHHHHHHHHHhCCCCCCCeEEEEEEE----------------CCEEEEEEeCC
Confidence            3678899999999999865322  24567899999999999999999999987                56899999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEE--cCCCCeEEeeccceeeeccCCCCccc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI--DNEGNLKLADFGLARSFSYDHNNTLT  157 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl--~~~~~vkL~DFG~a~~~~~~~~~~~~  157 (472)
                      ++ +|.+.+......+++.+++.|+.||+.||+|||+++|+||||||+||||  +.++.+||+|||+++.+....  ...
T Consensus       169 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~~~  246 (373)
T 2x4f_A          169 DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--KLK  246 (373)
T ss_dssp             TTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--BCC
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--ccc
Confidence            85 6777776555579999999999999999999999999999999999999  456789999999998765332  233


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCC
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK  237 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  237 (472)
                      ..++|+.|+|||++.. ..++.++||||||||||+|++|+.||.+.+..+.+..+..........               
T Consensus       247 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~---------------  310 (373)
T 2x4f_A          247 VNFGTPEFLAPEVVNY-DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDE---------------  310 (373)
T ss_dssp             CCCSSCTTCCHHHHTT-CBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSG---------------
T ss_pred             cccCCCcEeChhhccC-CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChh---------------
Confidence            4578999999999876 568899999999999999999999999999999888887654322211               


Q ss_pred             CchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCC
Q 012062          238 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFW  285 (472)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~  285 (472)
                                 .+..++.++++||.+||..||++|||+.|+|+|+||.
T Consensus       311 -----------~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~  347 (373)
T 2x4f_A          311 -----------EFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLS  347 (373)
T ss_dssp             -----------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             -----------hhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcC
Confidence                       1235678999999999999999999999999999994


No 69 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.7e-44  Score=368.86  Aligned_cols=244  Identities=25%  Similarity=0.374  Sum_probs=201.5

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|+++.|++.||||++++.. ........+.+|+.+|+.++|+||++++++|.+                .+.+||||||
T Consensus        79 ~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~----------------~~~~~lVmE~  142 (412)
T 2vd5_A           79 VVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD----------------ENYLYLVMEY  142 (412)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC----------------SSEEEEEECC
T ss_pred             EEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee----------------CCEEEEEEcC
Confidence            47888999999999997542 122234567899999999999999999999987                5689999999


Q ss_pred             CC-CChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           80 MD-HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        80 ~~-g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      |. ++|.+++.+....+++..++.|+.||+.||+|||+++|+||||||+||||+.++++||+|||+++............
T Consensus       143 ~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~  222 (412)
T 2vd5_A          143 YVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLV  222 (412)
T ss_dssp             CCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSS
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCccccce
Confidence            97 47777776654579999999999999999999999999999999999999999999999999998765443333445


Q ss_pred             ccccCCCCChhhhcC------CCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCc
Q 012062          159 RVITLWYRPPELLLG------ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPA  232 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~------~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  232 (472)
                      .+||+.|+|||++..      ...++.++||||||||+|||++|+.||.+.+..+.+.+|........         .  
T Consensus       223 ~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~---------~--  291 (412)
T 2vd5_A          223 AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLS---------L--  291 (412)
T ss_dssp             CCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC---------C--
T ss_pred             eccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcC---------C--
Confidence            689999999999873      24689999999999999999999999999999888888864211000         0  


Q ss_pred             cccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCC---CHHHHhcCCCCCC
Q 012062          233 YNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRI---SAKDALDSEYFWT  286 (472)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~---t~~elL~h~~f~~  286 (472)
                                    ......++.++++||++||. ||++|+   +++||++|+||+.
T Consensus       292 --------------p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~  333 (412)
T 2vd5_A          292 --------------PLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFG  333 (412)
T ss_dssp             --------------C----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTT
T ss_pred             --------------CccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCC
Confidence                          01113578899999999999 999984   9999999999964


No 70 
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=5.8e-44  Score=359.10  Aligned_cols=272  Identities=31%  Similarity=0.491  Sum_probs=210.4

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||++..+..   ......+|++.++.++|+||++++++|...+..         ......+||||||+
T Consensus        41 ~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~---------~~~~~~~~lv~e~~  108 (360)
T 3e3p_A           41 LGKEKSTGMSVAIKKVIQDPR---FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER---------DRRDIYLNVVMEYV  108 (360)
T ss_dssp             EEEETTTCCEEEEEEEECCTT---CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS---------CTTCEEEEEEEECC
T ss_pred             EEEECCCCCEEEEEEEecCcc---ccHHHHHHHHHHHhcCCCCcccHHHhhhccccc---------cccceeEEEEeecc
Confidence            467889999999999975432   334667889999999999999999999763311         11133589999999


Q ss_pred             CCChhhhhc---CCCCCCCHHHHHHHHHHHHHHHHHHH--HCCccccCCCCCcEEEcC-CCCeEEeeccceeeeccCCCC
Q 012062           81 DHDLTGLAD---RPGLRFTVPQIKCYMKQLLTGLHYCH--VNQVLHRDIKGSNLLIDN-EGNLKLADFGLARSFSYDHNN  154 (472)
Q Consensus        81 ~g~l~~~~~---~~~~~l~~~~i~~i~~Qll~aL~~LH--~~giiHrDLKp~NILl~~-~~~vkL~DFG~a~~~~~~~~~  154 (472)
                      ++++...+.   .....+++..++.++.||+.||.|||  +++|+||||||+||||+. ++.+||+|||+++.+....  
T Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~--  186 (360)
T 3e3p_A          109 PDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE--  186 (360)
T ss_dssp             SCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTS--
T ss_pred             cccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCC--
Confidence            998765443   34556899999999999999999999  999999999999999996 8899999999998765322  


Q ss_pred             ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccc
Q 012062          155 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYN  234 (472)
Q Consensus       155 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  234 (472)
                      .....++|+.|+|||++.+...++.++||||||||+|+|++|+.||.+.+..+.+..+.+..+.+....|..........
T Consensus       187 ~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (360)
T 3e3p_A          187 PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDV  266 (360)
T ss_dssp             CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCG
T ss_pred             CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhc
Confidence            33445789999999999776668999999999999999999999999999999999999887776654443322111000


Q ss_pred             cCCCchhhhhhHHHHh----hhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCCC
Q 012062          235 HFKPSRTMKRRVREVF----RHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDP  288 (472)
Q Consensus       235 ~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~~  288 (472)
                      .+..  .....+...+    ..++.++++||.+||+.||++|||+.|||+|+||....
T Consensus       267 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          267 DLYN--SKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH  322 (360)
T ss_dssp             GGGC--CCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred             cccc--cccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence            0000  0001112222    23678899999999999999999999999999996543


No 71 
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=5.4e-44  Score=369.00  Aligned_cols=262  Identities=31%  Similarity=0.548  Sum_probs=207.7

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc------CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEE
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKL------QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTY   74 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l------~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (472)
                      +|++..+++.||||+++...   .....+.+|+++++.+      +|+||+++++++..                .+.+|
T Consensus       115 ~a~~~~~~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~----------------~~~~~  175 (429)
T 3kvw_A          115 KAYDHKVHQHVALKMVRNEK---RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF----------------RNHIC  175 (429)
T ss_dssp             EEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE----------------TTEEE
T ss_pred             EEEECCCCcEEEEEEECCcc---chHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc----------------CCeEE
Confidence            46788999999999997532   2345677899998887      57799999999987                66899


Q ss_pred             EEEecCCCChhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCC--eEEeeccceeeeccC
Q 012062           75 MVFEYMDHDLTGLADRPG-LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN--LKLADFGLARSFSYD  151 (472)
Q Consensus        75 iVmEy~~g~l~~~~~~~~-~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~--vkL~DFG~a~~~~~~  151 (472)
                      |||||++++|.+++.... ..+++..++.|+.||+.||+|||+++|+||||||+||||+.++.  +||+|||+++.... 
T Consensus       176 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~-  254 (429)
T 3kvw_A          176 MTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ-  254 (429)
T ss_dssp             EEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC-
T ss_pred             EEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCC-
Confidence            999999999988777543 35999999999999999999999999999999999999999887  99999999976432 


Q ss_pred             CCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCC
Q 012062          152 HNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMP  231 (472)
Q Consensus       152 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  231 (472)
                         .....++|+.|+|||++.+ ..++.++||||||||||+|++|+.||.+.++.+.+..+++..+.+....+.......
T Consensus       255 ---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~  330 (429)
T 3kvw_A          255 ---RVYTYIQSRFYRAPEVILG-ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAK  330 (429)
T ss_dssp             ---CCCSSCSCGGGCCHHHHHT-BCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHH
T ss_pred             ---cccccCCCCCccChHHHhC-CCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhh
Confidence               2334578999999999987 568999999999999999999999999999999999999888776654332221100


Q ss_pred             cccc------C------C----------------CchhhhhhH-HHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCC
Q 012062          232 AYNH------F------K----------------PSRTMKRRV-REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSE  282 (472)
Q Consensus       232 ~~~~------~------~----------------~~~~~~~~~-~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~  282 (472)
                      .+..      +      .                ........+ ..+....+..+++||++||..||++|||++|||+||
T Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hp  410 (429)
T 3kvw_A          331 NFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHP  410 (429)
T ss_dssp             HHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTST
T ss_pred             hccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCCh
Confidence            0000      0      0                000001111 222234578899999999999999999999999999


Q ss_pred             CCCC
Q 012062          283 YFWT  286 (472)
Q Consensus       283 ~f~~  286 (472)
                      ||+.
T Consensus       411 w~~~  414 (429)
T 3kvw_A          411 WLRR  414 (429)
T ss_dssp             TTC-
T ss_pred             hhcc
Confidence            9964


No 72 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=6.1e-44  Score=359.28  Aligned_cols=237  Identities=24%  Similarity=0.427  Sum_probs=199.8

Q ss_pred             CceeccCCCEEEEEEeecCCc-CCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEe
Q 012062            1 MAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFE   78 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmE   78 (472)
                      +|+++.+++.||||+++.... .......+.+|+.+|+.+ +|+||++++++|..                .+.+|||||
T Consensus        38 ~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~----------------~~~~~lv~E  101 (353)
T 2i0e_A           38 LSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT----------------MDRLYFVME  101 (353)
T ss_dssp             EEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC----------------SSEEEEEEE
T ss_pred             EEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc----------------CCEEEEEEe
Confidence            478888999999999986531 233456778999999988 79999999999987                568999999


Q ss_pred             cCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccc
Q 012062           79 YMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT  157 (472)
Q Consensus        79 y~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~  157 (472)
                      |+.+ +|..++.+. ..+++.+++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+++..... .....
T Consensus       102 ~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~~~~~  179 (353)
T 2i0e_A          102 YVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD-GVTTK  179 (353)
T ss_dssp             CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-TCCBC
T ss_pred             CCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccC-Ccccc
Confidence            9986 666666543 36999999999999999999999999999999999999999999999999999754322 22344


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCC
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK  237 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  237 (472)
                      ..+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+.++.......                  
T Consensus       180 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~------------------  240 (353)
T 2i0e_A          180 TFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY------------------  240 (353)
T ss_dssp             CCCSCGGGCCHHHHTT-CCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC------------------
T ss_pred             cccCCccccChhhhcC-CCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCC------------------
Confidence            5688999999999976 578999999999999999999999999999888888886532111                  


Q ss_pred             CchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCC-----CHHHHhcCCCCCC
Q 012062          238 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRI-----SAKDALDSEYFWT  286 (472)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~-----t~~elL~h~~f~~  286 (472)
                                  ...++.++++||++||..||++|+     +++||++|+||..
T Consensus       241 ------------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~  282 (353)
T 2i0e_A          241 ------------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY  282 (353)
T ss_dssp             ------------CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred             ------------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence                        124678899999999999999999     4799999999954


No 73 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=5.3e-43  Score=347.70  Aligned_cols=238  Identities=26%  Similarity=0.464  Sum_probs=198.5

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+|+.||||+++.....  ....+.+|+.++++++|+||+++++++..                .+.+||||||+
T Consensus        63 ~a~~~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~----------------~~~~~lv~e~~  124 (321)
T 2c30_A           63 LAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHFNVVEMYKSYLV----------------GEELWVLMEFL  124 (321)
T ss_dssp             EEEETTTCCEEEEEEEETTTCC--SHHHHHHHHHHHTTCCCTTBCCEEEEEEE----------------TTEEEEEECCC
T ss_pred             EEEECCCCcEEEEEEEeccchh--HHHHHHHHHHHHHhCCCCCcceEEEEEEE----------------CCEEEEEEecC
Confidence            3678889999999999865432  35568899999999999999999999987                56799999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR  159 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~  159 (472)
                      ++ +|.+++..  ..+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||++....... ......
T Consensus       125 ~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~~  201 (321)
T 2c30_A          125 QGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKSL  201 (321)
T ss_dssp             CSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CCBCCC
T ss_pred             CCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCc-cccccc
Confidence            86 55555543  359999999999999999999999999999999999999999999999999998765432 223456


Q ss_pred             cccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCc
Q 012062          160 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS  239 (472)
Q Consensus       160 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (472)
                      ++|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+.+..+........                   
T Consensus       202 ~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-------------------  261 (321)
T 2c30_A          202 VGTPYWMAPEVISR-SLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKL-------------------  261 (321)
T ss_dssp             CSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCC-------------------
T ss_pred             cCCccccCHhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCc-------------------
Confidence            78999999999976 5789999999999999999999999999888777776654321100                   


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                              .....++..+++||.+||..||++|||+.|+|+|+||...
T Consensus       262 --------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  301 (321)
T 2c30_A          262 --------KNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT  301 (321)
T ss_dssp             --------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred             --------CccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence                    0012467789999999999999999999999999999653


No 74 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=6.4e-43  Score=351.29  Aligned_cols=237  Identities=29%  Similarity=0.405  Sum_probs=180.2

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++....    ...+.+|+++|++|+|+||+++++++..                .+.+||||||+
T Consensus        71 ~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~----------------~~~~~lv~e~~  130 (349)
T 2w4o_A           71 RCKQKGTQKPYALKVLKKTVD----KKIVRTEIGVLLRLSHPNIIKLKEIFET----------------PTEISLVLELV  130 (349)
T ss_dssp             EEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEEC----------------SSEEEEEECCC
T ss_pred             EEEECCCCcEEEEEEeccchh----HHHHHHHHHHHHhCCCCCCcceeeeEec----------------CCeEEEEEEeC
Confidence            367888999999999986532    2356789999999999999999999986                56799999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcC---CCCeEEeeccceeeeccCCCCcc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN---EGNLKLADFGLARSFSYDHNNTL  156 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~---~~~vkL~DFG~a~~~~~~~~~~~  156 (472)
                      .+ +|.+.+... ..+++.+++.++.||+.||+|||+++|+||||||+||||+.   ++.+||+|||+++.....  ...
T Consensus       131 ~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~--~~~  207 (349)
T 2w4o_A          131 TGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ--VLM  207 (349)
T ss_dssp             CSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------------
T ss_pred             CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc--ccc
Confidence            85 666666543 46999999999999999999999999999999999999975   788999999999765432  223


Q ss_pred             ccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHH-HHHHHHHhcCCCCCCCCccCCCCCcccc
Q 012062          157 TNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE-QLSKIFELCGSPDETIWPGVSKMPAYNH  235 (472)
Q Consensus       157 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~  235 (472)
                      ...++|+.|+|||++.+ ..++.++||||||||+|+|++|..||...+..+ .+..+..........             
T Consensus       208 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~-------------  273 (349)
T 2w4o_A          208 KTVCGTPGYCAPEILRG-CAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISP-------------  273 (349)
T ss_dssp             -----CGGGSCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTT-------------
T ss_pred             ccccCCCCccCHHHhcC-CCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCc-------------
Confidence            34578999999999986 568999999999999999999999998776554 445554332211111             


Q ss_pred             CCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          236 FKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                                   .+..++.++++||++||..||++|||+.|+|+|+||...
T Consensus       274 -------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  312 (349)
T 2w4o_A          274 -------------WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGK  312 (349)
T ss_dssp             -------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTST
T ss_pred             -------------hhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence                         123467789999999999999999999999999999653


No 75 
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=2.7e-43  Score=349.24  Aligned_cols=268  Identities=40%  Similarity=0.728  Sum_probs=215.7

Q ss_pred             ceec-cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc---CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEE
Q 012062            2 AREI-KTGEIVALKKIRMDNEKEGFPITAIREIKILKKL---QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVF   77 (472)
Q Consensus         2 a~~~-~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l---~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVm   77 (472)
                      |++. .+++.||||+++...........+.+|+.+++.+   +|+||+++++++.....           .....+||||
T Consensus        30 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~-----------~~~~~~~lv~   98 (326)
T 1blx_A           30 ARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT-----------DRETKLTLVF   98 (326)
T ss_dssp             EEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC-----------SSEEEEEEEE
T ss_pred             EEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc-----------CCCceEEEEE
Confidence            5664 6789999999986654444455677888888877   89999999999873210           1155789999


Q ss_pred             ecCCCChhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcc
Q 012062           78 EYMDHDLTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTL  156 (472)
Q Consensus        78 Ey~~g~l~~~~~~~-~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~  156 (472)
                      ||++++|.+++... ...+++.+++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++.....  ...
T Consensus        99 e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~  176 (326)
T 1blx_A           99 EHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MAL  176 (326)
T ss_dssp             ECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGG--GGG
T ss_pred             ecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccCC--CCc
Confidence            99999888877653 335899999999999999999999999999999999999999999999999999765432  233


Q ss_pred             ccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccC
Q 012062          157 TNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF  236 (472)
Q Consensus       157 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  236 (472)
                      ....+|..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.+..+.+....|+.....+.....
T Consensus       177 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  255 (326)
T 1blx_A          177 TSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFH  255 (326)
T ss_dssp             CCCCCCCTTCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSC
T ss_pred             cccccccceeCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhc
Confidence            44578999999999986 56899999999999999999999999999999999999988888777777654433321111


Q ss_pred             CCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          237 KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      ..   .......+...++..+++||.+||..||++|||+.|+|+|+||..
T Consensus       256 ~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  302 (326)
T 1blx_A          256 SK---SAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD  302 (326)
T ss_dssp             CC---CCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred             cc---CcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccc
Confidence            10   011233445678899999999999999999999999999999964


No 76 
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=2.3e-43  Score=353.76  Aligned_cols=274  Identities=35%  Similarity=0.589  Sum_probs=211.7

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++... .......+.+|+++|++++|+||+++++++.....           .....+||||||+
T Consensus        29 ~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-----------~~~~~~~lv~e~~   96 (353)
T 2b9h_A           29 SATHKPTGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKHENIITIFNIQRPDSF-----------ENFNEVYIIQELM   96 (353)
T ss_dssp             EEEETTTTEEEEEEEECCCS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCS-----------TTCCCEEEEECCC
T ss_pred             EEEECCCCcEEEEEeecccc-cchHHHHHHHHHHHHHhCcCCCcCCeeeeeccccc-----------CccceEEEEEecc
Confidence            36788899999999996432 22234567799999999999999999999875321           1245789999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC------
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN------  154 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~------  154 (472)
                      .++|..++...  .+++.+++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++.+......      
T Consensus        97 ~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  174 (353)
T 2b9h_A           97 QTDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG  174 (353)
T ss_dssp             SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC-----------
T ss_pred             CccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccc
Confidence            99888877653  5899999999999999999999999999999999999999999999999999876532211      


Q ss_pred             ---ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCC
Q 012062          155 ---TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMP  231 (472)
Q Consensus       155 ---~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  231 (472)
                         .....++|..|+|||++.....++.++|||||||++|+|++|+.||.+.+..+.+..++...+.+............
T Consensus       175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (353)
T 2b9h_A          175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESP  254 (353)
T ss_dssp             -----CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCH
T ss_pred             cccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccc
Confidence               12335789999999998765678999999999999999999999999999999999998887766532211111000


Q ss_pred             ccccC--CCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCCC
Q 012062          232 AYNHF--KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDP  288 (472)
Q Consensus       232 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~~  288 (472)
                      ....+  .............+..++.++++||++||..||++|||+.|||+|+||....
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (353)
T 2b9h_A          255 RAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH  313 (353)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             hhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence            00000  0000001123445567899999999999999999999999999999996543


No 77 
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=1.9e-43  Score=356.01  Aligned_cols=272  Identities=31%  Similarity=0.486  Sum_probs=206.1

Q ss_pred             ceeccCCCEEEEEEeecCCcCCC---------chhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCe
Q 012062            2 AREIKTGEIVALKKIRMDNEKEG---------FPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGS   72 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~~~~---------~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (472)
                      |++. +++.||||++........         ....+.+|+++|++++|+||+++++++.....           .....
T Consensus        41 ~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-----------~~~~~  108 (362)
T 3pg1_A           41 GVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEE-----------PAMHK  108 (362)
T ss_dssp             EECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCT-----------TTCCE
T ss_pred             EECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccC-----------CCcce
Confidence            4454 489999999976533221         12567899999999999999999999875321           11457


Q ss_pred             EEEEEecCCCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCC
Q 012062           73 TYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDH  152 (472)
Q Consensus        73 ~~iVmEy~~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~  152 (472)
                      +||||||++++|.+.+......+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||++...... 
T Consensus       109 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-  187 (362)
T 3pg1_A          109 LYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD-  187 (362)
T ss_dssp             EEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC--------
T ss_pred             EEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCcccccccc-
Confidence            8999999999999988877777999999999999999999999999999999999999999999999999999754332 


Q ss_pred             CCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCC--
Q 012062          153 NNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM--  230 (472)
Q Consensus       153 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--  230 (472)
                       ......++|..|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+.+..+.+..+.+....+......  
T Consensus       188 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  266 (362)
T 3pg1_A          188 -ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSA  266 (362)
T ss_dssp             ---------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHH
T ss_pred             -cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhh
Confidence             22334577999999999987567899999999999999999999999999999999999887776543222111100  


Q ss_pred             CccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          231 PAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                      ..+...................++..+.+||.+||..||++|||+.|+|+|+||...
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  323 (362)
T 3pg1_A          267 RDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL  323 (362)
T ss_dssp             HHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             hHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhc
Confidence            000000000011223445556788999999999999999999999999999999653


No 78 
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=1.1e-43  Score=357.43  Aligned_cols=261  Identities=24%  Similarity=0.362  Sum_probs=204.0

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcC-----CCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEE
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ-----HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYM   75 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~-----hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i   75 (472)
                      +|++..+++.||||+++...   .....+.+|+.+++.+.     |+||+++++++..                .+.+||
T Consensus        53 ~~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~----------------~~~~~l  113 (360)
T 3llt_A           53 LCQHIDNKKYYAVKVVRNIK---KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY----------------YDHMCL  113 (360)
T ss_dssp             EEEETTTCCEEEEEEECSCH---HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE----------------TTEEEE
T ss_pred             EEEECCCCeEEEEEEeccch---hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE----------------CCeeEE
Confidence            47888999999999997432   23446678999999997     9999999999987                568999


Q ss_pred             EEecCCCChhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcC---------------------
Q 012062           76 VFEYMDHDLTGLADRPG-LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN---------------------  133 (472)
Q Consensus        76 VmEy~~g~l~~~~~~~~-~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~---------------------  133 (472)
                      ||||+.++|.+++.+.. ..+++.+++.|+.||+.||+|||+++|+||||||+||||+.                     
T Consensus       114 v~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~  193 (360)
T 3llt_A          114 IFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQI  193 (360)
T ss_dssp             EECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEE
T ss_pred             EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccc
Confidence            99999888888776543 35999999999999999999999999999999999999975                     


Q ss_pred             ----CCCeEEeeccceeeeccCCCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHH
Q 012062          134 ----EGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL  209 (472)
Q Consensus       134 ----~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~  209 (472)
                          ++.+||+|||+++....    .....++|+.|+|||++.+ ..++.++||||||||+|+|++|+.||...+..+.+
T Consensus       194 ~~~~~~~~kl~DFG~a~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  268 (360)
T 3llt_A          194 YRTKSTGIKLIDFGCATFKSD----YHGSIINTRQYRAPEVILN-LGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHL  268 (360)
T ss_dssp             EEESCCCEEECCCTTCEETTS----CCCSCCSCGGGCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             cccCCCCEEEEeccCceecCC----CCcCccCcccccCcHHHcC-CCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHH
Confidence                77899999999976432    2234578999999999987 57899999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCCCccCCCCCc--------c-ccCCCchhhh-------hhHHHHhhhccHHHHHHHHHhhccCCCCCC
Q 012062          210 SKIFELCGSPDETIWPGVSKMPA--------Y-NHFKPSRTMK-------RRVREVFRHFDRHALELLEKMLMLDPSQRI  273 (472)
Q Consensus       210 ~~i~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~~~-------~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~  273 (472)
                      ..+.......+...+........        . ..+.......       ..........++.+.+||++||+.||++||
T Consensus       269 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp  348 (360)
T 3llt_A          269 AMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRP  348 (360)
T ss_dssp             HHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSC
T ss_pred             HHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCC
Confidence            88888776655332221111000        0 0000000000       011111223457889999999999999999


Q ss_pred             CHHHHhcCCCCC
Q 012062          274 SAKDALDSEYFW  285 (472)
Q Consensus       274 t~~elL~h~~f~  285 (472)
                      |+.|||+|+||+
T Consensus       349 ta~elL~hp~f~  360 (360)
T 3llt_A          349 SPAELLKHKFLE  360 (360)
T ss_dssp             CHHHHTTSGGGC
T ss_pred             CHHHHhcCcccC
Confidence            999999999983


No 79 
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=9.8e-44  Score=363.05  Aligned_cols=264  Identities=33%  Similarity=0.547  Sum_probs=204.6

Q ss_pred             ceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCC
Q 012062            2 AREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD   81 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~   81 (472)
                      |++..+++ ||+|++..+...      ..+|+++|+.++|+||++++++|...+..          .....+||||||+.
T Consensus        59 a~~~~~~~-~aikk~~~~~~~------~~~E~~il~~l~h~niv~l~~~~~~~~~~----------~~~~~~~lv~e~~~  121 (394)
T 4e7w_A           59 AKLVESDE-VAIKKVLQDKRF------KNRELQIMRIVKHPNVVDLKAFFYSNGDK----------KDEVFLNLVLEYVP  121 (394)
T ss_dssp             EEETTTEE-EEEEEEECCTTS------CCHHHHHHHTCCCTTBCCEEEEEEEESSS----------SSCEEEEEEEECCS
T ss_pred             EEECCCCe-EEEEEEecCcch------HHHHHHHHHhCCCCCcceEEEEEEecCCC----------CCceEEEEEeeccC
Confidence            56666666 888888644321      13799999999999999999999763311          11345889999999


Q ss_pred             CChhhhhc---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEc-CCCCeEEeeccceeeeccCCCCccc
Q 012062           82 HDLTGLAD---RPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLT  157 (472)
Q Consensus        82 g~l~~~~~---~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~-~~~~vkL~DFG~a~~~~~~~~~~~~  157 (472)
                      ++++..+.   .....+++..++.|+.||+.||+|||++||+||||||+||||+ .++.+||+|||+|+.+...  ....
T Consensus       122 ~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~--~~~~  199 (394)
T 4e7w_A          122 ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG--EPNV  199 (394)
T ss_dssp             EEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT--CCCC
T ss_pred             ccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC--CCCc
Confidence            87765443   2345699999999999999999999999999999999999999 7889999999999876432  2334


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCC
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK  237 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  237 (472)
                      ..++|+.|+|||++.+...++.++||||||||+|+|++|+.||.+.+..+++..+++..+.+....+.....  .+....
T Consensus       200 ~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~--~~~~~~  277 (394)
T 4e7w_A          200 SYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP--NYMEHK  277 (394)
T ss_dssp             SSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCG--GGSSSC
T ss_pred             ccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh--hhhhhc
Confidence            567899999999998766789999999999999999999999999999999999998887765433322111  111111


Q ss_pred             CchhhhhhHHH-HhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          238 PSRTMKRRVRE-VFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       238 ~~~~~~~~~~~-~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      ........+.. +...++.++++||.+||..||++|+|+.|+|+|+||..
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (394)
T 4e7w_A          278 FPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE  327 (394)
T ss_dssp             CCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGST
T ss_pred             cccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhh
Confidence            11111112222 23458899999999999999999999999999999964


No 80 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=2.5e-43  Score=350.93  Aligned_cols=233  Identities=25%  Similarity=0.421  Sum_probs=185.9

Q ss_pred             ccCCCEEEEEEeecCCc--CCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC
Q 012062            5 IKTGEIVALKKIRMDNE--KEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH   82 (472)
Q Consensus         5 ~~tg~~vAlK~i~~~~~--~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g   82 (472)
                      ..+++.||||+++....  .......+.+|+.+|+.++|+||+++++++..                .+.+||||||+++
T Consensus        42 ~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----------------~~~~~lv~e~~~~  105 (327)
T 3a62_A           42 ANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT----------------GGKLYLILEYLSG  105 (327)
T ss_dssp             TTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC----------------SSCEEEEEECCTT
T ss_pred             CCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc----------------CCEEEEEEeCCCC
Confidence            37999999999986532  12234456789999999999999999999987                5679999999985


Q ss_pred             -ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccccc
Q 012062           83 -DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI  161 (472)
Q Consensus        83 -~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g  161 (472)
                       +|..++.+. ..+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++...... ......++
T Consensus       106 ~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~g  183 (327)
T 3a62_A          106 GELFMQLERE-GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG-TVTHTFCG  183 (327)
T ss_dssp             EEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-----------CTTSS
T ss_pred             CcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCC-ccccccCC
Confidence             666666543 368999999999999999999999999999999999999999999999999987543222 22344578


Q ss_pred             cCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchh
Q 012062          162 TLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRT  241 (472)
Q Consensus       162 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (472)
                      |+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+.++.+.....+                     
T Consensus       184 t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p---------------------  241 (327)
T 3a62_A          184 TIEYMAPEILMR-SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP---------------------  241 (327)
T ss_dssp             CCTTSCHHHHTT-SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC---------------------
T ss_pred             CcCccCHhhCcC-CCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC---------------------
Confidence            999999999976 5689999999999999999999999999998888888765422111                     


Q ss_pred             hhhhHHHHhhhccHHHHHHHHHhhccCCCCCC-----CHHHHhcCCCCCC
Q 012062          242 MKRRVREVFRHFDRHALELLEKMLMLDPSQRI-----SAKDALDSEYFWT  286 (472)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~-----t~~elL~h~~f~~  286 (472)
                               ..++.++++||.+||..||++|+     ++.|+++|+||..
T Consensus       242 ---------~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~  282 (327)
T 3a62_A          242 ---------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH  282 (327)
T ss_dssp             ---------TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSS
T ss_pred             ---------CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccC
Confidence                     13677899999999999999999     8999999999954


No 81 
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=7.5e-43  Score=346.14  Aligned_cols=240  Identities=27%  Similarity=0.429  Sum_probs=201.8

Q ss_pred             CceeccCCCEEEEEEeecCCcCC----CchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEE
Q 012062            1 MAREIKTGEIVALKKIRMDNEKE----GFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMV   76 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~----~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iV   76 (472)
                      +|++..+++.||||+++......    .....+.+|+.+|++++|+||+++++++..                ...+|||
T Consensus        30 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----------------~~~~~lv   93 (321)
T 2a2a_A           30 KCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN----------------RTDVVLI   93 (321)
T ss_dssp             EEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC----------------SSEEEEE
T ss_pred             EEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec----------------CCEEEEE
Confidence            37788999999999998664332    134568899999999999999999999986                5689999


Q ss_pred             EecCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCC----CeEEeeccceeeeccC
Q 012062           77 FEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG----NLKLADFGLARSFSYD  151 (472)
Q Consensus        77 mEy~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~----~vkL~DFG~a~~~~~~  151 (472)
                      |||+.+ +|.+++.. ...+++..++.++.||+.||+|||+++|+||||||+||||+.++    .+||+|||++......
T Consensus        94 ~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~  172 (321)
T 2a2a_A           94 LELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG  172 (321)
T ss_dssp             ECCCCSCBHHHHHHT-CSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTT
T ss_pred             EEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCcc
Confidence            999975 67666654 34689999999999999999999999999999999999999887    7999999999876532


Q ss_pred             CCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCC
Q 012062          152 HNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMP  231 (472)
Q Consensus       152 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  231 (472)
                        .......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+.......+           
T Consensus       173 --~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~-----------  238 (321)
T 2a2a_A          173 --VEFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD-----------  238 (321)
T ss_dssp             --CCCCCCCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCC-----------
T ss_pred             --ccccccCCCCCccCcccccC-CCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccC-----------
Confidence              22344578999999999876 5789999999999999999999999999988888877754322111           


Q ss_pred             ccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          232 AYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                     ...+..++..+++||++||..||++|||+.|+|+|+||..
T Consensus       239 ---------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~  278 (321)
T 2a2a_A          239 ---------------EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP  278 (321)
T ss_dssp             ---------------HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSC
T ss_pred             ---------------hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccC
Confidence                           1234567889999999999999999999999999999953


No 82 
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=1e-43  Score=360.12  Aligned_cols=237  Identities=26%  Similarity=0.395  Sum_probs=190.6

Q ss_pred             CceeccCCCEEEEEEeecCCc-CCCchhhHHHHHHH-HHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEe
Q 012062            1 MAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKI-LKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFE   78 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~-~~~~~~~~~~Ei~i-l~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmE   78 (472)
                      +|+++.+++.||||++++... .......+++|..+ ++.++||||++++++|.+                .+.+|||||
T Consensus        56 ~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~----------------~~~~~lv~E  119 (373)
T 2r5t_A           56 LARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT----------------ADKLYFVLD  119 (373)
T ss_dssp             EEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC----------------SSEEEEEEE
T ss_pred             EEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe----------------CCEEEEEEe
Confidence            478899999999999986642 22334456678777 577899999999999987                568999999


Q ss_pred             cCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccc
Q 012062           79 YMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT  157 (472)
Q Consensus        79 y~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~  157 (472)
                      |+.+ +|..++.+ ...+++..++.|+.||+.||+|||++||+||||||+||||+.++++||+|||+++..... .....
T Consensus       120 ~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~-~~~~~  197 (373)
T 2r5t_A          120 YINGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH-NSTTS  197 (373)
T ss_dssp             CCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC-CCCCC
T ss_pred             CCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccC-CCccc
Confidence            9986 56666554 346899999999999999999999999999999999999999999999999999753322 22344


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCC
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK  237 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  237 (472)
                      ..+||+.|+|||++.+ ..++.++||||||||+|+|++|..||.+.+..+.+.++.......                  
T Consensus       198 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~------------------  258 (373)
T 2r5t_A          198 TFCGTPEYLAPEVLHK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL------------------  258 (373)
T ss_dssp             SBSCCCCCCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCC------------------
T ss_pred             cccCCccccCHHHhCC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC------------------
Confidence            5689999999999986 678999999999999999999999999999988888886532111                  


Q ss_pred             CchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCH----HHHhcCCCCCC
Q 012062          238 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISA----KDALDSEYFWT  286 (472)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~----~elL~h~~f~~  286 (472)
                                  ...++.++++||++||..||++|+++    .|+++|+||..
T Consensus       259 ------------~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~  299 (373)
T 2r5t_A          259 ------------KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSL  299 (373)
T ss_dssp             ------------CSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred             ------------CCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccC
Confidence                        12467789999999999999999986    69999999954


No 83 
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=1.2e-43  Score=350.53  Aligned_cols=235  Identities=23%  Similarity=0.283  Sum_probs=189.8

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||++.............+.|+..+.++ +|+||+++++++..                .+.+||||||
T Consensus        75 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~----------------~~~~~lv~e~  138 (311)
T 3p1a_A           75 KVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE----------------GGILYLQTEL  138 (311)
T ss_dssp             EEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE----------------TTEEEEEEEC
T ss_pred             EEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe----------------CCEEEEEEec
Confidence            367889999999999876544433344556677666655 89999999999986                6689999999


Q ss_pred             CCCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccc
Q 012062           80 MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR  159 (472)
Q Consensus        80 ~~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~  159 (472)
                      +.++|..++......+++..++.|+.||+.||+|||+++|+||||||+||||+.++++||+|||++.......  .....
T Consensus       139 ~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~--~~~~~  216 (311)
T 3p1a_A          139 CGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG--AGEVQ  216 (311)
T ss_dssp             CCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC--------CC
T ss_pred             cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC--CCccc
Confidence            9999988887766679999999999999999999999999999999999999999999999999997764322  23345


Q ss_pred             cccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCc
Q 012062          160 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS  239 (472)
Q Consensus       160 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (472)
                      .+|+.|+|||++.+  .++.++|||||||++|+|++|..+|...+...   .+....                       
T Consensus       217 ~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~~~~~~~~~~---~~~~~~-----------------------  268 (311)
T 3p1a_A          217 EGDPRYMAPELLQG--SYGTAADVFSLGLTILEVACNMELPHGGEGWQ---QLRQGY-----------------------  268 (311)
T ss_dssp             CCCGGGCCGGGGGT--CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH---HHTTTC-----------------------
T ss_pred             CCCccccCHhHhcC--CCCchhhHHHHHHHHHHHHhCCCCCCCccHHH---HHhccC-----------------------
Confidence            68999999999875  58999999999999999999987766543322   221100                       


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                           ........++.++.+||.+||..||++|||++|||+||||+.
T Consensus       269 -----~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          269 -----LPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             -----CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             -----CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence                 011334567889999999999999999999999999999953


No 84 
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=1.5e-43  Score=355.77  Aligned_cols=237  Identities=26%  Similarity=0.415  Sum_probs=199.6

Q ss_pred             CceeccCCCEEEEEEeecCCcC-CCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEK-EGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||+++..... ......+.+|+++|++++|+|||++++++..                .+.+||||||
T Consensus        72 ~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----------------~~~~~lv~e~  135 (348)
T 1u5q_A           72 FARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR----------------EHTAWLVMEY  135 (348)
T ss_dssp             EEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE----------------TTEEEEEEEC
T ss_pred             EEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE----------------CCeEEEEEec
Confidence            3678899999999999865322 2234567899999999999999999999986                5689999999


Q ss_pred             CCCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccc
Q 012062           80 MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR  159 (472)
Q Consensus        80 ~~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~  159 (472)
                      +.+++.+++......+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||++.....     ....
T Consensus       136 ~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-----~~~~  210 (348)
T 1u5q_A          136 CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-----ANSF  210 (348)
T ss_dssp             CSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-----BCCC
T ss_pred             CCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC-----CCcc
Confidence            99988887765556799999999999999999999999999999999999999999999999999976532     2345


Q ss_pred             cccCCCCChhhhcC--CCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCC
Q 012062          160 VITLWYRPPELLLG--ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK  237 (472)
Q Consensus       160 ~gt~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  237 (472)
                      ++|+.|+|||++.+  ...++.++||||||||+|+|++|+.||...+..+.+..+.........                
T Consensus       211 ~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------  274 (348)
T 1u5q_A          211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ----------------  274 (348)
T ss_dssp             CSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCC----------------
T ss_pred             cCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC----------------
Confidence            78999999999863  356889999999999999999999999998887777766543211000                


Q ss_pred             CchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          238 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                  ...+++.+++||.+||..||++|||++++|+|+||..
T Consensus       275 ------------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~  311 (348)
T 1u5q_A          275 ------------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  311 (348)
T ss_dssp             ------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred             ------------CCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhc
Confidence                        0135678999999999999999999999999999965


No 85 
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=2.1e-43  Score=353.96  Aligned_cols=235  Identities=28%  Similarity=0.405  Sum_probs=191.4

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|+++.|++.||||+++....      ...+|+++|.++ +||||+++++++.+                ...+||||||
T Consensus        40 ~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~----------------~~~~~lv~E~   97 (342)
T 2qr7_A           40 RCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDD----------------GKYVYVVTEL   97 (342)
T ss_dssp             EEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEEC----------------SSEEEEEECC
T ss_pred             EEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEc----------------CCEEEEEEeC
Confidence            478889999999999976532      235799999888 79999999999986                5689999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCC-C---CeEEeeccceeeeccCCCC
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE-G---NLKLADFGLARSFSYDHNN  154 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~-~---~vkL~DFG~a~~~~~~~~~  154 (472)
                      |.+ +|.+.+.+. ..+++.+++.|+.||+.||+|||++||+||||||+||||.++ +   .+||+|||+++.+.... .
T Consensus        98 ~~gg~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~-~  175 (342)
T 2qr7_A           98 MKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN-G  175 (342)
T ss_dssp             CCSCBHHHHHHTC-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT-C
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC-C
Confidence            986 677766554 469999999999999999999999999999999999998543 2   49999999998765432 2


Q ss_pred             ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCC---ChHHHHHHHHHhcCCCCCCCCccCCCCC
Q 012062          155 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGK---NEAEQLSKIFELCGSPDETIWPGVSKMP  231 (472)
Q Consensus       155 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~  231 (472)
                      .....++|+.|+|||++.+ ..++.++|||||||++|+|++|..||...   +..+.+..+...........        
T Consensus       176 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~--------  246 (342)
T 2qr7_A          176 LLMTPCYTANFVAPEVLER-QGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGY--------  246 (342)
T ss_dssp             CBCCSSCCSSCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTT--------
T ss_pred             ceeccCCCccccCHHHhcC-CCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccc--------
Confidence            3345678999999999976 45788999999999999999999999863   44555555544322222111        


Q ss_pred             ccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          232 AYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                        +..+++++++||++||..||++|+|+.|+|+|+||..
T Consensus       247 ------------------~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          247 ------------------WNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             ------------------TTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred             ------------------cccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence                              2357789999999999999999999999999999943


No 86 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=4.1e-43  Score=356.88  Aligned_cols=237  Identities=23%  Similarity=0.384  Sum_probs=194.1

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||+++... ........+.+|+.+|+.++|||||+++++|.+                .+.+||||||
T Consensus        33 ~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~----------------~~~~~lv~e~   96 (384)
T 4fr4_A           33 IVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD----------------EEDMFMVVDL   96 (384)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC----------------SSEEEEEECC
T ss_pred             EEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe----------------CCEEEEEEec
Confidence            47889999999999997653 223345678899999999999999999999987                5689999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      +.+ +|..++.. ...+++..++.|+.||+.||.|||++||+||||||+||||+.++.+||+|||+++.+..  ......
T Consensus        97 ~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~--~~~~~~  173 (384)
T 4fr4_A           97 LLGGDLRYHLQQ-NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITT  173 (384)
T ss_dssp             CTTEEHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT--TCCBCC
T ss_pred             CCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccC--CCceec
Confidence            986 55555554 45699999999999999999999999999999999999999999999999999987643  233455


Q ss_pred             ccccCCCCChhhhcCC--CCCCCCcchhhHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHhcCCCCCCCCccCCCCCcc
Q 012062          159 RVITLWYRPPELLLGA--TKYGPAVDMWSVGCIFAELLNGKPILPGKNE---AEQLSKIFELCGSPDETIWPGVSKMPAY  233 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~--~~~~~~~DiwSlG~il~ell~G~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~  233 (472)
                      .+||+.|+|||++...  ..++.++||||||||+|+|++|+.||...+.   .+.+..+......               
T Consensus       174 ~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~---------------  238 (384)
T 4fr4_A          174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVT---------------  238 (384)
T ss_dssp             CCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCC---------------
T ss_pred             cCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccC---------------
Confidence            7899999999998742  3588999999999999999999999985433   2333333221110               


Q ss_pred             ccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCC-HHHHhcCCCCCC
Q 012062          234 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRIS-AKDALDSEYFWT  286 (472)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t-~~elL~h~~f~~  286 (472)
                                     ....++..+.+||++||..||++|++ ++++++|+||..
T Consensus       239 ---------------~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~  277 (384)
T 4fr4_A          239 ---------------YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND  277 (384)
T ss_dssp             ---------------CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTT
T ss_pred             ---------------CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhc
Confidence                           01246778999999999999999998 999999999953


No 87 
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=2.8e-43  Score=369.06  Aligned_cols=239  Identities=33%  Similarity=0.542  Sum_probs=202.4

Q ss_pred             CceeccCCCEEEEEEeecCCcC-CCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEK-EGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||++...... ......+.+|+.+|++|+|||||++++++..                .+.+||||||
T Consensus        44 ~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----------------~~~~~lv~e~  107 (484)
T 3nyv_A           44 LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED----------------KGYFYLVGEV  107 (484)
T ss_dssp             EEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC----------------SSEEEEEECC
T ss_pred             EEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe----------------CCEEEEEEec
Confidence            4788899999999999766432 3446678899999999999999999999987                6689999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEE---cCCCCeEEeeccceeeeccCCCCc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI---DNEGNLKLADFGLARSFSYDHNNT  155 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl---~~~~~vkL~DFG~a~~~~~~~~~~  155 (472)
                      |.+ +|.+.+... ..+++.+++.|++||+.||+|||+++|+||||||+||||   +.++.+||+|||+++.+...  ..
T Consensus       108 ~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~--~~  184 (484)
T 3nyv_A          108 YTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--KK  184 (484)
T ss_dssp             CCSCBHHHHHHTC-SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCC--CS
T ss_pred             CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccc--cc
Confidence            986 666666544 469999999999999999999999999999999999999   45678999999999766432  23


Q ss_pred             cccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCcccc
Q 012062          156 LTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNH  235 (472)
Q Consensus       156 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  235 (472)
                      ....++|+.|+|||++.+  .++.++||||||||+|+|++|..||.+.+..+.+..+..........             
T Consensus       185 ~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-------------  249 (484)
T 3nyv_A          185 MKDKIGTAYYIAPEVLHG--TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELP-------------  249 (484)
T ss_dssp             HHHHTTGGGTCCHHHHHT--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSG-------------
T ss_pred             cccCCCCccccCceeecC--CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCc-------------
Confidence            445678999999999976  58999999999999999999999999999999888887643332221             


Q ss_pred             CCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          236 FKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                   .+..++.++++||++||..||++|||+.|+|+|+||..
T Consensus       250 -------------~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~  287 (484)
T 3nyv_A          250 -------------QWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT  287 (484)
T ss_dssp             -------------GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHH
T ss_pred             -------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcc
Confidence                         22357889999999999999999999999999999954


No 88 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=6.7e-44  Score=351.40  Aligned_cols=236  Identities=22%  Similarity=0.266  Sum_probs=168.8

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Ch
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DL   84 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l   84 (472)
                      .+|+.||||+++.....   ......|+.++.+|+|||||++++++...+.            ....+|||||||++ +|
T Consensus        24 ~~g~~VAvK~l~~~~~~---~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~------------~~~~~~lV~Ey~~~gsL   88 (303)
T 3hmm_A           24 WRGEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAADNKDNG------------TWTQLWLVSDYHEHGSL   88 (303)
T ss_dssp             ETTEEEEEEEECGGGHH---HHHHHHHHHTSTTCCCTTBCCEEEEEEEECS------------SSEEEEEEEECCTTCBH
T ss_pred             ECCEEEEEEEECccchh---hHHHHHHHHHHhcCCCCCCCcEEEEEEecCC------------CceEEEEEecCCCCCcH
Confidence            47999999999754321   1122346666678899999999999986321            12368999999995 77


Q ss_pred             hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC--
Q 012062           85 TGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN--------QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN--  154 (472)
Q Consensus        85 ~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~--------giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~--  154 (472)
                      .+++.+.  .+++..+.+|+.|++.||+|||++        +||||||||+||||+.++++||+|||+|+........  
T Consensus        89 ~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~  166 (303)
T 3hmm_A           89 FDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID  166 (303)
T ss_dssp             HHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEES
T ss_pred             HHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCcee
Confidence            7776543  589999999999999999999987        9999999999999999999999999999877543322  


Q ss_pred             -ccccccccCCCCChhhhcCCC-----CCCCCcchhhHHHHHHHHHhCCCCCCCCCh--------------HHHHHHHHH
Q 012062          155 -TLTNRVITLWYRPPELLLGAT-----KYGPAVDMWSVGCIFAELLNGKPILPGKNE--------------AEQLSKIFE  214 (472)
Q Consensus       155 -~~~~~~gt~~y~aPE~l~~~~-----~~~~~~DiwSlG~il~ell~G~~pf~~~~~--------------~~~~~~i~~  214 (472)
                       .....+||+.|||||++.+..     .++.++||||||||||||+||..||.....              .+.+.+...
T Consensus       167 ~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  246 (303)
T 3hmm_A          167 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC  246 (303)
T ss_dssp             CC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHT
T ss_pred             eecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHh
Confidence             223457999999999997532     256789999999999999999877643321              111111111


Q ss_pred             hcCCCCCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          215 LCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                      ...                  ..+..+..    .........+.+||.+||..||++|||+.||++
T Consensus       247 ~~~------------------~rp~~p~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~  290 (303)
T 3hmm_A          247 EQK------------------LRPNIPNR----WQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             TSC------------------CCCCCCGG----GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             ccc------------------CCCCCCcc----ccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            000                  00000000    000123457889999999999999999999985


No 89 
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=3.4e-43  Score=369.45  Aligned_cols=239  Identities=30%  Similarity=0.498  Sum_probs=200.6

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|+++.+++.||||+++...........+.+|+.+|+.|+|||||+++++|..                ...+|||||||
T Consensus        55 ~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----------------~~~~~lv~e~~  118 (494)
T 3lij_A           55 LCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED----------------KRNYYLVMECY  118 (494)
T ss_dssp             EEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC----------------SSEEEEEEECC
T ss_pred             EEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe----------------CCEEEEEEecC
Confidence            47889999999999998765444456778899999999999999999999987                56899999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCC---CCeEEeeccceeeeccCCCCcc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE---GNLKLADFGLARSFSYDHNNTL  156 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~---~~vkL~DFG~a~~~~~~~~~~~  156 (472)
                      .+ +|.+.+... ..+++..++.|++||+.||+|||++||+||||||+||||+..   +.+||+|||++..+...  ...
T Consensus       119 ~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~--~~~  195 (494)
T 3lij_A          119 KGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ--KKM  195 (494)
T ss_dssp             CSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT--BCB
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC--ccc
Confidence            86 666655443 469999999999999999999999999999999999999764   44999999999876533  234


Q ss_pred             ccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccC
Q 012062          157 TNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF  236 (472)
Q Consensus       157 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  236 (472)
                      ...++|+.|+|||++.+  .++.++||||||||+|+|++|..||.+.+..+.+..+...........             
T Consensus       196 ~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~-------------  260 (494)
T 3lij_A          196 KERLGTAYYIAPEVLRK--KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPE-------------  260 (494)
T ss_dssp             CCCCSCTTTCCHHHHTT--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGG-------------
T ss_pred             cccCCCcCeeCHHHHcc--cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchh-------------
Confidence            45678999999999864  589999999999999999999999999999998888876544333222             


Q ss_pred             CCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          237 KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                   +..++..+++||++||..||++|||+.|+|+|+||..
T Consensus       261 -------------~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          261 -------------WKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             -------------GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHH
T ss_pred             -------------cccCCHHHHHHHHHHCCCChhhCccHHHHhcCccccc
Confidence                         2356788999999999999999999999999999953


No 90 
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=9.9e-44  Score=357.15  Aligned_cols=269  Identities=37%  Similarity=0.616  Sum_probs=208.1

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+|+.||||+++.....+.....+.+|+.+|+.++|+||+++++++......          .....+||||||+
T Consensus        42 ~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~----------~~~~~~~lv~e~~  111 (353)
T 3coi_A           42 SAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL----------RNFYDFYLVMPFM  111 (353)
T ss_dssp             EEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSG----------GGCCCCEEEEECC
T ss_pred             EEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccc----------ccceeEEEEeccc
Confidence            367889999999999986654444556788999999999999999999999863211          0123469999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccccc
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV  160 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~  160 (472)
                      .++|..++..   .+++.+++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++....    .....+
T Consensus       112 ~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~----~~~~~~  184 (353)
T 3coi_A          112 QTDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA----EMTGYV  184 (353)
T ss_dssp             SEEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC------------C
T ss_pred             cCCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCC----Cccccc
Confidence            9887776643   489999999999999999999999999999999999999999999999999876432    233457


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCc--cccCCC
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPA--YNHFKP  238 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~  238 (472)
                      +|..|+|||++.+...++.++||||||||+|+|++|+.||.+.+..+.+..+.+..+.+....+........  +....+
T Consensus       185 ~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (353)
T 3coi_A          185 VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLP  264 (353)
T ss_dssp             CSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSC
T ss_pred             cCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCc
Confidence            799999999998756789999999999999999999999999999999999988777665433322211000  000000


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                       ..........+..++.++++||.+||..||++|||+.|+|+|+||...
T Consensus       265 -~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  312 (353)
T 3coi_A          265 -QTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  312 (353)
T ss_dssp             -BCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             -CCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence             000011122334678899999999999999999999999999999643


No 91 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=2.3e-43  Score=356.10  Aligned_cols=241  Identities=27%  Similarity=0.432  Sum_probs=180.6

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++....   ....+.+|+.+++.|+|+||+++++++..                .+.+||||||+
T Consensus        38 ~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~----------------~~~~~lv~e~~   98 (361)
T 3uc3_A           38 LMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVILT----------------PTHLAIIMEYA   98 (361)
T ss_dssp             EEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------------SSEEEEEEECC
T ss_pred             EEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEee----------------CCEEEEEEEeC
Confidence            478899999999999975432   23567899999999999999999999987                56899999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCC--eEEeeccceeeeccCCCCccc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN--LKLADFGLARSFSYDHNNTLT  157 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~--vkL~DFG~a~~~~~~~~~~~~  157 (472)
                      .+ +|..++... .++++..++.|+.||+.||+|||++||+||||||+||||+.++.  +||+|||+++.....  ....
T Consensus        99 ~~~~L~~~l~~~-~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~--~~~~  175 (361)
T 3uc3_A           99 SGGELYERICNA-GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH--SQPK  175 (361)
T ss_dssp             CSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC------------
T ss_pred             CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc--CCCC
Confidence            85 666665443 36999999999999999999999999999999999999987765  999999998743322  2233


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCC
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK  237 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  237 (472)
                      ..++|+.|+|||++.+....+.++|||||||++|+|++|+.||.+.+....+..+.........       ..+.     
T Consensus       176 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~-------~~~~-----  243 (361)
T 3uc3_A          176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY-------SIPD-----  243 (361)
T ss_dssp             -----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCC-------CCCT-----
T ss_pred             CCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCC-------CCCC-----
Confidence            4578999999999987444445589999999999999999999886553333333221111000       0000     


Q ss_pred             CchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          238 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                                  ...++.++++||++||..||++|||+.|||+|+||...
T Consensus       244 ------------~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          244 ------------DIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             ------------TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred             ------------cCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence                        01367789999999999999999999999999999543


No 92 
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=1e-42  Score=346.27  Aligned_cols=242  Identities=24%  Similarity=0.364  Sum_probs=200.5

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcC-CCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ-HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|+++.+++.||||+++...........+.+|+.+++.+. |+||+++++++..                .+.+||||||
T Consensus        47 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~----------------~~~~~lv~e~  110 (327)
T 3lm5_A           47 QCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN----------------TSEIILILEY  110 (327)
T ss_dssp             EEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC----------------SSEEEEEEEC
T ss_pred             EEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe----------------CCeEEEEEEe
Confidence            3678899999999999876555555677889999999995 6999999999986                5679999999


Q ss_pred             CCC-ChhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcC---CCCeEEeeccceeeeccCCCC
Q 012062           80 MDH-DLTGLADR-PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN---EGNLKLADFGLARSFSYDHNN  154 (472)
Q Consensus        80 ~~g-~l~~~~~~-~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~---~~~vkL~DFG~a~~~~~~~~~  154 (472)
                      +.+ +|.+++.. ....+++.+++.|+.||+.||+|||++||+||||||+||||+.   ++.+||+|||+++......  
T Consensus       111 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~--  188 (327)
T 3lm5_A          111 AAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC--  188 (327)
T ss_dssp             CTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC------
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc--
Confidence            986 66666654 2356999999999999999999999999999999999999997   7889999999998764322  


Q ss_pred             ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccc
Q 012062          155 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYN  234 (472)
Q Consensus       155 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  234 (472)
                      .....++|+.|+|||++.+ ..++.++||||||||+|+|++|+.||...+..+.+..+...........           
T Consensus       189 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~-----------  256 (327)
T 3lm5_A          189 ELREIMGTPEYLAPEILNY-DPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEET-----------  256 (327)
T ss_dssp             -----CCCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTT-----------
T ss_pred             ccccccCCcCccCCeeecC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchh-----------
Confidence            2334578999999999976 5789999999999999999999999999999888888776543332221           


Q ss_pred             cCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          235 HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                                     +..++..+++||.+||..||++|||++|||+|+||...
T Consensus       257 ---------------~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~  294 (327)
T 3lm5_A          257 ---------------FSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQW  294 (327)
T ss_dssp             ---------------TTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCC
T ss_pred             ---------------hcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccc
Confidence                           12467789999999999999999999999999999653


No 93 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=5.3e-43  Score=340.26  Aligned_cols=240  Identities=27%  Similarity=0.394  Sum_probs=201.0

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++...........+.+|+.++++++|+||+++++++..                .+..|+||||+
T Consensus        24 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----------------~~~~~~v~e~~   87 (284)
T 3kk8_A           24 RCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE----------------ESFHYLVFDLV   87 (284)
T ss_dssp             EEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC----------------SSEEEEEECCC
T ss_pred             EEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc----------------CCEEEEEEecC
Confidence            36788999999999998765444445677899999999999999999999986                56789999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCC---eEEeeccceeeeccCCCCcc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADFGLARSFSYDHNNTL  156 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~---vkL~DFG~a~~~~~~~~~~~  156 (472)
                      .+ +|...+... ..+++..++.++.||+.||+|||+++|+||||||+||||+.++.   +||+|||++......  ...
T Consensus        88 ~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~--~~~  164 (284)
T 3kk8_A           88 TGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS--EAW  164 (284)
T ss_dssp             CSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS--CBC
T ss_pred             CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC--ccc
Confidence            86 565655543 36899999999999999999999999999999999999987665   999999999766432  223


Q ss_pred             ccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccC
Q 012062          157 TNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF  236 (472)
Q Consensus       157 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  236 (472)
                      ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.......+...........             
T Consensus       165 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-------------  230 (284)
T 3kk8_A          165 HGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPE-------------  230 (284)
T ss_dssp             CCSCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTT-------------
T ss_pred             cCCCCCcCCcCchhhcC-CCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchh-------------
Confidence            44578999999999986 5689999999999999999999999999998888887765443322211             


Q ss_pred             CCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          237 KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                   +..+++++.+||.+||..||++|||+.|+|+|+||..
T Consensus       231 -------------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  267 (284)
T 3kk8_A          231 -------------WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN  267 (284)
T ss_dssp             -------------TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHS
T ss_pred             -------------hcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccC
Confidence                         1246778999999999999999999999999999954


No 94 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=1e-43  Score=368.65  Aligned_cols=237  Identities=26%  Similarity=0.408  Sum_probs=189.3

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||+++... ........+++|+.+|+.++|+||++++++|..                .+.+||||||
T Consensus       166 ~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~----------------~~~~~lv~e~  229 (446)
T 4ejn_A          166 LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT----------------HDRLCFVMEY  229 (446)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE----------------TTEEEEEECC
T ss_pred             EEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee----------------CCEEEEEEee
Confidence            47889999999999998652 222334567789999999999999999999987                5689999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHV-NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT  157 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~-~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~  157 (472)
                      |++ +|..++.+ ...+++..++.|+.||+.||+|||+ +||+||||||+||||+.++.+||+|||+|+..... .....
T Consensus       230 ~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~  307 (446)
T 4ejn_A          230 ANGGELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-GATMK  307 (446)
T ss_dssp             CSSCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC------C
T ss_pred             CCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC-Ccccc
Confidence            987 55555543 3469999999999999999999998 99999999999999999999999999999753322 23344


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCC
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK  237 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  237 (472)
                      ..++|+.|+|||++.+ ..++.++||||||||||+|++|+.||.+.+..+.+..+.......                  
T Consensus       308 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~------------------  368 (446)
T 4ejn_A          308 TFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF------------------  368 (446)
T ss_dssp             CSSSCGGGCCHHHHHT-SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC------------------
T ss_pred             cccCCccccCHhhcCC-CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCC------------------
Confidence            5688999999999986 678999999999999999999999999999888887776532111                  


