Query 012063
Match_columns 471
No_of_seqs 166 out of 1430
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 20:53:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012063.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012063hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1.3E-72 4.6E-77 557.1 38.1 430 4-468 12-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 3.5E-69 1.2E-73 541.8 44.6 460 1-469 1-469 (480)
3 2acv_A Triterpene UDP-glucosyl 100.0 2.7E-64 9.4E-69 504.4 38.7 437 4-468 8-462 (463)
4 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 4.3E-64 1.5E-68 506.7 36.8 441 4-470 7-480 (482)
5 2c1x_A UDP-glucose flavonoid 3 100.0 1.5E-63 5.2E-68 497.7 36.3 433 1-469 1-452 (456)
6 2iya_A OLEI, oleandomycin glyc 100.0 1.7E-44 5.9E-49 359.4 32.1 391 4-468 11-421 (424)
7 4amg_A Snogd; transferase, pol 100.0 4.3E-45 1.5E-49 361.1 24.1 344 4-448 21-384 (400)
8 1iir_A Glycosyltransferase GTF 100.0 7.8E-42 2.7E-46 339.1 28.7 351 6-447 1-383 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 1.2E-40 4.2E-45 330.7 28.3 352 6-448 1-385 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 8.6E-40 2.9E-44 324.7 29.0 377 4-467 19-412 (415)
11 3ia7_A CALG4; glycosysltransfe 100.0 1.1E-38 3.9E-43 315.1 30.5 373 5-467 4-397 (402)
12 2yjn_A ERYCIII, glycosyltransf 100.0 8.7E-38 3E-42 312.5 33.5 371 4-465 19-432 (441)
13 3h4t_A Glycosyltransferase GTF 100.0 6.6E-39 2.3E-43 316.6 23.5 354 6-466 1-380 (404)
14 2p6p_A Glycosyl transferase; X 100.0 1.2E-37 4.2E-42 305.9 26.7 351 6-463 1-374 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 3.5E-37 1.2E-41 307.3 30.3 373 5-464 7-395 (430)
16 4fzr_A SSFS6; structural genom 100.0 2.3E-35 7.7E-40 291.1 24.1 351 4-462 14-394 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 5.8E-35 2E-39 288.2 24.4 345 4-463 19-392 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 9.3E-33 3.2E-37 271.8 29.3 351 5-464 1-384 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 4.1E-31 1.4E-35 261.9 31.1 356 4-465 19-405 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 7.9E-28 2.7E-32 233.5 25.7 308 6-430 3-325 (365)
21 2o6l_A UDP-glucuronosyltransfe 100.0 2.1E-28 7.3E-33 211.4 15.3 164 251-447 5-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 1.5E-19 5.1E-24 175.5 27.5 343 1-470 2-357 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.7 1.1E-16 3.6E-21 141.5 8.6 132 265-426 26-196 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.5 4E-13 1.4E-17 123.8 19.4 116 267-408 157-274 (282)
25 1v4v_A UDP-N-acetylglucosamine 99.3 3.9E-11 1.3E-15 116.5 14.9 106 339-465 255-363 (376)
26 3okp_A GDP-mannose-dependent a 99.2 1.9E-08 6.4E-13 97.9 28.3 348 4-469 3-378 (394)
27 3c48_A Predicted glycosyltrans 99.1 1.4E-08 4.6E-13 100.6 25.8 80 338-429 305-391 (438)
28 3dzc_A UDP-N-acetylglucosamine 99.1 3E-10 1E-14 110.9 13.3 103 339-462 288-393 (396)
29 3ot5_A UDP-N-acetylglucosamine 99.1 7.1E-10 2.4E-14 108.4 13.9 108 339-467 282-392 (403)
30 2r60_A Glycosyl transferase, g 99.1 2.6E-08 9.1E-13 100.4 24.4 80 338-429 334-424 (499)
31 1vgv_A UDP-N-acetylglucosamine 99.1 1.3E-09 4.6E-14 105.9 14.3 106 339-465 263-371 (384)
32 3fro_A GLGA glycogen synthase; 99.1 2E-07 6.8E-12 92.0 29.7 110 339-469 311-429 (439)
33 2gek_A Phosphatidylinositol ma 99.1 9.5E-08 3.2E-12 93.3 27.1 111 338-467 262-380 (406)
34 2jjm_A Glycosyl transferase, g 99.0 4.6E-07 1.6E-11 88.2 30.5 111 339-468 267-383 (394)
35 3beo_A UDP-N-acetylglucosamine 98.9 3E-08 1E-12 95.9 18.0 106 339-465 263-371 (375)
36 2iw1_A Lipopolysaccharide core 98.9 1.9E-06 6.4E-11 83.0 28.6 136 267-439 195-344 (374)
37 2iuy_A Avigt4, glycosyltransfe 98.8 2.3E-07 7.8E-12 88.5 19.9 126 270-428 164-307 (342)
38 4hwg_A UDP-N-acetylglucosamine 98.8 2E-08 6.7E-13 97.3 9.4 158 267-466 203-373 (385)
39 2x6q_A Trehalose-synthase TRET 98.6 1.4E-05 4.9E-10 78.1 24.1 111 338-469 292-413 (416)
40 1rzu_A Glycogen synthase 1; gl 98.4 3.4E-05 1.2E-09 77.1 21.9 108 339-467 346-472 (485)
41 2vsy_A XCC0866; transferase, g 98.3 0.0019 6.6E-08 65.7 33.1 112 339-465 434-554 (568)
42 2f9f_A First mannosyl transfer 98.3 2.7E-06 9.1E-11 72.8 9.8 130 269-430 24-163 (177)
43 3s28_A Sucrose synthase 1; gly 98.2 1.9E-05 6.4E-10 83.1 15.3 77 339-427 640-728 (816)
44 3oy2_A Glycosyltransferase B73 98.2 0.00048 1.6E-08 67.1 24.6 108 341-468 256-388 (413)
45 2xci_A KDO-transferase, 3-deox 98.1 0.0013 4.6E-08 63.1 25.0 96 340-445 261-362 (374)
46 2hy7_A Glucuronosyltransferase 97.9 0.0021 7.2E-08 62.5 22.3 73 340-430 266-353 (406)
47 3qhp_A Type 1 capsular polysac 97.6 0.00042 1.4E-08 57.9 10.0 126 268-429 2-140 (166)
48 3q3e_A HMW1C-like glycosyltran 97.5 0.00086 2.9E-08 67.5 12.3 177 268-470 441-630 (631)
49 2bfw_A GLGA glycogen synthase; 97.4 0.0022 7.5E-08 55.3 12.8 77 340-429 96-181 (200)
50 3rhz_A GTF3, nucleotide sugar 97.1 0.00098 3.4E-08 62.9 7.8 110 340-466 215-336 (339)
51 4gyw_A UDP-N-acetylglucosamine 97.0 0.0093 3.2E-07 62.4 14.6 138 266-429 521-668 (723)
52 3tov_A Glycosyl transferase fa 96.8 0.2 6.7E-06 47.3 21.4 108 4-133 7-117 (349)
53 2qzs_A Glycogen synthase; glyc 96.6 0.014 4.8E-07 57.9 12.3 109 339-468 347-474 (485)
54 1psw_A ADP-heptose LPS heptosy 96.0 1 3.4E-05 42.1 22.4 106 6-133 1-108 (348)
55 2x0d_A WSAF; GT4 family, trans 94.0 0.13 4.4E-06 49.8 8.0 83 340-438 296-385 (413)
56 3vue_A GBSS-I, granule-bound s 87.9 2.5 8.5E-05 42.3 10.2 84 338-428 381-476 (536)
57 2gt1_A Lipopolysaccharide hept 86.8 0.38 1.3E-05 44.7 3.3 39 6-44 1-40 (326)
58 3ty2_A 5'-nucleotidase SURE; s 85.1 4.2 0.00014 36.0 8.8 41 4-47 10-50 (261)
59 3vue_A GBSS-I, granule-bound s 82.5 0.89 3E-05 45.6 4.0 38 4-44 8-53 (536)
60 4dzz_A Plasmid partitioning pr 82.3 8.6 0.00029 32.3 9.9 81 8-115 4-85 (206)
61 1uqt_A Alpha, alpha-trehalose- 80.8 9.1 0.00031 37.5 10.5 109 341-470 333-454 (482)
62 1g5t_A COB(I)alamin adenosyltr 79.6 18 0.00063 30.4 10.5 102 5-115 28-130 (196)
63 3vot_A L-amino acid ligase, BL 79.4 9.2 0.00031 36.7 10.0 98 1-128 1-100 (425)
64 3lyu_A Putative hydrogenase; t 78.6 11 0.00039 29.7 8.7 35 6-44 19-53 (142)
65 2wqk_A 5'-nucleotidase SURE; S 78.6 8.1 0.00028 34.1 8.4 38 6-47 2-40 (251)
66 3t5t_A Putative glycosyltransf 77.6 6.1 0.00021 38.8 8.0 110 340-469 353-472 (496)
67 2phj_A 5'-nucleotidase SURE; S 76.6 25 0.00085 30.9 10.8 39 6-47 2-40 (251)
68 2x0d_A WSAF; GT4 family, trans 75.2 1.8 6.2E-05 41.7 3.5 40 4-44 45-89 (413)
69 3nb0_A Glycogen [starch] synth 73.2 14 0.00049 37.7 9.4 42 343-386 497-551 (725)
70 2iz6_A Molybdenum cofactor car 72.5 27 0.00092 28.8 9.5 46 341-386 91-140 (176)
71 3bgw_A DNAB-like replicative h 71.0 8.4 0.00029 37.3 7.1 40 7-47 199-238 (444)
72 3tqr_A Phosphoribosylglycinami 70.7 30 0.001 29.6 9.7 112 1-134 1-113 (215)
73 3iqw_A Tail-anchored protein t 70.6 35 0.0012 31.5 11.0 39 5-44 15-54 (334)
74 3igf_A ALL4481 protein; two-do 68.7 21 0.0007 33.6 9.0 36 6-42 2-38 (374)
75 3ug7_A Arsenical pump-driving 66.7 70 0.0024 29.5 12.3 39 5-44 25-64 (349)
76 3lrx_A Putative hydrogenase; a 64.8 26 0.00087 28.2 7.8 37 6-46 24-60 (158)
77 4a1f_A DNAB helicase, replicat 63.7 6.3 0.00022 36.6 4.4 37 8-45 49-85 (338)
78 3io3_A DEHA2D07832P; chaperone 63.7 20 0.00068 33.4 7.8 39 4-43 16-57 (348)
79 2v4n_A Multifunctional protein 62.1 65 0.0022 28.3 10.3 39 6-47 2-40 (254)
80 3auf_A Glycinamide ribonucleot 61.9 78 0.0027 27.3 11.9 109 4-134 21-131 (229)
81 2ywr_A Phosphoribosylglycinami 61.9 67 0.0023 27.4 10.3 106 6-134 2-110 (216)
82 3bfv_A CAPA1, CAPB2, membrane 60.9 44 0.0015 29.6 9.4 40 4-44 80-121 (271)
83 2qzs_A Glycogen synthase; glyc 60.5 7.3 0.00025 38.0 4.5 37 6-43 1-43 (485)
84 2q5c_A NTRC family transcripti 60.4 28 0.00096 29.2 7.5 42 91-136 129-170 (196)
85 3dfz_A SIRC, precorrin-2 dehyd 60.4 82 0.0028 27.0 11.0 152 260-449 26-186 (223)
86 3zq6_A Putative arsenical pump 59.9 25 0.00087 32.2 7.8 37 7-44 15-52 (324)
87 2q6t_A DNAB replication FORK h 59.1 9.3 0.00032 37.0 4.8 38 7-44 202-239 (444)
88 3fgn_A Dethiobiotin synthetase 59.1 66 0.0023 28.2 10.0 39 3-42 23-63 (251)
89 2r6a_A DNAB helicase, replicat 58.6 11 0.00038 36.6 5.3 38 7-44 205-242 (454)
90 3bh0_A DNAB-like replicative h 56.9 17 0.00058 33.3 6.0 36 7-43 70-105 (315)
91 3end_A Light-independent proto 56.0 61 0.0021 29.1 9.7 38 6-44 42-79 (307)
92 3l7i_A Teichoic acid biosynthe 54.3 10 0.00034 39.5 4.4 113 343-468 603-719 (729)
93 2e6c_A 5'-nucleotidase SURE; S 52.7 77 0.0026 27.6 9.1 24 22-47 16-39 (244)
94 1j9j_A Stationary phase surviV 52.3 77 0.0026 27.7 9.1 24 22-47 16-39 (247)
95 2b8t_A Thymidine kinase; deoxy 51.3 79 0.0027 27.1 9.0 37 7-44 13-50 (223)
96 2i2c_A Probable inorganic poly 50.9 9.9 0.00034 34.0 3.3 51 359-429 37-93 (272)
97 3cio_A ETK, tyrosine-protein k 48.6 73 0.0025 28.6 8.8 39 5-44 103-143 (299)
98 1ccw_A Protein (glutamate muta 46.0 28 0.00095 27.3 4.8 37 5-42 3-39 (137)
99 1fmt_A Methionyl-tRNA FMet for 45.8 1.4E+02 0.0049 27.0 10.3 34 4-43 2-35 (314)
100 1yt5_A Inorganic polyphosphate 45.4 15 0.0005 32.6 3.5 53 355-429 41-96 (258)
101 3kcq_A Phosphoribosylglycinami 44.4 1.5E+02 0.005 25.2 10.2 105 1-135 5-113 (215)
102 2r8r_A Sensor protein; KDPD, P 42.8 27 0.00093 30.2 4.6 40 4-44 5-44 (228)
103 3dm5_A SRP54, signal recogniti 41.6 76 0.0026 30.5 8.0 41 6-47 101-141 (443)
104 3dfu_A Uncharacterized protein 41.5 17 0.00059 31.6 3.2 36 1-42 2-37 (232)
105 3lqk_A Dipicolinate synthase s 41.5 37 0.0012 28.7 5.1 45 1-46 3-47 (201)
106 2zts_A Putative uncharacterize 41.2 61 0.0021 27.7 7.0 39 7-45 32-70 (251)
107 1ydh_A AT5G11950; structural g 40.5 1E+02 0.0035 26.3 7.8 45 341-385 89-143 (216)
108 4grd_A N5-CAIR mutase, phospho 40.4 1.5E+02 0.0051 24.2 9.8 145 267-451 12-165 (173)
109 1wcv_1 SOJ, segregation protei 40.1 21 0.00072 31.3 3.7 43 1-44 1-45 (257)
110 2yxb_A Coenzyme B12-dependent 39.7 23 0.0008 28.7 3.5 38 4-42 17-54 (161)
111 3zqu_A Probable aromatic acid 39.7 42 0.0015 28.5 5.3 40 1-43 1-40 (209)
112 3av3_A Phosphoribosylglycinami 39.2 1.8E+02 0.006 24.6 11.2 107 6-134 4-112 (212)
113 1q57_A DNA primase/helicase; d 38.6 43 0.0015 32.8 6.0 38 8-45 245-282 (503)
114 3tl4_X Glutaminyl-tRNA synthet 38.1 24 0.00084 29.4 3.4 58 396-462 107-172 (187)
115 2i2x_B MTAC, methyltransferase 37.7 48 0.0016 29.2 5.6 39 4-43 122-160 (258)
116 1y80_A Predicted cobalamin bin 37.6 35 0.0012 28.9 4.5 38 4-42 87-124 (210)
117 1q1v_A DEK protein; winged-hel 37.5 94 0.0032 21.0 6.0 54 412-467 10-65 (70)
118 2l82_A Designed protein OR32; 36.7 73 0.0025 23.4 5.3 34 269-306 3-36 (162)
119 1kyq_A Met8P, siroheme biosynt 35.4 99 0.0034 27.5 7.2 89 355-450 106-211 (274)
120 3da8_A Probable 5'-phosphoribo 34.9 1.8E+02 0.0061 24.7 8.5 110 3-135 10-120 (215)
121 1id1_A Putative potassium chan 34.9 27 0.00092 27.7 3.2 32 5-42 3-34 (153)
122 3g1w_A Sugar ABC transporter; 34.7 1.6E+02 0.0054 25.9 8.9 29 105-133 61-93 (305)
123 1qkk_A DCTD, C4-dicarboxylate 34.6 93 0.0032 24.0 6.5 64 376-448 74-137 (155)
124 1xp8_A RECA protein, recombina 33.5 1.8E+02 0.0061 27.0 9.0 40 7-47 76-115 (366)
125 3k96_A Glycerol-3-phosphate de 33.5 24 0.00084 32.9 3.1 36 1-42 25-60 (356)
126 3pnx_A Putative sulfurtransfer 33.4 48 0.0016 26.8 4.4 41 1-43 2-42 (160)
127 3mcu_A Dipicolinate synthase, 32.9 43 0.0015 28.4 4.2 43 1-45 1-44 (207)
128 1qzu_A Hypothetical protein MD 32.5 48 0.0016 28.1 4.4 41 3-44 17-57 (206)
129 3hr8_A Protein RECA; alpha and 32.4 2.4E+02 0.0084 26.0 9.7 40 7-47 63-102 (356)
130 1o97_C Electron transferring f 30.8 52 0.0018 29.1 4.6 31 105-135 112-148 (264)
131 1mvl_A PPC decarboxylase athal 30.8 59 0.002 27.6 4.7 37 5-44 19-55 (209)
132 1pjq_A CYSG, siroheme synthase 30.2 1.4E+02 0.0049 28.6 8.1 90 351-449 68-168 (457)
133 3qjg_A Epidermin biosynthesis 30.2 66 0.0023 26.4 4.8 37 6-44 6-42 (175)
134 1efv_B Electron transfer flavo 29.8 55 0.0019 28.8 4.6 31 105-135 116-152 (255)
135 2an1_A Putative kinase; struct 29.8 23 0.0008 31.8 2.2 30 354-385 62-95 (292)
136 1eiw_A Hypothetical protein MT 29.8 84 0.0029 23.5 4.9 65 353-428 36-109 (111)
137 3ezx_A MMCP 1, monomethylamine 29.7 56 0.0019 27.8 4.5 38 4-42 91-128 (215)
138 3gl9_A Response regulator; bet 29.7 88 0.003 23.0 5.3 34 102-135 43-85 (122)
139 2qyt_A 2-dehydropantoate 2-red 29.6 22 0.00075 32.2 2.0 36 1-42 4-45 (317)
140 3k9g_A PF-32 protein; ssgcid, 29.5 48 0.0016 29.0 4.2 41 1-43 22-64 (267)
141 1ydn_A Hydroxymethylglutaryl-C 29.1 3E+02 0.01 24.3 9.7 25 280-304 23-47 (295)
142 1p3y_1 MRSD protein; flavoprot 29.0 1.2E+02 0.0042 25.2 6.4 138 272-429 11-186 (194)
143 1sbz_A Probable aromatic acid 28.8 69 0.0024 26.9 4.8 36 6-43 1-37 (197)
144 1f0y_A HCDH, L-3-hydroxyacyl-C 28.8 35 0.0012 30.7 3.3 35 1-41 11-45 (302)
145 1efp_B ETF, protein (electron 28.6 55 0.0019 28.7 4.3 31 105-135 113-149 (252)
146 4b4o_A Epimerase family protei 28.3 42 0.0014 29.9 3.7 32 6-42 1-32 (298)
147 1jkx_A GART;, phosphoribosylgl 27.9 2.7E+02 0.0093 23.4 11.8 107 6-134 1-109 (212)
148 1u0t_A Inorganic polyphosphate 26.8 24 0.00083 32.1 1.7 31 353-385 73-107 (307)
149 4g6h_A Rotenone-insensitive NA 26.4 43 0.0015 32.8 3.6 34 4-43 41-74 (502)
150 4dim_A Phosphoribosylglycinami 26.4 1.6E+02 0.0056 27.4 7.7 33 4-42 6-38 (403)
151 2qx0_A 7,8-dihydro-6-hydroxyme 26.3 95 0.0033 25.0 5.0 28 269-296 3-30 (159)
152 1f9y_A HPPK, protein (6-hydrox 26.2 75 0.0026 25.6 4.3 28 269-296 2-29 (158)
153 3afo_A NADH kinase POS5; alpha 26.2 41 0.0014 31.7 3.2 59 349-429 108-171 (388)
154 2q37_A OHCU decarboxylase; 2-O 26.1 1.8E+02 0.0063 23.9 6.8 54 390-447 118-171 (181)
155 1u94_A RECA protein, recombina 25.8 2.3E+02 0.008 26.1 8.4 40 7-47 65-104 (356)
156 1lss_A TRK system potassium up 24.9 62 0.0021 24.6 3.7 32 5-42 4-35 (140)
157 3s40_A Diacylglycerol kinase; 24.9 81 0.0028 28.4 4.9 27 360-386 66-98 (304)
158 3kjh_A CO dehydrogenase/acetyl 24.6 55 0.0019 28.0 3.7 38 6-44 1-38 (254)
159 3llv_A Exopolyphosphatase-rela 24.6 43 0.0015 25.9 2.6 36 1-42 1-37 (141)
160 2o8i_A AGR_C_4230P, hypothetic 24.5 2.1E+02 0.0071 23.1 6.8 54 390-447 102-155 (165)
161 3o7i_A OHCU decarboxylase; lya 24.4 2.1E+02 0.0071 23.7 6.8 55 389-447 126-180 (189)
162 3ip0_A 2-amino-4-hydroxy-6-hyd 24.2 85 0.0029 25.2 4.3 28 269-296 2-29 (158)
163 3ci9_A Heat shock factor-bindi 24.1 61 0.0021 20.2 2.6 42 415-461 3-44 (48)
164 3mc3_A DSRE/DSRF-like family p 23.7 99 0.0034 23.9 4.6 28 15-43 28-55 (134)
165 3ors_A N5-carboxyaminoimidazol 23.6 2.9E+02 0.0099 22.2 8.9 141 269-450 5-155 (163)
166 4e5s_A MCCFLIKE protein (BA_56 23.5 1.2E+02 0.0042 27.7 5.8 29 279-307 61-89 (331)
167 3l49_A ABC sugar (ribose) tran 23.5 3.5E+02 0.012 23.2 9.8 29 105-133 61-93 (291)
168 1t35_A Hypothetical protein YV 23.4 1.8E+02 0.0063 24.0 6.5 44 342-385 82-135 (191)
169 3qbc_A 2-amino-4-hydroxy-6-hyd 23.3 92 0.0032 25.1 4.3 28 269-296 6-33 (161)
170 1cbk_A Protein (7,8-dihydro-6- 23.2 92 0.0032 25.1 4.3 28 269-296 3-30 (160)
171 3qjg_A Epidermin biosynthesis 23.1 2.3E+02 0.0078 23.1 6.8 112 269-403 8-142 (175)
172 3icc_A Putative 3-oxoacyl-(acy 23.1 3.4E+02 0.012 22.9 10.5 35 5-43 6-40 (255)
173 1tjn_A Sirohydrochlorin cobalt 22.9 94 0.0032 24.8 4.4 29 267-295 25-53 (156)
174 3o1l_A Formyltetrahydrofolate 22.6 4.2E+02 0.014 23.7 10.7 107 2-135 102-212 (302)
175 2qv7_A Diacylglycerol kinase D 22.6 79 0.0027 29.0 4.4 27 360-386 83-115 (337)
176 2a33_A Hypothetical protein; s 22.4 1.9E+02 0.0066 24.5 6.5 44 342-385 94-147 (215)
177 3g0o_A 3-hydroxyisobutyrate de 22.3 49 0.0017 29.8 2.9 32 4-41 6-37 (303)
178 3li6_A Calcium-binding protein 22.2 1.5E+02 0.0052 18.5 5.0 55 407-469 10-64 (66)
179 2g1u_A Hypothetical protein TM 22.1 87 0.003 24.6 4.1 33 4-42 18-50 (155)
180 2vou_A 2,6-dihydroxypyridine h 22.1 68 0.0023 30.0 4.0 35 1-41 1-35 (397)
181 3ahc_A Phosphoketolase, xylulo 22.0 5.9E+02 0.02 26.7 11.0 83 360-455 726-813 (845)
182 3qvl_A Putative hydantoin race 22.0 3.8E+02 0.013 23.0 10.6 37 6-43 2-39 (245)
183 4hb9_A Similarities with proba 22.0 61 0.0021 30.2 3.7 30 5-40 1-30 (412)
184 2etv_A Iron(III) ABC transport 21.6 82 0.0028 28.9 4.4 29 105-133 96-125 (346)
185 3s2u_A UDP-N-acetylglucosamine 21.6 1.4E+02 0.0047 27.6 6.0 26 355-382 92-120 (365)
186 1o4v_A Phosphoribosylaminoimid 21.4 3.4E+02 0.012 22.3 11.4 142 268-451 14-164 (183)
187 4ds3_A Phosphoribosylglycinami 21.4 1.2E+02 0.0041 25.6 5.0 42 91-132 19-63 (209)
188 2o70_A OHCU decarboxylase; URI 21.2 2E+02 0.0069 23.4 6.1 55 389-447 105-159 (174)
189 3pfn_A NAD kinase; structural 21.0 47 0.0016 31.0 2.5 55 352-429 105-164 (365)
190 2gk4_A Conserved hypothetical 20.8 68 0.0023 27.7 3.3 26 16-44 28-53 (232)
191 1v5e_A Pyruvate oxidase; oxido 20.8 1.2E+02 0.0042 30.2 5.8 27 358-384 69-101 (590)
192 2bon_A Lipid kinase; DAG kinas 20.7 1.2E+02 0.0043 27.5 5.4 30 355-386 82-119 (332)
193 3tsa_A SPNG, NDP-rhamnosyltran 20.7 88 0.003 28.9 4.5 30 355-386 114-144 (391)
194 2jk1_A HUPR, hydrogenase trans 20.5 2.2E+02 0.0074 21.2 6.1 47 377-429 72-119 (139)
195 2lpm_A Two-component response 20.5 59 0.002 24.8 2.6 30 102-131 50-84 (123)
196 3m6m_D Sensory/regulatory prot 20.3 95 0.0033 23.7 4.0 32 104-135 57-99 (143)
197 2ejb_A Probable aromatic acid 20.0 1.7E+02 0.006 24.1 5.6 36 6-43 2-37 (189)
198 3sbx_A Putative uncharacterize 20.0 3.7E+02 0.013 22.2 7.8 116 256-402 35-165 (189)
199 3pdi_B Nitrogenase MOFE cofact 20.0 1.2E+02 0.004 29.3 5.2 25 104-131 374-398 (458)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1.3e-72 Score=557.07 Aligned_cols=430 Identities=28% Similarity=0.418 Sum_probs=348.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCC--cEEEEEeCCCCCCchhhhhhhcc---CCCCeEEEEcCCCCCC---cc
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHD--ISVTFLVPTIGPPSKAITSVLQG---LPEHINHVLLPPVNFE---ED 75 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~G--h~Vt~~~~~~~~~~~~~~~~~~~---~~~~~~~~~lp~~~~~---~~ 75 (471)
.++||+++|+|++||++||+.||+.|+++ | +.|||++++.+.. .+... ...+++|+.+|+.... ..
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~-g~~~~vT~~~t~~~~~-----~~~~~~~~~~~~i~~~~ipdglp~~~~~~ 85 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATE-APKVTFSFFCTTTTND-----TLFSRSNEFLPNIKYYNVHDGLPKGYVSS 85 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHH-CTTSEEEEEECHHHHH-----HSCSSSSCCCTTEEEEECCCCCCTTCCCC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhC-CCCEEEEEEeCHHHHH-----hhhcccccCCCCceEEecCCCCCCCcccc
Confidence 47899999999999999999999999886 9 9999999863221 11111 1346999999754322 11
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHhhcC--CCccEEEeCCCCccHHHHHHHhCCceEEEecchHHHHHHHhhccccchhc
Q 012063 76 VKAEIQIVLAIKRSLSSVRDVFKSLVAS--THLMALVVDPFGTDVFDVAREFYVPSYLYFLTNALSLSLLHYMPKLDEVI 153 (471)
Q Consensus 76 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~ 153 (471)
.+....+..++....+.+++.++++.++ .++||||+|.++.|+..+|+++|||++.|++++++.++.+.+++.+.+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~ 165 (454)
T 3hbf_A 86 GNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKT 165 (454)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTC
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhc
Confidence 1222333444444556677777776443 58999999999999999999999999999999999999888876654432
Q ss_pred cccccCCCCccc-CCCCCcCccCCCCCCCcc-CcCchHHHHHHHHHhhcccCcEEEEccccccChHHHHHhhcCCCCCCe
Q 012063 154 SCEVRDMEQPLK-LPGFTIPIHGRDFPDPLQ-DRKNDAYRFMIQIRKRYSLADGILINTFMELEPGVIKALQEEPSMRSI 231 (471)
Q Consensus 154 ~~~~~~~~~~~~-~p~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~v 231 (471)
.........++. +||+ .+++..+++..+. +.....+..+.+..+...+++++++||+++||+++.+.+++..+ ++
T Consensus 166 ~~~~~~~~~~~~~iPg~-p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~--~v 242 (454)
T 3hbf_A 166 GSKEVHDVKSIDVLPGF-PELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFK--LL 242 (454)
T ss_dssp CHHHHTTSSCBCCSTTS-CCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSS--CE
T ss_pred CCCccccccccccCCCC-CCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcCC--CE
Confidence 111111123343 7999 7889999998875 33344566666777888889999999999999999988887654 89
Q ss_pred EEeccCcCCCCCCCccCCCCccccchhhhhccCCCccEEEEEeCCCcCCCHHhHHHHHHHHHhCCCceEEEEecCCCCCC
Q 012063 232 YPIGPIIRTVSDGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGGTLSYDQLEELALGLELSEQQFLWVVKSPDDKSA 311 (471)
Q Consensus 232 ~~vGpl~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~ 311 (471)
++|||++...... ....+.+|.+||+.++++++|||||||+...+.+++.+++++|+.++++|||+++....
T Consensus 243 ~~vGPl~~~~~~~-----~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~~--- 314 (454)
T 3hbf_A 243 LNVGPFNLTTPQR-----KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPK--- 314 (454)
T ss_dssp EECCCHHHHSCCS-----CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCHH---
T ss_pred EEECCcccccccc-----cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcch---
Confidence 9999998654321 02335689999999888999999999998888999999999999999999999986432
Q ss_pred CCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcchhhhhcCCcccccccccCchhHHHHHhhCCceeeccccccchh
Q 012063 312 SGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIAWPLYAEQRL 391 (471)
Q Consensus 312 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~ 391 (471)
..+|++|.++.+ +|+.+++|+||.+||+|+++++|||||||||++|++++|||||++|+++||+.
T Consensus 315 --------------~~lp~~~~~~~~-~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~ 379 (454)
T 3hbf_A 315 --------------EKLPKGFLERTK-TKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGL 379 (454)
T ss_dssp --------------HHSCTTHHHHTT-TTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred --------------hcCCHhHHhhcC-CceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHH
Confidence 347888887765 46667799999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHH
Q 012063 392 NAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVHKWK 468 (471)
Q Consensus 392 na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 468 (471)
||+++++.+|+|+.+.... +++++|.++|+++|+++++++||+||+++++.+++++++||||++++++|+++|.
T Consensus 380 Na~~v~~~~g~Gv~l~~~~---~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 380 NTILTESVLEIGVGVDNGV---LTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHHHHHTTSCSEEECGGGS---CCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhCeeEEecCCC---CCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 9999999459999998766 9999999999999988567799999999999999999999999999999999985
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=3.5e-69 Score=541.83 Aligned_cols=460 Identities=55% Similarity=0.980 Sum_probs=343.5
Q ss_pred CCC-CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCC--CCchhhhhhhccCCCCeEEEEcCCCCCC---c
Q 012063 1 MAQ-VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIG--PPSKAITSVLQGLPEHINHVLLPPVNFE---E 74 (471)
Q Consensus 1 m~~-~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~--~~~~~~~~~~~~~~~~~~~~~lp~~~~~---~ 74 (471)
|+. +++||+++|+|++||++||++||++|++|+||+|||++++.+ .. .........+.+++|+.+|..... .
T Consensus 1 M~~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~--~~~~~~~~~~~~i~~~~l~~~~~~~~~~ 78 (480)
T 2vch_A 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSK--AQRTVLDSLPSSISSVFLPPVDLTDLSS 78 (480)
T ss_dssp -----CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC---CHHHHHC-CCTTEEEEECCCCCCTTSCT
T ss_pred CCCCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhh--hhhhhccccCCCceEEEcCCCCCCCCCC
Confidence 665 458999999999999999999999997633999999998763 22 122211111347999999864321 1
Q ss_pred chhHHHHHHHHHHHhHHHHHHHHHHhhcCCCc-cEEEeCCCCccHHHHHHHhCCceEEEecchHHHHHHHhhccccchhc
Q 012063 75 DVKAEIQIVLAIKRSLSSVRDVFKSLVASTHL-MALVVDPFGTDVFDVAREFYVPSYLYFLTNALSLSLLHYMPKLDEVI 153 (471)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~ 153 (471)
.......+........+.++++++++....++ ||||+|.++.|+..+|+++|||++.+++++++..+.+.+++...+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 158 (480)
T 2vch_A 79 STRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETV 158 (480)
T ss_dssp TCCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHC
T ss_pred chhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcC
Confidence 11222223333444556666666654333578 99999999999999999999999999999988777776666443322
Q ss_pred cccccCCCCcccCCCCCcCccCCCCCCCccCcCchHHHHHHHHHhhcccCcEEEEccccccChHHHHHhhcCCC-CCCeE
Q 012063 154 SCEVRDMEQPLKLPGFTIPIHGRDFPDPLQDRKNDAYRFMIQIRKRYSLADGILINTFMELEPGVIKALQEEPS-MRSIY 232 (471)
Q Consensus 154 ~~~~~~~~~~~~~p~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~-~~~v~ 232 (471)
..++.+...+..+|++ .|+...+++..+.++....+..+.+....+++..++++|++.++|.+....+.+..+ ..+++
T Consensus 159 ~~~~~~~~~~~~~Pg~-~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~ 237 (480)
T 2vch_A 159 SCEFRELTEPLMLPGC-VPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVY 237 (480)
T ss_dssp CSCGGGCSSCBCCTTC-CCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEE
T ss_pred CCcccccCCcccCCCC-CCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEE
Confidence 2222111223346888 677777777666555545566666666677888999999999999998888875211 13899
Q ss_pred EeccCcCCCCCCCccCCCCccccchhhhhccCCCccEEEEEeCCCcCCCHHhHHHHHHHHHhCCCceEEEEecCCCCCCC
Q 012063 233 PIGPIIRTVSDGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGGTLSYDQLEELALGLELSEQQFLWVVKSPDDKSAS 312 (471)
Q Consensus 233 ~vGpl~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 312 (471)
+|||++...... ..+..+.+|.+||+.++++++|||||||+...+.+++.+++++|+.++++|+|+++..... +.
T Consensus 238 ~vGpl~~~~~~~----~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~-~~ 312 (480)
T 2vch_A 238 PVGPLVNIGKQE----AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGI-AN 312 (480)
T ss_dssp ECCCCCCCSCSC----C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSS-TT
T ss_pred EEeccccccccc----cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccc-cc
Confidence 999998653211 0023467899999998788999999999988889999999999999999999999864310 00
Q ss_pred CccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcchhhhhcCCcccccccccCchhHHHHHhhCCceeeccccccchhh
Q 012063 313 GSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIAWPLYAEQRLN 392 (471)
Q Consensus 313 ~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~n 392 (471)
...+....+......+|+++.++++++++++.+|+||.+||+|+++++||||||||||+||+++|||||++|+++||+.|
T Consensus 313 ~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~n 392 (480)
T 2vch_A 313 SSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMN 392 (480)
T ss_dssp TTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred ccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHH
Confidence 00000000001113589999999998898887899999999999999999999999999999999999999999999999
Q ss_pred HHHH-HhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHh
Q 012063 393 AVIL-SEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVHKWKN 469 (471)
Q Consensus 393 a~~~-~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 469 (471)
|+++ ++ +|+|+.+...+++.+++++|+++|+++|+++++++||+||+++++.+++|+.+||++..++++|++++++
T Consensus 393 a~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 393 AVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 9997 57 9999999765233499999999999999866668999999999999999999999999999999999875
No 3
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=2.7e-64 Score=504.44 Aligned_cols=437 Identities=33% Similarity=0.590 Sum_probs=329.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCC-CcEEEEEeCCCCCCc--h-hhhhhhccCCCCeEEEEcCCCCCCcc---h
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRH-DISVTFLVPTIGPPS--K-AITSVLQGLPEHINHVLLPPVNFEED---V 76 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~-Gh~Vt~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~lp~~~~~~~---~ 76 (471)
+++||+++|+|++||++||++||++|++|+ ||+|||++++.+... . ..... ...+.+++|+.+|....... .
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~-~~~~~~i~~~~lp~~~~~~~~~~~ 86 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSV-LASQPQIQLIDLPEVEPPPQELLK 86 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHH-HCSCTTEEEEECCCCCCCCGGGGG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhc-ccCCCCceEEECCCCCCCcccccC
Confidence 368999999999999999999999998644 999999998765321 1 11111 11234799999986532211 1
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHhhcCCCccEEEeCCCCccHHHHHHHhCCceEEEecchHHHHHHHhhccccchhcccc
Q 012063 77 KAEIQIVLAIKRSLSSVRDVFKSLVASTHLMALVVDPFGTDVFDVAREFYVPSYLYFLTNALSLSLLHYMPKLDEVISCE 156 (471)
Q Consensus 77 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 156 (471)
.....+...+....+.++++++++ ...++||||+|.++.|+..+|+++|||++++++++++....+.+++.+... .+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~ll~~~-~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~--~~ 163 (463)
T 2acv_A 87 SPEFYILTFLESLIPHVKATIKTI-LSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE--EV 163 (463)
T ss_dssp SHHHHHHHHHHHTHHHHHHHHHHH-CCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT--CC
T ss_pred CccHHHHHHHHhhhHHHHHHHHhc-cCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc--CC
Confidence 111113334445556666666654 336899999999999999999999999999999999887777666654311 11
Q ss_pred ccCCCC---cccCCCCCcCccCCCCCCCccCcCchHHHHHHHHHhhcccCcEEEEccccccChHHHHHhhcCC-CCCCeE
Q 012063 157 VRDMEQ---PLKLPGFTIPIHGRDFPDPLQDRKNDAYRFMIQIRKRYSLADGILINTFMELEPGVIKALQEEP-SMRSIY 232 (471)
Q Consensus 157 ~~~~~~---~~~~p~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~-~~~~v~ 232 (471)
..+... +..+|++..++...+++..+.++ ...+..+.+.....++.+++++||++++|++..+.+.+.. +..+++
T Consensus 164 ~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~~v~ 242 (463)
T 2acv_A 164 FDDSDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIY 242 (463)
T ss_dssp CCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCCEE
T ss_pred CCCccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccCCcEE
Confidence 111111 33456762344555555444444 3455666666677788899999999999999888877632 123899
Q ss_pred EeccCcCCCC-CCCccCCCCccccchhhhhccCCCccEEEEEeCCCc-CCCHHhHHHHHHHHHhCCCceEEEEecCCCCC
Q 012063 233 PIGPIIRTVS-DGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGG-TLSYDQLEELALGLELSEQQFLWVVKSPDDKS 310 (471)
Q Consensus 233 ~vGpl~~~~~-~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~-~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~ 310 (471)
+|||++.... ... ..++..+.+|.+||+.++++++|||||||+. ....+++.+++++|+..+++|+|+++.+.
T Consensus 243 ~vGpl~~~~~~~~~--~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~--- 317 (463)
T 2acv_A 243 AVGPLLDLKGQPNP--KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEK--- 317 (463)
T ss_dssp ECCCCCCSSCCCBT--TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCG---
T ss_pred EeCCCccccccccc--ccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCc---
Confidence 9999986542 100 0001345688999999888899999999998 78888899999999999999999997631
Q ss_pred CCCccccCCCCCCCCCCCChhhHHhhc-CCCeeeccCcchhhhhcCCcccccccccCchhHHHHHhhCCceeeccccccc
Q 012063 311 ASGSFFDVHSKTDPFGFLPTGFLDRTK-EQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIAWPLYAEQ 389 (471)
Q Consensus 311 ~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ 389 (471)
..+|+++.++.. ++++.+++|+||.++|+|+++++|||||||||++||+++|||||++|+++||
T Consensus 318 ---------------~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ 382 (463)
T 2acv_A 318 ---------------KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQ 382 (463)
T ss_dssp ---------------GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTH
T ss_pred ---------------ccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhh
Confidence 136777777651 3466777899999999999999999999999999999999999999999999
Q ss_pred hhhHHHH-Hhhhcceeec-CCCCCC--ccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHH
Q 012063 390 RLNAVIL-SEDLNVALRP-PEYENG--LIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVH 465 (471)
Q Consensus 390 ~~na~~~-~~~~G~g~~~-~~~~~~--~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 465 (471)
+.||+++ ++ +|+|+.+ ...+.+ .+++++|.++|+++|++ +++||+||+++++.+++|+.+||||++++++|++
T Consensus 383 ~~Na~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~--~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~ 459 (463)
T 2acv_A 383 QLNAFRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDK--DSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLID 459 (463)
T ss_dssp HHHHHHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCT--TCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 9999995 77 9999999 311112 38999999999999962 2689999999999999999999999999999999
Q ss_pred HHH
Q 012063 466 KWK 468 (471)
Q Consensus 466 ~~~ 468 (471)
+++
T Consensus 460 ~~~ 462 (463)
T 2acv_A 460 DIT 462 (463)
T ss_dssp HHH
T ss_pred Hhc
Confidence 985
No 4
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=4.3e-64 Score=506.69 Aligned_cols=441 Identities=30% Similarity=0.492 Sum_probs=319.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhcc--C--CCCeEEEEcCCCCCCcc----
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQG--L--PEHINHVLLPPVNFEED---- 75 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~lp~~~~~~~---- 75 (471)
+++||+++|+|++||++||+.||++|++| ||+|||++++.+.. ........ . ..+++|+.+|+......