Q ss_pred             CchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCC-----CHHHHhcCCCCCC
Q 012062          238 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRI-----SAKDALDSEYFWT  286 (472)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~-----t~~elL~h~~f~~  286 (472)
                                  ...++.++++||.+||..||++|+     |++|||+|+||..
T Consensus       369 ------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~  410 (446)
T 4ejn_A          369 ------------PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG  410 (446)
T ss_dssp             ------------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             ------------CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccC
Confidence                        123677899999999999999999     9999999999953


No 95 
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=3.9e-43  Score=349.36  Aligned_cols=237  Identities=28%  Similarity=0.451  Sum_probs=175.0

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcC-CCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ-HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|+++.+++.||||+++..     ....+.+|+.+++.+. |+||+++++++.+                ...+||||||
T Consensus        29 ~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~----------------~~~~~lv~e~   87 (325)
T 3kn6_A           29 KCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHD----------------QLHTFLVMEL   87 (325)
T ss_dssp             EEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEEC----------------SSEEEEEECC
T ss_pred             EEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEc----------------CCEEEEEEEc
Confidence            3688899999999999743     2456779999999997 9999999999986                5689999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCC---CeEEeeccceeeeccCCCCc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG---NLKLADFGLARSFSYDHNNT  155 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~---~vkL~DFG~a~~~~~~~~~~  155 (472)
                      +++ +|.+++.+. ..+++.+++.|+.||+.||+|||+++|+||||||+||||+.++   .+||+|||+++..... ...
T Consensus        88 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~-~~~  165 (325)
T 3kn6_A           88 LNGGELFERIKKK-KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD-NQP  165 (325)
T ss_dssp             CCSCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred             cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC-CCc
Confidence            986 666666553 4699999999999999999999999999999999999998766   7999999999865432 223


Q ss_pred             cccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCCh-------HHHHHHHHHhcCCCCCCCCccCC
Q 012062          156 LTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNE-------AEQLSKIFELCGSPDETIWPGVS  228 (472)
Q Consensus       156 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-------~~~~~~i~~~~~~~~~~~~~~~~  228 (472)
                      ....++|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+.       .+.+..+.......         
T Consensus       166 ~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~---------  235 (325)
T 3kn6_A          166 LKTPCFTLHYAAPELLNQ-NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSF---------  235 (325)
T ss_dssp             -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCC---------
T ss_pred             ccccCCCcCccCHHHhcC-CCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCC---------
Confidence            345578999999999876 5789999999999999999999999987543       23333332211111         


Q ss_pred             CCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          229 KMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                                       ....+..+++++++||++||..||++|||+.|+|+|+||...
T Consensus       236 -----------------~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~  277 (325)
T 3kn6_A          236 -----------------EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDG  277 (325)
T ss_dssp             -----------------CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTT
T ss_pred             -----------------CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccC
Confidence                             112345688899999999999999999999999999999653


No 96 
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=2.5e-43  Score=369.70  Aligned_cols=239  Identities=32%  Similarity=0.523  Sum_probs=200.4

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++...........+.+|+++|++|+|||||++++++..                ...+|||||||
T Consensus        40 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----------------~~~~~lv~e~~  103 (486)
T 3mwu_A           40 KCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED----------------SSSFYIVGELY  103 (486)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC----------------SSEEEEEECCC
T ss_pred             EEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc----------------CCEEEEEEEcC
Confidence            47888999999999997654444456778899999999999999999999987                56899999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcC---CCCeEEeeccceeeeccCCCCcc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN---EGNLKLADFGLARSFSYDHNNTL  156 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~---~~~vkL~DFG~a~~~~~~~~~~~  156 (472)
                      .+ +|.+.+... ..+++.+++.|++||+.||.|||++||+||||||+||||+.   ++.+||+|||+++.+...  ...
T Consensus       104 ~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~--~~~  180 (486)
T 3mwu_A          104 TGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKM  180 (486)
T ss_dssp             CSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-----
T ss_pred             CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC--Ccc
Confidence            86 666655443 36999999999999999999999999999999999999954   457999999999765432  234


Q ss_pred             ccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccC
Q 012062          157 TNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF  236 (472)
Q Consensus       157 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  236 (472)
                      ...++|+.|+|||++.+  .++.++||||||||+|+|++|..||.+.+..+.+..+..........              
T Consensus       181 ~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~--------------  244 (486)
T 3mwu_A          181 KDRIGTAYYIAPEVLRG--TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLP--------------  244 (486)
T ss_dssp             -CCTTGGGGCCGGGGGS--CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSG--------------
T ss_pred             CCCcCCCCCCCHHHhCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCc--------------
Confidence            45678999999999976  48999999999999999999999999999998888886643332221              


Q ss_pred             CCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          237 KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                  .+..+++++++||++||..||++|||+.|+|+|+||..
T Consensus       245 ------------~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~  282 (486)
T 3mwu_A          245 ------------QWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK  282 (486)
T ss_dssp             ------------GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHH
T ss_pred             ------------ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhcc
Confidence                        13457889999999999999999999999999999964


No 97 
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=8e-44  Score=351.29  Aligned_cols=283  Identities=34%  Similarity=0.586  Sum_probs=209.5

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||++.....  .....+.+|++++++++|+||+++++++...+.....  ..........+||||||+
T Consensus        29 ~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~--~~~~~~~~~~~~lv~e~~  104 (320)
T 2i6l_A           29 SAVDNDCDKRVAIKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD--DVGSLTELNSVYIVQEYM  104 (320)
T ss_dssp             EEEETTTTEEEEEEEEECCSH--HHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC------CCSCSEEEEEEECC
T ss_pred             EEEECCCCeEEEEEEEecCCh--HHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc--ccccccccCceeEEeecc
Confidence            367888999999999975432  2356778999999999999999999999764321100  001112356899999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEc-CCCCeEEeeccceeeeccCC--CCccc
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDH--NNTLT  157 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~-~~~~vkL~DFG~a~~~~~~~--~~~~~  157 (472)
                      +++|.+++..  ..+++..++.++.||+.||+|||++||+||||||+||||+ .++.+||+|||+++......  .....
T Consensus       105 ~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  182 (320)
T 2i6l_A          105 ETDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS  182 (320)
T ss_dssp             SEEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCC
T ss_pred             CCCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccc
Confidence            9988887764  3589999999999999999999999999999999999997 45689999999997654321  12233


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCC-CCccccC
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK-MPAYNHF  236 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~  236 (472)
                      ...+|..|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+.+..+.+.........+..... ++.+...
T Consensus       183 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (320)
T 2i6l_A          183 EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRN  262 (320)
T ss_dssp             GGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHH
T ss_pred             cccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccc
Confidence            446699999999987656789999999999999999999999999999888888877654433221111100 0000000


Q ss_pred             CCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCCCCC
Q 012062          237 KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLP  290 (472)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~~~~  290 (472)
                      .. .............++.++++||++||..||++|||++|+|+|+||.....+
T Consensus       263 ~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p  315 (320)
T 2i6l_A          263 DM-TEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFP  315 (320)
T ss_dssp             HT-TSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC-
T ss_pred             cc-cCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccCc
Confidence            00 000112334556789999999999999999999999999999999754443


No 98 
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=1.1e-42  Score=337.00  Aligned_cols=236  Identities=32%  Similarity=0.444  Sum_probs=199.0

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||+|++......  ....+.+|++++++++|+||+++++++..                ...+||||||+
T Consensus        27 ~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~   88 (277)
T 3f3z_A           27 IAVQKGTRIRRAAKKIPKYFVE--DVDRFKQEIEIMKSLDHPNIIRLYETFED----------------NTDIYLVMELC   88 (277)
T ss_dssp             EEEETTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHTCCCTTBCCEEEEEEC----------------SSEEEEEEECC
T ss_pred             EEEeCCCCcEEEEEeehhhccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEec----------------CCeEEEEEecc
Confidence            3678899999999999865432  35678899999999999999999999986                56799999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEE---cCCCCeEEeeccceeeeccCCCCcc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI---DNEGNLKLADFGLARSFSYDHNNTL  156 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl---~~~~~vkL~DFG~a~~~~~~~~~~~  156 (472)
                      ++ +|.+.+... ..+++.+++.++.||+.||+|||+++|+||||||+||||   +.++.+||+|||++..+...  ...
T Consensus        89 ~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~--~~~  165 (277)
T 3f3z_A           89 TGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMM  165 (277)
T ss_dssp             CSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT--SCB
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc--cch
Confidence            86 665655443 458999999999999999999999999999999999999   77888999999999876532  233


Q ss_pred             ccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccC
Q 012062          157 TNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF  236 (472)
Q Consensus       157 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  236 (472)
                      ....+|+.|+|||++.+  .++.++|||||||++|+|++|+.||...+..+.+..+.+......                
T Consensus       166 ~~~~~t~~y~aPE~~~~--~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------  227 (277)
T 3f3z_A          166 RTKVGTPYYVSPQVLEG--LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFP----------------  227 (277)
T ss_dssp             CCCCSCTTTCCHHHHTT--CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----------------
T ss_pred             hccCCCCCccChHHhcc--cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC----------------
Confidence            44578999999999875  489999999999999999999999999998888887765432211                


Q ss_pred             CCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCC
Q 012062          237 KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFW  285 (472)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~  285 (472)
                                ...+..++..+.+||++||..||++|||+.|+|+|+||.
T Consensus       228 ----------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~  266 (277)
T 3f3z_A          228 ----------EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFE  266 (277)
T ss_dssp             ----------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHH
T ss_pred             ----------chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHh
Confidence                      122335788999999999999999999999999999994


No 99 
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=5.6e-43  Score=345.59  Aligned_cols=241  Identities=24%  Similarity=0.369  Sum_probs=186.5

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||+++...  ......+.+|+++|+++ +|+||+++++++..                .+.+||||||
T Consensus        31 ~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~----------------~~~~~lv~e~   92 (316)
T 2ac3_A           31 TCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEE----------------EDRFYLVFEK   92 (316)
T ss_dssp             EEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE----------------TTEEEEEEEC
T ss_pred             EEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEee----------------CCEEEEEEEc
Confidence            36788899999999997653  23456788999999985 79999999999987                5689999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCC---eEEeeccceeeeccCC---
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADFGLARSFSYDH---  152 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~---vkL~DFG~a~~~~~~~---  152 (472)
                      +++ +|.+++.+. ..+++.+++.++.||+.||+|||+++|+||||||+||||+.++.   +||+|||++..+....   
T Consensus        93 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~  171 (316)
T 2ac3_A           93 MRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS  171 (316)
T ss_dssp             CTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---------
T ss_pred             CCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccc
Confidence            985 676666543 36899999999999999999999999999999999999998776   9999999987654221   


Q ss_pred             ---CCccccccccCCCCChhhhcCC----CCCCCCcchhhHHHHHHHHHhCCCCCCCCChH---------------HHHH
Q 012062          153 ---NNTLTNRVITLWYRPPELLLGA----TKYGPAVDMWSVGCIFAELLNGKPILPGKNEA---------------EQLS  210 (472)
Q Consensus       153 ---~~~~~~~~gt~~y~aPE~l~~~----~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~---------------~~~~  210 (472)
                         .......++|..|+|||++.+.    ..++.++|||||||++|+|++|+.||.+.+..               ..+.
T Consensus       172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  251 (316)
T 2ac3_A          172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFE  251 (316)
T ss_dssp             ----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHH
T ss_pred             cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHH
Confidence               1122345689999999998641    34788999999999999999999999876431               1222


Q ss_pred             HHHHhcCCCCCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          211 KIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       211 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      .+.......                          ....+..++.++++||++||..||++|||+.|+|+|+||..
T Consensus       252 ~i~~~~~~~--------------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  301 (316)
T 2ac3_A          252 SIQEGKYEF--------------------------PDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG  301 (316)
T ss_dssp             HHHHCCCCC--------------------------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC-
T ss_pred             HHhccCccc--------------------------CchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcC
Confidence            222211000                          01223457889999999999999999999999999999954


No 100
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=1.6e-42  Score=337.92  Aligned_cols=238  Identities=29%  Similarity=0.403  Sum_probs=191.2

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||++...... .....+.+|+++|++++|+||+++++++..                ...+||||||+
T Consensus        40 ~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----------------~~~~~lv~e~~  102 (285)
T 3is5_A           40 LVEERSSGLERVIKTINKDRSQ-VPMEQIEAEIEVLKSLDHPNIIKIFEVFED----------------YHNMYIVMETC  102 (285)
T ss_dssp             EEEETTTCCEEEEEEEEGGGCC-SCHHHHHHHHHHHHTCCCTTBCCEEEEEEC----------------SSEEEEEECCC
T ss_pred             EEEEccCCceEEEEEeeccccc-hhHHHHHHHHHHHHhCCCchHHhHHHheec----------------CCeEEEEEEeC
Confidence            4678899999999999876433 235678899999999999999999999986                56799999999


Q ss_pred             CC-ChhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEc---CCCCeEEeeccceeeeccCCC
Q 012062           81 DH-DLTGLADR---PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID---NEGNLKLADFGLARSFSYDHN  153 (472)
Q Consensus        81 ~g-~l~~~~~~---~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~---~~~~vkL~DFG~a~~~~~~~~  153 (472)
                      ++ +|.+.+..   ....+++..++.|+.||+.||+|||+++|+||||||+||||+   .++.+||+|||++..+...  
T Consensus       103 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~--  180 (285)
T 3is5_A          103 EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD--  180 (285)
T ss_dssp             SCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------
T ss_pred             CCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc--
Confidence            86 67666543   234699999999999999999999999999999999999994   4578999999999765432  


Q ss_pred             CccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCcc
Q 012062          154 NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY  233 (472)
Q Consensus       154 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  233 (472)
                      .......+|..|+|||++.+  .++.++|||||||++|+|++|+.||.+.+..+....+..........           
T Consensus       181 ~~~~~~~~t~~y~aPE~~~~--~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-----------  247 (285)
T 3is5_A          181 EHSTNAAGTALYMAPEVFKR--DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE-----------  247 (285)
T ss_dssp             ------CTTGGGCCHHHHTT--CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC------------
T ss_pred             ccCcCcccccCcCChHHhcc--CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccc-----------
Confidence            22344578999999998864  57899999999999999999999999988777666654422111100           


Q ss_pred             ccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          234 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                      ...+++.+.+||++||..||++|||+.|||+|+||+.
T Consensus       248 ----------------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          248 ----------------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             -----------------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             ----------------cCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence                            0125678999999999999999999999999999953


No 101
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=3.2e-42  Score=333.17  Aligned_cols=240  Identities=32%  Similarity=0.462  Sum_probs=194.6

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++..... .....+.+|+.+++.++|+||+++++++..                .+.+||||||+
T Consensus        25 ~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~   87 (276)
T 2yex_A           25 LAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRRE----------------GNIQYLFLEYC   87 (276)
T ss_dssp             EEEETTTCCEEEEEEEEGGGCT-THHHHHHHHHHHHHTCCCTTBCCEEEEEEE----------------TTEEEEEEECC
T ss_pred             EEEECCCCcEEEEEEeeeccch-hhhHHHHHHHHHHHhcCCCCceeeeeEEEc----------------CCEEEEEEEec
Confidence            3678889999999999865432 345678899999999999999999999986                56889999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC-Ccccc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN-NTLTN  158 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~-~~~~~  158 (472)
                      ++ +|.+++.. ...+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||++..+..... .....
T Consensus        88 ~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  166 (276)
T 2yex_A           88 SGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK  166 (276)
T ss_dssp             TTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCC
T ss_pred             CCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccC
Confidence            86 66666544 45699999999999999999999999999999999999999999999999999986643221 22344


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHH-HHHHHHhcCCCCCCCCccCCCCCccccCC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQ-LSKIFELCGSPDETIWPGVSKMPAYNHFK  237 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  237 (472)
                      .++|..|+|||++.+...++.++|||||||++|+|++|+.||...+.... +..+......                   
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------  227 (276)
T 2yex_A          167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-------------------  227 (276)
T ss_dssp             CCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT-------------------
T ss_pred             CccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc-------------------
Confidence            57899999999998744457789999999999999999999987665432 2222211000                   


Q ss_pred             CchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          238 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                               ...+..++..+++||.+||..||++|||+.|+++|+||..
T Consensus       228 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~  267 (276)
T 2yex_A          228 ---------LNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK  267 (276)
T ss_dssp             ---------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             ---------cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccC
Confidence                     0012357788999999999999999999999999999964


No 102
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=7.6e-43  Score=348.89  Aligned_cols=244  Identities=27%  Similarity=0.417  Sum_probs=195.7

Q ss_pred             CceeccCCCEEEEEEeecCC---cCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEE
Q 012062            1 MAREIKTGEIVALKKIRMDN---EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVF   77 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~---~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVm   77 (472)
                      +|++..+++.||||+++...   ........+.+|+++|++++||||+++++++.+                .+.+||||
T Consensus        44 ~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----------------~~~~~lv~  107 (345)
T 3hko_A           44 VAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED----------------EQYICLVM  107 (345)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC----------------SSEEEEEE
T ss_pred             EEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc----------------CCeEEEEE
Confidence            46788999999999997542   123455678899999999999999999999986                56899999


Q ss_pred             ecCCC-ChhhhhcC---------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 012062           78 EYMDH-DLTGLADR---------------------------------------PGLRFTVPQIKCYMKQLLTGLHYCHVN  117 (472)
Q Consensus        78 Ey~~g-~l~~~~~~---------------------------------------~~~~l~~~~i~~i~~Qll~aL~~LH~~  117 (472)
                      |||++ +|.+++..                                       ....+++..++.|+.||+.||+|||++
T Consensus       108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~  187 (345)
T 3hko_A          108 ELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ  187 (345)
T ss_dssp             ECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence            99985 66665531                                       011246778999999999999999999


Q ss_pred             CccccCCCCCcEEEcCCC--CeEEeeccceeeeccCCC---CccccccccCCCCChhhhcCC-CCCCCCcchhhHHHHHH
Q 012062          118 QVLHRDIKGSNLLIDNEG--NLKLADFGLARSFSYDHN---NTLTNRVITLWYRPPELLLGA-TKYGPAVDMWSVGCIFA  191 (472)
Q Consensus       118 giiHrDLKp~NILl~~~~--~vkL~DFG~a~~~~~~~~---~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlG~il~  191 (472)
                      +|+||||||+||||+.++  .+||+|||+++.+.....   .......+|+.|+|||++.+. ..++.++||||||||+|
T Consensus       188 ~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~  267 (345)
T 3hko_A          188 GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLH  267 (345)
T ss_dssp             TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHH
T ss_pred             CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHH
Confidence            999999999999998776  799999999987643222   123456789999999998642 56889999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCC
Q 012062          192 ELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQ  271 (472)
Q Consensus       192 ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~  271 (472)
                      +|++|+.||.+.+..+.+..+..........                          .+..++.++++||.+||..||++
T Consensus       268 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~li~~~l~~~p~~  321 (345)
T 3hko_A          268 LLLMGAVPFPGVNDADTISQVLNKKLCFENP--------------------------NYNVLSPLARDLLSNLLNRNVDE  321 (345)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHCCCCTTSG--------------------------GGGGSCHHHHHHHHHHSCSCTTT
T ss_pred             HHHHCCCCCCCCChHHHHHHHHhcccccCCc--------------------------ccccCCHHHHHHHHHHcCCChhH
Confidence            9999999999999988888887643222111                          12346788999999999999999


Q ss_pred             CCCHHHHhcCCCCCC
Q 012062          272 RISAKDALDSEYFWT  286 (472)
Q Consensus       272 R~t~~elL~h~~f~~  286 (472)
                      |||+.|+|+|+||..
T Consensus       322 Rps~~~~l~hp~~~~  336 (345)
T 3hko_A          322 RFDAMRALQHPWISQ  336 (345)
T ss_dssp             SCCHHHHHHSHHHHT
T ss_pred             CCCHHHHhcChhhcc
Confidence            999999999999954


No 103
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=9e-43  Score=337.84  Aligned_cols=238  Identities=29%  Similarity=0.473  Sum_probs=174.0

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||+++... ........+.+|++++++++|+||+++++++..                .+.+||||||
T Consensus        29 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~   92 (278)
T 3cok_A           29 RAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED----------------SNYVYLVLEM   92 (278)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC----------------SSEEEEEEEC
T ss_pred             EEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc----------------CCeEEEEEec
Confidence            36788899999999997543 223345678899999999999999999999986                5689999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      +++ +|..++......+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++........ ....
T Consensus        93 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~~  171 (278)
T 3cok_A           93 CHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE-KHYT  171 (278)
T ss_dssp             CTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---------
T ss_pred             CCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC-ccee
Confidence            986 67777776656799999999999999999999999999999999999999999999999999987643222 2233


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                      ..+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+.+..+....                   .  
T Consensus       172 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-------------------~--  229 (278)
T 3cok_A          172 LCGTPNYISPEIATR-SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLAD-------------------Y--  229 (278)
T ss_dssp             ---------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSC-------------------C--
T ss_pred             ccCCCCcCCcchhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcc-------------------c--
Confidence            568999999999876 567899999999999999999999998766544333221000                   0  


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                               .....++.++.+||.+||..||++|||+.|+|+|+||..
T Consensus       230 ---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  268 (278)
T 3cok_A          230 ---------EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSR  268 (278)
T ss_dssp             ---------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC-
T ss_pred             ---------CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccC
Confidence                     001236778999999999999999999999999999954


No 104
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=1.4e-42  Score=365.71  Aligned_cols=239  Identities=33%  Similarity=0.503  Sum_probs=200.9

Q ss_pred             CceeccCCCEEEEEEeecCCcC-----------CCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCc
Q 012062            1 MAREIKTGEIVALKKIRMDNEK-----------EGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY   69 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~-----------~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~   69 (472)
                      +|+++.+++.||||+++.....           +.....+.+|+.+|++|+|||||++++++..                
T Consensus        54 ~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----------------  117 (504)
T 3q5i_A           54 LCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFED----------------  117 (504)
T ss_dssp             EEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEEC----------------
T ss_pred             EEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc----------------
Confidence            4788899999999999865322           1345678899999999999999999999987                


Q ss_pred             CCeEEEEEecCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCC---CeEEeeccce
Q 012062           70 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG---NLKLADFGLA  145 (472)
Q Consensus        70 ~~~~~iVmEy~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~---~vkL~DFG~a  145 (472)
                      ...+|||||||.+ +|.+.+... ..+++..++.|++||+.||+|||+++|+||||||+||||+.++   .+||+|||++
T Consensus       118 ~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  196 (504)
T 3q5i_A          118 KKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS  196 (504)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTC
T ss_pred             CCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCC
Confidence            6689999999986 666666543 3699999999999999999999999999999999999999876   6999999999


Q ss_pred             eeeccCCCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCc
Q 012062          146 RSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWP  225 (472)
Q Consensus       146 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  225 (472)
                      +.+...  ......++|+.|+|||++.+  .++.++||||||||+|+|++|..||.+.+..+.+..+........     
T Consensus       197 ~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-----  267 (504)
T 3q5i_A          197 SFFSKD--YKLRDRLGTAYYIAPEVLKK--KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD-----  267 (504)
T ss_dssp             EECCTT--SCBCCCCSCTTTCCHHHHTT--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-----
T ss_pred             EEcCCC--CccccccCCcCCCCHHHhcc--CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC-----
Confidence            876533  23445678999999999864  589999999999999999999999999999888888865322211     


Q ss_pred             cCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          226 GVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                           ...+..++.++++||++||..||++|||+.|+|+|+||..
T Consensus       268 ---------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~  307 (504)
T 3q5i_A          268 ---------------------FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKK  307 (504)
T ss_dssp             ---------------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             ---------------------ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhh
Confidence                                 1234568889999999999999999999999999999964


No 105
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=9e-43  Score=356.64  Aligned_cols=239  Identities=25%  Similarity=0.350  Sum_probs=184.2

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHH-hcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILK-KLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~-~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|+++.|++.||||+++..       ..+.+|+.++. .++|+||++++++|....            ....++||||||
T Consensus        80 ~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~------------~~~~~~~lv~E~  140 (400)
T 1nxk_A           80 QIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLY------------AGRKCLLIVMEC  140 (400)
T ss_dssp             EEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE------------TTEEEEEEEEEC
T ss_pred             EEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecc------------cCCcEEEEEEEe
Confidence            4788999999999999632       35678999874 558999999999986411            014578999999


Q ss_pred             CCC-ChhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcC---CCCeEEeeccceeeeccCCCC
Q 012062           80 MDH-DLTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN---EGNLKLADFGLARSFSYDHNN  154 (472)
Q Consensus        80 ~~g-~l~~~~~~~-~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~---~~~vkL~DFG~a~~~~~~~~~  154 (472)
                      |++ +|.+++... ...+++.+++.|+.||+.||+|||+++|+||||||+||||+.   ++.+||+|||+++.....  .
T Consensus       141 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~--~  218 (400)
T 1nxk_A          141 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--N  218 (400)
T ss_dssp             CCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----
T ss_pred             CCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCC--C
Confidence            986 787777654 346999999999999999999999999999999999999997   788999999999865432  2


Q ss_pred             ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHH----HHHHHHHhcCCCCCCCCccCCCC
Q 012062          155 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE----QLSKIFELCGSPDETIWPGVSKM  230 (472)
Q Consensus       155 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~  230 (472)
                      .....++|+.|+|||++.+ ..++.++||||||||||+|++|+.||.+.+...    ....+..........        
T Consensus       219 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~--------  289 (400)
T 1nxk_A          219 SLTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP--------  289 (400)
T ss_dssp             --------CTTCCGGGSCC-CCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTT--------
T ss_pred             ccccCCCCCCccCHhhcCC-CCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCc--------
Confidence            3445678999999999876 678999999999999999999999998765432    233333221111111        


Q ss_pred             CccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          231 PAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                                        .+..++.++++||++||..||++|||+.|||+|+||+..
T Consensus       290 ------------------~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  328 (400)
T 1nxk_A          290 ------------------EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  328 (400)
T ss_dssp             ------------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             ------------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence                              123577899999999999999999999999999999653


No 106
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=1.9e-42  Score=349.97  Aligned_cols=240  Identities=26%  Similarity=0.449  Sum_probs=198.7

Q ss_pred             CceeccCCCEEEEEEeecCCcC------CCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeE
Q 012062            1 MAREIKTGEIVALKKIRMDNEK------EGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGST   73 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~------~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (472)
                      +|++..+|+.||||+++.....      +.....+.+|+.+++++ +|+||+++++++..                .+.+
T Consensus       112 ~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~----------------~~~~  175 (365)
T 2y7j_A          112 RCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES----------------SSFM  175 (365)
T ss_dssp             EEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB----------------SSEE
T ss_pred             EEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee----------------CCEE
Confidence            3678889999999999865422      12245677899999999 79999999999986                5689


Q ss_pred             EEEEecCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCC
Q 012062           74 YMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDH  152 (472)
Q Consensus        74 ~iVmEy~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~  152 (472)
                      ||||||+++ +|.+++.. ...+++..++.|+.||+.||.|||++||+||||||+||||+.++.+||+|||++..+... 
T Consensus       176 ~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~-  253 (365)
T 2y7j_A          176 FLVFDLMRKGELFDYLTE-KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG-  253 (365)
T ss_dssp             EEEECCCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT-
T ss_pred             EEEEEeCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCC-
Confidence            999999997 66666543 346999999999999999999999999999999999999999999999999999876532 


Q ss_pred             CCccccccccCCCCChhhhcCC-----CCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccC
Q 012062          153 NNTLTNRVITLWYRPPELLLGA-----TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGV  227 (472)
Q Consensus       153 ~~~~~~~~gt~~y~aPE~l~~~-----~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  227 (472)
                       ......++|+.|+|||++.+.     ..++.++||||||||+|+|++|+.||...+....+..+........       
T Consensus       254 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-------  325 (365)
T 2y7j_A          254 -EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFS-------  325 (365)
T ss_dssp             -CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC-------
T ss_pred             -cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC-------
Confidence             233456789999999998642     3578899999999999999999999999888877777755322111       


Q ss_pred             CCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCC
Q 012062          228 SKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFW  285 (472)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~  285 (472)
                                         ...+..++..+.+||++||..||++|||+.|+|+|+||.
T Consensus       326 -------------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          326 -------------------SPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             -------------------HHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             -------------------CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence                               122345778899999999999999999999999999994


No 107
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=8.7e-43  Score=338.30  Aligned_cols=235  Identities=30%  Similarity=0.483  Sum_probs=194.8

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||++.... ........+.+|+.++++++|+||+++++++..                .+.+||||||
T Consensus        27 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~   90 (279)
T 3fdn_A           27 LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD----------------ATRVYLILEY   90 (279)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC----------------SSEEEEEECC
T ss_pred             EEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec----------------CCEEEEEEec
Confidence            46788999999999997543 222345668899999999999999999999986                5679999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      +++ +|...+... ..+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++......   ....
T Consensus        91 ~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~---~~~~  166 (279)
T 3fdn_A           91 APLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTD  166 (279)
T ss_dssp             CTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC----------
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc---cccc
Confidence            996 566655443 36899999999999999999999999999999999999999999999999998654322   2334


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                      ..+|..|+|||++.+ ..++.++|||||||++|+|++|..||...+..+....+.......+                  
T Consensus       167 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------  227 (279)
T 3fdn_A          167 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------------------  227 (279)
T ss_dssp             -CCCCTTCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC------------------
T ss_pred             cCCCCCccCHhHhcc-CCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCC------------------
Confidence            578999999999876 5788999999999999999999999999988888777765332211                  


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                  ..++..+++||.+||..||++|||+.|||+|+||..
T Consensus       228 ------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~  263 (279)
T 3fdn_A          228 ------------DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA  263 (279)
T ss_dssp             ------------TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHH
T ss_pred             ------------CcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccC
Confidence                        135678999999999999999999999999999954


No 108
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=1.3e-42  Score=377.41  Aligned_cols=237  Identities=24%  Similarity=0.424  Sum_probs=201.4

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEe
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFE   78 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmE   78 (472)
                      +|+++.+++.||||+++... ........++.|+.+|..+ +|+||++++++|++                .+.+|||||
T Consensus       359 ~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~----------------~~~~~lV~E  422 (674)
T 3pfq_A          359 LSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT----------------MDRLYFVME  422 (674)
T ss_dssp             EEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBC----------------SSEEEEEEE
T ss_pred             EEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEe----------------CCEEEEEEe
Confidence            47889999999999998652 2233456778999999988 79999999999986                568999999


Q ss_pred             cCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccc
Q 012062           79 YMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT  157 (472)
Q Consensus        79 y~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~  157 (472)
                      |+++ +|..++.+. ..+++.+++.|+.||+.||+|||+++|+||||||+||||+.++++||+|||+|+...... ....
T Consensus       423 ~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~-~~~~  500 (674)
T 3pfq_A          423 YVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG-VTTK  500 (674)
T ss_dssp             CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT-CCBC
T ss_pred             CcCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCC-cccc
Confidence            9986 666665543 469999999999999999999999999999999999999999999999999998643322 3345


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCC
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK  237 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  237 (472)
                      ..+||+.|+|||++.+ ..|+.++||||||||||||++|+.||.+.+..+++..|.+.....                  
T Consensus       501 ~~~GT~~Y~APE~l~~-~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~------------------  561 (674)
T 3pfq_A          501 TFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY------------------  561 (674)
T ss_dssp             CCCSCSSSCCHHHHTC-CCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCC------------------
T ss_pred             cccCCCcccCHhhhcC-CCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCC------------------
Confidence            5689999999999976 678999999999999999999999999999999888886532111                  


Q ss_pred             CchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCH-----HHHhcCCCCCC
Q 012062          238 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISA-----KDALDSEYFWT  286 (472)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~-----~elL~h~~f~~  286 (472)
                                  ...++.++++||++||..||++|+++     +||++|+||..
T Consensus       562 ------------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~  603 (674)
T 3pfq_A          562 ------------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY  603 (674)
T ss_dssp             ------------CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSS
T ss_pred             ------------CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccC
Confidence                        12467899999999999999999997     99999999964


No 109
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=2.3e-42  Score=344.91  Aligned_cols=240  Identities=30%  Similarity=0.431  Sum_probs=199.7

Q ss_pred             CceeccCCCEEEEEEeecCCc-CCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||+|++..... .......+.+|+.+++.++|+||+++++++.+                .+.+||||||
T Consensus        59 ~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----------------~~~~~lv~e~  122 (335)
T 2owb_A           59 EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED----------------NDFVFVVLEL  122 (335)
T ss_dssp             EEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC----------------SSEEEEEECC
T ss_pred             EEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec----------------CCeEEEEEec
Confidence            367889999999999986532 22345567889999999999999999999986                5689999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      +++ +|.+++.. ...+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||++....... .....
T Consensus       123 ~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~  200 (335)
T 2owb_A          123 CRRRSLLELHKR-RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKV  200 (335)
T ss_dssp             CTTCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT-CCBCC
T ss_pred             CCCCCHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc-ccccc
Confidence            996 56555543 3469999999999999999999999999999999999999999999999999998765332 22344


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                      .++|..|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+.+..+.......                   
T Consensus       201 ~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-------------------  260 (335)
T 2owb_A          201 LCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI-------------------  260 (335)
T ss_dssp             CCSCCSSCCHHHHHT-SCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC-------------------
T ss_pred             cCCCccccCHHHhcc-CCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCC-------------------
Confidence            578999999999986 568899999999999999999999999988877776665432111                   


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCCCC
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPL  289 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~~~  289 (472)
                                 ...++..+.+||++||..||++|||+.|+|+|+||.....
T Consensus       261 -----------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~  300 (335)
T 2owb_A          261 -----------PKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI  300 (335)
T ss_dssp             -----------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred             -----------CccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCCc
Confidence                       1135678999999999999999999999999999966433


No 110
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=9.3e-43  Score=348.13  Aligned_cols=231  Identities=25%  Similarity=0.381  Sum_probs=189.0

Q ss_pred             CceeccCCCEEEEEEeecCCcCCC------chhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEE
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEG------FPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTY   74 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~------~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (472)
                      +|+++.+++.||||+++.......      ....+.+|+.+|++++|+||++++++|..                .+.+|
T Consensus        42 ~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~----------------~~~~~  105 (335)
T 3dls_A           42 TAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN----------------QGFFQ  105 (335)
T ss_dssp             EEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC----------------SSEEE
T ss_pred             EEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee----------------CCEEE
Confidence            367899999999999987643221      33456789999999999999999999986                66899


Q ss_pred             EEEecCCC--ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCC
Q 012062           75 MVFEYMDH--DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDH  152 (472)
Q Consensus        75 iVmEy~~g--~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~  152 (472)
                      |||||+..  +|..++... ..+++..++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++..... 
T Consensus       106 lv~e~~~~g~~l~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~-  183 (335)
T 3dls_A          106 LVMEKHGSGLDLFAFIDRH-PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG-  183 (335)
T ss_dssp             EEEECCTTSCBHHHHHHTC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT-
T ss_pred             EEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCC-
Confidence            99999864  566666543 46999999999999999999999999999999999999999999999999999876532 


Q ss_pred             CCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCc
Q 012062          153 NNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPA  232 (472)
Q Consensus       153 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  232 (472)
                       ......++|+.|+|||++.+...++.++|||||||++|+|++|+.||......      ...           ...   
T Consensus       184 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~-----------~~~---  242 (335)
T 3dls_A          184 -KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------VEA-----------AIH---  242 (335)
T ss_dssp             -CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------TTT-----------CCC---
T ss_pred             -CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------Hhh-----------ccC---
Confidence             23344578999999999987544588999999999999999999999653210      000           000   


Q ss_pred             cccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          233 YNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                      ....++.++.+||.+||..||++|||+.|||+|+||+.
T Consensus       243 ----------------~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~  280 (335)
T 3dls_A          243 ----------------PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ  280 (335)
T ss_dssp             ----------------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTC
T ss_pred             ----------------CCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccC
Confidence                            01136778999999999999999999999999999964


No 111
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=1.2e-42  Score=338.61  Aligned_cols=239  Identities=20%  Similarity=0.289  Sum_probs=179.9

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++...........+.+|..+++.++|+||+++++++..                .+.+||||||+
T Consensus        25 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~----------------~~~~~lv~e~~   88 (290)
T 3fme_A           25 KMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR----------------EGDVWICMELM   88 (290)
T ss_dssp             EEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC----------------SSSEEEEEECC
T ss_pred             EEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec----------------cCCEEEEEehh
Confidence            36788999999999998654333333344455556888899999999999986                55789999999


Q ss_pred             CCChhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcc
Q 012062           81 DHDLTGLADR---PGLRFTVPQIKCYMKQLLTGLHYCHVN-QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTL  156 (472)
Q Consensus        81 ~g~l~~~~~~---~~~~l~~~~i~~i~~Qll~aL~~LH~~-giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~  156 (472)
                      +++|.+++..   ....+++..++.|+.||+.||+|||++ +|+||||||+||||+.++.+||+|||+++......  ..
T Consensus        89 ~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~  166 (290)
T 3fme_A           89 DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV--AK  166 (290)
T ss_dssp             SEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC--------------
T ss_pred             ccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccc--cc
Confidence            9987665543   455799999999999999999999998 99999999999999999999999999997664322  22


Q ss_pred             ccccccCCCCChhhhc---CCCCCCCCcchhhHHHHHHHHHhCCCCCCC-CChHHHHHHHHHhcCCCCCCCCccCCCCCc
Q 012062          157 TNRVITLWYRPPELLL---GATKYGPAVDMWSVGCIFAELLNGKPILPG-KNEAEQLSKIFELCGSPDETIWPGVSKMPA  232 (472)
Q Consensus       157 ~~~~gt~~y~aPE~l~---~~~~~~~~~DiwSlG~il~ell~G~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  232 (472)
                      ....+|+.|+|||++.   ....++.++|||||||++|+|++|+.||.. ......+..+.........           
T Consensus       167 ~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----------  235 (290)
T 3fme_A          167 DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLP-----------  235 (290)
T ss_dssp             ---CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCC-----------
T ss_pred             cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcc-----------
Confidence            3346899999999972   335688899999999999999999999986 3444444444432111100           


Q ss_pred             cccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCC
Q 012062          233 YNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFW  285 (472)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~  285 (472)
                                       ...++.++.+||.+||..||++|||+.|+|+|+||.
T Consensus       236 -----------------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~  271 (290)
T 3fme_A          236 -----------------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFT  271 (290)
T ss_dssp             -----------------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             -----------------cccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccc
Confidence                             023677899999999999999999999999999994


No 112
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=4e-42  Score=336.22  Aligned_cols=240  Identities=29%  Similarity=0.423  Sum_probs=199.1

Q ss_pred             CceeccCCCEEEEEEeecCCcC-CCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEK-EGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||+|++...... ......+.+|+.++++++|+||+++++++..                .+.+||||||
T Consensus        33 ~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----------------~~~~~lv~e~   96 (294)
T 2rku_A           33 EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED----------------NDFVFVVLEL   96 (294)
T ss_dssp             EEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC----------------SSEEEEEEEC
T ss_pred             EEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc----------------CCEEEEEEec
Confidence            3678889999999999765322 2344567889999999999999999999986                5679999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      +++ +|.+++.. ...+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++....... .....
T Consensus        97 ~~~~~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~  174 (294)
T 2rku_A           97 CRRRSLLELHKR-RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKV  174 (294)
T ss_dssp             CTTCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT-CCBCC
T ss_pred             CCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCc-ccccc
Confidence            996 55555543 3468999999999999999999999999999999999999999999999999998764322 22334


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                      ..+|..|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+.+..+.......                   
T Consensus       175 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------  234 (294)
T 2rku_A          175 LCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI-------------------  234 (294)
T ss_dssp             CCSCCSSCCHHHHTT-SCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCC-------------------
T ss_pred             ccCCCCcCCcchhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCC-------------------
Confidence            568999999999876 568899999999999999999999999988877766664321110                   


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCCCC
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPL  289 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~~~  289 (472)
                                 ...++..+.+||++||..||++|||+.|+|+|+||.....
T Consensus       235 -----------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~  274 (294)
T 2rku_A          235 -----------PKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI  274 (294)
T ss_dssp             -----------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred             -----------ccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCCc
Confidence                       1135678999999999999999999999999999976544


No 113
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=2e-42  Score=336.58  Aligned_cols=235  Identities=30%  Similarity=0.486  Sum_probs=198.0

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||++.... ........+.+|++++++++|+||+++++++..                .+.+||||||
T Consensus        32 ~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~   95 (284)
T 2vgo_A           32 LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD----------------RKRIYLMLEF   95 (284)
T ss_dssp             EEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC----------------SSEEEEEECC
T ss_pred             EEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc----------------CCEEEEEEEe
Confidence            36788899999999997543 223345678899999999999999999999986                5689999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      +++ +|.+++.+. ..+++..++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||++......   ....
T Consensus        96 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~  171 (284)
T 2vgo_A           96 APRGELYKELQKH-GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL---RRRT  171 (284)
T ss_dssp             CTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS---CBCC
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCccc---cccc
Confidence            986 777766543 36899999999999999999999999999999999999999999999999998765432   2234


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                      ..+|..|+|||++.+ ..++.++|||||||++|+|++|..||...+..+....+.......                   
T Consensus       172 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-------------------  231 (284)
T 2vgo_A          172 MCGTLDYLPPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF-------------------  231 (284)
T ss_dssp             CCSCGGGCCHHHHTT-CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCC-------------------
T ss_pred             ccCCCCcCCHHHhcc-CCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCC-------------------
Confidence            568999999999986 568899999999999999999999999988887777665432110                   


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                 ...++..+++||.+||..||++|||+.|+|+|+||+.
T Consensus       232 -----------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~  268 (284)
T 2vgo_A          232 -----------PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA  268 (284)
T ss_dssp             -----------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHH
T ss_pred             -----------CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHh
Confidence                       1236778999999999999999999999999999964


No 114
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=4.6e-42  Score=340.48  Aligned_cols=252  Identities=24%  Similarity=0.353  Sum_probs=187.5

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCC----------------------
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER----------------------   58 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~----------------------   58 (472)
                      +|++..+++.||||+++... .+.....+.+|+++|++|+|||||+++++|.+.....                      
T Consensus        24 ~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (332)
T 3qd2_B           24 EAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSP  102 (332)
T ss_dssp             EEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC---------------
T ss_pred             EEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCC
Confidence            47888999999999998654 2335567889999999999999999999987643210                      


Q ss_pred             -------------------CCCCCCCCCCcCCeEEEEEecCCC-ChhhhhcCCC--CCCCHHHHHHHHHHHHHHHHHHHH
Q 012062           59 -------------------DEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPG--LRFTVPQIKCYMKQLLTGLHYCHV  116 (472)
Q Consensus        59 -------------------~~~~~~~~~~~~~~~~iVmEy~~g-~l~~~~~~~~--~~l~~~~i~~i~~Qll~aL~~LH~  116 (472)
                                         ...........+..+|||||||++ +|.+++.+..  ...++..++.|+.||+.||+|||+
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~  182 (332)
T 3qd2_B          103 SPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS  182 (332)
T ss_dssp             -----------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHh
Confidence                               000000001223458999999996 6777666532  235666789999999999999999


Q ss_pred             CCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC-----------CccccccccCCCCChhhhcCCCCCCCCcchhh
Q 012062          117 NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN-----------NTLTNRVITLWYRPPELLLGATKYGPAVDMWS  185 (472)
Q Consensus       117 ~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~-----------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwS  185 (472)
                      ++|+||||||+||||+.++.+||+|||+++.......           ......++|+.|+|||++.+ ..++.++||||
T Consensus       183 ~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s  261 (332)
T 3qd2_B          183 KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHG-NNYSHKVDIFS  261 (332)
T ss_dssp             TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHC-CCCCTHHHHHH
T ss_pred             CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcC-CCCcchhhHHH
Confidence            9999999999999999999999999999987654321           22344578999999999987 57899999999


Q ss_pred             HHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhh
Q 012062          186 VGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKML  265 (472)
Q Consensus       186 lG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L  265 (472)
                      |||++|+|++|..++..  ....+..+...                             .....+...+..+++||.+||
T Consensus       262 lG~il~el~~~~~~~~~--~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~li~~~l  310 (332)
T 3qd2_B          262 LGLILFELLYSFSTQME--RVRIITDVRNL-----------------------------KFPLLFTQKYPQEHMMVQDML  310 (332)
T ss_dssp             HHHHHHHHHSCCCCHHH--HHHHHHHHHTT-----------------------------CCCHHHHHHCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhH--HHHHHHHhhcc-----------------------------CCCcccccCChhHHHHHHHHc
Confidence            99999999998655321  11111111110                             011223455678899999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCC
Q 012062          266 MLDPSQRISAKDALDSEYFW  285 (472)
Q Consensus       266 ~~dP~~R~t~~elL~h~~f~  285 (472)
                      ..||++|||+.|+|+|+||.
T Consensus       311 ~~~p~~Rps~~~~l~~~~f~  330 (332)
T 3qd2_B          311 SPSPTERPEATDIIENAIFE  330 (332)
T ss_dssp             CSSGGGSCCHHHHHHSTTCC
T ss_pred             cCCCCcCCCHHHHhhchhhh
Confidence            99999999999999999995


No 115
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=2e-42  Score=351.71  Aligned_cols=260  Identities=29%  Similarity=0.506  Sum_probs=202.3

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcC-CC-----CccceeEEeeCCCCCCCCCCCCCCCCcCCeEE
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ-HE-----NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTY   74 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~-hp-----nIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (472)
                      +|++..+++.||||+++...   .....+.+|+.+++.++ |+     +|+++++++..                .+.+|
T Consensus        72 ~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~----------------~~~~~  132 (382)
T 2vx3_A           72 KAYDRVEQEWVAIKIIKNKK---AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF----------------RNHLC  132 (382)
T ss_dssp             EEEETTTTEEEEEEEECSSH---HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE----------------TTEEE
T ss_pred             EEEEcCCCcEEEEEEEeccH---HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc----------------CCceE
Confidence            36788999999999997432   23456678999998885 55     49999999986                56899


Q ss_pred             EEEecCCCChhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHH--HCCccccCCCCCcEEEc--CCCCeEEeeccceeeec
Q 012062           75 MVFEYMDHDLTGLADRPG-LRFTVPQIKCYMKQLLTGLHYCH--VNQVLHRDIKGSNLLID--NEGNLKLADFGLARSFS  149 (472)
Q Consensus        75 iVmEy~~g~l~~~~~~~~-~~l~~~~i~~i~~Qll~aL~~LH--~~giiHrDLKp~NILl~--~~~~vkL~DFG~a~~~~  149 (472)
                      |||||++++|.+++.... ..+++..++.|+.||+.||.|||  +++|+||||||+||||+  .++.+||+|||+++...
T Consensus       133 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~  212 (382)
T 2vx3_A          133 LVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG  212 (382)
T ss_dssp             EEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred             EEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecc
Confidence            999999999988877643 45899999999999999999999  57999999999999995  46789999999998764


Q ss_pred             cCCCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCC
Q 012062          150 YDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK  229 (472)
Q Consensus       150 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  229 (472)
                      .    .....++|+.|+|||++.+ ..++.++||||||||||+|++|+.||.+.+..+.+..+.+..+.+....+.....
T Consensus       213 ~----~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  287 (382)
T 2vx3_A          213 Q----RIYQYIQSRFYRSPEVLLG-MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPK  287 (382)
T ss_dssp             C----CCCSSCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTT
T ss_pred             c----ccccccCCccccChHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHH
Confidence            2    2334678999999999987 5689999999999999999999999999999999999998877665443322111


Q ss_pred             -------CCc-----------cccCCCchhhhhhHHHHh------------------hhccHHHHHHHHHhhccCCCCCC
Q 012062          230 -------MPA-----------YNHFKPSRTMKRRVREVF------------------RHFDRHALELLEKMLMLDPSQRI  273 (472)
Q Consensus       230 -------~~~-----------~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~ll~~~L~~dP~~R~  273 (472)
                             ++.           ...+.+  .....+...+                  ...+.++++||++||+.||++||
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rp  365 (382)
T 2vx3_A          288 ARKFFEKLPDGTWNLKKTKDGKREYKP--PGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRI  365 (382)
T ss_dssp             HHHHEEECTTSCEEECCCCTTCCCSCC--TTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSC
T ss_pred             HHHHHHhccccccccccccccccccCC--cchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCC
Confidence                   000           000000  0001111111                  01224789999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 012062          274 SAKDALDSEYFWT  286 (472)
Q Consensus       274 t~~elL~h~~f~~  286 (472)
                      |++|||+|+||..
T Consensus       366 ta~e~L~hp~f~~  378 (382)
T 2vx3_A          366 QPYYALQHSFFKK  378 (382)
T ss_dssp             CHHHHTTSGGGCC
T ss_pred             CHHHHhcCccccc
Confidence            9999999999954


No 116
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=3.2e-42  Score=338.64  Aligned_cols=237  Identities=27%  Similarity=0.417  Sum_probs=196.0

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++.....  ....+.+|+.++++++|+||+++++++..                .+.+||||||+
T Consensus        27 ~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~   88 (304)
T 2jam_A           27 LVKQRLTGKLFALKCIKKSPAF--RDSSLENEIAVLKKIKHENIVTLEDIYES----------------TTHYYLVMQLV   88 (304)
T ss_dssp             EEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEEC----------------SSEEEEEECCC
T ss_pred             EEEECCCCCEEEEEEEeccccc--chHHHHHHHHHHHhCCCCCeeehhhhccc----------------CCEEEEEEEcC
Confidence            3678889999999999865322  23467899999999999999999999986                56899999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEE---cCCCCeEEeeccceeeeccCCCCcc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI---DNEGNLKLADFGLARSFSYDHNNTL  156 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl---~~~~~vkL~DFG~a~~~~~~~~~~~  156 (472)
                      ++ +|.+.+... ..+++.+++.++.||+.||+|||+++|+||||||+|||+   +.++.+||+|||++.....   ...
T Consensus        89 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~---~~~  164 (304)
T 2jam_A           89 SGGELFDRILER-GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN---GIM  164 (304)
T ss_dssp             CSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC---BTT
T ss_pred             CCccHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC---Ccc
Confidence            85 676666543 358999999999999999999999999999999999999   6788899999999865432   123


Q ss_pred             ccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccC
Q 012062          157 TNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF  236 (472)
Q Consensus       157 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  236 (472)
                      ...++|..|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+.+..+.+........              
T Consensus       165 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--------------  229 (304)
T 2jam_A          165 STACGTPGYVAPEVLAQ-KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESP--------------  229 (304)
T ss_dssp             HHHHSCCCBCCTTTBSS-CSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTT--------------
T ss_pred             ccccCCCCccChHHhcc-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCcc--------------
Confidence            33468999999999876 568899999999999999999999999999888888776643322211              


Q ss_pred             CCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          237 KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                  .+..++.++++||.+||..||++|||+.|+|+|+||..
T Consensus       230 ------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  267 (304)
T 2jam_A          230 ------------FWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDG  267 (304)
T ss_dssp             ------------TTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHS
T ss_pred             ------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccC
Confidence                        12246778999999999999999999999999999964


No 117
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=1.3e-42  Score=353.15  Aligned_cols=264  Identities=26%  Similarity=0.429  Sum_probs=201.5

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcC--------CCCccceeEEeeCCCCCCCCCCCCCCCCcCCe
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ--------HENVIKLKEIVTSPGPERDEQGRPDGNKYRGS   72 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~--------hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (472)
                      +|++..+++.||||+++...   .....+.+|+++|+.++        |+||++++++|...+.            ....
T Consensus        55 ~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~------------~~~~  119 (397)
T 1wak_A           55 LSWDIQGKKFVAMKVVKSAE---HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV------------NGTH  119 (397)
T ss_dssp             EEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET------------TEEE
T ss_pred             EEEecCCCeEEEEEEEecCC---cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC------------CCce
Confidence            47888999999999997432   23456789999999996        7889999999974211            1457


Q ss_pred             EEEEEecCCCChhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEcCCC---------------
Q 012062           73 TYMVFEYMDHDLTGLADRPG-LRFTVPQIKCYMKQLLTGLHYCHVN-QVLHRDIKGSNLLIDNEG---------------  135 (472)
Q Consensus        73 ~~iVmEy~~g~l~~~~~~~~-~~l~~~~i~~i~~Qll~aL~~LH~~-giiHrDLKp~NILl~~~~---------------  135 (472)
                      +||||||+.++++..+.+.. ..+++.+++.|+.||+.||+|||++ ||+||||||+||||+.++               
T Consensus       120 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~  199 (397)
T 1wak_A          120 ICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQR  199 (397)
T ss_dssp             EEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC----
T ss_pred             EEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhh
Confidence            89999999998888776543 5699999999999999999999998 999999999999998775               


Q ss_pred             ----------------------------------CeEEeeccceeeeccCCCCccccccccCCCCChhhhcCCCCCCCCc
Q 012062          136 ----------------------------------NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAV  181 (472)
Q Consensus       136 ----------------------------------~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~  181 (472)
                                                        .+||+|||+++....    .....++|+.|+|||++.+ ..++.++
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~  274 (397)
T 1wak_A          200 SGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK----HFTEDIQTRQYRSLEVLIG-SGYNTPA  274 (397)
T ss_dssp             -----------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB----CSCSCCSCGGGCCHHHHHT-SCCCTHH
T ss_pred             cCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc----cCccCCCCCcccCChhhcC-CCCCcHH
Confidence                                              799999999987543    2344578999999999987 5689999


Q ss_pred             chhhHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHhcCCCCCCCCc----------cCCCCCccccCCCchhhhhh
Q 012062          182 DMWSVGCIFAELLNGKPILPGKN------EAEQLSKIFELCGSPDETIWP----------GVSKMPAYNHFKPSRTMKRR  245 (472)
Q Consensus       182 DiwSlG~il~ell~G~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~  245 (472)
                      ||||||||||+|++|+.||...+      ..+.+..+.+..+.++...+.          ............+.. ....
T Consensus       275 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  353 (397)
T 1wak_A          275 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWG-LFEV  353 (397)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCC-HHHH
T ss_pred             HHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcc-hhHh
Confidence            99999999999999999998765      566677777766665432211          111111111111100 0000


Q ss_pred             HH---HHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCC
Q 012062          246 VR---EVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFW  285 (472)
Q Consensus       246 ~~---~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~  285 (472)
                      ..   ......+..+++||.+||..||++|||+.|||+|+||.
T Consensus       354 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          354 LVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             HHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             hhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence            11   11234567899999999999999999999999999994


No 118
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=5.1e-42  Score=362.55  Aligned_cols=238  Identities=24%  Similarity=0.365  Sum_probs=195.7

Q ss_pred             CceeccCCCEEEEEEeecCCc-CCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|+++.||+.||||+++.... .......+.+|+++|++++|+||++++++|..                ...+||||||
T Consensus       203 ~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~----------------~~~l~lVmE~  266 (543)
T 3c4z_A          203 ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET----------------KTDLCLVMTI  266 (543)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC----------------SSEEEEEECC
T ss_pred             EEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee----------------CCEEEEEEEe
Confidence            478889999999999976532 22345678899999999999999999999987                5689999999


Q ss_pred             CCC-ChhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCc
Q 012062           80 MDH-DLTGLADRP---GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNT  155 (472)
Q Consensus        80 ~~g-~l~~~~~~~---~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~  155 (472)
                      +++ +|..++...   ...+++..++.|+.||+.||+|||++||+||||||+||||+.++++||+|||+++.+.... ..
T Consensus       267 ~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~-~~  345 (543)
T 3c4z_A          267 MNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-TK  345 (543)
T ss_dssp             CTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC-CC
T ss_pred             ccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCC-cc
Confidence            996 666665442   3469999999999999999999999999999999999999999999999999998765332 22


Q ss_pred             cccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCC----hHHHHHHHHHhcCCCCCCCCccCCCCC
Q 012062          156 LTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKN----EAEQLSKIFELCGSPDETIWPGVSKMP  231 (472)
Q Consensus       156 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~  231 (472)
                      ....+||+.|+|||++.+ ..++.++||||||||+|+|++|+.||.+.+    ..+....+.......            
T Consensus       346 ~~~~~GT~~Y~APE~l~~-~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~------------  412 (543)
T 3c4z_A          346 TKGYAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTY------------  412 (543)
T ss_dssp             BCCCCSCTTTSCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCC------------
T ss_pred             cccccCCccccChhhhcC-CCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCC------------
Confidence            334589999999999987 678999999999999999999999998764    234444443321110            


Q ss_pred             ccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCC-----HHHHhcCCCCCC
Q 012062          232 AYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRIS-----AKDALDSEYFWT  286 (472)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t-----~~elL~h~~f~~  286 (472)
                                        ...++..+++||++||..||++|++     ++||++|+||..
T Consensus       413 ------------------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~  454 (543)
T 3c4z_A          413 ------------------PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD  454 (543)
T ss_dssp             ------------------CTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTT
T ss_pred             ------------------CcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccC
Confidence                              1246788999999999999999995     589999999964


No 119
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=1.2e-41  Score=338.14  Aligned_cols=261  Identities=32%  Similarity=0.530  Sum_probs=194.2

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcC-CCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ-HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||+++..     ....+.+|+++|++|+ |+||+++++++....              ...++|||||
T Consensus        54 ~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~--------------~~~~~lv~e~  114 (330)
T 3nsz_A           54 EAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPV--------------SRTPALVFEH  114 (330)
T ss_dssp             EEEETTTCCEEEEEEECSC-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTT--------------TCCEEEEEEC
T ss_pred             EEEECCCCcEEEEEEeccc-----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCC--------------CCceEEEEec
Confidence            3678899999999999743     2456889999999997 999999999998632              4568999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCC-CeEEeeccceeeeccCCCCccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG-NLKLADFGLARSFSYDHNNTLT  157 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~-~vkL~DFG~a~~~~~~~~~~~~  157 (472)
                      +.+ +|..++.    .+++.+++.++.||+.||+|||++||+||||||+||||+.++ .+||+|||+++.+....  ...
T Consensus       115 ~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~  188 (330)
T 3nsz_A          115 VNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--EYN  188 (330)
T ss_dssp             CCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC--CCC
T ss_pred             cCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC--ccc
Confidence            996 5555543    389999999999999999999999999999999999999777 79999999998764332  334


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCC-CCChHHHHHHHHHhcCCCCCCCCccCCC---CCcc
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILP-GKNEAEQLSKIFELCGSPDETIWPGVSK---MPAY  233 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~  233 (472)
                      ..++|..|+|||++.+...++.++||||||||+|+|++|+.||. +.+..+.+..+.+..+......+-....   .+.+
T Consensus       189 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (330)
T 3nsz_A          189 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF  268 (330)
T ss_dssp             SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHH
T ss_pred             cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccch
Confidence            45789999999999875678999999999999999999998884 4555666665554433211000000000   0000


Q ss_pred             c----cCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          234 N----HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       234 ~----~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      .    ..................++.++++||++||..||++|||++|||+|+||+.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  325 (330)
T 3nsz_A          269 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT  325 (330)
T ss_dssp             HHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             hhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhh
Confidence            0    0000000000001112347889999999999999999999999999999964


No 120
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=4.2e-42  Score=353.78  Aligned_cols=241  Identities=29%  Similarity=0.456  Sum_probs=183.7

Q ss_pred             CceeccCCCEEEEEEeecCCcC------CCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEE
Q 012062            1 MAREIKTGEIVALKKIRMDNEK------EGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTY   74 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~------~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (472)
                      +|++..+++.||||++......      ......+.+|+++|++|+||||+++++++..                 ..+|
T Consensus       153 ~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-----------------~~~~  215 (419)
T 3i6u_A          153 LAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-----------------EDYY  215 (419)
T ss_dssp             EEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-----------------SEEE
T ss_pred             EEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-----------------CceE
Confidence            4788999999999999764311      1223457899999999999999999999863                 3579


Q ss_pred             EEEecCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCC---CeEEeeccceeeecc
Q 012062           75 MVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG---NLKLADFGLARSFSY  150 (472)
Q Consensus        75 iVmEy~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~---~vkL~DFG~a~~~~~  150 (472)
                      ||||||.+ +|.+.+.. ...+++.+++.|+.||+.||+|||+++|+||||||+||||+.++   .+||+|||+++....
T Consensus       216 lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~  294 (419)
T 3i6u_A          216 IVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE  294 (419)
T ss_dssp             EEEECCTTCBGGGGTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-
T ss_pred             EEEEcCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCC
Confidence            99999986 56565554 44799999999999999999999999999999999999997654   499999999976543