T Consensus 7 ~~~~vl~~p~p~~GHi~P~l~La~~L~~r-G~~VT~v~t~~~~~--~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~ 83 (482)
T 2pq6_A 7 RKPHVVMIPYPVQGHINPLFKLAKLLHLR-GFHITFVNTEYNHK--RLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGD 83 (482)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEEEHHHHH--HHC------------CEEEEEECCCCC-------
T ss_pred CCCEEEEecCccchhHHHHHHHHHHHHhC-CCeEEEEeCCchhh--hhccccccccccCCCceEEEECCCCCCCcccccC
Confidence 46899999999999999999999999886 99999999874321 11010000 0 12689998874221100
Q ss_pred --hhHHHHHHHHH-HHhHHHHHHHHHHhhc---CCCccEEEeCCCCccHHHHHHHhCCceEEEecchHHHHHHHhhcccc
Q 012063 76 --VKAEIQIVLAI-KRSLSSVRDVFKSLVA---STHLMALVVDPFGTDVFDVAREFYVPSYLYFLTNALSLSLLHYMPKL 149 (471)
Q Consensus 76 --~~~~~~~~~~~-~~~~~~l~~~l~~~~~---~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~ 149 (471)
.+.. .+...+ ..+.+.++++++++.. ..++||||+|.++.|+..+|+++|||++.+++++++....+.+++.+
T Consensus 84 ~~~~~~-~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 162 (482)
T 2pq6_A 84 VSQDVP-TLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSF 162 (482)
T ss_dssp --CCHH-HHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHH
T ss_pred cchhHH-HHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHH
Confidence 1111 122222 3344556666665532 25899999999999999999999999999999988776655433321
Q ss_pred chhcccccc-----CC---CCcc-cCCCCCcCccCCCCCCCccCc--CchHHHHHHHHHhhcccCcEEEEccccccChHH
Q 012063 150 DEVISCEVR-----DM---EQPL-KLPGFTIPIHGRDFPDPLQDR--KNDAYRFMIQIRKRYSLADGILINTFMELEPGV 218 (471)
Q Consensus 150 ~~~~~~~~~-----~~---~~~~-~~p~~~~p~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~ 218 (471)
......+.. .. .... .+|++ .++...+++..+... .......+.+..+...+.+++++||+++||+++
T Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~ 241 (482)
T 2pq6_A 163 VERGIIPFKDESYLTNGCLETKVDWIPGL-KNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDV 241 (482)
T ss_dssp HHTTCSSCSSGGGGTSSGGGCBCCSSTTC-CSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHH
T ss_pred HhcCCCCCccccccccccccCccccCCCC-CCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHH
Confidence 111000000 00 0111 24565 445555555443221 222333344455666788999999999999998
Q ss_pred HHHhhcCCCCCCeEEeccCcCC-CCCCC---ccC--CC-CccccchhhhhccCCCccEEEEEeCCCcCCCHHhHHHHHHH
Q 012063 219 IKALQEEPSMRSIYPIGPIIRT-VSDGE---LVD--GS-ESHQCMCIRWLDNQASGSVLFVSFGSGGTLSYDQLEELALG 291 (471)
Q Consensus 219 ~~~~~~~~~~~~v~~vGpl~~~-~~~~~---~~~--~~-~~~~~~~~~wl~~~~~~~~i~vs~GS~~~~~~~~~~~~~~a 291 (471)
.+.+++.. .++++|||++.. ..... ... .. +..+.+|.+||+.++++++|||||||+.....+++.+++++
T Consensus 242 ~~~~~~~~--~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~ 319 (482)
T 2pq6_A 242 INALSSTI--PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWG 319 (482)
T ss_dssp HHHHHTTC--TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHH
T ss_pred HHHHHHhC--CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHH
Confidence 88887654 389999999763 21100 000 00 23345689999998788999999999988888889999999
Q ss_pred HHhCCCceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcchhhhhcCCcccccccccCchhHH
Q 012063 292 LELSEQQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTL 371 (471)
Q Consensus 292 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~ 371 (471)
|+.++++|+|+++.... ......+|+++.++.. +|+.+++|+||.++|+|+++++|||||||||++
T Consensus 320 l~~~~~~~l~~~~~~~~-------------~~~~~~l~~~~~~~~~-~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~ 385 (482)
T 2pq6_A 320 LANCKKSFLWIIRPDLV-------------IGGSVIFSSEFTNEIA-DRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTT 385 (482)
T ss_dssp HHHTTCEEEEECCGGGS-------------TTTGGGSCHHHHHHHT-TTEEEESCCCHHHHHTSTTEEEEEECCCHHHHH
T ss_pred HHhcCCcEEEEEcCCcc-------------ccccccCcHhHHHhcC-CCEEEEeecCHHHHhcCCCCCEEEecCCcchHH
Confidence 99999999999986421 0011237888877764 578888999999999999999999999999999
Q ss_pred HHHhhCCceeeccccccchhhHHHHH-hhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHh
Q 012063 372 ESIVHGVPLIAWPLYAEQRLNAVILS-EDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAV 450 (471)
Q Consensus 372 eal~~GvP~l~~P~~~DQ~~na~~~~-~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~ 450 (471)
||+++|||||++|+++||+.||++++ + +|+|+.+. .+ +++++|.++|+++|+|+++++||+||+++++.+++|+
T Consensus 386 Eal~~GvP~i~~P~~~dQ~~na~~~~~~-~G~g~~l~-~~---~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~ 460 (482)
T 2pq6_A 386 ESICAGVPMLCWPFFADQPTDCRFICNE-WEIGMEID-TN---VKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENT 460 (482)
T ss_dssp HHHHHTCCEEECCCSTTHHHHHHHHHHT-SCCEEECC-SS---CCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHcCCCEEecCcccchHHHHHHHHHH-hCEEEEEC-CC---CCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999997 6 99999998 55 9999999999999998545589999999999999999
Q ss_pred hcCCCHHHHHHHHHHHHHhc
Q 012063 451 SDGGSSTKTLSQLVHKWKNQ 470 (471)
Q Consensus 451 ~~~g~~~~~~~~~~~~~~~~ 470 (471)
.+|||+++++++|++++++.
T Consensus 461 ~~gGss~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 461 RPGGCSYMNLNKVIKDVLLK 480 (482)
T ss_dssp STTCHHHHHHHHHHHHTTCC
T ss_pred hcCCcHHHHHHHHHHHHHhc
Confidence 99999999999999998653
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.5e-63 Score=497.69 Aligned_cols=433 Identities=27% Similarity=0.420 Sum_probs=319.1
Q ss_pred CCC--CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCc--EEEEEeCCCCCCchhhhhhhcc-C---CCCeEEEEcCCCCC
Q 012063 1 MAQ--VKHHVACMPSPGMGHLIPHVELAKQLVLRHDI--SVTFLVPTIGPPSKAITSVLQG-L---PEHINHVLLPPVNF 72 (471)
Q Consensus 1 m~~--~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh--~Vt~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~lp~~~~ 72 (471)
|++ .++||+++|+|++||++|+++||++|++| || .||+++++.+. ..+... . +.+++|+.+++.-.
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~r-Gh~v~vt~~~t~~~~-----~~~~~~~~~~~~~~i~~~~i~~glp 74 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAA-APHAVFSFFSTSQSN-----ASIFHDSMHTMQCNIKSYDISDGVP 74 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHH-CTTSEEEEEECHHHH-----HHHC-------CTTEEEEECCCCCC
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhC-CCCeEEEEEeCchhH-----HHhhccccccCCCceEEEeCCCCCC
Confidence 554 47899999999999999999999999886 65 56778765221 111111 1 24699998875321
Q ss_pred Cc---chhHHHHHHHHHHHhHHHHHHHHHHhhc--CCCccEEEeCCCCccHHHHHHHhCCceEEEecchHHHHHHHhhcc
Q 012063 73 EE---DVKAEIQIVLAIKRSLSSVRDVFKSLVA--STHLMALVVDPFGTDVFDVAREFYVPSYLYFLTNALSLSLLHYMP 147 (471)
Q Consensus 73 ~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p 147 (471)
.. .......+..+.......+++.++++.+ ..+|||||+|.++.|+..+|+++|||++.+++++++.++.+.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 154 (456)
T 2c1x_A 75 EGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYID 154 (456)
T ss_dssp TTCCCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHH
T ss_pred CcccccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhH
Confidence 10 1111222222233333456666665543 258999999999999999999999999999999887766554433
Q ss_pred ccchhccccc--cCCCCcc-cCCCCCcCccCCCCCCCccC-cCc-hHHHHHHHHHhhcccCcEEEEccccccChHHHHHh
Q 012063 148 KLDEVISCEV--RDMEQPL-KLPGFTIPIHGRDFPDPLQD-RKN-DAYRFMIQIRKRYSLADGILINTFMELEPGVIKAL 222 (471)
Q Consensus 148 ~~~~~~~~~~--~~~~~~~-~~p~~~~p~~~~~l~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~ 222 (471)
.+........ ....... .+|++ .+++..+++..+.. ... .....+.+.....++.+++++||++++|+++.+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pg~-~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~ 233 (456)
T 2c1x_A 155 EIREKIGVSGIQGREDELLNFIPGM-SKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDL 233 (456)
T ss_dssp HHHHHHCSSCCTTCTTCBCTTSTTC-TTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHH
T ss_pred HHHhccCCcccccccccccccCCCC-CcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHH
Confidence 3221111000 0011122 35777 56666666654421 111 22222333334567789999999999999988777
Q ss_pred hcCCCCCCeEEeccCcCCCCCCCccCCCCccccchhhhhccCCCccEEEEEeCCCcCCCHHhHHHHHHHHHhCCCceEEE
Q 012063 223 QEEPSMRSIYPIGPIIRTVSDGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGGTLSYDQLEELALGLELSEQQFLWV 302 (471)
Q Consensus 223 ~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~ 302 (471)
++..+ ++++|||++...... .+..+.+|.+||+.++++++|||||||+.....+++.+++++|+..+++|+|+
T Consensus 234 ~~~~~--~~~~vGpl~~~~~~~-----~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~ 306 (456)
T 2c1x_A 234 KSKLK--TYLNIGPFNLITPPP-----VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWS 306 (456)
T ss_dssp HHHSS--CEEECCCHHHHC--------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HhcCC--CEEEecCcccCcccc-----cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEE
Confidence 76543 899999997643211 01224578999998878899999999998878888999999999999999999
Q ss_pred EecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcchhhhhcCCcccccccccCchhHHHHHhhCCceee
Q 012063 303 VKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIA 382 (471)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~ 382 (471)
++.... ..+|+++.++.+ .|+.+++|+||.++|+|+++++|||||||||++||+++|||||+
T Consensus 307 ~~~~~~-----------------~~l~~~~~~~~~-~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~ 368 (456)
T 2c1x_A 307 LRDKAR-----------------VHLPEGFLEKTR-GYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLIC 368 (456)
T ss_dssp CCGGGG-----------------GGSCTTHHHHHT-TTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEE
T ss_pred ECCcch-----------------hhCCHHHHhhcC-CceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEe
Confidence 986432 247788876654 57788899999999999999999999999999999999999999
Q ss_pred ccccccchhhHHHHHhhh-cceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHH
Q 012063 383 WPLYAEQRLNAVILSEDL-NVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLS 461 (471)
Q Consensus 383 ~P~~~DQ~~na~~~~~~~-G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~ 461 (471)
+|++.||+.||+++++ . |+|+.+...+ +++++|.++|+++|+++++++||+||+++++.+++++.+||||+++++
T Consensus 369 ~P~~~dQ~~Na~~l~~-~~g~g~~l~~~~---~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~ 444 (456)
T 2c1x_A 369 RPFFGDQRLNGRMVED-VLEIGVRIEGGV---FTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFI 444 (456)
T ss_dssp CCCSTTHHHHHHHHHH-TSCCEEECGGGS---CCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHH
T ss_pred cCChhhHHHHHHHHHH-HhCeEEEecCCC---cCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHH
Confidence 9999999999999999 6 9999998665 999999999999998855669999999999999999999999999999
Q ss_pred HHHHHHHh
Q 012063 462 QLVHKWKN 469 (471)
Q Consensus 462 ~~~~~~~~ 469 (471)
+|++++++
T Consensus 445 ~~v~~~~~ 452 (456)
T 2c1x_A 445 TLVDLVSK 452 (456)
T ss_dssp HHHHHHTS
T ss_pred HHHHHHHh
Confidence 99999865
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.7e-44 Score=359.42 Aligned_cols=391 Identities=17% Similarity=0.215 Sum_probs=258.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCC--c-----ch
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFE--E-----DV 76 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~-----~~ 76 (471)
+++||+++++|++||++|+++||++|+++ ||+|++++++... ..... .+++|++++..... . ..
T Consensus 11 ~~~~Il~~~~~~~GHv~p~l~la~~L~~~-Gh~V~~~~~~~~~------~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~ 81 (424)
T 2iya_A 11 TPRHISFFNIPGHGHVNPSLGIVQELVAR-GHRVSYAITDEFA------AQVKA--AGATPVVYDSILPKESNPEESWPE 81 (424)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGH------HHHHH--HTCEEEECCCCSCCTTCTTCCCCS
T ss_pred ccceEEEEeCCCCcccchHHHHHHHHHHC-CCeEEEEeCHHHH------HHHHh--CCCEEEecCccccccccchhhcch
Confidence 46799999999999999999999999876 9999999987332 22221 25788887653111 0 11
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHhhcCCCccEEEeCCCCccHHHHHHHhCCceEEEecchHHHHHHHhhccccchhcccc
Q 012063 77 KAEIQIVLAIKRSLSSVRDVFKSLVASTHLMALVVDPFGTDVFDVAREFYVPSYLYFLTNALSLSLLHYMPKLDEVISCE 156 (471)
Q Consensus 77 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 156 (471)
+....+ ..+........+.+.+++++.+|||||+|.++.|+..+|+++|||++.+++.+.........++.......
T Consensus 82 ~~~~~~-~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~-- 158 (424)
T 2iya_A 82 DQESAM-GLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTA-- 158 (424)
T ss_dssp SHHHHH-HHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC--
T ss_pred hHHHHH-HHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccccccccc--
Confidence 111111 22222223333445555667799999999988889999999999999998765421111000000000000
Q ss_pred ccCCCCcccCCCCCcCccCCCCCCCccCc---Cc---hHHHHHHHHH-------hhcccCcEEEEccccccChHHHHHhh
Q 012063 157 VRDMEQPLKLPGFTIPIHGRDFPDPLQDR---KN---DAYRFMIQIR-------KRYSLADGILINTFMELEPGVIKALQ 223 (471)
Q Consensus 157 ~~~~~~~~~~p~~~~p~~~~~l~~~~~~~---~~---~~~~~~~~~~-------~~~~~~~~~l~~s~~~le~~~~~~~~ 223 (471)
+... +.. .+..... ...+... .. ..+..+.+.. ......+.+++++.++++.+. .
T Consensus 159 --~~~~----~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~----~ 226 (424)
T 2iya_A 159 --DRGE----EAA-APAGTGD-AEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG----D 226 (424)
T ss_dssp -----------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG----G
T ss_pred --cccc----ccc-ccccccc-chhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc----c
Confidence 0000 000 0000000 0000000 00 0011111110 011145678899999888652 1
Q ss_pred cCCCCCCeEEeccCcCCCCCCCccCCCCccccchhhhhccCCCccEEEEEeCCCcCCCHHhHHHHHHHHHhCCCceEEEE
Q 012063 224 EEPSMRSIYPIGPIIRTVSDGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGGTLSYDQLEELALGLELSEQQFLWVV 303 (471)
Q Consensus 224 ~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~ 303 (471)
.. +.++++|||+..... ...+|++..+++++|||+|||......+.+.+++++++..+.+++|.+
T Consensus 227 ~~--~~~~~~vGp~~~~~~-------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~ 291 (424)
T 2iya_A 227 TV--GDNYTFVGPTYGDRS-------------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSV 291 (424)
T ss_dssp GC--CTTEEECCCCCCCCG-------------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEEC
T ss_pred CC--CCCEEEeCCCCCCcc-------------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEE
Confidence 11 237999999764211 123677655567899999999986667888899999988888998988
Q ss_pred ecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcchhhhhcCCcccccccccCchhHHHHHhhCCceeec
Q 012063 304 KSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIAW 383 (471)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~ 383 (471)
+.... ......+| .|+.+.+|+||.++|++++ +||||||+||++||+++|||+|++
T Consensus 292 g~~~~-------------~~~~~~~~---------~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~ 347 (424)
T 2iya_A 292 GRFVD-------------PADLGEVP---------PNVEVHQWVPQLDILTKAS--AFITHAGMGSTMEALSNAVPMVAV 347 (424)
T ss_dssp CTTSC-------------GGGGCSCC---------TTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEEC
T ss_pred CCcCC-------------hHHhccCC---------CCeEEecCCCHHHHHhhCC--EEEECCchhHHHHHHHcCCCEEEe
Confidence 76422 00111233 3899999999999999999 999999999999999999999999
Q ss_pred cccccchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHH
Q 012063 384 PLYAEQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQL 463 (471)
Q Consensus 384 P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~ 463 (471)
|...||+.||+++++ .|+|+.+...+ ++.++|.++|+++|+| +++|++++++++.+++ .++.++.++.+
T Consensus 348 p~~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~i 416 (424)
T 2iya_A 348 PQIAEQTMNAERIVE-LGLGRHIPRDQ---VTAEKLREAVLAVASD---PGVAERLAAVRQEIRE----AGGARAAADIL 416 (424)
T ss_dssp CCSHHHHHHHHHHHH-TTSEEECCGGG---CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHT----SCHHHHHHHHH
T ss_pred cCccchHHHHHHHHH-CCCEEEcCcCC---CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh----cCcHHHHHHHH
Confidence 999999999999999 99999998766 8999999999999998 8999999999999875 34555555555
Q ss_pred HHHHH
Q 012063 464 VHKWK 468 (471)
Q Consensus 464 ~~~~~ 468 (471)
.+-+.
T Consensus 417 ~~~~~ 421 (424)
T 2iya_A 417 EGILA 421 (424)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 44443
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=4.3e-45 Score=361.05 Aligned_cols=344 Identities=19% Similarity=0.184 Sum_probs=218.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCC----------
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFE---------- 73 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~---------- 73 (471)
++|||+|+++|++||++|+++||++|++| ||+|||++++... ... ..++.+..+......
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~r-Gh~Vt~~t~~~~~------~~~---~~g~~~~~~~~~~~~~~~~~~~~~~ 90 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRAL-GHEVRYATGGDIR------AVA---EAGLCAVDVSPGVNYAKLFVPDDTD 90 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECSSTH------HHH---TTTCEEEESSTTCCSHHHHSCCC--
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHC-CCEEEEEeCcchh------hHH---hcCCeeEecCCchhHhhhccccccc
Confidence 47999999999999999999999999876 9999999987332 221 125666665332211
Q ss_pred ------cchhHHHHHHHHHHHhHHHHHHHHHHhhcCCCccEEEeCCCCccHHHHHHHhCCceEEEecchHHHHHHHhhcc
Q 012063 74 ------EDVKAEIQIVLAIKRSLSSVRDVFKSLVASTHLMALVVDPFGTDVFDVAREFYVPSYLYFLTNALSLSLLHYMP 147 (471)
Q Consensus 74 ------~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p 147 (471)
........+...+........+.+.+++++.+||+||+|.+.+++..+|+.+|||++.+...+....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~------- 163 (400)
T 4amg_A 91 VTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSE------- 163 (400)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCC-------
T ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHcCCCceeecccccccc-------
Confidence 0000011111122111122222222333445999999999999999999999999887654322110
Q ss_pred ccchhccccccCCCCcccCCCCCcCccCCCCCCCccCcCchHHHHHHHHHh-hcccCcEEEEccccccChHHHHHhhc-C
Q 012063 148 KLDEVISCEVRDMEQPLKLPGFTIPIHGRDFPDPLQDRKNDAYRFMIQIRK-RYSLADGILINTFMELEPGVIKALQE-E 225 (471)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~s~~~le~~~~~~~~~-~ 225 (471)
+.+ . ...........+... ............. ........+ .
T Consensus 164 -------------------~~~-~------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 207 (400)
T 4amg_A 164 -------------------PGL-G------------ALIRRAMSKDYERHGVTGEPTGSVRLTTT----PPSVEALLPED 207 (400)
T ss_dssp -------------------HHH-H------------HHHHHHTHHHHHHTTCCCCCSCEEEEECC----CHHHHHTSCGG
T ss_pred -------------------cch-h------------hHHHHHHHHHHHHhCCCcccccchhhccc----CchhhccCccc
Confidence 000 0 000000000000000 0000111111111 011111000 0
Q ss_pred CCCCCeEEeccCcCCCCCCCccCCCCccccchhhhhccCCCccEEEEEeCCCcCCC--HHhHHHHHHHHHhCCCceEEEE
Q 012063 226 PSMRSIYPIGPIIRTVSDGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGGTLS--YDQLEELALGLELSEQQFLWVV 303 (471)
Q Consensus 226 ~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~~~~--~~~~~~~~~al~~~~~~~~~~~ 303 (471)
......+...+... .....+.+|++..+++++|||||||+.... .+.+.+++++++..+.+++|..
T Consensus 208 ~~~~~~~~~~~~~~------------~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~ 275 (400)
T 4amg_A 208 RRSPGAWPMRYVPY------------NGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTL 275 (400)
T ss_dssp GCCTTCEECCCCCC------------CCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEEC
T ss_pred ccCCcccCcccccc------------cccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEe
Confidence 00012222222211 122344578888888999999999985433 3568889999999999999988
Q ss_pred ecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcchhhhhcCCcccccccccCchhHHHHHhhCCceeec
Q 012063 304 KSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIAW 383 (471)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~ 383 (471)
+.... .....+|+ |+.+.+|+||.++|+|++ +||||||+||++||+++|||||++
T Consensus 276 ~~~~~--------------~~~~~~~~---------~v~~~~~~p~~~lL~~~~--~~v~h~G~~s~~Eal~~GvP~v~~ 330 (400)
T 4amg_A 276 GGGDL--------------ALLGELPA---------NVRVVEWIPLGALLETCD--AIIHHGGSGTLLTALAAGVPQCVI 330 (400)
T ss_dssp CTTCC--------------CCCCCCCT---------TEEEECCCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCEEEC
T ss_pred cCccc--------------cccccCCC---------CEEEEeecCHHHHhhhhh--heeccCCccHHHHHHHhCCCEEEe
Confidence 76543 22344565 899999999999999999 999999999999999999999999
Q ss_pred cccccchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Q 012063 384 PLYAEQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAA 448 (471)
Q Consensus 384 P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~ 448 (471)
|+++||+.||+++++ +|+|+.++..+ ++++ +|+++|+| ++||++|+++++++++
T Consensus 331 P~~~dQ~~na~~v~~-~G~g~~l~~~~---~~~~----al~~lL~d---~~~r~~a~~l~~~~~~ 384 (400)
T 4amg_A 331 PHGSYQDTNRDVLTG-LGIGFDAEAGS---LGAE----QCRRLLDD---AGLREAALRVRQEMSE 384 (400)
T ss_dssp CC---CHHHHHHHHH-HTSEEECCTTT---CSHH----HHHHHHHC---HHHHHHHHHHHHHHHT
T ss_pred cCcccHHHHHHHHHH-CCCEEEcCCCC---chHH----HHHHHHcC---HHHHHHHHHHHHHHHc
Confidence 999999999999999 99999998776 7765 56678888 8999999999999986
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=7.8e-42 Score=339.09 Aligned_cols=351 Identities=15% Similarity=0.095 Sum_probs=237.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCC---c-chhHHHH
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFE---E-DVKAEIQ 81 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~---~-~~~~~~~ 81 (471)
|||++++.|+.||++|+++||++|+++ ||+|||++++.. ...... .+++|+.++..... . .......
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~-Gh~V~~~~~~~~------~~~v~~--~g~~~~~i~~~~~~~~~~~~~~~~~~ 71 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDL-GADVRMCAPPDC------AERLAE--VGVPHVPVGPSARAPIQRAKPLTAED 71 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGGG------HHHHHH--TTCCEEECCC-------CCSCCCHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHC-CCeEEEEcCHHH------HHHHHH--cCCeeeeCCCCHHHHhhcccccchHH
Confidence 699999999999999999999999876 999999998732 222221 26888887653211 0 0001111
Q ss_pred HHHHHHHhHHHHHHHHHHhhc-CCCccEEEeCC-CCcc--HHHHHHHhCCceEEEecchHHHHHHHhhccccchhccccc
Q 012063 82 IVLAIKRSLSSVRDVFKSLVA-STHLMALVVDP-FGTD--VFDVAREFYVPSYLYFLTNALSLSLLHYMPKLDEVISCEV 157 (471)
Q Consensus 82 ~~~~~~~~~~~l~~~l~~~~~-~~~~D~VI~D~-~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 157 (471)
+..++. ....+.++++.+ ..+||+||+|. +..| +..+|+.+|||++.+++.+......
T Consensus 72 ~~~~~~---~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~--------------- 133 (415)
T 1iir_A 72 VRRFTT---EAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSP--------------- 133 (415)
T ss_dssp HHHHHH---HHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCS---------------
T ss_pred HHHHHH---HHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCc---------------
Confidence 111111 122333444432 46899999997 6677 7789999999999998765432000
Q ss_pred cCCCCcccCCCCCcCccCCCCCCC-ccCcC-----chH-HHHHHHHHhhc----------------ccCcEEEEcccccc
Q 012063 158 RDMEQPLKLPGFTIPIHGRDFPDP-LQDRK-----NDA-YRFMIQIRKRY----------------SLADGILINTFMEL 214 (471)
Q Consensus 158 ~~~~~~~~~p~~~~p~~~~~l~~~-~~~~~-----~~~-~~~~~~~~~~~----------------~~~~~~l~~s~~~l 214 (471)
.+|....+ ..++.. ...+. ... +..+....... ... .+++++.+++
T Consensus 134 -------~~p~~~~~---~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l 202 (415)
T 1iir_A 134 -------YYPPPPLG---EPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVL 202 (415)
T ss_dssp -------SSCCCC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTT
T ss_pred -------ccCCccCC---ccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhh
Confidence 00110000 001000 00000 000 00010000000 111 4677888877
Q ss_pred Ch-HHHHHhhcCCCCCCeEEeccCcCCCCCCCccCCCCccccchhhhhccCCCccEEEEEeCCCcCCCHHhHHHHHHHHH
Q 012063 215 EP-GVIKALQEEPSMRSIYPIGPIIRTVSDGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGGTLSYDQLEELALGLE 293 (471)
Q Consensus 215 e~-~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~~~~~~~~~~~~~al~ 293 (471)
++ + .. ..++++|||+..... +..+.++.+||+.+ +++|||+|||+. ...+.+..++++++
T Consensus 203 ~~~~-----~~---~~~~~~vG~~~~~~~--------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~ 263 (415)
T 1iir_A 203 APLQ-----PT---DLDAVQTGAWILPDE--------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIR 263 (415)
T ss_dssp SCCC-----CC---SSCCEECCCCCCCCC--------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHH
T ss_pred cCCC-----cc---cCCeEeeCCCccCcc--------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHH
Confidence 75 2 11 117899999876432 24466788999864 469999999987 56777888999999
Q ss_pred hCCCceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcchhhhhcCCcccccccccCchhHHHH
Q 012063 294 LSEQQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLES 373 (471)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~ea 373 (471)
..+.+++|+++.... . ...+|+ |+.+.+|+||.++|+.++ +||||||+||++||
T Consensus 264 ~~~~~~v~~~g~~~~--------------~-~~~~~~---------~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea 317 (415)
T 1iir_A 264 AHGRRVILSRGWADL--------------V-LPDDGA---------DCFAIGEVNHQVLFGRVA--AVIHHGGAGTTHVA 317 (415)
T ss_dssp HTTCCEEECTTCTTC--------------C-CSSCGG---------GEEECSSCCHHHHGGGSS--EEEECCCHHHHHHH
T ss_pred HCCCeEEEEeCCCcc--------------c-ccCCCC---------CEEEeCcCChHHHHhhCC--EEEeCCChhHHHHH
Confidence 999999998876432 1 112333 899999999999998777 99999999999999
Q ss_pred HhhCCceeeccccccchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 012063 374 IVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAA 447 (471)
Q Consensus 374 l~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~ 447 (471)
+++|||+|++|+..||+.||+++++ .|+|+.+...+ ++.++|.++|+++ +| +++|++++++++.++
T Consensus 318 ~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~ 383 (415)
T 1iir_A 318 ARAGAPQILLPQMADQPYYAGRVAE-LGVGVAHDGPI---PTFDSLSAALATA-LT---PETHARATAVAGTIR 383 (415)
T ss_dssp HHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECSSSS---CCHHHHHHHHHHH-TS---HHHHHHHHHHHHHSC
T ss_pred HHcCCCEEECCCCCccHHHHHHHHH-CCCcccCCcCC---CCHHHHHHHHHHH-cC---HHHHHHHHHHHHHHh
Confidence 9999999999999999999999999 99999998766 8999999999999 88 899999999988875
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.2e-40 Score=330.66 Aligned_cols=352 Identities=12% Similarity=0.034 Sum_probs=239.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCC--c---chhHHH
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFE--E---DVKAEI 80 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~---~~~~~~ 80 (471)
|||++++.++.||++|+++||++|+++ ||+|++++++.. ...... .+++|+.++..... . ......
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~-Gh~V~~~~~~~~------~~~v~~--~g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKAL-GVQTRMCAPPAA------EERLAE--VGVPHVPVGLPQHMMLQEGMPPPPPE 71 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHT-TCEEEEEECGGG------HHHHHH--HTCCEEECSCCGGGCCCTTSCCCCHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHC-CCeEEEEeCHHH------HHHHHH--cCCeeeecCCCHHHHHhhccccchhH
Confidence 699999999999999999999999876 999999998632 222221 26788887653111 0 000011
Q ss_pred HHHHHHHHhHHHHHHHHHHhhc-CCCccEEEeCC-CCcc--HHHHHHHhCCceEEEecchHHHHHHHhhccccchhcccc
Q 012063 81 QIVLAIKRSLSSVRDVFKSLVA-STHLMALVVDP-FGTD--VFDVAREFYVPSYLYFLTNALSLSLLHYMPKLDEVISCE 156 (471)
Q Consensus 81 ~~~~~~~~~~~~l~~~l~~~~~-~~~~D~VI~D~-~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 156 (471)
.+..++... ..+.++.+.+ ..+||+||+|. +.++ +..+|+.+|||++.+.+++.... ..
T Consensus 72 ~~~~~~~~~---~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~------~~-------- 134 (416)
T 1rrv_A 72 EEQRLAAMT---VEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA------SP-------- 134 (416)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC------CS--------
T ss_pred HHHHHHHHH---HHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC------Cc--------
Confidence 122222211 1223333221 45899999996 4455 67899999999998887653210 00
Q ss_pred ccCCCCcccCCCCCcCccCCCC-CCCccCcCc-h----H--------HHHHHHHH---------hhcccCcEEEEccccc
Q 012063 157 VRDMEQPLKLPGFTIPIHGRDF-PDPLQDRKN-D----A--------YRFMIQIR---------KRYSLADGILINTFME 213 (471)
Q Consensus 157 ~~~~~~~~~~p~~~~p~~~~~l-~~~~~~~~~-~----~--------~~~~~~~~---------~~~~~~~~~l~~s~~~ 213 (471)
..+ |.+ + ..+ +....++.. . . .+.+.+.. ...... .+++++.++
T Consensus 135 ------~~p-~~~--~---~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~ 201 (416)
T 1rrv_A 135 ------HLP-PAY--D---EPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPV 201 (416)
T ss_dssp ------SSC-CCB--C---SCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTT
T ss_pred ------ccC-CCC--C---CCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCcc
Confidence 000 111 0 000 000101000 0 0 00010000 001112 567788888
Q ss_pred cChHHHHHhhcCCCCCCeEEeccCcCCCCCCCccCCCCccccchhhhhccCCCccEEEEEeCCCcC-CCHHhHHHHHHHH
Q 012063 214 LEPGVIKALQEEPSMRSIYPIGPIIRTVSDGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGGT-LSYDQLEELALGL 292 (471)
Q Consensus 214 le~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~~-~~~~~~~~~~~al 292 (471)
++++. . ..++++|||+..... +..+.++.+||+.+ +++|||+|||... ...+.+.++++++
T Consensus 202 l~~~~-----~---~~~~~~vG~~~~~~~--------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al 263 (416)
T 1rrv_A 202 LAPLQ-----P---DVDAVQTGAWLLSDE--------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAI 263 (416)
T ss_dssp TSCCC-----S---SCCCEECCCCCCCCC--------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHH
T ss_pred ccCCC-----C---CCCeeeECCCccCcc--------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHH
Confidence 87531 1 117899999876532 23466788999864 4699999999854 3456678899999
Q ss_pred HhCCCceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcchhhhhcCCcccccccccCchhHHH
Q 012063 293 ELSEQQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLE 372 (471)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~e 372 (471)
+..+.+++|+++.... . ...+|+ |+.+.+|+||.++|++++ +||||||+||++|
T Consensus 264 ~~~~~~~v~~~g~~~~--------------~-~~~~~~---------~v~~~~~~~~~~ll~~~d--~~v~~~G~~t~~E 317 (416)
T 1rrv_A 264 RAQGRRVILSRGWTEL--------------V-LPDDRD---------DCFAIDEVNFQALFRRVA--AVIHHGSAGTEHV 317 (416)
T ss_dssp HHTTCCEEEECTTTTC--------------C-CSCCCT---------TEEEESSCCHHHHGGGSS--EEEECCCHHHHHH
T ss_pred HHCCCeEEEEeCCccc--------------c-ccCCCC---------CEEEeccCChHHHhccCC--EEEecCChhHHHH
Confidence 9999999998876432 1 112333 889999999999998888 9999999999999
Q ss_pred HHhhCCceeeccccccchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Q 012063 373 SIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAA 448 (471)
Q Consensus 373 al~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~ 448 (471)
|+++|||+|++|+..||+.||+++++ .|+|+.+...+ ++.++|.++|+++ +| +++|++++++++.+++
T Consensus 318 a~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 318 ATRAGVPQLVIPRNTDQPYFAGRVAA-LGIGVAHDGPT---PTFESLSAALTTV-LA---PETRARAEAVAGMVLT 385 (416)
T ss_dssp HHHHTCCEEECCCSBTHHHHHHHHHH-HTSEEECSSSC---CCHHHHHHHHHHH-TS---HHHHHHHHHHTTTCCC
T ss_pred HHHcCCCEEEccCCCCcHHHHHHHHH-CCCccCCCCCC---CCHHHHHHHHHHh-hC---HHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999 99999998766 8999999999999 88 8999999999887763
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=8.6e-40 Score=324.65 Aligned_cols=377 Identities=14% Similarity=0.145 Sum_probs=250.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCCcch-------
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFEEDV------- 76 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~------- 76 (471)
.+|||+++++++.||++|+++||++|.++ ||+|++++++. ...... ..++.+..++........
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~-Gh~V~v~~~~~------~~~~~~--~~G~~~~~~~~~~~~~~~~~~~~~~ 89 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRR-GHRVSYVTAGG------FAEPVR--AAGATVVPYQSEIIDADAAEVFGSD 89 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGG------GHHHHH--HTTCEEEECCCSTTTCCHHHHHHSS
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHC-CCEEEEEeCHH------HHHHHH--hcCCEEEeccccccccccchhhccc
Confidence 47899999999999999999999999876 99999999752 222222 236888888643222110
Q ss_pred hHHHHHHH-HHHHhHHHHHHHHHHhhcCCCccEEEeC-CCCccHHHHHHHhCCceEEEecchHHHHHHHhhccccchhcc
Q 012063 77 KAEIQIVL-AIKRSLSSVRDVFKSLVASTHLMALVVD-PFGTDVFDVAREFYVPSYLYFLTNALSLSLLHYMPKLDEVIS 154 (471)
Q Consensus 77 ~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~D~VI~D-~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~ 154 (471)
.....+.. +.... ....+.+.+++++.+||+||+| +..+++..+|+.+|||++.+.+...... .+...
T Consensus 90 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~----~~~~~----- 159 (415)
T 3rsc_A 90 DLGVRPHLMYLREN-VSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE----HYSFS----- 159 (415)
T ss_dssp SSCHHHHHHHHHHH-HHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS----SCCHH-----
T ss_pred cHHHHHHHHHHHHH-HHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccC----ccccc-----
Confidence 01111111 11111 2222334445567799999999 7778888899999999998774422100 00000
Q ss_pred ccccCCCCcccCCCCCcCccCCCCCCCccCcCchHHHHHHHHH-------hhccc-CcEEEEccccccChHHHHHhhcCC
Q 012063 155 CEVRDMEQPLKLPGFTIPIHGRDFPDPLQDRKNDAYRFMIQIR-------KRYSL-ADGILINTFMELEPGVIKALQEEP 226 (471)
Q Consensus 155 ~~~~~~~~~~~~p~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~l~~s~~~le~~~~~~~~~~~ 226 (471)
+.+ .+......+. .+......+..+.... ..... .+..+....+.++.. ...
T Consensus 160 ------------~~~-~~~~~~~~p~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~- 219 (415)
T 3rsc_A 160 ------------QDM-VTLAGTIDPL-DLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA-----GDT- 219 (415)
T ss_dssp ------------HHH-HHHHTCCCGG-GCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT-----GGG-
T ss_pred ------------ccc-ccccccCChh-hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC-----ccc-
Confidence 000 0000000000 0000000111111110 00111 145566555555533 111
Q ss_pred CCCCeEEeccCcCCCCCCCccCCCCccccchhhhhccCCCccEEEEEeCCCcCCCHHhHHHHHHHHHhCCCceEEEEecC
Q 012063 227 SMRSIYPIGPIIRTVSDGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGGTLSYDQLEELALGLELSEQQFLWVVKSP 306 (471)
Q Consensus 227 ~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~ 306 (471)
.+.++.++||+..... ...+|+...+++++|||++||......+.+..++++++..+.+++|.++.+
T Consensus 220 ~~~~~~~vGp~~~~~~-------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~ 286 (415)
T 3rsc_A 220 FDDRFVFVGPCFDDRR-------------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQ 286 (415)
T ss_dssp CCTTEEECCCCCCCCG-------------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTT
T ss_pred CCCceEEeCCCCCCcc-------------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 1237999999765322 123455444567899999999976677788899999998888888888754
Q ss_pred CCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcchhhhhcCCcccccccccCchhHHHHHhhCCceeecccc
Q 012063 307 DDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIAWPLY 386 (471)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~ 386 (471)
.+ ......++ +|+.+.+|+||.++|++++ +||||||+||++||+++|+|+|++|..
T Consensus 287 ~~-------------~~~l~~~~---------~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~ 342 (415)
T 3rsc_A 287 VD-------------PAALGDLP---------PNVEAHRWVPHVKVLEQAT--VCVTHGGMGTLMEALYWGRPLVVVPQS 342 (415)
T ss_dssp SC-------------GGGGCCCC---------TTEEEESCCCHHHHHHHEE--EEEESCCHHHHHHHHHTTCCEEECCCS
T ss_pred CC-------------hHHhcCCC---------CcEEEEecCCHHHHHhhCC--EEEECCcHHHHHHHHHhCCCEEEeCCc
Confidence 22 01112233 3899999999999999999 999999999999999999999999999
Q ss_pred ccchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Q 012063 387 AEQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVHK 466 (471)
Q Consensus 387 ~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 466 (471)
.||+.||.++++ .|+|+.+...+ ++.++|.++|+++|+| ++++++++++++.+++ .++.++.++.+.+-
T Consensus 343 ~~q~~~a~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~ 411 (415)
T 3rsc_A 343 FDVQPMARRVDQ-LGLGAVLPGEK---ADGDTLLAAVGAVAAD---PALLARVEAMRGHVRR----AGGAARAADAVEAY 411 (415)
T ss_dssp GGGHHHHHHHHH-HTCEEECCGGG---CCHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHH----SCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHH-cCCEEEcccCC---CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh----cCHHHHHHHHHHHH
Confidence 999999999999 99999998776 8999999999999999 8999999999999876 45556666655444
Q ss_pred H
Q 012063 467 W 467 (471)
Q Consensus 467 ~ 467 (471)
+
T Consensus 412 ~ 412 (415)
T 3rsc_A 412 L 412 (415)
T ss_dssp H
T ss_pred h
Confidence 3
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=1.1e-38 Score=315.13 Aligned_cols=373 Identities=17% Similarity=0.200 Sum_probs=247.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCC-------cchh
Q 012063 5 KHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFE-------EDVK 77 (471)
Q Consensus 5 ~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-------~~~~ 77 (471)
++||++++.++.||++|++.||++|+++ ||+|++++++ ....... ..+++|..++..... ....
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~~------~~~~~~~--~~G~~~~~~~~~~~~~~~~~~~~~~~ 74 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARR-GHRITYVTTP------LFADEVK--AAGAEVVLYKSEFDTFHVPEVVKQED 74 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECH------HHHHHHH--HTTCEEEECCCGGGTSSSSSSSCCTT
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhC-CCEEEEEcCH------HHHHHHH--HcCCEEEecccccccccccccccccc
Confidence 3599999999999999999999999876 9999999975 2323322 236888887642111 1112
Q ss_pred HHHHHHH-HHHHhHHHHHHHHHHhhcCCCccEEEeC-CCCccHHHHHHHhCCceEEEecchHHHHHHHhhccccchhccc
Q 012063 78 AEIQIVL-AIKRSLSSVRDVFKSLVASTHLMALVVD-PFGTDVFDVAREFYVPSYLYFLTNALSLSLLHYMPKLDEVISC 155 (471)
Q Consensus 78 ~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~D~VI~D-~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 155 (471)
....+.. +.... ....+.+.+++++.+||+||+| ....++..+|+.+|||++.+.+...... .....
T Consensus 75 ~~~~~~~~~~~~~-~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~----~~~~~------ 143 (402)
T 3ia7_A 75 AETQLHLVYVREN-VAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANE----HYSLF------ 143 (402)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBT----TBCHH------
T ss_pred hHHHHHHHHHHHH-HHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCc----ccccc------
Confidence 2222222 22222 2222334444566799999999 7778888899999999988764322100 00000
Q ss_pred cccCCCCcccCCCCCcCccCCCCCCCccCcCchHHHHHHHHHhh----------cccC-cEEEEccccccChHHHHHhhc
Q 012063 156 EVRDMEQPLKLPGFTIPIHGRDFPDPLQDRKNDAYRFMIQIRKR----------YSLA-DGILINTFMELEPGVIKALQE 224 (471)
Q Consensus 156 ~~~~~~~~~~~p~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~l~~s~~~le~~~~~~~~~ 224 (471)
+.+ .+......+. . .......+.+.... .... +..+....++++.. ..
T Consensus 144 -----------~~~-~~~~~~~~~~-~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~ 202 (402)
T 3ia7_A 144 -----------KEL-WKSNGQRHPA-D---VEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF-----AE 202 (402)
T ss_dssp -----------HHH-HHHHTCCCGG-G---SHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-----GG
T ss_pred -----------ccc-cccccccChh-h---HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-----cc
Confidence 000 0000000000 0 00001111111100 1111 44455555555433 11
Q ss_pred CCCCCCeEEeccCcCCCCCCCccCCCCccccchhhhhccCCCccEEEEEeCCCcCCCHHhHHHHHHHHHhCCCceEEEEe
Q 012063 225 EPSMRSIYPIGPIIRTVSDGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGGTLSYDQLEELALGLELSEQQFLWVVK 304 (471)
Q Consensus 225 ~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~ 304 (471)
. .+.++.++||+...... ..+|+...+++++|||++||......+.+..++++++..+.+++|.++
T Consensus 203 ~-~~~~~~~vGp~~~~~~~-------------~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 268 (402)
T 3ia7_A 203 T-FDERFAFVGPTLTGRDG-------------QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIG 268 (402)
T ss_dssp G-CCTTEEECCCCCCC-----------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECC
T ss_pred c-CCCCeEEeCCCCCCccc-------------CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeC
Confidence 1 12379999997653321 134554445678999999999776777889999999988888888887
Q ss_pred cCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcchhhhhcCCcccccccccCchhHHHHHhhCCceeecc
Q 012063 305 SPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIAWP 384 (471)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P 384 (471)
.+.. ......++ +|+.+.+|+||.++|++++ +||||||+||++||+++|+|+|++|
T Consensus 269 ~~~~-------------~~~~~~~~---------~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p 324 (402)
T 3ia7_A 269 GFLD-------------PAVLGPLP---------PNVEAHQWIPFHSVLAHAR--ACLTHGTTGAVLEAFAAGVPLVLVP 324 (402)
T ss_dssp TTSC-------------GGGGCSCC---------TTEEEESCCCHHHHHTTEE--EEEECCCHHHHHHHHHTTCCEEECG
T ss_pred CcCC-------------hhhhCCCC---------CcEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEeC
Confidence 5422 01112233 3899999999999999999 9999999999999999999999999
Q ss_pred c-cccchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHH
Q 012063 385 L-YAEQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQL 463 (471)
Q Consensus 385 ~-~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~ 463 (471)
. ..||+.||.++++ .|+|+.+...+ +++++|.++|+++|+| ++++++++++++.+++ .++.++.++.+
T Consensus 325 ~~~~~q~~~a~~~~~-~g~g~~~~~~~---~~~~~l~~~~~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~i 393 (402)
T 3ia7_A 325 HFATEAAPSAERVIE-LGLGSVLRPDQ---LEPASIREAVERLAAD---SAVRERVRRMQRDILS----SGGPARAADEV 393 (402)
T ss_dssp GGCGGGHHHHHHHHH-TTSEEECCGGG---CSHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHT----SCHHHHHHHHH
T ss_pred CCcccHHHHHHHHHH-cCCEEEccCCC---CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHhh----CChHHHHHHHH
Confidence 9 9999999999999 99999998776 8999999999999999 8999999999998875 45656666655
Q ss_pred HHHH
Q 012063 464 VHKW 467 (471)
Q Consensus 464 ~~~~ 467 (471)
.+-+
T Consensus 394 ~~~~ 397 (402)
T 3ia7_A 394 EAYL 397 (402)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5444
No 12
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=8.7e-38 Score=312.47 Aligned_cols=371 Identities=12% Similarity=0.089 Sum_probs=231.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCC---c-c----
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFE---E-D---- 75 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~---~-~---- 75 (471)
.+|||++++.++.||++|+++||++|.++ ||+|+|++++. ...... ..+++|+.++..... . .
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~-GheV~~~~~~~------~~~~v~--~~G~~~~~i~~~~~~~~~~~~~~~~ 89 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAA-GHEVRVVASPA------LTEDIT--AAGLTAVPVGTDVDLVDFMTHAGHD 89 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHT-TCEEEEEECGG------GHHHHH--TTTCCEEECSCCCCHHHHHHHTTHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHC-CCeEEEEeCch------hHHHHH--hCCCceeecCCccchHHHhhhhhcc
Confidence 35899999999999999999999999876 99999999762 222222 236888888754210 0 0
Q ss_pred --------------hh--HHHHH---HHHHHHh-H-----H-HHHHHHHHhhcCCCccEEEeCCCCccHHHHHHHhCCce
Q 012063 76 --------------VK--AEIQI---VLAIKRS-L-----S-SVRDVFKSLVASTHLMALVVDPFGTDVFDVAREFYVPS 129 (471)
Q Consensus 76 --------------~~--~~~~~---~~~~~~~-~-----~-~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~ 129 (471)
.. ....+ ...+... . . .+.+++ +++++.+||+||+|....++..+|+.+|||+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~pDlVv~d~~~~~~~~aA~~lgiP~ 168 (441)
T 2yjn_A 90 IIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMV-SFCRKWRPDLVIWEPLTFAAPIAAAVTGTPH 168 (441)
T ss_dssp HHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHH-HHHHHHCCSEEEECTTCTHHHHHHHHHTCCE
T ss_pred cccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHH-HHHHhcCCCEEEecCcchhHHHHHHHcCCCE
Confidence 00 00001 1111100 0 1 222222 2233459999999998778888999999999
Q ss_pred EEEecchHHHHHHHhhccccchhccccccCCCCcccCCCCCcCccCCCCCCCccCcCchHHHHHHHHHhh-c-----ccC
Q 012063 130 YLYFLTNALSLSLLHYMPKLDEVISCEVRDMEQPLKLPGFTIPIHGRDFPDPLQDRKNDAYRFMIQIRKR-Y-----SLA 203 (471)
Q Consensus 130 v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~-~-----~~~ 203 (471)
+.+...+............. ++. .+.. ...++....+..+...... . ...
T Consensus 169 v~~~~~~~~~~~~~~~~~~~-----------------~~~-~~~~------~~~~~~~~~l~~~~~~~g~~~~~~~~~~~ 224 (441)
T 2yjn_A 169 ARLLWGPDITTRARQNFLGL-----------------LPD-QPEE------HREDPLAEWLTWTLEKYGGPAFDEEVVVG 224 (441)
T ss_dssp EEECSSCCHHHHHHHHHHHH-----------------GGG-SCTT------TCCCHHHHHHHHHHHHTTCCCCCGGGTSC
T ss_pred EEEecCCCcchhhhhhhhhh-----------------ccc-cccc------cccchHHHHHHHHHHHcCCCCCCccccCC
Confidence 98865432211100000000 011 1100 0111111122222211111 0 012
Q ss_pred cEEEEccccccChHHHHHhhcCCCCCCeEEeccCcCCCCCCCccCCCCccccchhhhhccCCCccEEEEEeCCCcCC---
Q 012063 204 DGILINTFMELEPGVIKALQEEPSMRSIYPIGPIIRTVSDGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGGTL--- 280 (471)
Q Consensus 204 ~~~l~~s~~~le~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~~~--- 280 (471)
+..+.++.+.++.+ ... + -..+++... ..+.++.+|++..+++++|||++||+...
T Consensus 225 ~~~l~~~~~~~~~~-----~~~-~---~~~~~~~~~------------~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~ 283 (441)
T 2yjn_A 225 QWTIDPAPAAIRLD-----TGL-K---TVGMRYVDY------------NGPSVVPEWLHDEPERRRVCLTLGISSRENSI 283 (441)
T ss_dssp SSEEECSCGGGSCC-----CCC-C---EEECCCCCC------------CSSCCCCGGGSSCCSSCEEEEEC---------
T ss_pred CeEEEecCccccCC-----CCC-C---CCceeeeCC------------CCCcccchHhhcCCCCCEEEEECCCCcccccC
Confidence 22333333333321 000 0 011222110 11234568998656678999999998653
Q ss_pred CHHhHHHHHHHHHhCCCceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcchhhhhcCCcccc
Q 012063 281 SYDQLEELALGLELSEQQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAPQVEVLGHPSTGG 360 (471)
Q Consensus 281 ~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~pq~~~L~~~~~~~ 360 (471)
..+.+..++++++..+.+++|+.+.... .....+|+ |+.+.+|+||.++|+.++ +
T Consensus 284 ~~~~~~~~~~al~~~~~~~v~~~g~~~~--------------~~l~~~~~---------~v~~~~~~~~~~ll~~ad--~ 338 (441)
T 2yjn_A 284 GQVSIEELLGAVGDVDAEIIATFDAQQL--------------EGVANIPD---------NVRTVGFVPMHALLPTCA--A 338 (441)
T ss_dssp -CCSTTTTHHHHHTSSSEEEECCCTTTT--------------SSCSSCCS---------SEEECCSCCHHHHGGGCS--E
T ss_pred hHHHHHHHHHHHHcCCCEEEEEECCcch--------------hhhccCCC---------CEEEecCCCHHHHHhhCC--E
Confidence 3456778899998888999998875322 11112333 899999999999998888 9
Q ss_pred cccccCchhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHH
Q 012063 361 FLTHCGWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMN 440 (471)
Q Consensus 361 ~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~ 440 (471)
||||||+||++||+++|||+|++|+..||+.||.++++ .|+|+.+...+ ++.++|.++|+++|+| ++++++++
T Consensus 339 ~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~---~~~~~~~~ 411 (441)
T 2yjn_A 339 TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPVPE---LTPDQLRESVKRVLDD---PAHRAGAA 411 (441)
T ss_dssp EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCTTT---CCHHHHHHHHHHHHHC---HHHHHHHH
T ss_pred EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEccccc---CCHHHHHHHHHHHhcC---HHHHHHHH
Confidence 99999999999999999999999999999999999999 99999998776 8999999999999998 89999999
Q ss_pred HHHHHHHHHhhcCCCHHHHHHHHHH
Q 012063 441 RLKDAAAAAVSDGGSSTKTLSQLVH 465 (471)
Q Consensus 441 ~l~~~~~~~~~~~g~~~~~~~~~~~ 465 (471)
++++.+++ .++.++.++.+.+
T Consensus 412 ~~~~~~~~----~~~~~~~~~~i~~ 432 (441)
T 2yjn_A 412 RMRDDMLA----EPSPAEVVGICEE 432 (441)
T ss_dssp HHHHHHHT----SCCHHHHHHHHHH
T ss_pred HHHHHHHc----CCCHHHHHHHHHH
Confidence 99998875 3444555544433
No 13
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=6.6e-39 Score=316.60 Aligned_cols=354 Identities=14% Similarity=0.070 Sum_probs=236.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCC-------cchhH
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFE-------EDVKA 78 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-------~~~~~ 78 (471)
|||+|++.++.||++|+++||++|.+| ||+|++++++ ..+..... .++.|..++..... .....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~-Gh~V~v~~~~------~~~~~v~~--~g~~~~~l~~~~~~~~~~~~~~~~~~ 71 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLREL-GADARMCLPP------DYVERCAE--VGVPMVPVGRAVRAGAREPGELPPGA 71 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHT-TCCEEEEECG------GGHHHHHH--TTCCEEECSSCSSGGGSCTTCCCTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHC-CCeEEEEeCH------HHHHHHHH--cCCceeecCCCHHHHhccccCCHHHH
Confidence 689999999999999999999999775 9999999976 33333332 36888888654321 00000
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhhcCCCccEEEeCCCCccH---HHHHHHhCCceEEEecchHHHHHHHhhccccchhccc
Q 012063 79 EIQIVLAIKRSLSSVRDVFKSLVASTHLMALVVDPFGTDV---FDVAREFYVPSYLYFLTNALSLSLLHYMPKLDEVISC 155 (471)
Q Consensus 79 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~---~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 155 (471)
...+.... ....+.+.++. .+||+||+|..+..+ ..+|+++|||++.....+....+.
T Consensus 72 ~~~~~~~~----~~~~~~l~~~~--~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~------------- 132 (404)
T 3h4t_A 72 AEVVTEVV----AEWFDKVPAAI--EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE------------- 132 (404)
T ss_dssp GGGHHHHH----HHHHHHHHHHH--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG-------------
T ss_pred HHHHHHHH----HHHHHHHHHHh--cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCCh-------------
Confidence 11111111 11112222222 279999998665555 578999999999887665421000
Q ss_pred cccCCCCcccCCCCCcCccCCCCCCCccC-cCchHHHHHHHHHhhcc---------------cCcEEEEccccccChHHH
Q 012063 156 EVRDMEQPLKLPGFTIPIHGRDFPDPLQD-RKNDAYRFMIQIRKRYS---------------LADGILINTFMELEPGVI 219 (471)
Q Consensus 156 ~~~~~~~~~~~p~~~~p~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~---------------~~~~~l~~s~~~le~~~~ 219 (471)
.+ ...+. +....+..+....+..+ ..+..+.+..+.+.+.
T Consensus 133 ------------~~----------~~~~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~-- 188 (404)
T 3h4t_A 133 ------------QS----------QAERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL-- 188 (404)
T ss_dssp ------------SC----------HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC--
T ss_pred ------------hH----------HHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC--
Confidence 00 00000 00000000000000000 0111233444444322
Q ss_pred HHhhcCCCCCCeEEeccCcCCCCCCCccCCCCccccchhhhhccCCCccEEEEEeCCCcCCCHHhHHHHHHHHHhCCCce
Q 012063 220 KALQEEPSMRSIYPIGPIIRTVSDGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGGTLSYDQLEELALGLELSEQQF 299 (471)
Q Consensus 220 ~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~~~~~~~~~~~~~al~~~~~~~ 299 (471)
.. .+.+++++|++..... ..+++++.+|++.. +++|||+|||+.. ..+.+..++++++..+.++
T Consensus 189 ---~~--~~~~~~~~G~~~~~~~--------~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~v 252 (404)
T 3h4t_A 189 ---RP--TDLGTVQTGAWILPDQ--------RPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRV 252 (404)
T ss_dssp ---CT--TCCSCCBCCCCCCCCC--------CCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCE
T ss_pred ---CC--CCCCeEEeCccccCCC--------CCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEE
Confidence 01 1227888998765432 34567788898753 5699999999976 6777889999999999999
Q ss_pred EEEEecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcchhhhhcCCcccccccccCchhHHHHHhhCCc
Q 012063 300 LWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLESIVHGVP 379 (471)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~eal~~GvP 379 (471)
+|+.+.... .. ..++ +|+.+.+|+||.++|++++ +||||||+||++||+++|||
T Consensus 253 v~~~g~~~~--------------~~-~~~~---------~~v~~~~~~~~~~ll~~~d--~~v~~gG~~t~~Eal~~GvP 306 (404)
T 3h4t_A 253 VLSSGWAGL--------------GR-IDEG---------DDCLVVGEVNHQVLFGRVA--AVVHHGGAGTTTAVTRAGAP 306 (404)
T ss_dssp EEECTTTTC--------------CC-SSCC---------TTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCC
T ss_pred EEEeCCccc--------------cc-ccCC---------CCEEEecCCCHHHHHhhCc--EEEECCcHHHHHHHHHcCCC
Confidence 998876432 01 1123 3899999999999999988 99999999999999999999
Q ss_pred eeeccccccchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHH
Q 012063 380 LIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKT 459 (471)
Q Consensus 380 ~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~ 459 (471)
+|++|+.+||+.||.++++ .|+|+.+...+ ++.++|.++|+++++ ++|+++++++++.++. .+.++.
T Consensus 307 ~v~~p~~~dQ~~na~~~~~-~G~g~~l~~~~---~~~~~l~~ai~~ll~----~~~~~~~~~~~~~~~~-----~~~~~~ 373 (404)
T 3h4t_A 307 QVVVPQKADQPYYAGRVAD-LGVGVAHDGPT---PTVESLSAALATALT----PGIRARAAAVAGTIRT-----DGTTVA 373 (404)
T ss_dssp EEECCCSTTHHHHHHHHHH-HTSEEECSSSS---CCHHHHHHHHHHHTS----HHHHHHHHHHHTTCCC-----CHHHHH
T ss_pred EEEcCCcccHHHHHHHHHH-CCCEeccCcCC---CCHHHHHHHHHHHhC----HHHHHHHHHHHHHHhh-----hHHHHH
Confidence 9999999999999999999 99999998776 899999999999995 5899999999887652 344444
Q ss_pred HHHHHHH
Q 012063 460 LSQLVHK 466 (471)
Q Consensus 460 ~~~~~~~ 466 (471)
++.+.+.
T Consensus 374 ~~~i~~~ 380 (404)
T 3h4t_A 374 AKLLLEA 380 (404)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444433
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1.2e-37 Score=305.87 Aligned_cols=351 Identities=15% Similarity=0.095 Sum_probs=234.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCC-C-----------
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNF-E----------- 73 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~----------- 73 (471)
|||++++.++.||++|+++||++|+++ ||+|++++++. ....... .+++++.++.... .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~-Gh~V~~~~~~~------~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNA-GHQVVMAANQD------MGPVVTG--VGLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECGG------GHHHHHH--TTCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHC-CCEEEEEeCHH------HHHHHHh--CCCEEEEeCCcchHHHHhhhcccCcc
Confidence 689999999999999999999999876 99999999762 2222221 2577777764320 0
Q ss_pred -c-ch-hHHHHH-HHHHHHhHHHHHHHHHHhhcCCCccEEEeCCCCccHHHHHHHhCCceEEEecchHHHHHHHhhcccc
Q 012063 74 -E-DV-KAEIQI-VLAIKRSLSSVRDVFKSLVASTHLMALVVDPFGTDVFDVAREFYVPSYLYFLTNALSLSLLHYMPKL 149 (471)
Q Consensus 74 -~-~~-~~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~ 149 (471)
. .. .....+ ..++..........+.+++++.+||+||+|.+..++..+|+.+|||++.+...+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~----------- 140 (384)
T 2p6p_A 72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD----------- 140 (384)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC-----------
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc-----------
Confidence 0 00 111111 11111111111122222334458999999988788888999999998876532100
Q ss_pred chhccccccCCCCcccCCCCCcCccCCCCCCCccCcCchHHHHHHHHHh--hcccCcEEEEccccccChHHHHHhhcCCC
Q 012063 150 DEVISCEVRDMEQPLKLPGFTIPIHGRDFPDPLQDRKNDAYRFMIQIRK--RYSLADGILINTFMELEPGVIKALQEEPS 227 (471)
Q Consensus 150 ~~~~~~~~~~~~~~~~~p~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~s~~~le~~~~~~~~~~~~ 227 (471)
..++ .+......+.+..... .....+.+++++.+.++... .. +
T Consensus 141 ----------------~~~~-------------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~-----~~-~ 185 (384)
T 2p6p_A 141 ----------------ADGI-------------HPGADAELRPELSELGLERLPAPDLFIDICPPSLRPAN-----AA-P 185 (384)
T ss_dssp ----------------CTTT-------------HHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT-----SC-C
T ss_pred ----------------cchh-------------hHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC-----CC-C
Confidence 0000 0000000111111110 01114567888877776431 11 1
Q ss_pred CCCeEEeccCcCCCCCCCccCCCCccccchhhhhccCCCccEEEEEeCCCcCC-----CHHhHHHHHHHHHhCCCceEEE
Q 012063 228 MRSIYPIGPIIRTVSDGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGGTL-----SYDQLEELALGLELSEQQFLWV 302 (471)
Q Consensus 228 ~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~~~-----~~~~~~~~~~al~~~~~~~~~~ 302 (471)
..++.++++ . .+.++.+|++..+++++|||++||.... ..+.+.+++++++..+.+++|+
T Consensus 186 ~~~~~~~~~-~--------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 250 (384)
T 2p6p_A 186 ARMMRHVAT-S--------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVA 250 (384)
T ss_dssp CEECCCCCC-C--------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEE
T ss_pred CCceEecCC-C--------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEE
Confidence 113344421 0 0124567887655568999999998654 4577889999999888999998
Q ss_pred EecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcchhhhhcCCcccccccccCchhHHHHHhhCCceee
Q 012063 303 VKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIA 382 (471)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~ 382 (471)
.+.... +.+. . .++|+.+ +|+||.++|++++ +||||||+||++||+++|+|+|+
T Consensus 251 ~g~~~~---------------------~~l~-~-~~~~v~~-~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~v~ 304 (384)
T 2p6p_A 251 APDTVA---------------------EALR-A-EVPQARV-GWTPLDVVAPTCD--LLVHHAGGVSTLTGLSAGVPQLL 304 (384)
T ss_dssp CCHHHH---------------------HHHH-H-HCTTSEE-ECCCHHHHGGGCS--EEEECSCTTHHHHHHHTTCCEEE
T ss_pred eCCCCH---------------------HhhC-C-CCCceEE-cCCCHHHHHhhCC--EEEeCCcHHHHHHHHHhCCCEEE
Confidence 764211 1111 1 2458999 9999999999888 99999999999999999999999
Q ss_pred ccccccchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHH
Q 012063 383 WPLYAEQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQ 462 (471)
Q Consensus 383 ~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~ 462 (471)
+|...||+.||.++++ .|+|+.+...+ ++.++|.++|+++|+| +++|++++++++.++. .++.++.++.
T Consensus 305 ~p~~~dq~~~a~~~~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~ 373 (384)
T 2p6p_A 305 IPKGSVLEAPARRVAD-YGAAIALLPGE---DSTEAIADSCQELQAK---DTYARRAQDLSREISG----MPLPATVVTA 373 (384)
T ss_dssp CCCSHHHHHHHHHHHH-HTSEEECCTTC---CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHT----SCCHHHHHHH
T ss_pred ccCcccchHHHHHHHH-CCCeEecCcCC---CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh----CCCHHHHHHH
Confidence 9999999999999999 99999998766 8999999999999998 8999999999999885 3444554443
Q ss_pred H
Q 012063 463 L 463 (471)
Q Consensus 463 ~ 463 (471)
+
T Consensus 374 i 374 (384)
T 2p6p_A 374 L 374 (384)
T ss_dssp H
T ss_pred H
Confidence 3
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.5e-37 Score=307.29 Aligned_cols=373 Identities=18% Similarity=0.170 Sum_probs=242.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCC--c-----chh
Q 012063 5 KHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFE--E-----DVK 77 (471)
Q Consensus 5 ~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~-----~~~ 77 (471)
++||++++.++.||++|+++|+++|+++ ||+|++++++... .... ..+++++.++..... . ...
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~-G~~V~~~~~~~~~------~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~ 77 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVAR-GHRVTYAIPPVFA------DKVA--ATGPRPVLYHSTLPGPDADPEAWGST 77 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGGGH------HHHH--TTSCEEEECCCCSCCTTSCGGGGCSS
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHC-CCeEEEEeCHHHH------HHHH--hCCCEEEEcCCcCccccccccccchh
Confidence 5799999999999999999999999876 9999999976321 1112 236888888753211 0 011
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhcCCCccEEEeCCCCccHHHHHHHhCCceEEEecchHHHHHHHhhccccchhccccc
Q 012063 78 AEIQIVLAIKRSLSSVRDVFKSLVASTHLMALVVDPFGTDVFDVAREFYVPSYLYFLTNALSLSLLHYMPKLDEVISCEV 157 (471)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 157 (471)
....+ ..+..........+.+++++.+||+||+|...+++..+|+.+|||++.+++........ ...+. ......
T Consensus 78 ~~~~~-~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~-~~~~~--~~~~~~- 152 (430)
T 2iyf_A 78 LLDNV-EPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGY-EEEVA--EPMWRE- 152 (430)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTH-HHHTH--HHHHHH-
T ss_pred hHHHH-HHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccc-ccccc--cchhhh-
Confidence 11111 11111122223334455566799999999877788889999999999888654210000 00000 000000
Q ss_pred cCCCCcccCCCCCcCccCCCCCCCccCcCchHHHHHHHHH-------hhcccCcEEEEccccccChHHHHHhhcCCCCCC
Q 012063 158 RDMEQPLKLPGFTIPIHGRDFPDPLQDRKNDAYRFMIQIR-------KRYSLADGILINTFMELEPGVIKALQEEPSMRS 230 (471)
Q Consensus 158 ~~~~~~~~~p~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~ 230 (471)
....++. ......+..+.... ......+.+++++.++++... ... +.+
T Consensus 153 -----~~~~~~~--------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~--~~~ 207 (430)
T 2iyf_A 153 -----PRQTERG--------------RAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA----DRV--DED 207 (430)
T ss_dssp -----HHHSHHH--------------HHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG----GGS--CTT
T ss_pred -----hccchHH--------------HHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc----ccC--CCc
Confidence 0000000 00000011111100 011135678888888877542 111 125
Q ss_pred -eEEeccCcCCCCCCCccCCCCccccchhhhhccCCCccEEEEEeCCCcCCCHHhHHHHHHHHHhC-CCceEEEEecCCC
Q 012063 231 -IYPIGPIIRTVSDGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGGTLSYDQLEELALGLELS-EQQFLWVVKSPDD 308 (471)
Q Consensus 231 -v~~vGpl~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~ 308 (471)
++++||+...... ..+|++..+++++|||++||......+.+.+++++++.. +.+++|.++.+..
T Consensus 208 ~v~~vG~~~~~~~~-------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~ 274 (430)
T 2iyf_A 208 VYTFVGACQGDRAE-------------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVT 274 (430)
T ss_dssp TEEECCCCC------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---C
T ss_pred cEEEeCCcCCCCCC-------------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCC
Confidence 9999986542211 124655444578999999999855667788899999886 7788888876432
Q ss_pred CCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcchhhhhcCCcccccccccCchhHHHHHhhCCceeecccccc
Q 012063 309 KSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIAWPLYAE 388 (471)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~D 388 (471)
......++ +|+.+.+|+||.++|++++ +||||||+||++||+++|+|+|++|..+|
T Consensus 275 -------------~~~l~~~~---------~~v~~~~~~~~~~~l~~ad--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~~ 330 (430)
T 2iyf_A 275 -------------PAELGELP---------DNVEVHDWVPQLAILRQAD--LFVTHAGAGGSQEGLATATPMIAVPQAVD 330 (430)
T ss_dssp -------------GGGGCSCC---------TTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEECCCSHH
T ss_pred -------------hHHhccCC---------CCeEEEecCCHHHHhhccC--EEEECCCccHHHHHHHhCCCEEECCCccc
Confidence 00111122 3899999999999999999 99999999999999999999999999999
Q ss_pred chhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHH
Q 012063 389 QRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLV 464 (471)
Q Consensus 389 Q~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 464 (471)
|+.|+.++++ .|+|+.+...+ ++.++|.++|.++++| ++++++++++++.+++. ++.++.++.+.
T Consensus 331 q~~~a~~~~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~i~ 395 (430)
T 2iyf_A 331 QFGNADMLQG-LGVARKLATEE---ATADLLRETALALVDD---PEVARRLRRIQAEMAQE----GGTRRAADLIE 395 (430)
T ss_dssp HHHHHHHHHH-TTSEEECCCC----CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHH----CHHHHHHHHHH
T ss_pred hHHHHHHHHH-cCCEEEcCCCC---CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHhc----CcHHHHHHHHH
Confidence 9999999999 99999998766 8999999999999998 88999999998887752 44455555443
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2.3e-35 Score=291.15 Aligned_cols=351 Identities=14% Similarity=0.094 Sum_probs=216.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCC----------
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFE---------- 73 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~---------- 73 (471)
.+|||++++.++.||++|++.|+++|.++ ||+|++++++. ....... .++.+..++.....
T Consensus 14 ~~MrIl~~~~~~~gh~~~~~~La~~L~~~-GheV~v~~~~~------~~~~~~~--~G~~~~~~~~~~~~~~~~~~~~~~ 84 (398)
T 4fzr_A 14 SHMRILVIAGCSEGFVMPLVPLSWALRAA-GHEVLVAASEN------MGPTVTG--AGLPFAPTCPSLDMPEVLSWDREG 84 (398)
T ss_dssp -CCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEEEGG------GHHHHHH--TTCCEEEEESSCCHHHHHSBCTTS
T ss_pred CceEEEEEcCCCcchHHHHHHHHHHHHHC-CCEEEEEcCHH------HHHHHHh--CCCeeEecCCccchHhhhhhhccC
Confidence 47999999999999999999999999876 99999999752 2222222 25667666531100
Q ss_pred -------cchhHHHHHHHHHHHhHHHHHHHHHHhhcCCCccEEEeCCCCccHHHHHHHhCCceEEEecchHHHHHHHhhc
Q 012063 74 -------EDVKAEIQIVLAIKRSLSSVRDVFKSLVASTHLMALVVDPFGTDVFDVAREFYVPSYLYFLTNALSLSLLHYM 146 (471)
Q Consensus 74 -------~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~ 146 (471)
............+..........+.+++++.+||+||+|...+++..+|+.+|||++.+............
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~-- 162 (398)
T 4fzr_A 85 NRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIKS-- 162 (398)
T ss_dssp CBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHHH--
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhhH--
Confidence 00111112222222222222222333344459999999987788888999999998876543211000000
Q ss_pred cccchhccccccCCCCcccCCCCCcCccCCCCCCCccCcCchHHHHHHHHHhh-----cccCcEEEEccccccChHHHHH
Q 012063 147 PKLDEVISCEVRDMEQPLKLPGFTIPIHGRDFPDPLQDRKNDAYRFMIQIRKR-----YSLADGILINTFMELEPGVIKA 221 (471)
Q Consensus 147 p~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~s~~~le~~~~~~ 221 (471)
.....+...... ....+..+......+....
T Consensus 163 -----------------------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 198 (398)
T 4fzr_A 163 -----------------------------------------AGVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQP--- 198 (398)
T ss_dssp -----------------------------------------HHHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC------
T ss_pred -----------------------------------------HHHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCC---
Confidence 000000000000 0111233333333333220
Q ss_pred hhcCCCCCCeEEeccCcCCCCCCCccCCCCccccchhhhhccCCCccEEEEEeCCCcCC--------CHHhHHHHHHHHH
Q 012063 222 LQEEPSMRSIYPIGPIIRTVSDGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGGTL--------SYDQLEELALGLE 293 (471)
Q Consensus 222 ~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~~~--------~~~~~~~~~~al~ 293 (471)
. .....+.++++.. ....+.+|+...+++++|||++||.... ..+.+..++++++
T Consensus 199 --~-~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~ 261 (398)
T 4fzr_A 199 --K-PGTTKMRYVPYNG--------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELP 261 (398)
T ss_dssp ----CCCEECCCCCCCC--------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGG
T ss_pred --C-CCCCCeeeeCCCC--------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHH
Confidence 0 0000122222110 1223456776555678999999998543 3456888999999
Q ss_pred hCCCceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcchhhhhcCCcccccccccCchhHHHH
Q 012063 294 LSEQQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLES 373 (471)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~ea 373 (471)
..+.+++|+.+.... .....+++ |+.+.+|+|+.++|++++ +||||||.||++||
T Consensus 262 ~~~~~~v~~~~~~~~--------------~~l~~~~~---------~v~~~~~~~~~~ll~~ad--~~v~~gG~~t~~Ea 316 (398)
T 4fzr_A 262 KLGFEVVVAVSDKLA--------------QTLQPLPE---------GVLAAGQFPLSAIMPACD--VVVHHGGHGTTLTC 316 (398)
T ss_dssp GGTCEEEECCCC----------------------CCT---------TEEEESCCCHHHHGGGCS--EEEECCCHHHHHHH
T ss_pred hCCCEEEEEeCCcch--------------hhhccCCC---------cEEEeCcCCHHHHHhhCC--EEEecCCHHHHHHH
Confidence 888899887765422 11122333 899999999999999999 99999999999999
Q ss_pred HhhCCceeeccccccchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcC
Q 012063 374 IVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDG 453 (471)
Q Consensus 374 l~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~ 453 (471)
+++|+|+|++|...||+.|+.++++ .|+|+.+...+ +++++|.++|+++|+| +++|+++++.++.+++ .
T Consensus 317 ~~~G~P~v~~p~~~~q~~~a~~~~~-~g~g~~~~~~~---~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~~----~ 385 (398)
T 4fzr_A 317 LSEGVPQVSVPVIAEVWDSARLLHA-AGAGVEVPWEQ---AGVESVLAACARIRDD---SSYVGNARRLAAEMAT----L 385 (398)
T ss_dssp HHTTCCEEECCCSGGGHHHHHHHHH-TTSEEECC----------CHHHHHHHHHHC---THHHHHHHHHHHHHTT----S
T ss_pred HHhCCCEEecCCchhHHHHHHHHHH-cCCEEecCccc---CCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHc----C
Confidence 9999999999999999999999999 99999998776 8999999999999998 8999999999988765 4
Q ss_pred CCHHHHHHH
Q 012063 454 GSSTKTLSQ 462 (471)
Q Consensus 454 g~~~~~~~~ 462 (471)
.+.++.++.
T Consensus 386 ~~~~~~~~~ 394 (398)
T 4fzr_A 386 PTPADIVRL 394 (398)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 454444443
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=5.8e-35 Score=288.18 Aligned_cols=345 Identities=15% Similarity=0.148 Sum_probs=225.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCC----------
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFE---------- 73 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~---------- 73 (471)
.+|||+|++.++.||++|++.|+++|.++ ||+|+++++ ... .... ..++.++.++.....
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~-~~~------~~~~--~~G~~~~~~~~~~~~~~~~~~~~~~ 88 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTA-GHDVLIAVA-EHA------DRAA--AAGLEVVDVAPDYSAVKVFEQVAKD 88 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEES-SCH------HHHH--TTTCEEEESSTTCCHHHHHHHHHHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHC-CCEEEEecc-chH------HHHH--hCCCeeEecCCccCHHHHhhhcccC
Confidence 46899999999999999999999999876 999999997 221 1111 237888888753210
Q ss_pred -------------c-chhHHHHHHHHHHHhHHHHHHHHHHhhcCCCccEEEeCCCCccHHHHHHHhCCceEEEecchHHH
Q 012063 74 -------------E-DVKAEIQIVLAIKRSLSSVRDVFKSLVASTHLMALVVDPFGTDVFDVAREFYVPSYLYFLTNALS 139 (471)
Q Consensus 74 -------------~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~ 139 (471)
. .......+..........+.+.++++ +||+||+|...+++..+|+.+|||++.........
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~ 164 (398)
T 3oti_A 89 NPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY----RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT 164 (398)
T ss_dssp CHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH----CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC
T ss_pred CccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc----CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc
Confidence 0 00111112222223334444444444 99999999888888889999999988755321000
Q ss_pred HHHHhhccccchhccccccCCCCcccCCCCCcCccCCCCCCCccCcCchHHHHHHHHHh-hcccCcEEEEccccccChHH
Q 012063 140 LSLLHYMPKLDEVISCEVRDMEQPLKLPGFTIPIHGRDFPDPLQDRKNDAYRFMIQIRK-RYSLADGILINTFMELEPGV 218 (471)
Q Consensus 140 ~~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~s~~~le~~~ 218 (471)
..+ ....+.... ....... .....+..+......+...
T Consensus 165 ---------------------------~~~---------~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~- 203 (398)
T 3oti_A 165 ---------------------------RGM---------HRSIASFLT----DLMDKHQVSLPEPVATIESFPPSLLLE- 203 (398)
T ss_dssp ---------------------------TTH---------HHHHHTTCH----HHHHHTTCCCCCCSEEECSSCGGGGTT-
T ss_pred ---------------------------cch---------hhHHHHHHH----HHHHHcCCCCCCCCeEEEeCCHHHCCC-
Confidence 000 000000000 0000000 0111122222222222211
Q ss_pred HHHhhcCCCCCCeEEeccCcCCCCCCCccCCCCccccchhhhhccCCCccEEEEEeCCCcCC--CHHhHHHHHHHHHhCC
Q 012063 219 IKALQEEPSMRSIYPIGPIIRTVSDGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGGTL--SYDQLEELALGLELSE 296 (471)
Q Consensus 219 ~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~~~--~~~~~~~~~~al~~~~ 296 (471)
.. .....+.++ |. ..+....+|+...+++++|||++||.... ..+.+.+++++++..+
T Consensus 204 ----~~-~~~~~~~~~-~~--------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~ 263 (398)
T 3oti_A 204 ----AE-PEGWFMRWV-PY--------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVD 263 (398)
T ss_dssp ----SC-CCSBCCCCC-CC--------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSS
T ss_pred ----CC-CCCCCcccc-CC--------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCC
Confidence 00 000011111 00 01123346766555678999999998432 5677889999999888
Q ss_pred CceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcchhhhhcCCcccccccccCchhHHHHHhh
Q 012063 297 QQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLESIVH 376 (471)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~eal~~ 376 (471)
.+++|+.+.... .....+++ |+.+.+|+|+.++|++++ +||||||.||++||+++
T Consensus 264 ~~~v~~~g~~~~--------------~~l~~~~~---------~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Eal~~ 318 (398)
T 3oti_A 264 ADFVLALGDLDI--------------SPLGTLPR---------NVRAVGWTPLHTLLRTCT--AVVHHGGGGTVMTAIDA 318 (398)
T ss_dssp SEEEEECTTSCC--------------GGGCSCCT---------TEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHH
T ss_pred CEEEEEECCcCh--------------hhhccCCC---------cEEEEccCCHHHHHhhCC--EEEECCCHHHHHHHHHh
Confidence 899988776422 11222333 899999999999999999 99999999999999999
Q ss_pred CCceeeccccccchhhH--HHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCC
Q 012063 377 GVPLIAWPLYAEQRLNA--VILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGG 454 (471)
Q Consensus 377 GvP~l~~P~~~DQ~~na--~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g 454 (471)
|+|+|++|+..||+.|| .++++ .|+|+.+...+ .+++.|. ++|+| +++|++++++++.+++ ..
T Consensus 319 G~P~v~~p~~~dq~~~a~~~~~~~-~g~g~~~~~~~---~~~~~l~----~ll~~---~~~~~~~~~~~~~~~~----~~ 383 (398)
T 3oti_A 319 GIPQLLAPDPRDQFQHTAREAVSR-RGIGLVSTSDK---VDADLLR----RLIGD---ESLRTAAREVREEMVA----LP 383 (398)
T ss_dssp TCCEEECCCTTCCSSCTTHHHHHH-HTSEEECCGGG---CCHHHHH----HHHHC---HHHHHHHHHHHHHHHT----SC
T ss_pred CCCEEEcCCCchhHHHHHHHHHHH-CCCEEeeCCCC---CCHHHHH----HHHcC---HHHHHHHHHHHHHHHh----CC
Confidence 99999999999999999 99999 99999998766 7888877 78888 8999999999998875 44
Q ss_pred CHHHHHHHH
Q 012063 455 SSTKTLSQL 463 (471)
Q Consensus 455 ~~~~~~~~~ 463 (471)
+.++.++.+
T Consensus 384 ~~~~~~~~l 392 (398)
T 3oti_A 384 TPAETVRRI 392 (398)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 545554444
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=9.3e-33 Score=271.78 Aligned_cols=351 Identities=14% Similarity=0.094 Sum_probs=224.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEc-CCCCCC----------
Q 012063 5 KHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLL-PPVNFE---------- 73 (471)
Q Consensus 5 ~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-p~~~~~---------- 73 (471)
+|||++++.++.||++|++.|+++|.++ ||+|++++++ ....... ..++.++.+ +.....