Q ss_pred             CCCCccccccccCCCCChhhhcC--CCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCC
Q 012062          151 DHNNTLTNRVITLWYRPPELLLG--ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVS  228 (472)
Q Consensus       151 ~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  228 (472)
                      .  ......++|+.|+|||++.+  ...++.++|||||||++|+|++|+.||........+...+.....          
T Consensus       295 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~----------  362 (419)
T 3i6u_A          295 T--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY----------  362 (419)
T ss_dssp             ------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCC----------
T ss_pred             C--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCC----------
Confidence            2  23345678999999999863  345788999999999999999999999876543333222211100          


Q ss_pred             CCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          229 KMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                     ......+..+++.+++||++||..||++|||++|+|+|+||..
T Consensus       363 ---------------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          363 ---------------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             ---------------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             ---------------CCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence                           0112345568889999999999999999999999999999943


No 121
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=1.3e-42  Score=368.33  Aligned_cols=237  Identities=25%  Similarity=0.421  Sum_probs=194.9

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|+++.|++.||||+++... ........+++|+.+|+.++|+|||+++++|.+                .+.+||||||
T Consensus       202 ~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~----------------~~~l~lVmEy  265 (576)
T 2acx_A          202 ACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET----------------KDALCLVLTL  265 (576)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC----------------SSEEEEEECC
T ss_pred             EEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee----------------CCEEEEEEEc
Confidence            47788999999999997653 223345567899999999999999999999987                5689999999


Q ss_pred             CCC-ChhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccc
Q 012062           80 MDH-DLTGLADRPG-LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT  157 (472)
Q Consensus        80 ~~g-~l~~~~~~~~-~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~  157 (472)
                      +.+ +|..++.... ..+++..++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+++.+...  ....
T Consensus       266 ~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~--~~~~  343 (576)
T 2acx_A          266 MNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG--QTIK  343 (576)
T ss_dssp             CCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT--CCEE
T ss_pred             CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccC--cccc
Confidence            985 6666665432 34999999999999999999999999999999999999999999999999999876432  2334


Q ss_pred             cccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCCh----HHHHHHHHHhcCCCCCCCCccCCCCCcc
Q 012062          158 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNE----AEQLSKIFELCGSPDETIWPGVSKMPAY  233 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~  233 (472)
                      ..+||+.|+|||++.+ ..++.++||||||||+|+|++|+.||...+.    ......+......               
T Consensus       344 ~~~GT~~Y~APEvl~~-~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~---------------  407 (576)
T 2acx_A          344 GRVGTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE---------------  407 (576)
T ss_dssp             CCCSCGGGCCHHHHTT-CEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCC---------------
T ss_pred             ccCCCccccCHHHHcC-CCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccccc---------------
Confidence            4689999999999986 5689999999999999999999999987643    2233333221100               


Q ss_pred             ccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCC-----CHHHHhcCCCCCC
Q 012062          234 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRI-----SAKDALDSEYFWT  286 (472)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~-----t~~elL~h~~f~~  286 (472)
                                     +...++.++++||++||..||++|+     +++||++|+||..
T Consensus       408 ---------------~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~  450 (576)
T 2acx_A          408 ---------------YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK  450 (576)
T ss_dssp             ---------------CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred             ---------------CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence                           0124678999999999999999999     8999999999964


No 122
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=5e-42  Score=338.49  Aligned_cols=237  Identities=24%  Similarity=0.388  Sum_probs=197.1

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++...    ....+.+|++++++++|+||+++++++..                .+.+||||||+
T Consensus        47 ~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~  106 (314)
T 3com_A           47 KAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFK----------------NTDLWIVMEYC  106 (314)
T ss_dssp             EEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEE----------------TTEEEEEEECC
T ss_pred             EEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEe----------------CCEEEEEeecC
Confidence            36788899999999998643    24568899999999999999999999986                56789999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR  159 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~  159 (472)
                      ++ +|.+++......+++.+++.++.||+.||.|||++||+|+||||+||||+.++.+||+|||++....... ......
T Consensus       107 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~  185 (314)
T 3com_A          107 GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM-AKRNTV  185 (314)
T ss_dssp             TTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB-SCBCCC
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc-cccCcc
Confidence            87 6777665445579999999999999999999999999999999999999999999999999998765332 223345


Q ss_pred             cccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCc
Q 012062          160 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS  239 (472)
Q Consensus       160 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (472)
                      .+|..|+|||++.+ ..++.++|||||||++|+|++|+.||...+....+..+........                   
T Consensus       186 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------  245 (314)
T 3com_A          186 IGTPFWMAPEVIQE-IGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTF-------------------  245 (314)
T ss_dssp             CSCGGGCCHHHHSS-SCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC-------------------
T ss_pred             CCCCCccChhhcCC-CCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCccc-------------------
Confidence            78999999999876 5689999999999999999999999998887666554433211000                   


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                              .....++..+.+||.+||..||++|||+.|+|+|+||..
T Consensus       246 --------~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~  284 (314)
T 3com_A          246 --------RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRS  284 (314)
T ss_dssp             --------SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHT
T ss_pred             --------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhc
Confidence                    001246778999999999999999999999999999964


No 123
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=4e-42  Score=350.70  Aligned_cols=239  Identities=28%  Similarity=0.411  Sum_probs=187.2

Q ss_pred             ceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcC--CCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            2 AREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ--HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~--hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      |++. +++.||||+++...........+.+|+.+|++|+  |+|||++++++..                .+.+|||||+
T Consensus        75 ~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~----------------~~~~~lv~E~  137 (390)
T 2zmd_A           75 VLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT----------------DQYIYMVMEC  137 (390)
T ss_dssp             EECT-TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC----------------SSEEEEEEEC
T ss_pred             EEcC-CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec----------------CCEEEEEEec
Confidence            4454 4899999999876554445567889999999997  5999999999986                5579999997


Q ss_pred             CCCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC-Ccccc
Q 012062           80 MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN-NTLTN  158 (472)
Q Consensus        80 ~~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~-~~~~~  158 (472)
                      ..++|.+++.+.. .+++.+++.|+.||+.||+|||+++|+||||||+||||+ ++.+||+|||+++.+..... .....
T Consensus       138 ~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~  215 (390)
T 2zmd_A          138 GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDS  215 (390)
T ss_dssp             CSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---------CC
T ss_pred             CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCCC
Confidence            7778888776543 689999999999999999999999999999999999996 57899999999987653322 12345


Q ss_pred             ccccCCCCChhhhcCC----------CCCCCCcchhhHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCCCCCCccC
Q 012062          159 RVITLWYRPPELLLGA----------TKYGPAVDMWSVGCIFAELLNGKPILPGKNE-AEQLSKIFELCGSPDETIWPGV  227 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~----------~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~  227 (472)
                      .++|+.|+|||++.+.          ..++.++||||||||||+|++|+.||..... ...+..+.......   .++  
T Consensus       216 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~---~~~--  290 (390)
T 2zmd_A          216 QVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI---EFP--  290 (390)
T ss_dssp             SCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCC---CCC--
T ss_pred             CCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccC---CCC--
Confidence            6789999999998651          3578899999999999999999999987643 34444443211110   000  


Q ss_pred             CCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          228 SKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                                             ...+.++++||++||..||++|||+.|||+|+||...
T Consensus       291 -----------------------~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          291 -----------------------DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             -----------------------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             -----------------------ccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence                                   1235679999999999999999999999999999654


No 124
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=3.6e-42  Score=344.70  Aligned_cols=239  Identities=28%  Similarity=0.434  Sum_probs=185.6

Q ss_pred             ceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCC--CCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            2 AREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQH--ENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~h--pnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      |++ .+++.||||+++...........+.+|+.+|++|+|  +||+++++++..                ...+|||||+
T Consensus        28 ~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~----------------~~~~~lv~e~   90 (343)
T 3dbq_A           28 VLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT----------------DQYIYMVMEC   90 (343)
T ss_dssp             EEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC----------------SSEEEEEECC
T ss_pred             EEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee----------------CCEEEEEEeC
Confidence            344 578999999998765544445678899999999986  999999999986                5689999998


Q ss_pred             CCCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC-cccc
Q 012062           80 MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN-TLTN  158 (472)
Q Consensus        80 ~~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~-~~~~  158 (472)
                      ..++|.+++... ..+++.+++.|+.||+.||+|||+++|+||||||+||||+ ++.+||+|||+++.+...... ....
T Consensus        91 ~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~  168 (343)
T 3dbq_A           91 GNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDS  168 (343)
T ss_dssp             CSEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----------
T ss_pred             CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcccccccCCC
Confidence            888888887664 3689999999999999999999999999999999999997 578999999999876533222 2334


Q ss_pred             ccccCCCCChhhhcC----------CCCCCCCcchhhHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCCCCCCccC
Q 012062          159 RVITLWYRPPELLLG----------ATKYGPAVDMWSVGCIFAELLNGKPILPGKNE-AEQLSKIFELCGSPDETIWPGV  227 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~----------~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~  227 (472)
                      .++|+.|+|||++.+          ...++.++||||||||+|+|++|+.||..... ...+..+....   ....++  
T Consensus       169 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~---~~~~~~--  243 (343)
T 3dbq_A          169 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN---HEIEFP--  243 (343)
T ss_dssp             -CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTT---SCCCCC--
T ss_pred             CcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCC---cccCCc--
Confidence            578999999999864          24578899999999999999999999987543 23333332211   110000  


Q ss_pred             CCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          228 SKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                                             ...+.++.+||.+||..||++|||+.|+|+|+||...
T Consensus       244 -----------------------~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          244 -----------------------DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             -----------------------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             -----------------------ccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccccc
Confidence                                   1235679999999999999999999999999999654


No 125
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=5.2e-42  Score=334.74  Aligned_cols=241  Identities=22%  Similarity=0.301  Sum_probs=193.6

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||+|+++...........+.+|+.+|++++|+||+++++++....            .....+||||||+
T Consensus        44 ~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------------~~~~~~~lv~e~~  111 (290)
T 1t4h_A           44 KGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV------------KGKKCIVLVTELM  111 (290)
T ss_dssp             EEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES------------SSCEEEEEEEECC
T ss_pred             EeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc------------CCCceEEEEEEec
Confidence            3678899999999999866544445567889999999999999999999987521            1145789999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEEc-CCCCeEEeeccceeeeccCCCCcc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ--VLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTL  156 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~g--iiHrDLKp~NILl~-~~~~vkL~DFG~a~~~~~~~~~~~  156 (472)
                      ++ +|.+++.+. ..+++..++.|+.||+.||+|||+++  |+||||||+||||+ .++.+||+|||++.....   ...
T Consensus       112 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~---~~~  187 (290)
T 1t4h_A          112 TSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA---SFA  187 (290)
T ss_dssp             CSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT---TSB
T ss_pred             CCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc---ccc
Confidence            86 666666543 46899999999999999999999999  99999999999998 788999999999865432   223


Q ss_pred             ccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccC
Q 012062          157 TNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF  236 (472)
Q Consensus       157 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  236 (472)
                      ....+|+.|+|||++.+  .++.++|||||||++|+|++|+.||........+.........+                 
T Consensus       188 ~~~~~t~~y~aPE~~~~--~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-----------------  248 (290)
T 1t4h_A          188 KAVIGTPEFMAPEMYEE--KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP-----------------  248 (290)
T ss_dssp             EESCSSCCCCCGGGGGT--CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC-----------------
T ss_pred             ccccCCcCcCCHHHHhc--cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCc-----------------
Confidence            34568999999998864  58999999999999999999999998866655544433211100                 


Q ss_pred             CCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          237 KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                .......+.++.+||.+||..||++|||+.|||+|+||..
T Consensus       249 ----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          249 ----------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             ----------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             ----------cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence                      0112235678999999999999999999999999999964


No 126
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=7.9e-42  Score=331.84  Aligned_cols=239  Identities=26%  Similarity=0.423  Sum_probs=196.1

Q ss_pred             CceeccCCCEEEEEEeecCCcCC----CchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEE
Q 012062            1 MAREIKTGEIVALKKIRMDNEKE----GFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMV   76 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~----~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iV   76 (472)
                      +|++..+++.||||+++......    .....+.+|+.++++++|+||+++++++..                ...+|||
T Consensus        23 ~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv   86 (283)
T 3bhy_A           23 KCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN----------------KTDVVLI   86 (283)
T ss_dssp             EEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC----------------SSEEEEE
T ss_pred             EEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC----------------CCeEEEE
Confidence            36788899999999998654322    235678899999999999999999999986                5678999


Q ss_pred             EecCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCC----CeEEeeccceeeeccC
Q 012062           77 FEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG----NLKLADFGLARSFSYD  151 (472)
Q Consensus        77 mEy~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~----~vkL~DFG~a~~~~~~  151 (472)
                      |||+.+ +|.+++.. ...+++.+++.++.||+.||+|||+++|+||||||+|||++.++    .+||+|||++......
T Consensus        87 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~  165 (283)
T 3bhy_A           87 LELVSGGELFDFLAE-KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG  165 (283)
T ss_dssp             EECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--
T ss_pred             EeecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCC
Confidence            999975 66666644 34689999999999999999999999999999999999998877    7999999999876432


Q ss_pred             CCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCC
Q 012062          152 HNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMP  231 (472)
Q Consensus       152 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  231 (472)
                      .  ......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+.......            
T Consensus       166 ~--~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------------  230 (283)
T 3bhy_A          166 N--EFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF------------  230 (283)
T ss_dssp             --------CCCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCC------------
T ss_pred             C--cccccCCCcCccCcceecC-CCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCC------------
Confidence            2  2334568999999999876 568999999999999999999999999998887777665432111            


Q ss_pred             ccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCC
Q 012062          232 AYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFW  285 (472)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~  285 (472)
                                    ....+..++..+.+||++||..||++|||+.|+|+|+||.
T Consensus       231 --------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~  270 (283)
T 3bhy_A          231 --------------DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK  270 (283)
T ss_dssp             --------------CHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHH
T ss_pred             --------------cchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHH
Confidence                          1233456788999999999999999999999999999993


No 127
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=1.2e-41  Score=333.74  Aligned_cols=240  Identities=25%  Similarity=0.358  Sum_probs=191.6

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||++.....  .....+.+|+++++.++|+||+++++++..                .+.+||||||+
T Consensus        37 ~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~   98 (302)
T 2j7t_A           37 KAKNKETGALAAAKVIETKSE--EELEDYIVEIEILATCDHPYIVKLLGAYYH----------------DGKLWIMIEFC   98 (302)
T ss_dssp             EEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC----------------C-CEEEEEECC
T ss_pred             EEEEcCCCcEEEEEEecCCCH--HHHHHHHHHHHHHhcCCCCCEeeeeeeeee----------------CCeEEEEEEeC
Confidence            367888999999999975532  235678899999999999999999999986                55789999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR  159 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~  159 (472)
                      ++ +|..++......+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++....... ......
T Consensus        99 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~  177 (302)
T 2j7t_A           99 PGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-QKRDSF  177 (302)
T ss_dssp             TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-HC----
T ss_pred             CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccc-cccccc
Confidence            87 5555555445569999999999999999999999999999999999999999999999999875432111 112234


Q ss_pred             cccCCCCChhhhc----CCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCcccc
Q 012062          160 VITLWYRPPELLL----GATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNH  235 (472)
Q Consensus       160 ~gt~~y~aPE~l~----~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  235 (472)
                      .+|..|+|||++.    ....++.++|||||||++|+|++|..||...+..+.+..+........               
T Consensus       178 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---------------  242 (302)
T 2j7t_A          178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL---------------  242 (302)
T ss_dssp             -CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC---------------
T ss_pred             cCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCccc---------------
Confidence            6799999999984    235688999999999999999999999999888777766654321100               


Q ss_pred             CCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          236 FKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                  .....++..+.+||.+||..||++|||+.|+++|+||..
T Consensus       243 ------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~  281 (302)
T 2j7t_A          243 ------------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSS  281 (302)
T ss_dssp             ------------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTT
T ss_pred             ------------CCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhh
Confidence                        001246778999999999999999999999999999954


No 128
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=9e-42  Score=333.94  Aligned_cols=241  Identities=26%  Similarity=0.428  Sum_probs=199.0

Q ss_pred             CceeccCCCEEEEEEeecCCcCC-------CchhhHHHHHHHHHhcC-CCCccceeEEeeCCCCCCCCCCCCCCCCcCCe
Q 012062            1 MAREIKTGEIVALKKIRMDNEKE-------GFPITAIREIKILKKLQ-HENVIKLKEIVTSPGPERDEQGRPDGNKYRGS   72 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~-------~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (472)
                      +|+++.+++.||||+++......       .....+.+|+++++++. |+||+++++++..                .+.
T Consensus        35 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~----------------~~~   98 (298)
T 1phk_A           35 RCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET----------------NTF   98 (298)
T ss_dssp             EEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC----------------SSE
T ss_pred             EEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc----------------CCe
Confidence            36788999999999998654211       22355678999999996 9999999999986                568


Q ss_pred             EEEEEecCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccC
Q 012062           73 TYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYD  151 (472)
Q Consensus        73 ~~iVmEy~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~  151 (472)
                      +||||||+++ +|.+++.. ...+++.+++.++.||+.||+|||++||+|+||||+|||++.++.+||+|||++..+...
T Consensus        99 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  177 (298)
T 1phk_A           99 FFLVFDLMKKGELFDYLTE-KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG  177 (298)
T ss_dssp             EEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred             EEEEEeccCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCCC
Confidence            9999999985 67666654 346899999999999999999999999999999999999999999999999999876532


Q ss_pred             CCCccccccccCCCCChhhhcC-----CCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCcc
Q 012062          152 HNNTLTNRVITLWYRPPELLLG-----ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPG  226 (472)
Q Consensus       152 ~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  226 (472)
                        .......+|..|+|||++.+     ...++.++|||||||++|+|++|+.||...+..+....+..........    
T Consensus       178 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----  251 (298)
T 1phk_A          178 --EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP----  251 (298)
T ss_dssp             --CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT----
T ss_pred             --cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcc----
Confidence              23344578999999999852     3457889999999999999999999999988888777776543222111    


Q ss_pred             CCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          227 VSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                            .+..++..+.+||.+||..||++|||+.|+|+|+||..
T Consensus       252 ----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (298)
T 1phk_A          252 ----------------------EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  289 (298)
T ss_dssp             ----------------------TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             ----------------------cccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhh
Confidence                                  12356788999999999999999999999999999954


No 129
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=3.5e-42  Score=334.03  Aligned_cols=233  Identities=21%  Similarity=0.229  Sum_probs=187.8

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||+++...........+++|+.++..+ +||||+++++++..                .+.+||||||
T Consensus        29 ~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~----------------~~~~~lv~e~   92 (289)
T 1x8b_A           29 KCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE----------------DDHMLIQNEY   92 (289)
T ss_dssp             EEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE----------------TTEEEEEEEC
T ss_pred             EEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec----------------CCeEEEEEEe
Confidence            367888999999999987655554567788999999999 89999999999987                5689999999


Q ss_pred             CCC-ChhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCC-------------------CC
Q 012062           80 MDH-DLTGLADRP---GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE-------------------GN  136 (472)
Q Consensus        80 ~~g-~l~~~~~~~---~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~-------------------~~  136 (472)
                      +++ +|.+++...   ...+++.+++.|+.||+.||+|||+++|+||||||+||||+.+                   ..
T Consensus        93 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~  172 (289)
T 1x8b_A           93 CNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVM  172 (289)
T ss_dssp             CTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCC
T ss_pred             cCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceE
Confidence            986 777776542   2458999999999999999999999999999999999999844                   47


Q ss_pred             eEEeeccceeeeccCCCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc
Q 012062          137 LKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELC  216 (472)
Q Consensus       137 vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~  216 (472)
                      +||+|||++......     ....+|..|+|||++.+...++.++|||||||++|+|++|.+++...+.   ...+....
T Consensus       173 ~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---~~~~~~~~  244 (289)
T 1x8b_A          173 FKIGDLGHVTRISSP-----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---WHEIRQGR  244 (289)
T ss_dssp             EEECCCTTCEETTCS-----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH---HHHHHTTC
T ss_pred             EEEcccccccccCCc-----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH---HHHHHcCC
Confidence            999999999876432     2235899999999998754667899999999999999999987755432   22222211


Q ss_pred             CCCCCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          217 GSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      .       +                      .....++.++.+||.+||..||++|||+.|+|+|+||..
T Consensus       245 ~-------~----------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  285 (289)
T 1x8b_A          245 L-------P----------------------RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS  285 (289)
T ss_dssp             C-------C----------------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC--
T ss_pred             C-------C----------------------CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhh
Confidence            0       0                      011246778999999999999999999999999999954


No 130
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=5.4e-42  Score=336.00  Aligned_cols=240  Identities=23%  Similarity=0.356  Sum_probs=188.3

Q ss_pred             CceeccCCCEEEEEEeecCCc-CCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||++..... .......+.+|+.++++++||||+++++++..                .+.+||||||
T Consensus        29 ~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~----------------~~~~~lv~e~   92 (294)
T 4eqm_A           29 LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE----------------DDCYYLVMEY   92 (294)
T ss_dssp             EEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEEC----------------SSEEEEEEEC
T ss_pred             EEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeee----------------CCeEEEEEeC
Confidence            478889999999999976533 23345677899999999999999999999986                6689999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      +++ +|.+++.+. ..+++.+++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++.+..........
T Consensus        93 ~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  171 (294)
T 4eqm_A           93 IEGPTLSEYIESH-GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNH  171 (294)
T ss_dssp             CCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----------
T ss_pred             CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCc
Confidence            986 666666543 369999999999999999999999999999999999999999999999999997665443334445


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                      .++|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+...+......                     
T Consensus       172 ~~gt~~y~aPE~~~~-~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~---------------------  229 (294)
T 4eqm_A          172 VLGTVQYFSPEQAKG-EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSV---------------------  229 (294)
T ss_dssp             ---CCSSCCHHHHHT-CCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCC---------------------
T ss_pred             cccCccccCHhHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccC---------------------
Confidence            678999999999987 5689999999999999999999999999888776655543210                     


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCC
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEY  283 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~  283 (472)
                          ..........++..+.+||.+||..||++|++..+.+.+.|
T Consensus       230 ----~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l  270 (294)
T 4eqm_A          230 ----PNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDL  270 (294)
T ss_dssp             ----CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHH
T ss_pred             ----CCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHH
Confidence                00112233467889999999999999999995555444444


No 131
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=1.1e-41  Score=334.43  Aligned_cols=242  Identities=27%  Similarity=0.404  Sum_probs=197.2

Q ss_pred             ceeccCCCEEEEEEeecCCc--CCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            2 AREIKTGEIVALKKIRMDNE--KEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~--~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      |++..+++.||||+++....  .......+.+|++++++++|+||+++++++....              ...+||||||
T Consensus        24 ~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--------------~~~~~lv~e~   89 (305)
T 2wtk_C           24 VLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEE--------------KQKMYMVMEY   89 (305)
T ss_dssp             EEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-----------------CEEEEEEC
T ss_pred             EEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC--------------CCeEEEEehh
Confidence            67888999999999976531  1234567889999999999999999999986421              4578999999


Q ss_pred             CCCChhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCC-CCccc
Q 012062           80 MDHDLTGLADR-PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDH-NNTLT  157 (472)
Q Consensus        80 ~~g~l~~~~~~-~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~-~~~~~  157 (472)
                      +++++.+++.. ....+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||++....... .....
T Consensus        90 ~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~  169 (305)
T 2wtk_C           90 CVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR  169 (305)
T ss_dssp             CSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEEC
T ss_pred             ccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCccccccccc
Confidence            99887766554 34569999999999999999999999999999999999999999999999999998764322 22333


Q ss_pred             cccccCCCCChhhhcCCC-CCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccC
Q 012062          158 NRVITLWYRPPELLLGAT-KYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF  236 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~~~-~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  236 (472)
                      ...+|..|+|||++.+.. .++.++|||||||++|+|++|+.||.+.+..+.+..+.......                 
T Consensus       170 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~-----------------  232 (305)
T 2wtk_C          170 TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAI-----------------  232 (305)
T ss_dssp             CCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC-----------------
T ss_pred             cCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCC-----------------
Confidence            456899999999987532 24678999999999999999999999988877777665432111                 


Q ss_pred             CCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          237 KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                                   ...++..+.+||++||..||++|||+.|+++|+||...
T Consensus       233 -------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~  270 (305)
T 2wtk_C          233 -------------PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKK  270 (305)
T ss_dssp             -------------CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSC
T ss_pred             -------------CCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccC
Confidence                         11356789999999999999999999999999999653


No 132
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=3.9e-42  Score=332.79  Aligned_cols=237  Identities=30%  Similarity=0.441  Sum_probs=189.1

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||+++... ........+.+|+.+++.++|+||+++++++..                .+.+||||||
T Consensus        29 ~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~   92 (276)
T 2h6d_A           29 IGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST----------------PTDFFMVMEY   92 (276)
T ss_dssp             EEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC----------------SSEEEEEEEC
T ss_pred             EEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec----------------CCeEEEEEec
Confidence            36778899999999997643 223345678899999999999999999999986                5679999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      +.+ +|.+++... ..+++.+++.++.||+.||+|||+++|+|+||||+|||++.++.+||+|||++......  .....
T Consensus        93 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~  169 (276)
T 2h6d_A           93 VSGGELFDYICKH-GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRT  169 (276)
T ss_dssp             CCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--------
T ss_pred             cCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCC--cceec
Confidence            985 676666543 36899999999999999999999999999999999999999999999999998765432  22234


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                      ..+|..|+|||++.+....+.++|||||||++|+|++|+.||...+....+..+.......                   
T Consensus       170 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------  230 (276)
T 2h6d_A          170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYI-------------------  230 (276)
T ss_dssp             -------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-------------------
T ss_pred             ccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccC-------------------
Confidence            5679999999999874444689999999999999999999999888777776665422111                   


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                 ...++..+.+||.+||..||++|||+.|+++|+||+.
T Consensus       231 -----------~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~  267 (276)
T 2h6d_A          231 -----------PEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ  267 (276)
T ss_dssp             -----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHT
T ss_pred             -----------chhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhcc
Confidence                       0135678999999999999999999999999999965


No 133
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.3e-42  Score=348.02  Aligned_cols=235  Identities=25%  Similarity=0.424  Sum_probs=187.7

Q ss_pred             ccCCCEEEEEEeecCCc--CCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCC
Q 012062            5 IKTGEIVALKKIRMDNE--KEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD   81 (472)
Q Consensus         5 ~~tg~~vAlK~i~~~~~--~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~   81 (472)
                      ..+++.||||+++....  .......+.+|+++|+++ +|+||+++++++..                .+.+||||||++
T Consensus        79 ~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~----------------~~~~~lv~e~~~  142 (355)
T 1vzo_A           79 HDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT----------------ETKLHLILDYIN  142 (355)
T ss_dssp             TTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE----------------TTEEEEEECCCC
T ss_pred             CCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee----------------CceEEEEeecCC
Confidence            36899999999975431  222345567899999999 69999999999986                568999999998


Q ss_pred             C-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccccc
Q 012062           82 H-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV  160 (472)
Q Consensus        82 g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~  160 (472)
                      + +|.+++... ..+++.+++.++.||+.||+|||+++|+||||||+||||+.++++||+|||+++.+...........+
T Consensus       143 ~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~  221 (355)
T 1vzo_A          143 GGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC  221 (355)
T ss_dssp             SCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGG
T ss_pred             CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcc
Confidence            6 666666543 36999999999999999999999999999999999999999999999999999876544444445567


Q ss_pred             ccCCCCChhhhcCC-CCCCCCcchhhHHHHHHHHHhCCCCCCCCCh----HHHHHHHHHhcCCCCCCCCccCCCCCcccc
Q 012062          161 ITLWYRPPELLLGA-TKYGPAVDMWSVGCIFAELLNGKPILPGKNE----AEQLSKIFELCGSPDETIWPGVSKMPAYNH  235 (472)
Q Consensus       161 gt~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~G~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  235 (472)
                      +|+.|+|||++.+. ..++.++||||||||||+|++|+.||...+.    ......+......                 
T Consensus       222 gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-----------------  284 (355)
T 1vzo_A          222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP-----------------  284 (355)
T ss_dssp             SCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCC-----------------
T ss_pred             cCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCC-----------------
Confidence            89999999999753 3478899999999999999999999975433    2222222221100                 


Q ss_pred             CCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCC-----CHHHHhcCCCCCC
Q 012062          236 FKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRI-----SAKDALDSEYFWT  286 (472)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~-----t~~elL~h~~f~~  286 (472)
                                   ....++..+++||.+||..||++|+     |++|+++|+||..
T Consensus       285 -------------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~  327 (355)
T 1vzo_A          285 -------------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  327 (355)
T ss_dssp             -------------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             -------------CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence                         0124677899999999999999999     9999999999953


No 134
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=3.4e-41  Score=335.53  Aligned_cols=233  Identities=21%  Similarity=0.267  Sum_probs=189.2

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||+++.....    ..+.+|+.++++| +|+||+++++++..                ...+||||||
T Consensus        27 ~~~~~~~~~~vavK~~~~~~~~----~~~~~E~~~l~~l~~h~~i~~~~~~~~~----------------~~~~~lv~e~   86 (330)
T 2izr_A           27 LGKNLYTNEYVAIKLEPMKSRA----PQLHLEYRFYKQLGSGDGIPQVYYFGPC----------------GKYNAMVLEL   86 (330)
T ss_dssp             EEEETTTTEEEEEEEEETTCSS----CCHHHHHHHHHHHCSCTTSCCEEEEEEE----------------TTEEEEEEEC
T ss_pred             EEEECCCCcEEEEEEeccccch----HHHHHHHHHHHHhhCCCCCCEEEEEEec----------------CCccEEEEEe
Confidence            3678899999999999765432    3578999999999 99999999999987                5678999999


Q ss_pred             CCCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCC-----eEEeeccceeeeccCCCC
Q 012062           80 MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN-----LKLADFGLARSFSYDHNN  154 (472)
Q Consensus        80 ~~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~-----vkL~DFG~a~~~~~~~~~  154 (472)
                      +.++|.+++......+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.     +||+|||+++.+......
T Consensus        87 ~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~  166 (330)
T 2izr_A           87 LGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETK  166 (330)
T ss_dssp             CCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTC
T ss_pred             CCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCC
Confidence            977888888765567999999999999999999999999999999999999998887     999999999876543321


Q ss_pred             ------ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChH---HHHHHHHHhcCCCCCCCCc
Q 012062          155 ------TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEA---EQLSKIFELCGSPDETIWP  225 (472)
Q Consensus       155 ------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~  225 (472)
                            .....++|+.|+|||++.+ ..++.++||||||||+|+|++|+.||.+.+..   +.+..+.....        
T Consensus       167 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~--------  237 (330)
T 2izr_A          167 KHIPYREHKSLTGTARYMSINTHLG-KEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKR--------  237 (330)
T ss_dssp             CBCCCCCCCCCCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHH--------
T ss_pred             ccccccccCCcCCCccccChHHHcC-CCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhc--------
Confidence                  1245678999999999987 66899999999999999999999999885433   33333322110        


Q ss_pred             cCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          226 GVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                       ..........++ ++.+||.+||..||.+||++.+|++
T Consensus       238 -----------------~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          238 -----------------ATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             -----------------HSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             -----------------cCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence                             001112223355 8999999999999999999988864


No 135
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=7.7e-43  Score=344.53  Aligned_cols=245  Identities=22%  Similarity=0.367  Sum_probs=192.5

Q ss_pred             CceeccCCCEEEEEEeecCCcC-CCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEK-EGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||+++..... ......+.+|++++++++||||+++++++.....            ....+||||||
T Consensus        30 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~------------~~~~~~lv~e~   97 (311)
T 3ork_A           30 LARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP------------AGPLPYIVMEY   97 (311)
T ss_dssp             EEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEET------------TEEEEEEEEEC
T ss_pred             EEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCC------------CCcccEEEEec
Confidence            4788899999999999875432 2344567899999999999999999999876321            12356999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC--Ccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN--NTL  156 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~--~~~  156 (472)
                      +++ +|.+++... ..+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.+.....  ...
T Consensus        98 ~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~  176 (311)
T 3ork_A           98 VDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT  176 (311)
T ss_dssp             CCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-------------
T ss_pred             CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccc
Confidence            985 666666543 4699999999999999999999999999999999999999999999999999976643322  222


Q ss_pred             ccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccC
Q 012062          157 TNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF  236 (472)
Q Consensus       157 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  236 (472)
                      ...++|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+......+                 
T Consensus       177 ~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-----------------  238 (311)
T 3ork_A          177 AAVIGTAQYLSPEQARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP-----------------  238 (311)
T ss_dssp             -----CCTTCCHHHHHT-CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC-----------------
T ss_pred             cccCcCcccCCHHHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC-----------------
Confidence            34568999999999987 578999999999999999999999999998887776665432111                 


Q ss_pred             CCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCC
Q 012062          237 KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFW  285 (472)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~  285 (472)
                               .......++.++.+||.+||..||++|+++.++|.|+|+.
T Consensus       239 ---------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          239 ---------PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  278 (311)
T ss_dssp             ---------HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             ---------cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence                     1223345788999999999999999999999999999873


No 136
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=8.3e-42  Score=339.33  Aligned_cols=261  Identities=25%  Similarity=0.424  Sum_probs=201.4

Q ss_pred             cee-ccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCC------ccceeEEeeCCCCCCCCCCCCCCCCcCCeEE
Q 012062            2 ARE-IKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHEN------VIKLKEIVTSPGPERDEQGRPDGNKYRGSTY   74 (472)
Q Consensus         2 a~~-~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpn------Iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (472)
                      |++ ..+++.||||+++...   .....+.+|+++++.++|++      |+++++++..                .+.+|
T Consensus        33 ~~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~----------------~~~~~   93 (339)
T 1z57_A           33 CIDHKAGGRHVAVKIVKNVD---RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH----------------HGHIC   93 (339)
T ss_dssp             EEETTTTTEEEEEEEECSSH---HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE----------------TTEEE
T ss_pred             EEecCCCCcEEEEEEEecCC---chhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc----------------CCcEE
Confidence            556 5688999999997432   23456788999999997654      9999999986                56899


Q ss_pred             EEEecCCCChhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcC-------------------C
Q 012062           75 MVFEYMDHDLTGLADRPG-LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN-------------------E  134 (472)
Q Consensus        75 iVmEy~~g~l~~~~~~~~-~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~-------------------~  134 (472)
                      |||||++++|.+++.... ..+++.+++.++.||+.||+|||+++|+||||||+||||+.                   +
T Consensus        94 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~  173 (339)
T 1z57_A           94 IVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLIN  173 (339)
T ss_dssp             EEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESC
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccC
Confidence            999999889888776543 36899999999999999999999999999999999999987                   5


Q ss_pred             CCeEEeeccceeeeccCCCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 012062          135 GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFE  214 (472)
Q Consensus       135 ~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~  214 (472)
                      +.+||+|||+++....    .....++|+.|+|||++.+ ..++.++|||||||++|+|++|..||...+..+.+..+..
T Consensus       174 ~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  248 (339)
T 1z57_A          174 PDIKVVDFGSATYDDE----HHSTLVSTRHYRAPEVILA-LGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER  248 (339)
T ss_dssp             CCEEECCCSSCEETTS----CCCSSCSCGGGCCHHHHTT-SCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHH
T ss_pred             CCceEeeCcccccCcc----ccccccCCccccChHHhhC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence            6799999999976432    2234578999999999986 5789999999999999999999999999999888888877


Q ss_pred             hcCCCCCCCCccCCCCCcc----ccCCCchhhhhhHHHH----------hhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          215 LCGSPDETIWPGVSKMPAY----NHFKPSRTMKRRVREV----------FRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~----------~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                      ..+..+...+........+    ..+.............          ....++++.+||++||..||++|||+.|||+
T Consensus       249 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             HHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence            7765544332222111000    0011110001101110          1234678999999999999999999999999


Q ss_pred             CCCCCC
Q 012062          281 SEYFWT  286 (472)
Q Consensus       281 h~~f~~  286 (472)
                      |+||+.
T Consensus       329 hp~f~~  334 (339)
T 1z57_A          329 HPFFDL  334 (339)
T ss_dssp             SGGGGG
T ss_pred             CHHHHH
Confidence            999953


No 137
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=1.5e-41  Score=331.08  Aligned_cols=238  Identities=32%  Similarity=0.524  Sum_probs=197.7

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++...........+.+|++++++++|+||+++++++..                .+.+||||||+
T Consensus        40 ~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~  103 (287)
T 2wei_A           40 KCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED----------------SSSFYIVGELY  103 (287)
T ss_dssp             EEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC----------------SSEEEEEECCC
T ss_pred             EEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC----------------CCeEEEEEEcc
Confidence            36788899999999998765555556788899999999999999999999986                56789999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCC---CeEEeeccceeeeccCCCCcc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG---NLKLADFGLARSFSYDHNNTL  156 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~---~vkL~DFG~a~~~~~~~~~~~  156 (472)
                      .+ +|.+.+... ..+++.+++.++.||+.||+|||+++|+||||||+||||+.++   .+||+|||++..+...  ...
T Consensus       104 ~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~--~~~  180 (287)
T 2wei_A          104 TGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKM  180 (287)
T ss_dssp             CSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC--SSC
T ss_pred             CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCC--Ccc
Confidence            85 666665443 3689999999999999999999999999999999999997644   6999999998765432  223


Q ss_pred             ccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccC
Q 012062          157 TNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF  236 (472)
Q Consensus       157 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  236 (472)
                      ....+|..|+|||++.+  .++.++|||||||++|+|++|..||.+.+..+.+..+..........              
T Consensus       181 ~~~~~~~~y~aPE~~~~--~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------  244 (287)
T 2wei_A          181 KDRIGTAYYIAPEVLRG--TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLP--------------  244 (287)
T ss_dssp             SCHHHHHTTCCHHHHTT--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSG--------------
T ss_pred             ccccCcccccChHHhcC--CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCch--------------
Confidence            34467999999999875  48899999999999999999999999998888777775532221110              


Q ss_pred             CCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCC
Q 012062          237 KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFW  285 (472)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~  285 (472)
                                  .+..++.++.+||++||..||++|||+.|+|+|+||.
T Consensus       245 ------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~  281 (287)
T 2wei_A          245 ------------QWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ  281 (287)
T ss_dssp             ------------GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHH
T ss_pred             ------------hhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHh
Confidence                        1234678899999999999999999999999999994


No 138
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=4.9e-42  Score=336.11  Aligned_cols=248  Identities=21%  Similarity=0.349  Sum_probs=178.2

Q ss_pred             ceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCC
Q 012062            2 AREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD   81 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~   81 (472)
                      |++..+++.||||+++..... .....+.+|+.++++++|+||+++++++..                .+.+||||||++
T Consensus        34 ~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~~   96 (303)
T 2vwi_A           34 AYCAPKKEKVAIKRINLEKCQ-TSMDELLKEIQAMSQCHHPNIVSYYTSFVV----------------KDELWLVMKLLS   96 (303)
T ss_dssp             EEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEES----------------SSCEEEEEECCT
T ss_pred             EEECCCCcEEEEEEEEhhhcc-hhHHHHHHHHHHHhhcCCCCEeeEEEEEee----------------cCCcEEEehhcc
Confidence            667789999999999765432 234567899999999999999999999987                557899999997


Q ss_pred             C-ChhhhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCC-
Q 012062           82 H-DLTGLADR-------PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDH-  152 (472)
Q Consensus        82 g-~l~~~~~~-------~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~-  152 (472)
                      + +|.+++..       ....+++..++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||++....... 
T Consensus        97 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~  176 (303)
T 2vwi_A           97 GGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD  176 (303)
T ss_dssp             TCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC----
T ss_pred             CCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCC
Confidence            5 66666542       34468999999999999999999999999999999999999999999999999987654321 


Q ss_pred             ---CCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCC
Q 012062          153 ---NNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK  229 (472)
Q Consensus       153 ---~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  229 (472)
                         ........+|+.|+|||++.+...++.++|||||||++|+|++|+.||...+..+.+..............      
T Consensus       177 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------  250 (303)
T 2vwi_A          177 ITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG------  250 (303)
T ss_dssp             -----------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-------
T ss_pred             ccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccc------
Confidence               11223456899999999987545688999999999999999999999998877766655443211110000      


Q ss_pred             CCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          230 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                    .........++.++.+||.+||..||++|||+.|+++|+||..
T Consensus       251 --------------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  293 (303)
T 2vwi_A          251 --------------VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK  293 (303)
T ss_dssp             ------------------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC--
T ss_pred             --------------cccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhc
Confidence                          0001122356788999999999999999999999999999953


No 139
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=5.2e-42  Score=342.50  Aligned_cols=239  Identities=20%  Similarity=0.305  Sum_probs=190.7

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHH-HHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKI-LKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~i-l~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||+++...... ....+..|+.+ ++.++|+||+++++++..                .+.+||||||
T Consensus        69 ~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~----------------~~~~~lv~e~  131 (340)
T 3an0_A           69 KMRHVPSGQIMAVKRIRATVNSQ-EQKRLLMDLDISMRTVDCPFTVTFYGALFR----------------EGDVWICMEL  131 (340)
T ss_dssp             EEEETTTTEEEEEEEECSCCCCH-HHHHHHHHHHHHHTTCCCTTTCCEEEEEEC----------------SSCEEEEECC
T ss_pred             EEEEcCCCCEEEEEEeccccCcH-HHHHHHHHHHHHHhhcCCCcEEEEeeEEEe----------------CCcEEEEHHH
Confidence            36788899999999998654332 33455566666 778899999999999986                5578999999


Q ss_pred             CCCChhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCc
Q 012062           80 MDHDLTGLADR---PGLRFTVPQIKCYMKQLLTGLHYCHVN-QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNT  155 (472)
Q Consensus        80 ~~g~l~~~~~~---~~~~l~~~~i~~i~~Qll~aL~~LH~~-giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~  155 (472)
                      ++++|.+++..   ....+++..++.|+.||+.||+|||++ +|+||||||+||||+.++.+||+|||+++.+...  ..
T Consensus       132 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--~~  209 (340)
T 3an0_A          132 MDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS--VA  209 (340)
T ss_dssp             CSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH--HH
T ss_pred             hhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCceecccc--cc
Confidence            99987766543   455799999999999999999999987 9999999999999999999999999998765321  12


Q ss_pred             cccccccCCCCChhhhcC---CCCCCCCcchhhHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHhcCCCCCCCCccCCCCC
Q 012062          156 LTNRVITLWYRPPELLLG---ATKYGPAVDMWSVGCIFAELLNGKPILPGK-NEAEQLSKIFELCGSPDETIWPGVSKMP  231 (472)
Q Consensus       156 ~~~~~gt~~y~aPE~l~~---~~~~~~~~DiwSlG~il~ell~G~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~  231 (472)
                      .....+|+.|+|||++.+   ...++.++||||||||+|+|++|+.||... +....+..+........           
T Consensus       210 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-----------  278 (340)
T 3an0_A          210 KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL-----------  278 (340)
T ss_dssp             HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCC-----------
T ss_pred             cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCC-----------
Confidence            223468999999999743   245788999999999999999999999874 44445554443211100           


Q ss_pred             ccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          232 AYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                       ....++.++.+||.+||..||++|||+.|||+|+||+.
T Consensus       279 -----------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~  316 (340)
T 3an0_A          279 -----------------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL  316 (340)
T ss_dssp             -----------------CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             -----------------CcccCCHHHHHHHHHHccCCcccCcCHHHHhcCcCccc
Confidence                             01236778999999999999999999999999999954


No 140
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=2.7e-41  Score=334.93  Aligned_cols=239  Identities=31%  Similarity=0.478  Sum_probs=187.2

Q ss_pred             CceeccCCCEEEEEEeecCCc------CCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEE
Q 012062            1 MAREIKTGEIVALKKIRMDNE------KEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTY   74 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~------~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (472)
                      +|++..+++.||||+++....      .......+.+|+++|++|+|+||+++++++..                 ..+|
T Consensus        28 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----------------~~~~   90 (322)
T 2ycf_A           28 LAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-----------------EDYY   90 (322)
T ss_dssp             EEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES-----------------SSEE
T ss_pred             EEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC-----------------CceE
Confidence            367889999999999975431      11233457899999999999999999999874                 2379


Q ss_pred             EEEecCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCC---eEEeeccceeeecc
Q 012062           75 MVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADFGLARSFSY  150 (472)
Q Consensus        75 iVmEy~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~---vkL~DFG~a~~~~~  150 (472)
                      |||||+.+ +|.+.+.. ...+++.+++.++.||+.||+|||+++|+||||||+||||+.++.   +||+|||++.....
T Consensus        91 lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  169 (322)
T 2ycf_A           91 IVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE  169 (322)
T ss_dssp             EEEECCTTEETHHHHST-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCC
T ss_pred             EEEecCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceeccc
Confidence            99999986 66666654 347999999999999999999999999999999999999987665   99999999987542


Q ss_pred             CCCCccccccccCCCCChhhhc--CCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHH-HHHHHhcCCCCCCCCccC
Q 012062          151 DHNNTLTNRVITLWYRPPELLL--GATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL-SKIFELCGSPDETIWPGV  227 (472)
Q Consensus       151 ~~~~~~~~~~gt~~y~aPE~l~--~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~  227 (472)
                      .  .......+|..|+|||++.  +...++.++|||||||++|+|++|..||........+ ..+......         
T Consensus       170 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---------  238 (322)
T 2ycf_A          170 T--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN---------  238 (322)
T ss_dssp             C--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCC---------
T ss_pred             c--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccc---------
Confidence            2  1223356799999999974  2356889999999999999999999999876543222 222221100         


Q ss_pred             CCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCC
Q 012062          228 SKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFW  285 (472)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~  285 (472)
                                       .....+..++..+++||.+||..||++|||+.|+|+|+||.
T Consensus       239 -----------------~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~  279 (322)
T 2ycf_A          239 -----------------FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ  279 (322)
T ss_dssp             -----------------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGC
T ss_pred             -----------------cCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcC
Confidence                             01233456788999999999999999999999999999994


No 141
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=2.8e-43  Score=357.34  Aligned_cols=244  Identities=16%  Similarity=0.217  Sum_probs=179.3

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHH---HHHhcCCCCcccee-------EEeeCCCCCCCCCCCCC-CCC
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIK---ILKKLQHENVIKLK-------EIVTSPGPERDEQGRPD-GNK   68 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~---il~~l~hpnIv~l~-------~~~~~~~~~~~~~~~~~-~~~   68 (472)
                      +|+++.+++.||||+++... ........+.+|++   +|+.++|||||+++       ++++..+.........+ ...
T Consensus        91 ~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (377)
T 3byv_A           91 EATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDM  170 (377)
T ss_dssp             EEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------C
T ss_pred             EEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCce
Confidence            36778899999999998653 23345567889995   55555799999998       67665321000000000 000


Q ss_pred             cCCeEEEEEecCCCChhhhhcCCCCCCC-------HHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEee
Q 012062           69 YRGSTYMVFEYMDHDLTGLADRPGLRFT-------VPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLAD  141 (472)
Q Consensus        69 ~~~~~~iVmEy~~g~l~~~~~~~~~~l~-------~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~D  141 (472)
                      +--..||||||++|+|.+++.+.. .++       +..++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|
T Consensus       171 ~i~~~~lv~E~~~g~L~~~l~~~~-~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~D  249 (377)
T 3byv_A          171 WVLSRFFLYPRMQSNLQTFGEVLL-SHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTG  249 (377)
T ss_dssp             EEESEEEEEECCSEEHHHHHHHHH-HTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECC
T ss_pred             EEEEEEEEEeccCCCHHHHHHhcc-ccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEe
Confidence            001378999999988888776432 233       478888999999999999999999999999999999999999999


Q ss_pred             ccceeeeccCCCCccccccccCCCCChhhhcCC----------CCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHH
Q 012062          142 FGLARSFSYDHNNTLTNRVITLWYRPPELLLGA----------TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSK  211 (472)
Q Consensus       142 FG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----------~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~  211 (472)
                      ||+++....    .....++ +.|+|||++.+.          ..++.++||||||||||+|++|+.||.+.+..+.+..
T Consensus       250 FG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~  324 (377)
T 3byv_A          250 FEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEW  324 (377)
T ss_dssp             GGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGG
T ss_pred             chhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhh
Confidence            999985332    3344567 999999999863          2689999999999999999999999976553222111


Q ss_pred             HHHhcCCCCCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCC
Q 012062          212 IFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF  284 (472)
Q Consensus       212 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f  284 (472)
                      +.                                  ..+..++.++++||.+||..||++|||+.|+|+|+||
T Consensus       325 ~~----------------------------------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f  363 (377)
T 3byv_A          325 IF----------------------------------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEY  363 (377)
T ss_dssp             GG----------------------------------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHH
T ss_pred             hh----------------------------------hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHH
Confidence            11                                  0113567889999999999999999999999999999


No 142
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=1.3e-41  Score=340.39  Aligned_cols=261  Identities=26%  Similarity=0.415  Sum_probs=201.1

Q ss_pred             ceeccCC-CEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCC------ccceeEEeeCCCCCCCCCCCCCCCCcCCeEE
Q 012062            2 AREIKTG-EIVALKKIRMDNEKEGFPITAIREIKILKKLQHEN------VIKLKEIVTSPGPERDEQGRPDGNKYRGSTY   74 (472)
Q Consensus         2 a~~~~tg-~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpn------Iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (472)
                      |++..++ +.||||+++...   .....+.+|+.++++++|++      |+.+++++..                .+.+|
T Consensus        38 ~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~----------------~~~~~   98 (355)
T 2eu9_A           38 CLDHARGKSQVALKIIRNVG---KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF----------------HGHMC   98 (355)
T ss_dssp             EEETTTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE----------------TTEEE
T ss_pred             EEecCCCceEEEEEEEcccc---cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee----------------CCeEE
Confidence            6677777 689999997432   23456778999999997765      8999999876                56899


Q ss_pred             EEEecCCCChhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEE-------------------cCC
Q 012062           75 MVFEYMDHDLTGLADRPG-LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI-------------------DNE  134 (472)
Q Consensus        75 iVmEy~~g~l~~~~~~~~-~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl-------------------~~~  134 (472)
                      |||||++++++..+.... ..+++.+++.|+.||+.||+|||+++|+||||||+||||                   +.+
T Consensus        99 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~  178 (355)
T 2eu9_A           99 IAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKN  178 (355)
T ss_dssp             EEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESC
T ss_pred             EEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCC
Confidence            999999998888776543 469999999999999999999999999999999999999                   567


Q ss_pred             CCeEEeeccceeeeccCCCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 012062          135 GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFE  214 (472)
Q Consensus       135 ~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~  214 (472)
                      +.+||+|||+++....    .....++|+.|+|||++.+ ..++.++||||||||+|+|++|+.||...+..+.+..+.+
T Consensus       179 ~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  253 (355)
T 2eu9_A          179 TSIRVADFGSATFDHE----HHTTIVATRHYRPPEVILE-LGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK  253 (355)
T ss_dssp             CCEEECCCTTCEETTS----CCCSSCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CcEEEeecCccccccc----cccCCcCCCcccCCeeeec-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            8899999999976432    2334578999999999986 5789999999999999999999999999999888888888


Q ss_pred             hcCCCCCCCCccCCCCCcc----ccCCCchhhhhhHHHH----------hhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          215 LCGSPDETIWPGVSKMPAY----NHFKPSRTMKRRVREV----------FRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~----------~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                      ..+..+...+........+    ..+.......+.....          ....+.++.+||++||..||++|||+.|+|+
T Consensus       254 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          254 ILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL  333 (355)
T ss_dssp             HHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            7766554332222111000    0000000000001100          0123568999999999999999999999999


Q ss_pred             CCCCCC
Q 012062          281 SEYFWT  286 (472)
Q Consensus       281 h~~f~~  286 (472)
                      |+||..
T Consensus       334 hp~f~~  339 (355)
T 2eu9_A          334 HPFFAG  339 (355)
T ss_dssp             SGGGGG
T ss_pred             ChhhcC
Confidence            999953


No 143
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=7.8e-41  Score=328.45  Aligned_cols=235  Identities=25%  Similarity=0.390  Sum_probs=197.4

Q ss_pred             ceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCC
Q 012062            2 AREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD   81 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~   81 (472)
                      |++..+++.||||+++..... .....+.+|+.++++++|+||+++++++..                ...+||||||++
T Consensus        41 ~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~~  103 (303)
T 3a7i_A           41 GIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLK----------------DTKLWIIMEYLG  103 (303)
T ss_dssp             EEETTTCCEEEEEEEETTTCS-TTHHHHHHHHHHHHHCCCTTBCCEEEEEEE----------------TTEEEEEEECCT
T ss_pred             EEECCCCcEEEEEEecccccH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEec----------------CCeEEEEEEeCC
Confidence            678889999999999866433 345678899999999999999999999986                567999999998


Q ss_pred             C-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccccc
Q 012062           82 H-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV  160 (472)
Q Consensus        82 g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~  160 (472)
                      + +|.+++..  ..+++.+++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++..+.... .......
T Consensus       104 ~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~  180 (303)
T 3a7i_A          104 GGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNTFV  180 (303)
T ss_dssp             TEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-CCBCCCC
T ss_pred             CCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccc-cccCccC
Confidence            6 66666644  368999999999999999999999999999999999999999999999999998765332 2234457


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCch
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSR  240 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (472)
                      +|..|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+.+..+.......                     
T Consensus       181 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------  238 (303)
T 3a7i_A          181 GTPFWMAPEVIKQ-SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPT---------------------  238 (303)
T ss_dssp             SCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC---------------------
T ss_pred             CCcCccCHHHHhc-CCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCC---------------------
Confidence            8999999999976 568899999999999999999999999888777666554321100                     


Q ss_pred             hhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          241 TMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                              ....++..+.+||.+||..||++|||+.|+|+|+||..
T Consensus       239 --------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~  276 (303)
T 3a7i_A          239 --------LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR  276 (303)
T ss_dssp             --------CCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHH
T ss_pred             --------CccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhc
Confidence                    01236678999999999999999999999999999965


No 144
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=3e-41  Score=334.20  Aligned_cols=259  Identities=23%  Similarity=0.323  Sum_probs=193.5

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++...... ....+.+|+++|++++|+||+++++++....              ...+||||||+
T Consensus        27 ~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--------------~~~~~lv~e~~   91 (319)
T 4euu_A           27 RGRHKKTGDLFAIKVFNNISFLR-PVDVQMREFEVLKKLNHKNIVKLFAIEEETT--------------TRHKVLIMEFC   91 (319)
T ss_dssp             EEEETTTCCEEEEEEECGGGGGS-CHHHHHHHHHHHHHCCCTTBCCEEEEEECTT--------------TCCEEEEEECC
T ss_pred             EEEECCCCcEEEEEEeccccccc-hHHHHHHHHHHHHhcCCCCcceEEEEeecCC--------------CceEEEEEeCC
Confidence            47788999999999998654332 3556789999999999999999999997632              34789999999


Q ss_pred             CC-ChhhhhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEE----cCCCCeEEeeccceeeeccCCC
Q 012062           81 DH-DLTGLADRPG--LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI----DNEGNLKLADFGLARSFSYDHN  153 (472)
Q Consensus        81 ~g-~l~~~~~~~~--~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl----~~~~~vkL~DFG~a~~~~~~~~  153 (472)
                      ++ +|.+++....  ..+++.+++.|+.||+.||+|||+++|+||||||+||||    +.++.+||+|||+++.+.... 
T Consensus        92 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~-  170 (319)
T 4euu_A           92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE-  170 (319)
T ss_dssp             TTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC-
T ss_pred             CCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC-
Confidence            85 6777766532  238999999999999999999999999999999999999    777789999999998765432 


Q ss_pred             CccccccccCCCCChhhhcC-------CCCCCCCcchhhHHHHHHHHHhCCCCCCCCC----hHHHHHHHHHhcCCCCCC
Q 012062          154 NTLTNRVITLWYRPPELLLG-------ATKYGPAVDMWSVGCIFAELLNGKPILPGKN----EAEQLSKIFELCGSPDET  222 (472)
Q Consensus       154 ~~~~~~~gt~~y~aPE~l~~-------~~~~~~~~DiwSlG~il~ell~G~~pf~~~~----~~~~~~~i~~~~~~~~~~  222 (472)
                       .....++|..|+|||++..       ...++.++||||||||+|+|++|+.||...+    ..+.+.++....   +..
T Consensus       171 -~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~---p~~  246 (319)
T 4euu_A          171 -QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK---PSG  246 (319)
T ss_dssp             -CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC---CTT
T ss_pred             -ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC---Ccc
Confidence             3344578999999999862       2568899999999999999999999997543    234444444332   222


Q ss_pred             CCccCCCCCc-cccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCC
Q 012062          223 IWPGVSKMPA-YNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSE  282 (472)
Q Consensus       223 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~  282 (472)
                      .|........ ...+......   ...+...++..+.+||++||..||++|+|++|+|+|+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          247 AISGVQKAENGPIDWSGDMPV---SCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             CCEEEECSTTCCEEEESSCCT---TCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             cchhhhcccCCccccCccCCc---ccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence            2222221110 0000000000   0012245677899999999999999999999999875


No 145
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=8.5e-42  Score=343.81  Aligned_cols=263  Identities=22%  Similarity=0.326  Sum_probs=192.2

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||+|+++.... ......+.+|+.+|++++|+||+++++++..                .+.+||||||+
T Consensus        51 ~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----------------~~~~~lv~e~~  113 (360)
T 3eqc_A           51 KVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYS----------------DGEISICMEHM  113 (360)
T ss_dssp             EEEETTTCCEEEEEEEECCCC-HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE----------------TTEEEEEECCC
T ss_pred             EEEECCCCcEEEEEEeccccC-HHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE----------------CCEEEEEEECC
Confidence            367889999999999986532 2345678899999999999999999999987                56899999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN-QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~-giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      ++ +|.+++.+. ..+++..++.|+.||+.||+|||++ +|+||||||+||||+.++.+||+|||++......   ....
T Consensus       114 ~~~~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~  189 (360)
T 3eqc_A          114 DGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS  189 (360)
T ss_dssp             TTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---C---
T ss_pred             CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc---cccC
Confidence            86 666666543 3689999999999999999999996 9999999999999999999999999998655322   2234


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCC-CCCCCCccCCCCCccccCC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGS-PDETIWPGVSKMPAYNHFK  237 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~  237 (472)
                      .++|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+....+...... .....+...........+.
T Consensus       190 ~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (360)
T 3eqc_A          190 FVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFG  268 (360)
T ss_dssp             -CCCCTTCCHHHHTT-CCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------------
T ss_pred             CCCCCCeECHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccc
Confidence            578999999999986 57899999999999999999999999987766544333111111 1100000000000000000


Q ss_pred             ----CchhhhhhHHHH---------hhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCC
Q 012062          238 ----PSRTMKRRVREV---------FRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFW  285 (472)
Q Consensus       238 ----~~~~~~~~~~~~---------~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~  285 (472)
                          ............         ...++.++++||++||..||++|||++|+|+|+||.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~  329 (360)
T 3eqc_A          269 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK  329 (360)
T ss_dssp             -----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHH
T ss_pred             cCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhh
Confidence                000000000100         123688999999999999999999999999999994


No 146
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=2.7e-41  Score=327.43  Aligned_cols=240  Identities=27%  Similarity=0.431  Sum_probs=196.0

Q ss_pred             ceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCC
Q 012062            2 AREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD   81 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~   81 (472)
                      |++..+++.||||+++...........+.+|++++++++|+||+++++++....              ...+||||||++
T Consensus        25 ~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------------~~~~~lv~e~~~   90 (279)
T 2w5a_A           25 IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT--------------NTTLYIVMEYCE   90 (279)
T ss_dssp             EEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGG--------------GTEEEEEEECCT
T ss_pred             EEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCC--------------CceEEEEEeCCC
Confidence            678889999999999876544445567889999999999999999999885421              457899999998


Q ss_pred             C-ChhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCCCCCcEEEcCCCCeEEeeccceeeeccCC
Q 012062           82 H-DLTGLADR---PGLRFTVPQIKCYMKQLLTGLHYCHVNQ-----VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDH  152 (472)
Q Consensus        82 g-~l~~~~~~---~~~~l~~~~i~~i~~Qll~aL~~LH~~g-----iiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~  152 (472)
                      + +|.+++..   ....+++..++.++.||+.||+|||+++     |+||||||+||||+.++.+||+|||+++......
T Consensus        91 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~  170 (279)
T 2w5a_A           91 GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT  170 (279)
T ss_dssp             TEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---C
T ss_pred             CCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecccc
Confidence            6 77776653   2335899999999999999999999999     9999999999999999999999999987654321