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~-GheV~v~~~~------~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQAS-GHEVLIAAPP------ELQATAH--GAGLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHT-TCEEEEEECH------HHHHHHH--HBTCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHC-CCEEEEecCh------hhHHHHH--hCCCceeeecCCccchhhhhhhcccc
Confidence 5899999999999999999999999775 9999999865 2222222 125677766 221100
Q ss_pred --------cchhHHHHHHHHHHHh---HHHHHHHHHHhhcCCCccEEEeCCCCccHHHHHHHhCCceEEEecchHHHHHH
Q 012063 74 --------EDVKAEIQIVLAIKRS---LSSVRDVFKSLVASTHLMALVVDPFGTDVFDVAREFYVPSYLYFLTNALSLSL 142 (471)
Q Consensus 74 --------~~~~~~~~~~~~~~~~---~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~ 142 (471)
........+....... .+.....+.+++++.+||+||+|...+.+..+|+.+|||++.+.......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~--- 148 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT--- 148 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT---
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc---
Confidence 0001111111111112 00112233333444599999999877777789999999988765321100
Q ss_pred HhhccccchhccccccCCCCcccCCCCCcCccCCCCCCCccCcCchHHHHHHHHHhhc-----ccCcEEEEccccccChH
Q 012063 143 LHYMPKLDEVISCEVRDMEQPLKLPGFTIPIHGRDFPDPLQDRKNDAYRFMIQIRKRY-----SLADGILINTFMELEPG 217 (471)
Q Consensus 143 ~~~~p~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~s~~~le~~ 217 (471)
.. .. ......++.+....+ ...+..+..+.++++..
T Consensus 149 ------------------------~~------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (391)
T 3tsa_A 149 ------------------------AG------------PF---SDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS 189 (391)
T ss_dssp ------------------------TT------------HH---HHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT
T ss_pred ------------------------cc------------cc---cchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC
Confidence 00 00 000011111111111 11134444444444322
Q ss_pred HHHHhhcCCCCCCeEEeccCcCCCCCCCccCCCCccccchhhhhccCCCccEEEEEeCCCcC--CC-HHhHHHHHHHHHh
Q 012063 218 VIKALQEEPSMRSIYPIGPIIRTVSDGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGGT--LS-YDQLEELALGLEL 294 (471)
Q Consensus 218 ~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~~--~~-~~~~~~~~~al~~ 294 (471)
... ....+.++ |. ..+.....|+...+++++||+++||... .. .+.+..++++ +.
T Consensus 190 -----~~~-~~~~~~~~-p~--------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~ 247 (391)
T 3tsa_A 190 -----DAP-QGAPVQYV-PY--------------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TE 247 (391)
T ss_dssp -----TSC-CCEECCCC-CC--------------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HT
T ss_pred -----CCC-ccCCeeee-cC--------------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-cc
Confidence 000 00022222 11 0112334677655567899999999833 23 6667888888 77
Q ss_pred C-CCceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcchhhhhcCCcccccccccCchhHHHH
Q 012063 295 S-EQQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLES 373 (471)
Q Consensus 295 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~ea 373 (471)
. +.+++|+.++... .....++ +|+.+.+|+|+.++|++++ +||||||.||++||
T Consensus 248 ~p~~~~v~~~~~~~~--------------~~l~~~~---------~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea 302 (391)
T 3tsa_A 248 LPGVEAVIAVPPEHR--------------ALLTDLP---------DNARIAESVPLNLFLRTCE--LVICAGGSGTAFTA 302 (391)
T ss_dssp STTEEEEEECCGGGG--------------GGCTTCC---------TTEEECCSCCGGGTGGGCS--EEEECCCHHHHHHH
T ss_pred CCCeEEEEEECCcch--------------hhcccCC---------CCEEEeccCCHHHHHhhCC--EEEeCCCHHHHHHH
Confidence 7 6688887765321 1111233 3899999999999998888 99999999999999
Q ss_pred HhhCCceeeccccccchhhHHHHHhhhcceeecCC--CCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhh
Q 012063 374 IVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPE--YENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVS 451 (471)
Q Consensus 374 l~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~--~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~ 451 (471)
+++|+|+|++|...||+.|+.++++ .|+|+.+.. .+ .+.++|.++|.++|+| ++++++++++++.+.+
T Consensus 303 ~~~G~P~v~~p~~~~q~~~a~~~~~-~g~g~~~~~~~~~---~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~~--- 372 (391)
T 3tsa_A 303 TRLGIPQLVLPQYFDQFDYARNLAA-AGAGICLPDEQAQ---SDHEQFTDSIATVLGD---TGFAAAAIKLSDEITA--- 372 (391)
T ss_dssp HHTTCCEEECCCSTTHHHHHHHHHH-TTSEEECCSHHHH---TCHHHHHHHHHHHHTC---THHHHHHHHHHHHHHT---
T ss_pred HHhCCCEEecCCcccHHHHHHHHHH-cCCEEecCccccc---CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHc---
Confidence 9999999999999999999999999 999999987 55 7899999999999998 8999999999888864
Q ss_pred cCCCHHHHHHHHH
Q 012063 452 DGGSSTKTLSQLV 464 (471)
Q Consensus 452 ~~g~~~~~~~~~~ 464 (471)
.++.++.++.+.
T Consensus 373 -~~~~~~~~~~i~ 384 (391)
T 3tsa_A 373 -MPHPAALVRTLE 384 (391)
T ss_dssp -SCCHHHHHHHHH
T ss_pred -CCCHHHHHHHHH
Confidence 455555555443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=4.1e-31 Score=261.85 Aligned_cols=356 Identities=15% Similarity=0.140 Sum_probs=232.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCC----------
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFE---------- 73 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~---------- 73 (471)
.+|||++++.++.||++|++.|+++|.++ ||+|++++++. ...... ..++.++.++.....
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~~-GheV~v~~~~~------~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~ 89 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARAA-GHEVTFATGEG------FAGTLR--KLGFEPVATGMPVFDGFLAALRIRF 89 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECGG------GHHHHH--HTTCEEEECCCCHHHHHHHHHHHHH
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHHC-CCEEEEEccHH------HHHHHH--hcCCceeecCcccccchhhhhhhhh
Confidence 47999999999999999999999999876 99999999762 222222 236888887641000
Q ss_pred --------cchhHHHHHHHHH-----HHhHHHHHHHHHHhhcCCCccEEEeCCCCccHHHHHHHhCCceEEEecchHHHH
Q 012063 74 --------EDVKAEIQIVLAI-----KRSLSSVRDVFKSLVASTHLMALVVDPFGTDVFDVAREFYVPSYLYFLTNALSL 140 (471)
Q Consensus 74 --------~~~~~~~~~~~~~-----~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~ 140 (471)
........+...+ ......+.+.++ +.+||+||+|....++..+|+.+|||++.........
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~- 164 (412)
T 3otg_A 90 DTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIE----RLRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP- 164 (412)
T ss_dssp SCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHH----HHCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC-
T ss_pred cccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHH----hcCCCEEEECchhhHHHHHHHHcCCCEEEecccccCc-
Confidence 0000000111111 112233333444 4499999999877777789999999988754321100
Q ss_pred HHHhhccccchhccccccCCCCcccCCCCCcCccCCCCCCCccCcCchHHHHHHHHHh-------hcccCcEEEEccccc
Q 012063 141 SLLHYMPKLDEVISCEVRDMEQPLKLPGFTIPIHGRDFPDPLQDRKNDAYRFMIQIRK-------RYSLADGILINTFME 213 (471)
Q Consensus 141 ~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~s~~~ 213 (471)
++. ..+....+..+..... .....+.++..+..+
T Consensus 165 --------------------------~~~-------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~ 205 (412)
T 3otg_A 165 --------------------------DDL-------------TRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPS 205 (412)
T ss_dssp --------------------------SHH-------------HHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGG
T ss_pred --------------------------hhh-------------hHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHH
Confidence 000 0000000000000000 012234455555444
Q ss_pred cChHHHHHhhcCCCCCCeEEeccCcCCCCCCCccCCCCccccchhhh-hccCCCccEEEEEeCCCcCCCHHhHHHHHHHH
Q 012063 214 LEPGVIKALQEEPSMRSIYPIGPIIRTVSDGELVDGSESHQCMCIRW-LDNQASGSVLFVSFGSGGTLSYDQLEELALGL 292 (471)
Q Consensus 214 le~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~w-l~~~~~~~~i~vs~GS~~~~~~~~~~~~~~al 292 (471)
++........ .+..+.++++- ......+| ....+++++||+++||......+.+.++++++
T Consensus 206 ~~~~~~~~~~---~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l 267 (412)
T 3otg_A 206 LQEPEFRARP---RRHELRPVPFA---------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGL 267 (412)
T ss_dssp GSCHHHHTCT---TEEECCCCCCC---------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHH
T ss_pred hcCCcccCCC---CcceeeccCCC---------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHH
Confidence 4432111000 00012222111 11223456 33234567999999999755677788999999
Q ss_pred HhCCCceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcchhhhhcCCcccccccccCchhHHH
Q 012063 293 ELSEQQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLE 372 (471)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~e 372 (471)
+..+.+++|+.+.... ......+++ |+.+.+|+|+.++|++++ +||+|||+||++|
T Consensus 268 ~~~~~~~~~~~g~~~~-------------~~~l~~~~~---------~v~~~~~~~~~~~l~~ad--~~v~~~g~~t~~E 323 (412)
T 3otg_A 268 AGLDADVLVASGPSLD-------------VSGLGEVPA---------NVRLESWVPQAALLPHVD--LVVHHGGSGTTLG 323 (412)
T ss_dssp HTSSSEEEEECCSSCC-------------CTTCCCCCT---------TEEEESCCCHHHHGGGCS--EEEESCCHHHHHH
T ss_pred HcCCCEEEEEECCCCC-------------hhhhccCCC---------cEEEeCCCCHHHHHhcCc--EEEECCchHHHHH
Confidence 9888899988876531 012222333 899999999999999999 9999999999999
Q ss_pred HHhhCCceeeccccccchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhc
Q 012063 373 SIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSD 452 (471)
Q Consensus 373 al~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~ 452 (471)
|+++|+|+|++|...||..|+.++++ .|+|+.+...+ +++++|.++|.++|+| +++++++++.++.+.+
T Consensus 324 a~a~G~P~v~~p~~~~q~~~~~~v~~-~g~g~~~~~~~---~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~~---- 392 (412)
T 3otg_A 324 ALGAGVPQLSFPWAGDSFANAQAVAQ-AGAGDHLLPDN---ISPDSVSGAAKRLLAE---ESYRAGARAVAAEIAA---- 392 (412)
T ss_dssp HHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECCGGG---CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH----
T ss_pred HHHhCCCEEecCCchhHHHHHHHHHH-cCCEEecCccc---CCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHhc----
Confidence 99999999999999999999999999 99999998776 7999999999999998 8999999998888775
Q ss_pred CCCHHHHHHHHHH
Q 012063 453 GGSSTKTLSQLVH 465 (471)
Q Consensus 453 ~g~~~~~~~~~~~ 465 (471)
..+.++.++.+.+
T Consensus 393 ~~~~~~~~~~~~~ 405 (412)
T 3otg_A 393 MPGPDEVVRLLPG 405 (412)
T ss_dssp SCCHHHHHTTHHH
T ss_pred CCCHHHHHHHHHH
Confidence 4565665555444
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.96 E-value=7.9e-28 Score=233.55 Aligned_cols=308 Identities=15% Similarity=0.053 Sum_probs=187.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCC--cchhHHHHHH
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFE--EDVKAEIQIV 83 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~~~~~~~~~~ 83 (471)
.+|++...++-||++|.++||++|.++ ||+|+|+++....+ ..+.. ..+++++.++..... ..........
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~-g~~V~~vg~~~g~e----~~~v~--~~g~~~~~i~~~~~~~~~~~~~~~~~~ 75 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQAR-GYAVHWLGTPRGIE----NDLVP--KAGLPLHLIQVSGLRGKGLKSLVKAPL 75 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECSSSTH----HHHTG--GGTCCEEECC--------------CHH
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhC-CCEEEEEECCchHh----hchhh--hcCCcEEEEECCCcCCCCHHHHHHHHH
Confidence 479998888889999999999999876 99999998764432 11222 125777777643221 0111111111
Q ss_pred HHHHHhHHHHHHHHHHhhcCCCccEEEeCCCCcc--HHHHHHHhCCceEEEecchHHHHHHHhhccccchhccccccCCC
Q 012063 84 LAIKRSLSSVRDVFKSLVASTHLMALVVDPFGTD--VFDVAREFYVPSYLYFLTNALSLSLLHYMPKLDEVISCEVRDME 161 (471)
Q Consensus 84 ~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 161 (471)
.. ..+.....+.+++. +||+||++..... +..+|+.+|||+++.-.
T Consensus 76 ~~-~~~~~~~~~~l~~~----~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~--------------------------- 123 (365)
T 3s2u_A 76 EL-LKSLFQALRVIRQL----RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ--------------------------- 123 (365)
T ss_dssp HH-HHHHHHHHHHHHHH----CCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC---------------------------
T ss_pred HH-HHHHHHHHHHHHhc----CCCEEEEcCCcchHHHHHHHHHcCCCEEEEec---------------------------
Confidence 11 11222333444444 9999998864433 34688999999775211
Q ss_pred CcccCCCCCcCccCCCCCCCccCcCchHHHHHHHHHhhcccCcEEEEccccccChHHHHHhhcCCCCCCeEEeccCcCCC
Q 012063 162 QPLKLPGFTIPIHGRDFPDPLQDRKNDAYRFMIQIRKRYSLADGILINTFMELEPGVIKALQEEPSMRSIYPIGPIIRTV 241 (471)
Q Consensus 162 ~~~~~p~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~v~~vGpl~~~~ 241 (471)
..+||+ .+.+ ..+.++.++ .++++.- ....+.+++|+.....
T Consensus 124 --n~~~G~--------------------~nr~-----l~~~a~~v~-~~~~~~~----------~~~~k~~~~g~pvr~~ 165 (365)
T 3s2u_A 124 --NAVAGT--------------------ANRS-----LAPIARRVC-EAFPDTF----------PASDKRLTTGNPVRGE 165 (365)
T ss_dssp --SSSCCH--------------------HHHH-----HGGGCSEEE-ESSTTSS----------CC---CEECCCCCCGG
T ss_pred --chhhhh--------------------HHHh-----hccccceee-ecccccc----------cCcCcEEEECCCCchh
Confidence 112443 0111 012223333 2332211 1122677788543322
Q ss_pred CCCCccCCCCccccchhhhhccCCCccEEEEEeCCCcCCCHHhHHHHHHHHHhCC----CceEEEEecCCCCCCCCcccc
Q 012063 242 SDGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGGTLSYDQLEELALGLELSE----QQFLWVVKSPDDKSASGSFFD 317 (471)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~~~~~~~~~~~~~al~~~~----~~~~~~~~~~~~~~~~~~~~~ 317 (471)
... +. ..+....+++++|+|..||.... ...+.+.++++... ..++|..+...
T Consensus 166 ~~~---------~~--~~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~~---------- 222 (365)
T 3s2u_A 166 LFL---------DA--HARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQH---------- 222 (365)
T ss_dssp GCC---------CT--TSSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTTT----------
T ss_pred hcc---------ch--hhhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCccc----------
Confidence 111 00 11111123456899999997543 22334556666553 34556554431
Q ss_pred CCCCCCCCCCCChhhHHhh--cCCCeeeccCcch-hhhhcCCcccccccccCchhHHHHHhhCCceeecccc----ccch
Q 012063 318 VHSKTDPFGFLPTGFLDRT--KEQGLVVPSWAPQ-VEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIAWPLY----AEQR 390 (471)
Q Consensus 318 ~~~~~~~~~~lp~~~~~~~--~~~~v~v~~~~pq-~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~----~DQ~ 390 (471)
.+...+.+ .+.++.+.+|+++ .++++.++ ++|||+|.+|+.|++++|+|+|++|+. .+|.
T Consensus 223 -----------~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aD--lvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~ 289 (365)
T 3s2u_A 223 -----------AEITAERYRTVAVEADVAPFISDMAAAYAWAD--LVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQT 289 (365)
T ss_dssp -----------HHHHHHHHHHTTCCCEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECC-----CCHHH
T ss_pred -----------cccccceecccccccccccchhhhhhhhccce--EEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHH
Confidence 12222222 2347788899998 47899999 999999999999999999999999974 5899
Q ss_pred hhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCC
Q 012063 391 LNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGE 430 (471)
Q Consensus 391 ~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 430 (471)
.||+.+++ .|+|+.+..++ +|+++|.++|.++++|+
T Consensus 290 ~NA~~l~~-~G~a~~l~~~~---~~~~~L~~~i~~ll~d~ 325 (365)
T 3s2u_A 290 RNAEFLVR-SGAGRLLPQKS---TGAAELAAQLSEVLMHP 325 (365)
T ss_dssp HHHHHHHT-TTSEEECCTTT---CCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHH-CCCEEEeecCC---CCHHHHHHHHHHHHCCH
Confidence 99999999 99999998887 99999999999999983
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.96 E-value=2.1e-28 Score=211.40 Aligned_cols=164 Identities=23% Similarity=0.390 Sum_probs=139.9
Q ss_pred CccccchhhhhccCCCccEEEEEeCCCc-CCCHHhHHHHHHHHHhCCCceEEEEecCCCCCCCCccccCCCCCCCCCCCC
Q 012063 251 ESHQCMCIRWLDNQASGSVLFVSFGSGG-TLSYDQLEELALGLELSEQQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLP 329 (471)
Q Consensus 251 ~~~~~~~~~wl~~~~~~~~i~vs~GS~~-~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp 329 (471)
+.++.++.+|++..+++++|||++||.. ....+.+..++++++..+.+++|+.+.... ..++
T Consensus 5 ~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~-----------------~~~~ 67 (170)
T 2o6l_A 5 KPLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKP-----------------DTLG 67 (170)
T ss_dssp CCCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCC-----------------TTCC
T ss_pred CCCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCc-----------------ccCC
Confidence 3567889999987666789999999985 456777889999999888899998865421 1233
Q ss_pred hhhHHhhcCCCeeeccCcchhhhhcCCcccccccccCchhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCC
Q 012063 330 TGFLDRTKEQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEY 409 (471)
Q Consensus 330 ~~~~~~~~~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~ 409 (471)
+ |+.+.+|+||.++|.|+++++||||||+||++||+++|+|+|++|...||+.||.++++ .|+|+.+...
T Consensus 68 ~---------~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~~ 137 (170)
T 2o6l_A 68 L---------NTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDFN 137 (170)
T ss_dssp T---------TEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCTT
T ss_pred C---------cEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEeccc
Confidence 3 89999999999999666666999999999999999999999999999999999999999 9999999877
Q ss_pred CCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 012063 410 ENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAA 447 (471)
Q Consensus 410 ~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~ 447 (471)
+ ++.++|.++|.++++| ++||++++++++.++
T Consensus 138 ~---~~~~~l~~~i~~ll~~---~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 138 T---MSSTDLLNALKRVIND---PSYKENVMKLSRIQH 169 (170)
T ss_dssp T---CCHHHHHHHHHHHHHC---HHHHHHHHHHC----
T ss_pred c---CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHhh
Confidence 6 8999999999999998 899999999998875
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.86 E-value=1.5e-19 Score=175.51 Aligned_cols=343 Identities=13% Similarity=0.056 Sum_probs=202.2
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCCcchhHHH
Q 012063 1 MAQVKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFEEDVKAEI 80 (471)
Q Consensus 1 m~~~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~ 80 (471)
|.+.+|+|++++.+..||..+.+.|+++|.++ ||+|+++++..... ..... ..+++++.++....... ....
T Consensus 2 M~~m~mkIl~~~~~~gG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~----~~~~~--~~g~~~~~~~~~~~~~~-~~~~ 73 (364)
T 1f0k_A 2 MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQ-GWQVRWLGTADRME----ADLVP--KHGIEIDFIRISGLRGK-GIKA 73 (364)
T ss_dssp -----CEEEEECCSSHHHHHHHHHHHHHHHTT-TCEEEEEECTTSTH----HHHGG--GGTCEEEECCCCCCTTC-CHHH
T ss_pred CCCCCcEEEEEeCCCccchhHHHHHHHHHHHc-CCEEEEEecCCcch----hhhcc--ccCCceEEecCCccCcC-ccHH
Confidence 34334899999988889999999999999765 99999999753221 11111 12577776654322111 0011
Q ss_pred HHHH--HHHHhHHHHHHHHHHhhcCCCccEEEeCCCC--ccHHHHHHHhCCceEEEecchHHHHHHHhhccccchhcccc
Q 012063 81 QIVL--AIKRSLSSVRDVFKSLVASTHLMALVVDPFG--TDVFDVAREFYVPSYLYFLTNALSLSLLHYMPKLDEVISCE 156 (471)
Q Consensus 81 ~~~~--~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~--~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 156 (471)
.+.. ........+.+.+++ .+||+|+++... ..+..+++.+|+|+++.....
T Consensus 74 ~~~~~~~~~~~~~~l~~~l~~----~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~-------------------- 129 (364)
T 1f0k_A 74 LIAAPLRIFNAWRQARAIMKA----YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG-------------------- 129 (364)
T ss_dssp HHTCHHHHHHHHHHHHHHHHH----HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS--------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC--------------------
Confidence 1100 011122233334443 499999998643 234467888999977532110
Q ss_pred ccCCCCcccCCCCCcCccCCCCCCCccCcCchHHHHHHHHHhhcccCcEEEEccccccChHHHHHhhcCCCCCCeEEecc
Q 012063 157 VRDMEQPLKLPGFTIPIHGRDFPDPLQDRKNDAYRFMIQIRKRYSLADGILINTFMELEPGVIKALQEEPSMRSIYPIGP 236 (471)
Q Consensus 157 ~~~~~~~~~~p~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~v~~vGp 236 (471)
.++. ... ...+.++.++..+-.. ++ ++..+|.
T Consensus 130 ---------~~~~--------------------~~~-----~~~~~~d~v~~~~~~~------------~~--~~~~i~n 161 (364)
T 1f0k_A 130 ---------IAGL--------------------TNK-----WLAKIATKVMQAFPGA------------FP--NAEVVGN 161 (364)
T ss_dssp ---------SCCH--------------------HHH-----HHTTTCSEEEESSTTS------------SS--SCEECCC
T ss_pred ---------CCcH--------------------HHH-----HHHHhCCEEEecChhh------------cC--CceEeCC
Confidence 0111 000 1122345555433211 11 4556664
Q ss_pred CcCCCCCCCccCCCCccccchhhhhccCCCccEEEEEeCCCcCCCHHhHHHHHHHHHhC--CCceEEEEecCCCCCCCCc
Q 012063 237 IIRTVSDGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGGTLSYDQLEELALGLELS--EQQFLWVVKSPDDKSASGS 314 (471)
Q Consensus 237 l~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~~~~~~~~~~~~~al~~~--~~~~~~~~~~~~~~~~~~~ 314 (471)
-....... .......+...+++++|++..|+... ......++++++.. +.++++.++.+..
T Consensus 162 ~v~~~~~~---------~~~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~~------ 224 (364)
T 1f0k_A 162 PVRTDVLA---------LPLPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGSQ------ 224 (364)
T ss_dssp CCCHHHHT---------SCCHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTCH------
T ss_pred ccchhhcc---------cchhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCchH------
Confidence 22211000 00111122222234578888888643 33344555666554 3455565654311
Q ss_pred cccCCCCCCCCCCCChhhHHh---hcCCCeeeccCcch-hhhhcCCcccccccccCchhHHHHHhhCCceeecccc---c
Q 012063 315 FFDVHSKTDPFGFLPTGFLDR---TKEQGLVVPSWAPQ-VEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIAWPLY---A 387 (471)
Q Consensus 315 ~~~~~~~~~~~~~lp~~~~~~---~~~~~v~v~~~~pq-~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~---~ 387 (471)
+.+.+. ..-+++.+.+|+++ ..+++.++ ++|+++|.+++.||+++|+|+|+.|.. .
T Consensus 225 ---------------~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad--~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~ 287 (364)
T 1f0k_A 225 ---------------QSVEQAYAEAGQPQHKVTEFIDDMAAAYAWAD--VVVCRSGALTVSEIAAAGLPALFVPFQHKDR 287 (364)
T ss_dssp ---------------HHHHHHHHHTTCTTSEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECCCCCTTC
T ss_pred ---------------HHHHHHHhhcCCCceEEecchhhHHHHHHhCC--EEEECCchHHHHHHHHhCCCEEEeeCCCCch
Confidence 223222 22247889999854 78899999 999999989999999999999999988 7
Q ss_pred cchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHH
Q 012063 388 EQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVHKW 467 (471)
Q Consensus 388 DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 467 (471)
||..|+..+++ .|.|+.++..+ ++.+++.++|.++ | ++.+++..+-++... +..+.++.++++.+-+
T Consensus 288 ~q~~~~~~~~~-~g~g~~~~~~d---~~~~~la~~i~~l--~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y 354 (364)
T 1f0k_A 288 QQYWNALPLEK-AGAAKIIEQPQ---LSVDAVANTLAGW--S---RETLLTMAERARAAS----IPDATERVANEVSRVA 354 (364)
T ss_dssp HHHHHHHHHHH-TTSEEECCGGG---CCHHHHHHHHHTC--C---HHHHHHHHHHHHHTC----CTTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHh-CCcEEEecccc---CCHHHHHHHHHhc--C---HHHHHHHHHHHHHhh----ccCHHHHHHHHHHHHH
Confidence 99999999999 89999988765 7799999999888 6 666655544443322 3466667777776666
Q ss_pred Hhc
Q 012063 468 KNQ 470 (471)
Q Consensus 468 ~~~ 470 (471)
.++
T Consensus 355 ~~~ 357 (364)
T 1f0k_A 355 RAL 357 (364)
T ss_dssp TTC
T ss_pred HHH
Confidence 554
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.67 E-value=1.1e-16 Score=141.53 Aligned_cols=132 Identities=14% Similarity=0.076 Sum_probs=95.7
Q ss_pred CCccEEEEEeCCCcCCCHHhHHHH-----HHHHHhCC-CceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHHhh--
Q 012063 265 ASGSVLFVSFGSGGTLSYDQLEEL-----ALGLELSE-QQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRT-- 336 (471)
Q Consensus 265 ~~~~~i~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-- 336 (471)
+++++|||+.||... -.+.+..+ +++|...+ .+++|.++.... . ..+.+.+.+
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~--------------~----~~~~~~~~~~~ 86 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS--------------S----EFEHLVQERGG 86 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC--------------C----CCCSHHHHHTC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch--------------h----hHHHHHHhhhc
Confidence 456799999999742 34444443 48887776 688888876432 0 011111010
Q ss_pred -------------------------cCCCeeeccCcchh-hhhc-CCcccccccccCchhHHHHHhhCCceeecccc---
Q 012063 337 -------------------------KEQGLVVPSWAPQV-EVLG-HPSTGGFLTHCGWNSTLESIVHGVPLIAWPLY--- 386 (471)
Q Consensus 337 -------------------------~~~~v~v~~~~pq~-~~L~-~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~--- 386 (471)
..-++.+.+|+++. ++|+ .++ ++|||||+||++|++++|+|+|++|..
T Consensus 87 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Ad--lvIshaGagTv~Eal~~G~P~IvVP~~~~~ 164 (224)
T 2jzc_A 87 QRESQKIPIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSD--LVISHAGTGSILDSLRLNKPLIVCVNDSLM 164 (224)
T ss_dssp EECSCCCSSCTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCS--CEEESSCHHHHHHHHHTTCCCCEECCSSCC
T ss_pred cccccccccccccccccccccccccCCceEEEeeccchHHHHHHhcCC--EEEECCcHHHHHHHHHhCCCEEEEcCcccc
Confidence 11245677888875 8899 999 999999999999999999999999985
Q ss_pred -ccchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHH
Q 012063 387 -AEQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGL 426 (471)
Q Consensus 387 -~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~ 426 (471)
.||..||+++++ .|+|+.+ +.++|.++|+++
T Consensus 165 ~~HQ~~nA~~l~~-~G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 165 DNHQQQIADKFVE-LGYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp CCHHHHHHHHHHH-HSCCCEE--------CSCTTTHHHHHH
T ss_pred cchHHHHHHHHHH-CCCEEEc--------CHHHHHHHHHHH
Confidence 479999999999 9998764 356677777766
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.54 E-value=4e-13 Score=123.77 Aligned_cols=116 Identities=9% Similarity=0.047 Sum_probs=89.2
Q ss_pred ccEEEEEeCCCcCCCHHhHHHHHHHHHhCCCceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHHhhc-CCCeeecc
Q 012063 267 GSVLFVSFGSGGTLSYDQLEELALGLELSEQQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTK-EQGLVVPS 345 (471)
Q Consensus 267 ~~~i~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~v~v~~ 345 (471)
.+.|+|++|... .......++++|.... ++.++.+.+.. ..+.+.+... .+|+.+..
T Consensus 157 ~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~~~-------------------~~~~l~~~~~~~~~v~v~~ 214 (282)
T 3hbm_A 157 KYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSSNP-------------------NLKKLQKFAKLHNNIRLFI 214 (282)
T ss_dssp CEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTTCT-------------------THHHHHHHHHTCSSEEEEE
T ss_pred CCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCCch-------------------HHHHHHHHHhhCCCEEEEe
Confidence 458999999753 2335567888886654 45555655421 2233433332 34899999
Q ss_pred Ccchh-hhhcCCcccccccccCchhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCC
Q 012063 346 WAPQV-EVLGHPSTGGFLTHCGWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPE 408 (471)
Q Consensus 346 ~~pq~-~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~ 408 (471)
|+++. +++..++ ++||+|| +|++|+++.|+|+|++|+..+|..||..+++ .|+++.+..
T Consensus 215 ~~~~m~~~m~~aD--lvI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~~ 274 (282)
T 3hbm_A 215 DHENIAKLMNESN--KLIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYKY 274 (282)
T ss_dssp SCSCHHHHHHTEE--EEEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECGG
T ss_pred CHHHHHHHHHHCC--EEEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcch
Confidence 99885 6889999 9999999 8999999999999999999999999999999 999998764
No 25
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.28 E-value=3.9e-11 Score=116.55 Aligned_cols=106 Identities=17% Similarity=0.180 Sum_probs=73.4
Q ss_pred CCeeeccCcch---hhhhcCCcccccccccCchhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCCCCCccC
Q 012063 339 QGLVVPSWAPQ---VEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLIK 415 (471)
Q Consensus 339 ~~v~v~~~~pq---~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~ 415 (471)
+++.+.+++++ ..+++.++ +||+.+| |.+.||+++|+|+|+.+..++++. +.+ .|.|+.+. .+
T Consensus 255 ~~v~~~g~~g~~~~~~~~~~ad--~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~-~g~g~lv~------~d 320 (376)
T 1v4v_A 255 RNFVLLDPLEYGSMAALMRASL--LLVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLK-AGILKLAG------TD 320 (376)
T ss_dssp TTEEEECCCCHHHHHHHHHTEE--EEEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHH-HTSEEECC------SC
T ss_pred CCEEEECCCCHHHHHHHHHhCc--EEEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhc-CCceEECC------CC
Confidence 47888866554 58888899 8999884 445699999999999887677665 345 68888774 36
Q ss_pred HHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHH
Q 012063 416 REEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVH 465 (471)
Q Consensus 416 ~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 465 (471)
.++|.++|.++++| ++.+++..+.+ +. ...++++++.++.+.+
T Consensus 321 ~~~la~~i~~ll~d---~~~~~~~~~~~---~~-~~~~~~~~~i~~~i~~ 363 (376)
T 1v4v_A 321 PEGVYRVVKGLLEN---PEELSRMRKAK---NP-YGDGKAGLMVARGVAW 363 (376)
T ss_dssp HHHHHHHHHHHHTC---HHHHHHHHHSC---CS-SCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC---hHhhhhhcccC---CC-CCCChHHHHHHHHHHH
Confidence 89999999999988 65554443321 11 1234555555554433
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.18 E-value=1.9e-08 Score=97.91 Aligned_cols=348 Identities=10% Similarity=-0.001 Sum_probs=178.5
Q ss_pred CCcEEEEEcC--C--CccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCCcchhHH
Q 012063 4 VKHHVACMPS--P--GMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFEEDVKAE 79 (471)
Q Consensus 4 ~~~~i~~~~~--p--~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~ 79 (471)
.+|+|++++. + ..|.-.-+..|++.| + ||+|+++++..... ...... ...++.++.++........
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~-g~~v~v~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~--- 72 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--D-PESIVVFASTQNAE--EAHAYD--KTLDYEVIRWPRSVMLPTP--- 72 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--C-GGGEEEEEECSSHH--HHHHHH--TTCSSEEEEESSSSCCSCH---
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--c-CCeEEEEECCCCcc--chhhhc--cccceEEEEccccccccch---
Confidence 4588888874 3 468888899999999 5 99999999753321 001111 1235777776543221111
Q ss_pred HHHHHHHHHhHHHHHHHHHHhhcCCCccEEEeCCCCcc--HHHHHHHhCCceEEEecchHHHHHHHhhccccchhccccc
Q 012063 80 IQIVLAIKRSLSSVRDVFKSLVASTHLMALVVDPFGTD--VFDVAREFYVPSYLYFLTNALSLSLLHYMPKLDEVISCEV 157 (471)
Q Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 157 (471)
.....+.+.+ ++.+||+|++...... ...+++.+++|.+++.......
T Consensus 73 --------~~~~~l~~~~----~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~------------------ 122 (394)
T 3okp_A 73 --------TTAHAMAEII----REREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV------------------ 122 (394)
T ss_dssp --------HHHHHHHHHH----HHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH------------------
T ss_pred --------hhHHHHHHHH----HhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh------------------
Confidence 1112233333 3448999997644333 3457888999855533221100
Q ss_pred cCCCCcccCCCCCcCccCCCCCCCccCcCchHHHHHHHHHhhcccCcEEEEccccccChHHHHHhhcCCCCCCeEEeccC
Q 012063 158 RDMEQPLKLPGFTIPIHGRDFPDPLQDRKNDAYRFMIQIRKRYSLADGILINTFMELEPGVIKALQEEPSMRSIYPIGPI 237 (471)
Q Consensus 158 ~~~~~~~~~p~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~v~~vGpl 237 (471)
.... ........ ....+.++.++..|-...+. +..... ...++..+.+-
T Consensus 123 -------~~~~------------------~~~~~~~~--~~~~~~~d~ii~~s~~~~~~-~~~~~~---~~~~~~vi~ng 171 (394)
T 3okp_A 123 -------GWSM------------------LPGSRQSL--RKIGTEVDVLTYISQYTLRR-FKSAFG---SHPTFEHLPSG 171 (394)
T ss_dssp -------HHTT------------------SHHHHHHH--HHHHHHCSEEEESCHHHHHH-HHHHHC---SSSEEEECCCC
T ss_pred -------hhhh------------------cchhhHHH--HHHHHhCCEEEEcCHHHHHH-HHHhcC---CCCCeEEecCC
Confidence 0000 00111111 12235567777666332221 111111 12256666543
Q ss_pred cCCCCCCCccCCCCccccchhhhhccCCCccEEEEEeCCCcCCCHHhHHHHHHHHHhC-----CCceEEEEecCCCCCCC
Q 012063 238 IRTVSDGELVDGSESHQCMCIRWLDNQASGSVLFVSFGSGGTLSYDQLEELALGLELS-----EQQFLWVVKSPDDKSAS 312 (471)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~i~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~~~~~~~~~~~~~~ 312 (471)
........ ........+.+-+.. +++..+++..|+... ...+..++++++.. +.++ ..++.+..
T Consensus 172 v~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~~l-~i~G~g~~---- 240 (394)
T 3okp_A 172 VDVKRFTP---ATPEDKSATRKKLGF-TDTTPVIACNSRLVP--RKGQDSLIKAMPQVIAARPDAQL-LIVGSGRY---- 240 (394)
T ss_dssp BCTTTSCC---CCHHHHHHHHHHTTC-CTTCCEEEEESCSCG--GGCHHHHHHHHHHHHHHSTTCEE-EEECCCTT----
T ss_pred cCHHHcCC---CCchhhHHHHHhcCC-CcCceEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEE-EEEcCchH----
Confidence 32221110 000001111222221 223366777888632 22234444444332 2333 33443221
Q ss_pred CccccCCCCCCCCCCCChhhHHhh--cCCCeeeccCcchhh---hhcCCccccccc-----------ccCchhHHHHHhh
Q 012063 313 GSFFDVHSKTDPFGFLPTGFLDRT--KEQGLVVPSWAPQVE---VLGHPSTGGFLT-----------HCGWNSTLESIVH 376 (471)
Q Consensus 313 ~~~~~~~~~~~~~~~lp~~~~~~~--~~~~v~v~~~~pq~~---~L~~~~~~~~It-----------HgG~~s~~eal~~ 376 (471)
.+.+.+.. ..+++.+.+|+|+.+ ++..++ ++|. -|.-+++.||+++
T Consensus 241 ----------------~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad--~~v~ps~~~~~~~~~e~~~~~~~Ea~a~ 302 (394)
T 3okp_A 241 ----------------ESTLRRLATDVSQNVKFLGRLEYQDMINTLAAAD--IFAMPARTRGGGLDVEGLGIVYLEAQAC 302 (394)
T ss_dssp ----------------HHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCS--EEEECCCCBGGGTBCCSSCHHHHHHHHT
T ss_pred ----------------HHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCC--EEEecCccccccccccccCcHHHHHHHc
Confidence 12222222 125899999997654 577788 6665 4555789999999
Q ss_pred CCceeeccccccchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHH-HHHHHHHhhcCCC
Q 012063 377 GVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRL-KDAAAAAVSDGGS 455 (471)
Q Consensus 377 GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l-~~~~~~~~~~~g~ 455 (471)
|+|+|+.+..+ ....+.+ |.|+.+... +.+++.++|.+++++ ++.+++..+- ++.+. +.-+
T Consensus 303 G~PvI~~~~~~----~~e~i~~--~~g~~~~~~-----d~~~l~~~i~~l~~~---~~~~~~~~~~~~~~~~----~~~s 364 (394)
T 3okp_A 303 GVPVIAGTSGG----APETVTP--ATGLVVEGS-----DVDKLSELLIELLDD---PIRRAAMGAAGRAHVE----AEWS 364 (394)
T ss_dssp TCCEEECSSTT----GGGGCCT--TTEEECCTT-----CHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHH----HHTB
T ss_pred CCCEEEeCCCC----hHHHHhc--CCceEeCCC-----CHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHH----HhCC
Confidence 99999976532 3333444 478877754 599999999999987 4433332222 22222 2346
Q ss_pred HHHHHHHHHHHHHh
Q 012063 456 STKTLSQLVHKWKN 469 (471)
Q Consensus 456 ~~~~~~~~~~~~~~ 469 (471)
-+...+++++-+.+
T Consensus 365 ~~~~~~~~~~~~~~ 378 (394)
T 3okp_A 365 WEIMGERLTNILQS 378 (394)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHH
Confidence 66666666665554
No 27
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.15 E-value=1.4e-08 Score=100.61 Aligned_cols=80 Identities=16% Similarity=0.086 Sum_probs=60.3
Q ss_pred CCCeeeccCcch---hhhhcCCcccccccc----cCchhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCCC
Q 012063 338 EQGLVVPSWAPQ---VEVLGHPSTGGFLTH----CGWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYE 410 (471)
Q Consensus 338 ~~~v~v~~~~pq---~~~L~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~ 410 (471)
.++|.+.+|+|+ ..++..++ ++|.- |.-++++||+++|+|+|+.+. ......+++ .+.|+.++..
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~-~~~g~~~~~~- 376 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAAD--IVAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAE-GETGLLVDGH- 376 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCS--EEEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCB-TTTEEEESSC-
T ss_pred CCcEEEcCCCChHHHHHHHHhCC--EEEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhC-CCcEEECCCC-
Confidence 358999999986 46677788 56643 234589999999999999754 334445555 5678887654
Q ss_pred CCccCHHHHHHHHHHHhCC
Q 012063 411 NGLIKREEIAKVIKGLMHG 429 (471)
Q Consensus 411 ~~~~~~~~l~~~i~~~l~~ 429 (471)
+.+++.++|.+++++
T Consensus 377 ----d~~~la~~i~~l~~~ 391 (438)
T 3c48_A 377 ----SPHAWADALATLLDD 391 (438)
T ss_dssp ----CHHHHHHHHHHHHHC
T ss_pred ----CHHHHHHHHHHHHcC
Confidence 599999999999987
No 28
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.14 E-value=3e-10 Score=110.93 Aligned_cols=103 Identities=14% Similarity=0.127 Sum_probs=71.0
Q ss_pred CCeeeccCcc---hhhhhcCCcccccccccCchhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCCCCCccC
Q 012063 339 QGLVVPSWAP---QVEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLIK 415 (471)
Q Consensus 339 ~~v~v~~~~p---q~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~ 415 (471)
+++.+.++++ ...+++.++ ++|+-.| |.+.||.++|+|+|+..-..+++ .+.+ .|.++.+. .+
T Consensus 288 ~~v~~~~~lg~~~~~~l~~~ad--~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~-~G~~~lv~------~d 353 (396)
T 3dzc_A 288 SNIVLIEPQQYLPFVYLMDRAH--IILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVA-AGTVKLVG------TN 353 (396)
T ss_dssp TTEEEECCCCHHHHHHHHHHCS--EEEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHH-HTSEEECT------TC
T ss_pred CCEEEeCCCCHHHHHHHHHhcC--EEEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHH-cCceEEcC------CC
Confidence 4788876664 457788888 8999988 66679999999999975555543 2455 68886664 25
Q ss_pred HHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHH
Q 012063 416 REEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQ 462 (471)
Q Consensus 416 ~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~ 462 (471)
.++|.+++.++++| ++.++++.+-... + ..++++++.++.