Q ss_pred             CCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCc
Q 012062          153 NNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPA  232 (472)
Q Consensus       153 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  232 (472)
                       .......+|..|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+....+.......             
T Consensus       171 -~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~-------------  235 (279)
T 2w5a_A          171 -SFAKTFVGTPYYMSPEQMNR-MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR-------------  235 (279)
T ss_dssp             -HHHHHHHSCCTTCCHHHHHC-C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC-------------
T ss_pred             -ccccccCCCccccChHHhcc-CCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhccccc-------------
Confidence             11223467999999999986 568899999999999999999999999988877777665432110             


Q ss_pred             cccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          233 YNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                      +...++.++.+||.+||..||++|||+.|||+|+|+..
T Consensus       236 ----------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~  273 (279)
T 2w5a_A          236 ----------------IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE  273 (279)
T ss_dssp             ----------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred             ----------------CCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence                            01136778999999999999999999999999999954


No 147
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=7.1e-41  Score=330.67  Aligned_cols=229  Identities=24%  Similarity=0.323  Sum_probs=181.3

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Ch
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DL   84 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l   84 (472)
                      .+++.||||++............+.+|+++|++++|+||+++++++..                .+.+||||||+++ +|
T Consensus        58 ~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----------------~~~~~lv~e~~~~~~L  121 (309)
T 3p86_A           58 WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ----------------PPNLSIVTEYLSRGSL  121 (309)
T ss_dssp             ETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----------------TTCCEEEEECCTTCBH
T ss_pred             ECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE----------------CCceEEEEecCCCCcH
Confidence            478899999998665444445678899999999999999999999976                4568999999986 67


Q ss_pred             hhhhcCCCC--CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccccc
Q 012062           85 TGLADRPGL--RFTVPQIKCYMKQLLTGLHYCHVNQ--VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV  160 (472)
Q Consensus        85 ~~~~~~~~~--~l~~~~i~~i~~Qll~aL~~LH~~g--iiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~  160 (472)
                      .+++.+...  .+++..++.++.||+.||+|||+++  |+||||||+||||+.++.+||+|||+++..... ........
T Consensus       122 ~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~-~~~~~~~~  200 (309)
T 3p86_A          122 YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST-FLSSKSAA  200 (309)
T ss_dssp             HHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----------------
T ss_pred             HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc-ccccccCC
Confidence            777765432  3899999999999999999999999  999999999999999999999999999754332 22234457


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCch
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSR  240 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (472)
                      +|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+....+........                    
T Consensus       201 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~--------------------  259 (309)
T 3p86_A          201 GTPEWMAPEVLRD-EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE--------------------  259 (309)
T ss_dssp             -CCTTSCHHHHTT-CCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCC--------------------
T ss_pred             CCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC--------------------
Confidence            8999999999986 5689999999999999999999999999888777766643221111                    


Q ss_pred             hhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          241 TMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                              ....++..+.+||++||..||++|||+.|+++
T Consensus       260 --------~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  291 (309)
T 3p86_A          260 --------IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD  291 (309)
T ss_dssp             --------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------CCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                    01246778999999999999999999999986


No 148
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=4.4e-41  Score=324.56  Aligned_cols=230  Identities=22%  Similarity=0.345  Sum_probs=190.8

Q ss_pred             ceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCC
Q 012062            2 AREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD   81 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~   81 (472)
                      |++. +++.||||+++.....   ...+.+|++++++++|+||+++++++.+                .+.+||||||++
T Consensus        29 ~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~~   88 (269)
T 4hcu_A           29 GYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLE----------------QAPICLVFEFME   88 (269)
T ss_dssp             EEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECS----------------SSSEEEEEECCT
T ss_pred             EEec-CCCeEEEEEecccccC---HHHHHHHHHHHHhCCCCCEeeEEEEEec----------------CCceEEEEEeCC
Confidence            3444 5778999999865432   3568899999999999999999999976                557899999998


Q ss_pred             C-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccccc
Q 012062           82 H-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV  160 (472)
Q Consensus        82 g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~  160 (472)
                      + +|.+++......+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++...............
T Consensus        89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  168 (269)
T 4hcu_A           89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK  168 (269)
T ss_dssp             TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTT
T ss_pred             CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccccCcc
Confidence            6 677777666667999999999999999999999999999999999999999999999999999765433323333445


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCc
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS  239 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (472)
                      +|..|+|||++.+ ..++.++|||||||++|+|++ |+.||...+..+....+........                   
T Consensus       169 ~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------  228 (269)
T 4hcu_A          169 FPVKWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK-------------------  228 (269)
T ss_dssp             CCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC-------------------
T ss_pred             cccccCCHHHhcC-CCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCC-------------------
Confidence            6788999999976 568999999999999999999 9999999988888777754321111                   


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                ...++..+.+||.+||..||++|||+.|++++
T Consensus       229 ----------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          229 ----------PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             ----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------CCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence                      01356789999999999999999999999874


No 149
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=8.2e-41  Score=334.54  Aligned_cols=253  Identities=23%  Similarity=0.376  Sum_probs=194.5

Q ss_pred             ceeccCCCEEEEEEeecCCcCCCch---------------hhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCC
Q 012062            2 AREIKTGEIVALKKIRMDNEKEGFP---------------ITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG   66 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~~~~~~---------------~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~   66 (472)
                      |++  +++.||||+++.........               ..+.+|+.++++|+|+||+++++++..             
T Consensus        50 ~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------------  114 (348)
T 2pml_X           50 CEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN-------------  114 (348)
T ss_dssp             EEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEES-------------
T ss_pred             EEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEee-------------
Confidence            455  89999999998653322111               678899999999999999999999987             


Q ss_pred             CCcCCeEEEEEecCCC-Chhhh------hcCC-CCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEEcCCCCe
Q 012062           67 NKYRGSTYMVFEYMDH-DLTGL------ADRP-GLRFTVPQIKCYMKQLLTGLHYCHV-NQVLHRDIKGSNLLIDNEGNL  137 (472)
Q Consensus        67 ~~~~~~~~iVmEy~~g-~l~~~------~~~~-~~~l~~~~i~~i~~Qll~aL~~LH~-~giiHrDLKp~NILl~~~~~v  137 (472)
                         .+.+||||||+++ +|.++      +... ...+++..++.++.||+.||+|||+ +||+||||||+||||+.++.+
T Consensus       115 ---~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~  191 (348)
T 2pml_X          115 ---YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRV  191 (348)
T ss_dssp             ---SSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCE
T ss_pred             ---CCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCcE
Confidence               5689999999997 67666      4332 4579999999999999999999999 999999999999999999999


Q ss_pred             EEeeccceeeeccCCCCccccccccCCCCChhhhcCCCCCCC-CcchhhHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHh
Q 012062          138 KLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGP-AVDMWSVGCIFAELLNGKPILPGKNE-AEQLSKIFEL  215 (472)
Q Consensus       138 kL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~-~~DiwSlG~il~ell~G~~pf~~~~~-~~~~~~i~~~  215 (472)
                      ||+|||++......   ......+|..|+|||++.+...++. ++|||||||++|+|++|+.||...+. .+.+..+...
T Consensus       192 kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~  268 (348)
T 2pml_X          192 KLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTK  268 (348)
T ss_dssp             EECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSC
T ss_pred             EEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhcc
Confidence            99999999876432   3344578999999999987435555 89999999999999999999998877 5555555332


Q ss_pred             cCCCCCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          216 CGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      ....+... ....          ..............++.++.+||++||..||.+|||+.|+|+|+||..
T Consensus       269 ~~~~~~~~-~~~~----------~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~  328 (348)
T 2pml_X          269 NIEYPLDR-NHFL----------YPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLAD  328 (348)
T ss_dssp             CCCCCCSS-SSST----------TTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTT
T ss_pred             CcCCccch-hhhh----------ccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccC
Confidence            11111100 0000          000011112233568889999999999999999999999999999954


No 150
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=5.3e-41  Score=333.89  Aligned_cols=232  Identities=24%  Similarity=0.344  Sum_probs=188.7

Q ss_pred             ceeccCCC---EEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEe
Q 012062            2 AREIKTGE---IVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFE   78 (472)
Q Consensus         2 a~~~~tg~---~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmE   78 (472)
                      |++..+++   .||||+++..... .....+.+|+++|++|+|+||+++++++..                .+.+|||||
T Consensus        68 ~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----------------~~~~~lv~e  130 (325)
T 3kul_A           68 GRLRVPGQRDVPVAIKALKAGYTE-RQRRDFLSEASIMGQFDHPNIIRLEGVVTR----------------GRLAMIVTE  130 (325)
T ss_dssp             EEECCTTSCCEEEEEEEECTTCCH-HHHHHHHHHHHHHTTCCCTTBCCEEEEECG----------------GGCCEEEEE
T ss_pred             EEEecCCCCCceEEEEecCCCCCH-HHHHHHHHHHHHHHhCCCCCCCcEEEEEEe----------------CCccEEEee
Confidence            45665555   4999999854322 234568899999999999999999999976                557899999


Q ss_pred             cCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCc--
Q 012062           79 YMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNT--  155 (472)
Q Consensus        79 y~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~--  155 (472)
                      |+++ +|.+++......+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.+.......  
T Consensus       131 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  210 (325)
T 3kul_A          131 YMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT  210 (325)
T ss_dssp             CCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEE
T ss_pred             CCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceee
Confidence            9986 7777776666679999999999999999999999999999999999999999999999999998765432222  


Q ss_pred             cccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccc
Q 012062          156 LTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYN  234 (472)
Q Consensus       156 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  234 (472)
                      .....+|..|+|||++.+ ..++.++||||||||+|+|++ |..||...+..+.+..+......+.              
T Consensus       211 ~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------  275 (325)
T 3kul_A          211 TTGGKIPIRWTAPEAIAF-RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA--------------  275 (325)
T ss_dssp             CC---CCGGGSCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCC--------------
T ss_pred             ccCCCCcccccCHhHhcC-CCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCC--------------
Confidence            222344778999999976 568899999999999999999 9999999998888877765322111              


Q ss_pred             cCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          235 HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                     ...++..+.+||.+||..||++|||+.||++
T Consensus       276 ---------------~~~~~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          276 ---------------PMGCPHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             ---------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------------CCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                           1146778999999999999999999999985


No 151
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=4.8e-41  Score=347.14  Aligned_cols=237  Identities=25%  Similarity=0.355  Sum_probs=181.1

Q ss_pred             ceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            2 AREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      ++...+++.||||++....     ...+.+|+++|+++ +|||||++++++.+                ...+|||||||
T Consensus        42 ~~~~~~~~~vAvK~~~~~~-----~~~~~~E~~~l~~l~~HpnIv~l~~~~~~----------------~~~~~lv~E~~  100 (432)
T 3p23_A           42 YRGMFDNRDVAVKRILPEC-----FSFADREVQLLRESDEHPNVIRYFCTEKD----------------RQFQYIAIELC  100 (432)
T ss_dssp             EEEESSSSEEEEEEECTTT-----EEECHHHHHHHHHSCCCTTBCCEEEEEEE----------------TTEEEEEEECC
T ss_pred             EEEEeCCeEEEEEEECHHH-----HHHHHHHHHHHHhccCCCCcCeEEEEEec----------------CCEEEEEEECC
Confidence            3566789999999997532     22456899999999 79999999999986                56889999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCC-----CCeEEeeccceeeeccCCC--
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE-----GNLKLADFGLARSFSYDHN--  153 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~-----~~vkL~DFG~a~~~~~~~~--  153 (472)
                      .++|.+++......+.+.+++.|+.||+.||+|||+++|+||||||+||||+.+     ..+||+|||+++.......  
T Consensus       101 ~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~  180 (432)
T 3p23_A          101 AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF  180 (432)
T ss_dssp             SEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-------
T ss_pred             CCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcce
Confidence            999999888776666766788999999999999999999999999999999532     2578999999987653321  


Q ss_pred             CccccccccCCCCChhhhcC--CCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCC
Q 012062          154 NTLTNRVITLWYRPPELLLG--ATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM  230 (472)
Q Consensus       154 ~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  230 (472)
                      ......++|+.|+|||++.+  ...++.++||||||||+|+|++ |..||......... .+..   ......       
T Consensus       181 ~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~-~~~~---~~~~~~-------  249 (432)
T 3p23_A          181 SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN-ILLG---ACSLDC-------  249 (432)
T ss_dssp             -----CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH-HHTT---CCCCTT-------
T ss_pred             eeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH-HHhc---cCCccc-------
Confidence            23344678999999999874  2456789999999999999999 89999665443322 2211   100000       


Q ss_pred             CccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          231 PAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                           ..           .....+..+++||.+||..||++|||+.|||+|+|||.
T Consensus       250 -----~~-----------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          250 -----LH-----------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             -----SC-----------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             -----cC-----------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence                 00           00134566899999999999999999999999999974


No 152
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=2e-40  Score=324.07  Aligned_cols=234  Identities=19%  Similarity=0.207  Sum_probs=191.7

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||+++....    ...+.+|+.+++.+ +|+||+++++++..                ...+||||||
T Consensus        28 ~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~----------------~~~~~lv~e~   87 (298)
T 1csn_A           28 EGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQE----------------GLHNVLVIDL   87 (298)
T ss_dssp             EEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEEE----------------TTEEEEEEEC
T ss_pred             EEEECCCCcEEEEEEeccCCc----cHHHHHHHHHHHHHhcCCCCCeEEeecCC----------------CceeEEEEEe
Confidence            367889999999999975433    23578999999999 79999999999976                5688999999


Q ss_pred             CCCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCC-----eEEeeccceeeeccCCCC
Q 012062           80 MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN-----LKLADFGLARSFSYDHNN  154 (472)
Q Consensus        80 ~~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~-----vkL~DFG~a~~~~~~~~~  154 (472)
                      +.++|.+++......+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.     +||+|||+++........
T Consensus        88 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~  167 (298)
T 1csn_A           88 LGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTK  167 (298)
T ss_dssp             CCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTC
T ss_pred             cCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccccc
Confidence            977888888766667999999999999999999999999999999999999987776     999999999876543321


Q ss_pred             ------ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHhcCCCCCCCCc
Q 012062          155 ------TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKN---EAEQLSKIFELCGSPDETIWP  225 (472)
Q Consensus       155 ------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~  225 (472)
                            ......+|..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+   ..+.+..+....         
T Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~---------  237 (298)
T 1csn_A          168 QHIPYREKKNLSGTARYMSINTHLG-REQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK---------  237 (298)
T ss_dssp             CBCCCCCCCCCCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHH---------
T ss_pred             ccccccCccCCCCCcccCCchhhcC-CCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhc---------
Confidence                  2345578999999999876 568999999999999999999999998854   333333332211         


Q ss_pred             cCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          226 GVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                      ...........++.++.+||.+||..||++|||+.+|++
T Consensus       238 ----------------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          238 ----------------QSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             ----------------HHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             ----------------cCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence                            011223344568889999999999999999999999875


No 153
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.3e-40  Score=330.01  Aligned_cols=244  Identities=23%  Similarity=0.386  Sum_probs=189.9

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||+++....   ....+.+|+.+++++ +|+||+++++++......          ...+.+||||||
T Consensus        42 ~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~----------~~~~~~~lv~e~  108 (326)
T 2x7f_A           42 KGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP----------GMDDQLWLVMEF  108 (326)
T ss_dssp             EEEETTTCCEEEEEEEECCSS---TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC------------CCCCEEEEEEEC
T ss_pred             EEEECCCCCeEEEEEEecCcc---cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc----------cccceEEEEEEc
Confidence            367888999999999975432   245788999999999 799999999999863211          114578999999


Q ss_pred             CCC-ChhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccc
Q 012062           80 MDH-DLTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT  157 (472)
Q Consensus        80 ~~g-~l~~~~~~~-~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~  157 (472)
                      +++ +|.+++... ...+++..++.++.||+.||+|||++||+|+||||+||||+.++.+||+|||++....... ....
T Consensus       109 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~  187 (326)
T 2x7f_A          109 CGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV-GRRN  187 (326)
T ss_dssp             CTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC-----------
T ss_pred             CCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCc-cccc
Confidence            986 777776543 2468999999999999999999999999999999999999999999999999987654321 1233


Q ss_pred             cccccCCCCChhhhcC----CCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCcc
Q 012062          158 NRVITLWYRPPELLLG----ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY  233 (472)
Q Consensus       158 ~~~gt~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  233 (472)
                      ...+|..|+|||++..    ...++.++|||||||++|+|++|..||...+....+..+........             
T Consensus       188 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------  254 (326)
T 2x7f_A          188 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRL-------------  254 (326)
T ss_dssp             ---CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC-------------
T ss_pred             cccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccC-------------
Confidence            4568999999999863    24578999999999999999999999998887776665543211100             


Q ss_pred             ccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          234 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                     ....++..+++||.+||..||++|||+.|+|+|+||+.
T Consensus       255 ---------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~  292 (326)
T 2x7f_A          255 ---------------KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD  292 (326)
T ss_dssp             ---------------SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHC
T ss_pred             ---------------CccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhh
Confidence                           01235778999999999999999999999999999964


No 154
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=1e-40  Score=329.29  Aligned_cols=240  Identities=23%  Similarity=0.307  Sum_probs=182.1

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++...........+..+..+++.++|+||+++++++..                .+.+||||||+
T Consensus        43 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~----------------~~~~~lv~e~~  106 (318)
T 2dyl_A           43 KMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT----------------NTDVFIAMELM  106 (318)
T ss_dssp             EEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC----------------SSEEEEEECCC
T ss_pred             EEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec----------------CCcEEEEEecc
Confidence            36788899999999998664433333334455567888899999999999986                56899999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccc
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN-QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR  159 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~-giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~  159 (472)
                      ++.+..+.......+++..++.++.||+.||.|||++ ||+||||||+||||+.++.+||+|||++..+....  .....
T Consensus       107 ~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--~~~~~  184 (318)
T 2dyl_A          107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK--AKDRS  184 (318)
T ss_dssp             SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC--------------
T ss_pred             CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc--ccccc
Confidence            6555555554455799999999999999999999995 99999999999999999999999999997654322  22345


Q ss_pred             cccCCCCChhhhcC----CCCCCCCcchhhHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHhcCCCCCCCCccCCCCCccc
Q 012062          160 VITLWYRPPELLLG----ATKYGPAVDMWSVGCIFAELLNGKPILPGK-NEAEQLSKIFELCGSPDETIWPGVSKMPAYN  234 (472)
Q Consensus       160 ~gt~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~G~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  234 (472)
                      .+|..|+|||++..    ...++.++||||||||+|+|++|+.||... +..+.+..+........    +.        
T Consensus       185 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~----~~--------  252 (318)
T 2dyl_A          185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL----PG--------  252 (318)
T ss_dssp             --CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCC----CS--------
T ss_pred             CCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCC----Cc--------
Confidence            68999999999852    345788999999999999999999999874 45555555544321100    00        


Q ss_pred             cCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCC
Q 012062          235 HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFW  285 (472)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~  285 (472)
                                     ...++.++.+||.+||..||.+|||+.|||+|+||.
T Consensus       253 ---------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~  288 (318)
T 2dyl_A          253 ---------------HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIK  288 (318)
T ss_dssp             ---------------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHH
T ss_pred             ---------------cCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHH
Confidence                           013677899999999999999999999999999994


No 155
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=4.5e-41  Score=339.44  Aligned_cols=265  Identities=27%  Similarity=0.451  Sum_probs=198.3

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcC-----------CCCccceeEEeeCCCCCCCCCCCCCCCCc
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ-----------HENVIKLKEIVTSPGPERDEQGRPDGNKY   69 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~-----------hpnIv~l~~~~~~~~~~~~~~~~~~~~~~   69 (472)
                      +|++..+++.||||+++.+.   .....+.+|++++++++           |+||+++++++...+.            .
T Consensus        37 ~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~------------~  101 (373)
T 1q8y_A           37 LAKDMVNNTHVAMKIVRGDK---VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGP------------N  101 (373)
T ss_dssp             EEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEET------------T
T ss_pred             EEEecCCCcEEEEEEecCCc---cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCC------------C
Confidence            47788999999999997432   13456778999999886           8899999999986221            1


Q ss_pred             CCeEEEEEecCCCChhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEcC------CCCeEEee
Q 012062           70 RGSTYMVFEYMDHDLTGLADR-PGLRFTVPQIKCYMKQLLTGLHYCHVN-QVLHRDIKGSNLLIDN------EGNLKLAD  141 (472)
Q Consensus        70 ~~~~~iVmEy~~g~l~~~~~~-~~~~l~~~~i~~i~~Qll~aL~~LH~~-giiHrDLKp~NILl~~------~~~vkL~D  141 (472)
                      ...++|||||+.++|.+++.. ....+++..++.|+.||+.||+|||++ ||+||||||+||||+.      .+.+||+|
T Consensus       102 ~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~D  181 (373)
T 1q8y_A          102 GVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIAD  181 (373)
T ss_dssp             EEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECC
T ss_pred             CceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcc
Confidence            237899999998888887765 334599999999999999999999998 9999999999999953      33799999


Q ss_pred             ccceeeeccCCCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHh
Q 012062          142 FGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKN------EAEQLSKIFEL  215 (472)
Q Consensus       142 FG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~------~~~~~~~i~~~  215 (472)
                      ||+++....    .....++|+.|+|||++.+ ..++.++||||||||||+|++|+.||...+      ..+.+..+++.
T Consensus       182 fg~a~~~~~----~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  256 (373)
T 1q8y_A          182 LGNACWYDE----HYTNSIQTREYRSPEVLLG-APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL  256 (373)
T ss_dssp             CTTCEETTB----CCCSCCSCGGGCCHHHHHT-CCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred             cccccccCC----CCCCCCCCccccCcHHHhC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHh
Confidence            999987643    2334578999999999987 568999999999999999999999998764      56677777777


Q ss_pred             cCCCCCCCCccCC-------------CCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCC
Q 012062          216 CGSPDETIWPGVS-------------KMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSE  282 (472)
Q Consensus       216 ~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~  282 (472)
                      ++..+...+....             ....... .+..........+...++.++.+||++||..||++|||++|||+|+
T Consensus       257 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp  335 (373)
T 1q8y_A          257 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKF-WPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHP  335 (373)
T ss_dssp             HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCB-CCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCG
T ss_pred             cCCCCHHHHhccchhhhhcCCcchhcccccccc-cchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhCh
Confidence            7665432221110             0000000 0000001111112245678899999999999999999999999999


Q ss_pred             CCCC
Q 012062          283 YFWT  286 (472)
Q Consensus       283 ~f~~  286 (472)
                      ||..
T Consensus       336 ~f~~  339 (373)
T 1q8y_A          336 WLKD  339 (373)
T ss_dssp             GGTT
T ss_pred             hhhc
Confidence            9965


No 156
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=9.7e-41  Score=326.39  Aligned_cols=251  Identities=24%  Similarity=0.351  Sum_probs=185.0

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++...   .....+.+|+.++++++|+||+++++++.......   ...+.....+.+||||||+
T Consensus        24 ~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~lv~e~~   97 (303)
T 1zy4_A           24 KARNALDSRYYAIKKIRHTE---EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFV---KPMTAVKKKSTLFIQMEYC   97 (303)
T ss_dssp             EEEETTTCCEEEEEEEEEEH---HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCC---C------CEEEEEEEEECC
T ss_pred             EEEEcCCCeEEEEEEEeccH---HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchh---hhhcccccCCceEEEEecC
Confidence            36788899999999997532   23456789999999999999999999987532100   0001122256789999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCC-------
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDH-------  152 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~-------  152 (472)
                      ++ +|.+++......+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||++.......       
T Consensus        98 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  177 (303)
T 1zy4_A           98 ENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS  177 (303)
T ss_dssp             CSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC---------
T ss_pred             CCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhcccc
Confidence            85 7888777665678899999999999999999999999999999999999999999999999987654221       


Q ss_pred             ------CCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHhcCCCCCCCCc
Q 012062          153 ------NNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGK-NEAEQLSKIFELCGSPDETIWP  225 (472)
Q Consensus       153 ------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~  225 (472)
                            ........+|..|+|||++.+...++.++|||||||++|+|++   ||... +..+.+..+.......+..   
T Consensus       178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~---  251 (303)
T 1zy4_A          178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPD---  251 (303)
T ss_dssp             ----------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTT---
T ss_pred             ccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCcc---
Confidence                  1223345689999999999875578999999999999999998   45433 2333333333221111100   


Q ss_pred             cCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          226 GVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                             .....+..+++||++||..||++|||+.|+|+|+||..
T Consensus       252 -----------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (303)
T 1zy4_A          252 -----------------------FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV  289 (303)
T ss_dssp             -----------------------CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred             -----------------------ccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence                                   01235567899999999999999999999999999953


No 157
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=2.4e-40  Score=326.52  Aligned_cols=237  Identities=18%  Similarity=0.263  Sum_probs=186.5

Q ss_pred             CCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Chh
Q 012062            7 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLT   85 (472)
Q Consensus         7 tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l~   85 (472)
                      ....||+|+++...........+.+|+++|++++|+||+++++++..                 +.++|||||+.+ +|.
T Consensus        57 ~~~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----------------~~~~lv~e~~~~~~L~  119 (307)
T 3lb7_A           57 WHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-----------------DNLAIVTQWCEGSSLY  119 (307)
T ss_dssp             SSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----------------SSCEEEEECCSSCBHH
T ss_pred             ECCEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-----------------CcEEEEEecCCCCcHH
Confidence            34569999998765444455678899999999999999999998753                 357999999985 677


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeecc-CCCCccccccccCC
Q 012062           86 GLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY-DHNNTLTNRVITLW  164 (472)
Q Consensus        86 ~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~-~~~~~~~~~~gt~~  164 (472)
                      +++......+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.... ..........+|+.
T Consensus       120 ~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~gt~~  199 (307)
T 3lb7_A          120 KHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL  199 (307)
T ss_dssp             HHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC------------CCCCTT
T ss_pred             HHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceecccccccccccCCCCCcc
Confidence            77766667899999999999999999999999999999999999999999999999999975542 12223344578999


Q ss_pred             CCChhhhcC--CCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhh
Q 012062          165 YRPPELLLG--ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTM  242 (472)
Q Consensus       165 y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (472)
                      |+|||++..  ...++.++|||||||++|+|++|+.||...+..+.+..+..........                    
T Consensus       200 y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~--------------------  259 (307)
T 3lb7_A          200 WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDL--------------------  259 (307)
T ss_dssp             SCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCS--------------------
T ss_pred             eECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcch--------------------
Confidence            999999862  2457889999999999999999999999887777665554432221110                    


Q ss_pred             hhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCC
Q 012062          243 KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF  284 (472)
Q Consensus       243 ~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f  284 (472)
                          ...+..+++.+.+||.+||..||++|||+.||+++-+.
T Consensus       260 ----~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~  297 (307)
T 3lb7_A          260 ----SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL  297 (307)
T ss_dssp             ----TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHH
T ss_pred             ----hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHH
Confidence                01122467789999999999999999999999986543


No 158
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=2.1e-40  Score=323.50  Aligned_cols=240  Identities=29%  Similarity=0.451  Sum_probs=187.9

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++....  .....+.+|+.+++.++|+||+++++++..                .+.+||||||+
T Consensus        40 ~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----------------~~~~~lv~e~~  101 (295)
T 2clq_A           40 AGRDLSNQVRIAIKEIPERDS--RYSQPLHEEIALHKHLKHKNIVQYLGSFSE----------------NGFIKIFMEQV  101 (295)
T ss_dssp             EEEETTTCCEEEEEEEECCCC-----HHHHHHHHHHHTCCCTTBCCEEEEEEE----------------TTEEEEEEECC
T ss_pred             EEEECCCCeEEEEEEccCCch--HHHHHHHHHHHHHHhCCCCCEeeEeeEEEe----------------CCcEEEEEEeC
Confidence            367889999999999986532  345678899999999999999999999986                56899999999


Q ss_pred             CC-ChhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcC-CCCeEEeeccceeeeccCCCCcc
Q 012062           81 DH-DLTGLADRP--GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN-EGNLKLADFGLARSFSYDHNNTL  156 (472)
Q Consensus        81 ~g-~l~~~~~~~--~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~-~~~vkL~DFG~a~~~~~~~~~~~  156 (472)
                      .+ +|.+++...  ...+++..++.++.||+.||+|||+++|+|+||||+||||+. ++.+||+|||++....... ...
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-~~~  180 (295)
T 2clq_A          102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCT  180 (295)
T ss_dssp             SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------
T ss_pred             CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC-Ccc
Confidence            75 676666543  234678999999999999999999999999999999999987 8899999999998764322 222


Q ss_pred             ccccccCCCCChhhhcCC-CCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCcccc
Q 012062          157 TNRVITLWYRPPELLLGA-TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNH  235 (472)
Q Consensus       157 ~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  235 (472)
                      ....+|..|+|||++.+. ..++.++|||||||++|+|++|+.||...+................               
T Consensus       181 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---------------  245 (295)
T 2clq_A          181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP---------------  245 (295)
T ss_dssp             CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCC---------------
T ss_pred             cccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccc---------------
Confidence            345689999999998753 2378899999999999999999999976544332211111111000               


Q ss_pred             CCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          236 FKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                  .+...++.++.+||.+||..||++|||+.|+|+|+||..
T Consensus       246 ------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~  284 (295)
T 2clq_A          246 ------------EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKV  284 (295)
T ss_dssp             ------------CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC
T ss_pred             ------------cccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhh
Confidence                        011246778999999999999999999999999999964


No 159
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=2.9e-42  Score=349.04  Aligned_cols=258  Identities=15%  Similarity=0.144  Sum_probs=173.6

Q ss_pred             CceeccCCCEEEEEEeecCCcC-CCchhhHHHHHHHHHhc--CCCCcccee-------EEeeCCCCCCCCCCC-CCCCCc
Q 012062            1 MAREIKTGEIVALKKIRMDNEK-EGFPITAIREIKILKKL--QHENVIKLK-------EIVTSPGPERDEQGR-PDGNKY   69 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~-~~~~~~~~~Ei~il~~l--~hpnIv~l~-------~~~~~~~~~~~~~~~-~~~~~~   69 (472)
                      +|++..+++.||||+++..... ......+.+|+++++.|  +||||++++       +++...+........ ......
T Consensus        80 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~  159 (371)
T 3q60_A           80 LVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYA  159 (371)
T ss_dssp             EEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCSSSBCSCC---CC
T ss_pred             EEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCCeeeccCCcccce
Confidence            4678899999999999876432 22344566775555555  699988755       555443211000000 000001


Q ss_pred             CCeEEEEEecCCCChhhhhcCCCCCCCHHHH------HHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeecc
Q 012062           70 RGSTYMVFEYMDHDLTGLADRPGLRFTVPQI------KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFG  143 (472)
Q Consensus        70 ~~~~~iVmEy~~g~l~~~~~~~~~~l~~~~i------~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG  143 (472)
                      ...+|||||||+++|.+++......+....+      ..++.||+.||+|||+++|+||||||+||||+.++.+||+|||
T Consensus       160 ~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG  239 (371)
T 3q60_A          160 VANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVS  239 (371)
T ss_dssp             EEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGG
T ss_pred             eeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecc
Confidence            2458999999999998888754333444444      5667999999999999999999999999999999999999999


Q ss_pred             ceeeeccCCCCccccccccCCCCChhhhcCC-CCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCC
Q 012062          144 LARSFSYDHNNTLTNRVITLWYRPPELLLGA-TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDET  222 (472)
Q Consensus       144 ~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~  222 (472)
                      +++.....    .....+|+.|+|||++.+. ..++.++|||||||+||+|++|+.||.......             ..
T Consensus       240 ~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~-------------~~  302 (371)
T 3q60_A          240 ALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGI-------------KG  302 (371)
T ss_dssp             GEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTC-------------TT
T ss_pred             eeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCccc-------------cc
Confidence            99865421    1144668999999999742 358999999999999999999999998764321             00


Q ss_pred             CCccCCCCC-ccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCC
Q 012062          223 IWPGVSKMP-AYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF  284 (472)
Q Consensus       223 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f  284 (472)
                      .|....... ....+.         ...+..++..+.+||.+||..||++|||+.|+|+|+||
T Consensus       303 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f  356 (371)
T 3q60_A          303 SWKRPSLRVPGTDSLA---------FGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEF  356 (371)
T ss_dssp             CCCBCCTTSCCCCSCC---------CTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHH
T ss_pred             chhhhhhhhccccccc---------hhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHH
Confidence            011000000 000000         01123578899999999999999999999999999999


No 160
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=1.5e-40  Score=320.44  Aligned_cols=227  Identities=21%  Similarity=0.285  Sum_probs=188.8

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Ch
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DL   84 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l   84 (472)
                      .++..||||+++.....   ...+.+|++++++++|+||+++++++..                .+.+||||||+++ +|
T Consensus        30 ~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~~~~~L   90 (268)
T 3sxs_A           30 KGQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYGVCSK----------------EYPIYIVTEYISNGCL   90 (268)
T ss_dssp             TTTEEEEEEEECBTTBC---HHHHHHHHHHHHHCCCTTBCCEEEEECS----------------SSSEEEEEECCTTCBH
T ss_pred             cCceeEEEEEeccCCCc---HHHHHHHHHHHHhCCCCCEeeEEEEEcc----------------CCceEEEEEccCCCcH
Confidence            36678999999755332   3568899999999999999999999976                5578999999985 57


Q ss_pred             hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccccccCC
Q 012062           85 TGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLW  164 (472)
Q Consensus        85 ~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~  164 (472)
                      .+++......+++.+++.|+.||+.||+|||+++|+||||||+|||++.++.+||+|||++...............+|..
T Consensus        91 ~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~  170 (268)
T 3sxs_A           91 LNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVK  170 (268)
T ss_dssp             HHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGG
T ss_pred             HHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcc
Confidence            77776655569999999999999999999999999999999999999999999999999998765443333344455778


Q ss_pred             CCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhhh
Q 012062          165 YRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMK  243 (472)
Q Consensus       165 y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (472)
                      |+|||++.+ ..++.++|||||||++|+|++ |+.||...+..+....+.........                      
T Consensus       171 y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------  227 (268)
T 3sxs_A          171 WSAPEVFHY-FKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRP----------------------  227 (268)
T ss_dssp             GCCHHHHHH-SEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC----------------------
T ss_pred             cCCHHHHhc-cCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCC----------------------
Confidence            999999976 568899999999999999999 99999998888877776543211110                      


Q ss_pred             hhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          244 RRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       244 ~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                             ..+++.+.+||.+||..||++|||+.|++++
T Consensus       228 -------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          228 -------HLASDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             -------TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             -------CcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                   1246689999999999999999999999975


No 161
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=1.9e-40  Score=326.93  Aligned_cols=234  Identities=23%  Similarity=0.343  Sum_probs=185.0

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||++....  ......+.+|+++|++|+|+||+++++++.+                .+.+||||||+
T Consensus        28 ~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----------------~~~~~lv~e~~   89 (310)
T 3s95_A           28 KVTHRETGEVMVMKELIRFD--EETQRTFLKEVKVMRCLEHPNVLKFIGVLYK----------------DKRLNFITEYI   89 (310)
T ss_dssp             EEEETTTCCEEEEEEESCCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE----------------TTEEEEEEECC
T ss_pred             EEEECCCCcEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCcCcccEEEEEec----------------CCeeEEEEEec
Confidence            36788999999999986432  2345678899999999999999999999986                56899999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCc----
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNT----  155 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~----  155 (472)
                      ++ +|.+++......+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.+.......    
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  169 (310)
T 3s95_A           90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR  169 (310)
T ss_dssp             TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC----------
T ss_pred             CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccc
Confidence            86 7777777656679999999999999999999999999999999999999999999999999998764332211    


Q ss_pred             ---------cccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCcc
Q 012062          156 ---------LTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPG  226 (472)
Q Consensus       156 ---------~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  226 (472)
                               ....++|+.|+|||++.+ ..++.++|||||||++|+|++|..+|.........                 
T Consensus       170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~-----------------  231 (310)
T 3s95_A          170 SLKKPDRKKRYTVVGNPYWMAPEMING-RSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD-----------------  231 (310)
T ss_dssp             ----------CCCCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT-----------------
T ss_pred             cccccccccccccCCCcceeCHHHhcC-CCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH-----------------
Confidence                     124578999999999986 67899999999999999999999888653221000                 


Q ss_pred             CCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          227 VSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                               ... .............++..+.+||.+||..||++|||+.|+++
T Consensus       232 ---------~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          232 ---------FGL-NVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             ---------SSB-CHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------Hhh-hhhccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                     000 00000011112456778999999999999999999999986


No 162
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=1.6e-40  Score=336.50  Aligned_cols=229  Identities=25%  Similarity=0.386  Sum_probs=186.3

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-C
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-D   83 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~   83 (472)
                      .++..||||+++.... ......+.+|+.+|+++ +|||||++++++..                .+.+||||||+.+ +
T Consensus       111 ~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~----------------~~~~~lv~e~~~~g~  173 (370)
T 2psq_A          111 KEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ----------------DGPLYVIVEYASKGN  173 (370)
T ss_dssp             TCEEEEEEEECCTTCB-HHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS----------------SSSCEEEEECCTTCB
T ss_pred             CcceeEEEEEecCCcC-HHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc----------------CCCEEEEEEcCCCCC
Confidence            4566899999976532 22345688999999999 89999999999976                5578999999986 7


Q ss_pred             hhhhhcCCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeee
Q 012062           84 LTGLADRPG---------------LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF  148 (472)
Q Consensus        84 l~~~~~~~~---------------~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~  148 (472)
                      |.+++....               ..+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.+
T Consensus       174 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  253 (370)
T 2psq_A          174 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI  253 (370)
T ss_dssp             HHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred             HHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCccc
Confidence            777665432               35899999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCC-CccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCcc
Q 012062          149 SYDHN-NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPG  226 (472)
Q Consensus       149 ~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  226 (472)
                      ..... .......+|+.|+|||++.+ ..++.++||||||||+|+|++ |..||.+.+..+.+..+.......       
T Consensus       254 ~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~-------  325 (370)
T 2psq_A          254 NNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD-------  325 (370)
T ss_dssp             TCCCTTCTTTTTTSCGGGCCHHHHHT-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC-------
T ss_pred             CcccceecccCCCcccceECHhHhcC-CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCC-------
Confidence            54322 22233456789999999986 578999999999999999999 999999988777666554321110       


Q ss_pred             CCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          227 VSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                            ....++..+.+||.+||..||++|||+.|++++
T Consensus       326 ----------------------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          326 ----------------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             ----------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                                  012467789999999999999999999999863


No 163
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=1.3e-40  Score=323.41  Aligned_cols=227  Identities=23%  Similarity=0.354  Sum_probs=189.1

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Ch
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DL   84 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l   84 (472)
                      .++..||||+++.....   ...+.+|++++++++|+||+++++++..                .+.+||||||+++ +|
T Consensus        46 ~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~~~~~L  106 (283)
T 3gen_A           46 RGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTK----------------QRPIFIITEYMANGCL  106 (283)
T ss_dssp             TTTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECS----------------SSSEEEEECCCTTCBH
T ss_pred             cCCCeEEEEEecCCCCC---HHHHHHHHHHHhcCCCCCEeeEEEEEec----------------CCCeEEEEeccCCCcH
Confidence            36778999999855332   3568899999999999999999999976                5578999999975 77


Q ss_pred             hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccccccCC
Q 012062           85 TGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLW  164 (472)
Q Consensus        85 ~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~  164 (472)
                      .+++......+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||+++..............+|..
T Consensus       107 ~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~  186 (283)
T 3gen_A          107 LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR  186 (283)
T ss_dssp             HHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGG
T ss_pred             HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcc
Confidence            77776655579999999999999999999999999999999999999999999999999997654332223333455788


Q ss_pred             CCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhhh
Q 012062          165 YRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMK  243 (472)
Q Consensus       165 y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (472)
                      |+|||++.+ ..++.++|||||||++|+|++ |+.||...+..+....+.........                      
T Consensus       187 y~aPE~~~~-~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------  243 (283)
T 3gen_A          187 WSPPEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP----------------------  243 (283)
T ss_dssp             GCCHHHHHH-CCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC----------------------
T ss_pred             cCCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCC----------------------
Confidence            999999986 568999999999999999998 99999999988887777653221111                      


Q ss_pred             hhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          244 RRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       244 ~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                             ..+++.+.+||.+||..||++|||+.|+++|
T Consensus       244 -------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          244 -------HLASEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             -------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             -------CcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence                   1346789999999999999999999999874


No 164
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.3e-40  Score=336.62  Aligned_cols=234  Identities=19%  Similarity=0.291  Sum_probs=187.7

Q ss_pred             eccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-
Q 012062            4 EIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-   82 (472)
Q Consensus         4 ~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-   82 (472)
                      +..+++.||||+++..... .....+.+|+.++++++|+|||++++++..                ...+|||||||.+ 
T Consensus        97 ~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~----------------~~~~~lv~e~~~~g  159 (367)
T 3l9p_A           97 NDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIVRCIGVSLQ----------------SLPRFILLELMAGG  159 (367)
T ss_dssp             ---CCEEEEEEECCSSCCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEECS----------------SSSCEEEEECCTTE
T ss_pred             CCCcceeEEEEecccccCh-hhHHHHHHHHHHHHhCCCCCCCeEEEEEec----------------CCCCEEEEEeCCCC
Confidence            5568889999999754322 234567899999999999999999999976                4567999999975 


Q ss_pred             ChhhhhcCCC------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCC---CeEEeeccceeeeccCC-
Q 012062           83 DLTGLADRPG------LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG---NLKLADFGLARSFSYDH-  152 (472)
Q Consensus        83 ~l~~~~~~~~------~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~---~vkL~DFG~a~~~~~~~-  152 (472)
                      +|.+++....      ..+++.+++.|+.||+.||+|||++||+||||||+||||+.++   .+||+|||+++.+.... 
T Consensus       160 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~  239 (367)
T 3l9p_A          160 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGY  239 (367)
T ss_dssp             EHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSS
T ss_pred             CHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccc
Confidence            7777665422      3589999999999999999999999999999999999999555   49999999997553322 


Q ss_pred             CCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCC
Q 012062          153 NNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMP  231 (472)
Q Consensus       153 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  231 (472)
                      ........+|+.|+|||++.+ ..++.++||||||||+|+|++ |..||...+..+.+..+........           
T Consensus       240 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~-----------  307 (367)
T 3l9p_A          240 YRKGGCAMLPVKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-----------  307 (367)
T ss_dssp             CTTCCGGGSCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC-----------
T ss_pred             cccCCCcCCcccEECHHHhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-----------
Confidence            222333567899999999986 578999999999999999998 9999999998887777754321110           


Q ss_pred             ccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCC
Q 012062          232 AYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF  284 (472)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f  284 (472)
                                        ...++..+.+||.+||..||++|||+.||+++-++
T Consensus       308 ------------------~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~  342 (367)
T 3l9p_A          308 ------------------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  342 (367)
T ss_dssp             ------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ------------------CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence                              12366789999999999999999999999987554


No 165
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=1.9e-40  Score=322.36  Aligned_cols=226  Identities=21%  Similarity=0.345  Sum_probs=174.8

Q ss_pred             CCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Chh
Q 012062            7 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLT   85 (472)
Q Consensus         7 tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l~   85 (472)
                      ++..||||+++.... ......+.+|+.++++++||||+++++++..                 +.+||||||+++ +|.
T Consensus        42 ~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----------------~~~~lv~e~~~~~~L~  103 (281)
T 1mp8_A           42 PALAVAIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVKLIGVITE-----------------NPVWIIMELCTLGELR  103 (281)
T ss_dssp             CCEEEEEEECTTTTS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-----------------SSCEEEEECCTTEEHH
T ss_pred             CceEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCccceEEEEEcc-----------------CccEEEEecCCCCCHH
Confidence            355799999875432 2245568899999999999999999999853                 357999999996 777


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccccccCCC
Q 012062           86 GLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWY  165 (472)
Q Consensus        86 ~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y  165 (472)
                      +++......+++..++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||+++..............+|+.|
T Consensus       104 ~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y  183 (281)
T 1mp8_A          104 SFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW  183 (281)
T ss_dssp             HHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGG
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccccccccCCCcccc
Confidence            77766655799999999999999999999999999999999999999999999999999987654333333334557889


Q ss_pred             CChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhhhh
Q 012062          166 RPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKR  244 (472)
Q Consensus       166 ~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (472)
                      +|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+.+..+......+                         
T Consensus       184 ~aPE~~~~-~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~-------------------------  237 (281)
T 1mp8_A          184 MAPESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-------------------------  237 (281)
T ss_dssp             CCHHHHHH-CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC-------------------------
T ss_pred             cChhhccc-CCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCC-------------------------
Confidence            99999976 568899999999999999996 999999988877777665422111                         


Q ss_pred             hHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          245 RVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       245 ~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                          ....++..+.+||.+||..||++|||+.|+++
T Consensus       238 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  269 (281)
T 1mp8_A          238 ----MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  269 (281)
T ss_dssp             ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                01246778999999999999999999999986


No 166
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=3.1e-40  Score=341.41  Aligned_cols=238  Identities=28%  Similarity=0.407  Sum_probs=178.1

Q ss_pred             eeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCC
Q 012062            3 REIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD   81 (472)
Q Consensus         3 ~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~   81 (472)
                      ++..+|+.||||++..+.     ...+.+|+++|+++ +|||||++++++..                .+.+|||||||+
T Consensus        34 ~~~~~g~~vAvK~~~~~~-----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~----------------~~~~~lv~E~~~   92 (434)
T 2rio_A           34 QGSFQGRPVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRYYCSETT----------------DRFLYIALELCN   92 (434)
T ss_dssp             EEESSSSEEEEEEEEGGG-----HHHHHHHHHHHHHHTTSTTBCCEEEEEEC----------------SSEEEEEECCCS
T ss_pred             EEEECCeEEEEEEEcHHH-----HHHHHHHHHHHHhccCCCCcCeEEEEEec----------------CCeEEEEEecCC
Confidence            456789999999987532     34578999999876 89999999999986                568999999999


Q ss_pred             CChhhhhcCCCCC------CCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCC-------------CCeEEeec
Q 012062           82 HDLTGLADRPGLR------FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE-------------GNLKLADF  142 (472)
Q Consensus        82 g~l~~~~~~~~~~------l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~-------------~~vkL~DF  142 (472)
                      ++|.+++......      .++..++.|+.||+.||+|||+++|+||||||+||||+.+             ..+||+||
T Consensus        93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF  172 (434)
T 2rio_A           93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF  172 (434)
T ss_dssp             EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred             CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence            9888887654321      1233467899999999999999999999999999999754             37999999


Q ss_pred             cceeeeccCCCC---ccccccccCCCCChhhhcC------CCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 012062          143 GLARSFSYDHNN---TLTNRVITLWYRPPELLLG------ATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI  212 (472)
Q Consensus       143 G~a~~~~~~~~~---~~~~~~gt~~y~aPE~l~~------~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i  212 (472)
                      |+++........   .....++|+.|+|||++.+      ...++.++||||||||+|+|++ |..||......+  ..+
T Consensus       173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i  250 (434)
T 2rio_A          173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNI  250 (434)
T ss_dssp             TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHH
T ss_pred             ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HHH
Confidence            999876543221   2234578999999999965      2458899999999999999999 999997765443  223


Q ss_pred             HHhcCCCCCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          213 FELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                      ..........     ..      .            ....++.++++||.+||..||++|||+.|||+|+|||.
T Consensus       251 ~~~~~~~~~~-----~~------~------------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          251 IRGIFSLDEM-----KC------L------------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             HHTCCCCCCC-----TT------C------------CCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             hcCCCCcccc-----cc------c------------ccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence            3221111100     00      0            01235678999999999999999999999999999974


No 167
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=1.7e-40  Score=328.93  Aligned_cols=245  Identities=19%  Similarity=0.273  Sum_probs=176.0

Q ss_pred             ceeccCCC---EEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEe
Q 012062            2 AREIKTGE---IVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFE   78 (472)
Q Consensus         2 a~~~~tg~---~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmE   78 (472)
                      |++..+++   .||||+++...........+.+|++++++++|+||+++++++.......          ....+|+|||
T Consensus        42 ~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~----------~~~~~~~v~e  111 (323)
T 3qup_A           42 AQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG----------RLPIPMVILP  111 (323)
T ss_dssp             EEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----------------CEEEEEE
T ss_pred             EEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc----------CCCccEEEEE
Confidence            45555654   8999999876544445677889999999999999999999998632110          0123599999


Q ss_pred             cCCC-ChhhhhcC-----CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCC
Q 012062           79 YMDH-DLTGLADR-----PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDH  152 (472)
Q Consensus        79 y~~g-~l~~~~~~-----~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~  152 (472)
                      |+.+ +|.+++..     ....+++.+++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+++......
T Consensus       112 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~  191 (323)
T 3qup_A          112 FMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD  191 (323)
T ss_dssp             CCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred             eccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccccccccc
Confidence            9996 66665542     22258999999999999999999999999999999999999999999999999997654322


Q ss_pred             C-CccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCC
Q 012062          153 N-NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM  230 (472)
Q Consensus       153 ~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  230 (472)
                      . .......+|..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+....+........          
T Consensus       192 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~----------  260 (323)
T 3qup_A          192 YYRQGCASKLPVKWLALESLAD-NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQ----------  260 (323)
T ss_dssp             ---------CCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC----------
T ss_pred             cccccccccCcccccCchhhcC-CCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCCC----------
Confidence            2 22223345778999999987 568999999999999999999 9999999888887777754321111          


Q ss_pred             CccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCC-------HHHHhcCCCCCC
Q 012062          231 PAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRIS-------AKDALDSEYFWT  286 (472)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t-------~~elL~h~~f~~  286 (472)
                                         ...++.++.+||.+||..||++|||       ++++++|+|+..
T Consensus       261 -------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~  304 (323)
T 3qup_A          261 -------------------PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS  304 (323)
T ss_dssp             -------------------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----
T ss_pred             -------------------CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcC
Confidence                               1236678999999999999999999       788889999854


No 168
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=2.9e-40  Score=331.95  Aligned_cols=233  Identities=22%  Similarity=0.375  Sum_probs=186.2

Q ss_pred             eccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC
Q 012062            4 EIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH   82 (472)
Q Consensus         4 ~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g   82 (472)
                      +..+++.||||+++..... .....+.+|+++|+++ +|||||++++++...               ...+|||||||.+
T Consensus        48 ~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---------------~~~~~iv~e~~~~  111 (359)
T 3vhe_A           48 KTATCRTVAVKMLKEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKP---------------GGPLMVIVEFCKF  111 (359)
T ss_dssp             STTCEEEEEEEEECTTCCH-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECST---------------TSCCEEEEECCTT
T ss_pred             ccccceEEEEEEecCcCCH-HHHHHHHHHHHHHHhhcCCcceeeeeeeeecC---------------CCceEEEEEecCC
Confidence            5678899999999754322 2345688999999999 799999999999762               3357999999986


Q ss_pred             -ChhhhhcCCCC-----------------------------------------------------------------CCC
Q 012062           83 -DLTGLADRPGL-----------------------------------------------------------------RFT   96 (472)
Q Consensus        83 -~l~~~~~~~~~-----------------------------------------------------------------~l~   96 (472)
                       +|.+++.....                                                                 .++
T Consensus       112 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  191 (359)
T 3vhe_A          112 GNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLT  191 (359)
T ss_dssp             EEHHHHHHTTTTSBCSCC------------------------------------------------------CTTTTCBC
T ss_pred             CcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchhccccC
Confidence             77776654321                                                                 289


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC-CccccccccCCCCChhhhcCCC
Q 012062           97 VPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN-NTLTNRVITLWYRPPELLLGAT  175 (472)
Q Consensus        97 ~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~  175 (472)
                      +..++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.+..... .......+|+.|+|||++.+ .
T Consensus       192 ~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~  270 (359)
T 3vhe_A          192 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-R  270 (359)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHH-C
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcC-C
Confidence            999999999999999999999999999999999999999999999999976543222 22334567889999999986 6


Q ss_pred             CCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhhhhhHHHHhhhcc
Q 012062          176 KYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFD  254 (472)
Q Consensus       176 ~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (472)
                      .++.++||||||||+|+|++ |..||.+.+..+.+............                            ...++
T Consensus       271 ~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  322 (359)
T 3vhe_A          271 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA----------------------------PDYTT  322 (359)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCC----------------------------CTTCC
T ss_pred             CCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCC----------------------------CCCCC
Confidence            78999999999999999998 99999988765555554443211110                            11356


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          255 RHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       255 ~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                      .++.+||.+||..||++|||+.||++|
T Consensus       323 ~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          323 PEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            789999999999999999999999975


No 169
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=1.9e-39  Score=315.94  Aligned_cols=230  Identities=20%  Similarity=0.296  Sum_probs=184.8

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCc-----hhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEE
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGF-----PITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYM   75 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~-----~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i   75 (472)
                      +|++..+++.||||++.........     ...+.+|++++++++|+||+++++++...                  .+|
T Consensus        37 ~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------------------~~l   98 (287)
T 4f0f_A           37 KGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP------------------PRM   98 (287)
T ss_dssp             EEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT------------------TEE
T ss_pred             EEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC------------------CeE
Confidence            3678899999999999765433221     25678999999999999999999999651                  279


Q ss_pred             EEecCC-CChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEEcCCCC-----eEEeeccceee
Q 012062           76 VFEYMD-HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ--VLHRDIKGSNLLIDNEGN-----LKLADFGLARS  147 (472)
Q Consensus        76 VmEy~~-g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~g--iiHrDLKp~NILl~~~~~-----vkL~DFG~a~~  147 (472)
                      ||||+. ++|.+.+......+++..++.++.||+.||+|||+++  |+||||||+||||+.++.     +||+|||+++.
T Consensus        99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~  178 (287)
T 4f0f_A           99 VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ  178 (287)
T ss_dssp             EEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBC
T ss_pred             EEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcccc
Confidence            999998 5787877776667999999999999999999999999  999999999999988776     99999999975


Q ss_pred             eccCCCCccccccccCCCCChhhhcC-CCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHH--HHHHHHhcCCCCCCCC
Q 012062          148 FSYDHNNTLTNRVITLWYRPPELLLG-ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQ--LSKIFELCGSPDETIW  224 (472)
Q Consensus       148 ~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~--~~~i~~~~~~~~~~~~  224 (472)
                      ...    ......+|+.|+|||++.. ...++.++|||||||++|+|++|+.||...+....  ...+......+.    
T Consensus       179 ~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~----  250 (287)
T 4f0f_A          179 SVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT----  250 (287)
T ss_dssp             CSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCC----
T ss_pred             ccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCC----
Confidence            432    3344678999999999843 24468899999999999999999999987654433  332222111000    


Q ss_pred             ccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          225 PGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                              ....++..+.+||.+||..||++|||+.|+++
T Consensus       251 ------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          251 ------------------------IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             ------------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------------------CCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                                    11246778999999999999999999999985


No 170
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.1e-39  Score=331.64  Aligned_cols=228  Identities=24%  Similarity=0.378  Sum_probs=187.0

Q ss_pred             CCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Ch
Q 012062            7 TGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DL   84 (472)
Q Consensus         7 tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l   84 (472)
                      +++.||||+++..... .....+.+|+++++++ +|+|||++++++..                .+.+||||||+++ +|
T Consensus       100 ~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~----------------~~~~~lv~e~~~~g~L  162 (382)
T 3tt0_A          100 RVTKVAVKMLKSDATE-KDLSDLISEMEMMKMIGKHKNIINLLGACTQ----------------DGPLYVIVEYASKGNL  162 (382)
T ss_dssp             CEEEEEEEEECTTCCH-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----------------SSSCEEEEECCTTCBH
T ss_pred             cceEEEEEeeccccCH-HHHHHHHHHHHHHHHhcCCchhhhheeeecc----------------CCceEEEEEecCCCcH
Confidence            4468999999865322 2346788999999999 89999999999976                5568999999986 77


Q ss_pred             hhhhcCCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeec
Q 012062           85 TGLADRPG---------------LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFS  149 (472)
Q Consensus        85 ~~~~~~~~---------------~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~  149 (472)
                      .+++....               ..+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++...
T Consensus       163 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~  242 (382)
T 3tt0_A          163 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH  242 (382)
T ss_dssp             HHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSS
T ss_pred             HHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCcccccc
Confidence            77665432               358999999999999999999999999999999999999999999999999998664


Q ss_pred             cCCC-CccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccC
Q 012062          150 YDHN-NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGV  227 (472)
Q Consensus       150 ~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  227 (472)
                      .... .......+|..|+|||++.+ ..++.++||||||||+|+|++ |..||.+.+..+.+..+........       
T Consensus       243 ~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~-------  314 (382)
T 3tt0_A          243 HIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK-------  314 (382)
T ss_dssp             CCCTTCCCTTCCCGGGGSCHHHHHS-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC-------
T ss_pred             cccccccccCCCCCcceeCHHHhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-------
Confidence            3322 22333456889999999986 678999999999999999999 9999999888777766654321110       


Q ss_pred             CCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          228 SKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                            ...++.++.+||++||..||++|||+.||+++
T Consensus       315 ----------------------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          315 ----------------------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             ----------------------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------------------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                                  01367789999999999999999999999864


No 171
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=2.1e-40  Score=336.36  Aligned_cols=232  Identities=22%  Similarity=0.355  Sum_probs=188.0

Q ss_pred             ceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCC
Q 012062            2 AREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD   81 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~   81 (472)
                      |++..+++.||||+++.... ......+.+|+++|++++|||||++++++..                .+.+||||||++
T Consensus       133 ~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----------------~~~~~lv~e~~~  195 (377)
T 3cbl_A          133 GRLRADNTLVAVKSCRETLP-PDLKAKFLQEARILKQYSHPNIVRLIGVCTQ----------------KQPIYIVMELVQ  195 (377)
T ss_dssp             EEETTTCCEEEEEECCTTSC-HHHHTTTTHHHHHHTTCCCTTBCCEEEEECS----------------SSSCEEEEECCT
T ss_pred             EEEecCCeEEEEEEccccCC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEec----------------CCCcEEEEEcCC
Confidence            67778999999999975432 2234467799999999999999999999976                456899999998


Q ss_pred             -CChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcc-ccc
Q 012062           82 -HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTL-TNR  159 (472)
Q Consensus        82 -g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~-~~~  159 (472)
                       ++|.+++......+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.......... ...
T Consensus       196 ~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~  275 (377)
T 3cbl_A          196 GGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLR  275 (377)
T ss_dssp             TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCC
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCC
Confidence             477777766555699999999999999999999999999999999999999999999999999976433211111 122


Q ss_pred             cccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          160 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       160 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                      .++..|+|||++.. ..++.++|||||||++|||++ |..||.+.+..+....+......+.                  
T Consensus       276 ~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~------------------  336 (377)
T 3cbl_A          276 QVPVKWTAPEALNY-GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPC------------------  336 (377)
T ss_dssp             EEEGGGSCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCC------------------
T ss_pred             CCCcCcCCHhHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC------------------
Confidence            34778999999976 568899999999999999998 9999999888776665543211110                  


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                 ...+++++.+||.+||..||++|||+.+|++
T Consensus       337 -----------~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          337 -----------PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             -----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                       1135678999999999999999999999985


No 172
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=5.8e-40  Score=319.47  Aligned_cols=231  Identities=20%  Similarity=0.306  Sum_probs=192.0

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++.+.   .....+.+|++++++++|+||+++++++..                .+.+||||||+
T Consensus        31 ~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----------------~~~~~~v~e~~   91 (288)
T 3kfa_A           31 EGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR----------------EPPFYIITEFM   91 (288)
T ss_dssp             EEEEGGGTEEEEEEEECSCS---THHHHHHHHHHHHHHCCCTTBCCEEEEECS----------------SSSEEEEEECC
T ss_pred             EeEecCCCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEcc----------------CCCEEEEEEcC
Confidence            36788899999999997543   235678899999999999999999999976                55789999999


Q ss_pred             CC-ChhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           81 DH-DLTGLADR-PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        81 ~g-~l~~~~~~-~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      ++ +|.+++.. ....+++..++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||++.............
T Consensus        92 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~  171 (288)
T 3kfa_A           92 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG  171 (288)
T ss_dssp             TTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETT
T ss_pred             CCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccC
Confidence            95 77777754 33458999999999999999999999999999999999999999999999999997665444333444


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK  237 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  237 (472)
                      ..+|..|+|||++.+ ..++.++|||||||++|+|++ |..||...+.......+........                 
T Consensus       172 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------------  233 (288)
T 3kfa_A          172 AKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-----------------  233 (288)
T ss_dssp             EEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCC-----------------
T ss_pred             CccccCcCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCC-----------------
Confidence            456888999999976 568999999999999999999 9999998887776666543211110                 


Q ss_pred             CchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          238 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                  ...+++.+.+||++||..||++|||+.|+++
T Consensus       234 ------------~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          234 ------------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             ------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------CCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence                        1246778999999999999999999999985


No 173
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=7.8e-40  Score=319.40  Aligned_cols=235  Identities=20%  Similarity=0.239  Sum_probs=186.4

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||++......    ..+.+|+++++.++|++++..+..+...               ...+||||||+
T Consensus        27 ~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~~---------------~~~~~lv~e~~   87 (296)
T 4hgt_A           27 LGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGAE---------------GDYNVMVMELL   87 (296)
T ss_dssp             EEEETTTTEEEEEEEEEC---C----CCHHHHHHHHHHHTTSTTCCCEEEEEEE---------------TTEEEEEEECC
T ss_pred             EEEEcCCCceEEEEeecccccc----hHHHHHHHHHHHhcCCCCCCeeeeecCC---------------CCceEEEEEcc
Confidence            3678899999999998765433    3577999999999998888777766431               55789999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEE---cCCCCeEEeeccceeeeccCCC----
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI---DNEGNLKLADFGLARSFSYDHN----  153 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl---~~~~~vkL~DFG~a~~~~~~~~----  153 (472)
                      .++|.+++......+++.+++.++.||+.||+|||+++|+||||||+||||   +.++.+||+|||+++.......    
T Consensus        88 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~  167 (296)
T 4hgt_A           88 GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI  167 (296)
T ss_dssp             CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBC
T ss_pred             CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccC
Confidence            888888887655679999999999999999999999999999999999999   7888999999999987654332    


Q ss_pred             --CccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChH---HHHHHHHHhcCCCCCCCCccCC
Q 012062          154 --NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEA---EQLSKIFELCGSPDETIWPGVS  228 (472)
Q Consensus       154 --~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~  228 (472)
                        .......+|..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..   ..+..+....            
T Consensus       168 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------------  234 (296)
T 4hgt_A          168 PYRENKNLTGTARYASINTHLG-IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK------------  234 (296)
T ss_dssp             CCCCSCCCCSCGGGCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH------------
T ss_pred             CCCcccccCCCccccchHHhcC-CCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccc------------
Confidence              12234578999999999987 56899999999999999999999999875432   1222221110            


Q ss_pred             CCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          229 KMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                   ...........+++++.+||.+||..||++|||+.++++
T Consensus       235 -------------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          235 -------------MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             -------------HHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             -------------ccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence                         011122333567889999999999999999999999985


No 174
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=5.6e-40  Score=315.84  Aligned_cols=230  Identities=21%  Similarity=0.331  Sum_probs=188.7

Q ss_pred             ceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCC
Q 012062            2 AREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD   81 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~   81 (472)
                      |++. +++.||||+++.....   ...+.+|++++++++|+||+++++++..                .+.+||||||++
T Consensus        27 ~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~~   86 (267)
T 3t9t_A           27 GYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLE----------------QAPICLVTEFME   86 (267)
T ss_dssp             EEET-TTEEEEEEEECTTTBC---HHHHHHHHHHHHTCCCTTBCCEEEEECS----------------SSSCEEEECCCT
T ss_pred             EEec-CCCeEEEEEccccCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEcc----------------CCCeEEEEeCCC
Confidence            3443 6788999999865432   3578899999999999999999999976                456899999998


Q ss_pred             C-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccccc
Q 012062           82 H-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV  160 (472)
Q Consensus        82 g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~  160 (472)
                      + +|.+++......+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++...............
T Consensus        87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  166 (267)
T 3t9t_A           87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK  166 (267)
T ss_dssp             TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTT
T ss_pred             CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccccccccccc
Confidence            5 777777666567999999999999999999999999999999999999999999999999998765432222223345


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCc
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS  239 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (472)
                      +|..|+|||++.+ ..++.++|||||||++|+|++ |+.||...+..+....+........                   
T Consensus       167 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~-------------------  226 (267)
T 3t9t_A          167 FPVKWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK-------------------  226 (267)
T ss_dssp             CCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC-------------------
T ss_pred             ccccccChhhhcC-CCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCC-------------------
Confidence            6788999999976 568899999999999999999 8999999888877776654321110                   


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                ...++..+.+||.+||..||++|||+.|++++
T Consensus       227 ----------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          227 ----------PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             ----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------CccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                      01356789999999999999999999999863


No 175
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=4.3e-40  Score=328.48  Aligned_cols=229  Identities=21%  Similarity=0.327  Sum_probs=186.0

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Ch
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DL   84 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l   84 (472)
                      .+++.||||+++.... ......+.+|++++++++|+||+++++++..                .+.+||||||+++ +|
T Consensus        75 ~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----------------~~~~~lv~e~~~~~~L  137 (343)
T 1luf_A           75 EPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDNPNIVKLLGVCAV----------------GKPMCLLFEYMAYGDL  137 (343)
T ss_dssp             SSEEEEEEEECCTTCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECS----------------SSSCEEEEECCTTCBH
T ss_pred             CCceeEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc----------------CCceEEEEecCCCCcH
Confidence            5668999999985532 2245567899999999999999999999976                4578999999986 77


Q ss_pred             hhhhcCCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEee
Q 012062           85 TGLADRPG-----------------------LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLAD  141 (472)
Q Consensus        85 ~~~~~~~~-----------------------~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~D  141 (472)
                      .+++....                       ..+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|
T Consensus       138 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~D  217 (343)
T 1luf_A          138 NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIAD  217 (343)
T ss_dssp             HHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECC
T ss_pred             HHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEee
Confidence            77665421                       4689999999999999999999999999999999999999999999999


Q ss_pred             ccceeeeccCCC-CccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCC
Q 012062          142 FGLARSFSYDHN-NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSP  219 (472)
Q Consensus       142 FG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~  219 (472)
                      ||+++....... .......+|+.|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+.+..+.+.....
T Consensus       218 fg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~  296 (343)
T 1luf_A          218 FGLSRNIYSADYYKADGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILA  296 (343)
T ss_dssp             CSCHHHHTGGGCBC----CCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCC
T ss_pred             cCCCcccccCccccccCCCcccceecChhhhcc-CCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCC
Confidence            999976543221 22234466889999999886 568999999999999999999 999999988877777665421110


Q ss_pred             CCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          220 DETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                                   ....++..+.+||++||..||++|||+.|++++
T Consensus       297 -----------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          297 -----------------------------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             -----------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------------------------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence                                         012467789999999999999999999999863


No 176
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=3.1e-39  Score=315.40  Aligned_cols=235  Identities=20%  Similarity=0.236  Sum_probs=187.6

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||++......    ..+.+|+.+++.++|++++..+..+...               ...+||||||+
T Consensus        27 ~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~~---------------~~~~~lv~e~~   87 (296)
T 3uzp_A           27 LGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGAE---------------GDYNVMVMELL   87 (296)
T ss_dssp             EEEETTTTEEEEEEEEESCSSC----CHHHHHHHHHHHHTTSTTCCCEEEEEEE---------------TTEEEEEEECC
T ss_pred             EEEEcCCCcEEEEEEecCCcch----hHHHHHHHHHHHhhcCCCCCccccccCC---------------CCceEEEEEec
Confidence            3678899999999998765432    3678999999999999887777666431               55789999999


Q ss_pred             CCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEE---cCCCCeEEeeccceeeeccCCCC---
Q 012062           81 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI---DNEGNLKLADFGLARSFSYDHNN---  154 (472)
Q Consensus        81 ~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl---~~~~~vkL~DFG~a~~~~~~~~~---  154 (472)
                      .++|.+++......+++.+++.++.||+.||+|||+++|+||||||+||||   +.++.+||+|||++.........   
T Consensus        88 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~  167 (296)
T 3uzp_A           88 GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI  167 (296)
T ss_dssp             CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBC
T ss_pred             CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccccc
Confidence            878888887555679999999999999999999999999999999999999   47888999999999876543321   


Q ss_pred             ---ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHhcCCCCCCCCccCC
Q 012062          155 ---TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNE---AEQLSKIFELCGSPDETIWPGVS  228 (472)
Q Consensus       155 ---~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~  228 (472)
                         ......+|..|+|||++.+ ..++.++|||||||++|+|++|+.||...+.   ...+..+....            
T Consensus       168 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------------  234 (296)
T 3uzp_A          168 PYRENKNLTGTARYASINTHLG-IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK------------  234 (296)
T ss_dssp             CCCCSCCCCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH------------
T ss_pred             ccccccccccccccCChhhhcC-CCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccc------------
Confidence               2244578999999999987 5689999999999999999999999986432   22222222110            


Q ss_pred             CCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          229 KMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                   ...........++.++.+||++||+.||++|||+.++++
T Consensus       235 -------------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          235 -------------MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             -------------HHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             -------------cCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence                         011122333567889999999999999999999999875


No 177
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=5.5e-40  Score=323.93  Aligned_cols=235  Identities=22%  Similarity=0.313  Sum_probs=178.7

Q ss_pred             CceeccCCCEEEEEEeecCCcC-CCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEK-EGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||+++..... ......+.+|+.++++++|+||+++++++..                .+.+||||||
T Consensus        52 ~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~----------------~~~~~lv~e~  115 (309)
T 2h34_A           52 EAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI----------------DGQLYVDMRL  115 (309)
T ss_dssp             EEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE----------------TTEEEEEEEC
T ss_pred             EEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee----------------CCeEEEEEEe
Confidence            3678889999999999865432 2334677899999999999999999999986                5689999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      +++ +|.+++... ..+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||++.............
T Consensus       116 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  194 (309)
T 2h34_A          116 INGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGN  194 (309)
T ss_dssp             CCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC--------------
T ss_pred             cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccccccc
Confidence            996 676666543 368999999999999999999999999999999999999999999999999997765443344445


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                      ..+|..|+|||++.+ ..++.++|||||||++|+|++|+.||...+.......+.. ....                   
T Consensus       195 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~~-------------------  253 (309)
T 2h34_A          195 TVGTLYYMAPERFSE-SHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQ-AIPR-------------------  253 (309)
T ss_dssp             --CCGGGCCGGGTCC-----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHS-CCCC-------------------
T ss_pred             cCCCcCccCHHHHcC-CCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhcc-CCCC-------------------
Confidence            678999999999876 5788999999999999999999999988766533333321 1100                   


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCC-CHHHHhc
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRI-SAKDALD  280 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~-t~~elL~  280 (472)
                             .......++.++.+||.+||..||++|| |++++++
T Consensus       254 -------~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          254 -------PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             -------GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             -------ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence                   0011234677899999999999999999 8888875


No 178
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=5.7e-40  Score=326.11  Aligned_cols=232  Identities=19%  Similarity=0.248  Sum_probs=184.9

Q ss_pred             ceeccCCCE----EEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEE
Q 012062            2 AREIKTGEI----VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVF   77 (472)
Q Consensus         2 a~~~~tg~~----vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVm   77 (472)
                      |++..+++.    ||+|++..... ......+.+|+.++++++|+||+++++++..                 +.+|+||
T Consensus        32 ~~~~~~~~~~~~kv~~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----------------~~~~~v~   93 (325)
T 3kex_A           32 GVWIPEGESIKIPVCIKVIEDKSG-RQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-----------------SSLQLVT   93 (325)
T ss_dssp             EEECCTTCSCCEEEEEEEECCTTS-CSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-----------------SSEEEEE
T ss_pred             EEEcCCCceEEEEEEEEecccccc-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-----------------CccEEEE
Confidence            667778876    77777654432 2234566789999999999999999999853                 3589999


Q ss_pred             ecCC-CChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC-c
Q 012062           78 EYMD-HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN-T  155 (472)
Q Consensus        78 Ey~~-g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~-~  155 (472)
                      ||+. ++|.+++......+++..++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.+...... .
T Consensus        94 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~  173 (325)
T 3kex_A           94 QYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL  173 (325)
T ss_dssp             ECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC
T ss_pred             EeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCccccccc
Confidence            9998 4787777766567999999999999999999999999999999999999999999999999999876543322 2


Q ss_pred             cccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccc
Q 012062          156 LTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYN  234 (472)
Q Consensus       156 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  234 (472)
                      .....+|..|+|||++.+ ..++.++|||||||++|+|++ |+.||.+.+..+....+.........             
T Consensus       174 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------  239 (325)
T 3kex_A          174 YSEAKTPIKWMALESIHF-GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQP-------------  239 (325)
T ss_dssp             -----CCTTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCC-------------
T ss_pred             ccCCCCcccccChHHhcc-CCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCC-------------
Confidence            334456889999999986 568999999999999999999 99999988877766666432211110             


Q ss_pred             cCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          235 HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                      ..++.++.+||.+||..||++|||+.|++++
T Consensus       240 ----------------~~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          240 ----------------QICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             ----------------TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             ----------------CcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                            1244568899999999999999999999874


No 179
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=1.1e-39  Score=330.70  Aligned_cols=228  Identities=24%  Similarity=0.365  Sum_probs=177.3

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCC-CCh
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD-HDL   84 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~-g~l   84 (472)
                      .++..||||+++.... +.....+.+|+.+|++|+|+||+++++++..                .+.+||||||++ ++|
T Consensus        71 ~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----------------~~~~~lv~e~~~~~sL  133 (373)
T 2qol_A           71 KKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIRLEGVVTK----------------SKPVMIVTEYMENGSL  133 (373)
T ss_dssp             SCBCCEEEEECCTTCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECS----------------SSSCEEEEECCTTCBH
T ss_pred             CCceeEEEEEecCccC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEee----------------CCceEEEEeCCCCCcH
Confidence            5678899999986532 2234578899999999999999999999976                457899999997 478


Q ss_pred             hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccc--ccccc
Q 012062           85 TGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT--NRVIT  162 (472)
Q Consensus        85 ~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~--~~~gt  162 (472)
                      .+++.+....+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++...........  ...+|
T Consensus       134 ~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~  213 (373)
T 2qol_A          134 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIP  213 (373)
T ss_dssp             HHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------------------
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcC
Confidence            8887776667999999999999999999999999999999999999999999999999999876543222211  22346


Q ss_pred             CCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchh
Q 012062          163 LWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRT  241 (472)
Q Consensus       163 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (472)
                      ..|+|||++.+ ..++.++||||||||+|+|++ |+.||...+..+.+..+......+.                     
T Consensus       214 ~~y~aPE~~~~-~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~---------------------  271 (373)
T 2qol_A          214 IRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP---------------------  271 (373)
T ss_dssp             CTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCC---------------------
T ss_pred             CCccChhhhcc-CCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC---------------------
Confidence            78999999986 568999999999999999998 9999999888777766644321111                     


Q ss_pred             hhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          242 MKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                              ...++..+.+||.+||..||++|||+.||++
T Consensus       272 --------~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          272 --------PMDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             --------CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------CccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence                    0135678999999999999999999999985


No 180
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=9e-40  Score=322.54  Aligned_cols=239  Identities=28%  Similarity=0.400  Sum_probs=184.1

Q ss_pred             ceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcC--CCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            2 AREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ--HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~--hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      |++ .+++.||||+++...........+.+|++++++++  |+||+++++++..                ...+|||||+
T Consensus        47 ~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~----------------~~~~~lv~e~  109 (313)
T 3cek_A           47 VLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT----------------DQYIYMVMEC  109 (313)
T ss_dssp             EEC-TTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC----------------SSEEEEEECC
T ss_pred             EEc-CCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec----------------CCEEEEEEec
Confidence            444 35899999999876544445567889999999997  5999999999986                5679999998


Q ss_pred             CCCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC-cccc
Q 012062           80 MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN-TLTN  158 (472)
Q Consensus        80 ~~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~-~~~~  158 (472)
                      ..++|.+++... ..+++.+++.|+.||+.||+|||+++|+||||||+||||++ +.+||+|||+++.+...... ....
T Consensus       110 ~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~  187 (313)
T 3cek_A          110 GNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDS  187 (313)
T ss_dssp             CSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TEEEECCCSSSCC------------
T ss_pred             CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-CeEEEeeccccccccCccccccccC
Confidence            778888887654 36899999999999999999999999999999999999965 78999999999766433221 2234


Q ss_pred             ccccCCCCChhhhcCC----------CCCCCCcchhhHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCCCCCCccC
Q 012062          159 RVITLWYRPPELLLGA----------TKYGPAVDMWSVGCIFAELLNGKPILPGKNE-AEQLSKIFELCGSPDETIWPGV  227 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~----------~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~  227 (472)
                      .++|..|+|||++.+.          ..++.++|||||||++|+|++|+.||..... ...+..+.......   .    
T Consensus       188 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~---~----  260 (313)
T 3cek_A          188 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI---E----  260 (313)
T ss_dssp             --CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCC---C----
T ss_pred             CCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhccccc---C----
Confidence            5689999999998651          3578899999999999999999999987643 33333332211000   0    


Q ss_pred             CCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          228 SKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                                           +....+.++.+||++||..||++|||+.|+|+|+||...
T Consensus       261 ---------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~  299 (313)
T 3cek_A          261 ---------------------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  299 (313)
T ss_dssp             ---------------------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC
T ss_pred             ---------------------CcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCC
Confidence                                 001245689999999999999999999999999999654


No 181
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=5.3e-40  Score=325.76  Aligned_cols=230  Identities=25%  Similarity=0.340  Sum_probs=187.2

Q ss_pred             CceeccCCCEEEEEEeecCCcCC----CchhhHHHHHHHHHhcC--CCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEE
Q 012062            1 MAREIKTGEIVALKKIRMDNEKE----GFPITAIREIKILKKLQ--HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTY   74 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~----~~~~~~~~Ei~il~~l~--hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (472)
                      +|++..+++.||||+++......    .....+.+|+.++++++  |+||+++++++..                .+.++
T Consensus        61 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~----------------~~~~~  124 (320)
T 3a99_A           61 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER----------------PDSFV  124 (320)
T ss_dssp             EEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC----------------SSEEE
T ss_pred             EEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec----------------CCcEE
Confidence            36788999999999998664322    12345678999999996  5999999999986                56799


Q ss_pred             EEEecCC--CChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEc-CCCCeEEeeccceeeeccC
Q 012062           75 MVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYD  151 (472)
Q Consensus        75 iVmEy~~--g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~-~~~~vkL~DFG~a~~~~~~  151 (472)
                      +|||++.  ++|.+++... ..+++.+++.|+.||+.||+|||+++|+||||||+||||+ +++.+||+|||+++.....
T Consensus       125 lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~  203 (320)
T 3a99_A          125 LILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT  203 (320)
T ss_dssp             EEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSS
T ss_pred             EEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccc
Confidence            9999998  4677766543 4689999999999999999999999999999999999999 7789999999999876532


Q ss_pred             CCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCC
Q 012062          152 HNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMP  231 (472)
Q Consensus       152 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  231 (472)
                         ......+|..|+|||++.+...++.++|||||||++|+|++|+.||...+.      +......             
T Consensus       204 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~~~~-------------  261 (320)
T 3a99_A          204 ---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVF-------------  261 (320)
T ss_dssp             ---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHCCCC-------------
T ss_pred             ---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh------hhccccc-------------
Confidence               233456899999999998754457889999999999999999999975421      1111000             


Q ss_pred             ccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          232 AYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                       ....++.++.+||++||..||++|||++||++|+||..
T Consensus       262 -----------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~  299 (320)
T 3a99_A          262 -----------------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD  299 (320)
T ss_dssp             -----------------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred             -----------------ccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcC
Confidence                             01236778999999999999999999999999999954


No 182
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=2e-39  Score=316.61  Aligned_cols=233  Identities=19%  Similarity=0.293  Sum_probs=176.5

Q ss_pred             CCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Chh
Q 012062            7 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLT   85 (472)
Q Consensus         7 tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l~   85 (472)
                      ....||||+++...........+.+|+++|++++|+||++++++..                 ...++|||||+++ +|.
T Consensus        45 ~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----------------~~~~~lv~e~~~~~~L~  107 (289)
T 3og7_A           45 WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-----------------APQLAIVTQWCEGSSLY  107 (289)
T ss_dssp             SSSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----------------SSSCEEEEECCCEEEHH
T ss_pred             EcCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-----------------CCccEEEEEecCCCcHH
Confidence            4456999999876555445567889999999999999999999764                 3357999999985 777


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccC-CCCccccccccCC
Q 012062           86 GLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYD-HNNTLTNRVITLW  164 (472)
Q Consensus        86 ~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~-~~~~~~~~~gt~~  164 (472)
                      +++......+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++..... .........+|..
T Consensus       108 ~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~  187 (289)
T 3og7_A          108 HHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL  187 (289)
T ss_dssp             HHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC------------------CCCT
T ss_pred             HHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccccccccccccccCCCcc
Confidence            777666667999999999999999999999999999999999999999999999999999765432 2223344568999


Q ss_pred             CCChhhhcC--CCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhh
Q 012062          165 YRPPELLLG--ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTM  242 (472)
Q Consensus       165 y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (472)
                      |+|||++..  ...++.++|||||||++|+|++|+.||...+..+.+..+.........     .               
T Consensus       188 y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----~---------------  247 (289)
T 3og7_A          188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPD-----L---------------  247 (289)
T ss_dssp             TCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCC-----T---------------
T ss_pred             ccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcc-----h---------------
Confidence            999999862  245788999999999999999999999987776666655543221111     0               


Q ss_pred             hhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          243 KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       243 ~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                          ......++..+.+||.+||..||++|||+.|+++
T Consensus       248 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          248 ----SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             ----TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----hhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                0011246778999999999999999999999985


No 183
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=4.3e-40  Score=321.89  Aligned_cols=247  Identities=24%  Similarity=0.356  Sum_probs=178.2

Q ss_pred             eccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-
Q 012062            4 EIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-   82 (472)
Q Consensus         4 ~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-   82 (472)
                      +..+++.||||+++....  .....+.+|+++|++++|+||+++++++...+              ...+||||||+++ 
T Consensus        35 ~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--------------~~~~~lv~e~~~~~   98 (295)
T 3ugc_A           35 QDNTGEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAG--------------RRNLKLIMEYLPYG   98 (295)
T ss_dssp             CSSCCEEEEEEEESCCCH--HHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH--------------HTSCEEEEECCTTC
T ss_pred             cCCCCcEEEEEEcccCCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--------------CCceEEEEEeCCCC
Confidence            677999999999975432  23456789999999999999999999986521              3458999999975 


Q ss_pred             ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC--Ccccccc
Q 012062           83 DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN--NTLTNRV  160 (472)
Q Consensus        83 ~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~--~~~~~~~  160 (472)
                      +|.+++......+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.+.....  .......
T Consensus        99 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  178 (295)
T 3ugc_A           99 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGE  178 (295)
T ss_dssp             BHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTT
T ss_pred             CHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCC
Confidence            78777776655699999999999999999999999999999999999999999999999999987643322  1222334


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCch
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSR  240 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (472)
                      +|..|+|||++.+ ..++.++|||||||++|+|++|..||......  +.....   .............        ..
T Consensus       179 ~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~--------~~  244 (295)
T 3ugc_A          179 SPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMIG---NDKQGQMIVFHLI--------EL  244 (295)
T ss_dssp             CGGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH--HHHHHC---TTCCTHHHHHHHH--------HH
T ss_pred             CccceeCcHHhcC-CCCChHHHHHHHHHHHHHHHhcccccCCChHH--HHhhhc---CccccchhHHHHH--------HH
Confidence            6778999999986 56899999999999999999999888653221  111100   0000000000000        00


Q ss_pred             hhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          241 TMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                      ............+++++.+||++||..||++|||+.|+++
T Consensus       245 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            0000000011246788999999999999999999999985


No 184
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=1.1e-39  Score=324.48  Aligned_cols=232  Identities=19%  Similarity=0.279  Sum_probs=180.0

Q ss_pred             ceeccCCCEE----EEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEE
Q 012062            2 AREIKTGEIV----ALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVF   77 (472)
Q Consensus         2 a~~~~tg~~v----AlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVm   77 (472)
                      |++..+++.|    |+|.++... .......+.+|+.++++++|+||+++++++..                 +..++||
T Consensus        34 ~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----------------~~~~~v~   95 (327)
T 3poz_A           34 GLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLT-----------------STVQLIT   95 (327)
T ss_dssp             EEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEES-----------------SSEEEEE
T ss_pred             EEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-----------------CCeEEEE
Confidence            5667777765    777775433 22345678899999999999999999999975                 2368899


Q ss_pred             ecCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC-c
Q 012062           78 EYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN-T  155 (472)
Q Consensus        78 Ey~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~-~  155 (472)
                      ||+.+ +|.+++......+++..++.|+.||+.||+|||+++|+||||||+||||+.++++||+|||+++.+...... .
T Consensus        96 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~  175 (327)
T 3poz_A           96 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH  175 (327)
T ss_dssp             ECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC---
T ss_pred             EecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCccccc
Confidence            99884 777777766667999999999999999999999999999999999999999999999999999876543222 2


Q ss_pred             cccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccc
Q 012062          156 LTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYN  234 (472)
Q Consensus       156 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  234 (472)
                      .....+|..|+|||++.+ ..++.++|||||||++|+|++ |+.||.+.+..+....+......+.              
T Consensus       176 ~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~--------------  240 (327)
T 3poz_A          176 AEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ--------------  240 (327)
T ss_dssp             ----CCCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC--------------
T ss_pred             ccCCCccccccChHHhcc-CCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCC--------------
Confidence            223345789999999987 678999999999999999999 9999998887766555543221111              


Q ss_pred             cCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          235 HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                     ...++..+.+||.+||..||++|||+.|++++
T Consensus       241 ---------------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          241 ---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             ---------------CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             ---------------CccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence                           11356789999999999999999999999864


No 185
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.8e-39  Score=315.02  Aligned_cols=229  Identities=19%  Similarity=0.261  Sum_probs=187.4

Q ss_pred             ccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-C
Q 012062            5 IKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-D   83 (472)
Q Consensus         5 ~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~   83 (472)
                      ..+++.||||+++.... ......+.+|++++++|+|+||+++++++..                 +.+||||||+.+ +
T Consensus        34 ~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----------------~~~~lv~e~~~~~~   95 (287)
T 1u59_A           34 RKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-----------------EALMLVMEMAGGGP   95 (287)
T ss_dssp             --CCEEEEEEEECSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-----------------SSEEEEEECCTTEE
T ss_pred             CCCcceEEEEecCCccc-hhHHHHHHHHHHHHHhCCCCCEeEEEEEecC-----------------CCcEEEEEeCCCCC
Confidence            45788899999986532 2245668899999999999999999999953                 358999999996 7


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC--Cccccccc
Q 012062           84 LTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN--NTLTNRVI  161 (472)
Q Consensus        84 l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~--~~~~~~~g  161 (472)
                      |.+++......+++.+++.++.||+.||.|||+++|+||||||+||||+.++.+||+|||++........  .......+
T Consensus        96 L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  175 (287)
T 1u59_A           96 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW  175 (287)
T ss_dssp             HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCC
T ss_pred             HHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccc
Confidence            7777766666799999999999999999999999999999999999999999999999999987653322  11223345


Q ss_pred             cCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCch
Q 012062          162 TLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSR  240 (472)
Q Consensus       162 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (472)
                      |..|+|||++.+ ..++.++|||||||++|+|++ |+.||...+..+....+.......                     
T Consensus       176 ~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~---------------------  233 (287)
T 1u59_A          176 PLKWYAPECINF-RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME---------------------  233 (287)
T ss_dssp             CGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCC---------------------
T ss_pred             cccccCHHHhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCC---------------------
Confidence            888999999976 568899999999999999998 999999988877776664421100                     


Q ss_pred             hhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          241 TMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                              ....++..+.+||.+||..||++|||+.|++++
T Consensus       234 --------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  266 (287)
T 1u59_A          234 --------CPPECPPELYALMSDCWIYKWEDRPDFLTVEQR  266 (287)
T ss_dssp             --------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             --------CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                    012467789999999999999999999999875


No 186
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=7.6e-40  Score=322.41  Aligned_cols=230  Identities=20%  Similarity=0.328  Sum_probs=186.0

Q ss_pred             ccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-C
Q 012062            5 IKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-D   83 (472)
Q Consensus         5 ~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~   83 (472)
                      ..+++.||||+++.... ......+.+|+++|++|+||||+++++++..                .+.+||||||+.+ +
T Consensus        50 ~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----------------~~~~~lv~e~~~~~~  112 (314)
T 2ivs_A           50 RAGYTTVAVKMLKENAS-PSELRDLLSEFNVLKQVNHPHVIKLYGACSQ----------------DGPLLLIVEYAKYGS  112 (314)
T ss_dssp             CSSEEEEEEEECCTTCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECS----------------SSSCEEEEECCTTCB
T ss_pred             ccCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCCCCceeeEEEEEec----------------CCceEEEEeecCCCC
Confidence            35668999999985432 2234667899999999999999999999976                4568999999984 7


Q ss_pred             hhhhhcCCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEe
Q 012062           84 LTGLADRPG-----------------------LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLA  140 (472)
Q Consensus        84 l~~~~~~~~-----------------------~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~  140 (472)
                      |.+++....                       ..+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+
T Consensus       113 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~  192 (314)
T 2ivs_A          113 LRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKIS  192 (314)
T ss_dssp             HHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEEC
T ss_pred             HHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEc
Confidence            776665422                       248999999999999999999999999999999999999999999999


Q ss_pred             eccceeeeccCCCC-ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCC
Q 012062          141 DFGLARSFSYDHNN-TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGS  218 (472)
Q Consensus       141 DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~  218 (472)
                      |||+++........ ......+|..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+.......+......
T Consensus       193 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~  271 (314)
T 2ivs_A          193 DFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRM  271 (314)
T ss_dssp             CCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC
T ss_pred             cccccccccccccceeccCCCCcccccChhhhcC-CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcC
Confidence            99999876433221 2223355788999999986 568899999999999999999 99999988877766655432111


Q ss_pred             CCCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          219 PDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                      .                             ....++..+.+||.+||..||++|||+.|++++
T Consensus       272 ~-----------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          272 E-----------------------------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             C-----------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             C-----------------------------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            0                             012467789999999999999999999999864


No 187
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=9.8e-40  Score=317.12  Aligned_cols=227  Identities=22%  Similarity=0.282  Sum_probs=181.7

Q ss_pred             CCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Chh
Q 012062            7 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLT   85 (472)
Q Consensus         7 tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l~   85 (472)
                      ++..||||+++..... .....+.+|+.++++++|+||+++++++..                 +..|+||||+.+ +|.
T Consensus        39 ~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----------------~~~~~v~e~~~~~~L~  100 (281)
T 3cc6_A           39 EKINVAVKTCKKDCTL-DNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-----------------EPTWIIMELYPYGELG  100 (281)
T ss_dssp             CEEEEEEEECCTTSCH-HHHHHHHHHHHHHHHHCCTTBCCEEEEECS-----------------SSCEEEEECCTTCBHH
T ss_pred             CcceEEEEecccccCc-hHHHHHHHHHHHHHhCCCCCcceEEEEEcC-----------------CCCEEEEecCCCCCHH
Confidence            4456999999865322 234678899999999999999999999864                 245899999995 777


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccccccCCC
Q 012062           86 GLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWY  165 (472)
Q Consensus        86 ~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y  165 (472)
                      +++.+....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++...............+|..|
T Consensus       101 ~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y  180 (281)
T 3cc6_A          101 HYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKW  180 (281)
T ss_dssp             HHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGG
T ss_pred             HHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcce
Confidence            77766555699999999999999999999999999999999999999999999999999976654333333344568889


Q ss_pred             CChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhhhh
Q 012062          166 RPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKR  244 (472)
Q Consensus       166 ~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (472)
                      +|||++.+ ..++.++|||||||++|+|++ |+.||...+..+....+......+.                        
T Consensus       181 ~aPE~~~~-~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~------------------------  235 (281)
T 3cc6_A          181 MSPESINF-RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPK------------------------  235 (281)
T ss_dssp             CCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCC------------------------
T ss_pred             eCchhhcc-CCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCC------------------------
Confidence            99999976 568899999999999999998 9999988877776666544321111                        


Q ss_pred             hHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          245 RVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       245 ~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                           ...+++.+.+||.+||..||++|||+.|++++
T Consensus       236 -----~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          236 -----PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             -----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----CCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence                 01356789999999999999999999999863


No 188
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=7.2e-40  Score=318.98  Aligned_cols=226  Identities=18%  Similarity=0.268  Sum_probs=179.6

Q ss_pred             ceeccCC-------CEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEE
Q 012062            2 AREIKTG-------EIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTY   74 (472)
Q Consensus         2 a~~~~tg-------~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (472)
                      |++..++       ..||||+++...  ......+.+|++++++++|+||+++++++..                .+.+|
T Consensus        27 ~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----------------~~~~~   88 (289)
T 4fvq_A           27 GVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMSKLSHKHLVLNYGVCVC----------------GDENI   88 (289)
T ss_dssp             EEEEEECGGGCEEEEEEEEEEECGGG--GGGHHHHHHHHHHHHTSCCTTBCCEEEEECC----------------TTCCE
T ss_pred             EEEecccccccccchhhhhhhccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe----------------CCCCE
Confidence            5566666       479999997543  2345678899999999999999999999986                45679


Q ss_pred             EEEecCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCC--------eEEeeccce
Q 012062           75 MVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN--------LKLADFGLA  145 (472)
Q Consensus        75 iVmEy~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~--------vkL~DFG~a  145 (472)
                      |||||+++ +|.+++......+++..++.|+.||+.||+|||+++|+||||||+||||+.++.        +||+|||++
T Consensus        89 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~  168 (289)
T 4fvq_A           89 LVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS  168 (289)
T ss_dssp             EEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSC
T ss_pred             EEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCccc
Confidence            99999985 777777766555999999999999999999999999999999999999998887        999999998


Q ss_pred             eeeccCCCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCC-CCCCCCChHHHHHHHHHhcCCCCCCCC
Q 012062          146 RSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSPDETIW  224 (472)
Q Consensus       146 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~-~pf~~~~~~~~~~~i~~~~~~~~~~~~  224 (472)
                      ....     ......+|..|+|||++.+...++.++|||||||++|+|++|. +||...+..... .+........    
T Consensus       169 ~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~-~~~~~~~~~~----  238 (289)
T 4fvq_A          169 ITVL-----PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL-QFYEDRHQLP----  238 (289)
T ss_dssp             TTTS-----CHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-HHHHTTCCCC----
T ss_pred             cccc-----CccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH-HHhhccCCCC----
Confidence            5432     1223457899999999986566899999999999999999955 555554444433 3332211111    


Q ss_pred             ccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          225 PGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                                ..++.++.+||++||..||++|||+.|++++
T Consensus       239 --------------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          239 --------------------------APKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             --------------------------CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             --------------------------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                                      1134468899999999999999999999975


No 189
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=1.5e-39  Score=341.84  Aligned_cols=230  Identities=20%  Similarity=0.307  Sum_probs=190.2

Q ss_pred             ceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCC
Q 012062            2 AREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD   81 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~   81 (472)
                      |+++.+++.||||+++.+..   ....+++|+.+|++|+|+|||++++++..                ...+|||||||.
T Consensus       239 ~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~----------------~~~~~lv~E~~~  299 (495)
T 1opk_A          239 GVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTR----------------EPPFYIITEFMT  299 (495)
T ss_dssp             EEEGGGTEEEEEEECCSSSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS----------------SSSCEEEEECCT
T ss_pred             EEEcCCCeEEEEEEecCccc---chHHHHHHHHHHHhcCCCCEeeEEEEEec----------------CCcEEEEEEccC
Confidence            67788899999999975432   35678899999999999999999999976                456899999998


Q ss_pred             -CChhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccc
Q 012062           82 -HDLTGLADR-PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR  159 (472)
Q Consensus        82 -g~l~~~~~~-~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~  159 (472)
                       ++|.+++.. ....+++..++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.............
T Consensus       300 ~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~  379 (495)
T 1opk_A          300 YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA  379 (495)
T ss_dssp             TCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTC
T ss_pred             CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCC
Confidence             577777764 334589999999999999999999999999999999999999999999999999987654332233334


Q ss_pred             cccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          160 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       160 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                      .++..|+|||++.. ..++.++||||||||||+|++ |..||.+.+..+.+..+.......                   
T Consensus       380 ~~~~~y~aPE~~~~-~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-------------------  439 (495)
T 1opk_A          380 KFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-------------------  439 (495)
T ss_dssp             CCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC-------------------
T ss_pred             cCCcceeCHhHHhc-CCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-------------------
Confidence            45788999999976 568899999999999999999 999999988776666554321110                   


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                ....++..+.+||.+||..||++|||+.+|++
T Consensus       440 ----------~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          440 ----------RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             ----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence                      01246778999999999999999999999986


No 190
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.7e-39  Score=324.62  Aligned_cols=231  Identities=23%  Similarity=0.367  Sum_probs=184.7

Q ss_pred             ccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-
Q 012062            5 IKTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-   82 (472)
Q Consensus         5 ~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-   82 (472)
                      ..+++.||||+++.... ......+.+|+.+|++| +||||+++++++..                .+.+||||||+++ 
T Consensus        72 ~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~----------------~~~~~lv~e~~~~g  134 (344)
T 1rjb_A           72 TGVSIQVAVKMLKEKAD-SSEREALMSELKMMTQLGSHENIVNLLGACTL----------------SGPIYLIFEYCCYG  134 (344)
T ss_dssp             SSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECS----------------SSSCEEEEECCTTC
T ss_pred             CCcceEEEEEecccccC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee----------------CCccEEEEecCCCC
Confidence            34677899999985432 23456788999999999 89999999999976                4568999999985 


Q ss_pred             ChhhhhcCCCC----------------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEe
Q 012062           83 DLTGLADRPGL----------------------RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLA  140 (472)
Q Consensus        83 ~l~~~~~~~~~----------------------~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~  140 (472)
                      +|.+++.....                      .+++..++.|+.||+.||+|||++||+||||||+||||+.++.+||+
T Consensus       135 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~  214 (344)
T 1rjb_A          135 DLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKIC  214 (344)
T ss_dssp             BHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEEC
T ss_pred             cHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeC
Confidence            78777765432                      37899999999999999999999999999999999999999999999


Q ss_pred             eccceeeeccCCCC-ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCC
Q 012062          141 DFGLARSFSYDHNN-TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGS  218 (472)
Q Consensus       141 DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~  218 (472)
                      |||++..+...... ......+|+.|+|||++.+ ..++.++||||||||+|+|++ |..||.+.+....+..+......
T Consensus       215 Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~  293 (344)
T 1rjb_A          215 DFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFK  293 (344)
T ss_dssp             CCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCC
T ss_pred             CCccCcccccCccceeccCccCccCccCHHHhcc-CCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCC
Confidence            99999866543322 2233456888999999876 568999999999999999998 99999988766665555443211


Q ss_pred             CCCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          219 PDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                      ...                            ...+++++.+||.+||..||.+|||+.||+++
T Consensus       294 ~~~----------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  328 (344)
T 1rjb_A          294 MDQ----------------------------PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  328 (344)
T ss_dssp             CCC----------------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCC----------------------------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            110                            01356789999999999999999999999975


No 191
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=5.9e-40  Score=325.87  Aligned_cols=242  Identities=21%  Similarity=0.326  Sum_probs=168.7

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHH-HHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIK-ILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~-il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|+++.+++.||||+++...... ....+.+|+. +++.++|+||+++++++..                .+.+||||||
T Consensus        40 ~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~~~~~~~h~niv~~~~~~~~----------------~~~~~lv~e~  102 (327)
T 3aln_A           40 KMVHKPSGQIMAVKRIRSTVDEK-EQKQLLMDLDVVMRSSDCPYIVQFYGALFR----------------EGDCWICMEL  102 (327)
T ss_dssp             EEEETTTTEEEEEEEEECCCCHH-HHHHHHHHHHHHHSSCCCTTBCCEEEEEEC----------------SSEEEEEECC
T ss_pred             EEEEcCCCCEEEEEEeecccCch-HHHHHHHHHHHHHHcCCCCcEeeeeeEEEe----------------CCceEEEEee
Confidence            36788899999999998654322 2344556666 7778899999999999986                5678999999


Q ss_pred             CCCChhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC
Q 012062           80 MDHDLTGLADR----PGLRFTVPQIKCYMKQLLTGLHYCHVN-QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN  154 (472)
Q Consensus        80 ~~g~l~~~~~~----~~~~l~~~~i~~i~~Qll~aL~~LH~~-giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~  154 (472)
                      ++++|.+++..    ....+++..+..++.||+.||.|||++ +|+||||||+||||+.++.+||+|||+++.+....  
T Consensus       103 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--  180 (327)
T 3aln_A          103 MSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI--  180 (327)
T ss_dssp             CSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-------
T ss_pred             cCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc--
Confidence            99987766542    345689999999999999999999999 99999999999999999999999999997654322  


Q ss_pred             ccccccccCCCCChhhhc---CCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCC
Q 012062          155 TLTNRVITLWYRPPELLL---GATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMP  231 (472)
Q Consensus       155 ~~~~~~gt~~y~aPE~l~---~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  231 (472)
                      ......+|..|+|||++.   ....++.++|||||||++|+|++|+.||...+...  ..+........    +   .++
T Consensus       181 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~----~---~~~  251 (327)
T 3aln_A          181 AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF--DQLTQVVKGDP----P---QLS  251 (327)
T ss_dssp             -------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------CCCCCSCC----C---CCC
T ss_pred             ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH--HHHHHHhcCCC----C---CCC
Confidence            223346899999999984   22458899999999999999999999998654321  11111000000    0   000


Q ss_pred             ccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCC
Q 012062          232 AYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFW  285 (472)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~  285 (472)
                      .               .....++..+.+||++||..||++|||+.|||+|+||.
T Consensus       252 ~---------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~  290 (327)
T 3aln_A          252 N---------------SEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFIL  290 (327)
T ss_dssp             C---------------CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             C---------------cccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHH
Confidence            0               01124677899999999999999999999999999994


No 192
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=3.3e-39  Score=311.32  Aligned_cols=226  Identities=25%  Similarity=0.355  Sum_probs=173.3

Q ss_pred             cCCCEEEEEEeecCCcC--CCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-
Q 012062            6 KTGEIVALKKIRMDNEK--EGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-   82 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-   82 (472)
                      .+++.||||+++.....  ......+.+|+++++.++|+||+++++++..                .+.+||||||+++ 
T Consensus        28 ~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~~~~   91 (271)
T 3dtc_A           28 WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK----------------EPNLCLVMEFARGG   91 (271)
T ss_dssp             ETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC----------------C--CEEEEECCTTE
T ss_pred             EcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec----------------CCceEEEEEcCCCC
Confidence            35889999999865322  2345678899999999999999999999976                4568999999986 


Q ss_pred             ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCCCcEEEcC--------CCCeEEeeccceeeeccC
Q 012062           83 DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ---VLHRDIKGSNLLIDN--------EGNLKLADFGLARSFSYD  151 (472)
Q Consensus        83 ~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~g---iiHrDLKp~NILl~~--------~~~vkL~DFG~a~~~~~~  151 (472)
                      +|.+++..  ..+++.+++.++.||+.||+|||+++   |+||||||+||||+.        ++.+||+|||++..+...
T Consensus        92 ~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~  169 (271)
T 3dtc_A           92 PLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT  169 (271)
T ss_dssp             EHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------
T ss_pred             CHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccc
Confidence            55555533  36999999999999999999999999   899999999999986        677999999999765432


Q ss_pred             CCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCC
Q 012062          152 HNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMP  231 (472)
Q Consensus       152 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  231 (472)
                      .   .....+|..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.......+........           
T Consensus       170 ~---~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------  234 (271)
T 3dtc_A          170 T---KMSAAGAYAWMAPEVIRA-SMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALP-----------  234 (271)
T ss_dssp             ---------CCGGGSCHHHHHH-CCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCC-----------
T ss_pred             c---ccCCCCccceeCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCC-----------
Confidence            2   224568999999999986 5689999999999999999999999999888776666543211110           


Q ss_pred             ccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          232 AYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                       ....+++.+.+||.+||..||++|||+.|++++
T Consensus       235 -----------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          235 -----------------IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             -----------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------------CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence                             012467789999999999999999999999864


No 193
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.7e-39  Score=320.77  Aligned_cols=225  Identities=22%  Similarity=0.362  Sum_probs=179.1

Q ss_pred             CEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Chhhh
Q 012062            9 EIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGL   87 (472)
Q Consensus         9 ~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l~~~   87 (472)
                      ..||||+++.... ......+.+|++++++++|+||+++++++..                .+.+||||||+++ +|.++
T Consensus        74 ~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----------------~~~~~lv~e~~~~~~L~~~  136 (333)
T 1mqb_A           74 VPVAIKTLKAGYT-EKQRVDFLGEAGIMGQFSHHNIIRLEGVISK----------------YKPMMIITEYMENGALDKF  136 (333)
T ss_dssp             EEEEEEEECTTCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECS----------------SSSEEEEEECCTTEEHHHH
T ss_pred             ccEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEec----------------CCCcEEEEeCCCCCcHHHH
Confidence            4599999975532 2234567899999999999999999999976                5578999999986 77777


Q ss_pred             hcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCc--cccccccCCC
Q 012062           88 ADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWY  165 (472)
Q Consensus        88 ~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~--~~~~~gt~~y  165 (472)
                      +......+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.........  .....+|..|
T Consensus       137 l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y  216 (333)
T 1mqb_A          137 LREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW  216 (333)
T ss_dssp             HHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGG
T ss_pred             HHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccc
Confidence            76665679999999999999999999999999999999999999999999999999998765432211  1223457789


Q ss_pred             CChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhhhh
Q 012062          166 RPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKR  244 (472)
Q Consensus       166 ~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (472)
                      +|||++.+ ..++.++|||||||++|+|++ |+.||...+..+.+..+......+.                        
T Consensus       217 ~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~------------------------  271 (333)
T 1mqb_A          217 TAPEAISY-RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPT------------------------  271 (333)
T ss_dssp             SCHHHHHS-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC------------------------
T ss_pred             cCchhccc-CCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCC------------------------
Confidence            99999976 568899999999999999998 9999999888777776654321110                        


Q ss_pred             hHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          245 RVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       245 ~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                           ...++..+.+||.+||..||++|||+.|+++
T Consensus       272 -----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  302 (333)
T 1mqb_A          272 -----PMDCPSAIYQLMMQCWQQERARRPKFADIVS  302 (333)
T ss_dssp             -----CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             -----cccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                 0136778999999999999999999999985


No 194
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=2.1e-39  Score=319.16  Aligned_cols=232  Identities=23%  Similarity=0.339  Sum_probs=187.8

Q ss_pred             eccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC
Q 012062            4 EIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH   82 (472)
Q Consensus         4 ~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g   82 (472)
                      +..+++.||||+++..... .....+.+|+++|++| +|+||+++++++..                .+.+||||||+++
T Consensus        49 ~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~----------------~~~~~lv~e~~~~  111 (313)
T 1t46_A           49 KSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHMNIVNLLGACTI----------------GGPTLVITEYCCY  111 (313)
T ss_dssp             STTCEEEEEEEEECTTCCH-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----------------SSSCEEEEECCTT
T ss_pred             ccchhhhhHHHhcCcchhH-HHHHHHHHHHHHHhhcccCCCeeeEEEEEec----------------CCCcEEEEecCCC
Confidence            4568899999999855322 2346788999999999 89999999999976                4567999999986


Q ss_pred             -ChhhhhcCCCC-----------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccc
Q 012062           83 -DLTGLADRPGL-----------------RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGL  144 (472)
Q Consensus        83 -~l~~~~~~~~~-----------------~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~  144 (472)
                       +|.+++.....                 .+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||+
T Consensus       112 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~  191 (313)
T 1t46_A          112 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGL  191 (313)
T ss_dssp             EEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGG
T ss_pred             CCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEccccc
Confidence             77777654322                 489999999999999999999999999999999999999999999999999


Q ss_pred             eeeeccCCCC-ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCC
Q 012062          145 ARSFSYDHNN-TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDET  222 (472)
Q Consensus       145 a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~  222 (472)
                      +......... ......+|..|+|||++.+ ..++.++|||||||++|+|++ |+.||.+.+....+..+......... 
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~-  269 (313)
T 1t46_A          192 ARDIKNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS-  269 (313)
T ss_dssp             GSCTTSCTTSEECSSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCC-
T ss_pred             cccccccccceeccCCCCcceeeChHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCC-
Confidence            9776543322 1223456788999999876 578999999999999999998 99999988766655555443211110 


Q ss_pred             CCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          223 IWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                                 ...++..+.+||.+||..||++|||+.|++++
T Consensus       270 ---------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          270 ---------------------------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             ---------------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------------------------cccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence                                       02356789999999999999999999999863


No 195
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=6.5e-40  Score=327.53  Aligned_cols=242  Identities=22%  Similarity=0.341  Sum_probs=162.8

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHH-HHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIK-ILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~-il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||++....       ...+|+. .++.+.|+||+++++++.....            ....+||||||
T Consensus        47 ~~~~~~~~~~vavK~~~~~~-------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~------------~~~~~~lv~e~  107 (336)
T 3fhr_A           47 ECFHRRTGQKCALKLLYDSP-------KARQEVDHHWQASGGPHIVCILDVYENMHH------------GKRCLLIIMEC  107 (336)
T ss_dssp             EEEETTTCCEEEEEEEESSH-------HHHHHHHHHHHHTTSTTBCCEEEEEEEEET------------TEEEEEEEEEC
T ss_pred             EEEECCCCCEEEEEEecCcH-------HHHHHHHHHHHhcCCCChHHHHHHHhhccC------------CCceEEEEEec
Confidence            47888999999999997431       2333443 4677799999999999975211            13468999999


Q ss_pred             CCC-ChhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCC---CCeEEeeccceeeeccCCCC
Q 012062           80 MDH-DLTGLADRPG-LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE---GNLKLADFGLARSFSYDHNN  154 (472)
Q Consensus        80 ~~g-~l~~~~~~~~-~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~---~~vkL~DFG~a~~~~~~~~~  154 (472)
                      |++ +|.+++.+.. ..+++.+++.|+.||+.||+|||+++|+||||||+||||+.+   +.+||+|||+++.....   
T Consensus       108 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~---  184 (336)
T 3fhr_A          108 MEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN---  184 (336)
T ss_dssp             CTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC------
T ss_pred             cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceecccc---
Confidence            986 7877776543 469999999999999999999999999999999999999864   45999999999765432   


Q ss_pred             ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccc
Q 012062          155 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYN  234 (472)
Q Consensus       155 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  234 (472)
                      .....++|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+.......+.........       ..    
T Consensus       185 ~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------~~----  252 (336)
T 3fhr_A          185 ALQTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY-------GF----  252 (336)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------CC----
T ss_pred             ccccCCCCcCccChhhhCC-CCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcccc-------cc----
Confidence            2334567999999999865 56788999999999999999999999876654432222111000000       00    


Q ss_pred             cCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          235 HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                                 ....+..++.++++||++||..||++|||+.|+|+|+||...
T Consensus       253 -----------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          253 -----------PNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             -----------CTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             -----------CchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence                       001123578899999999999999999999999999999653


No 196
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.1e-39  Score=321.68  Aligned_cols=230  Identities=25%  Similarity=0.364  Sum_probs=181.2

Q ss_pred             CceeccCCCEEEEEEeecCCcCC----CchhhHHHHHHHHHhc----CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCe
Q 012062            1 MAREIKTGEIVALKKIRMDNEKE----GFPITAIREIKILKKL----QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGS   72 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~----~~~~~~~~Ei~il~~l----~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (472)
                      +|++..+++.||||+++......    .....+.+|+.+++++    +|+||+++++++..                .+.
T Consensus        49 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~----------------~~~  112 (312)
T 2iwi_A           49 AGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET----------------QEG  112 (312)
T ss_dssp             EEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC---------------------
T ss_pred             EEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec----------------CCe
Confidence            36788899999999997653321    1233456799999999    89999999999976                456


Q ss_pred             EEEEEec-CC-CChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEc-CCCCeEEeeccceeeec
Q 012062           73 TYMVFEY-MD-HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFS  149 (472)
Q Consensus        73 ~~iVmEy-~~-g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~-~~~~vkL~DFG~a~~~~  149 (472)
                      +|+|||+ +. ++|.+++.+. ..+++.+++.++.||+.||+|||+++|+||||||+||||+ .++.+||+|||++....
T Consensus       113 ~~~v~e~~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~  191 (312)
T 2iwi_A          113 FMLVLERPLPAQDLFDYITEK-GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH  191 (312)
T ss_dssp             CEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECC
T ss_pred             EEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcc
Confidence            8999999 55 4777766543 3689999999999999999999999999999999999999 78899999999998765


Q ss_pred             cCCCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCC
Q 012062          150 YDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK  229 (472)
Q Consensus       150 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  229 (472)
                      ..   ......+|..|+|||++.+....+.++|||||||++|+|++|+.||.....      +......           
T Consensus       192 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~-----------  251 (312)
T 2iwi_A          192 DE---PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELH-----------  251 (312)
T ss_dssp             SS---CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHTCCC-----------
T ss_pred             cC---cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------HhhhccC-----------
Confidence            32   234456899999999987644445689999999999999999999975321      1111000           


Q ss_pred             CCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          230 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                         +...++..+++||.+||..||++|||+.|+|+|+||..
T Consensus       252 -------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~  289 (312)
T 2iwi_A          252 -------------------FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT  289 (312)
T ss_dssp             -------------------CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC
T ss_pred             -------------------CcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcC
Confidence                               01246778999999999999999999999999999964


No 197
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=8.2e-40  Score=324.93  Aligned_cols=239  Identities=23%  Similarity=0.362  Sum_probs=168.1

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcC-CCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ-HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||++.....  .....+.+|+.+++++. |+||+++++++.......        ......+||||||
T Consensus        46 ~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~--------~~~~~~~~lv~e~  115 (337)
T 3ll6_A           46 EAQDVGSGREYALKRLLSNEE--EKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES--------DTGQAEFLLLTEL  115 (337)
T ss_dssp             EEEETTTCCEEEEEEEEESSH--HHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTS--------TTSSEEEEEEEEC
T ss_pred             EEEECCCCcEEEEEEecCCch--HHHHHHHHHHHHHHHhccCCChhhcccccccccccc--------ccCCceEEEEEEe
Confidence            467888999999999865432  23456789999999996 999999999996532211        1225578999999


Q ss_pred             CCCChhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC-
Q 012062           80 MDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYCHVNQ--VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN-  154 (472)
Q Consensus        80 ~~g~l~~~~~~--~~~~l~~~~i~~i~~Qll~aL~~LH~~g--iiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~-  154 (472)
                      ++++|.+++..  ....+++.+++.|+.||+.||+|||+++  |+||||||+||||+.++.+||+|||+++........ 
T Consensus       116 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~  195 (337)
T 3ll6_A          116 CKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYS  195 (337)
T ss_dssp             CSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC---
T ss_pred             cCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCccc
Confidence            99998887754  3456999999999999999999999999  999999999999999999999999999876432221 


Q ss_pred             ----------ccccccccCCCCChhhhc--CCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCC
Q 012062          155 ----------TLTNRVITLWYRPPELLL--GATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDET  222 (472)
Q Consensus       155 ----------~~~~~~gt~~y~aPE~l~--~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~  222 (472)
                                .....++|+.|+|||++.  ....++.++||||||||+|+|++|+.||........+......   +.  
T Consensus       196 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~--  270 (337)
T 3ll6_A          196 WSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSI---PP--  270 (337)
T ss_dssp             ----------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------CCC---CT--
T ss_pred             ccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcCcccC---Cc--
Confidence                      112346799999999983  2356788999999999999999999999765544332221100   00  


Q ss_pred             CCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          223 IWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                                 ....+..+.+||++||..||++|||+.|++++
T Consensus       271 ---------------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  302 (337)
T 3ll6_A          271 ---------------------------HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ  302 (337)
T ss_dssp             ---------------------------TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             ---------------------------ccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                                       01234458899999999999999999999975


No 198
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=2.6e-39  Score=317.03  Aligned_cols=242  Identities=25%  Similarity=0.404  Sum_probs=180.6

Q ss_pred             eccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-
Q 012062            4 EIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-   82 (472)
Q Consensus         4 ~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-   82 (472)
                      +..+++.||||+++..... .....+.+|+++|++++|+||+++++++...+              ...+||||||+++ 
T Consensus        46 ~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--------------~~~~~lv~e~~~~~  110 (302)
T 4e5w_A           46 GDNTGEQVAVKSLKPESGG-NHIADLKKEIEILRNLYHENIVKYKGICTEDG--------------GNGIKLIMEFLPSG  110 (302)
T ss_dssp             SSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----------------CCEEEEEECCTTC
T ss_pred             cCccCeEEEEEEecccccc-hhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC--------------CceEEEEEEeCCCC
Confidence            6789999999999865432 34567889999999999999999999998632              3568999999986 


Q ss_pred             ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC--Ccccccc
Q 012062           83 DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN--NTLTNRV  160 (472)
Q Consensus        83 ~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~--~~~~~~~  160 (472)
                      +|.+++......+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||++..+.....  .......
T Consensus       111 ~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  190 (302)
T 4e5w_A          111 SLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRD  190 (302)
T ss_dssp             BHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTT
T ss_pred             cHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCC
Confidence            77777755556799999999999999999999999999999999999999999999999999987654332  2233456


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCch
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSR  240 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (472)
                      +|..|+|||++.+ ..++.++|||||||++|+|++|..||....  ..+...   ........ .             ..
T Consensus       191 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~---~~~~~~~~-~-------------~~  250 (302)
T 4e5w_A          191 SPVFWYAPECLMQ-SKFYIASDVWSFGVTLHELLTYCDSDSSPM--ALFLKM---IGPTHGQM-T-------------VT  250 (302)
T ss_dssp             CCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHH--HHHHHH---HCSCCGGG-H-------------HH
T ss_pred             CCccccCCeeecC-CCCCcchhHHHHHHHHHHHHHccCCCcchh--hHHhhc---cCCccccc-C-------------HH
Confidence            7888999999976 567889999999999999999988754221  111111   00000000 0             00


Q ss_pred             hhhhh-----HHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          241 TMKRR-----VREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       241 ~~~~~-----~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                      .....     .......+++.+.+||++||..||++|||+.|+++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          251 RLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            00000     00011356789999999999999999999999985


No 199
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=2e-39  Score=321.35  Aligned_cols=239  Identities=23%  Similarity=0.283  Sum_probs=182.3

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Ch
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DL   84 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l   84 (472)
                      .+++.||||++.....  .....+.+|+++++.++|+||+++++++..                .+.+||||||+++ +|
T Consensus        61 ~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----------------~~~~~lv~e~~~~~~L  122 (321)
T 2qkw_B           61 RDGAKVALKRRTPESS--QGIEEFETEIETLSFCRHPHLVSLIGFCDE----------------RNEMILIYKYMENGNL  122 (321)
T ss_dssp             TTCCEEEEEECCSCCS--SHHHHHHHHHHGGGSCCCTTBCCEEEECCC----------------TTCCEEEEECCTTCBT
T ss_pred             CCCCEEEEEEecccCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEcC----------------CCeEEEEEEcCCCCcH
Confidence            4789999999875432  235678899999999999999999999876                5578999999985 67


Q ss_pred             hhhhcCCC---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC-Ccccccc
Q 012062           85 TGLADRPG---LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN-NTLTNRV  160 (472)
Q Consensus        85 ~~~~~~~~---~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~-~~~~~~~  160 (472)
                      .+++....   ..+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||+++....... .......
T Consensus       123 ~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  202 (321)
T 2qkw_B          123 KRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVK  202 (321)
T ss_dssp             GGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCE
T ss_pred             HHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccccC
Confidence            66665432   3589999999999999999999999999999999999999999999999999986543222 2233456


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHH---HH--hcCCCCCCCCccCCCCCcccc
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI---FE--LCGSPDETIWPGVSKMPAYNH  235 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i---~~--~~~~~~~~~~~~~~~~~~~~~  235 (472)
                      +|..|+|||++.+ ..++.++|||||||++|+|++|+.||......+....+   ..  ..........+..        
T Consensus       203 gt~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  273 (321)
T 2qkw_B          203 GTLGYIDPEYFIK-GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL--------  273 (321)
T ss_dssp             EETTTCCHHHHHH-CBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSC--------
T ss_pred             CCccccCHHHhcC-CCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhh--------
Confidence            8999999999976 56899999999999999999999999865432211111   00  0000000000000        