T Consensus 354 ~~~l~~ai~~ll~d---~~~~~~m~~~~~~---~-~~~~aa~ri~~~ 393 (396)
T 3dzc_A 354 QQQICDALSLLLTD---PQAYQAMSQAHNP---Y-GDGKACQRIADI 393 (396)
T ss_dssp HHHHHHHHHHHHHC---HHHHHHHHTSCCT---T-CCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHcC---HHHHHHHhhccCC---C-cCChHHHHHHHH
Confidence 89999999999988 6665544432222 1 235555554443
No 29
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.10 E-value=7.1e-10 Score=108.41 Aligned_cols=108 Identities=16% Similarity=0.119 Sum_probs=77.1
Q ss_pred CCeeeccCcc---hhhhhcCCcccccccccCchhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCCCCCccC
Q 012063 339 QGLVVPSWAP---QVEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLIK 415 (471)
Q Consensus 339 ~~v~v~~~~p---q~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~ 415 (471)
+++.+.++++ -..+++.++ ++|+-.| |.+.||.++|+|+|++|-.++++. +.+ .|.|+.+. .+
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~ad--~vv~~SG-g~~~EA~a~g~PvV~~~~~~~~~e----~v~-~g~~~lv~------~d 347 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRKSY--LVFTDSG-GVQEEAPGMGVPVLVLRDTTERPE----GIE-AGTLKLIG------TN 347 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHHEE--EEEECCH-HHHHHGGGTTCCEEECCSSCSCHH----HHH-HTSEEECC------SC
T ss_pred CCEEEeCCCCHHHHHHHHHhcC--EEEECCc-cHHHHHHHhCCCEEEecCCCcchh----hee-CCcEEEcC------CC
Confidence 5888888886 356778888 8998875 333699999999999976666654 345 68888775 35
Q ss_pred HHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHH
Q 012063 416 REEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVHKW 467 (471)
Q Consensus 416 ~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 467 (471)
.++|.+++.+++.+ ++.++++++-+ ..+ ..++++++.++.+.+.+
T Consensus 348 ~~~l~~ai~~ll~~---~~~~~~m~~~~---~~~-g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 348 KENLIKEALDLLDN---KESHDKMAQAA---NPY-GDGFAANRILAAIKSHF 392 (403)
T ss_dssp HHHHHHHHHHHHHC---HHHHHHHHHSC---CTT-CCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC---HHHHHHHHhhc---Ccc-cCCcHHHHHHHHHHHHh
Confidence 89999999999988 66655443322 222 34677777776665543
No 30
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.07 E-value=2.6e-08 Score=100.38 Aligned_cols=80 Identities=15% Similarity=0.042 Sum_probs=58.5
Q ss_pred CCCeeeccCcchh---hhhcCC----cccccccc---cC-chhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeec
Q 012063 338 EQGLVVPSWAPQV---EVLGHP----STGGFLTH---CG-WNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRP 406 (471)
Q Consensus 338 ~~~v~v~~~~pq~---~~L~~~----~~~~~ItH---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~ 406 (471)
.++|.+.+++|+. .++..+ + ++|.- -| -++++||+++|+|+|+... ......+.+ -..|+.+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~d--v~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~-~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGS--VFALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDG-GKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTC--EEEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGG-GTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCC--EEEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcC-CceEEEe
Confidence 4578899999764 456667 7 56632 23 3588999999999999754 234444555 4578887
Q ss_pred CCCCCCccCHHHHHHHHHHHhCC
Q 012063 407 PEYENGLIKREEIAKVIKGLMHG 429 (471)
Q Consensus 407 ~~~~~~~~~~~~l~~~i~~~l~~ 429 (471)
+.. +.+++.++|.+++++
T Consensus 407 ~~~-----d~~~la~~i~~ll~~ 424 (499)
T 2r60_A 407 DPE-----DPEDIARGLLKAFES 424 (499)
T ss_dssp CTT-----CHHHHHHHHHHHHSC
T ss_pred CCC-----CHHHHHHHHHHHHhC
Confidence 654 589999999999987
No 31
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.07 E-value=1.3e-09 Score=105.87 Aligned_cols=106 Identities=17% Similarity=0.171 Sum_probs=71.9
Q ss_pred CCeeeccCcch---hhhhcCCcccccccccCchhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCCCCCccC
Q 012063 339 QGLVVPSWAPQ---VEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLIK 415 (471)
Q Consensus 339 ~~v~v~~~~pq---~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~ 415 (471)
+++.+.+++++ .++++.++ +||+.+| +.++||+++|+|+|+.+..++.. .+.+ .|.|+.++. +
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad--~~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~----e~v~-~g~g~lv~~------d 328 (384)
T 1vgv_A 263 KNVILIDPQEYLPFVWLMNHAW--LILTDSG-GIQEEAPSLGKPVLVMRDTTERP----EAVT-AGTVRLVGT------D 328 (384)
T ss_dssp TTEEEECCCCHHHHHHHHHHCS--EEEESSS-TGGGTGGGGTCCEEEESSCCSCH----HHHH-HTSEEEECS------S
T ss_pred CCEEEeCCCCHHHHHHHHHhCc--EEEECCc-chHHHHHHcCCCEEEccCCCCcc----hhhh-CCceEEeCC------C
Confidence 57888666654 56788888 8999885 45889999999999998744433 3455 688888753 5
Q ss_pred HHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHH
Q 012063 416 REEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVH 465 (471)
Q Consensus 416 ~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 465 (471)
.+++.++|.++++| ++.+++..+ ..++. ....+.++.++.+.+
T Consensus 329 ~~~la~~i~~ll~d---~~~~~~~~~---~~~~~-~~~~~~~~i~~~~~~ 371 (384)
T 1vgv_A 329 KQRIVEEVTRLLKD---ENEYQAMSR---AHNPY-GDGQACSRILEALKN 371 (384)
T ss_dssp HHHHHHHHHHHHHC---HHHHHHHHS---SCCTT-CCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC---hHHHhhhhh---ccCCC-cCCCHHHHHHHHHHH
Confidence 89999999999988 554443322 22221 234555555554443
No 32
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.06 E-value=2e-07 Score=91.97 Aligned_cols=110 Identities=14% Similarity=0.034 Sum_probs=73.2
Q ss_pred CCeeeccCcchhh---hhcCCcccccccc----cCchhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCCCC
Q 012063 339 QGLVVPSWAPQVE---VLGHPSTGGFLTH----CGWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYEN 411 (471)
Q Consensus 339 ~~v~v~~~~pq~~---~L~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~ 411 (471)
+++.+.+|+++.+ ++..++ ++|.- |--+++.||+++|+|+|+... ......++. |.|..++..
T Consensus 311 ~~~~~~g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~~~--~~g~~~~~~-- 380 (439)
T 3fro_A 311 NVKVITEMLSREFVRELYGSVD--FVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIITN--ETGILVKAG-- 380 (439)
T ss_dssp TEEEECSCCCHHHHHHHHTTCS--EEEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHCCT--TTCEEECTT--
T ss_pred CEEEEcCCCCHHHHHHHHHHCC--EEEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeEEc--CceEEeCCC--
Confidence 5666788899854 577788 55532 334689999999999999654 333333334 688888764
Q ss_pred CccCHHHHHHHHHHHhC-CCc-hHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHh
Q 012063 412 GLIKREEIAKVIKGLMH-GED-GVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVHKWKN 469 (471)
Q Consensus 412 ~~~~~~~l~~~i~~~l~-~~~-~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 469 (471)
+.+++.++|.++++ +++ ...+.+++++..+ .-+-+..++++++-+.+
T Consensus 381 ---d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 381 ---DPGELANAILKALELSRSDLSKFRENCKKRAM--------SFSWEKSAERYVKAYTG 429 (439)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHH--------TSCHHHHHHHHHHHHHT
T ss_pred ---CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh--------hCcHHHHHHHHHHHHHH
Confidence 59999999999998 633 3444444444332 25666666666665544
No 33
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.06 E-value=9.5e-08 Score=93.33 Aligned_cols=111 Identities=12% Similarity=0.132 Sum_probs=73.9
Q ss_pred CCCeeeccCcch---hhhhcCCccccccc----ccCch-hHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCC
Q 012063 338 EQGLVVPSWAPQ---VEVLGHPSTGGFLT----HCGWN-STLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEY 409 (471)
Q Consensus 338 ~~~v~v~~~~pq---~~~L~~~~~~~~It----HgG~~-s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~ 409 (471)
.+++.+.+|+++ .+++..++ ++|. +.|++ ++.||+++|+|+|+.+. ......+.+ .+.|+.++..
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~-~~~g~~~~~~ 334 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSAD--VYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLAD-GDAGRLVPVD 334 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSS--EEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTT-TTSSEECCTT
T ss_pred cCcEEEEecCCHHHHHHHHHHCC--EEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcC-CCceEEeCCC
Confidence 458999999997 47788888 5553 34444 89999999999999765 445555665 5678887654
Q ss_pred CCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHH
Q 012063 410 ENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVHKW 467 (471)
Q Consensus 410 ~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 467 (471)
+.+++.++|.+++++ ++.+++.. +..++.+. .-+-+...+++.+-+
T Consensus 335 -----d~~~l~~~i~~l~~~---~~~~~~~~---~~~~~~~~-~~s~~~~~~~~~~~~ 380 (406)
T 2gek_A 335 -----DADGMAAALIGILED---DQLRAGYV---ARASERVH-RYDWSVVSAQIMRVY 380 (406)
T ss_dssp -----CHHHHHHHHHHHHHC---HHHHHHHH---HHHHHHGG-GGBHHHHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHcC---HHHHHHHH---HHHHHHHH-hCCHHHHHHHHHHHH
Confidence 589999999999987 54443322 22222222 345455555444433
No 34
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.03 E-value=4.6e-07 Score=88.18 Aligned_cols=111 Identities=14% Similarity=0.087 Sum_probs=71.4
Q ss_pred CCeeeccCcch-hhhhcCCcccccc----cccCchhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCCCCCc
Q 012063 339 QGLVVPSWAPQ-VEVLGHPSTGGFL----THCGWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGL 413 (471)
Q Consensus 339 ~~v~v~~~~pq-~~~L~~~~~~~~I----tHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~ 413 (471)
++|.+.++..+ ..++..++ ++| .-|.-+++.||+++|+|+|+.+..+ ....+++ .+.|+.++..
T Consensus 267 ~~v~~~g~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v~~-~~~g~~~~~~---- 335 (394)
T 2jjm_A 267 DRVLFLGKQDNVAELLAMSD--LMLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVIQH-GDTGYLCEVG---- 335 (394)
T ss_dssp GGBCCCBSCSCTHHHHHTCS--EEEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTCCB-TTTEEEECTT----
T ss_pred CeEEEeCchhhHHHHHHhCC--EEEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHhhc-CCceEEeCCC----
Confidence 46777776544 57788888 666 4455678999999999999976532 2333444 4577777654
Q ss_pred cCHHHHHHHHHHHhCCCchHHHHHHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHHH
Q 012063 414 IKREEIAKVIKGLMHGEDGVIIRDRMNR-LKDAAAAAVSDGGSSTKTLSQLVHKWK 468 (471)
Q Consensus 414 ~~~~~l~~~i~~~l~~~~~~~~r~~a~~-l~~~~~~~~~~~g~~~~~~~~~~~~~~ 468 (471)
+.+++.++|.+++++ ++.+++..+ .++.+. +.-+-+...+++.+-+.
T Consensus 336 -d~~~la~~i~~l~~~---~~~~~~~~~~~~~~~~----~~~s~~~~~~~~~~~~~ 383 (394)
T 2jjm_A 336 -DTTGVADQAIQLLKD---EELHRNMGERARESVY----EQFRSEKIVSQYETIYY 383 (394)
T ss_dssp -CHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH----HHSCHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHH----HhCCHHHHHHHHHHHHH
Confidence 589999999999987 444333222 222221 23455555555555444
No 35
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.94 E-value=3e-08 Score=95.86 Aligned_cols=106 Identities=18% Similarity=0.160 Sum_probs=70.7
Q ss_pred CCeeeccCcch---hhhhcCCcccccccccCchhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCCCCCccC
Q 012063 339 QGLVVPSWAPQ---VEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLIK 415 (471)
Q Consensus 339 ~~v~v~~~~pq---~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~ 415 (471)
+++.+.+++++ ..+++.++ +||+.+| +.+.||+++|+|+|+....+..+ .+.+ .|.|+.++. +
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad--~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e~v~-~g~g~~v~~------d 328 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSY--LMLTDSG-GVQEEAPSLGVPVLVLRDTTERP----EGIE-AGTLKLAGT------D 328 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCS--EEEECCH-HHHHHHHHHTCCEEECSSCCSCH----HHHH-TTSEEECCS------C
T ss_pred CCEEEeCCCCHHHHHHHHHhCc--EEEECCC-ChHHHHHhcCCCEEEecCCCCCc----eeec-CCceEEcCC------C
Confidence 58888777665 46778888 8888874 55889999999999985433332 3445 578888752 5
Q ss_pred HHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHH
Q 012063 416 REEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVH 465 (471)
Q Consensus 416 ~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 465 (471)
.+++.++|.++++| ++.+++.. +..++. .++.+.++.++.+.+
T Consensus 329 ~~~la~~i~~ll~~---~~~~~~~~---~~~~~~-~~~~~~~~i~~~~~~ 371 (375)
T 3beo_A 329 EETIFSLADELLSD---KEAHDKMS---KASNPY-GDGRASERIVEAILK 371 (375)
T ss_dssp HHHHHHHHHHHHHC---HHHHHHHC---CCCCTT-CCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC---hHhHhhhh---hcCCCC-CCCcHHHHHHHHHHH
Confidence 89999999999988 55554332 222222 124555555555444
No 36
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.89 E-value=1.9e-06 Score=83.04 Aligned_cols=136 Identities=16% Similarity=0.166 Sum_probs=88.7
Q ss_pred ccEEEEEeCCCcCCCHHhHHHHHHHHHhCCCc-----eEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHH---hhc-
Q 012063 267 GSVLFVSFGSGGTLSYDQLEELALGLELSEQQ-----FLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLD---RTK- 337 (471)
Q Consensus 267 ~~~i~vs~GS~~~~~~~~~~~~~~al~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~---~~~- 337 (471)
+..+++..|+... ...+..++++++..... -++.+|.+.. +.+.+ +..
T Consensus 195 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~---------------------~~~~~~~~~~~~ 251 (374)
T 2iw1_A 195 QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDKP---------------------RKFEALAEKLGV 251 (374)
T ss_dssp TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC---------------------HHHHHHHHHHTC
T ss_pred CCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCCH---------------------HHHHHHHHHcCC
Confidence 3467777887642 23456677777765422 2344444211 22222 222
Q ss_pred CCCeeeccCcch-hhhhcCCccccccc----ccCchhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCCCCC
Q 012063 338 EQGLVVPSWAPQ-VEVLGHPSTGGFLT----HCGWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENG 412 (471)
Q Consensus 338 ~~~v~v~~~~pq-~~~L~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~ 412 (471)
.+++.+.++..+ .+++..++ ++|. -|.-+++.||+++|+|+|+.+. ..+...+++ .+.|+.+...
T Consensus 252 ~~~v~~~g~~~~~~~~~~~ad--~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~-~~~g~~~~~~--- 321 (374)
T 2iw1_A 252 RSNVHFFSGRNDVSELMAAAD--LLLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIAD-ANCGTVIAEP--- 321 (374)
T ss_dssp GGGEEEESCCSCHHHHHHHCS--EEEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHH-HTCEEEECSS---
T ss_pred CCcEEECCCcccHHHHHHhcC--EEEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhcc-CCceEEeCCC---
Confidence 357888887554 66788888 6664 4566789999999999999765 345566777 7889888622
Q ss_pred ccCHHHHHHHHHHHhCCCchHHHHHHH
Q 012063 413 LIKREEIAKVIKGLMHGEDGVIIRDRM 439 (471)
Q Consensus 413 ~~~~~~l~~~i~~~l~~~~~~~~r~~a 439 (471)
-+.+++.++|.+++++ ++.+++.
T Consensus 322 -~~~~~l~~~i~~l~~~---~~~~~~~ 344 (374)
T 2iw1_A 322 -FSQEQLNEVLRKALTQ---SPLRMAW 344 (374)
T ss_dssp -CCHHHHHHHHHHHHHC---HHHHHHH
T ss_pred -CCHHHHHHHHHHHHcC---hHHHHHH
Confidence 3699999999999987 5544433
No 37
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.84 E-value=2.3e-07 Score=88.51 Aligned_cols=126 Identities=13% Similarity=0.033 Sum_probs=77.8
Q ss_pred EEEEeCCCcCCCHHhHHHHHHHHHhCCCceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcch
Q 012063 270 LFVSFGSGGTLSYDQLEELALGLELSEQQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAPQ 349 (471)
Q Consensus 270 i~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~pq 349 (471)
+++..|+.. ....+..++++++..+.+++ .+|.+.. ...-..+.++.. +++.+.+|+++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~-i~G~g~~-----------------~~~l~~~~~~~~-~~v~~~g~~~~ 222 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLV-LAGPAWE-----------------PEYFDEITRRYG-STVEPIGEVGG 222 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEE-EESCCCC-----------------HHHHHHHHHHHT-TTEEECCCCCH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEE-EEeCccc-----------------HHHHHHHHHHhC-CCEEEeccCCH
Confidence 455567754 23446677777777655544 3443221 000012222333 68999999997
Q ss_pred h---hhhcCCcccccc--cc-----------cC-chhHHHHHhhCCceeeccccccchhhHHHHHhh-hcceeecCCCCC
Q 012063 350 V---EVLGHPSTGGFL--TH-----------CG-WNSTLESIVHGVPLIAWPLYAEQRLNAVILSED-LNVALRPPEYEN 411 (471)
Q Consensus 350 ~---~~L~~~~~~~~I--tH-----------gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~-~G~g~~~~~~~~ 411 (471)
. +++..++ ++| +. -| -+++.||+++|+|+|+....+ +...+++. -+.|+.++.
T Consensus 223 ~~l~~~~~~ad--v~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~----~~e~~~~~~~~~g~~~~~--- 293 (342)
T 2iuy_A 223 ERRLDLLASAH--AVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGC----LAEIVPSVGEVVGYGTDF--- 293 (342)
T ss_dssp HHHHHHHHHCS--EEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTT----HHHHGGGGEEECCSSSCC---
T ss_pred HHHHHHHHhCC--EEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCC----hHHHhcccCCCceEEcCC---
Confidence 5 7788888 555 22 33 357999999999999987532 33333320 135666653
Q ss_pred CccCHHHHHHHHHHHhC
Q 012063 412 GLIKREEIAKVIKGLMH 428 (471)
Q Consensus 412 ~~~~~~~l~~~i~~~l~ 428 (471)
+.+++.++|.++++
T Consensus 294 ---d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 294 ---APDEARRTLAGLPA 307 (342)
T ss_dssp ---CHHHHHHHHHTSCC
T ss_pred ---CHHHHHHHHHHHHH
Confidence 48999999999886
No 38
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.75 E-value=2e-08 Score=97.34 Aligned_cols=158 Identities=13% Similarity=0.101 Sum_probs=95.4
Q ss_pred ccEEEEEeCCCcCCCH-HhHHHHHHHHHhC----CCceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHHh---h-c
Q 012063 267 GSVLFVSFGSGGTLSY-DQLEELALGLELS----EQQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDR---T-K 337 (471)
Q Consensus 267 ~~~i~vs~GS~~~~~~-~~~~~~~~al~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~---~-~ 337 (471)
++.|+++.|.....+. +.+..+++++... +..+++....... +.+.+. . .
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~~---------------------~~l~~~~~~~~~ 261 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRTK---------------------KRLEDLEGFKEL 261 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHHH---------------------HHHHTSGGGGGT
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHHH---------------------HHHHHHHHHhcC
Confidence 5689999887644332 4466677776543 4556665432110 111111 1 1
Q ss_pred CCCeeeccCcc---hhhhhcCCcccccccccCchhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCCCCCcc
Q 012063 338 EQGLVVPSWAP---QVEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLI 414 (471)
Q Consensus 338 ~~~v~v~~~~p---q~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~ 414 (471)
.+++.+.+.++ ...++++++ ++||-.|. .+.||.+.|+|+|+++...+.+. ..+ .|.++.+. .
T Consensus 262 ~~~v~l~~~lg~~~~~~l~~~ad--lvvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~-~G~~~lv~------~ 327 (385)
T 4hwg_A 262 GDKIRFLPAFSFTDYVKLQMNAF--CILSDSGT-ITEEASILNLPALNIREAHERPE----GMD-AGTLIMSG------F 327 (385)
T ss_dssp GGGEEECCCCCHHHHHHHHHHCS--EEEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHH-HTCCEECC------S
T ss_pred CCCEEEEcCCCHHHHHHHHHhCc--EEEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhh-cCceEEcC------C
Confidence 24777765554 457888899 99999875 47999999999999987554332 245 68887764 3
Q ss_pred CHHHHHHHHHHHhCCCc-hHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Q 012063 415 KREEIAKVIKGLMHGED-GVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVHK 466 (471)
Q Consensus 415 ~~~~l~~~i~~~l~~~~-~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 466 (471)
+.++|.+++.++++|+. .+.+++++.. + +..|+++++.++.+.+.
T Consensus 328 d~~~i~~ai~~ll~d~~~~~~m~~~~~~----~---~g~g~aa~rI~~~l~~~ 373 (385)
T 4hwg_A 328 KAERVLQAVKTITEEHDNNKRTQGLVPD----Y---NEAGLVSKKILRIVLSY 373 (385)
T ss_dssp SHHHHHHHHHHHHTTCBTTBCCSCCCHH----H---HTCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhChHHHHHhhccCCC----C---CCCChHHHHHHHHHHHH
Confidence 68999999999998743 2223222221 1 02467777766655443
No 39
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.58 E-value=1.4e-05 Score=78.15 Aligned_cols=111 Identities=12% Similarity=0.042 Sum_probs=72.1
Q ss_pred CCCeeeccCcc---h---hhhhcCCccccccccc----CchhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecC
Q 012063 338 EQGLVVPSWAP---Q---VEVLGHPSTGGFLTHC----GWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPP 407 (471)
Q Consensus 338 ~~~v~v~~~~p---q---~~~L~~~~~~~~ItHg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~ 407 (471)
.++|.+.+|++ + .+++..++ ++|.-. .-+++.||+++|+|+|+.+. ..+...+++ -+.|+.++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad--~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~-~~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASD--VILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVD-GETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCS--EEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCB-TTTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCC--EEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheec-CCCeEEEC
Confidence 35888888765 2 45677788 666543 45689999999999999764 334455555 56777764
Q ss_pred CCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHH-HHHHHHHhhcCCCHHHHHHHHHHHHHh
Q 012063 408 EYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRL-KDAAAAAVSDGGSSTKTLSQLVHKWKN 469 (471)
Q Consensus 408 ~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l-~~~~~~~~~~~g~~~~~~~~~~~~~~~ 469 (471)
+.+++.++|.++++| ++.+++..+- ++.+. +.-+-+..++++.+-+.+
T Consensus 365 -------d~~~la~~i~~ll~~---~~~~~~~~~~a~~~~~----~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 365 -------DANEAVEVVLYLLKH---PEVSKEMGAKAKERVR----KNFIITKHMERYLDILNS 413 (416)
T ss_dssp -------SHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH----HHTBHHHHHHHHHHHHHT
T ss_pred -------CHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHH----HHcCHHHHHHHHHHHHHH
Confidence 489999999999987 5544332222 22222 234556666666665544
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.39 E-value=3.4e-05 Score=77.13 Aligned_cols=108 Identities=7% Similarity=-0.033 Sum_probs=68.0
Q ss_pred CCee-eccCcch--hhhhcCCccccccc----ccCchhHHHHHhhCCceeeccccccchhhHHHHHhhh---------cc
Q 012063 339 QGLV-VPSWAPQ--VEVLGHPSTGGFLT----HCGWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDL---------NV 402 (471)
Q Consensus 339 ~~v~-v~~~~pq--~~~L~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~---------G~ 402 (471)
.++. +.++..+ ..++..++ +||. -|--.+++||+++|+|+|+.... .....+.+ - +.
T Consensus 346 ~~v~~~~g~~~~~~~~~~~~ad--v~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e~v~~-~~~~~~~~~~~~ 418 (485)
T 1rzu_A 346 GRVGVAIGYNEPLSHLMQAGCD--AIIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLADTVID-ANHAALASKAAT 418 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCB-CCHHHHHTTCCC
T ss_pred CcEEEecCCCHHHHHHHHhcCC--EEEECcccCCCCHHHHHHHHCCCCEEEeCCC----Chhheecc-cccccccccCCc
Confidence 5776 6777333 25688888 6663 23346899999999999997653 33333444 3 57
Q ss_pred eeecCCCCCCccCHHHHHHHHHHHh---CCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHH
Q 012063 403 ALRPPEYENGLIKREEIAKVIKGLM---HGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVHKW 467 (471)
Q Consensus 403 g~~~~~~~~~~~~~~~l~~~i~~~l---~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 467 (471)
|+.++.. +.+++.++|.+++ +| ++.+++.. +..++ +.-+-+...+++++-+
T Consensus 419 G~l~~~~-----d~~~la~~i~~ll~~~~~---~~~~~~~~---~~~~~---~~fs~~~~~~~~~~~y 472 (485)
T 1rzu_A 419 GVQFSPV-----TLDGLKQAIRRTVRYYHD---PKLWTQMQ---KLGMK---SDVSWEKSAGLYAALY 472 (485)
T ss_dssp BEEESSC-----SHHHHHHHHHHHHHHHTC---HHHHHHHH---HHHHT---CCCBHHHHHHHHHHHH
T ss_pred ceEeCCC-----CHHHHHHHHHHHHHHhCC---HHHHHHHH---HHHHH---HhCChHHHHHHHHHHH
Confidence 8777654 5899999999999 66 44443322 22221 3456566555555443
No 41
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.31 E-value=0.0019 Score=65.68 Aligned_cols=112 Identities=12% Similarity=0.028 Sum_probs=70.4
Q ss_pred CCeeeccCcchh---hhhcCCcccccc---cccCchhHHHHHhhCCceeeccccccchh-hHHHHHhhhcceeecCCCCC
Q 012063 339 QGLVVPSWAPQV---EVLGHPSTGGFL---THCGWNSTLESIVHGVPLIAWPLYAEQRL-NAVILSEDLNVALRPPEYEN 411 (471)
Q Consensus 339 ~~v~v~~~~pq~---~~L~~~~~~~~I---tHgG~~s~~eal~~GvP~l~~P~~~DQ~~-na~~~~~~~G~g~~~~~~~~ 411 (471)
++|++.+++|+. .++..++ +|| ..|+-++++||+++|+|+|++|-..=... -+..+.. .|+.-.+..
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~~--- 507 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHAD--LFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNVA--- 507 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBCS---
T ss_pred hHEEeeCCCCHHHHHHHHhcCC--EEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhcC---
Confidence 578899999854 5577788 565 12566789999999999999764311111 1344555 676655532
Q ss_pred CccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHh--hcCCCHHHHHHHHHH
Q 012063 412 GLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAV--SDGGSSTKTLSQLVH 465 (471)
Q Consensus 412 ~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~--~~~g~~~~~~~~~~~ 465 (471)
+.+++.+++.++++| ++.+++..+ ..++.+ .+.-+.+...+++.+
T Consensus 508 ---~~~~la~~i~~l~~~---~~~~~~~~~---~~~~~~~~~~~f~~~~~~~~~~~ 554 (568)
T 2vsy_A 508 ---DDAAFVAKAVALASD---PAALTALHA---RVDVLRRASGVFHMDGFADDFGA 554 (568)
T ss_dssp ---SHHHHHHHHHHHHHC---HHHHHHHHH---HHHHHHHHSSTTCHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHhcC---HHHHHHHHH---HHHHhhhcCCCCCHHHHHHHHHH
Confidence 689999999999988 555443332 222222 234555555554443
No 42
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.31 E-value=2.7e-06 Score=72.77 Aligned_cols=130 Identities=11% Similarity=0.087 Sum_probs=84.2
Q ss_pred EEEEEeCCCcCCCHHhHHHHHHHHHhCCCceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHH--h-hcCCCeeecc
Q 012063 269 VLFVSFGSGGTLSYDQLEELALGLELSEQQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLD--R-TKEQGLVVPS 345 (471)
Q Consensus 269 ~i~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~-~~~~~v~v~~ 345 (471)
.+++..|+.. ....+..++++++..+.--+..++.... ...+ ..+.+ . -..+++.+.+
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~~----------------~~~l-~~~~~~~~~~l~~~v~~~g 84 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFSK----------------GDHA-ERYARKIMKIAPDNVKFLG 84 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCCT----------------TSTH-HHHHHHHHHHSCTTEEEEE
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCcc----------------HHHH-HHHHHhhhcccCCcEEEeC
Confidence 4556678764 2344677888888774323333444322 0111 11111 1 1245899999
Q ss_pred Ccch---hhhhcCCccccccc---ccCch-hHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCCCCCccCHHH
Q 012063 346 WAPQ---VEVLGHPSTGGFLT---HCGWN-STLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLIKREE 418 (471)
Q Consensus 346 ~~pq---~~~L~~~~~~~~It---HgG~~-s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~ 418 (471)
|+++ ..++..++ ++|. +.|++ +++||+++|+|+|+... ..+...+++ .+.|+.+ . -+.++
T Consensus 85 ~~~~~e~~~~~~~ad--i~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~-~~~g~~~-~-----~d~~~ 151 (177)
T 2f9f_A 85 SVSEEELIDLYSRCK--GLLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVIN-EKTGYLV-N-----ADVNE 151 (177)
T ss_dssp SCCHHHHHHHHHHCS--EEEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCB-TTTEEEE-C-----SCHHH
T ss_pred CCCHHHHHHHHHhCC--EEEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcC-CCccEEe-C-----CCHHH
Confidence 9997 67788888 5554 34444 89999999999999754 445555555 5678777 3 46999
Q ss_pred HHHHHHHHhCCC
Q 012063 419 IAKVIKGLMHGE 430 (471)
Q Consensus 419 l~~~i~~~l~~~ 430 (471)
+.++|.+++++.
T Consensus 152 l~~~i~~l~~~~ 163 (177)
T 2f9f_A 152 IIDAMKKVSKNP 163 (177)
T ss_dssp HHHHHHHHHHCT
T ss_pred HHHHHHHHHhCH
Confidence 999999999874
No 43
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.21 E-value=1.9e-05 Score=83.12 Aligned_cols=77 Identities=14% Similarity=0.115 Sum_probs=52.1
Q ss_pred CCeeeccC----cchhhhhc----CCcccccccc----cCchhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeec
Q 012063 339 QGLVVPSW----APQVEVLG----HPSTGGFLTH----CGWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRP 406 (471)
Q Consensus 339 ~~v~v~~~----~pq~~~L~----~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~ 406 (471)
++|.+.++ +|+.++.. .++ +||.- |--.++.||+++|+|+|+.. .......+.+ -+.|+.+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaD--vfV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV~d-g~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVH-GKSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTC--EEEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHCCB-TTTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCe--EEEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHHcc-CCcEEEe
Confidence 57777774 44455544 345 56632 33468999999999999963 3444455555 5678888
Q ss_pred CCCCCCccCHHHHHHHHHHHh
Q 012063 407 PEYENGLIKREEIAKVIKGLM 427 (471)
Q Consensus 407 ~~~~~~~~~~~~l~~~i~~~l 427 (471)
+.. +.++++++|.+++
T Consensus 713 ~p~-----D~e~LA~aI~~lL 728 (816)
T 3s28_A 713 DPY-----HGDQAADTLADFF 728 (816)
T ss_dssp CTT-----SHHHHHHHHHHHH
T ss_pred CCC-----CHHHHHHHHHHHH
Confidence 764 5899999997776
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.20 E-value=0.00048 Score=67.07 Aligned_cols=108 Identities=10% Similarity=0.055 Sum_probs=65.0
Q ss_pred eeeccCcchh---hhhcCCccccccc----ccCchhHHHHHhhCCceeeccccccchhhHHHHHhhhcc-----------
Q 012063 341 LVVPSWAPQV---EVLGHPSTGGFLT----HCGWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNV----------- 402 (471)
Q Consensus 341 v~v~~~~pq~---~~L~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~----------- 402 (471)
+.+.+|+|+. +++..++ ++|. -|.-.++.||+++|+|+|+.... .....+.+ |.
T Consensus 256 v~~~g~~~~~~~~~~~~~ad--v~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~--~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACD--VIVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSG--DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCS--EEEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCT--TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCC--EEEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHcc--Ccccccccccccc
Confidence 6677999854 4566778 5553 23345899999999999996543 23333333 22
Q ss_pred -----ee--ecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHH
Q 012063 403 -----AL--RPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVHKWK 468 (471)
Q Consensus 403 -----g~--~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 468 (471)
|+ .+.. -+.+++.++| +++++ ++.+++..+ ..++.+.+.-+-+..++++.+-+.
T Consensus 328 ~~~~~G~~gl~~~-----~d~~~la~~i-~l~~~---~~~~~~~~~---~a~~~~~~~fs~~~~~~~~~~~~~ 388 (413)
T 3oy2_A 328 VDDRDGIGGIEGI-----IDVDDLVEAF-TFFKD---EKNRKEYGK---RVQDFVKTKPTWDDISSDIIDFFN 388 (413)
T ss_dssp CTTTCSSCCEEEE-----CCHHHHHHHH-HHTTS---HHHHHHHHH---HHHHHHTTSCCHHHHHHHHHHHHH
T ss_pred cccccCcceeeCC-----CCHHHHHHHH-HHhcC---HHHHHHHHH---HHHHHHHHhCCHHHHHHHHHHHHH
Confidence 44 4443 3699999999 99988 555433332 222222234465665555554443
No 45
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.10 E-value=0.0013 Score=63.11 Aligned_cols=96 Identities=13% Similarity=0.164 Sum_probs=68.2
Q ss_pred CeeeccCcch-hhhhcCCccccccc---c--cCchhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCCCCCc
Q 012063 340 GLVVPSWAPQ-VEVLGHPSTGGFLT---H--CGWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGL 413 (471)
Q Consensus 340 ~v~v~~~~pq-~~~L~~~~~~~~It---H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~ 413 (471)
++.+.++..+ ..+++.++ +++. . +|-.+++||+++|+|+|+-|..++.+.....+.+ .|.++...
T Consensus 261 ~v~~~~~~~dl~~~y~~aD--v~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~-~G~l~~~~------ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGK--IAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEK-EGAGFEVK------ 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEE--EEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHH-TTCEEECC------
T ss_pred cEEEECCHHHHHHHHHhCC--EEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHH-CCCEEEeC------
Confidence 4555554433 56777777 6443 1 2347899999999999987777777766666666 68777652
Q ss_pred cCHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 012063 414 IKREEIAKVIKGLMHGEDGVIIRDRMNRLKDA 445 (471)
Q Consensus 414 ~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~ 445 (471)
+.+++.++|.++++|+....|.+++++..+.
T Consensus 332 -d~~~La~ai~~ll~d~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 332 -NETELVTKLTELLSVKKEIKVEEKSREIKGC 362 (374)
T ss_dssp -SHHHHHHHHHHHHHSCCCCCHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 5899999999999872256777777776654
No 46
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=97.89 E-value=0.0021 Score=62.46 Aligned_cols=73 Identities=8% Similarity=-0.022 Sum_probs=55.0
Q ss_pred CeeeccCcchh---hhhcCCccccccc---ccCc-hhHHHHH-------hhCCceeeccccccchhhHHHHHhhhcceee
Q 012063 340 GLVVPSWAPQV---EVLGHPSTGGFLT---HCGW-NSTLESI-------VHGVPLIAWPLYAEQRLNAVILSEDLNVALR 405 (471)
Q Consensus 340 ~v~v~~~~pq~---~~L~~~~~~~~It---HgG~-~s~~eal-------~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~ 405 (471)
+|.+.+++|+. +++..++ ++|. +-|+ +++.||+ ++|+|+|+... +.+ -..|..
T Consensus 266 ~V~f~G~~~~~~l~~~~~~ad--v~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~-~~~G~l 332 (406)
T 2hy7_A 266 NVIVYGEMKHAQTIGYIKHAR--FGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVG-PYKSRF 332 (406)
T ss_dssp TEEEECCCCHHHHHHHHHTCS--EEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTC-SCSSEE
T ss_pred CEEEcCCCCHHHHHHHHHhcC--EEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------ccc-CcceEE
Confidence 89999999865 4577788 5543 3344 5688999 99999999754 444 455776
Q ss_pred -cCCCCCCccCHHHHHHHHHHHhCCC
Q 012063 406 -PPEYENGLIKREEIAKVIKGLMHGE 430 (471)
Q Consensus 406 -~~~~~~~~~~~~~l~~~i~~~l~~~ 430 (471)
+... +.++++++|.++++++
T Consensus 333 ~v~~~-----d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 333 GYTPG-----NADSVIAAITQALEAP 353 (406)
T ss_dssp EECTT-----CHHHHHHHHHHHHHCC
T ss_pred EeCCC-----CHHHHHHHHHHHHhCc
Confidence 6654 5899999999999874
No 47
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.56 E-value=0.00042 Score=57.94 Aligned_cols=126 Identities=11% Similarity=0.050 Sum_probs=73.4
Q ss_pred cEEEEEeCCCcCCCHHhHHHHHHHHHhCCC--ceE-EEEecCCCCCCCCccccCCCCCCCCCCCChhhHHhhc--CCCee
Q 012063 268 SVLFVSFGSGGTLSYDQLEELALGLELSEQ--QFL-WVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTK--EQGLV 342 (471)
Q Consensus 268 ~~i~vs~GS~~~~~~~~~~~~~~al~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~v~ 342 (471)
+++++..|+... ...+..++++++.... .+- +.++.+. ..+.+.+... +-++.
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--------------------~~~~~~~~~~~~~~~v~ 59 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGP--------------------DEKKIKLLAQKLGVKAE 59 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCST--------------------THHHHHHHHHHHTCEEE
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCc--------------------cHHHHHHHHHHcCCeEE
Confidence 467788888743 3345667777766532 332 3333321 1122322221 22777
Q ss_pred eccCcchh---hhhcCCccccccc----ccCchhHHHHHhhCC-ceeeccccccchhhHHHHHhhhcceeecCCCCCCcc
Q 012063 343 VPSWAPQV---EVLGHPSTGGFLT----HCGWNSTLESIVHGV-PLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLI 414 (471)
Q Consensus 343 v~~~~pq~---~~L~~~~~~~~It----HgG~~s~~eal~~Gv-P~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~ 414 (471)
+ +|+|+. .++..++ ++|. -|.-.++.||+++|+ |+|+....+ .....+.+ .+. .+.. -
T Consensus 60 ~-g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~-~~~--~~~~-----~ 125 (166)
T 3qhp_A 60 F-GFVNSNELLEILKTCT--LYVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALD-ERS--LFEP-----N 125 (166)
T ss_dssp C-CCCCHHHHHHHHTTCS--EEEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSS-GGG--EECT-----T
T ss_pred E-eecCHHHHHHHHHhCC--EEEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccC-Cce--EEcC-----C
Confidence 8 999864 5677788 5664 233459999999996 999933211 11112222 222 3333 3
Q ss_pred CHHHHHHHHHHHhCC
Q 012063 415 KREEIAKVIKGLMHG 429 (471)
Q Consensus 415 ~~~~l~~~i~~~l~~ 429 (471)
+.+++.++|.+++++
T Consensus 126 ~~~~l~~~i~~l~~~ 140 (166)
T 3qhp_A 126 NAKDLSAKIDWWLEN 140 (166)
T ss_dssp CHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhC
Confidence 699999999999987
No 48
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.47 E-value=0.00086 Score=67.52 Aligned_cols=177 Identities=8% Similarity=0.018 Sum_probs=101.9
Q ss_pred cEEEEEeCCCcCCCHHhHHHHHHHHHhCCCceEEEEe-cCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccC
Q 012063 268 SVLFVSFGSGGTLSYDQLEELALGLELSEQQFLWVVK-SPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSW 346 (471)
Q Consensus 268 ~~i~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ 346 (471)
.++|.+|++..-..++.+....+-+++.+..++|... +... .....+-..+.+.--++.+++.+.