Q ss_pred             CCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          236 FKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                .......++..+.+||.+||..||++|||+.|++++
T Consensus       274 ----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          274 ----------ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             ----------TTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------ccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                      001112456789999999999999999999999864


No 200
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=1e-38  Score=333.70  Aligned_cols=234  Identities=20%  Similarity=0.257  Sum_probs=187.5

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeE-EeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKE-IVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||+++.....    ..+.+|+++++.|+|.+++..+. ++..                ....||||||
T Consensus        25 ~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~~~----------------~~~~~lvme~   84 (483)
T 3sv0_A           25 LGTNIQTNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFGVE----------------GDYNVLVMDL   84 (483)
T ss_dssp             EEEETTTCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEEEE----------------TTEEEEEEEC
T ss_pred             EEEECCCCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEEee----------------CCEEEEEEEC
Confidence            4678899999999998765433    35789999999998765554444 4433                5578999999


Q ss_pred             CCCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEE---cCCCCeEEeeccceeeeccCCCC--
Q 012062           80 MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI---DNEGNLKLADFGLARSFSYDHNN--  154 (472)
Q Consensus        80 ~~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl---~~~~~vkL~DFG~a~~~~~~~~~--  154 (472)
                      +.++|.+++......+++.+++.|+.||+.||+|||+++|+||||||+||||   +.++.+||+|||+++.+......  
T Consensus        85 ~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~  164 (483)
T 3sv0_A           85 LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQH  164 (483)
T ss_dssp             CCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB
T ss_pred             CCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccc
Confidence            9888988887666679999999999999999999999999999999999999   68889999999999877643321  


Q ss_pred             ----ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChH---HHHHHHHHhcCCCCCCCCccC
Q 012062          155 ----TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEA---EQLSKIFELCGSPDETIWPGV  227 (472)
Q Consensus       155 ----~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~  227 (472)
                          .....++|..|+|||++.+ ..++.++||||||||||+|++|+.||.+....   +.+.++...            
T Consensus       165 ~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~------------  231 (483)
T 3sv0_A          165 IPYRENKNLTGTARYASVNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK------------  231 (483)
T ss_dssp             CCCCCCCCCCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHH------------
T ss_pred             cccccccccCCCccccCHHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhc------------
Confidence                1235678999999999987 56899999999999999999999999875543   333333221            


Q ss_pred             CCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          228 SKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                   ........+...++.++.+||.+||..||++||++.+|++
T Consensus       232 -------------~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          232 -------------KVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             -------------HHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             -------------cccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                         0112233445678899999999999999999999998864


No 201
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=2.8e-39  Score=315.74  Aligned_cols=230  Identities=19%  Similarity=0.263  Sum_probs=183.9

Q ss_pred             eeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC
Q 012062            3 REIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH   82 (472)
Q Consensus         3 ~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g   82 (472)
                      ++..+++.||||+++...........+.+|+++++.++|+||+++++++.                 .+.+||||||+.+
T Consensus        39 ~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----------------~~~~~lv~e~~~~  101 (291)
T 1xbb_A           39 QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-----------------AESWMLVMEMAEL  101 (291)
T ss_dssp             ECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----------------SSSEEEEEECCTT
T ss_pred             cCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC-----------------CCCcEEEEEeCCC
Confidence            34567889999999876544445667889999999999999999999994                 3468999999985


Q ss_pred             -ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCc--cccc
Q 012062           83 -DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNT--LTNR  159 (472)
Q Consensus        83 -~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~--~~~~  159 (472)
                       +|.+++... ..+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||++..........  ....
T Consensus       102 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  180 (291)
T 1xbb_A          102 GPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG  180 (291)
T ss_dssp             EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----
T ss_pred             CCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccC
Confidence             666666543 469999999999999999999999999999999999999999999999999998765433211  1223


Q ss_pred             cccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          160 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       160 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                      .+|..|+|||++.+ ..++.++|||||||++|+|++ |+.||...+..+....+.......                   
T Consensus       181 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------  240 (291)
T 1xbb_A          181 KWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG-------------------  240 (291)
T ss_dssp             CCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC-------------------
T ss_pred             CCCceeeChHHhcc-CCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC-------------------
Confidence            45688999999976 467889999999999999999 999999988877666654321100                   


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                ....++..+.+||.+||..||++|||+.|+++
T Consensus       241 ----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          241 ----------CPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             ----------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                      01246778999999999999999999999985


No 202
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=4.2e-39  Score=319.84  Aligned_cols=232  Identities=25%  Similarity=0.336  Sum_probs=184.9

Q ss_pred             CceeccCCCEE--EEEEeecCCcCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEE
Q 012062            1 MAREIKTGEIV--ALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVF   77 (472)
Q Consensus         1 La~~~~tg~~v--AlK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVm   77 (472)
                      +|++..+++.+  |||+++..... .....+.+|+++|+++ +|+||+++++++..                .+.+||||
T Consensus        43 ~~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~----------------~~~~~lv~  105 (327)
T 1fvr_A           43 KARIKKDGLRMDAAIKRMKEYASK-DDHRDFAGELEVLCKLGHHPNIINLLGACEH----------------RGYLYLAI  105 (327)
T ss_dssp             EEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEE----------------TTEEEEEE
T ss_pred             EEEEccCCcccceeeeeeccccch-HHHHHHHHHHHHHHhccCCCchhhhceeeee----------------CCceEEEE
Confidence            36778888865  99998754322 2455788999999999 89999999999986                56899999


Q ss_pred             ecCCC-ChhhhhcCCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEee
Q 012062           78 EYMDH-DLTGLADRPG---------------LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLAD  141 (472)
Q Consensus        78 Ey~~g-~l~~~~~~~~---------------~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~D  141 (472)
                      ||+++ +|.+++....               ..+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|
T Consensus       106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~D  185 (327)
T 1fvr_A          106 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIAD  185 (327)
T ss_dssp             CCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECC
T ss_pred             ecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcc
Confidence            99975 7777776543               3689999999999999999999999999999999999999999999999


Q ss_pred             ccceeeeccCCCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCC
Q 012062          142 FGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPD  220 (472)
Q Consensus       142 FG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~  220 (472)
                      ||+++.....  .......++..|+|||++.+ ..++.++||||||||+|+|++ |..||.+.+..+....+....... 
T Consensus       186 fg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~-  261 (327)
T 1fvr_A          186 FGLSRGQEVY--VKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLE-  261 (327)
T ss_dssp             TTCEESSCEE--CCC----CCTTTCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCC-
T ss_pred             cCcCcccccc--ccccCCCCCccccChhhhcc-ccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCCC-
Confidence            9998743221  12223355889999999876 567899999999999999998 999999988877666553321100 


Q ss_pred             CCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          221 ETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                                  ....++..+.+||.+||..||++|||+.|++++
T Consensus       262 ----------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          262 ----------------------------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             ----------------------------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------------------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                                        011467789999999999999999999999864


No 203
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=4.2e-39  Score=320.40  Aligned_cols=232  Identities=19%  Similarity=0.277  Sum_probs=181.1

Q ss_pred             CceeccCCCEE----EEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEE
Q 012062            1 MAREIKTGEIV----ALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMV   76 (472)
Q Consensus         1 La~~~~tg~~v----AlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iV   76 (472)
                      +|++..+++.|    |+|.++... .......+.+|+.++++++|+||+++++++..                 +..++|
T Consensus        33 ~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----------------~~~~~v   94 (327)
T 3lzb_A           33 KGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLT-----------------STVQLI   94 (327)
T ss_dssp             EEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES-----------------SSEEEE
T ss_pred             EEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec-----------------CCceEE
Confidence            36677788766    556554332 23356678899999999999999999999975                 237889


Q ss_pred             EecCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC-C
Q 012062           77 FEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN-N  154 (472)
Q Consensus        77 mEy~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~-~  154 (472)
                      |||+.+ +|.+++......+++..++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.+..... .
T Consensus        95 ~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~  174 (327)
T 3lzb_A           95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY  174 (327)
T ss_dssp             ECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-----------
T ss_pred             EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccc
Confidence            999885 77777776666799999999999999999999999999999999999999999999999999987643322 1


Q ss_pred             ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCcc
Q 012062          155 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY  233 (472)
Q Consensus       155 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  233 (472)
                      ......+|..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+....+......+.             
T Consensus       175 ~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------  240 (327)
T 3lzb_A          175 HAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ-------------  240 (327)
T ss_dssp             -----CCCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC-------------
T ss_pred             cccCCCccccccCHHHHcC-CCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC-------------
Confidence            2223345788999999986 678999999999999999999 9999998887776665543221111             


Q ss_pred             ccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          234 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                      ...++.++.+||++||..||++|||+.|+++
T Consensus       241 ----------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          241 ----------------PPICTIDVYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             ----------------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------------CccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                            1236678999999999999999999999986


No 204
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=7.9e-39  Score=318.98  Aligned_cols=229  Identities=25%  Similarity=0.389  Sum_probs=184.5

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-C
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-D   83 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~   83 (472)
                      .+++.||||+++.... ......+.+|+++++++ +|+||+++++++..                .+.+||||||+++ +
T Consensus        65 ~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~----------------~~~~~lv~e~~~~~~  127 (334)
T 2pvf_A           65 KEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ----------------DGPLYVIVEYASKGN  127 (334)
T ss_dssp             ---CEEEEEECCTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----------------SSCCEEEEECCTTCB
T ss_pred             ccceEEEEeeeccCCc-HHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc----------------CCceEEEEECCCCCc
Confidence            5778999999985532 22345678999999999 89999999999976                5578999999986 7


Q ss_pred             hhhhhcCCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeee
Q 012062           84 LTGLADRPG---------------LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF  148 (472)
Q Consensus        84 l~~~~~~~~---------------~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~  148 (472)
                      |.+++....               ..+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||+++..
T Consensus       128 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~  207 (334)
T 2pvf_A          128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI  207 (334)
T ss_dssp             HHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             HHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEccccccccc
Confidence            777766532               24899999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCC-CccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCcc
Q 012062          149 SYDHN-NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPG  226 (472)
Q Consensus       149 ~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  226 (472)
                      ..... .......+|..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+.+..+........      
T Consensus       208 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~------  280 (334)
T 2pvf_A          208 NNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK------  280 (334)
T ss_dssp             TTTSSEECCSCCCCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCC------
T ss_pred             cccccccccCCCCcccceeChHHhcC-CCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCC------
Confidence            54322 12223355788999999976 568899999999999999999 9999999888777766654321110      


Q ss_pred             CCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          227 VSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                             ...++..+.+||.+||..||++|||+.|++++
T Consensus       281 -----------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          281 -----------------------PANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             -----------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------------------CccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                                   11366789999999999999999999999863


No 205
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=7.3e-39  Score=308.23  Aligned_cols=226  Identities=16%  Similarity=0.206  Sum_probs=185.4

Q ss_pred             CCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Chh
Q 012062            7 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLT   85 (472)
Q Consensus         7 tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l~   85 (472)
                      +++.||||+++...........+.+|+.++++++|+||+++++++....              .+.+||||||+++ +|.
T Consensus        32 ~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--------------~~~~~lv~e~~~~~~L~   97 (271)
T 3kmu_A           32 QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP--------------APHPTLITHWMPYGSLY   97 (271)
T ss_dssp             TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTT--------------SSSCEEEEECCTTCBHH
T ss_pred             CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCC--------------CCCeEeeecccCCCcHH
Confidence            5889999999876544445567889999999999999999999997632              3578999999985 787


Q ss_pred             hhhcCCCC-CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccccccc
Q 012062           86 GLADRPGL-RFTVPQIKCYMKQLLTGLHYCHVNQ--VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVIT  162 (472)
Q Consensus        86 ~~~~~~~~-~l~~~~i~~i~~Qll~aL~~LH~~g--iiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt  162 (472)
                      +++..... .+++.+++.|+.||+.||+|||+++  |+||||||+|||++.++.++|+||+++....      .....+|
T Consensus        98 ~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~------~~~~~~t  171 (271)
T 3kmu_A           98 NVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ------SPGRMYA  171 (271)
T ss_dssp             HHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS------CTTCBSC
T ss_pred             HHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec------ccCccCC
Confidence            77766433 5899999999999999999999999  9999999999999999999999999875422      2335679


Q ss_pred             CCCCChhhhcCCCC--CCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCch
Q 012062          163 LWYRPPELLLGATK--YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSR  240 (472)
Q Consensus       163 ~~y~aPE~l~~~~~--~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (472)
                      +.|+|||++.+...  ++.++|||||||++|+|++|+.||...+..+....+......+.                    
T Consensus       172 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------  231 (271)
T 3kmu_A          172 PAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPT--------------------  231 (271)
T ss_dssp             GGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCC--------------------
T ss_pred             ccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCC--------------------
Confidence            99999999986322  23379999999999999999999999888887766654322111                    


Q ss_pred             hhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          241 TMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                              ....++.++.+||.+||..||++|||+.|+++
T Consensus       232 --------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          232 --------IPPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                    01246778999999999999999999999985


No 206
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.1e-39  Score=333.15  Aligned_cols=257  Identities=23%  Similarity=0.331  Sum_probs=189.8

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++...... ....+.+|+++|++++|+||+++++++....              ...+|||||||
T Consensus        27 ~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--------------~~~~~lv~e~~   91 (396)
T 4eut_A           27 RGRHKKTGDLFAIKVFNNISFLR-PVDVQMREFEVLKKLNHKNIVKLFAIEEETT--------------TRHKVLIMEFC   91 (396)
T ss_dssp             EEEETTTCCEEEEEEECGGGGGS-CHHHHHHHHHHHHHCCCTTBCCEEEEEECTT--------------TCCEEEEECCC
T ss_pred             EEEECCCCcEEEEEEeccccccc-hHHHHHHHHHHHHhcCCCCCCeEEEeeccCC--------------CCeeEEEEecC
Confidence            47889999999999998654322 3456789999999999999999999998632              34789999999


Q ss_pred             CC-ChhhhhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEE----cCCCCeEEeeccceeeeccCCC
Q 012062           81 DH-DLTGLADRPG--LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI----DNEGNLKLADFGLARSFSYDHN  153 (472)
Q Consensus        81 ~g-~l~~~~~~~~--~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl----~~~~~vkL~DFG~a~~~~~~~~  153 (472)
                      ++ +|.+++....  ..+++.+++.|+.||+.||+|||+++|+||||||+||||    +.++.+||+|||+++...... 
T Consensus        92 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~-  170 (396)
T 4eut_A           92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE-  170 (396)
T ss_dssp             TTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGG-
T ss_pred             CCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCC-
Confidence            85 6777666532  238999999999999999999999999999999999999    777779999999998764322 


Q ss_pred             CccccccccCCCCChhhhcCC-------CCCCCCcchhhHHHHHHHHHhCCCCCCCC----ChHHHHHHHHHhcCCCCCC
Q 012062          154 NTLTNRVITLWYRPPELLLGA-------TKYGPAVDMWSVGCIFAELLNGKPILPGK----NEAEQLSKIFELCGSPDET  222 (472)
Q Consensus       154 ~~~~~~~gt~~y~aPE~l~~~-------~~~~~~~DiwSlG~il~ell~G~~pf~~~----~~~~~~~~i~~~~~~~~~~  222 (472)
                       .....++|..|+|||++.+.       ..++.++|||||||++|+|++|+.||...    ...+.+.++...   .+..
T Consensus       171 -~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~---~p~~  246 (396)
T 4eut_A          171 -QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG---KPSG  246 (396)
T ss_dssp             -GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS---CCTT
T ss_pred             -ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC---CCcc
Confidence             33445789999999998641       34677999999999999999999999743    334444444432   2222


Q ss_pred             CCccCCCCCc-cccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          223 IWPGVSKMPA-YNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       223 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                      .|........ ...|......   ...+...++..+.+||++||..||++|+|+.|+++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          247 AISGVQKAENGPIDWSGDMPV---SCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             CCEEEECSTTCCEEEESSCCT---TCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             cchhheeccCCCcccCccCCc---ccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence            2222211110 0000000000   00122356778999999999999999999999854


No 207
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=3.8e-39  Score=348.04  Aligned_cols=229  Identities=19%  Similarity=0.268  Sum_probs=186.1

Q ss_pred             eccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-
Q 012062            4 EIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-   82 (472)
Q Consensus         4 ~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-   82 (472)
                      +..+++.||||+++...........+++|+++|++|+|+|||++++++..                 ..+|||||||.+ 
T Consensus       392 ~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-----------------~~~~lv~E~~~~g  454 (635)
T 4fl3_A          392 MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-----------------ESWMLVMEMAELG  454 (635)
T ss_dssp             CSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-----------------SSEEEEEECCTTE
T ss_pred             CCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-----------------CCEEEEEEccCCC
Confidence            45677899999998765555556788999999999999999999999964                 347999999986 


Q ss_pred             ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC--Ccccccc
Q 012062           83 DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN--NTLTNRV  160 (472)
Q Consensus        83 ~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~--~~~~~~~  160 (472)
                      +|.+++.. ...+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.+.....  .......
T Consensus       455 ~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~  533 (635)
T 4fl3_A          455 PLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK  533 (635)
T ss_dssp             EHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------------
T ss_pred             CHHHHHhh-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCC
Confidence            66666654 34699999999999999999999999999999999999999999999999999986643322  2223334


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCc
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS  239 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (472)
                      +|..|+|||++.+ ..++.++||||||||||+|++ |+.||.+.+..+....+........                   
T Consensus       534 ~t~~y~APE~~~~-~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~-------------------  593 (635)
T 4fl3_A          534 WPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC-------------------  593 (635)
T ss_dssp             -CGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC-------------------
T ss_pred             CceeeeChhhhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-------------------
Confidence            5788999999976 578999999999999999998 9999999998887777654321110                   


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                ...++.++.+||.+||..||++|||+.+|++
T Consensus       594 ----------p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          594 ----------PAGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             ----------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ----------CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence                      1246778999999999999999999999975


No 208
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=5.1e-39  Score=324.37  Aligned_cols=240  Identities=18%  Similarity=0.183  Sum_probs=179.9

Q ss_pred             CCCEEEEEEeecCCcCC---------CchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEE
Q 012062            7 TGEIVALKKIRMDNEKE---------GFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVF   77 (472)
Q Consensus         7 tg~~vAlK~i~~~~~~~---------~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVm   77 (472)
                      +++.||||++.......         ......+.|+.+++.++|+||+++++++.....            ....+||||
T Consensus        64 ~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~------------~~~~~~lv~  131 (364)
T 3op5_A           64 SDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKN------------GKSYRFMIM  131 (364)
T ss_dssp             TTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEEET------------TEEEEEEEE
T ss_pred             cccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeeccC------------CcceEEEEE
Confidence            46899999987653210         011233456667778889999999999876210            134689999


Q ss_pred             ecCCCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEc--CCCCeEEeeccceeeeccCCCC-
Q 012062           78 EYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID--NEGNLKLADFGLARSFSYDHNN-  154 (472)
Q Consensus        78 Ey~~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~--~~~~vkL~DFG~a~~~~~~~~~-  154 (472)
                      |||.++|.+++......+++.+++.|+.||+.||+|||+++|+||||||+||||+  .++.+||+|||+++.+...... 
T Consensus       132 e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~  211 (364)
T 3op5_A          132 DRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHK  211 (364)
T ss_dssp             ECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCC
T ss_pred             eCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCccc
Confidence            9996688888877666799999999999999999999999999999999999999  8889999999999876543221 


Q ss_pred             -----ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCC
Q 012062          155 -----TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK  229 (472)
Q Consensus       155 -----~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  229 (472)
                           .....++|+.|+|||++.+ ..++.++||||||||||+|++|+.||.+......+.........           
T Consensus       212 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~-----------  279 (364)
T 3op5_A          212 AYAADPKRCHDGTIEFTSIDAHNG-VAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYR-----------  279 (364)
T ss_dssp             CSSCCSSCCCCCCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHH-----------
T ss_pred             ccccCcccccCCCCCccCHHHhCC-CCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhh-----------
Confidence                 1233458999999999987 56899999999999999999999999864433332222111000           


Q ss_pred             CCccccCCCchhhhhhHHHHh--hhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          230 MPAYNHFKPSRTMKRRVREVF--RHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                ..........+  ..++.++.+||.+||..||++|||+.+|++
T Consensus       280 ----------~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          280 ----------ENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             ----------HCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ----------hhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence                      00000011111  356889999999999999999999999874


No 209
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=6.9e-39  Score=316.03  Aligned_cols=234  Identities=19%  Similarity=0.248  Sum_probs=178.3

Q ss_pred             CCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Chh
Q 012062            7 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLT   85 (472)
Q Consensus         7 tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l~   85 (472)
                      +++.||||+++...........+.+|+.++++++|+||+++++++...+..           ....+|+||||+.+ +|.
T Consensus        61 ~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-----------~~~~~~~v~e~~~~~~L~  129 (313)
T 3brb_A           61 TSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ-----------GIPKPMVILPFMKYGDLH  129 (313)
T ss_dssp             CEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------------------CEEEEEECCTTCBHH
T ss_pred             ceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc-----------CCcccEEEEecccCCCHH
Confidence            666899999987654444456788999999999999999999999863211           12357999999996 666


Q ss_pred             hhhc-----CCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC-Cccccc
Q 012062           86 GLAD-----RPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN-NTLTNR  159 (472)
Q Consensus        86 ~~~~-----~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~-~~~~~~  159 (472)
                      .++.     .....+++.+++.|+.||+.||.|||+++|+||||||+||||+.++.+||+|||++..+..... ......
T Consensus       130 ~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  209 (313)
T 3brb_A          130 TYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIA  209 (313)
T ss_dssp             HHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC---------------
T ss_pred             HHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceecccccccCccccc
Confidence            6552     2335699999999999999999999999999999999999999999999999999976543221 122233


Q ss_pred             cccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          160 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       160 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                      .+++.|+|||++.+ ..++.++|||||||++|+|++ |..||...+..+....+.......                   
T Consensus       210 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------  269 (313)
T 3brb_A          210 KMPVKWIAIESLAD-RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLK-------------------  269 (313)
T ss_dssp             -CCGGGSCHHHHHS-SCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC-------------------
T ss_pred             CCCccccCchhhcC-CCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCC-------------------
Confidence            45788999999986 678999999999999999999 899999988877776665432110                   


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                ....++..+.+||.+||..||++|||+.+++++
T Consensus       270 ----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          270 ----------QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             ----------CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             ----------CCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                      012466789999999999999999999999863


No 210
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.4e-38  Score=310.98  Aligned_cols=233  Identities=22%  Similarity=0.315  Sum_probs=184.0

Q ss_pred             ceeccCCC---EEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEe
Q 012062            2 AREIKTGE---IVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFE   78 (472)
Q Consensus         2 a~~~~tg~---~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmE   78 (472)
                      |++..+++   .||||+++..... .....+.+|+.++++++|+||+++++++...               +...|+|||
T Consensus        40 ~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---------------~~~~~~v~e  103 (298)
T 3pls_A           40 GEYIDQAQNRIQCAIKSLSRITEM-QQVEAFLREGLLMRGLNHPNVLALIGIMLPP---------------EGLPHVLLP  103 (298)
T ss_dssp             EEEECSSSCEEEEEEEEETTCCSH-HHHHHHHHHHHHHHTCCCTTBCCCCEEECCS---------------SSCCEEEEC
T ss_pred             EEEecCCCceeeeeeeeccccccH-HHHHHHHHHHHHHHhCCCCCeeeEEEEEecC---------------CCCcEEEEe
Confidence            44444444   7999998754322 2345678999999999999999999999752               234589999


Q ss_pred             cCC-CChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCC---CC
Q 012062           79 YMD-HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDH---NN  154 (472)
Q Consensus        79 y~~-g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~---~~  154 (472)
                      |+. ++|.+++......+++.+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+....   ..
T Consensus       104 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  183 (298)
T 3pls_A          104 YMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQ  183 (298)
T ss_dssp             CCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSC
T ss_pred             cccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccc
Confidence            997 57888887766679999999999999999999999999999999999999999999999999997553321   12


Q ss_pred             ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCcc
Q 012062          155 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY  233 (472)
Q Consensus       155 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  233 (472)
                      ......+|..|+|||++.+ ..++.++|||||||++|+|++ +.++|...+..+....+........             
T Consensus       184 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------------  249 (298)
T 3pls_A          184 QHRHARLPVKWTALESLQT-YRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQ-------------  249 (298)
T ss_dssp             CSSCTTCGGGGSCHHHHTT-CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCC-------------
T ss_pred             cCcCCCCCccccChhhhcc-CCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCC-------------
Confidence            2233456889999999976 568899999999999999999 5566666666666555543321111             


Q ss_pred             ccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          234 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                      ...+++.+.+||++||..||.+|||+.++++
T Consensus       250 ----------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          250 ----------------PEYCPDSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             ----------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------------CccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                            1135678999999999999999999999985


No 211
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=3.6e-39  Score=317.90  Aligned_cols=233  Identities=22%  Similarity=0.376  Sum_probs=185.3

Q ss_pred             eccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC
Q 012062            4 EIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH   82 (472)
Q Consensus         4 ~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g   82 (472)
                      +..+++.||||+++..... .....+.+|+++++++ +|+||+++++++...               ...+||||||+.+
T Consensus        53 ~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~---------------~~~~~lv~e~~~~  116 (316)
T 2xir_A           53 KTATCRTVAVKMLKEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKP---------------GGPLMVIVEFCKF  116 (316)
T ss_dssp             STTCEEEEEEEEECTTCCH-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT---------------TSCCEEEEECCTT
T ss_pred             ccccceEEEEEecccCCCc-HHHHHHHHHHHHHHhcccCCCeeeEEEEEecC---------------CCceEEEEEcCCC
Confidence            3568899999999865322 2345678999999999 699999999998752               3358999999986


Q ss_pred             -ChhhhhcCCCC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeecccee
Q 012062           83 -DLTGLADRPGL---------------RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR  146 (472)
Q Consensus        83 -~l~~~~~~~~~---------------~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~  146 (472)
                       +|.+++.....               .+++..++.++.||+.||.|||+++|+||||||+||||+.++.+||+|||+++
T Consensus       117 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~  196 (316)
T 2xir_A          117 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR  196 (316)
T ss_dssp             EEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGS
T ss_pred             CcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCcccc
Confidence             77777765432               28899999999999999999999999999999999999999999999999997


Q ss_pred             eeccCCC-CccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCC
Q 012062          147 SFSYDHN-NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIW  224 (472)
Q Consensus       147 ~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~  224 (472)
                      ....... .......+|+.|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+.+...........    
T Consensus       197 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~----  271 (316)
T 2xir_A          197 DIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR----  271 (316)
T ss_dssp             CTTTCTTSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCC----
T ss_pred             ccccCccceeccCCCcceeecCchhhcc-ccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCC----
Confidence            6543322 12233456889999999986 568999999999999999998 9999988775554444433221110    


Q ss_pred             ccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          225 PGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                              ....++..+.+||.+||..||++|||+.|+++|
T Consensus       272 ------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          272 ------------------------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             ------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                                    011356789999999999999999999999975


No 212
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=4.5e-39  Score=319.15  Aligned_cols=244  Identities=18%  Similarity=0.273  Sum_probs=182.4

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Ch
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DL   84 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l   84 (472)
                      .+++.||||+++...... ....+.+|++++++++|+||+++++++..                .+.+||||||+.+ +|
T Consensus        52 ~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----------------~~~~~lv~e~~~~~~L  114 (326)
T 3uim_A           52 ADGTLVAVKRLKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGFCMT----------------PTERLLVYPYMANGSV  114 (326)
T ss_dssp             SSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEECC----------------SSCCEEEEECCTTCBH
T ss_pred             cCCCEEEEEEeccccCch-HHHHHHHHHHHHHhccCCCccceEEEEec----------------CCceEEEEEeccCCCH
Confidence            478999999998654332 23468899999999999999999999976                4567999999986 67


Q ss_pred             hhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           85 TGLADRP---GLRFTVPQIKCYMKQLLTGLHYCHVN---QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        85 ~~~~~~~---~~~l~~~~i~~i~~Qll~aL~~LH~~---giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      .+++...   ...+++..++.|+.||+.||+|||++   +|+||||||+||||+.++.+||+|||+++............
T Consensus       115 ~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  194 (326)
T 3uim_A          115 ASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA  194 (326)
T ss_dssp             HHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECC
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCccccccccc
Confidence            6666543   23489999999999999999999999   99999999999999999999999999998776555555555


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCC----ChHHHHHHHHHhcCCCCCCCCccCCCCCccc
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGK----NEAEQLSKIFELCGSPDETIWPGVSKMPAYN  234 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  234 (472)
                      ..+|+.|+|||++.+ ..++.++||||||||+|+|++|+.||...    .....+.........  .........     
T Consensus       195 ~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----  266 (326)
T 3uim_A          195 VRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK--EKKLEALVD-----  266 (326)
T ss_dssp             CCSCGGGCCHHHHHH-SEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTS--SCCSTTSSC-----
T ss_pred             ccCCcCccCHHHhcc-CCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhh--chhhhhhcC-----
Confidence            678999999999976 56889999999999999999999999621    111111111111000  000000000     


Q ss_pred             cCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCC
Q 012062          235 HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSE  282 (472)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~  282 (472)
                       ..       .........+..+.+||.+||..||++|||+.||++|-
T Consensus       267 -~~-------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L  306 (326)
T 3uim_A          267 -VD-------LQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML  306 (326)
T ss_dssp             -TT-------CTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred             -hh-------hccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHh
Confidence             00       00011123557899999999999999999999999863


No 213
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=1.7e-38  Score=307.91  Aligned_cols=225  Identities=21%  Similarity=0.392  Sum_probs=184.1

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Ch
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DL   84 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l   84 (472)
                      .+++.||||+++....   ....+.+|+++|++++|+||+++++++..                 +.+||||||+.+ +|
T Consensus        35 ~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----------------~~~~~v~e~~~~~~L   94 (279)
T 1qpc_A           35 NGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-----------------EPIYIITEYMENGSL   94 (279)
T ss_dssp             TTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-----------------SSCEEEEECCTTCBH
T ss_pred             cCCcEEEEEEecCCcc---cHHHHHHHHHHHHhCCCcCcceEEEEEcC-----------------CCcEEEEecCCCCCH
Confidence            3567899999975432   34578899999999999999999999863                 347999999975 77


Q ss_pred             hhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccccccC
Q 012062           85 TGLADRPG-LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITL  163 (472)
Q Consensus        85 ~~~~~~~~-~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~  163 (472)
                      .+++.... ..+++.+++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++...............+|.
T Consensus        95 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  174 (279)
T 1qpc_A           95 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI  174 (279)
T ss_dssp             HHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCT
T ss_pred             HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCcc
Confidence            77665432 25899999999999999999999999999999999999999999999999999876544333333445688


Q ss_pred             CCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhh
Q 012062          164 WYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTM  242 (472)
Q Consensus       164 ~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (472)
                      .|+|||++.+ ..++.++|||||||++|+|++ |+.||.+.+..+.+..+........                      
T Consensus       175 ~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------------  231 (279)
T 1qpc_A          175 KWTAPEAINY-GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR----------------------  231 (279)
T ss_dssp             TTSCHHHHHH-CEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC----------------------
T ss_pred             CccChhhhcc-CCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCC----------------------
Confidence            8999999976 567889999999999999999 9999999888777766643211100                      


Q ss_pred             hhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          243 KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       243 ~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                             ...++..+.+||.+||..||++|||+.++++
T Consensus       232 -------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          232 -------PDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             -------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------cccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence                   1246778999999999999999999999985


No 214
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=3.8e-39  Score=318.97  Aligned_cols=229  Identities=19%  Similarity=0.298  Sum_probs=185.6

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Ch
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DL   84 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l   84 (472)
                      .+++.||||+++..... .....+.+|++++++++|+||+++++++..                .+.+||||||+++ +|
T Consensus        53 ~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~~~~~L  115 (322)
T 1p4o_A           53 EPETRVAIKTVNEAASM-RERIEFLNEASVMKEFNCHHVVRLLGVVSQ----------------GQPTLVIMELMTRGDL  115 (322)
T ss_dssp             EEEEEEEEEECCTTSCH-HHHHHHHHHHHHGGGCCCTTBCCEEEEECS----------------SSSCEEEEECCTTCBH
T ss_pred             CCceEEEEEecccccCH-HHHHHHHHHHHHHHhcCCCCEeeeEEEEcc----------------CCccEEEEEeCCCCcH
Confidence            56789999999754322 234467899999999999999999999976                4568999999985 77


Q ss_pred             hhhhcCC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC-C
Q 012062           85 TGLADRP---------GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN-N  154 (472)
Q Consensus        85 ~~~~~~~---------~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~-~  154 (472)
                      .+++...         ...+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++....... .
T Consensus       116 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~  195 (322)
T 1p4o_A          116 KSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR  195 (322)
T ss_dssp             HHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEE
T ss_pred             HHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCccccccccccccc
Confidence            7766531         13578999999999999999999999999999999999999999999999999976543221 1


Q ss_pred             ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCcc
Q 012062          155 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY  233 (472)
Q Consensus       155 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  233 (472)
                      ......+|+.|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+....+........             
T Consensus       196 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------  261 (322)
T 1p4o_A          196 KGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK-------------  261 (322)
T ss_dssp             GGGSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCC-------------
T ss_pred             cccCCCCCCCccChhhhcc-CCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCC-------------
Confidence            2223456889999999876 568899999999999999999 8999999888777776654211100             


Q ss_pred             ccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          234 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                      ...++..+.+||.+||..||++|||+.|++++
T Consensus       262 ----------------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          262 ----------------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             ----------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                            12467789999999999999999999999875


No 215
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=2.2e-38  Score=311.98  Aligned_cols=233  Identities=29%  Similarity=0.399  Sum_probs=175.3

Q ss_pred             ceeccCCCEEEEEEeecCCc-CCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            2 AREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      |++..+++.||||+++.... .......+.+|+.++++++|+||+++++++..                .+.+||||||+
T Consensus        51 ~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~  114 (310)
T 2wqm_A           51 AACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE----------------DNELNIVLELA  114 (310)
T ss_dssp             EEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE----------------TTEEEEEEECC
T ss_pred             EEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc----------------CCcEEEEEecC
Confidence            67788999999999986432 22345567899999999999999999999986                56899999999


Q ss_pred             CC-ChhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcc
Q 012062           81 DH-DLTGLADR---PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTL  156 (472)
Q Consensus        81 ~g-~l~~~~~~---~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~  156 (472)
                      ++ +|.+++..   ....+++..++.++.||+.||.|||+++|+||||||+||||+.++.+||+|||++..+.... ...
T Consensus       115 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~  193 (310)
T 2wqm_A          115 DAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-TAA  193 (310)
T ss_dssp             CSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC--------------
T ss_pred             CCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC-ccc
Confidence            96 66665543   34568999999999999999999999999999999999999999999999999987654322 222


Q ss_pred             ccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhcCCCCCCCCccCCCCCccc
Q 012062          157 TNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNE--AEQLSKIFELCGSPDETIWPGVSKMPAYN  234 (472)
Q Consensus       157 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  234 (472)
                      ....+|..|+|||++.+ ..++.++|||||||++|+|++|..||.+...  ......+... ..+..             
T Consensus       194 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~-------------  258 (310)
T 2wqm_A          194 HSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC-DYPPL-------------  258 (310)
T ss_dssp             -----CCSSCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTT-CSCCC-------------
T ss_pred             cccCCCeeEeChHHhCC-CCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcc-cCCCC-------------
Confidence            34567999999999876 5688999999999999999999999976532  2333333221 11000             


Q ss_pred             cCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          235 HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                    ....++.++.+||.+||..||++|||+.++++
T Consensus       259 --------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          259 --------------PSDHYSEELRQLVNMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             --------------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------------cccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                          01246778999999999999999999999986


No 216
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=1.1e-38  Score=312.19  Aligned_cols=227  Identities=24%  Similarity=0.321  Sum_probs=182.0

Q ss_pred             CCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Chhh
Q 012062            8 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTG   86 (472)
Q Consensus         8 g~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l~~   86 (472)
                      ...||||+++.... ......+.+|+.++++++|+||+++++++...               ++.+||||||+++ +|.+
T Consensus        53 ~~~~avk~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---------------~~~~~~v~e~~~~~~L~~  116 (298)
T 3f66_A           53 KIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS---------------EGSPLVVLPYMKHGDLRN  116 (298)
T ss_dssp             CEEEEEEEETTCCS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS---------------SSCCEEEEECCTTCBHHH
T ss_pred             eeEEEEEecccCCC-HHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcC---------------CCceEEEEeCCCCCCHHH
Confidence            34689999875432 22345678999999999999999999986542               4567999999986 7878


Q ss_pred             hhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC---CccccccccC
Q 012062           87 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN---NTLTNRVITL  163 (472)
Q Consensus        87 ~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~---~~~~~~~gt~  163 (472)
                      ++......+++..++.|+.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.......   .......+|+
T Consensus       117 ~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~  196 (298)
T 3f66_A          117 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV  196 (298)
T ss_dssp             HHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCG
T ss_pred             HHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCc
Confidence            8777666799999999999999999999999999999999999999999999999999976543221   2223345678


Q ss_pred             CCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhh
Q 012062          164 WYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTM  242 (472)
Q Consensus       164 ~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (472)
                      .|+|||++.+ ..++.++|||||||++|+|++ +.+||...+..+....+........                      
T Consensus       197 ~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------  253 (298)
T 3f66_A          197 KWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ----------------------  253 (298)
T ss_dssp             GGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCC----------------------
T ss_pred             cccChHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCC----------------------
Confidence            8999999976 568899999999999999999 6788888777776666654321111                      


Q ss_pred             hhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          243 KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       243 ~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                             ...++..+.+||.+||..||++|||+.|+++
T Consensus       254 -------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          254 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             -------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------CccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                   0135678999999999999999999999985


No 217
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=7.8e-39  Score=316.94  Aligned_cols=236  Identities=25%  Similarity=0.375  Sum_probs=181.2

Q ss_pred             ceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCC
Q 012062            2 AREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD   81 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~   81 (472)
                      +++..+++.||||+++.... ......+.+|+++|++|+|+||+++++++...+              ...+||||||++
T Consensus        54 ~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--------------~~~~~lv~e~~~  118 (318)
T 3lxp_A           54 PTNDGTGEMVAVKALKADAG-PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG--------------AASLQLVMEYVP  118 (318)
T ss_dssp             SCC--CCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--------------TTEEEEEECCCT
T ss_pred             cCCCCCCcEEEEEEeccccC-hHHHHHHHHHHHHHHhCCCcchhhEEEEEecCC--------------CceEEEEEeccc
Confidence            45677999999999986532 223556789999999999999999999998632              457899999998


Q ss_pred             C-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCC--Ccccc
Q 012062           82 H-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN--NTLTN  158 (472)
Q Consensus        82 g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~--~~~~~  158 (472)
                      + +|.+++.+.  .+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||++........  .....
T Consensus       119 ~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  196 (318)
T 3lxp_A          119 LGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED  196 (318)
T ss_dssp             TCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---
T ss_pred             CCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccccccccccC
Confidence            6 777776554  389999999999999999999999999999999999999999999999999987654322  12233


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHH-----------HHHHHHHhcCCCCCCCCccC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE-----------QLSKIFELCGSPDETIWPGV  227 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~-----------~~~~i~~~~~~~~~~~~~~~  227 (472)
                      ..+|..|+|||++.+ ..++.++|||||||++|+|++|..||.......           ....+.+.......      
T Consensus       197 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  269 (318)
T 3lxp_A          197 GDSPVFWYAPECLKE-YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER------  269 (318)
T ss_dssp             CCCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCC------
T ss_pred             CCCCceeeChHHhcC-CCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccC------
Confidence            456888999999986 567889999999999999999999987543211           01111111000000      


Q ss_pred             CCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          228 SKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                         ......++.++.+||++||..||++|||+.|+++
T Consensus       270 -------------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          270 -------------------LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             -------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------------------CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                               0011246788999999999999999999999985


No 218
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=3.9e-39  Score=320.10  Aligned_cols=234  Identities=19%  Similarity=0.285  Sum_probs=184.7

Q ss_pred             eccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-
Q 012062            4 EIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-   82 (472)
Q Consensus         4 ~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-   82 (472)
                      +..+++.||||+++.... ......+.+|+.++++++|+||+++++++..                ...+||||||+++ 
T Consensus        56 ~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----------------~~~~~lv~e~~~~~  118 (327)
T 2yfx_A           56 NDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIVRCIGVSLQ----------------SLPRFILMELMAGG  118 (327)
T ss_dssp             ----CCEEEEEECCSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----------------SSSCEEEEECCTTE
T ss_pred             CCCccceEEEEEeccccc-hhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC----------------CCCcEEEEecCCCC
Confidence            567889999999974432 2234567899999999999999999999976                4567999999975 


Q ss_pred             ChhhhhcCCC------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCC---CCeEEeeccceeeeccCCC
Q 012062           83 DLTGLADRPG------LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE---GNLKLADFGLARSFSYDHN  153 (472)
Q Consensus        83 ~l~~~~~~~~------~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~---~~vkL~DFG~a~~~~~~~~  153 (472)
                      +|.+++....      ..+++.+++.++.||+.||.|||+++|+||||||+||||+.+   ..+||+|||++........
T Consensus       119 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~  198 (327)
T 2yfx_A          119 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY  198 (327)
T ss_dssp             EHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC---
T ss_pred             cHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccc
Confidence            7777765432      348999999999999999999999999999999999999944   4599999999875533221


Q ss_pred             -CccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCC
Q 012062          154 -NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMP  231 (472)
Q Consensus       154 -~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  231 (472)
                       .......+|+.|+|||++.+ ..++.++|||||||++|+|++ |..||...+..+.+..+........           
T Consensus       199 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~-----------  266 (327)
T 2yfx_A          199 YRKGGCAMLPVKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-----------  266 (327)
T ss_dssp             ---CCGGGSCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC-----------
T ss_pred             cccCCCcCCCcceeCHhHhcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCC-----------
Confidence             22233456889999999976 568999999999999999998 9999999888777766654321100           


Q ss_pred             ccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCC
Q 012062          232 AYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF  284 (472)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f  284 (472)
                                        ...++..+.+||.+||..||++|||+.||+++.|+
T Consensus       267 ------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~  301 (327)
T 2yfx_A          267 ------------------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  301 (327)
T ss_dssp             ------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ------------------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence                              12467789999999999999999999999998765


No 219
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=3.1e-39  Score=320.85  Aligned_cols=236  Identities=25%  Similarity=0.374  Sum_probs=183.8

Q ss_pred             eccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-
Q 012062            4 EIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-   82 (472)
Q Consensus         4 ~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-   82 (472)
                      +..+++.||||+++....  .....+.+|++++++++|+||+++++++...+              ...+||||||+++ 
T Consensus        48 ~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--------------~~~~~lv~e~~~~~  111 (327)
T 3lxl_A           48 GDNTGALVAVKQLQHSGP--DQQRDFQREIQILKALHSDFIVKYRGVSYGPG--------------RQSLRLVMEYLPSG  111 (327)
T ss_dssp             SSSCSEEEEEEEESSCCH--HHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--------------SCEEEEEEECCTTC
T ss_pred             CCCcceEEEEEEeccCCH--HHHHHHHHHHHHHHhcCCCceeEEEEEEecCC--------------CceEEEEEeecCCC
Confidence            678999999999975532  23456789999999999999999999987522              5678999999975 


Q ss_pred             ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC--cccccc
Q 012062           83 DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN--TLTNRV  160 (472)
Q Consensus        83 ~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~--~~~~~~  160 (472)
                      +|.+++......+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||++.........  ......
T Consensus       112 ~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  191 (327)
T 3lxl_A          112 CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ  191 (327)
T ss_dssp             BHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCC
T ss_pred             CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCC
Confidence            677777654456999999999999999999999999999999999999999999999999999876543221  223345


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHH-----------HHHHHhcCCCCCCCCccCCC
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL-----------SKIFELCGSPDETIWPGVSK  229 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~-----------~~i~~~~~~~~~~~~~~~~~  229 (472)
                      +|..|+|||++.+ ..++.++|||||||++|+|++|..||.........           ..+.+......         
T Consensus       192 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  261 (327)
T 3lxl_A          192 SPIFWYAPESLSD-NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQ---------  261 (327)
T ss_dssp             SCGGGSCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTC---------
T ss_pred             ccccccCHHHhcc-CCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhccc---------
Confidence            6888999999976 56789999999999999999999998754332111           00100000000         


Q ss_pred             CCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          230 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                      .......++..+.+||++||..||++|||+.||+++
T Consensus       262 ----------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          262 ----------------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             ----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                            000113567899999999999999999999999753


No 220
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=9.9e-39  Score=319.91  Aligned_cols=242  Identities=19%  Similarity=0.147  Sum_probs=184.1

Q ss_pred             ceecc---CCCEEEEEEeecCCcCC---------CchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCc
Q 012062            2 AREIK---TGEIVALKKIRMDNEKE---------GFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY   69 (472)
Q Consensus         2 a~~~~---tg~~vAlK~i~~~~~~~---------~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~   69 (472)
                      |++..   ++..||||++.......         .....+.+|+.+++.++|+||+++++++....            ..
T Consensus        56 ~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~------------~~  123 (345)
T 2v62_A           56 AFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEF------------KG  123 (345)
T ss_dssp             EEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEES------------SS
T ss_pred             EEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccccc------------CC
Confidence            55655   88999999998653210         11234568899999999999999999987621            11


Q ss_pred             CCeEEEEEecCCCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCC--CeEEeeccceee
Q 012062           70 RGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG--NLKLADFGLARS  147 (472)
Q Consensus        70 ~~~~~iVmEy~~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~--~vkL~DFG~a~~  147 (472)
                      ...+||||||+.++|.+++.... .+++.+++.|+.||+.||+|||+++|+||||||+||||+.++  .+||+|||+++.
T Consensus       124 ~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~  202 (345)
T 2v62_A          124 RSYRFMVMERLGIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYR  202 (345)
T ss_dssp             CEEEEEEEECEEEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEE
T ss_pred             CcEEEEEEeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCcee
Confidence            45789999999667877776544 799999999999999999999999999999999999999877  999999999987


Q ss_pred             eccCCC------CccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCC--ChHHHHHHHHHhcCCC
Q 012062          148 FSYDHN------NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGK--NEAEQLSKIFELCGSP  219 (472)
Q Consensus       148 ~~~~~~------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~--~~~~~~~~i~~~~~~~  219 (472)
                      +.....      .......+|..|+|||++.+ ..++.++|||||||++|+|++|+.||...  +...............
T Consensus       203 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~  281 (345)
T 2v62_A          203 YCPNGNHKQYQENPRKGHNGTIEFTSLDAHKG-VALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDEL  281 (345)
T ss_dssp             SSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHT-CCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTT
T ss_pred             cccccccccchhccccccCCCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccc
Confidence            643221      11244578999999999987 57899999999999999999999999653  2222222221111000


Q ss_pred             CCCCCccCCCCCccccCCCchhhhhhHHHHhh--hccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          220 DETIWPGVSKMPAYNHFKPSRTMKRRVREVFR--HFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                             .........  .++.++.+||.+||..||++|||+++|++
T Consensus       282 -----------------------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          282 -----------------------PQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             -----------------------THHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             -----------------------cHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence                                   011111111  57889999999999999999999999975


No 221
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=6.8e-39  Score=333.19  Aligned_cols=224  Identities=21%  Similarity=0.367  Sum_probs=184.5

Q ss_pred             CCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Chh
Q 012062            7 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLT   85 (472)
Q Consensus         7 tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l~   85 (472)
                      +++.||||+++....   ....+++|+.+|++|+|+|||++++++..                 ..+|||||||.+ +|.
T Consensus       211 ~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~l~~~~~~-----------------~~~~lv~e~~~~g~L~  270 (454)
T 1qcf_A          211 KHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKLHAVVTK-----------------EPIYIITEFMAKGSLL  270 (454)
T ss_dssp             TTEEEEEEEECTTSB---CHHHHHHHHHHHTTCCCTTBCCEEEEECS-----------------SSCEEEECCCTTCBHH
T ss_pred             CccEEEEEEecCCCc---cHHHHHHHHHHHhhCCCCCEeeEEEEEeC-----------------CccEEEEeecCCCcHH
Confidence            567899999986432   35678899999999999999999999853                 357999999985 777


Q ss_pred             hhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccccccCC
Q 012062           86 GLADRPG-LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLW  164 (472)
Q Consensus        86 ~~~~~~~-~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~  164 (472)
                      +++.... ..+++..++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++..............+|..
T Consensus       271 ~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~  350 (454)
T 1qcf_A          271 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK  350 (454)
T ss_dssp             HHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGG
T ss_pred             HHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCccccc
Confidence            7776532 358899999999999999999999999999999999999999999999999997654322222233345788


Q ss_pred             CCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhhh
Q 012062          165 YRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMK  243 (472)
Q Consensus       165 y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (472)
                      |+|||++.. ..++.++|||||||+||||++ |+.||.+.+..+.+..+......+.                       
T Consensus       351 y~aPE~~~~-~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~-----------------------  406 (454)
T 1qcf_A          351 WTAPEAINF-GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR-----------------------  406 (454)
T ss_dssp             GSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCC-----------------------
T ss_pred             ccCHHHhcc-CCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-----------------------
Confidence            999999976 568999999999999999999 9999999988888777755322111                       


Q ss_pred             hhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          244 RRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       244 ~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                            ...+++++.+||.+||..||++|||+++|++
T Consensus       407 ------~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          407 ------PENCPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             ------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------CCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence                  1136778999999999999999999999975


No 222
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=7e-39  Score=318.73  Aligned_cols=233  Identities=23%  Similarity=0.363  Sum_probs=185.8

Q ss_pred             ceeccCC-----CEEEEEEeecCCcCCCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEE
Q 012062            2 AREIKTG-----EIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYM   75 (472)
Q Consensus         2 a~~~~tg-----~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i   75 (472)
                      |++..++     +.||||+++..... .....+.+|+++|++| +|+||+++++++..                .+.+||
T Consensus        65 ~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~----------------~~~~~l  127 (333)
T 2i1m_A           65 ATAFGLGKEDAVLKVAVKMLKSTAHA-DEKEALMSELKIMSHLGQHENIVNLLGACTH----------------GGPVLV  127 (333)
T ss_dssp             EEETTCSSSCCCCEEEEEEECTTCCH-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----------------SSSCEE
T ss_pred             EEecCCCcccchhHHHHHhcccccCh-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEec----------------CCceEE
Confidence            4455554     47999999765322 2345688999999999 89999999999976                456899


Q ss_pred             EEecCCC-ChhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEee
Q 012062           76 VFEYMDH-DLTGLADRP-------------GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLAD  141 (472)
Q Consensus        76 VmEy~~g-~l~~~~~~~-------------~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~D  141 (472)
                      ||||+++ +|.+++...             ...+++..++.++.||+.||+|||+++|+||||||+||||+.++.+||+|
T Consensus       128 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~D  207 (333)
T 2i1m_A          128 ITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGD  207 (333)
T ss_dssp             EEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCC
T ss_pred             EEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECc
Confidence            9999986 777766532             33589999999999999999999999999999999999999999999999


Q ss_pred             ccceeeeccCCCC-ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCC
Q 012062          142 FGLARSFSYDHNN-TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSP  219 (472)
Q Consensus       142 FG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~  219 (472)
                      ||++......... ......+|..|+|||++.+ ..++.++||||||||+|+|++ |..||.+......+..+.......
T Consensus       208 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~  286 (333)
T 2i1m_A          208 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQM  286 (333)
T ss_dssp             CGGGCCGGGCTTSEECSSCEECGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCC
T ss_pred             cccccccccccceeecCCCCCCccccCHHHhcc-CCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCC
Confidence            9999866443222 2233456788999999886 568999999999999999998 999999877666665555432211


Q ss_pred             CCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          220 DETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                      ..                            ...++..+.+||.+||..||.+|||+.|+++
T Consensus       287 ~~----------------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          287 AQ----------------------------PAFAPKNIYSIMQACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             CC----------------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CC----------------------------CCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            10                            0124678999999999999999999999986


No 223
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=6.2e-39  Score=322.18  Aligned_cols=244  Identities=14%  Similarity=0.116  Sum_probs=176.2

Q ss_pred             CCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCC-cCCeEEEEEecCCCChh
Q 012062            7 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNK-YRGSTYMVFEYMDHDLT   85 (472)
Q Consensus         7 tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~iVmEy~~g~l~   85 (472)
                      +++.||||+++..       ..+.+|++++++++|+|||++++.+........ ....+... ....+||||||+.++|.
T Consensus        74 ~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~lv~e~~~~~L~  145 (352)
T 2jii_A           74 QKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAI-PTCMGFGVHQDKYRFLVLPSLGRSLQ  145 (352)
T ss_dssp             ---CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSC-CCCCEEEEETTTEEEEEEECCCEEHH
T ss_pred             cCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhccCCccCc-cchhhccccCCcEEEEEecCCCcCHH
Confidence            4899999999744       357899999999999999984433221100000 00000000 14678999999977888


Q ss_pred             hhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCC--CeEEeeccceeeeccCCCC------cc
Q 012062           86 GLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG--NLKLADFGLARSFSYDHNN------TL  156 (472)
Q Consensus        86 ~~~~~~-~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~--~vkL~DFG~a~~~~~~~~~------~~  156 (472)
                      +++... ...+++.+++.|+.||+.||+|||+++|+||||||+||||+.++  .+||+|||+++.+......      ..
T Consensus       146 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  225 (352)
T 2jii_A          146 SALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSR  225 (352)
T ss_dssp             HHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSS
T ss_pred             HHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCcccccccccc
Confidence            887654 34699999999999999999999999999999999999999988  8999999999776532211      22


Q ss_pred             ccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCC-hHH-HHHHHHHhcCCCCCCCCccCCCCCccc
Q 012062          157 TNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKN-EAE-QLSKIFELCGSPDETIWPGVSKMPAYN  234 (472)
Q Consensus       157 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~-~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~  234 (472)
                      ....+|+.|+|||++.+ ..++.++||||||||||+|++|+.||.... ..+ ...........+.... ...       
T Consensus       226 ~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------  296 (352)
T 2jii_A          226 SPHEGDLEFISMDLHKG-CGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFV-GPC-------  296 (352)
T ss_dssp             CTTCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEE-CTT-------
T ss_pred             ccccCCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhh-hhc-------
Confidence            34478999999999986 568999999999999999999999998764 223 3322222211111100 000       


Q ss_pred             cCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          235 HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                   ..+..++.++.+||.+||..||++|||+++|++
T Consensus       297 -------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          297 -------------GHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             -------------SCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             -------------cccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence                         001246788999999999999999999999975


No 224
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=4.4e-39  Score=319.42  Aligned_cols=250  Identities=22%  Similarity=0.239  Sum_probs=176.4

Q ss_pred             CCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Chh
Q 012062            7 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLT   85 (472)
Q Consensus         7 tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l~   85 (472)
                      +++.||||+++....   ......+|+.+|++++|+|||++++++.....            ....+||||||+++ +|.
T Consensus        46 ~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~------------~~~~~~lv~e~~~~g~L~  110 (322)
T 3soc_A           46 LNEYVAVKIFPIQDK---QSWQNEYEVYSLPGMKHENILQFIGAEKRGTS------------VDVDLWLITAFHEKGSLS  110 (322)
T ss_dssp             TTEEEEEEEECGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS------------SSEEEEEEEECCTTCBHH
T ss_pred             CCCEEEEEEeecCch---HHHHHHHHHHHHhcCCCCCchhhcceeccCCC------------CCceEEEEEecCCCCCHH
Confidence            478999999975432   23345679999999999999999999986321            13458999999986 777


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC----------CccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC-
Q 012062           86 GLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN----------QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN-  154 (472)
Q Consensus        86 ~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~----------giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~-  154 (472)
                      +++...  .+++.+++.|+.||+.||+|||++          +|+||||||+||||+.++.+||+|||+++.+...... 
T Consensus       111 ~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~  188 (322)
T 3soc_A          111 DFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAG  188 (322)
T ss_dssp             HHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCC
T ss_pred             HHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCcc
Confidence            777553  489999999999999999999999          9999999999999999999999999999876543322 


Q ss_pred             ccccccccCCCCChhhhcCC----CCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCC
Q 012062          155 TLTNRVITLWYRPPELLLGA----TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM  230 (472)
Q Consensus       155 ~~~~~~gt~~y~aPE~l~~~----~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  230 (472)
                      .....++|+.|+|||++.+.    ..++.++||||||||+|+|++|+.||.+..+...+.........+....+......
T Consensus       189 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (322)
T 3soc_A          189 DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVH  268 (322)
T ss_dssp             CCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTT
T ss_pred             ccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhc
Confidence            23345789999999999763    23456789999999999999999999865431110000000000000000000000


Q ss_pred             CccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          231 PAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                         ....+..  ...  ......+.++.+||++||..||++|||+.||++
T Consensus       269 ---~~~~~~~--~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          269 ---KKKRPVL--RDY--WQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             ---SCCCCCC--CGG--GGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---ccCCCCc--ccc--ccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence               0000000  000  000123456999999999999999999999985


No 225
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.5e-38  Score=340.49  Aligned_cols=227  Identities=19%  Similarity=0.261  Sum_probs=183.4

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Ch
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DL   84 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l   84 (472)
                      .++..||||+++.... ......+++|+++|++|+|+|||++++++..                 +.+|||||||.+ +|
T Consensus       361 ~~~~~vAvK~~~~~~~-~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-----------------~~~~lv~E~~~~g~L  422 (613)
T 2ozo_A          361 KKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-----------------EALMLVMEMAGGGPL  422 (613)
T ss_dssp             SCEEEEEEEECCCCCS-STTHHHHHHHHHHHTTCCCTTBCCEEEEEES-----------------SSEEEEEECCTTCBH
T ss_pred             CCcEEEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-----------------CCeEEEEEeCCCCcH
Confidence            4566799999986533 2345678999999999999999999999974                 248999999986 67


Q ss_pred             hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC--cccccccc
Q 012062           85 TGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN--TLTNRVIT  162 (472)
Q Consensus        85 ~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~--~~~~~~gt  162 (472)
                      .+++......+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.+......  ......+|
T Consensus       423 ~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~  502 (613)
T 2ozo_A          423 HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP  502 (613)
T ss_dssp             HHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------C
T ss_pred             HHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCc
Confidence            7777666667999999999999999999999999999999999999999999999999999765432221  11222346


Q ss_pred             CCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchh
Q 012062          163 LWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRT  241 (472)
Q Consensus       163 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (472)
                      +.|+|||++.. ..++.++||||||||||||++ |+.||.+.+..+.+..+.......                      
T Consensus       503 ~~y~APE~~~~-~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~----------------------  559 (613)
T 2ozo_A          503 LKWYAPECINF-RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME----------------------  559 (613)
T ss_dssp             CTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCC----------------------
T ss_pred             cceeCHhhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC----------------------
Confidence            88999999976 578999999999999999998 999999998888777765432110                      


Q ss_pred             hhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          242 MKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                             ....++.++.+||.+||..||++|||+.+|++
T Consensus       560 -------~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          560 -------CPPECPPELYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             -------CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             -------CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                   01246778999999999999999999999864


No 226
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=1.1e-38  Score=309.28  Aligned_cols=243  Identities=24%  Similarity=0.410  Sum_probs=185.4

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++...      ..+.+|++++++++|+||+++++++.....................+||||||+
T Consensus        29 ~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  102 (284)
T 2a19_B           29 KAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFC  102 (284)
T ss_dssp             EEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCC
T ss_pred             EEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEecc
Confidence            36788899999999998543      256789999999999999999999864211000000001112245689999999


Q ss_pred             CC-ChhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           81 DH-DLTGLADR-PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        81 ~g-~l~~~~~~-~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      ++ +|.+++.. ....+++..++.++.||+.||.|||+++|+||||||+||||+.++.+||+|||++.......  ....
T Consensus       103 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~  180 (284)
T 2a19_B          103 DKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG--KRTR  180 (284)
T ss_dssp             CSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCS--CCCC
T ss_pred             CCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccc--cccc
Confidence            96 77777653 23468999999999999999999999999999999999999999999999999998765432  2334


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                      ..+|..|+|||++.+ ..++.++|||||||++|+|++|..+|...  ......+....                      
T Consensus       181 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~~~~----------------------  235 (284)
T 2a19_B          181 SKGTLRYMSPEQISS-QDYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDLRDGI----------------------  235 (284)
T ss_dssp             CCSCCTTSCHHHHHC-SCCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHHHTTC----------------------
T ss_pred             cCCcccccChhhhcc-CCCcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHhhccc----------------------
Confidence            568999999999986 56899999999999999999998876421  11111111100                      


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCC
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT  286 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~  286 (472)
                                ....++..+++||.+||..||++|||+.|++++.+.+.
T Consensus       236 ----------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          236 ----------ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK  273 (284)
T ss_dssp             ----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred             ----------ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence                      01236678999999999999999999999999876643


No 227
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-38  Score=323.28  Aligned_cols=227  Identities=24%  Similarity=0.315  Sum_probs=174.3

Q ss_pred             CEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Chhhh
Q 012062            9 EIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGL   87 (472)
Q Consensus         9 ~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l~~~   87 (472)
                      ..||||+++... .......+.+|+.++++++||||+++++++...               ++.+||||||+++ +|.++
T Consensus       118 ~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~---------------~~~~~lv~e~~~~g~L~~~  181 (373)
T 3c1x_A          118 IHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS---------------EGSPLVVLPYMKHGDLRNF  181 (373)
T ss_dssp             EEEEEEECCSCS-CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC---------------SSCCEEEEECCTTCBHHHH
T ss_pred             EEEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---------------CCCeEEEEECCCCCCHHHH
Confidence            468999987533 223456788999999999999999999987541               3467999999986 78888


Q ss_pred             hcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC---ccccccccCC
Q 012062           88 ADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN---TLTNRVITLW  164 (472)
Q Consensus        88 ~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~---~~~~~~gt~~  164 (472)
                      +......+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.+......   ......+|..
T Consensus       182 l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~  261 (373)
T 3c1x_A          182 IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK  261 (373)
T ss_dssp             HHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------------------CCGG
T ss_pred             HhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCccc
Confidence            8776667899999999999999999999999999999999999999999999999999765432211   1233456788


Q ss_pred             CCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhhh
Q 012062          165 YRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMK  243 (472)
Q Consensus       165 y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (472)
                      |+|||++.+ ..++.++|||||||++|+|++ |.+||...+..+....+........                       
T Consensus       262 y~aPE~~~~-~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~-----------------------  317 (373)
T 3c1x_A          262 WMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-----------------------  317 (373)
T ss_dssp             GSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCC-----------------------
T ss_pred             ccChHHhcC-CCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCC-----------------------
Confidence            999999986 578999999999999999999 7888988777666555543211100                       


Q ss_pred             hhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          244 RRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       244 ~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                            ...++..+.+||.+||..||++|||+.|++++
T Consensus       318 ------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          318 ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             ------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                  12366789999999999999999999999853


No 228
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=5.5e-38  Score=325.99  Aligned_cols=222  Identities=21%  Similarity=0.354  Sum_probs=181.8

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Ch
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DL   84 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l   84 (472)
                      .+++.||||+++.+.    ....+.+|+.+|++|+|+|||++++++...               .+.+|||||||.+ +|
T Consensus       214 ~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---------------~~~~~iv~e~~~~g~L  274 (450)
T 1k9a_A          214 YRGNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE---------------KGGLYIVTEYMAKGSL  274 (450)
T ss_dssp             ETTEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECT---------------TSCEEEEEECCTTCBH
T ss_pred             ecCCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcC---------------CCceEEEEEecCCCcH
Confidence            357899999997543    345788999999999999999999998652               3368999999985 77


Q ss_pred             hhhhcCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccccccC
Q 012062           85 TGLADRPGL-RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITL  163 (472)
Q Consensus        85 ~~~~~~~~~-~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~  163 (472)
                      .+++.+... .+++..++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.....    .....++.
T Consensus       275 ~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~~~~~~  350 (450)
T 1k9a_A          275 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QDTGKLPV  350 (450)
T ss_dssp             HHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC----------CCCT
T ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc----ccCCCCCc
Confidence            777765432 3799999999999999999999999999999999999999999999999999854322    12235688


Q ss_pred             CCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhh
Q 012062          164 WYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTM  242 (472)
Q Consensus       164 ~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (472)
                      .|+|||++.+ ..++.++|||||||+||+|++ |+.||...+..+.+..+.......                       
T Consensus       351 ~y~aPE~~~~-~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~-----------------------  406 (450)
T 1k9a_A          351 KWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD-----------------------  406 (450)
T ss_dssp             TTSCHHHHHS-SCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCC-----------------------
T ss_pred             ceeCHHHhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-----------------------
Confidence            9999999986 578999999999999999998 999999888777766664321110                       


Q ss_pred             hhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          243 KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       243 ~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                            ....++..+.+||.+||..||++|||+.+|++
T Consensus       407 ------~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          407 ------APDGCPPAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             ------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                  01246778999999999999999999999974


No 229
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=1.9e-38  Score=313.30  Aligned_cols=228  Identities=17%  Similarity=0.241  Sum_probs=181.5

Q ss_pred             CEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Chhhh
Q 012062            9 EIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGL   87 (472)
Q Consensus         9 ~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l~~~   87 (472)
                      ..||||+++...........+.+|+.++++++|+||+++++++..                ...+||||||+++ +|.++
T Consensus        56 ~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----------------~~~~~iv~e~~~~~~L~~~  119 (319)
T 2y4i_B           56 GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS----------------PPHLAIITSLCKGRTLYSV  119 (319)
T ss_dssp             SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC----------------SSCEEEECBCCCSEEHHHH
T ss_pred             CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec----------------CCceEEEeecccCCcHHHH
Confidence            359999998765555455667789999999999999999999986                4578999999985 77777


Q ss_pred             hcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccC----CCCccccccccC
Q 012062           88 ADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYD----HNNTLTNRVITL  163 (472)
Q Consensus        88 ~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~----~~~~~~~~~gt~  163 (472)
                      +......+++.+++.++.||+.||+|||+++|+||||||+||||+ ++.+||+|||+++.....    .........+|.
T Consensus       120 l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~  198 (319)
T 2y4i_B          120 VRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWL  198 (319)
T ss_dssp             TTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGG
T ss_pred             HHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcc
Confidence            776666799999999999999999999999999999999999998 678999999998654321    112233346799


Q ss_pred             CCCChhhhcC--------CCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCcccc
Q 012062          164 WYRPPELLLG--------ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNH  235 (472)
Q Consensus       164 ~y~aPE~l~~--------~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  235 (472)
                      .|+|||++..        ...++.++|||||||++|+|++|+.||...+.......+.........              
T Consensus       199 ~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------  264 (319)
T 2y4i_B          199 CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLS--------------  264 (319)
T ss_dssp             GTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCC--------------
T ss_pred             cccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCC--------------
Confidence            9999999874        234788999999999999999999999998887777666443211100              


Q ss_pred             CCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          236 FKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                                    ...++.++.+||.+||..||++|||+.++++.
T Consensus       265 --------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~  296 (319)
T 2y4i_B          265 --------------QIGMGKEISDILLFCWAFEQEERPTFTKLMDM  296 (319)
T ss_dssp             --------------CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHH
T ss_pred             --------------cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence                          01245578999999999999999999999863


No 230
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=7.6e-39  Score=316.09  Aligned_cols=238  Identities=22%  Similarity=0.332  Sum_probs=181.9

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||++.....  .....+.+|++++++++|+||+++++++.....            ....+||||||+
T Consensus        47 ~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------------~~~~~~lv~e~~  112 (317)
T 2buj_A           47 LVEGLHDGHFYALKRILCHEQ--QDREEAQREADMHRLFNHPNILRLVAYCLRERG------------AKHEAWLLLPFF  112 (317)
T ss_dssp             EEEETTTCCEEEEEEEEESSH--HHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEET------------TEEEEEEEEECC
T ss_pred             EEEecCCCcEEEEEEEecCCH--HHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccC------------CCceeEEEEEeC
Confidence            367889999999999975432  235567899999999999999999999874210            145789999999


Q ss_pred             CC-ChhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC--
Q 012062           81 DH-DLTGLADR---PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN--  154 (472)
Q Consensus        81 ~g-~l~~~~~~---~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~--  154 (472)
                      .+ +|.+++.+   ....+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||++.........  
T Consensus       113 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~  192 (317)
T 2buj_A          113 KRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSR  192 (317)
T ss_dssp             TTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHH
T ss_pred             CCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhccccccccc
Confidence            96 77666654   3457999999999999999999999999999999999999999999999999998764321111  


Q ss_pred             ------ccccccccCCCCChhhhcCCC--CCCCCcchhhHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhcCCCCCCCC
Q 012062          155 ------TLTNRVITLWYRPPELLLGAT--KYGPAVDMWSVGCIFAELLNGKPILPGKNE--AEQLSKIFELCGSPDETIW  224 (472)
Q Consensus       155 ------~~~~~~gt~~y~aPE~l~~~~--~~~~~~DiwSlG~il~ell~G~~pf~~~~~--~~~~~~i~~~~~~~~~~~~  224 (472)
                            ......+|..|+|||++.+..  .++.++||||||||+|+|++|+.||.....  ......+.... ..     
T Consensus       193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~-----  266 (317)
T 2buj_A          193 QALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQL-SI-----  266 (317)
T ss_dssp             HHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC---C-----
T ss_pred             ccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccC-CC-----
Confidence                  112235699999999987532  268899999999999999999999953211  01111111100 00     


Q ss_pred             ccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          225 PGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                      +                       ....++..+.+||.+||..||.+|||+.|++++
T Consensus       267 ~-----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          267 P-----------------------QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             C-----------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             C-----------------------ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            0                       012467789999999999999999999999975


No 231
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=2.3e-38  Score=329.10  Aligned_cols=227  Identities=25%  Similarity=0.416  Sum_probs=179.9

Q ss_pred             CCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Chhh
Q 012062            8 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTG   86 (472)
Q Consensus         8 g~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l~~   86 (472)
                      +..||||+++....   ....+.+|+++|++|+|+||+++++++..                 +.+||||||+.+ +|.+
T Consensus       208 ~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----------------~~~~iv~e~~~~gsL~~  267 (452)
T 1fmk_A          208 TTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-----------------EPIYIVTEYMSKGSLLD  267 (452)
T ss_dssp             TEEEEEEECCTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-----------------SSCEEEECCCTTCBHHH
T ss_pred             CceEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-----------------CceEEEehhhcCCCHHH
Confidence            46799999986432   24578899999999999999999999853                 357999999985 7777


Q ss_pred             hhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccccccCCC
Q 012062           87 LADR-PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWY  165 (472)
Q Consensus        87 ~~~~-~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y  165 (472)
                      ++.. ....+++.++..++.||+.||+|||+++|+||||||+||||+.++.+||+|||+++..............+|..|
T Consensus       268 ~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y  347 (452)
T 1fmk_A          268 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW  347 (452)
T ss_dssp             HHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGG
T ss_pred             HHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccc
Confidence            7754 223589999999999999999999999999999999999999999999999999987654333333334567889


Q ss_pred             CChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhhhh
Q 012062          166 RPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKR  244 (472)
Q Consensus       166 ~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (472)
                      +|||++.. ..++.++|||||||+||+|++ |+.||.+.+..+.+..+......+.                        
T Consensus       348 ~aPE~~~~-~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~------------------------  402 (452)
T 1fmk_A          348 TAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC------------------------  402 (452)
T ss_dssp             SCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC------------------------
T ss_pred             cCHhHHhc-CCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC------------------------
Confidence            99999986 568999999999999999999 9999999988887777654321110                        


Q ss_pred             hHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC--CCC
Q 012062          245 RVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS--EYF  284 (472)
Q Consensus       245 ~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h--~~f  284 (472)
                           ...+++.+.+||.+||..||++|||+++|++.  .+|
T Consensus       403 -----~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~  439 (452)
T 1fmk_A          403 -----PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  439 (452)
T ss_dssp             -----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             -----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence                 12467789999999999999999999999863  454


No 232
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=1.5e-38  Score=309.82  Aligned_cols=225  Identities=23%  Similarity=0.331  Sum_probs=178.6

Q ss_pred             EEEEEEeecCCc-CCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Chhhh
Q 012062           10 IVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGL   87 (472)
Q Consensus        10 ~vAlK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l~~~   87 (472)
                      .||||+++.... .......+.+|++++++++|+||+++++++..                 ..+++||||+.+ +|.++
T Consensus        48 ~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----------------~~~~~v~e~~~~~~L~~~  110 (291)
T 1u46_A           48 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-----------------PPMKMVTELAPLGSLLDR  110 (291)
T ss_dssp             EEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----------------SSCEEEEECCTTCBHHHH
T ss_pred             EEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc-----------------CCceeeEecccCCCHHHH
Confidence            689999986532 23345678899999999999999999999975                 137899999984 77777


Q ss_pred             hcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC--ccccccccCCC
Q 012062           88 ADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN--TLTNRVITLWY  165 (472)
Q Consensus        88 ~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~--~~~~~~gt~~y  165 (472)
                      +......+++.+++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++.........  ......+|..|
T Consensus       111 l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y  190 (291)
T 1u46_A          111 LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW  190 (291)
T ss_dssp             HHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGG
T ss_pred             HHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCcee
Confidence            7665556999999999999999999999999999999999999999999999999999876543221  12234567889


Q ss_pred             CChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhhhh
Q 012062          166 RPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKR  244 (472)
Q Consensus       166 ~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (472)
                      +|||++.+ ..++.++|||||||++|+|++ |+.||.+.+..+.+..+.........                       
T Consensus       191 ~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------------------  246 (291)
T 1u46_A          191 CAPESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR-----------------------  246 (291)
T ss_dssp             CCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC-----------------------
T ss_pred             eCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCC-----------------------
Confidence            99999976 567889999999999999999 99999999888877776543211110                       


Q ss_pred             hHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          245 RVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       245 ~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                           ...++..+.+||.+||..||++|||+.++++
T Consensus       247 -----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          247 -----PEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             -----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----CcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                 1246778999999999999999999999986


No 233
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=5.3e-38  Score=307.35  Aligned_cols=234  Identities=23%  Similarity=0.292  Sum_probs=175.4

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHh--cCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKK--LQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-   82 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~--l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-   82 (472)
                      .+++.||||+++...     .....+|.+++..  ++|+||+++++++....            .....+||||||+++ 
T Consensus        29 ~~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~------------~~~~~~~lv~e~~~~g   91 (301)
T 3q4u_A           29 WQGENVAVKIFSSRD-----EKSWFRETELYNTVMLRHENILGFIASDMTSR------------HSSTQLWLITHYHEMG   91 (301)
T ss_dssp             ETTEEEEEEEECGGG-----HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE------------TTEEEEEEEECCCTTC
T ss_pred             ECCEEEEEEEecccc-----chhhHHHHHHHHHhhccCcCeeeEEEeecccc------------CCCceeEEehhhccCC
Confidence            478999999987532     3455677777777  79999999999876421            114568999999986 


Q ss_pred             ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC
Q 012062           83 DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCH--------VNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN  154 (472)
Q Consensus        83 ~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH--------~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~  154 (472)
                      +|.+++..  ..+++..++.|+.||+.||+|||        +++|+||||||+||||+.++.+||+|||+++........
T Consensus        92 ~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  169 (301)
T 3q4u_A           92 SLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ  169 (301)
T ss_dssp             BHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE
T ss_pred             CHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccc
Confidence            77777744  35899999999999999999999        999999999999999999999999999999876543322


Q ss_pred             ---ccccccccCCCCChhhhcCCC-----CCCCCcchhhHHHHHHHHHhC----------CCCCCCCC----hHHHHHHH
Q 012062          155 ---TLTNRVITLWYRPPELLLGAT-----KYGPAVDMWSVGCIFAELLNG----------KPILPGKN----EAEQLSKI  212 (472)
Q Consensus       155 ---~~~~~~gt~~y~aPE~l~~~~-----~~~~~~DiwSlG~il~ell~G----------~~pf~~~~----~~~~~~~i  212 (472)
                         .....++|+.|+|||++.+..     .++.++|||||||++|+|++|          ..||....    ....+..+
T Consensus       170 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~  249 (301)
T 3q4u_A          170 LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKV  249 (301)
T ss_dssp             EECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHH
T ss_pred             ccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHH
Confidence               123347899999999997642     234689999999999999999          88886532    22333333


Q ss_pred             HHhcCCCCCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          213 FELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                      .........        .+              .......++..+.+||++||..||++|||+.||++
T Consensus       250 ~~~~~~~~~--------~~--------------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          250 VCVDQQRPN--------IP--------------NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             HTTSCCCCC--------CC--------------GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             HhccCCCCC--------CC--------------hhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            221111100        00              00011235678999999999999999999999985


No 234
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=2.8e-38  Score=310.60  Aligned_cols=243  Identities=25%  Similarity=0.313  Sum_probs=184.0

Q ss_pred             cCCCEEEEEEeecCC--cCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-
Q 012062            6 KTGEIVALKKIRMDN--EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-   82 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~--~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-   82 (472)
                      .+++.||||++....  ..+.....+.+|++++++++|+||+++++++..                .+.+||||||+.+ 
T Consensus        52 ~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~~~~  115 (307)
T 2nru_A           52 VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD----------------GDDLCLVYVYMPNG  115 (307)
T ss_dssp             SSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECS----------------SSSCEEEEECCTTC
T ss_pred             ECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEec----------------CCceEEEEEecCCC
Confidence            478899999997543  233455678899999999999999999999976                4578999999975 


Q ss_pred             ChhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC-ccccc
Q 012062           83 DLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN-TLTNR  159 (472)
Q Consensus        83 ~l~~~~~~--~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~-~~~~~  159 (472)
                      +|.+++..  ....+++..++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||++......... .....
T Consensus       116 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  195 (307)
T 2nru_A          116 SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRI  195 (307)
T ss_dssp             BHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSC
T ss_pred             cHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeeccccccccccccccccccc
Confidence            67666653  2345899999999999999999999999999999999999999999999999999876543222 22334


Q ss_pred             cccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCc
Q 012062          160 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS  239 (472)
Q Consensus       160 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (472)
                      .+|..|+|||++.+  .++.++|||||||++|+|++|..||...+....+..+.+...............          
T Consensus       196 ~g~~~y~aPE~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------  263 (307)
T 2nru_A          196 VGTTAYMAPEALRG--EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDK----------  263 (307)
T ss_dssp             CSCGGGCCHHHHTT--EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCS----------
T ss_pred             CCCcCcCChHHhcC--CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccc----------
Confidence            68999999999875  478999999999999999999999987655433333322211110000000000          


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                           .........+..+.+||.+||..||++|||+.+++++
T Consensus       264 -----~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          264 -----KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             -----SCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             -----cccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                 0000112356779999999999999999999999863


No 235
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=2.1e-38  Score=336.04  Aligned_cols=227  Identities=25%  Similarity=0.415  Sum_probs=184.7

Q ss_pred             CCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Chhh
Q 012062            8 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTG   86 (472)
Q Consensus         8 g~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l~~   86 (472)
                      +..||||+++....   ..+.+++|+++|++|+|+|||++++++..                 +.+|||||||.+ +|.+
T Consensus       291 ~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----------------~~~~lv~e~~~~gsL~~  350 (535)
T 2h8h_A          291 TTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-----------------EPIYIVTEYMSKGSLLD  350 (535)
T ss_dssp             TEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-----------------SSCEEEECCCTTEEHHH
T ss_pred             CceEEEEEeCCCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEee-----------------ccceEeeehhcCCcHHH
Confidence            46799999986532   24578899999999999999999999853                 357999999986 7777


Q ss_pred             hhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccccccCCC
Q 012062           87 LADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWY  165 (472)
Q Consensus        87 ~~~~~-~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y  165 (472)
                      ++... ...+++.+++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.+............++..|
T Consensus       351 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y  430 (535)
T 2h8h_A          351 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW  430 (535)
T ss_dssp             HHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGG
T ss_pred             HHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccc
Confidence            77542 23589999999999999999999999999999999999999999999999999976543221222233457889


Q ss_pred             CChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhhhh
Q 012062          166 RPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKR  244 (472)
Q Consensus       166 ~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (472)
                      +|||++.. ..++.++||||||||||||++ |+.||.+.+..+.+..+......+.                        
T Consensus       431 ~aPE~~~~-~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~------------------------  485 (535)
T 2h8h_A          431 TAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC------------------------  485 (535)
T ss_dssp             SCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCC------------------------
T ss_pred             cCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC------------------------
Confidence            99999986 568999999999999999999 9999999988887777654321110                        


Q ss_pred             hHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC--CCC
Q 012062          245 RVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS--EYF  284 (472)
Q Consensus       245 ~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h--~~f  284 (472)
                           ...++..+.+||.+||..||++|||+++|++.  .+|
T Consensus       486 -----~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~  522 (535)
T 2h8h_A          486 -----PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  522 (535)
T ss_dssp             -----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             -----CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence                 12467789999999999999999999999864  444


No 236
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=1.1e-38  Score=327.73  Aligned_cols=245  Identities=16%  Similarity=0.173  Sum_probs=178.5

Q ss_pred             CceeccCCCEEEEEEeecCC-cCCCchhhHHHHHHHHHhcCC-CC---------ccceeEEeeCCCCCCCCCC-CCCCCC
Q 012062            1 MAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKLQH-EN---------VIKLKEIVTSPGPERDEQG-RPDGNK   68 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~-~~~~~~~~~~~Ei~il~~l~h-pn---------Iv~l~~~~~~~~~~~~~~~-~~~~~~   68 (472)
                      +|++..+|+.||||+++... ........+.+|+.+++.|+| .|         ++...++....+....... ......
T Consensus        96 ~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (413)
T 3dzo_A           96 EATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDM  175 (413)
T ss_dssp             EEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC--------------
T ss_pred             EEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCccccccCCCccc
Confidence            47889999999999998543 223345678899999999987 32         2222233322111000000 000001


Q ss_pred             cCCeEEEEEecCCCChhhhhc------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeec
Q 012062           69 YRGSTYMVFEYMDHDLTGLAD------RPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADF  142 (472)
Q Consensus        69 ~~~~~~iVmEy~~g~l~~~~~------~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DF  142 (472)
                      ....++++|+++.++|.+++.      .....+++..++.|+.||+.||+|||+++|+||||||+||||+.++.+||+||
T Consensus       176 ~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DF  255 (413)
T 3dzo_A          176 WVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGF  255 (413)
T ss_dssp             -CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCG
T ss_pred             cccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEec
Confidence            123578999999999888773      33445778889999999999999999999999999999999999999999999


Q ss_pred             cceeeeccCCCCccccccccCCCCChhhhc---------CCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 012062          143 GLARSFSYDHNNTLTNRVITLWYRPPELLL---------GATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIF  213 (472)
Q Consensus       143 G~a~~~~~~~~~~~~~~~gt~~y~aPE~l~---------~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~  213 (472)
                      |+++.....    ....++ +.|+|||++.         ....++.++||||||||||+|++|+.||...+..+....++
T Consensus       256 G~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~  330 (413)
T 3dzo_A          256 EHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIF  330 (413)
T ss_dssp             GGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGG
T ss_pred             cceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHH
Confidence            998765432    344567 9999999983         23457889999999999999999999998765432211111


Q ss_pred             HhcCCCCCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCC
Q 012062          214 ELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF  284 (472)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f  284 (472)
                      .                                  ....+++.+++||.+||..||++|||+.|+|+|+||
T Consensus       331 ~----------------------------------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~  367 (413)
T 3dzo_A          331 R----------------------------------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEY  367 (413)
T ss_dssp             S----------------------------------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHH
T ss_pred             h----------------------------------hcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHH
Confidence            0                                  012467789999999999999999999999999999


No 237
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=3e-38  Score=309.86  Aligned_cols=222  Identities=23%  Similarity=0.351  Sum_probs=170.3

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHH-HhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKIL-KKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il-~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||+++.       ...+.+|+.++ +.++|+||+++++++....            .....+||||||
T Consensus        36 ~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~------------~~~~~~~lv~e~   96 (299)
T 3m2w_A           36 QIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLY------------AGRKCLLIVMEC   96 (299)
T ss_dssp             EEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE------------TTEEEEEEEECC
T ss_pred             EEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchhHHhhhhhhc------------CCCceEEEEEee
Confidence            367889999999999963       23567899988 6668999999999987411            014578999999


Q ss_pred             CCC-ChhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcC---CCCeEEeeccceeeeccCCCC
Q 012062           80 MDH-DLTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN---EGNLKLADFGLARSFSYDHNN  154 (472)
Q Consensus        80 ~~g-~l~~~~~~~-~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~---~~~vkL~DFG~a~~~~~~~~~  154 (472)
                      +++ +|.+++... ...+++.+++.|+.||+.||+|||+++|+||||||+||||+.   ++.+||+|||++....     
T Consensus        97 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-----  171 (299)
T 3m2w_A           97 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-----  171 (299)
T ss_dssp             CCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-----
T ss_pred             cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc-----
Confidence            986 777777653 346999999999999999999999999999999999999998   7789999999986432     


Q ss_pred             ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccc
Q 012062          155 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYN  234 (472)
Q Consensus       155 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  234 (472)
                                         ...++.++|||||||++|+|++|+.||...+.......+..       ..    .    ..
T Consensus       172 -------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~-------~~----~----~~  217 (299)
T 3m2w_A          172 -------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT-------RI----R----MG  217 (299)
T ss_dssp             -------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCC-------SS----C----TT
T ss_pred             -------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHH-------HH----h----hc
Confidence                               13467889999999999999999999987654332111100       00    0    00


Q ss_pred             cCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCCCC
Q 012062          235 HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD  287 (472)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~~~  287 (472)
                      .       .......+..++.++++||.+||..||++|||+.|+|+|+||...
T Consensus       218 ~-------~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~  263 (299)
T 3m2w_A          218 Q-------YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  263 (299)
T ss_dssp             C-------CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTG
T ss_pred             c-------ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhccc
Confidence            0       001122345688999999999999999999999999999999653


No 238
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=5.9e-38  Score=304.08  Aligned_cols=222  Identities=22%  Similarity=0.355  Sum_probs=174.3

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Ch
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DL   84 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l   84 (472)
                      .+++.||||+++.+.    ....+.+|++++++++|+||+++++++...               .+.+||||||+++ +|
T Consensus        42 ~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---------------~~~~~lv~e~~~~~~L  102 (278)
T 1byg_A           42 YRGNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE---------------KGGLYIVTEYMAKGSL  102 (278)
T ss_dssp             ETTEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC-----------------CCEEEECCCTTEEH
T ss_pred             EcCCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcC---------------CCceEEEEecCCCCCH
Confidence            368899999997543    345788999999999999999999997542               3468999999986 77


Q ss_pred             hhhhcCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccccccC
Q 012062           85 TGLADRPGL-RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITL  163 (472)
Q Consensus        85 ~~~~~~~~~-~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~  163 (472)
                      .+++.+... .+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++......    .....++.
T Consensus       103 ~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----~~~~~~~~  178 (278)
T 1byg_A          103 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QDTGKLPV  178 (278)
T ss_dssp             HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC----------------CCT
T ss_pred             HHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccccccccc----ccCCCccc
Confidence            777654321 2789999999999999999999999999999999999999999999999998765432    12235688


Q ss_pred             CCCChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhh
Q 012062          164 WYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTM  242 (472)
Q Consensus       164 ~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (472)
                      .|+|||++.+ ..++.++|||||||++|+|++ |+.||...+..+....+.......                       
T Consensus       179 ~y~aPE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------  234 (278)
T 1byg_A          179 KWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD-----------------------  234 (278)
T ss_dssp             TTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCC-----------------------
T ss_pred             cccCHHHhCC-CCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCC-----------------------
Confidence            9999999976 568899999999999999998 999999887766665553211000                       


Q ss_pred             hhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          243 KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       243 ~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                            ....++..+.+||++||..||++|||+.|+++
T Consensus       235 ------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          235 ------APDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             ------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------CcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence                  01246778999999999999999999999985


No 239
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=2.9e-38  Score=338.75  Aligned_cols=265  Identities=23%  Similarity=0.292  Sum_probs=190.9

Q ss_pred             CceeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            1 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      +|++..+++.||||+++.... ......+.+|+++|++++||||+++++++.....          ....+.+|||||||
T Consensus        32 la~~~~tg~~VAVKvi~~~~~-~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~----------~~~~~~~~LVmEy~  100 (676)
T 3qa8_A           32 RWIHQDTGEQVAIKQCRQELS-PKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQK----------LAPNDLPLLAMEYC  100 (676)
T ss_dssp             CCCCTTTTCCEEECCCCSCCC-HHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCC----------CCTTSSCCCEEECC
T ss_pred             EEEECCCCcEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCCCCceeeeeccccc----------ccCCCeEEEEEEeC
Confidence            477889999999999976432 2234567899999999999999999999865221          11145679999999


Q ss_pred             CC-ChhhhhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCC---eEEeeccceeeeccCCCC
Q 012062           81 DH-DLTGLADRPG--LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADFGLARSFSYDHNN  154 (472)
Q Consensus        81 ~g-~l~~~~~~~~--~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~---vkL~DFG~a~~~~~~~~~  154 (472)
                      ++ +|.+++....  ..+++..++.|+.||+.||+|||++||+||||||+||||+.++.   +||+|||++......  .
T Consensus       101 ~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~--~  178 (676)
T 3qa8_A          101 EGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG--E  178 (676)
T ss_dssp             SSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSC--C
T ss_pred             CCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccccccc--c
Confidence            75 7777766532  25889999999999999999999999999999999999997765   999999999865432  2


Q ss_pred             ccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccc
Q 012062          155 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYN  234 (472)
Q Consensus       155 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  234 (472)
                      ......+|..|+|||++.+ ..++.++|||||||++|+|++|..||........+..............+........+.
T Consensus       179 ~~~~~~gt~~Y~APE~l~~-~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~  257 (676)
T 3qa8_A          179 LCTEFVGTLQYLAPELLEQ-KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFS  257 (676)
T ss_dssp             CCCCCCSCCTTCSSCSSCC-SCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCC
T ss_pred             ccccccCCcccCChHHhcc-CCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccc
Confidence            3344678999999999876 678999999999999999999999998765543322111111111001111110000000


Q ss_pred             cCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCCC
Q 012062          235 HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFW  285 (472)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f~  285 (472)
                      ...+      ........++..+.+||++||..||++|||+.|+|+|+||.
T Consensus       258 ~~lp------~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~  302 (676)
T 3qa8_A          258 SVLP------TPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQ  302 (676)
T ss_dssp             SSSC------CSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHH
T ss_pred             cccC------CchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHH
Confidence            0000      01112335778899999999999999999999999999983


No 240
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=6.1e-38  Score=311.47  Aligned_cols=235  Identities=26%  Similarity=0.389  Sum_probs=180.6

Q ss_pred             eccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-
Q 012062            4 EIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-   82 (472)
Q Consensus         4 ~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-   82 (472)
                      +..+++.||||+++...  ......+.+|++++++++|+||+++++++...+              ...+||||||+++ 
T Consensus        66 ~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--------------~~~~~lv~e~~~~~  129 (326)
T 2w1i_A           66 QDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG--------------RRNLKLIMEYLPYG  129 (326)
T ss_dssp             SSSCCEEEEEEEESSCC--SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------------------CCEEEECCCTTC
T ss_pred             cCCCceEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC--------------CCceEEEEECCCCC
Confidence            56789999999997542  234567889999999999999999999987532              3468999999985 


Q ss_pred             ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC--cccccc
Q 012062           83 DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN--TLTNRV  160 (472)
Q Consensus        83 ~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~--~~~~~~  160 (472)
                      +|.+++......+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||++.........  ......
T Consensus       130 ~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~  209 (326)
T 2w1i_A          130 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGE  209 (326)
T ss_dssp             BHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCS
T ss_pred             CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCC
Confidence            788877766567999999999999999999999999999999999999999999999999999876543221  122334


Q ss_pred             ccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChH------------HHHHHHHHhcCCCCCCCCccCC
Q 012062          161 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEA------------EQLSKIFELCGSPDETIWPGVS  228 (472)
Q Consensus       161 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~------------~~~~~i~~~~~~~~~~~~~~~~  228 (472)
                      ++..|+|||++.+ ..++.++|||||||++|+|++|..||......            .....+.+.......       
T Consensus       210 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  281 (326)
T 2w1i_A          210 SPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR-------  281 (326)
T ss_dssp             CCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCC-------
T ss_pred             CceeEECchhhcC-CCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCC-------
Confidence            5778999999976 46788999999999999999999887643110            000011110000000       


Q ss_pred             CCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          229 KMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                        ......++.++.+||++||..||++|||+.||++
T Consensus       282 ------------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          282 ------------------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             ------------------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ------------------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                              0011246788999999999999999999999985


No 241
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=3.2e-37  Score=303.98  Aligned_cols=219  Identities=24%  Similarity=0.374  Sum_probs=169.0

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Ch
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DL   84 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l   84 (472)
                      .+++.||||+++...    ....+.+|+++|++++||||+++++++.+                  .+||||||+++ +|
T Consensus        29 ~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------------------~~~lv~e~~~~~~L   86 (307)
T 2eva_A           29 WRAKDVAIKQIESES----ERKAFIVELRQLSRVNHPNIVKLYGACLN------------------PVCLVMEYAEGGSL   86 (307)
T ss_dssp             ETTEEEEEEECSSTT----HHHHHHHHHHHHHHCCCTTBCCEEEBCTT------------------TTEEEEECCTTCBH
T ss_pred             ECCeeEEEEEecChh----HHHHHHHHHHHHhcCCCCCcCeEEEEEcC------------------CcEEEEEcCCCCCH
Confidence            357899999986432    34578899999999999999999998753                  36999999985 77


Q ss_pred             hhhhcCCCC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCCCcEEEcCCCC-eEEeeccceeeeccCCCCcccc
Q 012062           85 TGLADRPGL--RFTVPQIKCYMKQLLTGLHYCHV---NQVLHRDIKGSNLLIDNEGN-LKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        85 ~~~~~~~~~--~l~~~~i~~i~~Qll~aL~~LH~---~giiHrDLKp~NILl~~~~~-vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      .+++.....  .+++..++.++.||+.||+|||+   ++|+||||||+||||+.++. +||+|||++......    ...
T Consensus        87 ~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~----~~~  162 (307)
T 2eva_A           87 YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----MTN  162 (307)
T ss_dssp             HHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------------
T ss_pred             HHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc----ccc
Confidence            777665332  47899999999999999999999   89999999999999998887 799999999765322    233


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChH--HHHHHHHHhcCCCCCCCCccCCCCCccccC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEA--EQLSKIFELCGSPDETIWPGVSKMPAYNHF  236 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  236 (472)
                      ..+|..|+|||++.+ ..++.++|||||||++|+|++|+.||......  .....+...  ...                
T Consensus       163 ~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~----------------  223 (307)
T 2eva_A          163 NKGSAAWMAPEVFEG-SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG--TRP----------------  223 (307)
T ss_dssp             --CCTTSSCHHHHTC-CCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTT--CCC----------------
T ss_pred             CCCCCceEChhhhCC-CCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcC--CCC----------------
Confidence            468999999999986 57899999999999999999999999865432  222222111  000                


Q ss_pred             CCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          237 KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                                 .....++..+.+||.+||..||++|||+.|+++
T Consensus       224 -----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  256 (307)
T 2eva_A          224 -----------PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK  256 (307)
T ss_dssp             -----------CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------CcccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                       011246778999999999999999999999986


No 242
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=2.4e-37  Score=308.51  Aligned_cols=243  Identities=17%  Similarity=0.135  Sum_probs=174.5

Q ss_pred             ceeccCCCEEEEEEeecCCc------CCCchhhHHHHHHHHHhcC---------CCCccceeEEeeCCCCC---------
Q 012062            2 AREIKTGEIVALKKIRMDNE------KEGFPITAIREIKILKKLQ---------HENVIKLKEIVTSPGPE---------   57 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~------~~~~~~~~~~Ei~il~~l~---------hpnIv~l~~~~~~~~~~---------   57 (472)
                      |++  +++.||||+++....      .......+.+|+.+|+.|+         |+|||++++++...+..         
T Consensus        39 ~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~  116 (336)
T 2vuw_A           39 TIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWD  116 (336)
T ss_dssp             EEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHH
T ss_pred             EEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHHHHH
Confidence            444  789999999987642      2233467889999999986         66666666654321000         


Q ss_pred             ------CCCCCCCCCCCcCCeEEEEEecCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCCCcE
Q 012062           58 ------RDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCH-VNQVLHRDIKGSNL  129 (472)
Q Consensus        58 ------~~~~~~~~~~~~~~~~~iVmEy~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH-~~giiHrDLKp~NI  129 (472)
                            ...... ......+.+|||||||.+ ++++.+.+  ..+++.+++.|++||+.||+||| +++|+||||||+||
T Consensus       117 ~~~~~~~~~~~~-~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NI  193 (336)
T 2vuw_A          117 HYNSTKGSANDR-PDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNV  193 (336)
T ss_dssp             HHHHHTCCSSCC-SCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGE
T ss_pred             HHhhhccccccC-ccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHE
Confidence                  000000 001115689999999986 46666654  35899999999999999999999 99999999999999


Q ss_pred             EEcCCC--------------------CeEEeeccceeeeccCCCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHH
Q 012062          130 LIDNEG--------------------NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCI  189 (472)
Q Consensus       130 Ll~~~~--------------------~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~i  189 (472)
                      ||+.++                    .+||+|||+|+.....      ..++|+.|+|||++.+. . +.++|||||+++
T Consensus       194 Ll~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aPE~~~g~-~-~~~~Diwsl~~~  265 (336)
T 2vuw_A          194 LLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDEDLFTGD-G-DYQFDIYRLMKK  265 (336)
T ss_dssp             EEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCSGGGCCC-S-SHHHHHHHHHHH
T ss_pred             EEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccChhhhcCC-C-ccceehhhhhCC
Confidence            999887                    8999999999876532      34789999999999874 3 789999998777


Q ss_pred             -HHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhcc
Q 012062          190 -FAELLNGKPILPGKNE-AEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLML  267 (472)
Q Consensus       190 -l~ell~G~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~  267 (472)
                       ++++++|..||..... ......+........                       ......+..+++++++||++||+.
T Consensus       266 ~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~s~~~~dli~~~L~~  322 (336)
T 2vuw_A          266 ENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKT-----------------------KCNTPAMKQIKRKIQEFHRTMLNF  322 (336)
T ss_dssp             HHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSS-----------------------CCCSHHHHHHHHHHHHHHHHGGGS
T ss_pred             CCcccccccCCCcchhhhhHHHHhhhhhhccCc-----------------------ccchhhhhhcCHHHHHHHHHHhcc
Confidence             7778889988854221 112223322111000                       001124456888999999999998


Q ss_pred             CCCCCCCHHHHh-cCCCCC
Q 012062          268 DPSQRISAKDAL-DSEYFW  285 (472)
Q Consensus       268 dP~~R~t~~elL-~h~~f~  285 (472)
                      |     |++|+| +||||+
T Consensus       323 d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          323 S-----SATDLLCQHSLFK  336 (336)
T ss_dssp             S-----SHHHHHHHCGGGC
T ss_pred             C-----CHHHHHhcCCCcC
Confidence            8     999999 999983


No 243
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=1.6e-37  Score=313.35  Aligned_cols=222  Identities=17%  Similarity=0.206  Sum_probs=172.6

Q ss_pred             eeccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcC---CCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            3 REIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ---HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         3 ~~~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~---hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      ++..+++.||||+++...     ...+.+|+++++.|+   |+||+++++++..                .+.+||||||
T Consensus        90 ~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~----------------~~~~~lv~e~  148 (365)
T 3e7e_A           90 NDAKNKQKFVLKVQKPAN-----PWEFYIGTQLMERLKPSMQHMFMKFYSAHLF----------------QNGSVLVGEL  148 (365)
T ss_dssp             ----CCCCEEEEEESSCC-----HHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC----------------SSCEEEEECC
T ss_pred             cccccCcEEEEEEeCCCC-----hhHHHHHHHHHHHhhhhhhhhhhhhheeeec----------------CCCcEEEEec
Confidence            467899999999997542     446778888888887   9999999999987                5678999999


Q ss_pred             CCC-ChhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcC-----------CCCeEEeecc
Q 012062           80 MDH-DLTGLADR----PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN-----------EGNLKLADFG  143 (472)
Q Consensus        80 ~~g-~l~~~~~~----~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~-----------~~~vkL~DFG  143 (472)
                      |++ +|.+++..    ....+++.+++.|+.||+.||+|||+++|+||||||+||||+.           ++.+||+|||
T Consensus       149 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG  228 (365)
T 3e7e_A          149 YSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLG  228 (365)
T ss_dssp             CCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCT
T ss_pred             cCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCc
Confidence            985 77776653    3456999999999999999999999999999999999999998           8899999999


Q ss_pred             ceeeeccC-CCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCC
Q 012062          144 LARSFSYD-HNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDET  222 (472)
Q Consensus       144 ~a~~~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~  222 (472)
                      +|+.+... ........+||..|+|||++.+ ..++.++||||||||+|+|++|+.||...+...               
T Consensus       229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---------------  292 (365)
T 3e7e_A          229 QSIDMKLFPKGTIFTAKCETSGFQCVEMLSN-KPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE---------------  292 (365)
T ss_dssp             TCEEGGGSCTTEEECCSSCTTSCCCHHHHTT-CCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE---------------
T ss_pred             hhhhhhccCCCceeeeecCCCCCCChHHhcC-CCCCccccHHHHHHHHHHHHhCCCccccCCCCc---------------
Confidence            99765422 2334455678999999999987 568999999999999999999999986543210               


Q ss_pred             CCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          223 IWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                       |.....+..   .               ..++.+.+|+.+||..+|.+|++..+.|.
T Consensus       293 -~~~~~~~~~---~---------------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~  331 (365)
T 3e7e_A          293 -CKPEGLFRR---L---------------PHLDMWNEFFHVMLNIPDCHHLPSLDLLR  331 (365)
T ss_dssp             -EEECSCCTT---C---------------SSHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred             -eeechhccc---c---------------CcHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence             000000000   0               13456889999999999999975544443


No 244
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=4.8e-37  Score=332.80  Aligned_cols=226  Identities=21%  Similarity=0.342  Sum_probs=182.6

Q ss_pred             CCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-Chh
Q 012062            7 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLT   85 (472)
Q Consensus         7 tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-~l~   85 (472)
                      ++..||||+++.... ......+.+|+.+|++++||||+++++++..                 +.+||||||+++ +|.
T Consensus       417 ~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-----------------~~~~lv~E~~~~g~L~  478 (656)
T 2j0j_A          417 PAMAVAIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVKLIGVITE-----------------NPVWIIMELCTLGELR  478 (656)
T ss_dssp             CCEEEEEEECSSTTC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----------------SSCEEEEECCTTCBHH
T ss_pred             ccEEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-----------------CceEEEEEcCCCCcHH
Confidence            356799999875432 2244678899999999999999999999853                 357999999984 777


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccccccCCC
Q 012062           86 GLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWY  165 (472)
Q Consensus        86 ~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y  165 (472)
                      +++......+++..++.|+.||+.||+|||+++|+||||||+||||+.++.+||+|||+++..............+|+.|
T Consensus       479 ~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y  558 (656)
T 2j0j_A          479 SFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW  558 (656)
T ss_dssp             HHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGG
T ss_pred             HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcce
Confidence            77766656799999999999999999999999999999999999999999999999999987654333333334567899


Q ss_pred             CChhhhcCCCCCCCCcchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhhhh
Q 012062          166 RPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKR  244 (472)
Q Consensus       166 ~aPE~l~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (472)
                      +|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+.+..+......+.                        
T Consensus       559 ~aPE~~~~-~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~------------------------  613 (656)
T 2j0j_A          559 MAPESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM------------------------  613 (656)
T ss_dssp             CCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCC------------------------
T ss_pred             eCHHHhcC-CCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCC------------------------
Confidence            99999976 578999999999999999997 9999999998888777755321110                        


Q ss_pred             hHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          245 RVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       245 ~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                           ...++..+.+||.+||..||++|||+.||++
T Consensus       614 -----~~~~~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          614 -----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             -----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----CccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                 1246778999999999999999999999985


No 245
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.4e-36  Score=301.99  Aligned_cols=234  Identities=24%  Similarity=0.304  Sum_probs=170.9

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhc--CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKL--QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-   82 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l--~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-   82 (472)
                      .+++.||||++....     .....+|.+++..+  +|+||+++++++.....            ....+||||||+++ 
T Consensus        58 ~~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~------------~~~~~~lv~e~~~~g  120 (337)
T 3mdy_A           58 WRGEKVAVKVFFTTE-----EASWFRETEIYQTVLMRHENILGFIAADIKGTG------------SWTQLYLITDYHENG  120 (337)
T ss_dssp             ETTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG------------GGCEEEEEECCCTTC
T ss_pred             ECCceEEEEEEeccc-----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC------------CCCceEEEEeccCCC
Confidence            358999999996432     23445666666655  89999999999886321            12578999999986 


Q ss_pred             ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC
Q 012062           83 DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN--------QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN  154 (472)
Q Consensus        83 ~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~--------giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~  154 (472)
                      +|.+++...  .+++..++.++.||+.||+|||++        +|+||||||+||||+.++.+||+|||+++.+......
T Consensus       121 ~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  198 (337)
T 3mdy_A          121 SLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE  198 (337)
T ss_dssp             BHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             cHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeecccccc
Confidence            777777543  589999999999999999999999        9999999999999999999999999999776433222


Q ss_pred             ---ccccccccCCCCChhhhcCCCCCCCC------cchhhHHHHHHHHHhC----------CCCCCCCC----hHHHHHH
Q 012062          155 ---TLTNRVITLWYRPPELLLGATKYGPA------VDMWSVGCIFAELLNG----------KPILPGKN----EAEQLSK  211 (472)
Q Consensus       155 ---~~~~~~gt~~y~aPE~l~~~~~~~~~------~DiwSlG~il~ell~G----------~~pf~~~~----~~~~~~~  211 (472)
                         .....++|..|+|||++.+. .+...      +||||||||+|+|++|          ..||....    ....+..
T Consensus       199 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  277 (337)
T 3mdy_A          199 VDIPPNTRVGTKRYMPPEVLDES-LNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMRE  277 (337)
T ss_dssp             ----CCSSCSCGGGCCHHHHTTC-CCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHH
T ss_pred             ccCCCCCCccCcceeChhhcccc-cCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHH
Confidence               12245789999999999763 34444      8999999999999999          66665432    1222222


Q ss_pred             HHHhcCCCCCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          212 IFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       212 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                      ..........        .+              .......++.++.+||.+||..||++|||+.||+++
T Consensus       278 ~~~~~~~~~~--------~~--------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          278 IVCIKKLRPS--------FP--------------NRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             HHTTSCCCCC--------CC--------------GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHhhhccCcc--------cc--------------ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            2211110000        00              000112466789999999999999999999999864


No 246
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=3.2e-36  Score=300.25  Aligned_cols=235  Identities=22%  Similarity=0.270  Sum_probs=176.8

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHh--cCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKK--LQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-   82 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~--l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-   82 (472)
                      .+++.||||+++...     ...+.+|+++++.  ++|+||+++++++.....            ....+||||||+.+ 
T Consensus        63 ~~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~------------~~~~~~lv~e~~~~g  125 (342)
T 1b6c_B           63 WRGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNG------------TWTQLWLVSDYHEHG  125 (342)
T ss_dssp             ETTEEEEEEEECGGG-----HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS------------SCCCEEEEECCCTTC
T ss_pred             EcCccEEEEEeCchh-----HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC------------ccceeEEEEeecCCC
Confidence            368999999996432     3467789999988  789999999999986321            12378999999996 


Q ss_pred             ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC
Q 012062           83 DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCH--------VNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN  154 (472)
Q Consensus        83 ~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH--------~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~  154 (472)
                      +|.+++.+.  .+++.+++.++.||+.||+|||        +++|+||||||+||||+.++++||+|||++.........
T Consensus       126 ~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~  203 (342)
T 1b6c_B          126 SLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT  203 (342)
T ss_dssp             BHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTE
T ss_pred             cHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccc
Confidence            777777553  5899999999999999999999        899999999999999999999999999999876543322


Q ss_pred             ---ccccccccCCCCChhhhcCCCC-----CCCCcchhhHHHHHHHHHhC----------CCCCCCCCh----HHHHHHH
Q 012062          155 ---TLTNRVITLWYRPPELLLGATK-----YGPAVDMWSVGCIFAELLNG----------KPILPGKNE----AEQLSKI  212 (472)
Q Consensus       155 ---~~~~~~gt~~y~aPE~l~~~~~-----~~~~~DiwSlG~il~ell~G----------~~pf~~~~~----~~~~~~i  212 (472)
                         ......+|..|+|||++.+...     ++.++||||||||+|+|++|          ..||.....    .+.+...
T Consensus       204 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  283 (342)
T 1b6c_B          204 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV  283 (342)
T ss_dssp             EEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHH
T ss_pred             cccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHH
Confidence               2344578999999999976322     22579999999999999999          778865422    2222222


Q ss_pred             HHhcCCCCCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcC
Q 012062          213 FELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDS  281 (472)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h  281 (472)
                      .........        ++.            .  .....+++.+.+||.+||..||++|||+.||+++
T Consensus       284 ~~~~~~~~~--------~~~------------~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          284 VCEQKLRPN--------IPN------------R--WQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             HTTSCCCCC--------CCG------------G--GGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhCCC--------Ccc------------c--ccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            211000000        000            0  0012345679999999999999999999999864


No 247
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=1.2e-36  Score=302.90  Aligned_cols=237  Identities=24%  Similarity=0.303  Sum_probs=166.6

Q ss_pred             ccCCCEEEEEEeecCCcCCCchhhHHHHHHH--HHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC
Q 012062            5 IKTGEIVALKKIRMDNEKEGFPITAIREIKI--LKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH   82 (472)
Q Consensus         5 ~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~i--l~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g   82 (472)
                      ..+++.||||+++...     ......|.++  ++.++|+||+++++.+.....           .....+|||||||++
T Consensus        33 ~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~-----------~~~~~~~lv~e~~~~   96 (336)
T 3g2f_A           33 SLDERPVAVKVFSFAN-----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTA-----------DGRMEYLLVMEYYPN   96 (336)
T ss_dssp             EETTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECT-----------TSCEEEEEEECCCTT
T ss_pred             EECCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCcchhhheeccccccc-----------CCCceEEEEEecCCC
Confidence            3478999999997543     2233444444  456899999999987654211           114468999999975


Q ss_pred             -ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CccccCCCCCcEEEcCCCCeEEeeccceeeeccCC
Q 012062           83 -DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN---------QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDH  152 (472)
Q Consensus        83 -~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~---------giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~  152 (472)
                       +|.+++...  .+++..++.|+.||+.||+|||++         +|+||||||+||||+.++.+||+|||+++.+....
T Consensus        97 g~L~~~l~~~--~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~  174 (336)
T 3g2f_A           97 GSLXKYLSLH--TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR  174 (336)
T ss_dssp             CBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSS
T ss_pred             CcHHHHHhhc--ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeeccccc
Confidence             777777554  358889999999999999999999         99999999999999999999999999998765322


Q ss_pred             -------CCccccccccCCCCChhhhcCC------CCCCCCcchhhHHHHHHHHHhCCCCCC-CCChH------------
Q 012062          153 -------NNTLTNRVITLWYRPPELLLGA------TKYGPAVDMWSVGCIFAELLNGKPILP-GKNEA------------  206 (472)
Q Consensus       153 -------~~~~~~~~gt~~y~aPE~l~~~------~~~~~~~DiwSlG~il~ell~G~~pf~-~~~~~------------  206 (472)
                             .......++|+.|+|||++.+.      ..++.++||||||||+|+|++|..||. +....            
T Consensus       175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~  254 (336)
T 3g2f_A          175 LVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGN  254 (336)
T ss_dssp             CC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCS
T ss_pred             ccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCC
Confidence                   1223345789999999998752      235568999999999999999965543 32211            


Q ss_pred             ----HHHHHHHHhcCCCCCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          207 ----EQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       207 ----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                          +.+..+........        .++.  .+.           ....++.++.+||.+||..||++|||+.||++
T Consensus       255 ~~~~~~~~~~~~~~~~~~--------~~~~--~~~-----------~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~  311 (336)
T 3g2f_A          255 HPTFEDMQVLVSREKQRP--------KFPE--AWK-----------ENSLAVRSLKETIEDCWDQDAEARLTAQXAEE  311 (336)
T ss_dssp             SCCHHHHHHHHTTSCCCC--------CCCT--TCC-----------CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CchHHHHHhhhcccccCC--------CCCc--ccc-----------cccchHHHHHHHHHHHhcCChhhCcchHHHHH
Confidence                11111111000000        0000  000           01135567999999999999999999999964


No 248
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=9.2e-36  Score=290.89  Aligned_cols=208  Identities=17%  Similarity=0.152  Sum_probs=164.4

Q ss_pred             CceeccCCCEEEEEEeecCCcC-CCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEec
Q 012062            1 MAREIKTGEIVALKKIRMDNEK-EGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEY   79 (472)
Q Consensus         1 La~~~~tg~~vAlK~i~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy   79 (472)
                      +|++..+++.||||+++..... ......+.+|+.++++++|+||+++++++..                .+.+||||||
T Consensus        49 ~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~----------------~~~~~lv~e~  112 (286)
T 3uqc_A           49 QALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT----------------RAGGLVVAEW  112 (286)
T ss_dssp             EEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE----------------TTEEEEEEEC
T ss_pred             EEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE----------------CCcEEEEEEe
Confidence            4788899999999999866433 2344678899999999999999999999987                5679999999


Q ss_pred             CCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCcccc
Q 012062           80 MDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN  158 (472)
Q Consensus        80 ~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  158 (472)
                      +++ +|.+++.+   .....++..|+.||+.||+|||++||+||||||+||||+.++.+||++++.              
T Consensus       113 ~~g~~L~~~l~~---~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~--------------  175 (286)
T 3uqc_A          113 IRGGSLQEVADT---SPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPAT--------------  175 (286)
T ss_dssp             CCEEEHHHHHTT---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCC--------------
T ss_pred             cCCCCHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccc--------------
Confidence            986 66666643   246668899999999999999999999999999999999999999985542              


Q ss_pred             ccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCC
Q 012062          159 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP  238 (472)
Q Consensus       159 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (472)
                             ++        .++.++|||||||+||+|++|+.||.+.+..+.+....                    ...  
T Consensus       176 -------~~--------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~--------------------~~~--  218 (286)
T 3uqc_A          176 -------MP--------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE--------------------RDT--  218 (286)
T ss_dssp             -------CT--------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC--------------------BCT--
T ss_pred             -------cC--------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH--------------------HHh--
Confidence                   22        36789999999999999999999998765422110000                    000  


Q ss_pred             chhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          239 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                       .............+++++.+||.+||..||++| |+.|+++
T Consensus       219 -~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          219 -AGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             -TSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred             -ccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence             000112334556788999999999999999999 9999985


No 249
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=3.5e-37  Score=301.63  Aligned_cols=233  Identities=22%  Similarity=0.256  Sum_probs=158.4

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHh--cCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC-
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKK--LQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-   82 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~--l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g-   82 (472)
                      .+++.||||+++..     ....+.+|.++++.  ++|+||+++++++......            ...+||||||+.+ 
T Consensus        24 ~~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~------------~~~~~lv~e~~~~g   86 (303)
T 3gxj_A           24 WRGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGT------------WTQLWLVSDYHEHG   86 (303)
T ss_dssp             CTTSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSS------------SEEEEEEEECCTTC
T ss_pred             EcCcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCc------------cceeEEEEeccCCC
Confidence            46899999998643     23456788888887  7899999999999863210            1268999999996 


Q ss_pred             ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC
Q 012062           83 DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCH--------VNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN  154 (472)
Q Consensus        83 ~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH--------~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~  154 (472)
                      +|.+++.+.  .+++..++.++.||+.||+|||        +++|+||||||+||||+.++.+||+|||+++........
T Consensus        87 ~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~~~~~  164 (303)
T 3gxj_A           87 SLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT  164 (303)
T ss_dssp             CHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEETTTTE
T ss_pred             CHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcceeccCCCcc
Confidence            777777543  5788889999999999999999        999999999999999999999999999999766543322


Q ss_pred             ---ccccccccCCCCChhhhcCCCC-----CCCCcchhhHHHHHHHHHhC----------CCCCCCCCh-----HHHHHH
Q 012062          155 ---TLTNRVITLWYRPPELLLGATK-----YGPAVDMWSVGCIFAELLNG----------KPILPGKNE-----AEQLSK  211 (472)
Q Consensus       155 ---~~~~~~gt~~y~aPE~l~~~~~-----~~~~~DiwSlG~il~ell~G----------~~pf~~~~~-----~~~~~~  211 (472)
                         .....++|+.|+|||++.+...     ++.++|||||||++|+|++|          ..||.....     .+....
T Consensus       165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  244 (303)
T 3gxj_A          165 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV  244 (303)
T ss_dssp             ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHH
T ss_pred             cccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCccHHHHHHH
Confidence               1233478999999999876422     23579999999999999999          555543211     111111


Q ss_pred             HHHhcCCCCCCCCccCCCCCccccCCCchhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhc
Q 012062          212 IFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD  280 (472)
Q Consensus       212 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~  280 (472)
                      +.....                   .+...  ..  ......++.+.+||++||..||++|||++|+++
T Consensus       245 ~~~~~~-------------------~~~~~--~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  290 (303)
T 3gxj_A          245 VCEQKL-------------------RPNIP--NR--WQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             HTTSCC-------------------CCCCC--GG--GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             HHHhhc-------------------CCCcc--cc--ccchhhHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence            100000                   00000  00  001134567999999999999999999999986


No 250
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.7e-36  Score=330.43  Aligned_cols=224  Identities=21%  Similarity=0.324  Sum_probs=173.5

Q ss_pred             ceecc-CCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecC
Q 012062            2 AREIK-TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYM   80 (472)
Q Consensus         2 a~~~~-tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~   80 (472)
                      |++.. +++.||||++..... ......+.+|+++|++|+|||||++++++...+..           ....+||||||+
T Consensus        99 a~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~-----------~~~~~~lv~E~~  166 (681)
T 2pzi_A           99 ALDRNVNGRPVVLKGLVHSGD-AEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRH-----------GDPVGYIVMEYV  166 (681)
T ss_dssp             EEEGGGTTEEEEEEESCSSCC-HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTT-----------SCEEEEEEEECC
T ss_pred             EEEcCCCCcEEEEEEeCccCC-HHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCC-----------CCceeEEEEEeC
Confidence            56665 789999999875432 22345678999999999999999999999863211           012369999999


Q ss_pred             CC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccc
Q 012062           81 DH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR  159 (472)
Q Consensus        81 ~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~  159 (472)
                      ++ +|.+.+..   .+++.+++.|+.||+.+|.|||++||+||||||+||||+.+ .+||+|||+++.....     ...
T Consensus       167 ~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~-----~~~  237 (681)
T 2pzi_A          167 GGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF-----GYL  237 (681)
T ss_dssp             CCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC-----SCC
T ss_pred             CCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhcccC-----Ccc
Confidence            97 44444333   69999999999999999999999999999999999999985 8999999999875432     445


Q ss_pred             cccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCCCCCccCCCCCccccCCCc
Q 012062          160 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS  239 (472)
Q Consensus       160 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (472)
                      ++|+.|+|||++.+  .++.++||||||||||+|++|..+|.+....                      .++       .
T Consensus       238 ~gt~~y~aPE~~~~--~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~----------------------~~~-------~  286 (681)
T 2pzi_A          238 YGTPGFQAPEIVRT--GPTVATDIYTVGRTLAALTLDLPTRNGRYVD----------------------GLP-------E  286 (681)
T ss_dssp             CCCTTTSCTTHHHH--CSCHHHHHHHHHHHHHHHHSCCCEETTEECS----------------------SCC-------T
T ss_pred             CCCccccCHHHHcC--CCCCceehhhhHHHHHHHHhCCCCCcccccc----------------------ccc-------c
Confidence            78999999999876  3488999999999999999998887642100                      000       0


Q ss_pred             hhhhhhHHHHhhhccHHHHHHHHHhhccCCCCCCCHHHHhcCCCC
Q 012062          240 RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF  284 (472)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~t~~elL~h~~f  284 (472)
                         .    .....+++.+.+||.+||..||++|+++.+++.|+|+
T Consensus       287 ---~----~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          287 ---D----DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             ---T----CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             ---c----ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence               0    0011245789999999999999999998888887665


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.98  E-value=7.1e-34  Score=302.79  Aligned_cols=173  Identities=19%  Similarity=0.107  Sum_probs=127.0