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~--------------g~~~~~~~~~~~~GI~~Rv~F~g~ 506 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN--------------GITHPYVERFIKSYLGDSATAHPH 506 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC--------------GGGHHHHHHHHHHHHGGGEEEECC
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc--------------hhhHHHHHHHHHcCCCccEEEcCC
Confidence 5899999998777888888888888888888887542 2111 000011111111111246778888
Q ss_pred cchhhhh---cCCcccccc---cccCchhHHHHHhhCCceeeccccccc-hhhHHHHHhhhcceee-cCCCCCCccCHHH
Q 012063 347 APQVEVL---GHPSTGGFL---THCGWNSTLESIVHGVPLIAWPLYAEQ-RLNAVILSEDLNVALR-PPEYENGLIKREE 418 (471)
Q Consensus 347 ~pq~~~L---~~~~~~~~I---tHgG~~s~~eal~~GvP~l~~P~~~DQ-~~na~~~~~~~G~g~~-~~~~~~~~~~~~~ 418 (471)
+|+.+.+ ..++ +|+ ..+|..|++||+++|||+|+.+-..=. ..-+..+.. .|+.-. +. -+.++
T Consensus 507 ~p~~e~la~y~~aD--IfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA------~d~ee 577 (631)
T 3q3e_A 507 SPYHQYLRILHNCD--MMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA------NTVDE 577 (631)
T ss_dssp CCHHHHHHHHHTCS--EEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE------SSHHH
T ss_pred CCHHHHHHHHhcCc--EEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec------CCHHH
Confidence 8876544 6676 443 337789999999999999998743211 111233444 565432 22 35677
Q ss_pred HHHHHHHHhCCCchHHHHHHHHH-HHHHHHH--Hhhc-CCCHHHHHHHHHHHHHhc
Q 012063 419 IAKVIKGLMHGEDGVIIRDRMNR-LKDAAAA--AVSD-GGSSTKTLSQLVHKWKNQ 470 (471)
Q Consensus 419 l~~~i~~~l~~~~~~~~r~~a~~-l~~~~~~--~~~~-~g~~~~~~~~~~~~~~~~ 470 (471)
..+...++.+| ++.+++.++ +++.... ..+. ...-++.+++++++|.+.
T Consensus 578 Yv~~Av~La~D---~~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~~~w~~~ 630 (631)
T 3q3e_A 578 YVERAVRLAEN---HQERLELRRYIIENNGLNTLFTGDPRPMGQVFLEKLNAFLKE 630 (631)
T ss_dssp HHHHHHHHHHC---HHHHHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCC---HHHHHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHhc
Confidence 76666678888 554433322 2221111 1111 122356777888877654
No 49
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.40 E-value=0.0022 Score=55.29 Aligned_cols=77 Identities=16% Similarity=0.054 Sum_probs=57.7
Q ss_pred Ceee-ccCcch---hhhhcCCccccccccc---C-chhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCCCC
Q 012063 340 GLVV-PSWAPQ---VEVLGHPSTGGFLTHC---G-WNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYEN 411 (471)
Q Consensus 340 ~v~v-~~~~pq---~~~L~~~~~~~~ItHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~ 411 (471)
++.+ .+|+++ ..++..++ ++|.-. | -.++.||+++|+|+|+.... .....+ . .+.|..+...
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad--~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~-~~~g~~~~~~-- 165 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVD--FVIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-T-NETGILVKAG-- 165 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCS--EEEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-C-TTTCEEECTT--
T ss_pred CEEEEeccCCHHHHHHHHHHCC--EEEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-C-CCceEEecCC--
Confidence 8888 999985 46677888 565322 3 46789999999999987543 344445 5 5778777654
Q ss_pred CccCHHHHHHHHHHHhC-C
Q 012063 412 GLIKREEIAKVIKGLMH-G 429 (471)
Q Consensus 412 ~~~~~~~l~~~i~~~l~-~ 429 (471)
+.+++.++|.++++ +
T Consensus 166 ---~~~~l~~~i~~l~~~~ 181 (200)
T 2bfw_A 166 ---DPGELANAILKALELS 181 (200)
T ss_dssp ---CHHHHHHHHHHHHHCC
T ss_pred ---CHHHHHHHHHHHHhcC
Confidence 59999999999998 8
No 50
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.11 E-value=0.00098 Score=62.91 Aligned_cols=110 Identities=12% Similarity=0.114 Sum_probs=78.2
Q ss_pred CeeeccCcchhhhh---cCCcccccccccCc---------hhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecC
Q 012063 340 GLVVPSWAPQVEVL---GHPSTGGFLTHCGW---------NSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPP 407 (471)
Q Consensus 340 ~v~v~~~~pq~~~L---~~~~~~~~ItHgG~---------~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~ 407 (471)
||...+|+|+.++. ..++.+++.+-+.+ +-+.|++++|+|+|+.+ ...++..+++ .|+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~-~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIEN-NGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHH-HTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHh-CCeEEEeC
Confidence 89999999987764 44565555533333 34789999999999855 4567778888 89999885
Q ss_pred CCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Q 012063 408 EYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVHK 466 (471)
Q Consensus 408 ~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 466 (471)
+.+++.+++..+. .++..+|++++++.++.++. |--..+.+.+.+.+
T Consensus 290 -------~~~e~~~~i~~l~-~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVN-EDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQ 336 (339)
T ss_dssp -------SHHHHHHHHHHCC-HHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHH
Confidence 3688889998764 33456788899888888774 44445555544443
No 51
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=96.99 E-value=0.0093 Score=62.36 Aligned_cols=138 Identities=15% Similarity=0.189 Sum_probs=90.5
Q ss_pred CccEEEEEeCCCcCCCHHhHHHHHHHHHhCCCceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHH-hhcCCCeeec
Q 012063 266 SGSVLFVSFGSGGTLSYDQLEELALGLELSEQQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLD-RTKEQGLVVP 344 (471)
Q Consensus 266 ~~~~i~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~~~~v~v~ 344 (471)
+..++|.+|-+..-..++.+..-.+-|++.+.-++|....... ....+-..+.+ .+....+++.
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~---------------~~~~l~~~~~~~gi~~~r~~f~ 585 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV---------------GEPNIQQYAQNMGLPQNRIIFS 585 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG---------------GHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH---------------HHHHHHHHHHhcCCCcCeEEEC
Confidence 4569999999988889999999999999999999999876422 00001111111 1234467787
Q ss_pred cCcchhhhh---cCCccccccc---ccCchhHHHHHhhCCceeeccccccch---hhHHHHHhhhcceeecCCCCCCccC
Q 012063 345 SWAPQVEVL---GHPSTGGFLT---HCGWNSTLESIVHGVPLIAWPLYAEQR---LNAVILSEDLNVALRPPEYENGLIK 415 (471)
Q Consensus 345 ~~~pq~~~L---~~~~~~~~It---HgG~~s~~eal~~GvP~l~~P~~~DQ~---~na~~~~~~~G~g~~~~~~~~~~~~ 415 (471)
+..|..+-| ..++ +++- .+|.+|++|||+.|||+|.+| ++++ .-+..+.. .|+.-.+-.. .
T Consensus 586 ~~~~~~~~l~~~~~~D--i~LDt~p~~g~tT~~eal~~GvPvvt~~--g~~~~sR~~~s~l~~-~gl~e~ia~~-----~ 655 (723)
T 4gyw_A 586 PVAPKEEHVRRGQLAD--VCLDTPLCNGHTTGMDVLWAGTPMVTMP--GETLASRVAASQLTC-LGCLELIAKN-----R 655 (723)
T ss_dssp ECCCHHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCC--CSSGGGTHHHHHHHH-HTCGGGBCSS-----H
T ss_pred CCCCHHHHHHHhCCCe--EEeCCCCcCCHHHHHHHHHcCCCEEEcc--CCCccHhHHHHHHHH-cCCcccccCC-----H
Confidence 888765544 4455 6654 788899999999999999998 4432 22344555 6766544322 2
Q ss_pred HHHHHHHHHHHhCC
Q 012063 416 REEIAKVIKGLMHG 429 (471)
Q Consensus 416 ~~~l~~~i~~~l~~ 429 (471)
.|=+..+| ++-+|
T Consensus 656 ~~Y~~~a~-~la~d 668 (723)
T 4gyw_A 656 QEYEDIAV-KLGTD 668 (723)
T ss_dssp HHHHHHHH-HHHHC
T ss_pred HHHHHHHH-HHhcC
Confidence 44555555 45556
No 52
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.84 E-value=0.2 Score=47.29 Aligned_cols=108 Identities=10% Similarity=0.095 Sum_probs=66.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCC-CcEEEEEeCCCCCCchhhhhhhccCCCCeE-EEEcCCCCCCcchhHHHH
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRH-DISVTFLVPTIGPPSKAITSVLQGLPEHIN-HVLLPPVNFEEDVKAEIQ 81 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lp~~~~~~~~~~~~~ 81 (471)
..++|+++-....|++.=..++.+.|.++. +.+|++++.+ ....+....| .++ ++.++... . ...
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~------~~~~l~~~~p-~vd~vi~~~~~~----~--~~~ 73 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDE------KLQQVMEYNP-NIDELIVVDKKG----R--HNS 73 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEG------GGGGGTSSCT-TCSEEEEECCSS----H--HHH
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECc------chhHHHhcCC-CccEEEEeCccc----c--ccc
Confidence 457999999999999999999999996654 7999999977 3444444444 353 55553311 0 011
Q ss_pred HHHHHHHhHHHHHHHHHHhhcCCCc-cEEEeCCCCccHHHHHHHhCCceEEEe
Q 012063 82 IVLAIKRSLSSVRDVFKSLVASTHL-MALVVDPFGTDVFDVAREFYVPSYLYF 133 (471)
Q Consensus 82 ~~~~~~~~~~~l~~~l~~~~~~~~~-D~VI~D~~~~~~~~~A~~lgIP~v~~~ 133 (471)
+. .+.++++.+ ++.++ |++|.=....-...++...|+|..+.+
T Consensus 74 ~~--------~~~~l~~~L-r~~~y~D~vidl~~~~rs~~l~~~~~a~~riG~ 117 (349)
T 3tov_A 74 IS--------GLNEVAREI-NAKGKTDIVINLHPNERTSYLAWKIHAPITTGM 117 (349)
T ss_dssp HH--------HHHHHHHHH-HHHCCCCEEEECCCSHHHHHHHHHHCCSEEEEC
T ss_pred HH--------HHHHHHHHH-hhCCCCeEEEECCCChHHHHHHHHhCCCeEEec
Confidence 11 111222222 23389 999853333444567888899966543
No 53
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=96.65 E-value=0.014 Score=57.91 Aligned_cols=109 Identities=9% Similarity=-0.064 Sum_probs=68.7
Q ss_pred CCee-eccCcch--hhhhcCCcccccccc----cCchhHHHHHhhCCceeeccccccchhhHHHHHhhh---------cc
Q 012063 339 QGLV-VPSWAPQ--VEVLGHPSTGGFLTH----CGWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDL---------NV 402 (471)
Q Consensus 339 ~~v~-v~~~~pq--~~~L~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~---------G~ 402 (471)
.++. +.++..+ ..++..++ +||.- |--++++||+++|+|+|+.... .+...+.+ - +.
T Consensus 347 ~~v~~~~g~~~~~~~~~~~~ad--v~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e~v~~-~~~~~~~~~~~~ 419 (485)
T 2qzs_A 347 GQVGVQIGYHEAFSHRIMGGAD--VILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLADTVSD-CSLENLADGVAS 419 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCB-CCHHHHHTTCCC
T ss_pred CcEEEeCCCCHHHHHHHHHhCC--EEEECCccCCCcHHHHHHHHCCCCEEECCCC----Cccceecc-Cccccccccccc
Confidence 5775 6777433 36788888 56632 3345788999999999997543 33334444 3 57
Q ss_pred eeecCCCCCCccCHHHHHHHHHHHh---CCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHH
Q 012063 403 ALRPPEYENGLIKREEIAKVIKGLM---HGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVHKWK 468 (471)
Q Consensus 403 g~~~~~~~~~~~~~~~l~~~i~~~l---~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 468 (471)
|+.+... +.++++++|.+++ .| ++.+++.. +..++ +.-+-+..++++++-+.
T Consensus 420 G~l~~~~-----d~~~la~~i~~ll~~~~~---~~~~~~~~---~~~~~---~~fs~~~~~~~~~~ly~ 474 (485)
T 2qzs_A 420 GFVFEDS-----NAWSLLRAIRRAFVLWSR---PSLWRFVQ---RQAMA---MDFSWQVAAKSYRELYY 474 (485)
T ss_dssp BEEECSS-----SHHHHHHHHHHHHHHHTS---HHHHHHHH---HHHHH---CCCCHHHHHHHHHHHHH
T ss_pred eEEECCC-----CHHHHHHHHHHHHHHcCC---HHHHHHHH---HHHHh---hcCCHHHHHHHHHHHHH
Confidence 8877754 5899999999999 56 44443332 22222 35566666666555443
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.02 E-value=1 Score=42.12 Aligned_cols=106 Identities=13% Similarity=0.143 Sum_probs=62.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCC-CcEEEEEeCCCCCCchhhhhhhccCCCCe-EEEEcCCCCCCcchhHHHHHH
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRH-DISVTFLVPTIGPPSKAITSVLQGLPEHI-NHVLLPPVNFEEDVKAEIQIV 83 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lp~~~~~~~~~~~~~~~ 83 (471)
|+|+++.....|++.=...+.++|.++. +.+|++++.+ ....+....+ .+ +++.++.... ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~------~~~~l~~~~p-~i~~v~~~~~~~~------~~--- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPA------WCRPLLSRMP-EVNEAIPMPLGHG------AL--- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECG------GGHHHHTTCT-TEEEEEEC----------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECc------chhHHHhcCC-ccCEEEEecCCcc------cc---
Confidence 5899999888899988888999996533 7999999976 3334444444 34 4444421100 00
Q ss_pred HHHHHhHHHHHHHHHHhhcCCCccEEEeCCCCccHHHHHHHhCCceEEEe
Q 012063 84 LAIKRSLSSVRDVFKSLVASTHLMALVVDPFGTDVFDVAREFYVPSYLYF 133 (471)
Q Consensus 84 ~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~ 133 (471)
......++.+. +++.+||++|.=....-...++...|+|..+.+
T Consensus 65 -----~~~~~~~l~~~-l~~~~~D~vid~~~~~~sa~~~~~~~~~~~ig~ 108 (348)
T 1psw_A 65 -----EIGERRKLGHS-LREKRYDRAYVLPNSFKSALVPLFAGIPHRTGW 108 (348)
T ss_dssp -----CHHHHHHHHHH-TTTTTCSEEEECSCCSGGGHHHHHTTCSEEEEE
T ss_pred -----chHHHHHHHHH-HHhcCCCEEEECCCChHHHHHHHHhCCCEEecc
Confidence 11122233333 355689999821222334467778899964433
No 55
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=93.98 E-value=0.13 Score=49.83 Aligned_cols=83 Identities=18% Similarity=0.061 Sum_probs=54.5
Q ss_pred CeeeccCcchh---hhhcCCccccccc--c-cCc-hhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCCCCC
Q 012063 340 GLVVPSWAPQV---EVLGHPSTGGFLT--H-CGW-NSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENG 412 (471)
Q Consensus 340 ~v~v~~~~pq~---~~L~~~~~~~~It--H-gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~ 412 (471)
++.+.+++|+. ++++.++ +||. . =|. .+++||+++|+|+|+ -..+ ....+++ -..|+.+...
T Consensus 296 ~v~f~G~~~~~~l~~~~~~ad--v~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~-~~~G~lv~~~--- 364 (413)
T 2x0d_A 296 HLNSLGKLTLEDYADLLKRSS--IGISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNW-HSNIVSLEQL--- 364 (413)
T ss_dssp EEEEEESCCHHHHHHHHHHCC--EEECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGT-BTTEEEESSC---
T ss_pred cEEEcCCCCHHHHHHHHHhCC--EEEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhc-CCCEEEeCCC---
Confidence 78888999865 4566688 5553 2 133 467999999999998 3222 1222333 3467777664
Q ss_pred ccCHHHHHHHHHHHhCCCchHHHHHH
Q 012063 413 LIKREEIAKVIKGLMHGEDGVIIRDR 438 (471)
Q Consensus 413 ~~~~~~l~~~i~~~l~~~~~~~~r~~ 438 (471)
++++++++|.++++| ++.+++
T Consensus 365 --d~~~la~ai~~ll~~---~~~~~~ 385 (413)
T 2x0d_A 365 --NPENIAETLVELCMS---FNNRDV 385 (413)
T ss_dssp --SHHHHHHHHHHHHHH---TC----
T ss_pred --CHHHHHHHHHHHHcC---HHHHHH
Confidence 599999999999987 444444
No 56
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=87.89 E-value=2.5 Score=42.29 Aligned_cols=84 Identities=7% Similarity=-0.053 Sum_probs=49.8
Q ss_pred CCCeeeccCcchh---hhhcCCcccccccc---cCc-hhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCCC
Q 012063 338 EQGLVVPSWAPQV---EVLGHPSTGGFLTH---CGW-NSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYE 410 (471)
Q Consensus 338 ~~~v~v~~~~pq~---~~L~~~~~~~~ItH---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~ 410 (471)
+.++.+..+.++. .+++.++ +||.- =|+ .+++||+++|+|.|+-...+ ....+.+ -.-|.......
T Consensus 381 ~~~v~~~~~~~~~~~~~~~~~aD--~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG----~~e~V~d-g~~G~~~~~~~ 453 (536)
T 3vue_A 381 PGKVRAVVKFNAPLAHLIMAGAD--VLAVPSRFEPCGLIQLQGMRYGTPCACASTGG----LVDTVIE-GKTGFHMGRLS 453 (536)
T ss_dssp TTTEEEECSCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHTTCCEEECSCTH----HHHHCCB-TTTEEECCCCC
T ss_pred CCceEEEEeccHHHHHHHHHhhh--eeecccccCCCCHHHHHHHHcCCCEEEcCCCC----chheeeC-CCCccccccCC
Confidence 3466666666653 4567777 66642 233 48899999999999975432 3333433 33344332211
Q ss_pred -CC----ccCHHHHHHHHHHHhC
Q 012063 411 -NG----LIKREEIAKVIKGLMH 428 (471)
Q Consensus 411 -~~----~~~~~~l~~~i~~~l~ 428 (471)
++ ..+.+++.++|++++.
T Consensus 454 ~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 454 VDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp SCTTCCCHHHHHHHHHHHHHHHH
T ss_pred CceeEECCCCHHHHHHHHHHHHH
Confidence 01 1347889999988775
No 57
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=86.81 E-value=0.38 Score=44.72 Aligned_cols=39 Identities=13% Similarity=0.164 Sum_probs=33.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCC-CcEEEEEeCCC
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRH-DISVTFLVPTI 44 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~-Gh~Vt~~~~~~ 44 (471)
|+|+++-..+.|++.=..++.++|.++. +.++++++.+.
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~ 40 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEG 40 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGG
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehh
Confidence 5899999999999998999999996654 79999999773
No 58
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=85.06 E-value=4.2 Score=35.99 Aligned_cols=41 Identities=20% Similarity=0.064 Sum_probs=29.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCC
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPP 47 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~ 47 (471)
++|||++.--=+. |---+.+|+++| ++ +|+|++++|.....
T Consensus 10 ~~m~ILlTNDDGi-~apGi~aL~~~l-~~-~~~V~VVAP~~~~S 50 (261)
T 3ty2_A 10 PKLRLLLSNDDGV-YAKGLAILAKTL-AD-LGEVDVVAPDRNRS 50 (261)
T ss_dssp -CCEEEEECSSCT-TCHHHHHHHHHH-TT-TSEEEEEEESSCCT
T ss_pred CCCeEEEEcCCCC-CCHHHHHHHHHH-Hh-cCCEEEEecCCCCc
Confidence 5699988875332 334467888888 55 89999999876554
No 59
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=82.49 E-value=0.89 Score=45.55 Aligned_cols=38 Identities=18% Similarity=0.292 Sum_probs=28.9
Q ss_pred CCcEEEEEcC---C-----CccCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012063 4 VKHHVACMPS---P-----GMGHLIPHVELAKQLVLRHDISVTFLVPTI 44 (471)
Q Consensus 4 ~~~~i~~~~~---p-----~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~ 44 (471)
.+|||+++++ | +.|+ -.-+|+++|+++ ||+|++++|..
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLad--vv~~L~~aL~~~-G~~V~Vi~P~Y 53 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGD--VLGGLPPAMAAN-GHRVMVISPRY 53 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHH--HHHHHHHHHHTT-TCEEEEEEECC
T ss_pred CCcEEEEEEEeccchhccCcHHH--HHHHHHHHHHHc-CCeEEEEecCc
Confidence 5899999974 3 2333 356899999775 99999999754
No 60
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=82.32 E-value=8.6 Score=32.30 Aligned_cols=81 Identities=11% Similarity=0.091 Sum_probs=51.0
Q ss_pred EEEE-cCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCCcchhHHHHHHHHH
Q 012063 8 VACM-PSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFEEDVKAEIQIVLAI 86 (471)
Q Consensus 8 i~~~-~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~ 86 (471)
|+++ +-++.|=.+=...||..|+++ |++|.++-..... ....+....+.++.+++.+.
T Consensus 4 i~v~s~kgG~GKTt~a~~la~~la~~-g~~vlliD~D~~~---~~~~~~~~~~~~~~~~~~~~----------------- 62 (206)
T 4dzz_A 4 ISFLNPKGGSGKTTAVINIATALSRS-GYNIAVVDTDPQM---SLTNWSKAGKAAFDVFTAAS----------------- 62 (206)
T ss_dssp EEECCSSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCTTC---HHHHHHTTSCCSSEEEECCS-----------------
T ss_pred EEEEeCCCCccHHHHHHHHHHHHHHC-CCeEEEEECCCCC---CHHHHHhcCCCCCcEEecCc-----------------
Confidence 3344 347889999999999999875 9999999865333 23333333334555554321
Q ss_pred HHhHHHHHHHHHHhhcCCCccEEEeCCCC
Q 012063 87 KRSLSSVRDVFKSLVASTHLMALVVDPFG 115 (471)
Q Consensus 87 ~~~~~~l~~~l~~~~~~~~~D~VI~D~~~ 115 (471)
..+.+.++.+ ..++|+||.|.-.
T Consensus 63 ----~~l~~~l~~l--~~~yD~viiD~~~ 85 (206)
T 4dzz_A 63 ----EKDVYGIRKD--LADYDFAIVDGAG 85 (206)
T ss_dssp ----HHHHHTHHHH--TTTSSEEEEECCS
T ss_pred ----HHHHHHHHHh--cCCCCEEEEECCC
Confidence 2333444443 2369999999743
No 61
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=80.78 E-value=9.1 Score=37.54 Aligned_cols=109 Identities=15% Similarity=0.075 Sum_probs=68.4
Q ss_pred ee-eccCcchhh---hhcCCccccccc---ccCch-hHHHHHhhCC-----ceeeccccccchhhHHHHHhhhcceeecC
Q 012063 341 LV-VPSWAPQVE---VLGHPSTGGFLT---HCGWN-STLESIVHGV-----PLIAWPLYAEQRLNAVILSEDLNVALRPP 407 (471)
Q Consensus 341 v~-v~~~~pq~~---~L~~~~~~~~It---HgG~~-s~~eal~~Gv-----P~l~~P~~~DQ~~na~~~~~~~G~g~~~~ 407 (471)
++ +.+++++.+ ++..++ +||. .=|+| +..||+++|+ |+|+--+.+--.. ..-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~AD--v~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~--------l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSD--VGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE--------LTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCS--EEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT--------CTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHcc--EEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH--------hCCeEEEC
Confidence 44 457788764 455677 5553 34665 7899999998 6666544331111 12356666
Q ss_pred CCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhc
Q 012063 408 EYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVHKWKNQ 470 (471)
Q Consensus 408 ~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 470 (471)
+. +.++++++|.++|+++. +..+++.++.++.+++ -+.+...+++++.+.+.
T Consensus 403 p~-----d~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 PY-----DRDEVAAALDRALTMSL-AERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp TT-----CHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred CC-----CHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 54 58999999999998532 2234444555555543 46777888888877653
No 62
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=79.60 E-value=18 Score=30.43 Aligned_cols=102 Identities=15% Similarity=0.116 Sum_probs=59.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCC-CCchhhhhhhccCCCCeEEEEcCCCCCCcchhHHHHHH
Q 012063 5 KHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIG-PPSKAITSVLQGLPEHINHVLLPPVNFEEDVKAEIQIV 83 (471)
Q Consensus 5 ~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~ 83 (471)
+-.|.+++.++.|-.+-.+.+|.+.+.+ |++|.++..-.. ... .-......+ ++.++...............
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~-G~rV~~vQF~Kg~~~~-gE~~~l~~L--~v~~~~~g~gf~~~~~~~~~--- 100 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGH-GKNVGVVQFIKGTWPN-GERNLLEPH--GVEFQVMATGFTWETQNREA--- 100 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHT-TCCEEEEESSCCSSCC-HHHHHHGGG--TCEEEECCTTCCCCGGGHHH---
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHC-CCeEEEEEeeCCCCCc-cHHHHHHhC--CcEEEEcccccccCCCCcHH---
Confidence 5688999999999999999999999875 999999964322 110 111222333 27777665421111111111
Q ss_pred HHHHHhHHHHHHHHHHhhcCCCccEEEeCCCC
Q 012063 84 LAIKRSLSSVRDVFKSLVASTHLMALVVDPFG 115 (471)
Q Consensus 84 ~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~ 115 (471)
........+.. +.+.+.+.++|+||.|-+.
T Consensus 101 -~~~~a~~~l~~-a~~~l~~~~yDlvILDEi~ 130 (196)
T 1g5t_A 101 -DTAACMAVWQH-GKRMLADPLLDMVVLDELT 130 (196)
T ss_dssp -HHHHHHHHHHH-HHHHTTCTTCSEEEEETHH
T ss_pred -HHHHHHHHHHH-HHHHHhcCCCCEEEEeCCC
Confidence 11111222222 2233455689999999853
No 63
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=79.44 E-value=9.2 Score=36.71 Aligned_cols=98 Identities=17% Similarity=0.165 Sum_probs=52.2
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCCcchhHHH
Q 012063 1 MAQVKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFEEDVKAEI 80 (471)
Q Consensus 1 m~~~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~ 80 (471)
|.+++.+|+++...-. . | .+.++..+ .|++|+++.+...... .....--.++.++.... . .
T Consensus 1 M~~~~k~l~Il~~~~~--~-~--~i~~aa~~-lG~~vv~v~~~~~~~~-------~~~~~~d~~~~~~~~~d---~---~ 61 (425)
T 3vot_A 1 MTKRNKNLAIICQNKH--L-P--FIFEEAER-LGLKVTFFYNSAEDFP-------GNLPAVERCVPLPLFED---E---E 61 (425)
T ss_dssp -CCCCCEEEEECCCTT--C-C--HHHHHHHH-TTCEEEEEEETTSCCC-------CSCTTEEEEEEECTTTC---H---H
T ss_pred CCCCCcEEEEECCChh--H-H--HHHHHHHH-CCCEEEEEECCCcccc-------cCHhhccEEEecCCCCC---H---H
Confidence 8888899999975432 2 2 24566644 5999999875432210 00111113444432211 0 1
Q ss_pred HHHHHHHHhHHHHHHHHHHhhcCCCccEEEe--CCCCccHHHHHHHhCCc
Q 012063 81 QIVLAIKRSLSSVRDVFKSLVASTHLMALVV--DPFGTDVFDVAREFYVP 128 (471)
Q Consensus 81 ~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~--D~~~~~~~~~A~~lgIP 128 (471)
. +.+.+.++.++.++|.|+. |.....+..+++.+|+|
T Consensus 62 ~-----------~~~~~~~~~~~~~id~V~~~~e~~~~~~a~l~e~lglp 100 (425)
T 3vot_A 62 A-----------AMDVVRQTFVEFPFDGVMTLFEPALPFTAKAAEALNLP 100 (425)
T ss_dssp H-----------HHHHHHHHHHHSCCSEEECCCGGGHHHHHHHHHHTTCS
T ss_pred H-----------HHHHHHHhhhhcCCCEEEECCchhHHHHHHHHHHcCCC
Confidence 1 1122233333458999983 55445556788999999
No 64
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=78.62 E-value=11 Score=29.74 Aligned_cols=35 Identities=14% Similarity=0.044 Sum_probs=27.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTI 44 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~ 44 (471)
.+++++..+. =+.|++++++.|.++ |.+|+++ ...
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~~-~~~v~l~-g~R 53 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQEI-GNDVTTL-HVT 53 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHT-TCEEEEE-EEE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHhc-CCcEEEE-EeC
Confidence 4677776443 489999999999875 9999998 543
No 65
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=78.60 E-value=8.1 Score=34.11 Aligned_cols=38 Identities=16% Similarity=0.122 Sum_probs=23.2
Q ss_pred cEEEEEcCCCccCHHH-HHHHHHHHHhCCCcEEEEEeCCCCCC
Q 012063 6 HHVACMPSPGMGHLIP-HVELAKQLVLRHDISVTFLVPTIGPP 47 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P-~l~La~~L~~r~Gh~Vt~~~~~~~~~ 47 (471)
+||++.-= -|--.| +..|+++|.+ .| +|++++|.....
T Consensus 2 p~ILlTND--DGi~apGi~~L~~~l~~-~g-~V~VvAP~~~~S 40 (251)
T 2wqk_A 2 PTFLLVND--DGYFSPGINALREALKS-LG-RVVVVAPDRNLS 40 (251)
T ss_dssp CEEEEECS--SCTTCHHHHHHHHHHTT-TS-EEEEEEESSCCT
T ss_pred CEEEEEcC--CCCCcHHHHHHHHHHHh-CC-CEEEEeeCCCCc
Confidence 45665543 233333 5678888855 47 599998865553
No 66
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=77.62 E-value=6.1 Score=38.83 Aligned_cols=110 Identities=12% Similarity=0.016 Sum_probs=70.8
Q ss_pred CeeeccCcchh---hhhcCCccccccc--ccCchh-HHHHHhhC---CceeeccccccchhhHHHHHhhhc-ceeecCCC
Q 012063 340 GLVVPSWAPQV---EVLGHPSTGGFLT--HCGWNS-TLESIVHG---VPLIAWPLYAEQRLNAVILSEDLN-VALRPPEY 409 (471)
Q Consensus 340 ~v~v~~~~pq~---~~L~~~~~~~~It--HgG~~s-~~eal~~G---vP~l~~P~~~DQ~~na~~~~~~~G-~g~~~~~~ 409 (471)
.|+....+|+. +++..+++ +++| .=|+|. ..|++++| .|.|+--+.+ . .+. +| -|+.+++.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv-~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a---~~~-l~~~allVnP~ 423 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL-LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----A---AEV-LGEYCRSVNPF 423 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE-EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----T---HHH-HGGGSEEECTT
T ss_pred CEEEeCCCCHHHHHHHHHhccE-EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----C---HHH-hCCCEEEECCC
Confidence 46666777764 44555773 2222 468885 48999996 6666554333 1 122 32 46777764
Q ss_pred CCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHh
Q 012063 410 ENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVHKWKN 469 (471)
Q Consensus 410 ~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 469 (471)
+.++++++|.++|+.+. ++-+++.+++.+.+.+ -+...-.+.|++.+..
T Consensus 424 -----D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 424 -----DLVEQAEAISAALAAGP-RQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAA 472 (496)
T ss_dssp -----BHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhh
Confidence 59999999999998532 3455666666666553 4667778888887764
No 67
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=76.59 E-value=25 Score=30.89 Aligned_cols=39 Identities=13% Similarity=0.035 Sum_probs=26.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCC
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPP 47 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~ 47 (471)
|||++.--=+. |---+..|+++|.+ .| +|++++|...+.
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~-~g-~V~VVAP~~~~S 40 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKS-LG-RVVVVAPDRNLS 40 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTT-TS-EEEEEEESSCCT
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHh-cC-CEEEEecCCCcc
Confidence 67777654222 33346788999955 47 999999876553
No 68
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=75.24 E-value=1.8 Score=41.66 Aligned_cols=40 Identities=8% Similarity=0.094 Sum_probs=30.2
Q ss_pred CCcEEEEEcCCCc-----cCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012063 4 VKHHVACMPSPGM-----GHLIPHVELAKQLVLRHDISVTFLVPTI 44 (471)
Q Consensus 4 ~~~~i~~~~~p~~-----GH~~P~l~La~~L~~r~Gh~Vt~~~~~~ 44 (471)
.+|||+++..... |=..-...||++|+++ ||+|+++++..
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~-GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNK-KFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTT-TCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHc-CCceEEEEecC
Confidence 4789988875321 3345689999999765 99999999754
No 69
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=73.20 E-value=14 Score=37.69 Aligned_cols=42 Identities=21% Similarity=0.179 Sum_probs=29.7
Q ss_pred eccCcch---------hhhhcCCcccccccc---cCc-hhHHHHHhhCCceeecccc
Q 012063 343 VPSWAPQ---------VEVLGHPSTGGFLTH---CGW-NSTLESIVHGVPLIAWPLY 386 (471)
Q Consensus 343 v~~~~pq---------~~~L~~~~~~~~ItH---gG~-~s~~eal~~GvP~l~~P~~ 386 (471)
+-.|++. .++++.++ +||.- =|+ .+.+||+++|+|.|+.-..
T Consensus 497 ~P~~L~~~d~lf~~d~~~~~~~ad--vfV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 497 HPEFLNANNPILGLDYDEFVRGCH--LGVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp CCSCCCTTCSSSCCCHHHHHHHCS--EEECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred eccccCCCCccchhHHHHHHhhce--EEEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 3467665 35677888 66643 344 4889999999999996554
No 70
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=72.46 E-value=27 Score=28.82 Aligned_cols=46 Identities=11% Similarity=0.020 Sum_probs=30.3
Q ss_pred eeeccCcch-hhhhcCCcccccccccCchhHHHH---HhhCCceeecccc
Q 012063 341 LVVPSWAPQ-VEVLGHPSTGGFLTHCGWNSTLES---IVHGVPLIAWPLY 386 (471)
Q Consensus 341 v~v~~~~pq-~~~L~~~~~~~~ItHgG~~s~~ea---l~~GvP~l~~P~~ 386 (471)
.+++++.++ ..++..-+...++--||.||+.|+ +.+++|++++|.+
T Consensus 91 ~i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 91 PIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp EEECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred eEEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 344455554 344443343466777999986654 6799999999983
No 71
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=70.97 E-value=8.4 Score=37.32 Aligned_cols=40 Identities=23% Similarity=0.230 Sum_probs=33.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCC
Q 012063 7 HVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPP 47 (471)
Q Consensus 7 ~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~ 47 (471)
-+++..-|+.|-..-.+.+|...+.+ |..|.|++.+-...
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~~-g~~vl~fSlEms~~ 238 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSDN-DDVVNLHSLEMGKK 238 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHT-TCEEEEECSSSCTT
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHc-CCEEEEEECCCCHH
Confidence 35777779999999999999999886 99999998765443
No 72
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=70.67 E-value=30 Score=29.59 Aligned_cols=112 Identities=9% Similarity=0.019 Sum_probs=55.1
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCCcchhHHH
Q 012063 1 MAQVKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFEEDVKAEI 80 (471)
Q Consensus 1 m~~~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~ 80 (471)
|+..++||+++.++.-+. +.+|.++..+..+++|..+.+..... ...+... ..++.+..++...... ..
T Consensus 1 ~~~~~~riavl~SG~Gsn---l~all~~~~~~~~~eI~~Vis~~~~a--~~~~~A~--~~gIp~~~~~~~~~~~----r~ 69 (215)
T 3tqr_A 1 MNREPLPIVVLISGNGTN---LQAIIGAIQKGLAIEIRAVISNRADA--YGLKRAQ--QADIPTHIIPHEEFPS----RT 69 (215)
T ss_dssp ---CCEEEEEEESSCCHH---HHHHHHHHHTTCSEEEEEEEESCTTC--HHHHHHH--HTTCCEEECCGGGSSS----HH
T ss_pred CCCCCcEEEEEEeCCcHH---HHHHHHHHHcCCCCEEEEEEeCCcch--HHHHHHH--HcCCCEEEeCccccCc----hh
Confidence 778889999888765444 44555555321258888877642222 1111111 2257776654322110 00
Q ss_pred HHHHHHHHhHHHHHHHHHHhhcCCCccEEEeCCCC-ccHHHHHHHhCCceEEEec
Q 012063 81 QIVLAIKRSLSSVRDVFKSLVASTHLMALVVDPFG-TDVFDVAREFYVPSYLYFL 134 (471)
Q Consensus 81 ~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~-~~~~~~A~~lgIP~v~~~~ 134 (471)
.+ .+.+.+. +++.++|+||+=.++ .-...+-+.+.-.++-+++
T Consensus 70 ~~-------d~~~~~~----l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 113 (215)
T 3tqr_A 70 DF-------ESTLQKT----IDHYDPKLIVLAGFMRKLGKAFVSHYSGRMINIHP 113 (215)
T ss_dssp HH-------HHHHHHH----HHTTCCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred Hh-------HHHHHHH----HHhcCCCEEEEccchhhCCHHHHhhccCCeEEeCc
Confidence 00 1122233 345599999975443 3333455555556666554
No 73
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=70.61 E-value=35 Score=31.49 Aligned_cols=39 Identities=23% Similarity=0.157 Sum_probs=32.1
Q ss_pred CcEEEEEcC-CCccCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012063 5 KHHVACMPS-PGMGHLIPHVELAKQLVLRHDISVTFLVPTI 44 (471)
Q Consensus 5 ~~~i~~~~~-p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~ 44 (471)
+++|++++. ++.|-.+-..+||..|+++ |++|.++....
T Consensus 15 ~~~i~~~sgkGGvGKTt~a~~lA~~la~~-g~~vllid~D~ 54 (334)
T 3iqw_A 15 SLRWIFVGGKGGVGKTTTSCSLAIQLAKV-RRSVLLLSTDP 54 (334)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHTTS-SSCEEEEECCS
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHhC-CCcEEEEECCC
Confidence 355655554 8999999999999999875 99999999763
No 74
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=68.65 E-value=21 Score=33.65 Aligned_cols=36 Identities=14% Similarity=0.056 Sum_probs=30.2
Q ss_pred cEEEEEcC-CCccCHHHHHHHHHHHHhCCCcEEEEEeC
Q 012063 6 HHVACMPS-PGMGHLIPHVELAKQLVLRHDISVTFLVP 42 (471)
Q Consensus 6 ~~i~~~~~-p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~ 42 (471)
++|++++. ++.|-.+=..+||..|+++ |.+|.++..
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~-g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQ-GKRVLLAGL 38 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHC-CCCeEEEeC
Confidence 45655554 7889999999999999886 999999987
No 75
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=66.69 E-value=70 Score=29.52 Aligned_cols=39 Identities=10% Similarity=0.102 Sum_probs=32.3
Q ss_pred CcEEEEEcC-CCccCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012063 5 KHHVACMPS-PGMGHLIPHVELAKQLVLRHDISVTFLVPTI 44 (471)
Q Consensus 5 ~~~i~~~~~-p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~ 44 (471)
..+|++++. ++-|-.+-..+||..|+++ |++|.++....
T Consensus 25 ~~~i~v~sgKGGvGKTTvA~~LA~~lA~~-G~rVLlvD~D~ 64 (349)
T 3ug7_A 25 GTKYIMFGGKGGVGKTTMSAATGVYLAEK-GLKVVIVSTDP 64 (349)
T ss_dssp SCEEEEEECSSSTTHHHHHHHHHHHHHHS-SCCEEEEECCT
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 345555544 8999999999999999886 99999999865
No 76
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=64.75 E-value=26 Score=28.22 Aligned_cols=37 Identities=16% Similarity=0.063 Sum_probs=28.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCC
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGP 46 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~ 46 (471)
.+++++..+. | +.|++++++.|.++ |.+|+++ ...+.
T Consensus 24 ~~~llIaGG~-G-ItPl~sm~~~l~~~-~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 24 GKILAIGAYT-G-IVEVYPIAKAWQEI-GNDVTTL-HVTFE 60 (158)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHHH-TCEEEEE-EECBG
T ss_pred CeEEEEEccC-c-HHHHHHHHHHHHhc-CCcEEEE-EeCCH
Confidence 4677776443 4 99999999999875 8899999 65443
No 77
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=63.71 E-value=6.3 Score=36.58 Aligned_cols=37 Identities=16% Similarity=0.182 Sum_probs=31.7
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 012063 8 VACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIG 45 (471)
Q Consensus 8 i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~ 45 (471)
+++..-|+.|-..-++.+|..++.. |..|.|++.+-.
T Consensus 49 iiIaG~pG~GKTt~al~ia~~~a~~-g~~Vl~fSlEms 85 (338)
T 4a1f_A 49 VIIGARPSMGKTSLMMNMVLSALND-DRGVAVFSLEMS 85 (338)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHT-TCEEEEEESSSC
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHc-CCeEEEEeCCCC
Confidence 5677779999999999999999875 999999987643
No 78
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=63.66 E-value=20 Score=33.38 Aligned_cols=39 Identities=13% Similarity=0.107 Sum_probs=32.2
Q ss_pred CCcEEEEEcC-CCccCHHHHHHHHHHHH--hCCCcEEEEEeCC
Q 012063 4 VKHHVACMPS-PGMGHLIPHVELAKQLV--LRHDISVTFLVPT 43 (471)
Q Consensus 4 ~~~~i~~~~~-p~~GH~~P~l~La~~L~--~r~Gh~Vt~~~~~ 43 (471)
..++|++++. ++.|-.+-..+||..|+ ++ |++|.++...