Q ss_pred             ceeccCCCEEEEEEeecCCcC--------CCchhhHHHHHHHHHhc-CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCe
Q 012062            2 AREIKTGEIVALKKIRMDNEK--------EGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGS   72 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~~--------~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (472)
                      |++.-+|+.||||++.++...        +.....+.+|+++|+++ .|+||+++++++++                ++.
T Consensus       253 ~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed----------------~~~  316 (569)
T 4azs_A          253 SRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGEN----------------AQS  316 (569)
T ss_dssp             CEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEEC----------------SSE
T ss_pred             cccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEE----------------CCE
Confidence            466778999999999865321        12234578899999999 69999999999997                678


Q ss_pred             EEEEEecCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccC
Q 012062           73 TYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYD  151 (472)
Q Consensus        73 ~~iVmEy~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~  151 (472)
                      +|||||||+| +|.+++.+ ...+++.   .|++||+.||+|||++|||||||||+||||+.+++|||+|||+|+.+...
T Consensus       317 ~yLVMEyv~G~~L~d~i~~-~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~  392 (569)
T 4azs_A          317 GWLVMEKLPGRLLSDMLAA-GEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD  392 (569)
T ss_dssp             EEEEEECCCSEEHHHHHHT-TCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred             EEEEEecCCCCcHHHHHHh-CCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence            9999999998 56666654 4467654   57899999999999999999999999999999999999999999876543


Q ss_pred             CCCccccccccCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHhCC
Q 012062          152 HNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK  197 (472)
Q Consensus       152 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~G~  197 (472)
                      . ....+.+||+.|||||++.+  .+..++|+||+|+++++|+++.
T Consensus       393 ~-~~~~t~vGTp~YmAPE~l~g--~~~~~~d~~s~g~~~~~l~~~~  435 (569)
T 4azs_A          393 C-SWPTNLVQSFFVFVNELFAE--NKSWNGFWRSAPVHPFNLPQPW  435 (569)
T ss_dssp             --CCSHHHHHHHHHHHHHHC-------------------CCCCTTH
T ss_pred             C-ccccCceechhhccHHHhCC--CCCCcccccccccchhhhcccc
Confidence            2 33455689999999999976  3567899999999988876653


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.89  E-value=1.9e-24  Score=228.75  Aligned_cols=169  Identities=15%  Similarity=0.142  Sum_probs=128.9

Q ss_pred             ccCCCEEEEEEeecCCcCCC------chhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEe
Q 012062            5 IKTGEIVALKKIRMDNEKEG------FPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFE   78 (472)
Q Consensus         5 ~~tg~~vAlK~i~~~~~~~~------~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmE   78 (472)
                      ...++.+|+|++........      ....+.+|+++|++++|+||+++..++..                .+..|||||
T Consensus       356 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~----------------~~~~~lVmE  419 (540)
T 3en9_A          356 SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD----------------LDNKRIMMS  419 (540)
T ss_dssp             ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE----------------TTTTEEEEE
T ss_pred             EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe----------------CCccEEEEE
Confidence            34678899998754322211      13346899999999999999944444333                335699999


Q ss_pred             cCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCC---
Q 012062           79 YMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN---  154 (472)
Q Consensus        79 y~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~---  154 (472)
                      ||++ +|.+++..         +..|+.||+.+|+|||+++|+||||||+||||+.  ++||+|||+++........   
T Consensus       420 ~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~  488 (540)
T 3en9_A          420 YINGKLAKDVIED---------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVD  488 (540)
T ss_dssp             CCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHH
T ss_pred             CCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccc
Confidence            9984 77776654         5689999999999999999999999999999999  8999999999876542211   


Q ss_pred             ---ccccccccCCCCChhhhcCC-CCCCCCcchhhHHHHHHHHHhCCCCC
Q 012062          155 ---TLTNRVITLWYRPPELLLGA-TKYGPAVDMWSVGCIFAELLNGKPIL  200 (472)
Q Consensus       155 ---~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~G~~pf  200 (472)
                         .....++|+.|||||++... ..|+..+|+||..+-..+.+..+..|
T Consensus       489 ~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          489 LIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             hhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence               12346789999999998641 24677889999998888887766544


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.83  E-value=2.5e-21  Score=188.21  Aligned_cols=127  Identities=16%  Similarity=0.130  Sum_probs=98.5

Q ss_pred             ceeccCCCEEEEEEeecCCcCC----------------CchhhHHHHHHHHHhcCCCCccceeEEeeCCCCCCCCCCCCC
Q 012062            2 AREIKTGEIVALKKIRMDNEKE----------------GFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPD   65 (472)
Q Consensus         2 a~~~~tg~~vAlK~i~~~~~~~----------------~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~   65 (472)
                      |++ .+|+.||||+++......                .....+.+|+.+|++++  | +++.+++..            
T Consensus       109 ~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~------------  172 (282)
T 1zar_A          109 CYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW------------  172 (282)
T ss_dssp             EEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE------------
T ss_pred             EEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec------------
Confidence            566 789999999997543211                02345789999999999  5 677666542            


Q ss_pred             CCCcCCeEEEEEecCCC-ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccc
Q 012062           66 GNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGL  144 (472)
Q Consensus        66 ~~~~~~~~~iVmEy~~g-~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~  144 (472)
                           +..|||||||++ +|.+ +..       ..+..++.||+.||.|||++||+||||||+||||+ ++.+||+|||+
T Consensus       173 -----~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~  238 (282)
T 1zar_A          173 -----EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQ  238 (282)
T ss_dssp             -----ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTT
T ss_pred             -----cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCC
Confidence                 245999999987 6665 321       23567999999999999999999999999999999 99999999999


Q ss_pred             eeeeccCCCCccccccccCCCCChhhhc
Q 012062          145 ARSFSYDHNNTLTNRVITLWYRPPELLL  172 (472)
Q Consensus       145 a~~~~~~~~~~~~~~~gt~~y~aPE~l~  172 (472)
                      |+.              +..++|||++.
T Consensus       239 a~~--------------~~~~~a~e~l~  252 (282)
T 1zar_A          239 SVE--------------VGEEGWREILE  252 (282)
T ss_dssp             CEE--------------TTSTTHHHHHH
T ss_pred             CeE--------------CCCCCHHHHHH
Confidence            863              44578999875


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.72  E-value=3.5e-18  Score=163.78  Aligned_cols=121  Identities=15%  Similarity=0.267  Sum_probs=88.9

Q ss_pred             ceeccCCCE--EEEEEeecCCcCC----C------------------chhhHHHHHHHHHhcCCCCc--cceeEEeeCCC
Q 012062            2 AREIKTGEI--VALKKIRMDNEKE----G------------------FPITAIREIKILKKLQHENV--IKLKEIVTSPG   55 (472)
Q Consensus         2 a~~~~tg~~--vAlK~i~~~~~~~----~------------------~~~~~~~Ei~il~~l~hpnI--v~l~~~~~~~~   55 (472)
                      |++..+|+.  ||||+++......    .                  ....+.+|+.+|++|.|++|  ..++++.    
T Consensus        66 a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~----  141 (258)
T 1zth_A           66 ADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGVSVPQPYTYM----  141 (258)
T ss_dssp             EEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEE----
T ss_pred             EEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEcC----
Confidence            566678999  9999986542110    0                  01257789999999998864  3333321    


Q ss_pred             CCCCCCCCCCCCCcCCeEEEEEecCCC------ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCCCc
Q 012062           56 PERDEQGRPDGNKYRGSTYMVFEYMDH------DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCH-VNQVLHRDIKGSN  128 (472)
Q Consensus        56 ~~~~~~~~~~~~~~~~~~~iVmEy~~g------~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH-~~giiHrDLKp~N  128 (472)
                                      ..||||||+++      .|.+....    +++..+..++.||+.+|.||| ++||+||||||+|
T Consensus       142 ----------------~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~N  201 (258)
T 1zth_A          142 ----------------KNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYN  201 (258)
T ss_dssp             ----------------TTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTS
T ss_pred             ----------------CCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHH
Confidence                            34899999952      33333221    234568899999999999999 9999999999999


Q ss_pred             EEEcCCCCeEEeeccceeee
Q 012062          129 LLIDNEGNLKLADFGLARSF  148 (472)
Q Consensus       129 ILl~~~~~vkL~DFG~a~~~  148 (472)
                      |||+.  .++|+|||+|...
T Consensus       202 ILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          202 IMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             EEESS--SEEECCCTTCEET
T ss_pred             EEEcC--cEEEEECcccccC
Confidence            99998  8999999999653


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.53  E-value=1.1e-14  Score=146.29  Aligned_cols=69  Identities=19%  Similarity=0.220  Sum_probs=55.9

Q ss_pred             EEEEecCCCChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCC----------eEEeecc
Q 012062           74 YMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN----------LKLADFG  143 (472)
Q Consensus        74 ~iVmEy~~g~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~----------vkL~DFG  143 (472)
                      +|||||++|..+..+..      ...+..++.||+.+|.+||++|||||||||+||||+.++.          +.||||+
T Consensus       187 ~LVME~i~G~~L~~l~~------~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~  260 (397)
T 4gyi_A          187 TIVMSLVDALPMRQVSS------VPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFP  260 (397)
T ss_dssp             EEEEECCSCEEGGGCCC------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCT
T ss_pred             eEEEEecCCccHhhhcc------cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeC
Confidence            79999999844332222      1245678999999999999999999999999999988763          8999999


Q ss_pred             ceeee
Q 012062          144 LARSF  148 (472)
Q Consensus       144 ~a~~~  148 (472)
                      .+...
T Consensus       261 Q~V~~  265 (397)
T 4gyi_A          261 QMVSM  265 (397)
T ss_dssp             TCEET
T ss_pred             CcccC
Confidence            87653


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.13  E-value=1.7e-10  Score=109.83  Aligned_cols=117  Identities=15%  Similarity=0.118  Sum_probs=87.6

Q ss_pred             CCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcC-CCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCCChh
Q 012062            7 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ-HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLT   85 (472)
Q Consensus         7 tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g~l~   85 (472)
                      .++.++||+.......  ....+.+|+.+|+.|. +..+.++++++..                .+..||||||++|..+
T Consensus        36 ~~~~~vlK~~~~~~~~--~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~----------------~~~~~lv~e~i~G~~l   97 (263)
T 3tm0_A           36 ENENLYLKMTDSRYKG--TTYDVEREKDMMLWLEGKLPVPKVLHFERH----------------DGWSNLLMSEADGVLC   97 (263)
T ss_dssp             SSCEEEEEEECGGGTT--STTCHHHHHHHHHHHTTTSCCCCEEEEEEE----------------TTEEEEEEECCSSEEH
T ss_pred             CCCcEEEEeCCcccCC--CHHHHHHHHHHHHHHhcCCCCCeEEEEEec----------------CCceEEEEEecCCeeh
Confidence            4688999998753211  1335789999999995 6677889988865                4578999999998543


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------------------------
Q 012062           86 GLADRPGLRFTVPQIKCYMKQLLTGLHYCHV-------------------------------------------------  116 (472)
Q Consensus        86 ~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~-------------------------------------------------  116 (472)
                      .....     +......++.++..+|+.||+                                                 
T Consensus        98 ~~~~~-----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  172 (263)
T 3tm0_A           98 SEEYE-----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYD  172 (263)
T ss_dssp             HHHCC-----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHH
T ss_pred             hhccC-----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHH
Confidence            32211     112345778899999999998                                                 


Q ss_pred             ----------CCccccCCCCCcEEEcCCCCeEEeecccee
Q 012062          117 ----------NQVLHRDIKGSNLLIDNEGNLKLADFGLAR  146 (472)
Q Consensus       117 ----------~giiHrDLKp~NILl~~~~~vkL~DFG~a~  146 (472)
                                ..++|+|+++.|||+++...+.|+||+.+.
T Consensus       173 ~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          173 FLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             HHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             HHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                      448999999999999876556799999764


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.06  E-value=5.9e-10  Score=105.40  Aligned_cols=112  Identities=13%  Similarity=0.097  Sum_probs=82.2

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCC--ccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCCC
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHEN--VIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHD   83 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpn--Iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g~   83 (472)
                      .+|+.|+||+....     ....+.+|+.+++.|.+.+  |.+++.+...                .+..|+||||++|.
T Consensus        42 ~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~----------------~~~~~~v~e~i~G~  100 (264)
T 1nd4_A           42 QGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTE----------------AGRDWLLLGEVPGQ  100 (264)
T ss_dssp             TTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC----------------SSCEEEEEECCSSE
T ss_pred             CCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccC----------------CCCCEEEEEecCCc
Confidence            45678999987643     1245779999999996545  4568887765                34679999999985


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---------------------------------------------
Q 012062           84 LTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ---------------------------------------------  118 (472)
Q Consensus        84 l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~g---------------------------------------------  118 (472)
                      .+. ...    .+   ...++.++...|..||+..                                             
T Consensus       101 ~l~-~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (264)
T 1nd4_A          101 DLL-SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFA  172 (264)
T ss_dssp             ETT-TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHH
T ss_pred             ccC-cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHH
Confidence            443 211    22   2356778888888888753                                             


Q ss_pred             -------------ccccCCCCCcEEEcCCCCeEEeecccee
Q 012062          119 -------------VLHRDIKGSNLLIDNEGNLKLADFGLAR  146 (472)
Q Consensus       119 -------------iiHrDLKp~NILl~~~~~vkL~DFG~a~  146 (472)
                                   ++|+||+|.|||++.+..+.|+||+.+.
T Consensus       173 ~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          173 RLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             HHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                         9999999999999876656799999874


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.98  E-value=2.3e-09  Score=107.01  Aligned_cols=124  Identities=13%  Similarity=0.191  Sum_probs=88.6

Q ss_pred             CCEEEEEEee--cCCcCCCchhhHHHHHHHHHhcC--CCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCCC
Q 012062            8 GEIVALKKIR--MDNEKEGFPITAIREIKILKKLQ--HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHD   83 (472)
Q Consensus         8 g~~vAlK~i~--~~~~~~~~~~~~~~Ei~il~~l~--hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g~   83 (472)
                      +..++||+..  ..... .....+.+|+.+|+.|.  +..+.+++.++.+..             ..+..|+||||++|.
T Consensus        61 ~~~~vlr~~~~p~~~~~-~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~-------------~~g~~~~vme~v~G~  126 (359)
T 3dxp_A           61 GQTYVMRAKPGPKSKLL-PSAHAIEREYRVMDALAGTDVPVAKMYALCEDES-------------VIGRAFYIMEFVSGR  126 (359)
T ss_dssp             SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT-------------TTSSCEEEEECCCCB
T ss_pred             CceEEEEeCCCCCCCCC-CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC-------------ccCCeEEEEEecCCe
Confidence            4567888765  32211 12346778999999997  445788888876521             124579999999984


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHH-----------------------------------------------
Q 012062           84 LTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHV-----------------------------------------------  116 (472)
Q Consensus        84 l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~-----------------------------------------------  116 (472)
                      .+...  ....++..+...++.+++..|+.||+                                               
T Consensus       127 ~l~~~--~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  204 (359)
T 3dxp_A          127 VLWDQ--SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWL  204 (359)
T ss_dssp             CCCCT--TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHG
T ss_pred             ecCCC--ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHH
Confidence            33211  11236788889999999999999997                                               


Q ss_pred             -----------CCccccCCCCCcEEEcCCCC--eEEeeccceee
Q 012062          117 -----------NQVLHRDIKGSNLLIDNEGN--LKLADFGLARS  147 (472)
Q Consensus       117 -----------~giiHrDLKp~NILl~~~~~--vkL~DFG~a~~  147 (472)
                                 ..++|+|+++.|||++.++.  +.|+||+.+..
T Consensus       205 ~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          205 PQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             GGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                       36999999999999997753  68999998864


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.77  E-value=6.6e-09  Score=101.20  Aligned_cols=167  Identities=16%  Similarity=0.085  Sum_probs=103.0

Q ss_pred             CEEEEEEeecCCcCCCchhhHHHHHHHHHhcC-CCC--ccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCCChh
Q 012062            9 EIVALKKIRMDNEKEGFPITAIREIKILKKLQ-HEN--VIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLT   85 (472)
Q Consensus         9 ~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpn--Iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g~l~   85 (472)
                      +.++||+.+..    .....+.+|+.+|+.|. +..  +.+++......             ......|+|||+++|..+
T Consensus        41 ~~~vlR~~~~~----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~-------------~~~~~~~~vm~~i~G~~l  103 (304)
T 3sg8_A           41 RDFIFKFPKHS----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPS-------------ETYQMSFAGFTKIKGVPL  103 (304)
T ss_dssp             TSEEEEEESSH----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCC-------------SSCSCSCEEEECCCCEEC
T ss_pred             CEEEEEecCCc----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCC-------------CCCCcceEEEcccCCeEC
Confidence            45778875422    23456789999999884 333  23443332211             011234899999998433


Q ss_pred             h-hhcCCCCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------------------
Q 012062           86 G-LADRPGLRFTVPQIKCYMKQLLTGLHYCHV------------------------------------------------  116 (472)
Q Consensus        86 ~-~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~------------------------------------------------  116 (472)
                      . ...   ..++..+...++.++...|+.||+                                                
T Consensus       104 ~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  180 (304)
T 3sg8_A          104 TPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDI  180 (304)
T ss_dssp             CHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHH
T ss_pred             Ccccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHH
Confidence            2 222   136777888888999998888886                                                


Q ss_pred             ----------CCccccCCCCCcEEEcC--CCCeEEeeccceeeeccCCCCccccccccCCC---CChhhhcCC-CCC---
Q 012062          117 ----------NQVLHRDIKGSNLLIDN--EGNLKLADFGLARSFSYDHNNTLTNRVITLWY---RPPELLLGA-TKY---  177 (472)
Q Consensus       117 ----------~giiHrDLKp~NILl~~--~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y---~aPE~l~~~-~~~---  177 (472)
                                ..++|+|+++.|||++.  ...+.|+||+.+.......  ...   ....+   ..++.+... ..|   
T Consensus       181 l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~--Dl~---~~~~~~~~~~~~~~~~~l~~Y~~~  255 (304)
T 3sg8_A          181 LENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN--DFI---SLMEDDEEYGMEFVSKILNHYKHK  255 (304)
T ss_dssp             HTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH--HHH---TTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred             HhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH--HHH---HHHhhccccCHHHHHHHHHHcCCC
Confidence                      13799999999999998  4557899999986532110  000   01111   233321100 001   


Q ss_pred             ---------CCCcchhhHHHHHHHHHhCCCCC
Q 012062          178 ---------GPAVDMWSVGCIFAELLNGKPIL  200 (472)
Q Consensus       178 ---------~~~~DiwSlG~il~ell~G~~pf  200 (472)
                               ....++|+++.++|.+.+|..+|
T Consensus       256 ~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          256 DIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence                     12258999999999999997544


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.36  E-value=6.8e-07  Score=87.61  Aligned_cols=114  Identities=17%  Similarity=0.216  Sum_probs=79.6

Q ss_pred             CCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCC--C--CccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCCC
Q 012062            8 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQH--E--NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHD   83 (472)
Q Consensus         8 g~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~h--p--nIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g~   83 (472)
                      ++.++||+.....    ....+.+|..+|+.|.+  .  .|.+++.+  .                  ..|+||||++|.
T Consensus        57 g~~~vlR~~~~~~----~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~--~------------------~~~lvme~i~G~  112 (320)
T 3r70_A           57 NEQYVVKVPKRDS----VRISQKRELELYRFLENCKLSYQIPAVVYQ--S------------------DRFNIMKYIKGE  112 (320)
T ss_dssp             TTTEEEEEESSHH----HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE--C------------------SSCEEEECCCCB
T ss_pred             CCEEEEEeCCcHH----HHHHHHHHHHHHHHHHhcCCCCCcceEEec--C------------------CcEEEEeecCCc
Confidence            5567888764221    13457889999999976  1  23344433  1                  238999999984


Q ss_pred             hhh-hhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--------------------------------------------
Q 012062           84 LTG-LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ--------------------------------------------  118 (472)
Q Consensus        84 l~~-~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~g--------------------------------------------  118 (472)
                      .+. ...   ..++..+...++.++...|+.||+..                                            
T Consensus       113 ~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (320)
T 3r70_A          113 RITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHI  189 (320)
T ss_dssp             CCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred             ccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHH
Confidence            332 221   13677778888888888888888532                                            


Q ss_pred             -------------------ccccCCCCCcEEEcCCCCeEEeeccceeee
Q 012062          119 -------------------VLHRDIKGSNLLIDNEGNLKLADFGLARSF  148 (472)
Q Consensus       119 -------------------iiHrDLKp~NILl~~~~~vkL~DFG~a~~~  148 (472)
                                         ++|+|+++.|||++....+.|+||+.+...
T Consensus       190 ~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~  238 (320)
T 3r70_A          190 ETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG  238 (320)
T ss_dssp             HHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred             HHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence                               389999999999998665799999998653


No 261
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.27  E-value=4.4e-06  Score=81.32  Aligned_cols=118  Identities=15%  Similarity=0.129  Sum_probs=77.6

Q ss_pred             CCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCC---CccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCCCh
Q 012062            8 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHE---NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDL   84 (472)
Q Consensus         8 g~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hp---nIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g~l   84 (472)
                      ++.++||+.+.    ......+.+|+.+|+.|.+.   .|.+++.+....               .+..|+|||+++|..
T Consensus        39 g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~---------------~g~~~~v~e~i~G~~   99 (306)
T 3tdw_A           39 NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRS---------------DGNPFVGYRKVQGQI   99 (306)
T ss_dssp             TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECT---------------TSCEEEEEECCCSEE
T ss_pred             CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccC---------------CCceEEEEeccCCeE
Confidence            45677887432    12345678999999999753   244555555321               345689999999853


Q ss_pred             hhh-hcCCCCCCCHHHHHHHHHHHHHHHHHHHHC----------------------------------------------
Q 012062           85 TGL-ADRPGLRFTVPQIKCYMKQLLTGLHYCHVN----------------------------------------------  117 (472)
Q Consensus        85 ~~~-~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~----------------------------------------------  117 (472)
                      +.. ...   .++..+...++.+|...|+.||+.                                              
T Consensus       100 l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~  176 (306)
T 3tdw_A          100 LGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRF  176 (306)
T ss_dssp             CHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHH
T ss_pred             Cchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHH
Confidence            322 111   245555666666666666666643                                              


Q ss_pred             --------------CccccCCCCCcEEEcC---CCCe-EEeeccceee
Q 012062          118 --------------QVLHRDIKGSNLLIDN---EGNL-KLADFGLARS  147 (472)
Q Consensus       118 --------------giiHrDLKp~NILl~~---~~~v-kL~DFG~a~~  147 (472)
                                    .++|+|+++.|||++.   ++.+ .|+||+.+..
T Consensus       177 ~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          177 QSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                          3589999999999987   4554 8999998754


No 262
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.08  E-value=1.2e-05  Score=76.33  Aligned_cols=115  Identities=15%  Similarity=0.106  Sum_probs=77.6

Q ss_pred             CCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcC-CCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCCCh-
Q 012062            7 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ-HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDL-   84 (472)
Q Consensus         7 tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g~l-   84 (472)
                      .+..++||+-...     ....+.+|..+|+.|. +--|.+++.++.+                .+..|||||+++|.. 
T Consensus        49 ~~~~~~lk~~~~~-----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~----------------~~~~~lvme~l~G~~~  107 (272)
T 4gkh_A           49 NAPELFLKHGKGS-----VANDVTDEMVRLNWLTAFMPLPTIKHFIRT----------------PDDAWLLTTAIPGKTA  107 (272)
T ss_dssp             TCCCEEEEEEETH-----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEE----------------TTEEEEEEECCCSEEH
T ss_pred             CCeEEEEEECCCC-----CHhHHHHHHHHHHHhccCCCcCeEEEEEEE----------------CCeEEEEEEeeCCccc
Confidence            4556888876532     2445778999999885 3235677777765                456799999999843 


Q ss_pred             hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-----------------------------------------------
Q 012062           85 TGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN-----------------------------------------------  117 (472)
Q Consensus        85 ~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~-----------------------------------------------  117 (472)
                      ......     .......+..++...|..||..                                               
T Consensus       108 ~~~~~~-----~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (272)
T 4gkh_A          108 FQVLEE-----YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE  182 (272)
T ss_dssp             HHHHHH-----CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred             cccccC-----CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence            222211     1122344556666666666641                                               


Q ss_pred             -----------CccccCCCCCcEEEcCCCCeEEeeccceee
Q 012062          118 -----------QVLHRDIKGSNLLIDNEGNLKLADFGLARS  147 (472)
Q Consensus       118 -----------giiHrDLKp~NILl~~~~~vkL~DFG~a~~  147 (472)
                                 .++|+|+.+.|||++..+.+-|+||+.+..
T Consensus       183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                       268999999999999877677999998743


No 263
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.05  E-value=1e-05  Score=80.73  Aligned_cols=30  Identities=27%  Similarity=0.358  Sum_probs=26.2

Q ss_pred             CccccCCCCCcEEEcCCCCeEEeeccceee
Q 012062          118 QVLHRDIKGSNLLIDNEGNLKLADFGLARS  147 (472)
Q Consensus       118 giiHrDLKp~NILl~~~~~vkL~DFG~a~~  147 (472)
                      .++|+|+++.|||++..+.+.|+||+.+..
T Consensus       214 ~l~HgDl~~~Nil~~~~~~~~viD~~~~~~  243 (362)
T 3ovc_A          214 HLVHADFGSNNVLTDNGRITAVIDWSEAMF  243 (362)
T ss_dssp             EEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred             EEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence            579999999999998776788999998854


No 264
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.97  E-value=9.6e-06  Score=80.37  Aligned_cols=31  Identities=16%  Similarity=0.217  Sum_probs=25.9

Q ss_pred             CCccccCCCCCcEEEcCCCCeEEeeccceee
Q 012062          117 NQVLHRDIKGSNLLIDNEGNLKLADFGLARS  147 (472)
Q Consensus       117 ~giiHrDLKp~NILl~~~~~vkL~DFG~a~~  147 (472)
                      ..++|+|+++.|||+++...+.|+||..+..
T Consensus       222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~  252 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVAL  252 (357)
T ss_dssp             CEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred             ceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence            4699999999999999644579999998753


No 265
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.73  E-value=0.00017  Score=69.43  Aligned_cols=56  Identities=16%  Similarity=0.097  Sum_probs=39.8

Q ss_pred             cCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCC---CccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC
Q 012062            6 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHE---NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH   82 (472)
Q Consensus         6 ~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hp---nIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g   82 (472)
                      .+|+.|+||+.....  ......+.+|+.+|+.|.+.   .|.+++.+-.                    -||||||+++
T Consensus        37 ~dG~~~vvK~~~~~~--~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~~--------------------~~lvme~l~g   94 (288)
T 3d1u_A           37 ADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWDD--------------------RTLAMEWVDE   94 (288)
T ss_dssp             TTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEET--------------------TEEEEECCCC
T ss_pred             CCCCeEEEEecCCCC--cchhHHHHHHHHHHHHHHhcCCCCcCeEEEecC--------------------cEEEEEeccc
Confidence            468899999865332  12234678999999999875   4667766531                    3899999987


Q ss_pred             C
Q 012062           83 D   83 (472)
Q Consensus        83 ~   83 (472)
                      .
T Consensus        95 ~   95 (288)
T 3d1u_A           95 R   95 (288)
T ss_dssp             C
T ss_pred             C
Confidence            3


No 266
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.56  E-value=0.00015  Score=70.81  Aligned_cols=30  Identities=17%  Similarity=0.297  Sum_probs=27.0

Q ss_pred             CCccccCCCCCcEEEcCCCCeEEeecccee
Q 012062          117 NQVLHRDIKGSNLLIDNEGNLKLADFGLAR  146 (472)
Q Consensus       117 ~giiHrDLKp~NILl~~~~~vkL~DFG~a~  146 (472)
                      ..++|+|+++.|||++.++.+.|+||+.+.
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            579999999999999877889999999763


No 267
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.53  E-value=0.00028  Score=64.37  Aligned_cols=97  Identities=15%  Similarity=0.020  Sum_probs=64.8

Q ss_pred             ChhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEEcCCCCeEEeeccceeeeccCCCCccccccc
Q 012062           83 DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHV-NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI  161 (472)
Q Consensus        83 ~l~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~-~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g  161 (472)
                      +|.+++...+.+++++++|.++.|.+..|.-+-. +.-..+=+.+..|+|..+|+|.+.+ ..+.             ..
T Consensus        34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~-------------~~   99 (229)
T 2yle_A           34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD-------------AG   99 (229)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C------------------
T ss_pred             cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc-------------cc
Confidence            4677777777789999999999999999887722 2222444557899999999887764 1110             11


Q ss_pred             cCCCCChhhhcCCCCCCCCcchhhHHHHHHHHHh
Q 012062          162 TLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN  195 (472)
Q Consensus       162 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~  195 (472)
                      ...+.+||++.  ...+.+.=|||||++||.-+-
T Consensus       100 ~~~~~~pe~~~--~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A          100 EPPPVAGKLGY--SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             -------CCSS--SSSCHHHHHHHHHHHHHHHHT
T ss_pred             ccCCCChhhcc--ccchHHHHHHHHHHHHHHHhh
Confidence            33567888653  344567789999999999985


No 268
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.51  E-value=0.00033  Score=70.34  Aligned_cols=30  Identities=17%  Similarity=0.314  Sum_probs=25.6

Q ss_pred             HCCccccCCCCCcEEEcCCCCeEEeecccee
Q 012062          116 VNQVLHRDIKGSNLLIDNEGNLKLADFGLAR  146 (472)
Q Consensus       116 ~~giiHrDLKp~NILl~~~~~vkL~DFG~a~  146 (472)
                      ...++|+|+.+.|||++.++ ++|+||.++.
T Consensus       226 ~~~L~HGDl~~~Nil~~~~~-~~lID~e~a~  255 (397)
T 2olc_A          226 AETLIHGDLHTGSIFASEHE-TKVIDPEFAF  255 (397)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCE
T ss_pred             CCceeeCCCCcCcEEEeCCC-eEEEeCcccc
Confidence            35799999999999998764 9999998764


No 269
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.38  E-value=0.00042  Score=66.82  Aligned_cols=29  Identities=21%  Similarity=0.260  Sum_probs=24.5

Q ss_pred             CccccCCCCCcEEEcCCCCeEEeeccceee
Q 012062          118 QVLHRDIKGSNLLIDNEGNLKLADFGLARS  147 (472)
Q Consensus       118 giiHrDLKp~NILl~~~~~vkL~DFG~a~~  147 (472)
                      .++|+|+.+.||| ..++.+.|+||..+..
T Consensus       174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             eeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            4899999999999 5566799999998753


No 270
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.10  E-value=0.0012  Score=65.54  Aligned_cols=28  Identities=29%  Similarity=0.513  Sum_probs=24.2

Q ss_pred             CccccCCCCCcEEEcCCCCeEEeecccee
Q 012062          118 QVLHRDIKGSNLLIDNEGNLKLADFGLAR  146 (472)
Q Consensus       118 giiHrDLKp~NILl~~~~~vkL~DFG~a~  146 (472)
                      .++|+|+++.|||++.+. +.|+||..+.
T Consensus       213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a~  240 (369)
T 3c5i_A          213 VFCHNDLQENNIINTNKC-LRLIDFEYSG  240 (369)
T ss_dssp             EEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred             EEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence            599999999999998654 9999998875


No 271
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.09  E-value=0.0014  Score=66.72  Aligned_cols=51  Identities=20%  Similarity=0.122  Sum_probs=34.2

Q ss_pred             CCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCc-cceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC
Q 012062            8 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENV-IKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH   82 (472)
Q Consensus         8 g~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnI-v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g   82 (472)
                      ++.|+||+....    .....+++|+.+++.|...+| .+++.++..                    .+||||++|
T Consensus       105 ~~~~vlRi~~~~----~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~--------------------g~v~e~l~G  156 (429)
T 1nw1_A          105 PNKVLLRVYFNP----ETESHLVAESVIFTLLSERHLGPKLYGIFSG--------------------GRLEEYIPS  156 (429)
T ss_dssp             CSEEEEEEECSC----CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT--------------------EEEECCCCE
T ss_pred             CceEEEEEeCCC----CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC--------------------CEEEEEeCC
Confidence            578889987421    112456689999999864444 567666532                    389999986


No 272
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.09  E-value=0.002  Score=64.35  Aligned_cols=116  Identities=17%  Similarity=0.124  Sum_probs=70.8

Q ss_pred             CCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCC-ccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCCChhh
Q 012062            8 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHEN-VIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTG   86 (472)
Q Consensus         8 g~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpn-Iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g~l~~   86 (472)
                      ++.|+||+....   ........+|..+++.|.--+ ..+++.++.+                    .+||||++|..+.
T Consensus        82 ~~~~vlR~~g~~---~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~--------------------g~v~e~i~G~~l~  138 (379)
T 3feg_A           82 PREVLLRLYGAI---LQGVDSLVLESVMFAILAERSLGPQLYGVFPE--------------------GRLEQYIPSRPLK  138 (379)
T ss_dssp             CSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT--------------------EEEEECCSEEECC
T ss_pred             CCeEEEEECCCc---cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC--------------------ccEEEEecCccCC
Confidence            467888885321   112455678999999885333 3566666532                    3899999872211


Q ss_pred             ---hh---------------cCCC----CCCC--HHHHHHHHHHHHH-------------------HHHHHH----H---
Q 012062           87 ---LA---------------DRPG----LRFT--VPQIKCYMKQLLT-------------------GLHYCH----V---  116 (472)
Q Consensus        87 ---~~---------------~~~~----~~l~--~~~i~~i~~Qll~-------------------aL~~LH----~---  116 (472)
                         +.               ....    ....  ..++..|+.++..                   .+..|.    .   
T Consensus       139 ~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~  218 (379)
T 3feg_A          139 TQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPS  218 (379)
T ss_dssp             GGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHTSCC
T ss_pred             hhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhhcCC
Confidence               00               0011    1112  3456666655422                   233332    2   


Q ss_pred             -CCccccCCCCCcEEEcCC----CCeEEeecccee
Q 012062          117 -NQVLHRDIKGSNLLIDNE----GNLKLADFGLAR  146 (472)
Q Consensus       117 -~giiHrDLKp~NILl~~~----~~vkL~DFG~a~  146 (472)
                       ..++|+|+.+.|||++.+    +.+.|+||..|.
T Consensus       219 ~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          219 PVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             CEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             CcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence             259999999999999876    689999999874


No 273
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.01  E-value=0.0012  Score=63.88  Aligned_cols=30  Identities=27%  Similarity=0.310  Sum_probs=25.6

Q ss_pred             CCccccCCCCCcEEEcCCCCeEEeecccee
Q 012062          117 NQVLHRDIKGSNLLIDNEGNLKLADFGLAR  146 (472)
Q Consensus       117 ~giiHrDLKp~NILl~~~~~vkL~DFG~a~  146 (472)
                      .+++|+|+++.|||++.+..+.|+||+.+.
T Consensus       187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            369999999999999887656899999774


No 274
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.90  E-value=0.0028  Score=61.76  Aligned_cols=31  Identities=32%  Similarity=0.397  Sum_probs=27.0

Q ss_pred             CCccccCCCCCcEEEcCC----CCeEEeeccceee
Q 012062          117 NQVLHRDIKGSNLLIDNE----GNLKLADFGLARS  147 (472)
Q Consensus       117 ~giiHrDLKp~NILl~~~----~~vkL~DFG~a~~  147 (472)
                      ..++|+|+.+.|||++.+    +.+.|+||+.+..
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            479999999999999874    6799999998854


No 275
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.75  E-value=0.0074  Score=58.55  Aligned_cols=56  Identities=20%  Similarity=0.191  Sum_probs=40.1

Q ss_pred             CCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcC---CCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCCC
Q 012062            7 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ---HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHD   83 (472)
Q Consensus         7 tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~---hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g~   83 (472)
                      ++..++||+....     ....+..|+.+|+.|.   ...|.+++.+...                .+..|+|||++++.
T Consensus        58 ~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~----------------~g~~~lvme~l~G~  116 (312)
T 3jr1_A           58 EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNS----------------QGHSFLLLEALNKS  116 (312)
T ss_dssp             SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC----------------SSEEEEEEECCCCC
T ss_pred             CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec----------------CCceEEEEEeccCC
Confidence            4567888876532     2445778999999884   2557778777654                35689999999874


No 276
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.58  E-value=0.013  Score=59.89  Aligned_cols=52  Identities=23%  Similarity=0.159  Sum_probs=33.6

Q ss_pred             CCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCCc-cceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCC
Q 012062            8 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENV-IKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH   82 (472)
Q Consensus         8 g~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnI-v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g   82 (472)
                      ++.|+||+.....  + ......+|+.+|+.|...+| .+++.++..                    .+||||++|
T Consensus       133 ~~~~vLRi~g~~~--~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~~--------------------G~v~e~I~G  185 (458)
T 2qg7_A          133 QAKYLIRLYGPKT--D-EIINREREKKISCILYNKNIAKKIYVFFTN--------------------GRIEEFMDG  185 (458)
T ss_dssp             TEEEEEEEECC-C--C-SCSCHHHHHHHHHHHTTSSSBCCEEEEETT--------------------EEEEECCCS
T ss_pred             CceEEEEECCCCh--h-hhcCHHHHHHHHHHHHhcCCCCCEEEEeCC--------------------eEEEEeeCC
Confidence            3678888774321  1 12233589999999976555 467766631                    369999987


No 277
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.27  E-value=0.027  Score=53.52  Aligned_cols=56  Identities=16%  Similarity=0.115  Sum_probs=36.0

Q ss_pred             ccCCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCC---CccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCC
Q 012062            5 IKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHE---NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD   81 (472)
Q Consensus         5 ~~tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hp---nIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~   81 (472)
                      ..+|+.|.||+......  .....+..|+..|+.|..-   -+.+++.+-.                    -++||||++
T Consensus        36 l~DG~~~~vK~~~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~--------------------~~lv~e~l~   93 (288)
T 3f7w_A           36 LADGTPLFVKALPDDAP--ALDGLFRAEALGLDWLGRSFGSPVPQVAGWDD--------------------RTLAMEWVD   93 (288)
T ss_dssp             ETTSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEET--------------------TEEEEECCC
T ss_pred             ECCCCEEEEEEeCCCCc--chhhHHHHHHHHHHHHHhhCCCCcceEEeccC--------------------ceEEEEeec
Confidence            46789999998654322  1233567899999998532   2344444321                    279999997


Q ss_pred             C
Q 012062           82 H   82 (472)
Q Consensus        82 g   82 (472)
                      +
T Consensus        94 ~   94 (288)
T 3f7w_A           94 E   94 (288)
T ss_dssp             C
T ss_pred             c
Confidence            5


No 278
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=96.17  E-value=0.013  Score=59.29  Aligned_cols=29  Identities=24%  Similarity=0.542  Sum_probs=25.6

Q ss_pred             CccccCCCCCcEEEcCCCCeEEeeccceee
Q 012062          118 QVLHRDIKGSNLLIDNEGNLKLADFGLARS  147 (472)
Q Consensus       118 giiHrDLKp~NILl~~~~~vkL~DFG~a~~  147 (472)
                      .++|+|+.+.||| +.++.+.|+||..|..
T Consensus       263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          263 VFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             eEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            5899999999999 7778899999998753


No 279
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.14  E-value=0.011  Score=59.50  Aligned_cols=29  Identities=28%  Similarity=0.403  Sum_probs=26.0

Q ss_pred             CccccCCCCCcEEEcCC------CCeEEeecccee
Q 012062          118 QVLHRDIKGSNLLIDNE------GNLKLADFGLAR  146 (472)
Q Consensus       118 giiHrDLKp~NILl~~~------~~vkL~DFG~a~  146 (472)
                      .++|+|+.+.|||++.+      +.+.|+||..|.
T Consensus       245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~  279 (401)
T 3f2s_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred             eEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence            59999999999999876      689999998874


No 280
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.33  E-value=0.033  Score=55.87  Aligned_cols=29  Identities=28%  Similarity=0.473  Sum_probs=24.5

Q ss_pred             ccccCCCCCcEEE------cCCCCeEEeeccceee
Q 012062          119 VLHRDIKGSNLLI------DNEGNLKLADFGLARS  147 (472)
Q Consensus       119 iiHrDLKp~NILl------~~~~~vkL~DFG~a~~  147 (472)
                      ++|+|+.+.|||+      +++..|+|+||.+|..
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            6899999999999      3456799999998853


No 281
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=95.29  E-value=0.012  Score=59.32  Aligned_cols=32  Identities=9%  Similarity=0.313  Sum_probs=28.2

Q ss_pred             HHCCccccCCCCCcEEEcCCCCeEEeeccceee
Q 012062          115 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS  147 (472)
Q Consensus       115 H~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~  147 (472)
                      +...++|+|+++.|||++.++ ++|+||+.+..
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            456899999999999999876 99999998864


No 282
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=93.79  E-value=0.047  Score=52.66  Aligned_cols=28  Identities=29%  Similarity=0.337  Sum_probs=24.5

Q ss_pred             CCccccCCCCCcEEEcCCCCeEEeecccee
Q 012062          117 NQVLHRDIKGSNLLIDNEGNLKLADFGLAR  146 (472)
Q Consensus       117 ~giiHrDLKp~NILl~~~~~vkL~DFG~a~  146 (472)
                      ..++|+|+++.|||++ + .+.|+||+.+.
T Consensus       195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             CEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred             eeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence            4689999999999999 4 79999998764


No 283
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=92.21  E-value=0.085  Score=51.49  Aligned_cols=31  Identities=26%  Similarity=0.415  Sum_probs=27.5

Q ss_pred             CCccccCCCCCcEEEcCCCCeEEeeccceee
Q 012062          117 NQVLHRDIKGSNLLIDNEGNLKLADFGLARS  147 (472)
Q Consensus       117 ~giiHrDLKp~NILl~~~~~vkL~DFG~a~~  147 (472)
                      ..++|+|+.+.|||++.++.+.|+||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            4699999999999999878899999987754


No 284
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=92.20  E-value=0.026  Score=56.96  Aligned_cols=7  Identities=14%  Similarity=0.116  Sum_probs=2.6

Q ss_pred             HHHHHHH
Q 012062          257 ALELLEK  263 (472)
Q Consensus       257 ~~~ll~~  263 (472)
                      +++-+++
T Consensus       322 fR~~~~~  328 (448)
T 2z73_A          322 FREAISQ  328 (448)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            3333333


No 285
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=79.32  E-value=3.8  Score=36.94  Aligned_cols=83  Identities=14%  Similarity=0.109  Sum_probs=57.4

Q ss_pred             CCCCccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCCCh-hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 012062           40 QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDL-TGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ  118 (472)
Q Consensus        40 ~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g~l-~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~g  118 (472)
                      .|++++.. .+-+.                .+.+.|.++.-+... +..+.    .++..+.++++..|+....+++  .
T Consensus        43 ~~~~Fl~~-~I~e~----------------eD~v~~~y~~~~~~~~f~~ik----~~~~~eKlr~l~ni~~l~~~~~--~   99 (215)
T 4ann_A           43 HSPYFIDA-ELTEL----------------RDSFQIHYDINDNHTPFDNIK----SFTKNEKLRYLLNIKNLEEVNR--T   99 (215)
T ss_dssp             CCTTBCCE-EEEEC----------------SSEEEEEECCCTTSEEGGGGG----GSCHHHHHHHHHHGGGGGGGGG--S
T ss_pred             cCCcccce-EEEEc----------------ccEEEEEEEcCcccCCHHHHH----hcCHHHHHHHHHHHHHHHHHhc--C
Confidence            58888876 45444                345666666554322 22232    3688889999999888774443  3


Q ss_pred             ccccCCCCCcEEEcCCCCeEEeeccce
Q 012062          119 VLHRDIKGSNLLIDNEGNLKLADFGLA  145 (472)
Q Consensus       119 iiHrDLKp~NILl~~~~~vkL~DFG~a  145 (472)
                      -+|--|.|+||+++.++.++|+-.|+.
T Consensus       100 r~tf~L~P~NL~f~~~~~p~i~~RGik  126 (215)
T 4ann_A          100 RYTFVLAPDELFFTRDGLPIAKTRGLQ  126 (215)
T ss_dssp             SEECCCSGGGEEECTTSCEEESCCEET
T ss_pred             ceEEEEecceEEEcCCCCEEEEEccCc
Confidence            467789999999999999999987753


No 286
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=76.30  E-value=4.4  Score=36.64  Aligned_cols=70  Identities=11%  Similarity=0.012  Sum_probs=48.7

Q ss_pred             CCeEEEEEecCCCCh-hhhhcCCCCCCCHHHHHHHHHHHHHHHH-HHHHCCccccCCCCCcEEEcCCCCeEEeeccce
Q 012062           70 RGSTYMVFEYMDHDL-TGLADRPGLRFTVPQIKCYMKQLLTGLH-YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLA  145 (472)
Q Consensus        70 ~~~~~iVmEy~~g~l-~~~~~~~~~~l~~~~i~~i~~Qll~aL~-~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a  145 (472)
                      ++.+.|.++.-+... +..+.    .++..+.++++..|+.... ++  ..-+|--|.|+||+++.++.++|.-.|+-
T Consensus        60 eD~~~i~y~~~~~~~~f~~i~----~~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL~f~~~~~p~i~hRGi~  131 (219)
T 4ano_A           60 EDEVKVVIKPPSSFLTFAAIR----KTTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENLMFNRALEPFFLHVGVK  131 (219)
T ss_dssp             SSEEEEEEECCTTCEEHHHHH----TSCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGEEECTTCCEEESCCEET
T ss_pred             CCEEEEEEEcCcccCcHHHHH----hcCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceEEEeCCCcEEEEEcCCc
Confidence            445666666654422 22332    3688888888887776555 33  44577789999999999999999988863


No 287
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=63.22  E-value=9.1  Score=40.77  Aligned_cols=45  Identities=29%  Similarity=0.384  Sum_probs=33.0

Q ss_pred             HHHHHHHHHHH--HHHHHHHHCCccccCCCCCcEEEcCCCCeEEeecccee
Q 012062           98 PQIKCYMKQLL--TGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR  146 (472)
Q Consensus        98 ~~i~~i~~Qll--~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~  146 (472)
                      .....|+++++  ..+.|+=  ||  +|=+++||||+.+|++.-+|||.+.
T Consensus       529 ~ar~nF~~SlA~~Svv~YIL--Gl--GDRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          529 EVMDTYIKSCAGYCVITYLL--GV--GDRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH--TC--CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred             HHHHHHHHHHHHHHHHHHHc--cC--CCCCCcceEEeCCCCEEEEeehhhh
Confidence            34556666664  3344543  33  5888999999999999999999873


No 288
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=55.48  E-value=17  Score=40.82  Aligned_cols=42  Identities=19%  Similarity=0.198  Sum_probs=29.5

Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeecccee
Q 012062          103 YMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR  146 (472)
Q Consensus       103 i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~  146 (472)
                      ++++++.----.+-.||  +|=.++||||+.+|++.-+|||.+.
T Consensus       923 F~~SlA~ySvv~YILGl--GDRH~~NILid~tG~v~HIDFG~~f  964 (1092)
T 2y3a_A          923 FTLSCAGYCVASYVLGI--GDRHSDNIMVKKTGQLFHIDFGHIL  964 (1092)
T ss_dssp             HHHHHHHHHHHHHHTTC--CCCCTTTEEECTTSCEEECCCSCCS
T ss_pred             HHHHHHHHHHHHHHhcC--CCCCCccEEEecCCCEEEEeehhhh
Confidence            55554432222233454  6888999999999999999999873


No 289
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=55.42  E-value=16  Score=38.27  Aligned_cols=46  Identities=28%  Similarity=0.356  Sum_probs=33.4

Q ss_pred             HHHHHHHHHHHHH--HHHHHHHCCccccCCCCCcEEEcCCCCeEEeecccee
Q 012062           97 VPQIKCYMKQLLT--GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR  146 (472)
Q Consensus        97 ~~~i~~i~~Qll~--aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~  146 (472)
                      .....+|+++++.  .+.|+  .||  +|=+++||||+.+|++.-+|||.+.
T Consensus       454 ~~a~~nF~~S~A~ySvv~YI--LGi--gDRH~~NILld~tG~v~HIDFG~~f  501 (614)
T 3ls8_A          454 AEVMDTYVKSCAGYCVITYI--LGV--GDRHLDNLLLTKTGKLFHIDFGYIL  501 (614)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH--HTC--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred             HHHHHHHHHHHHHHhHhhee--eec--cCCCCcceeEcCCCCEeeeehHHhh
Confidence            3445667777653  34444  344  4778999999999999999999873


No 290
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=52.96  E-value=17  Score=40.26  Aligned_cols=29  Identities=34%  Similarity=0.481  Sum_probs=24.2

Q ss_pred             HCCccccCCCCCcEEEcCCCCeEEeecccee
Q 012062          116 VNQVLHRDIKGSNLLIDNEGNLKLADFGLAR  146 (472)
Q Consensus       116 ~~giiHrDLKp~NILl~~~~~vkL~DFG~a~  146 (472)
                      -.||  +|=+++||||+.+|++.-+|||.+.
T Consensus       800 ILGi--gDRH~~NILid~tG~v~HIDFG~~f  828 (961)
T 1e7u_A          800 VLGI--GDRHNDNIMISETGNLFHIDFGHIL  828 (961)
T ss_dssp             HTTC--CCCCGGGEEEETTCCEEECCCCCC-
T ss_pred             Hccc--cCCCCcceEEecCCCEEEEeehhhh
Confidence            3454  6788999999999999999999874


No 291
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=51.89  E-value=55  Score=30.49  Aligned_cols=86  Identities=13%  Similarity=0.009  Sum_probs=50.2

Q ss_pred             CCCEEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCC--ccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCCCh
Q 012062            7 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHEN--VIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDL   84 (472)
Q Consensus         7 tg~~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpn--Iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g~l   84 (472)
                      +|+.++||+.+....   ....+..|+.+++.|....  +.+++..  +...         .....+..++|||+++|..
T Consensus        48 ~g~~~vlK~~~~~~~---~~~~~~~E~~~~~~L~~~g~~vp~~~~~--~g~~---------~~~~~g~~~~l~~~i~G~~  113 (328)
T 1zyl_A           48 DRRRFVVKFYRPERW---TADQILEEHQFALQLVNDEVPVAAPVAF--NGQT---------LLNHQGFYFAVFPSVGGRQ  113 (328)
T ss_dssp             TCCCEEEEEECTTTS---CHHHHHHHHHHHHHHHHTTCSBCCCCCB--TTBS---------CEEETTEEEEEEECCCCEE
T ss_pred             CCCEEEEEEcCCCCC---CHHHHHHHHHHHHHHHHcCCeecceeec--CCcE---------EEEECCEEEEEEEecCCCC
Confidence            466799999863321   2345667999988885322  3444432  1100         0012456789999999853


Q ss_pred             hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 012062           85 TGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN  117 (472)
Q Consensus        85 ~~~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~  117 (472)
                      ...       .+.    ..+.++...|.-||..
T Consensus       114 ~~~-------~~~----~~~~~~g~~La~lH~~  135 (328)
T 1zyl_A          114 FEA-------DNI----DQMEAVGRYLGRMHQT  135 (328)
T ss_dssp             CCS-------SCH----HHHHHHHHHHHHHHHH
T ss_pred             CCC-------CCH----HHHHHHHHHHHHHHHh
Confidence            221       122    2356778888888865


No 292
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=50.56  E-value=16  Score=40.45  Aligned_cols=41  Identities=22%  Similarity=0.263  Sum_probs=29.4

Q ss_pred             HHHHHHHH--HHHHHHHCCccccCCCCCcEEEcCCCCeEEeecccee
Q 012062          102 CYMKQLLT--GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR  146 (472)
Q Consensus       102 ~i~~Qll~--aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~  146 (472)
                      .|+++++-  .+.|+  .||  +|=+++||||+.+|++.-+|||.+.
T Consensus       770 ~F~~S~A~~Svv~YI--LGl--gDRH~~NILid~tG~v~HIDFG~~f  812 (940)
T 2wxf_A          770 EFTLSCAGYCVATYV--LGI--GDRHSDNIMIRESGQLFHIDFGHFL  812 (940)
T ss_dssp             HHHHHHHHHHHHHHH--HTC--CCCCGGGEEEETTSCEEECCCCCCT
T ss_pred             HHHHHHHHHHHHHHH--hcc--CCCCcccEEEecCCCEEEEeehhhh
Confidence            35555442  33344  333  5888999999999999999999863


No 293
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=42.82  E-value=28  Score=38.93  Aligned_cols=42  Identities=19%  Similarity=0.323  Sum_probs=31.0

Q ss_pred             HHHHHHHHH--HHHHHHHCCccccCCCCCcEEEcCCCCeEEeecccee
Q 012062          101 KCYMKQLLT--GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR  146 (472)
Q Consensus       101 ~~i~~Qll~--aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~  146 (472)
                      .+|+++++.  .+.|+  .||  +|=.++||||+.+|++.-+|||.+.
T Consensus       918 ~nF~~S~A~ysvv~Yi--Lgi--gDRH~~NILid~tG~v~HIDFG~~f  961 (1091)
T 3hhm_A          918 DLFTRSCAGYCVATFI--LGI--GDRHNSNIMVKDDGQLFHIDFGHFL  961 (1091)
T ss_dssp             HHHHHHHHHHHHHHHH--HTC--CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred             HHHHHHhhhhhheEEE--Eee--cCCCCcceEEeCCCCEEEEeehhhh
Confidence            456666553  34444  344  5778999999999999999999873


No 294
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=42.02  E-value=80  Score=29.92  Aligned_cols=82  Identities=13%  Similarity=0.050  Sum_probs=46.8

Q ss_pred             EEEEEEeecCCcCCCchhhHHHHHHHHHhcCCCC---ccceeEEeeCCCCCCCCCCCCCCCCcCCeEEEEEecCCCChhh
Q 012062           10 IVALKKIRMDNEKEGFPITAIREIKILKKLQHEN---VIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTG   86 (472)
Q Consensus        10 ~vAlK~i~~~~~~~~~~~~~~~Ei~il~~l~hpn---Iv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iVmEy~~g~l~~   86 (472)
                      .++||+.+....        ..|+.+++.|....   |.+++.....   .       ......+..++||||++|....
T Consensus        48 ~~vLK~~~~~~~--------~~E~~~l~~L~~~g~~~vp~pi~~~~G---~-------~~~~~~g~~~~l~~~i~G~~~~  109 (339)
T 3i1a_A           48 SYFIKLKYGYHD--------EINLSIIRLLHDSGIKEIIFPIHTLEA---K-------LFQQLKHFKIIAYPFIHAPNGF  109 (339)
T ss_dssp             EEEEEEEECSSC--------CHHHHHHHHHHHTTCCSSCCCCCCTTS---C-------SSEECSSEEEEEEECCCCCBTT
T ss_pred             CEEEEEecCccc--------hHHHHHHHHHHhcCCcccccceecCCC---C-------EEEEECCEEEEEEeccCCCcCc
Confidence            889998764331        36777777764222   3444322100   0       0011246789999999985431


Q ss_pred             hhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 012062           87 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ  118 (472)
Q Consensus        87 ~~~~~~~~l~~~~i~~i~~Qll~aL~~LH~~g  118 (472)
                      .     ..++..+    +.++...|+-||...
T Consensus       110 ~-----~~~~~~~----~~~lg~~La~LH~~~  132 (339)
T 3i1a_A          110 T-----QNLTGKQ----WKQLGKVLRQIHETS  132 (339)
T ss_dssp             T-----SCCCHHH----HHHHHHHHHHHHTCC
T ss_pred             c-----cCCCHHH----HHHHHHHHHHHhCcC
Confidence            1     1234333    457888899999875


No 295
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=39.97  E-value=6  Score=38.63  Aligned_cols=9  Identities=11%  Similarity=0.080  Sum_probs=4.0

Q ss_pred             HHHHHHHhh
Q 012062          257 ALELLEKML  265 (472)
Q Consensus       257 ~~~ll~~~L  265 (472)
                      +..|+..+|
T Consensus       174 A~~ll~~sl  182 (358)
T 2pk2_A          174 SYFMATNSL  182 (358)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHH
Confidence            344444444


No 296
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=27.54  E-value=61  Score=31.14  Aligned_cols=72  Identities=17%  Similarity=0.182  Sum_probs=40.6

Q ss_pred             CeEEEEEecCCCCh-hhhhcCC-CCCCCHHHHHHHHHHH--HHHHHHHHHCC--c--c-ccCCCCCcEEEcCCCC-eEEe
Q 012062           71 GSTYMVFEYMDHDL-TGLADRP-GLRFTVPQIKCYMKQL--LTGLHYCHVNQ--V--L-HRDIKGSNLLIDNEGN-LKLA  140 (472)
Q Consensus        71 ~~~~iVmEy~~g~l-~~~~~~~-~~~l~~~~i~~i~~Ql--l~aL~~LH~~g--i--i-HrDLKp~NILl~~~~~-vkL~  140 (472)
                      +.+.++|||+.|.. ...-... ...+.+..    +++|  +-+++.+..+.  .  + +.--.++|||++.++. +.++
T Consensus       155 ~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~I  230 (342)
T 1cja_A          155 QANILLMELVRGITLNKLTTTSAPEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPI  230 (342)
T ss_dssp             CSEEEEEECCCEEESTTCCSSSHHHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEEC
T ss_pred             ccceehhhhcCCCccccchhhhhhhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEE
Confidence            35679999998732 2221110 00132222    3332  45667776662  1  1 1125789999987555 8899


Q ss_pred             ecccee
Q 012062          141 DFGLAR  146 (472)
Q Consensus       141 DFG~a~  146 (472)
                      |-+++.
T Consensus       231 Dhn~af  236 (342)
T 1cja_A          231 DSKIIP  236 (342)
T ss_dssp             SCCCCC
T ss_pred             cCCccc
Confidence            988774


No 297
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=25.45  E-value=1.9e+02  Score=29.59  Aligned_cols=54  Identities=9%  Similarity=0.126  Sum_probs=47.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEcCCCCeEEeeccceeee
Q 012062           95 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF  148 (472)
Q Consensus        95 l~~~~i~~i~~Qll~aL~~LH~~giiHrDLKp~NILl~~~~~vkL~DFG~a~~~  148 (472)
                      -+.+++...+..--.||.-|-..+|.-+|.-..|+=|+..|+|..=|+.-.+.+
T Consensus       429 a~~~~~~~av~eYG~AIKqLAaANIFPGDML~KNFGVTRhgRVVFYDYDEI~yl  482 (578)
T 3eps_A          429 VEGQQLRDAIEEYGNAIRQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEICYM  482 (578)
T ss_dssp             CCTHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEES
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCccccceEEEecccceeee
Confidence            356788888999999999999999999999999999999999999999765543


No 298
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=24.76  E-value=53  Score=32.41  Aligned_cols=8  Identities=25%  Similarity=0.252  Sum_probs=4.2

Q ss_pred             CCHHHHhc
Q 012062          273 ISAKDALD  280 (472)
Q Consensus       273 ~t~~elL~  280 (472)
                      .|++++|+
T Consensus       355 ~~~eeal~  362 (449)
T 3iot_A          355 QTVDAALA  362 (449)
T ss_dssp             SCHHHHHH
T ss_pred             CCHHHHHH
Confidence            45555553


No 299
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=24.58  E-value=10  Score=38.37  Aligned_cols=45  Identities=13%  Similarity=0.036  Sum_probs=10.2

Q ss_pred             CEEEE------EEeecCCcCCCchhhHHHHHHHHHhcCCCCccceeEEeeC
Q 012062            9 EIVAL------KKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTS   53 (472)
Q Consensus         9 ~~vAl------K~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~   53 (472)
                      ..||+      |..+.....++....+.+|..+++.++|+|+++.+.+...
T Consensus       165 ~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          165 MPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             CchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            46777      6655433333344567789999999999999999887653


No 300
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=21.40  E-value=7.4  Score=39.51  Aligned_cols=28  Identities=18%  Similarity=0.088  Sum_probs=24.0

Q ss_pred             hhhHHHHHHHHHhcCCCCccceeEEeeC
Q 012062           26 PITAIREIKILKKLQHENVIKLKEIVTS   53 (472)
Q Consensus        26 ~~~~~~Ei~il~~l~hpnIv~l~~~~~~   53 (472)
                      ...+..|++++.+++|+|||++++||..
T Consensus       323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s  350 (487)
T 3oja_A          323 SETERLECERENQARQREIDALKEQYRT  350 (487)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHhcccccchhhHHHHhcC
Confidence            4467899999999999999999998865


Done!