T Consensus 16 ~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~-g~~vllid~D 57 (348)
T 3io3_A 16 DSLKWIFVGGKGGVGKTTTSSSVAVQLALAQP-NEQFLLISTD 57 (348)
T ss_dssp TTCSEEEEECSTTSSHHHHHHHHHHHHHHHCT-TSCEEEEECC
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcC-CCeEEEEECC
Confidence 3456666654 89999999999999998 65 9999999986
No 79
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=62.10 E-value=65 Score=28.30 Aligned_cols=39 Identities=21% Similarity=0.185 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCC
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPP 47 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~ 47 (471)
|||++.--=+. |--=+..|+++|.+ .| +|++++|.....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~-~g-~V~VVAP~~~~S 40 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALRE-FA-DVQVVAPDRNRS 40 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTT-TS-EEEEEEESSCCT
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHh-CC-cEEEEeeCCCCc
Confidence 56666654222 22336778899954 35 999999876553
No 80
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=61.90 E-value=78 Score=27.28 Aligned_cols=109 Identities=4% Similarity=-0.087 Sum_probs=55.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCC-CcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCCcchhHHHHH
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRH-DISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFEEDVKAEIQI 82 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~ 82 (471)
.+++|+++.+++.. -+.++.++|.+.. +++|..+.+..... ....+.. ..++.+..++...... .
T Consensus 21 ~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~--~~~~~A~--~~gIp~~~~~~~~~~~-r------ 86 (229)
T 3auf_A 21 HMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADA--YGLERAR--RAGVDALHMDPAAYPS-R------ 86 (229)
T ss_dssp TCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTC--HHHHHHH--HTTCEEEECCGGGSSS-H------
T ss_pred CCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCch--HHHHHHH--HcCCCEEEECcccccc-h------
Confidence 45799998766532 3677777885432 57887766542221 1222222 2367877654322110 0
Q ss_pred HHHHHHhHHHHHHHHHHhhcCCCccEEEeCCCC-ccHHHHHHHhCCceEEEec
Q 012063 83 VLAIKRSLSSVRDVFKSLVASTHLMALVVDPFG-TDVFDVAREFYVPSYLYFL 134 (471)
Q Consensus 83 ~~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~-~~~~~~A~~lgIP~v~~~~ 134 (471)
. ...+.+.+.++ +.+||+||+=.++ .-...+-+.+...++-+++
T Consensus 87 -~---~~~~~~~~~l~----~~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHp 131 (229)
T 3auf_A 87 -T---AFDAALAERLQ----AYGVDLVCLAGYMRLVRGPMLTAFPNRILNIHP 131 (229)
T ss_dssp -H---HHHHHHHHHHH----HTTCSEEEESSCCSCCCHHHHHHSTTCEEEEES
T ss_pred -h---hccHHHHHHHH----hcCCCEEEEcChhHhCCHHHHhhccCCEEEEcc
Confidence 0 01122233334 3499999975443 3333455555556666554
No 81
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=61.88 E-value=67 Score=27.38 Aligned_cols=106 Identities=7% Similarity=-0.008 Sum_probs=51.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCc--EEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCCcchhHHHHHH
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRHDI--SVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFEEDVKAEIQIV 83 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh--~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~ 83 (471)
++|+++.++.. .-+.++.++|.+. +| +|..+.+..... ....... ..++.+..++..... + .
T Consensus 2 ~rI~vl~SG~g---~~~~~~l~~l~~~-~~~~~i~~Vvs~~~~~--~~~~~A~--~~gIp~~~~~~~~~~-~-------r 65 (216)
T 2ywr_A 2 LKIGVLVSGRG---SNLQAIIDAIESG-KVNASIELVISDNPKA--YAIERCK--KHNVECKVIQRKEFP-S-------K 65 (216)
T ss_dssp EEEEEEECSCC---HHHHHHHHHHHTT-SSCEEEEEEEESCTTC--HHHHHHH--HHTCCEEECCGGGSS-S-------H
T ss_pred CEEEEEEeCCc---HHHHHHHHHHHhC-CCCCeEEEEEeCCCCh--HHHHHHH--HcCCCEEEeCccccc-c-------h
Confidence 58888866554 2467777888654 67 776665532222 1212211 125666654332111 0 0
Q ss_pred HHHHHhHHHHHHHHHHhhcCCCccEEEeCCCC-ccHHHHHHHhCCceEEEec
Q 012063 84 LAIKRSLSSVRDVFKSLVASTHLMALVVDPFG-TDVFDVAREFYVPSYLYFL 134 (471)
Q Consensus 84 ~~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~-~~~~~~A~~lgIP~v~~~~ 134 (471)
.. ..+.+.+.++ +.++|++|+=.++ .-...+-+.+.-.++.+++
T Consensus 66 ~~---~~~~~~~~l~----~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 110 (216)
T 2ywr_A 66 KE---FEERMALELK----KKGVELVVLAGFMRILSHNFLKYFPNKVINIHP 110 (216)
T ss_dssp HH---HHHHHHHHHH----HTTCCEEEESSCCSCCCHHHHTTSTTCEEEEES
T ss_pred hh---hhHHHHHHHH----hcCCCEEEEeCchhhCCHHHHhhccCCeEEEcC
Confidence 00 0112223334 3499999965442 2233344445455666553
No 82
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=60.91 E-value=44 Score=29.65 Aligned_cols=40 Identities=15% Similarity=0.150 Sum_probs=31.3
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012063 4 VKHHVACMPS--PGMGHLIPHVELAKQLVLRHDISVTFLVPTI 44 (471)
Q Consensus 4 ~~~~i~~~~~--p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~ 44 (471)
.++++++++. |+.|=..=...||..|+++ |.+|.++-...
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~-G~rVLLID~D~ 121 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQA-GYKTLIVDGDM 121 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhC-CCeEEEEeCCC
Confidence 3455555543 7889999999999999876 99999997653
No 83
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=60.54 E-value=7.3 Score=37.97 Aligned_cols=37 Identities=19% Similarity=0.167 Sum_probs=27.8
Q ss_pred cEEEEEcC---C---CccCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 012063 6 HHVACMPS---P---GMGHLIPHVELAKQLVLRHDISVTFLVPT 43 (471)
Q Consensus 6 ~~i~~~~~---p---~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~ 43 (471)
|+|++++. | .-|=-.-...|+++|+++ ||+|+++++.
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~-G~~V~vi~~~ 43 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIAD-GVDARVLLPA 43 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHT-TCEEEEEEEC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHc-CCEEEEEecC
Confidence 67888875 2 233346677899999876 9999999964
No 84
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=60.41 E-value=28 Score=29.24 Aligned_cols=42 Identities=10% Similarity=0.005 Sum_probs=30.6
Q ss_pred HHHHHHHHHhhcCCCccEEEeCCCCccHHHHHHHhCCceEEEecch
Q 012063 91 SSVRDVFKSLVASTHLMALVVDPFGTDVFDVAREFYVPSYLYFLTN 136 (471)
Q Consensus 91 ~~l~~~l~~~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~~~~~~ 136 (471)
....+.++++ .+.++|+||.|.. ...+|+++|+|.+.+.++.
T Consensus 129 ~e~~~~i~~l-~~~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 129 DEITTLISKV-KTENIKIVVSGKT---VTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp GGHHHHHHHH-HHTTCCEEEECHH---HHHHHHHTTCEEEECCCCH
T ss_pred HHHHHHHHHH-HHCCCeEEECCHH---HHHHHHHcCCcEEEEecCH
Confidence 4455555554 3458999999863 5679999999988877643
No 85
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=60.36 E-value=82 Score=27.02 Aligned_cols=152 Identities=12% Similarity=-0.031 Sum_probs=77.5
Q ss_pred hhccCCCccEEEEEeCCCcCCCHHhHHHHHHHHHhCCCceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCC
Q 012063 260 WLDNQASGSVLFVSFGSGGTLSYDQLEELALGLELSEQQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQ 339 (471)
Q Consensus 260 wl~~~~~~~~i~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 339 (471)
|++-. .++++.|..|.+ -...++.|...+..+.++... +.+++.+-....
T Consensus 26 fl~L~-gk~VLVVGgG~v-------a~~ka~~Ll~~GA~VtVvap~----------------------~~~~l~~l~~~~ 75 (223)
T 3dfz_A 26 MLDLK-GRSVLVVGGGTI-------ATRRIKGFLQEGAAITVVAPT----------------------VSAEINEWEAKG 75 (223)
T ss_dssp EECCT-TCCEEEECCSHH-------HHHHHHHHGGGCCCEEEECSS----------------------CCHHHHHHHHTT
T ss_pred EEEcC-CCEEEEECCCHH-------HHHHHHHHHHCCCEEEEECCC----------------------CCHHHHHHHHcC
Confidence 45543 356888876643 234556666667766554322 113333222223
Q ss_pred CeeeccCcchhhhhcCCcccccccccCchhHHHHHhh----CCceeeccccccchhhHH-----HHHhhhcceeecCCCC
Q 012063 340 GLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLESIVH----GVPLIAWPLYAEQRLNAV-----ILSEDLNVALRPPEYE 410 (471)
Q Consensus 340 ~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~-----~~~~~~G~g~~~~~~~ 410 (471)
++.+..-.-+.+-|..++ ++|.--|.-.+.+.++. |+|+-+ .|.+..+. .+.+ -++-+.+....
T Consensus 76 ~i~~i~~~~~~~dL~~ad--LVIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~r-g~l~iaIST~G 148 (223)
T 3dfz_A 76 QLRVKRKKVGEEDLLNVF--FIVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSR-GRLSLAISTDG 148 (223)
T ss_dssp SCEEECSCCCGGGSSSCS--EEEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEE-TTEEEEEECTT
T ss_pred CcEEEECCCCHhHhCCCC--EEEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEe-CCEEEEEECCC
Confidence 343332222344566777 88887776655555443 444322 35444332 2222 23333333322
Q ss_pred CCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHH
Q 012063 411 NGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAA 449 (471)
Q Consensus 411 ~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~ 449 (471)
....-+..|++.|.+.+- ++...+.+.+.++++.+++.
T Consensus 149 ~sP~la~~iR~~ie~~lp-~~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 149 ASPLLTKRIKEDLSSNYD-ESYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp SCHHHHHHHHHHHHHHSC-THHHHHHHHHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHHHHcc-HHHHHHHHHHHHHHHHHHHH
Confidence 123446788888888874 34456777888888887763
No 86
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=59.95 E-value=25 Score=32.16 Aligned_cols=37 Identities=8% Similarity=0.023 Sum_probs=31.0
Q ss_pred EEEEEc-CCCccCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012063 7 HVACMP-SPGMGHLIPHVELAKQLVLRHDISVTFLVPTI 44 (471)
Q Consensus 7 ~i~~~~-~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~ 44 (471)
+|++++ -++-|-.+-..+||..|+++ |++|.++....
T Consensus 15 ~i~v~sgKGGvGKTTvA~~LA~~lA~~-G~rVLlvD~D~ 52 (324)
T 3zq6_A 15 TFVFIGGKGGVGKTTISAATALWMARS-GKKTLVISTDP 52 (324)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHHHHT-TCCEEEEECCS
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 454444 48999999999999999886 99999999865
No 87
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=59.12 E-value=9.3 Score=37.01 Aligned_cols=38 Identities=16% Similarity=0.242 Sum_probs=31.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012063 7 HVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTI 44 (471)
Q Consensus 7 ~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~ 44 (471)
-+++..-|+.|-..-.+.+|...+.+.|..|.|++.+-
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~ 239 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEM 239 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 35677789999999999999999764588999998763
No 88
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=59.07 E-value=66 Score=28.16 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=29.6
Q ss_pred CCCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCcEEEEEeC
Q 012063 3 QVKHHVACMPS--PGMGHLIPHVELAKQLVLRHDISVTFLVP 42 (471)
Q Consensus 3 ~~~~~i~~~~~--p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~ 42 (471)
.++|+.++++. ..-|=..-...|++.|.++ |++|.++=|
T Consensus 23 ~~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~-G~~V~~fKP 63 (251)
T 3fgn_A 23 QSHMTILVVTGTGTGVGKTVVCAALASAARQA-GIDVAVCKP 63 (251)
T ss_dssp CSSCEEEEEEESSTTSCHHHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred ccCCCEEEEEeCCCCCcHHHHHHHHHHHHHHC-CCeEEEEee
Confidence 34565555444 4678899999999999775 999999863
No 89
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=58.63 E-value=11 Score=36.56 Aligned_cols=38 Identities=11% Similarity=0.260 Sum_probs=31.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012063 7 HVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTI 44 (471)
Q Consensus 7 ~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~ 44 (471)
-+++...|+.|=..-++.+|..++.+.|..|.|++.+.
T Consensus 205 liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~ 242 (454)
T 2r6a_A 205 LIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEM 242 (454)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 46777889999999999999999764488999998653
No 90
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=56.87 E-value=17 Score=33.26 Aligned_cols=36 Identities=22% Similarity=0.183 Sum_probs=30.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 012063 7 HVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPT 43 (471)
Q Consensus 7 ~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~ 43 (471)
-+++..-|+.|-..-.+.+|...+.+ |..|.+++.+
T Consensus 70 l~li~G~pG~GKTtl~l~ia~~~a~~-g~~vl~~slE 105 (315)
T 3bh0_A 70 FVLIAARPSMGKTAFALKQAKNMSDN-DDVVNLHSLE 105 (315)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTT-TCEEEEEESS
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHc-CCeEEEEECC
Confidence 35677779999999999999999775 8999999876
No 91
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=55.99 E-value=61 Score=29.11 Aligned_cols=38 Identities=13% Similarity=0.076 Sum_probs=31.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTI 44 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~ 44 (471)
..|++..-++.|=.+=...||..|+++ |++|.++-...
T Consensus 42 ~vI~v~~KGGvGKTT~a~nLA~~La~~-G~~VlliD~D~ 79 (307)
T 3end_A 42 KVFAVYGKGGIGKSTTSSNLSAAFSIL-GKRVLQIGCDP 79 (307)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHT-TCCEEEEEESS
T ss_pred eEEEEECCCCccHHHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 345666668889999999999999886 99999997543
No 92
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=54.26 E-value=10 Score=39.47 Aligned_cols=113 Identities=12% Similarity=0.095 Sum_probs=78.5
Q ss_pred eccCcchhhhhcCCcccccccccCchhHHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCCC--CC--ccCHHH
Q 012063 343 VPSWAPQVEVLGHPSTGGFLTHCGWNSTLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYE--NG--LIKREE 418 (471)
Q Consensus 343 v~~~~pq~~~L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~--~~--~~~~~~ 418 (471)
+.++.+-.++|..++ ++||-- ...+.|.+..++|+|....-.|++.+- . .| ...+..+ .| .-+.++
T Consensus 603 ~~~~~di~~ll~~aD--~lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~----~-rg--~y~d~~~~~pg~~~~~~~e 672 (729)
T 3l7i_A 603 VSNYNDVSELFLISD--CLITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG----L-RG--FYMNYMEDLPGPIYTEPYG 672 (729)
T ss_dssp CTTCSCHHHHHHTCS--EEEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS----C-CS--BSSCTTSSSSSCEESSHHH
T ss_pred CCCCcCHHHHHHHhC--EEEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc----c-CC--cccChhHhCCCCeECCHHH
Confidence 455666678898888 999975 578899999999999987766665431 1 13 2322111 01 246789
Q ss_pred HHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHH
Q 012063 419 IAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVHKWK 468 (471)
Q Consensus 419 l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 468 (471)
|.++|.+...+ ...++++.+++.+.+... +.|.++++.++.+++...
T Consensus 673 L~~~i~~~~~~--~~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 673 LAKELKNLDKV--QQQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHHHTTHHHH--HHHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhcc--chhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCc
Confidence 99998877642 156788888888887654 557888888888877654
No 93
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=52.68 E-value=77 Score=27.63 Aligned_cols=24 Identities=17% Similarity=0.084 Sum_probs=18.6
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCCCCC
Q 012063 22 HVELAKQLVLRHDISVTFLVPTIGPP 47 (471)
Q Consensus 22 ~l~La~~L~~r~Gh~Vt~~~~~~~~~ 47 (471)
+..|+++|.+ .| +|++++|...+.
T Consensus 16 i~aL~~~l~~-~g-~V~VVAP~~~~S 39 (244)
T 2e6c_A 16 LWALAEAASQ-FG-EVFVAAPDTEQS 39 (244)
T ss_dssp HHHHHHHHTT-TS-EEEEEEECSSCC
T ss_pred HHHHHHHHHh-CC-CEEEEecCCCCc
Confidence 6789999955 47 899999876554
No 94
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=52.25 E-value=77 Score=27.68 Aligned_cols=24 Identities=21% Similarity=0.191 Sum_probs=18.5
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCCCCC
Q 012063 22 HVELAKQLVLRHDISVTFLVPTIGPP 47 (471)
Q Consensus 22 ~l~La~~L~~r~Gh~Vt~~~~~~~~~ 47 (471)
+..|+++|.+ .| +|++++|..++.
T Consensus 16 i~aL~~~l~~-~g-~V~VVAP~~~~S 39 (247)
T 1j9j_A 16 IIVLAELLSE-EH-EVFVVAPDKERS 39 (247)
T ss_dssp HHHHHHHHTT-TS-EEEEEEESSCCT
T ss_pred HHHHHHHHHh-CC-CEEEEecCCCCc
Confidence 6789999955 47 899999876553
No 95
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=51.33 E-value=79 Score=27.08 Aligned_cols=37 Identities=14% Similarity=0.184 Sum_probs=29.9
Q ss_pred EEEEEcC-CCccCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012063 7 HVACMPS-PGMGHLIPHVELAKQLVLRHDISVTFLVPTI 44 (471)
Q Consensus 7 ~i~~~~~-p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~ 44 (471)
.+.++.. ++.|=.+-++.++..+..+ |.+|.++.+..
T Consensus 13 ~i~litG~mGsGKTT~ll~~~~r~~~~-g~kVli~~~~~ 50 (223)
T 2b8t_A 13 WIEFITGPMFAGKTAELIRRLHRLEYA-DVKYLVFKPKI 50 (223)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHHHHT-TCCEEEEEECC
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHhc-CCEEEEEEecc
Confidence 4555555 5999999999999999876 99999987653
No 96
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=50.92 E-value=9.9 Score=34.02 Aligned_cols=51 Identities=18% Similarity=0.155 Sum_probs=37.2
Q ss_pred cccccccCchhHHHHHhh------CCceeeccccccchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCC
Q 012063 359 GGFLTHCGWNSTLESIVH------GVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHG 429 (471)
Q Consensus 359 ~~~ItHgG~~s~~eal~~------GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 429 (471)
+++|+=||-||+.+++.. ++|++.+|... +|. + .+ +.++++.++++.++++
T Consensus 37 D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G~------------lgf---l--~~---~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 37 EIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTGH------------LGF---Y--AD---WRPAEADKLVKLLAKG 93 (272)
T ss_dssp SEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESSS------------CCS---S--CC---BCGGGHHHHHHHHHTT
T ss_pred CEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCCC------------CCc---C--Cc---CCHHHHHHHHHHHHcC
Confidence 399999999999999875 88999987521 221 1 11 4577788888888865
No 97
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=48.63 E-value=73 Score=28.63 Aligned_cols=39 Identities=18% Similarity=0.329 Sum_probs=30.5
Q ss_pred CcEEEEEcC--CCccCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012063 5 KHHVACMPS--PGMGHLIPHVELAKQLVLRHDISVTFLVPTI 44 (471)
Q Consensus 5 ~~~i~~~~~--p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~ 44 (471)
++++++++. |+.|=..=...||..|+++ |.+|.++-...
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~-G~rVLLID~D~ 143 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQS-DQKVLFIDADL 143 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHHT-TCCEEEEECCT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHhC-CCcEEEEECCC
Confidence 344444433 7889999999999999886 99999997654
No 98
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=45.98 E-value=28 Score=27.26 Aligned_cols=37 Identities=11% Similarity=-0.022 Sum_probs=32.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeC
Q 012063 5 KHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVP 42 (471)
Q Consensus 5 ~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~ 42 (471)
+.+|++.+.+.-+|-....-++..|.. +|++|.+...
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~-~G~~Vi~lG~ 39 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTN-AGFNVVNIGV 39 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHH-TTCEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHH-CCCEEEECCC
Confidence 468999999999999999999999966 4999998864
No 99
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=45.77 E-value=1.4e+02 Score=27.00 Aligned_cols=34 Identities=9% Similarity=0.077 Sum_probs=23.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPT 43 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~ 43 (471)
++|+|+|+-.|..+ ....++|.++ ||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~-~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSS-GHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHT-TCEEEEEECC
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHC-CCcEEEEEeC
Confidence 46899999876433 4445666665 9999877764
No 100
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=45.39 E-value=15 Score=32.57 Aligned_cols=53 Identities=15% Similarity=0.236 Sum_probs=38.8
Q ss_pred CCcccccccccCchhHHHHHhh---CCceeeccccccchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCC
Q 012063 355 HPSTGGFLTHCGWNSTLESIVH---GVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHG 429 (471)
Q Consensus 355 ~~~~~~~ItHgG~~s~~eal~~---GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 429 (471)
.++ ++|+=||-||+.+++.. ++|.+.++.. . +|.-. + +.++++.++++.++++
T Consensus 41 ~~D--~vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~-~Gfl~-----~---~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TAD--LIVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------R-LGFLT-----S---YTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCS--EEEEEECHHHHHHHHTTBCTTCEEEEEESS-----------S-CCSSC-----C---BCGGGHHHHHHHHHTT
T ss_pred CCC--EEEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------C-CCccC-----c---CCHHHHHHHHHHHHcC
Confidence 345 99999999999999887 7888888632 1 22111 1 5578888889888875
No 101
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=44.36 E-value=1.5e+02 Score=25.23 Aligned_cols=105 Identities=9% Similarity=0.048 Sum_probs=0.0
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCC---cEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCCcchh
Q 012063 1 MAQVKHHVACMPSPGMGHLIPHVELAKQLVLRHD---ISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFEEDVK 77 (471)
Q Consensus 1 m~~~~~~i~~~~~p~~GH~~P~l~La~~L~~r~G---h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~ 77 (471)
| .+|+||+++-++..+- +.+|.+++ ++ | ++|..+.+..... ...+...... +.+..++......
T Consensus 5 ~-~~~~ri~vl~SG~gsn---l~all~~~-~~-~~~~~~I~~Vis~~~~a--~~l~~A~~~g--Ip~~~~~~~~~~~--- 71 (215)
T 3kcq_A 5 M-KKELRVGVLISGRGSN---LEALAKAF-ST-EESSVVISCVISNNAEA--RGLLIAQSYG--IPTFVVKRKPLDI--- 71 (215)
T ss_dssp ---CCEEEEEEESSCCHH---HHHHHHHT-CC-C-CSEEEEEEEESCTTC--THHHHHHHTT--CCEEECCBTTBCH---
T ss_pred C-CCCCEEEEEEECCcHH---HHHHHHHH-Hc-CCCCcEEEEEEeCCcch--HHHHHHHHcC--CCEEEeCcccCCh---
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhcCCCccEEE-eCCCCccHHHHHHHhCCceEEEecc
Q 012063 78 AEIQIVLAIKRSLSSVRDVFKSLVASTHLMALV-VDPFGTDVFDVAREFYVPSYLYFLT 135 (471)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI-~D~~~~~~~~~A~~lgIP~v~~~~~ 135 (471)
+.+.+.++++ +||+|| +.+.-.-...+-+.+.-.++-++++
T Consensus 72 -------------~~~~~~L~~~----~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 72 -------------EHISTVLREH----DVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp -------------HHHHHHHHHT----TCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -------------HHHHHHHHHh----CCCEEEEeCCceEeCHHHHhhccCCeEEECcc
No 102
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=42.76 E-value=27 Score=30.17 Aligned_cols=40 Identities=18% Similarity=0.170 Sum_probs=35.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTI 44 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~ 44 (471)
.+++|++..-|+.|-.+=++.+|..|+++ |++|.++....
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~~-G~~V~v~d~D~ 44 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLRQ-GVRVMAGVVET 44 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 47899999999999999999999999886 99998887654
No 103
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=41.58 E-value=76 Score=30.48 Aligned_cols=41 Identities=17% Similarity=0.179 Sum_probs=34.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCC
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPP 47 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~ 47 (471)
..|+++..++.|-.+=...||..|+++ |++|.+++.+.+.+
T Consensus 101 ~vIlivG~~G~GKTTt~~kLA~~l~~~-G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 101 TILLMVGIQGSGKTTTVAKLARYFQKR-GYKVGVVCSDTWRP 141 (443)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHTT-TCCEEEEECCCSST
T ss_pred eEEEEECcCCCCHHHHHHHHHHHHHHC-CCeEEEEeCCCcch
Confidence 456777789999999999999999765 99999999765544
No 104
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=41.55 E-value=17 Score=31.56 Aligned_cols=36 Identities=19% Similarity=0.114 Sum_probs=29.5
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeC
Q 012063 1 MAQVKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVP 42 (471)
Q Consensus 1 m~~~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~ 42 (471)
|...+|+|.++-.+..|- +||+.|.++ ||+|+.+..
T Consensus 2 ~~~~~mkI~IIG~G~~G~-----sLA~~L~~~-G~~V~~~~~ 37 (232)
T 3dfu_A 2 MQAPRLRVGIFDDGSSTV-----NMAEKLDSV-GHYVTVLHA 37 (232)
T ss_dssp -CCCCCEEEEECCSCCCS-----CHHHHHHHT-TCEEEECSS
T ss_pred CCCCCcEEEEEeeCHHHH-----HHHHHHHHC-CCEEEEecC
Confidence 667789999999999985 689999775 999998753
No 105
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=41.48 E-value=37 Score=28.71 Aligned_cols=45 Identities=18% Similarity=0.025 Sum_probs=33.6
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCC
Q 012063 1 MAQVKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGP 46 (471)
Q Consensus 1 m~~~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~ 46 (471)
|.-.+.||++--.++.|=+.=.+.|.++|.++ |++|.++.++.-.
T Consensus 3 m~l~~k~I~lgiTGs~aa~~k~~~ll~~L~~~-g~eV~vv~T~~A~ 47 (201)
T 3lqk_A 3 MNFAGKHVGFGLTGSHCTYHEVLPQMERLVEL-GAKVTPFVTHTVQ 47 (201)
T ss_dssp CCCTTCEEEEECCSCGGGGGGTHHHHHHHHHT-TCEEEEECSSCSC
T ss_pred CCcCCCEEEEEEEChHHHHHHHHHHHHHHhhC-CCEEEEEEChhHH
Confidence 55455688888878744342789999999775 9999999877443
No 106
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=41.16 E-value=61 Score=27.69 Aligned_cols=39 Identities=10% Similarity=-0.031 Sum_probs=29.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 012063 7 HVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIG 45 (471)
Q Consensus 7 ~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~ 45 (471)
-+++..-|+.|-..-.+++|...+.+.|..|.+++.+..
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~ 70 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEER 70 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSC
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCC
Confidence 456777799999999999887654444788999887643
No 107
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=40.46 E-value=1e+02 Score=26.27 Aligned_cols=45 Identities=9% Similarity=0.058 Sum_probs=29.0
Q ss_pred eeeccCcch-hhhhcCCcccccccccCchhHHHHH---------hhCCceeeccc
Q 012063 341 LVVPSWAPQ-VEVLGHPSTGGFLTHCGWNSTLESI---------VHGVPLIAWPL 385 (471)
Q Consensus 341 v~v~~~~pq-~~~L~~~~~~~~ItHgG~~s~~eal---------~~GvP~l~~P~ 385 (471)
+.+....+. ..++..-+..+++--||.||+-|.. .+++|++++-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 444455543 3333333334777889999988876 47999999863
No 108
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=40.43 E-value=1.5e+02 Score=24.15 Aligned_cols=145 Identities=16% Similarity=0.187 Sum_probs=75.6
Q ss_pred ccEEEEEeCCCcCCCHHhHHHHHHHHHhCCCceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccC
Q 012063 267 GSVLFVSFGSGGTLSYDQLEELALGLELSEQQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSW 346 (471)
Q Consensus 267 ~~~i~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ 346 (471)
.|.|-|-.||.. +-+..++....|+.++..+-..+-+..+ .|+.+. +|
T Consensus 12 ~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR-------------------~p~~l~-----------~~ 59 (173)
T 4grd_A 12 APLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSAHR-------------------MPDEMF-----------DY 59 (173)
T ss_dssp SCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------SHHHHH-----------HH
T ss_pred CCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcccc-------------------CHHHHH-----------HH
Confidence 456777788855 3455678888888888765444433322 444332 22
Q ss_pred cchhhhhcCCcccccccccCc----hhHHHHHhhCCceeeccccccch--hhH--HHHHhhhcceeec-CCCCCCccCHH
Q 012063 347 APQVEVLGHPSTGGFLTHCGW----NSTLESIVHGVPLIAWPLYAEQR--LNA--VILSEDLNVALRP-PEYENGLIKRE 417 (471)
Q Consensus 347 ~pq~~~L~~~~~~~~ItHgG~----~s~~eal~~GvP~l~~P~~~DQ~--~na--~~~~~~~G~g~~~-~~~~~~~~~~~ 417 (471)
+.... .-.++++|.=.|. -++..+ ..-+|+|.+|...... ..+ ..++=-.|+.+.. ....++..++.
T Consensus 60 ~~~a~---~~g~~ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAa 135 (173)
T 4grd_A 60 AEKAR---ERGLRAIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAA 135 (173)
T ss_dssp HHHHT---TTTCSEEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHH
T ss_pred HHHHH---hcCCeEEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHH
Confidence 22211 1122255554442 244444 4579999999865421 111 1111112443321 11100123444
Q ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhh
Q 012063 418 EIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVS 451 (471)
Q Consensus 418 ~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~ 451 (471)
-++..|- -+.| ++++++.++++++.++.+.
T Consensus 136 llA~~IL-a~~d---~~l~~kl~~~r~~~~~~v~ 165 (173)
T 4grd_A 136 LFAVSIL-SGNS---VDYANRLAAFRVRQNEAAH 165 (173)
T ss_dssp HHHHHHH-TTSC---HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-cCCC---HHHHHHHHHHHHHHHHHHH
Confidence 5555553 3456 8899999998888877544
No 109
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=40.13 E-value=21 Score=31.31 Aligned_cols=43 Identities=19% Similarity=0.176 Sum_probs=31.8
Q ss_pred CCCCCcEEEEEc--CCCccCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012063 1 MAQVKHHVACMP--SPGMGHLIPHVELAKQLVLRHDISVTFLVPTI 44 (471)
Q Consensus 1 m~~~~~~i~~~~--~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~ 44 (471)
|.+.+++++.+. -++.|-.+=...||..|+++ |++|.++-...
T Consensus 1 m~~~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~-g~~VlliD~D~ 45 (257)
T 1wcv_1 1 MLRAKVRRIALANQKGGVGKTTTAINLAAYLARL-GKRVLLVDLDP 45 (257)
T ss_dssp ----CCCEEEECCSSCCHHHHHHHHHHHHHHHHT-TCCEEEEECCT
T ss_pred CCCCCCEEEEEEeCCCCchHHHHHHHHHHHHHHC-CCCEEEEECCC
Confidence 777777766554 37889999999999999876 99999997543
No 110
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=39.71 E-value=23 Score=28.66 Aligned_cols=38 Identities=16% Similarity=-0.027 Sum_probs=33.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeC
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVP 42 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~ 42 (471)
.+.+|++.+.++-+|-....-++..|.. +|++|.+...
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~-~G~eVi~lG~ 54 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRD-AGFEVVYTGL 54 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHH-TTCEEECCCS
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHH-CCCEEEECCC
Confidence 4679999999999999999999999966 5999998754
No 111
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=39.69 E-value=42 Score=28.50 Aligned_cols=40 Identities=20% Similarity=0.262 Sum_probs=32.7
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 012063 1 MAQVKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPT 43 (471)
Q Consensus 1 m~~~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~ 43 (471)
|.+. .||++--.++-|-+. ...|.++|.++ |++|.++.++
T Consensus 1 m~~~-k~IllgvTGaiaa~k-~~~ll~~L~~~-g~eV~vv~T~ 40 (209)
T 3zqu_A 1 MSGP-ERITLAMTGASGAQY-GLRLLDCLVQE-EREVHFLISK 40 (209)
T ss_dssp CCSC-SEEEEEECSSSCHHH-HHHHHHHHHHT-TCEEEEEECH
T ss_pred CCCC-CEEEEEEECHHHHHH-HHHHHHHHHHC-CCEEEEEECc
Confidence 5555 578887778888777 88999999775 9999999876
No 112
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=39.15 E-value=1.8e+02 Score=24.61 Aligned_cols=107 Identities=8% Similarity=0.015 Sum_probs=53.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCC-CcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCCcchhHHHHHHH
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRH-DISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFEEDVKAEIQIVL 84 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ 84 (471)
++|+++-+++.+ -+.++.++|.+.. +|+|..+.+..... ....... ..++.+..++...... ...
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~--~v~~~A~--~~gIp~~~~~~~~~~~----~~~--- 69 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGA--KVIERAA--RENVPAFVFSPKDYPS----KAA--- 69 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTC--HHHHHHH--HTTCCEEECCGGGSSS----HHH---
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCc--HHHHHHH--HcCCCEEEeCcccccc----hhh---
Confidence 578777766543 3666777885432 58888776542221 2222222 2257766553322110 000
Q ss_pred HHHHhHHHHHHHHHHhhcCCCccEEEeCCCC-ccHHHHHHHhCCceEEEec
Q 012063 85 AIKRSLSSVRDVFKSLVASTHLMALVVDPFG-TDVFDVAREFYVPSYLYFL 134 (471)
Q Consensus 85 ~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~-~~~~~~A~~lgIP~v~~~~ 134 (471)
..+.+.+.++ +.+||++|+=.++ .-...+-+.+.-.++.+++
T Consensus 70 ----~~~~~~~~l~----~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 112 (212)
T 3av3_A 70 ----FESEILRELK----GRQIDWIALAGYMRLIGPTLLSAYEGKIVNIHP 112 (212)
T ss_dssp ----HHHHHHHHHH----HTTCCEEEESSCCSCCCHHHHHHTTTCEEEEES
T ss_pred ----hHHHHHHHHH----hcCCCEEEEchhhhhCCHHHHhhhcCCEEEEec
Confidence 1112223333 4499999965433 3333455555556666554
No 113
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=38.61 E-value=43 Score=32.84 Aligned_cols=38 Identities=13% Similarity=-0.060 Sum_probs=31.5
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 012063 8 VACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIG 45 (471)
Q Consensus 8 i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~ 45 (471)
+++...|+.|=..-.+++|..++.+.|..|.+++.+..
T Consensus 245 ~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s 282 (503)
T 1q57_A 245 IMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEES 282 (503)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSC
T ss_pred EEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCC
Confidence 56677799999999999999997644899999987643
No 114
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=38.05 E-value=24 Score=29.36 Aligned_cols=58 Identities=10% Similarity=0.162 Sum_probs=34.5
Q ss_pred HHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCc----hHHHHHHHHHHHHHHHH----HhhcCCCHHHHHHH
Q 012063 396 LSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGED----GVIIRDRMNRLKDAAAA----AVSDGGSSTKTLSQ 462 (471)
Q Consensus 396 ~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~----~~~~r~~a~~l~~~~~~----~~~~~g~~~~~~~~ 462 (471)
.++..|+|+. +|+|++.++|.++++... .+.|+ +.-.+-..+++ -++.+..-...+++
T Consensus 107 Fe~~cGVGV~--------VT~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~ 172 (187)
T 3tl4_X 107 MNENSGVGIE--------ITEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQ 172 (187)
T ss_dssp HHHTTTTTCC--------CCHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHH
T ss_pred HHHHCCCCeE--------eCHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHH
Confidence 3443899998 689999999999996422 12344 44444444443 12334454555553
No 115
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=37.67 E-value=48 Score=29.21 Aligned_cols=39 Identities=23% Similarity=0.137 Sum_probs=34.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPT 43 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~ 43 (471)
.+.+|++.+.++..|-....-++..|.. +|++|.++...
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~-~G~~Vi~LG~~ 160 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRA-NGYNVVDLGRD 160 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHH-TTCEEEEEEEE
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHH-CCCEEEECCCC
Confidence 4679999999999999999999999976 59999998753
No 116
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=37.56 E-value=35 Score=28.91 Aligned_cols=38 Identities=18% Similarity=-0.061 Sum_probs=33.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeC
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVP 42 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~ 42 (471)
.+.+|++.+.++..|-....-++..|.. +|++|.++..
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~-~G~~v~~LG~ 124 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLES-GGFTVYNLGV 124 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHH-TTCEEEECCS
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHH-CCCEEEECCC
Confidence 3568999999999999999999999966 4999999864
No 117
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=37.53 E-value=94 Score=21.04 Aligned_cols=54 Identities=11% Similarity=0.060 Sum_probs=32.6
Q ss_pred CccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHh-hcCCCHH-HHHHHHHHHH
Q 012063 412 GLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAV-SDGGSST-KTLSQLVHKW 467 (471)
Q Consensus 412 ~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~-~~~g~~~-~~~~~~~~~~ 467 (471)
+..|.++|.++|+++|.+-+.+.+.. +.+++.+.+.. +-.=+.. ..|.+.+...
T Consensus 10 ~~Psd~ei~~~I~~IL~~aDL~tvT~--K~VR~~Le~~~pg~dLs~kK~~I~~~I~~~ 65 (70)
T 1q1v_A 10 KPPTDEELKETIKKLLASANLEEVTM--KQICKKVYENYPTYDLTERKDFIKTTVKEL 65 (70)
T ss_dssp CCCCHHHHHHHHHHHHTTSCGGGCCH--HHHHHHHHHHCSSSCCSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHhCCHHHHhH--HHHHHHHHHHccCCCChHHHHHHHHHHHHH
Confidence 45889999999999998755444442 44555555543 3333333 2555555544
No 118
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=36.69 E-value=73 Score=23.39 Aligned_cols=34 Identities=18% Similarity=0.302 Sum_probs=29.0
Q ss_pred EEEEEeCCCcCCCHHhHHHHHHHHHhCCCceEEEEecC
Q 012063 269 VLFVSFGSGGTLSYDQLEELALGLELSEQQFLWVVKSP 306 (471)
Q Consensus 269 ~i~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~ 306 (471)
-|||-|.| +++.+.++++-+++.+.+++..++..
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 58888877 78999999999999999998877654
No 119
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=35.36 E-value=99 Score=27.48 Aligned_cols=89 Identities=7% Similarity=-0.168 Sum_probs=49.6
Q ss_pred CCcccccccccCchhHHHHH-----hh---CCceeeccccccchhhHH-----HHHhhhc-ceeecCCCCCCccCHHHHH
Q 012063 355 HPSTGGFLTHCGWNSTLESI-----VH---GVPLIAWPLYAEQRLNAV-----ILSEDLN-VALRPPEYENGLIKREEIA 420 (471)
Q Consensus 355 ~~~~~~~ItHgG~~s~~eal-----~~---GvP~l~~P~~~DQ~~na~-----~~~~~~G-~g~~~~~~~~~~~~~~~l~ 420 (471)
.++ ++|.--|--.+.+.+ .. |+|+-++ |.+..+. .+.+ -+ +=+.+..+.....-+..|+
T Consensus 106 ~ad--lViaat~d~~~n~~I~~~Ar~~f~~~i~VNvv----d~pel~~f~~Pa~~~~-g~~l~IaIST~Gksp~lA~~ir 178 (274)
T 1kyq_A 106 AWY--IIMTCIPDHPESARIYHLCKERFGKQQLVNVA----DKPDLCDFYFGANLEI-GDRLQILISTNGLSPRFGALVR 178 (274)
T ss_dssp CEE--EEEECCSCHHHHHHHHHHHHHHHCTTSEEEET----TCGGGBSEECCEEEEE-TTTEEEEEEESSSCHHHHHHHH
T ss_pred CeE--EEEEcCCChHHHHHHHHHHHHhcCCCcEEEEC----CCcccCeeEeeeEEEe-CCCEEEEEECCCCCcHHHHHHH
Confidence 555 777777765443333 22 5555222 4444443 3333 23 3233322211123357888
Q ss_pred HHHHHHh---CCCchHHHHHHHHHHHHHHHHHh
Q 012063 421 KVIKGLM---HGEDGVIIRDRMNRLKDAAAAAV 450 (471)
Q Consensus 421 ~~i~~~l---~~~~~~~~r~~a~~l~~~~~~~~ 450 (471)
+.|...+ .+++...+-+.+.++++.+++..
T Consensus 179 ~~ie~~l~~~p~~~~~~~~~~l~~~R~~ik~~~ 211 (274)
T 1kyq_A 179 DEIRNLFTQMGDLALEDAVVKLGELRRGIRLLA 211 (274)
T ss_dssp HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhC
Confidence 8888888 54455578888888888888753
No 120
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=34.93 E-value=1.8e+02 Score=24.69 Aligned_cols=110 Identities=8% Similarity=-0.071 Sum_probs=0.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCCcchhHHHHH
Q 012063 3 QVKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFEEDVKAEIQI 82 (471)
Q Consensus 3 ~~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~ 82 (471)
..+++|+++.++..+.+..++.=.+. .- +++|..+.+............. ++.+..++......
T Consensus 10 ~~~~ri~vl~SG~gsnl~all~~~~~--~~-~~eI~~Vis~~~a~~~~~A~~~-----gIp~~~~~~~~~~~-------- 73 (215)
T 3da8_A 10 SAPARLVVLASGTGSLLRSLLDAAVG--DY-PARVVAVGVDRECRAAEIAAEA-----SVPVFTVRLADHPS-------- 73 (215)
T ss_dssp CSSEEEEEEESSCCHHHHHHHHHSST--TC-SEEEEEEEESSCCHHHHHHHHT-----TCCEEECCGGGSSS--------
T ss_pred CCCcEEEEEEeCChHHHHHHHHHHhc--cC-CCeEEEEEeCCchHHHHHHHHc-----CCCEEEeCcccccc--------
Q ss_pred HHHHHHhHHHHHHHHHHhhcCCCccEEE-eCCCCccHHHHHHHhCCceEEEecc
Q 012063 83 VLAIKRSLSSVRDVFKSLVASTHLMALV-VDPFGTDVFDVAREFYVPSYLYFLT 135 (471)
Q Consensus 83 ~~~~~~~~~~l~~~l~~~~~~~~~D~VI-~D~~~~~~~~~A~~lgIP~v~~~~~ 135 (471)
.....+.+.+.+++.++|++| +.+.-.-...+-+.+.-.++-++++
T Consensus 74 -------r~~~d~~~~~~l~~~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 74 -------RDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp -------HHHHHHHHHHHHHTTCCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred -------hhhhhHHHHHHHHhhCCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
No 121
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=34.92 E-value=27 Score=27.67 Aligned_cols=32 Identities=25% Similarity=0.221 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeC
Q 012063 5 KHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVP 42 (471)
Q Consensus 5 ~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~ 42 (471)
+.||+++-. |++- ..+++.|.++ ||+|+++..
T Consensus 3 ~~~vlI~G~---G~vG--~~la~~L~~~-g~~V~vid~ 34 (153)
T 1id1_A 3 KDHFIVCGH---SILA--INTILQLNQR-GQNVTVISN 34 (153)
T ss_dssp CSCEEEECC---SHHH--HHHHHHHHHT-TCCEEEEEC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHC-CCCEEEEEC
Confidence 458888853 5554 7889999775 999999975
No 122
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=34.70 E-value=1.6e+02 Score=25.87 Aligned_cols=29 Identities=10% Similarity=0.169 Sum_probs=19.3
Q ss_pred CccEEEeCCCCcc----HHHHHHHhCCceEEEe
Q 012063 105 HLMALVVDPFGTD----VFDVAREFYVPSYLYF 133 (471)
Q Consensus 105 ~~D~VI~D~~~~~----~~~~A~~lgIP~v~~~ 133 (471)
++|.||.-+.... ....+...|||+|.+.
T Consensus 61 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 93 (305)
T 3g1w_A 61 NPAGIAISAIDPVELTDTINKAVDAGIPIVLFD 93 (305)
T ss_dssp CCSEEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred CCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEEC
Confidence 8999987654332 2345566899988754
No 123
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=34.63 E-value=93 Score=24.00 Aligned_cols=64 Identities=13% Similarity=-0.021 Sum_probs=39.1
Q ss_pred hCCceeeccccccchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Q 012063 376 HGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAA 448 (471)
Q Consensus 376 ~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~ 448 (471)
..+|+|++--..| ........+ .|+--.+.+- ++.++|..+|+.++.. ..+++..+++++...+
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~-~g~~~~l~kP----~~~~~L~~~i~~~~~~---~~~~~~~~~~~~~~~~ 137 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQ-DGAYDFIAKP----FAADRLVQSARRAEEK---RRLVMENRSLRRAAEA 137 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHH-TTCCEEEESS----CCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHh-cCCCeEEeCC----CCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 4788888754433 334445555 6764444332 7899999999999865 4444444444444443
No 124
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=33.55 E-value=1.8e+02 Score=27.04 Aligned_cols=40 Identities=8% Similarity=-0.034 Sum_probs=32.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCC
Q 012063 7 HVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPP 47 (471)
Q Consensus 7 ~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~ 47 (471)
-++++..|+.|-..=.++++..++.+ |..|.|++++....
T Consensus 76 li~I~G~pGsGKTtlal~la~~~~~~-g~~vlyi~~E~s~~ 115 (366)
T 1xp8_A 76 ITEIYGPESGGKTTLALAIVAQAQKA-GGTCAFIDAEHALD 115 (366)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHT-TCCEEEEESSCCCC
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHHC-CCeEEEEECCCChh
Confidence 35667789999999999999999775 99999999865433
No 125
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=33.46 E-value=24 Score=32.85 Aligned_cols=36 Identities=25% Similarity=0.272 Sum_probs=28.0
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeC
Q 012063 1 MAQVKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVP 42 (471)
Q Consensus 1 m~~~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~ 42 (471)
|.+.+|+|.++-.+..|. .+|..|++. ||+|++...
T Consensus 25 m~~~~mkI~VIGaG~mG~-----alA~~La~~-G~~V~l~~r 60 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGT-----ALALVLARK-GQKVRLWSY 60 (356)
T ss_dssp --CCCSCEEEECCSHHHH-----HHHHHHHTT-TCCEEEECS
T ss_pred ccccCCeEEEECccHHHH-----HHHHHHHHC-CCeEEEEeC
Confidence 555578999999888874 688999765 999999874
No 126
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=33.44 E-value=48 Score=26.80 Aligned_cols=41 Identities=15% Similarity=0.159 Sum_probs=31.8
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 012063 1 MAQVKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPT 43 (471)
Q Consensus 1 m~~~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~ 43 (471)
|+++|+-|++++ +..--..|.+-||..-+.- |++|+++.+-
T Consensus 2 m~~~kl~II~~s-G~~dka~~a~ilA~~AaA~-G~eV~iFfTf 42 (160)
T 3pnx_A 2 MENKKMNLLLFS-GDYDKALASLIIANAAREM-EIEVTIFCAF 42 (160)
T ss_dssp CTTCEEEEEECC-CCHHHHHHHHHHHHHHHHT-TCEEEEEECG
T ss_pred CCCCcEEEEEec-CCHHHHHHHHHHHHHHHHc-CCCEEEEEee
Confidence 666666665555 5677788999999999875 9999999864
No 127
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=32.95 E-value=43 Score=28.40 Aligned_cols=43 Identities=9% Similarity=-0.025 Sum_probs=30.4
Q ss_pred CCCCCcEEEEEcCCCccCHHH-HHHHHHHHHhCCCcEEEEEeCCCC
Q 012063 1 MAQVKHHVACMPSPGMGHLIP-HVELAKQLVLRHDISVTFLVPTIG 45 (471)
Q Consensus 1 m~~~~~~i~~~~~p~~GH~~P-~l~La~~L~~r~Gh~Vt~~~~~~~ 45 (471)
|.-+..||++.-.++ +...- ...|.+.|.++ |++|.++.++.-
T Consensus 1 m~l~~k~IllgiTGs-iaayk~~~~ll~~L~~~-g~eV~vv~T~~A 44 (207)
T 3mcu_A 1 MSLKGKRIGFGFTGS-HCTYEEVMPHLEKLIAE-GAEVRPVVSYTV 44 (207)
T ss_dssp -CCTTCEEEEEECSC-GGGGTTSHHHHHHHHHT-TCEEEEEECC--
T ss_pred CCCCCCEEEEEEECh-HHHHHHHHHHHHHHHhC-CCEEEEEEehHH
Confidence 443446787777776 44554 78999999775 999999987643
No 128
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=32.46 E-value=48 Score=28.11 Aligned_cols=41 Identities=17% Similarity=0.110 Sum_probs=30.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012063 3 QVKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTI 44 (471)
Q Consensus 3 ~~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~ 44 (471)
..+.||++.-.++.+=+. ...|.++|.+..|++|.++.++.
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~ 57 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTER 57 (206)
T ss_dssp CSSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTG
T ss_pred cCCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHh
Confidence 345688888888877554 58999999651499999999873
No 129
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=32.40 E-value=2.4e+02 Score=25.99 Aligned_cols=40 Identities=8% Similarity=-0.050 Sum_probs=32.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCC
Q 012063 7 HVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPP 47 (471)
Q Consensus 7 ~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~ 47 (471)
-++++-.|+.|=.+=+++++..++.. |..|.|+.++....
T Consensus 63 i~~I~GppGsGKSTLal~la~~~~~~-gg~VlyId~E~s~~ 102 (356)
T 3hr8_A 63 IVEIFGQESSGKTTLALHAIAEAQKM-GGVAAFIDAEHALD 102 (356)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHT-TCCEEEEESSCCCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhc-CCeEEEEecccccc
Confidence 35667778999999999999999765 99999998765443
No 130
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=30.81 E-value=52 Score=29.13 Aligned_cols=31 Identities=10% Similarity=-0.065 Sum_probs=23.8
Q ss_pred CccEEEeCCCCc------cHHHHHHHhCCceEEEecc
Q 012063 105 HLMALVVDPFGT------DVFDVAREFYVPSYLYFLT 135 (471)
Q Consensus 105 ~~D~VI~D~~~~------~~~~~A~~lgIP~v~~~~~ 135 (471)
+||+||+..... .+..+|..||+|.++....
T Consensus 112 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 112 APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 799999755442 4557999999999987653
No 131
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=30.79 E-value=59 Score=27.60 Aligned_cols=37 Identities=16% Similarity=0.076 Sum_probs=31.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012063 5 KHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTI 44 (471)
Q Consensus 5 ~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~ 44 (471)
+.||++.-.++.+-+. ...|.+.|.++ | +|.++.++.
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~-g-~V~vv~T~~ 55 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEW-A-EVRAVVTKS 55 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTT-S-EEEEEECTG
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcC-C-CEEEEEcch
Confidence 4689988889888776 89999999664 8 999998873
No 132
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=30.23 E-value=1.4e+02 Score=28.63 Aligned_cols=90 Identities=8% Similarity=-0.019 Sum_probs=50.0
Q ss_pred hhhcCCcccccccccCchh-----HHHHHhhCCceeeccccccchhhHHHH-----Hh-hhcceeecCCCCCCccCHHHH
Q 012063 351 EVLGHPSTGGFLTHCGWNS-----TLESIVHGVPLIAWPLYAEQRLNAVIL-----SE-DLNVALRPPEYENGLIKREEI 419 (471)
Q Consensus 351 ~~L~~~~~~~~ItHgG~~s-----~~eal~~GvP~l~~P~~~DQ~~na~~~-----~~-~~G~g~~~~~~~~~~~~~~~l 419 (471)
.-|..++ ++|.--|.-. ..+|-..|+|+-++ |.+..+... .+ .+-+|+.-..+. ..-+..|
T Consensus 68 ~~l~~~~--lVi~at~~~~~n~~i~~~a~~~~i~vn~~----d~~e~~~~~~pa~~~~~~l~iaIsT~Gks--p~la~~i 139 (457)
T 1pjq_A 68 TLLDSCW--LAIAATDDDTVNQRVSDAAESRRIFCNVV----DAPKAASFIMPSIIDRSPLMVAVSSGGTS--PVLARLL 139 (457)
T ss_dssp GGGTTCS--EEEECCSCHHHHHHHHHHHHHTTCEEEET----TCTTSSSEECCEEEEETTEEEEEECTTSC--HHHHHHH
T ss_pred cccCCcc--EEEEcCCCHHHHHHHHHHHHHcCCEEEEC----CCcccCceEeeeEEEeCCeEEEEECCCCC--hHHHHHH
Confidence 3355666 7877777653 34556678886332 333333222 12 123455522221 1226788
Q ss_pred HHHHHHHhCCCchHHHHHHHHHHHHHHHHH
Q 012063 420 AKVIKGLMHGEDGVIIRDRMNRLKDAAAAA 449 (471)
Q Consensus 420 ~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~ 449 (471)
++.|.+.+.. +...+.+.+.++++.+++.
T Consensus 140 r~~ie~~l~~-~~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 140 REKLESLLPQ-HLGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp HHHHHHHSCT-THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcch-hHHHHHHHHHHHHHHHHhh
Confidence 8888888854 3346667777777777653
No 133
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=30.16 E-value=66 Score=26.41 Aligned_cols=37 Identities=11% Similarity=-0.034 Sum_probs=29.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTI 44 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~ 44 (471)
.||++.-.++.|=+. ...|.+.|.+ .|++|.++.++.
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~-~g~~V~vv~T~~ 42 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKS-KFDEVNVIASTN 42 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTT-TCSEEEEEECTG
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHH-CCCEEEEEECcC
Confidence 478887778777664 8899999966 499999998773
No 134
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=29.84 E-value=55 Score=28.77 Aligned_cols=31 Identities=6% Similarity=-0.118 Sum_probs=23.5
Q ss_pred CccEEEeCCCCc------cHHHHHHHhCCceEEEecc
Q 012063 105 HLMALVVDPFGT------DVFDVAREFYVPSYLYFLT 135 (471)
Q Consensus 105 ~~D~VI~D~~~~------~~~~~A~~lgIP~v~~~~~ 135 (471)
+||+|++..... .+..+|..||+|.++....
T Consensus 116 ~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 116 KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 799999755332 4557999999999887643
No 135
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=29.80 E-value=23 Score=31.84 Aligned_cols=30 Identities=10% Similarity=-0.007 Sum_probs=24.8
Q ss_pred cCCcccccccccCchhHHHHHhh----CCceeeccc
Q 012063 354 GHPSTGGFLTHCGWNSTLESIVH----GVPLIAWPL 385 (471)
Q Consensus 354 ~~~~~~~~ItHgG~~s~~eal~~----GvP~l~~P~ 385 (471)
..++ ++|+=||-||+.+++.. ++|.+.++.
T Consensus 62 ~~~D--~vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 62 QQAD--LAVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHCS--EEEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cCCC--EEEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 3456 99999999999999853 789999873
No 136
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=29.75 E-value=84 Score=23.53 Aligned_cols=65 Identities=9% Similarity=0.082 Sum_probs=44.0
Q ss_pred hcCCcccccccccCchh---------HHHHHhhCCceeeccccccchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHH
Q 012063 353 LGHPSTGGFLTHCGWNS---------TLESIVHGVPLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVI 423 (471)
Q Consensus 353 L~~~~~~~~ItHgG~~s---------~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i 423 (471)
+..++ ++|--.|..| +..|...|+|+|++=..+.+.. -..+++ .+..+.- .+.+.|.++|
T Consensus 36 I~~~~--~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~~-P~~l~~-~a~~iV~-------Wn~~~I~~aI 104 (111)
T 1eiw_A 36 PEDAD--AVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLENV-PPELEA-VSSEVVG-------WNPHCIRDAL 104 (111)
T ss_dssp SSSCS--EEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSCC-CTTHHH-HCSEEEC-------SCHHHHHHHH
T ss_pred cccCC--EEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCcC-CHHHHh-hCceecc-------CCHHHHHHHH
Confidence 44666 7887888877 6678889999998755554411 112444 3444332 8899999999
Q ss_pred HHHhC
Q 012063 424 KGLMH 428 (471)
Q Consensus 424 ~~~l~ 428 (471)
+..++
T Consensus 105 ~~~~~ 109 (111)
T 1eiw_A 105 EDALD 109 (111)
T ss_dssp HHHHC
T ss_pred HhccC
Confidence 88764
No 137
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=29.75 E-value=56 Score=27.82 Aligned_cols=38 Identities=16% Similarity=-0.004 Sum_probs=33.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeC
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVP 42 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~ 42 (471)
.+.+|++.+.++-.|-....-++..|.. +|++|+++..
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~-~G~~Vi~LG~ 128 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGA-NGFQIVDLGV 128 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHH-TSCEEEECCS
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHH-CCCeEEEcCC
Confidence 3679999999999999999999999966 4999999864
No 138
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=29.71 E-value=88 Score=22.99 Aligned_cols=34 Identities=12% Similarity=0.110 Sum_probs=22.0
Q ss_pred cCCCccEEEeCCCCcc--HHHHHHHh-------CCceEEEecc
Q 012063 102 ASTHLMALVVDPFGTD--VFDVAREF-------YVPSYLYFLT 135 (471)
Q Consensus 102 ~~~~~D~VI~D~~~~~--~~~~A~~l-------gIP~v~~~~~ 135 (471)
++.+||+||.|..++. +..+.+.+ ++|.+++...
T Consensus 43 ~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 43 SEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp TTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred HhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 3458999999986643 44454443 5787766643
No 139
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=29.59 E-value=22 Score=32.22 Aligned_cols=36 Identities=22% Similarity=0.343 Sum_probs=26.0
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCC-----C-cEEEEEeC
Q 012063 1 MAQVKHHVACMPSPGMGHLIPHVELAKQLVLRH-----D-ISVTFLVP 42 (471)
Q Consensus 1 m~~~~~~i~~~~~p~~GH~~P~l~La~~L~~r~-----G-h~Vt~~~~ 42 (471)
|++.+|+|+++-.+..|. .+|..|++ . | |+|+++..
T Consensus 4 m~~~~m~I~iiG~G~mG~-----~~a~~L~~-~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGG-----YYGAMLAL-RAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHHH-----HHHHHHHH-HHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECcCHHHH-----HHHHHHHh-CccccCCCCCEEEEEc
Confidence 677778999999888884 55777754 5 8 99999863
No 140
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=29.48 E-value=48 Score=29.04 Aligned_cols=41 Identities=22% Similarity=0.289 Sum_probs=30.5
Q ss_pred CCCCCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 012063 1 MAQVKHHVACMPS--PGMGHLIPHVELAKQLVLRHDISVTFLVPT 43 (471)
Q Consensus 1 m~~~~~~i~~~~~--p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~ 43 (471)
|...+++++.+.. ++-|=.+=...||..|+ + |.+|.++-..
T Consensus 22 ~~~~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~-g~~VlliD~D 64 (267)
T 3k9g_A 22 MDNKKPKIITIASIKGGVGKSTSAIILATLLS-K-NNKVLLIDMD 64 (267)
T ss_dssp ----CCEEEEECCSSSSSCHHHHHHHHHHHHT-T-TSCEEEEEEC
T ss_pred CCCCCCeEEEEEeCCCCchHHHHHHHHHHHHH-C-CCCEEEEECC
Confidence 4455677766644 78899999999999997 6 9999998754
No 141
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=29.05 E-value=3e+02 Score=24.35 Aligned_cols=25 Identities=8% Similarity=-0.151 Sum_probs=18.3
Q ss_pred CCHHhHHHHHHHHHhCCCceEEEEe
Q 012063 280 LSYDQLEELALGLELSEQQFLWVVK 304 (471)
Q Consensus 280 ~~~~~~~~~~~al~~~~~~~~~~~~ 304 (471)
++.+...+++++|.+.+.+.|-...
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~ 47 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATS 47 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEcc
Confidence 5677778888888888877665443
No 142
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=29.04 E-value=1.2e+02 Score=25.24 Aligned_cols=138 Identities=14% Similarity=0.106 Sum_probs=0.0
Q ss_pred EEeCCCcCCCHHhHHHHHHHHHhCCCceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccC-----
Q 012063 272 VSFGSGGTLSYDQLEELALGLELSEQQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSW----- 346 (471)
Q Consensus 272 vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~----- 346 (471)
|-+|-.+........++++.|.+.+.++-.++..... .-+.+.-.+...+. ++..-|
T Consensus 11 IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T~~A~-----------------~fi~~~~~~~l~~~-v~~~~~~~~~~ 72 (194)
T 1p3y_1 11 LLIGICGSISSVGISSYLLYFKSFFKEIRVVMTKTAE-----------------DLIPAHTVSYFCDH-VYSEHGENGKR 72 (194)
T ss_dssp EEEEECSCGGGGGTHHHHHHHTTTSSEEEEEECHHHH-----------------HHSCHHHHGGGSSE-EECTTCSSSCC
T ss_pred EEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEchhHH-----------------HHHHHHHHHHhcCC-EeccccccCCC
Q ss_pred cchhhhhcCCcccccccccCchhHHHH-------------HhhCCceeecc----ccccc---hhhHHHHHhhhcceeec
Q 012063 347 APQVEVLGHPSTGGFLTHCGWNSTLES-------------IVHGVPLIAWP----LYAEQ---RLNAVILSEDLNVALRP 406 (471)
Q Consensus 347 ~pq~~~L~~~~~~~~ItHgG~~s~~ea-------------l~~GvP~l~~P----~~~DQ---~~na~~~~~~~G~g~~~ 406 (471)
+.+..+...++. ++|.-|=+||+... +..++|++++| ..... ..|-.++.+ .|+=+..
T Consensus 73 ~~hi~l~~~aD~-~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~iv~ 150 (194)
T 1p3y_1 73 HSHVEIGRWADI-YCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRK-DGHIVIE 150 (194)
T ss_dssp CCHHHHHHHCSE-EEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHH-HTCEECC
T ss_pred cCcccccccCCE-EEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHH-CCCEEEC
Q ss_pred CCCC-------------CCccCHHHHHHHHHHHhCC
Q 012063 407 PEYE-------------NGLIKREEIAKVIKGLMHG 429 (471)
Q Consensus 407 ~~~~-------------~~~~~~~~l~~~i~~~l~~ 429 (471)
.... +...+.++|.+.+.+.+.+
T Consensus 151 p~~g~~f~lacg~~g~~g~~~~~~~iv~~v~~~l~~ 186 (194)
T 1p3y_1 151 PVEIMAFEIATGTRKPNRGLITPDKALLAIEKGFKE 186 (194)
T ss_dssp CBCCC------------CBCCCHHHHHHHHHHHCC-
T ss_pred CCCCcccccccCCcCcCCCCCCHHHHHHHHHHHhcc
No 143
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=28.79 E-value=69 Score=26.88 Aligned_cols=36 Identities=11% Similarity=0.176 Sum_probs=29.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCC-CcEEEEEeCC
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRH-DISVTFLVPT 43 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~-Gh~Vt~~~~~ 43 (471)
|||++--.++.|-+. ...|.+.|. ++ |++|.++.++
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~-~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALR-EMPNVETHLVMSK 37 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHH-TCTTCEEEEEECH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHH-hccCCEEEEEECc
Confidence 478777778877766 899999995 46 9999999876
No 144
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=28.78 E-value=35 Score=30.72 Aligned_cols=35 Identities=17% Similarity=0.186 Sum_probs=26.9
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEe
Q 012063 1 MAQVKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLV 41 (471)
Q Consensus 1 m~~~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~ 41 (471)
|.....+|.++-.+..|+ .+|..|+++ ||+|+++.
T Consensus 11 ~~~~~~~I~VIG~G~mG~-----~iA~~la~~-G~~V~~~d 45 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGLMGA-----GIAQVAAAT-GHTVVLVD 45 (302)
T ss_dssp -CCCCCEEEEECCSHHHH-----HHHHHHHHT-TCEEEEEC
T ss_pred ccccCCEEEEECCCHHHH-----HHHHHHHhC-CCeEEEEE
Confidence 444456899999888886 578889875 99999875
No 145
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=28.62 E-value=55 Score=28.72 Aligned_cols=31 Identities=3% Similarity=-0.189 Sum_probs=23.5
Q ss_pred CccEEEeCCCCc------cHHHHHHHhCCceEEEecc
Q 012063 105 HLMALVVDPFGT------DVFDVAREFYVPSYLYFLT 135 (471)
Q Consensus 105 ~~D~VI~D~~~~------~~~~~A~~lgIP~v~~~~~ 135 (471)
+||+|++..... .+..+|..||+|.++....
T Consensus 113 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 149 (252)
T 1efp_B 113 GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASK 149 (252)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEEE
Confidence 799999755332 4557999999999887643
No 146
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=28.27 E-value=42 Score=29.92 Aligned_cols=32 Identities=25% Similarity=0.240 Sum_probs=23.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeC
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVP 42 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~ 42 (471)
|+|++. ++.|-+- -+|+++|.++ ||+|+.++-
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~-G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNAR-GHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHC-CCEEEEEEC
Confidence 566654 4556553 5688999886 999999874
No 147
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=27.92 E-value=2.7e+02 Score=23.41 Aligned_cols=107 Identities=7% Similarity=-0.092 Sum_probs=53.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCC-CcEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCCcchhHHHHHHH
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRH-DISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFEEDVKAEIQIVL 84 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ 84 (471)
++|+++.++..+ -+.+|.+++.+.. +|+|..+.+..... ....+.. ..++.+..++......
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~--~~~~~A~--~~gIp~~~~~~~~~~~---------- 63 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADA--FGLERAR--QAGIATHTLIASAFDS---------- 63 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTC--HHHHHHH--HTTCEEEECCGGGCSS----------
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCch--HHHHHHH--HcCCcEEEeCcccccc----------
Confidence 367777765543 4677777774321 48887776543222 1222222 2367777653221110
Q ss_pred HHHHhHHHHHHHHHHhhcCCCccEEEeCCCC-ccHHHHHHHhCCceEEEec
Q 012063 85 AIKRSLSSVRDVFKSLVASTHLMALVVDPFG-TDVFDVAREFYVPSYLYFL 134 (471)
Q Consensus 85 ~~~~~~~~l~~~l~~~~~~~~~D~VI~D~~~-~~~~~~A~~lgIP~v~~~~ 134 (471)
.+...+.+.+.+++.+||+||+=.++ .-...+-+.+...++-+++
T Consensus 64 -----r~~~~~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 109 (212)
T 1jkx_A 64 -----REAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHP 109 (212)
T ss_dssp -----HHHHHHHHHHHHGGGCCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred -----hhhccHHHHHHHHhcCCCEEEEeChhhhCCHHHHhhccCCEEEEcc
Confidence 01111122223344599999975543 3333445555556666654
No 148
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=26.78 E-value=24 Score=32.06 Aligned_cols=31 Identities=16% Similarity=0.100 Sum_probs=24.2
Q ss_pred hcCCcccccccccCchhHHHHHhh----CCceeeccc
Q 012063 353 LGHPSTGGFLTHCGWNSTLESIVH----GVPLIAWPL 385 (471)
Q Consensus 353 L~~~~~~~~ItHgG~~s~~eal~~----GvP~l~~P~ 385 (471)
...++ ++|+-||-||+.+++.. ++|++.++.
T Consensus 73 ~~~~d--~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 73 ADGCE--LVLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ---CC--CEEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred ccCCC--EEEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 34456 99999999999999865 889998874
No 149
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=26.43 E-value=43 Score=32.82 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPT 43 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~ 43 (471)
+|+||+++-.+..| +.+|+.|.+ .|++||++.+.
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~-~~~~VtLId~~ 74 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDT-KKYNVSIISPR 74 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCT-TTCEEEEEESS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhh-CCCcEEEECCC
Confidence 47899999876555 578999965 59999999764
No 150
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=26.35 E-value=1.6e+02 Score=27.37 Aligned_cols=33 Identities=9% Similarity=-0.114 Sum_probs=24.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeC
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVP 42 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~ 42 (471)
++++|+++..+.. .+.+++++.+ .|++|.++..
T Consensus 6 ~~~~ilI~g~g~~-----~~~~~~a~~~-~G~~~v~v~~ 38 (403)
T 4dim_A 6 DNKRLLILGAGRG-----QLGLYKAAKE-LGIHTIAGTM 38 (403)
T ss_dssp CCCEEEEECCCGG-----GHHHHHHHHH-HTCEEEEEEC
T ss_pred CCCEEEEECCcHh-----HHHHHHHHHH-CCCEEEEEcC
Confidence 3468888876653 3668899865 4999999965
No 151
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=26.32 E-value=95 Score=24.98 Aligned_cols=28 Identities=14% Similarity=0.248 Sum_probs=23.1
Q ss_pred EEEEEeCCCcCCCHHhHHHHHHHHHhCC
Q 012063 269 VLFVSFGSGGTLSYDQLEELALGLELSE 296 (471)
Q Consensus 269 ~i~vs~GS~~~~~~~~~~~~~~al~~~~ 296 (471)
.+|+++||........++..++.|+..+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 5899999987667777888888888764
No 152
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=26.20 E-value=75 Score=25.58 Aligned_cols=28 Identities=18% Similarity=0.207 Sum_probs=22.1
Q ss_pred EEEEEeCCCcCCCHHhHHHHHHHHHhCC
Q 012063 269 VLFVSFGSGGTLSYDQLEELALGLELSE 296 (471)
Q Consensus 269 ~i~vs~GS~~~~~~~~~~~~~~al~~~~ 296 (471)
.+|+++||........++..+++|+..+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 5899999986556667888888887764
No 153
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=26.15 E-value=41 Score=31.71 Aligned_cols=59 Identities=19% Similarity=0.294 Sum_probs=39.4
Q ss_pred hhhhhcCCcccccccccCchhHHHHHhh----CC-ceeeccccccchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHH
Q 012063 349 QVEVLGHPSTGGFLTHCGWNSTLESIVH----GV-PLIAWPLYAEQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVI 423 (471)
Q Consensus 349 q~~~L~~~~~~~~ItHgG~~s~~eal~~----Gv-P~l~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i 423 (471)
..++-..++ ++|+=||-||++.|+.. ++ |+|.+... . + |.. .+ +..+++.+++
T Consensus 108 ~~~~~~~~D--lVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G-----------~-l--GFL---t~---~~~~~~~~al 165 (388)
T 3afo_A 108 EQDIVNRTD--LLVTLGGDGTILHGVSMFGNTQVPPVLAFALG-----------T-L--GFL---SP---FDFKEHKKVF 165 (388)
T ss_dssp HHHHHHHCS--EEEEEESHHHHHHHHHTTTTSCCCCEEEEECS-----------S-C--CSS---CC---EEGGGHHHHH
T ss_pred hhhcccCCC--EEEEEeCcHHHHHHHHHhcccCCCeEEEEECC-----------C-c--ccC---Cc---CChHHHHHHH
Confidence 344445566 99999999999999654 56 78888532 1 1 211 11 4567788888
Q ss_pred HHHhCC
Q 012063 424 KGLMHG 429 (471)
Q Consensus 424 ~~~l~~ 429 (471)
++++++
T Consensus 166 ~~il~g 171 (388)
T 3afo_A 166 QEVISS 171 (388)
T ss_dssp HHHHTT
T ss_pred HHHhcC
Confidence 888765
No 154
>2q37_A OHCU decarboxylase; 2-OXO-4-hydroxy-4-carboxy-5-ureidoimidazoline, plant protein, lyase; HET: 3AL; 2.50A {Arabidopsis thaliana} SCOP: a.288.1.1
Probab=26.05 E-value=1.8e+02 Score=23.87 Aligned_cols=54 Identities=7% Similarity=-0.036 Sum_probs=39.3
Q ss_pred hhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 012063 390 RLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAA 447 (471)
Q Consensus 390 ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~ 447 (471)
..|+++-++ .|.=..+-.+. .+.++|.+.+++-|.|+.-.+.+..+.++.+..+
T Consensus 118 ~LN~~Ye~k-FGfpFVi~v~G---~s~~~IL~~l~~RL~N~~~~E~~~Al~Ev~kIa~ 171 (181)
T 2q37_A 118 EWNVLYKKK-FGFIFIICASG---RTHAEMLHALKERYENRPIVELEIAAMEQMKITE 171 (181)
T ss_dssp HHHHHHHHH-HSSCCCCCCSS---CCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCeEEEEeCC---CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 458888888 87776655444 6899999999999998655566666666665543
No 155
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=25.80 E-value=2.3e+02 Score=26.08 Aligned_cols=40 Identities=8% Similarity=0.018 Sum_probs=33.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCCCCC
Q 012063 7 HVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTIGPP 47 (471)
Q Consensus 7 ~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~~~~ 47 (471)
-++++..|+.|-..=.++++..++.+ |..|.|+.++...+
T Consensus 65 ii~I~G~pGsGKTtLal~la~~~~~~-g~~vlyid~E~s~~ 104 (356)
T 1u94_A 65 IVEIYGPESSGKTTLTLQVIAAAQRE-GKTCAFIDAEHALD 104 (356)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHT-TCCEEEEESSCCCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC-CCeEEEEeCCCCcc
Confidence 46777789999999999999999775 99999999864433
No 156
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=24.90 E-value=62 Score=24.56 Aligned_cols=32 Identities=16% Similarity=0.099 Sum_probs=23.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeC
Q 012063 5 KHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVP 42 (471)
Q Consensus 5 ~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~ 42 (471)
.|+|+++-. |.+- ..+++.|.++ ||+|+++..
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~-g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEK-GHDIVLIDI 35 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHT-TCEEEEEES
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhC-CCeEEEEEC
Confidence 478888843 5553 4678899775 999999864
No 157
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=24.88 E-value=81 Score=28.42 Aligned_cols=27 Identities=15% Similarity=-0.017 Sum_probs=23.4
Q ss_pred ccccccCchhHHHHHh------hCCceeecccc
Q 012063 360 GFLTHCGWNSTLESIV------HGVPLIAWPLY 386 (471)
Q Consensus 360 ~~ItHgG~~s~~eal~------~GvP~l~~P~~ 386 (471)
++|.-||-||+.|++. .++|+-++|..
T Consensus 66 ~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 66 LIIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp EEEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred EEEEEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 8999999999999864 57899999975
No 158
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=24.65 E-value=55 Score=28.04 Aligned_cols=38 Identities=13% Similarity=0.020 Sum_probs=32.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPTI 44 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~ 44 (471)
|+|++..-++-|=.+=...||..|+++ |++|.++-...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~-g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASD-YDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTT-CSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 468777778899999999999999875 99999997543
No 159
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=24.60 E-value=43 Score=25.88 Aligned_cols=36 Identities=17% Similarity=0.101 Sum_probs=24.0
Q ss_pred CCC-CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeC
Q 012063 1 MAQ-VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVP 42 (471)
Q Consensus 1 m~~-~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~ 42 (471)
|.. .+.||+++-. |.+ -..+++.|.++ ||+|+++..
T Consensus 1 m~~~~~~~v~I~G~---G~i--G~~la~~L~~~-g~~V~~id~ 37 (141)
T 3llv_A 1 MTENGRYEYIVIGS---EAA--GVGLVRELTAA-GKKVLAVDK 37 (141)
T ss_dssp -----CCSEEEECC---SHH--HHHHHHHHHHT-TCCEEEEES
T ss_pred CCCCCCCEEEEECC---CHH--HHHHHHHHHHC-CCeEEEEEC
Confidence 543 3458888865 443 46789999875 999999864
No 160
>2o8i_A AGR_C_4230P, hypothetical protein ATU2327; agrobacterium tumefaciens STR. C58, structural GENO PSI-2, protein structure initiative; 2.60A {Agrobacterium tumefaciens str} SCOP: a.288.1.1
Probab=24.48 E-value=2.1e+02 Score=23.10 Aligned_cols=54 Identities=9% Similarity=0.129 Sum_probs=40.2
Q ss_pred hhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 012063 390 RLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAA 447 (471)
Q Consensus 390 ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~ 447 (471)
..|+++-++ .|.=..+--+. .+.++|.+.+++-|.|+.-.+.+..+.++.+..+
T Consensus 102 ~lN~~Ye~k-FGfpFvi~v~g---~~~~~Il~~l~~Rl~nd~~~E~~~a~~e~~kIa~ 155 (165)
T 2o8i_A 102 QLNSAYTEK-FGFPFIIAVKG---LNRHDILSAFDTRIDNNAAQEFATATGQVEKIAW 155 (165)
T ss_dssp HHHHHHHHH-HSSCCCCCCTT---CCHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCeeEeeeCC---CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 458888888 87776655444 6889999999999998766667777777666543
No 161
>3o7i_A OHCU decarboxylase; lyase; 1.50A {Klebsiella pneumoniae subsp} PDB: 3o7h_A 3o7j_A* 3o7k_A
Probab=24.41 E-value=2.1e+02 Score=23.74 Aligned_cols=55 Identities=11% Similarity=0.102 Sum_probs=41.0
Q ss_pred chhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 012063 389 QRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAA 447 (471)
Q Consensus 389 Q~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~ 447 (471)
+..|+++-++ .|.-..+-.+. .+.++|.+.+++-|.|+.-.+.+..+.++.+..+
T Consensus 126 ~~LN~~Ye~k-FGfpFVi~v~G---~s~~~IL~~l~~Rl~nd~e~E~~~Al~Ev~kIa~ 180 (189)
T 3o7i_A 126 REGNARYEAR-FGRVFLIRAKG---RSGEEILQALTRRLQHTADEEVAEALAQLREITM 180 (189)
T ss_dssp HHHHHHHHHH-HSSCCCCCCTT---CCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-CCCceEEecCC---CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 4568888888 88776665544 6899999999999998665667777776666543
No 162
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=24.25 E-value=85 Score=25.25 Aligned_cols=28 Identities=18% Similarity=0.207 Sum_probs=21.1
Q ss_pred EEEEEeCCCcCCCHHhHHHHHHHHHhCC
Q 012063 269 VLFVSFGSGGTLSYDQLEELALGLELSE 296 (471)
Q Consensus 269 ~i~vs~GS~~~~~~~~~~~~~~al~~~~ 296 (471)
+.|+++||........++..+..|....
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 5799999986555566777888887654
No 163
>3ci9_A Heat shock factor-binding protein 1; triple helix, nucleus, transcription; 1.80A {Homo sapiens}
Probab=24.08 E-value=61 Score=20.16 Aligned_cols=42 Identities=17% Similarity=0.394 Sum_probs=29.8
Q ss_pred CHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHH
Q 012063 415 KREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLS 461 (471)
Q Consensus 415 ~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~ 461 (471)
+..+|...|..+|. .+..+-..+...+-.-+++-|+.-+.+|
T Consensus 3 ~~~dLt~~vq~LL~-----qmq~kFq~mS~~I~~riDdM~~RIDdLE 44 (48)
T 3ci9_A 3 TVQDLTSVVQTLLQ-----QMQDKFQTISDQIIGRIDDMSSRIDDLE 44 (48)
T ss_dssp CHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 68899999999994 5777777777777665555555443333
No 164
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=23.69 E-value=99 Score=23.85 Aligned_cols=28 Identities=4% Similarity=-0.007 Sum_probs=22.1
Q ss_pred CccCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 012063 15 GMGHLIPHVELAKQLVLRHDISVTFLVPT 43 (471)
Q Consensus 15 ~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~ 43 (471)
........+.+|...++. ||+|+++-+.
T Consensus 28 ~~~~~~~al~lA~~A~a~-g~eV~vFf~~ 55 (134)
T 3mc3_A 28 DLDRTYAPLFMASISASM-EYETSVFFMI 55 (134)
T ss_dssp GTHHHHHHHHHHHHHHHT-TCEEEEEECT
T ss_pred CHHHHHHHHHHHHHHHHC-CCCEEEEEEe
Confidence 456777888899888775 9999988654
No 165
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=23.58 E-value=2.9e+02 Score=22.23 Aligned_cols=141 Identities=14% Similarity=0.192 Sum_probs=72.2
Q ss_pred EEEEEeCCCcCCCHHhHHHHHHHHHhCCCceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCcc
Q 012063 269 VLFVSFGSGGTLSYDQLEELALGLELSEQQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWAP 348 (471)
Q Consensus 269 ~i~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p 348 (471)
.|-|-.||.. +-+..++....|+..+..+-..+-+... .|+.+. +|+.
T Consensus 5 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR-------------------~p~~~~-----------~~~~ 52 (163)
T 3ors_A 5 KVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSAHR-------------------TPKMMV-----------QFAS 52 (163)
T ss_dssp CEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------SHHHHH-----------HHHH
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECCcC-------------------CHHHHH-----------HHHH
Confidence 4566677754 3455678888888888765444433322 444332 2221
Q ss_pred hhhhhcCCcccccccccCch----hHHHHHhhCCceeeccccccch--hhHH-HHHh-hhcc--eeecCCCCCCccCHHH
Q 012063 349 QVEVLGHPSTGGFLTHCGWN----STLESIVHGVPLIAWPLYAEQR--LNAV-ILSE-DLNV--ALRPPEYENGLIKREE 418 (471)
Q Consensus 349 q~~~L~~~~~~~~ItHgG~~----s~~eal~~GvP~l~~P~~~DQ~--~na~-~~~~-~~G~--g~~~~~~~~~~~~~~~ 418 (471)
+.. -...+ +||.=.|.. ++..++ .-+|+|.+|...... ..+. -+.+ --|+ +.. ...+.+..++.-
T Consensus 53 ~a~-~~g~~--ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV-~I~~a~~~nAa~ 127 (163)
T 3ors_A 53 EAR-ERGIN--IIIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATT-AIGAAGAKNAGI 127 (163)
T ss_dssp HTT-TTTCC--EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEEC-CSTHHHHHHHHH
T ss_pred HHH-hCCCc--EEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEE-EcCCcccHHHHH
Confidence 111 01223 677665533 444443 568999999865421 1111 1122 0243 222 111001245666
Q ss_pred HHHHHHHHhCCCchHHHHHHHHHHHHHHHHHh
Q 012063 419 IAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAV 450 (471)
Q Consensus 419 l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~ 450 (471)
++..|-.+ .| +.++++.+..++..++.+
T Consensus 128 lAa~Il~~-~d---~~l~~kl~~~r~~~~~~v 155 (163)
T 3ors_A 128 LAARMLSI-QN---PSLVEKLNQYESSLIQKV 155 (163)
T ss_dssp HHHHHHHT-TC---THHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhC-CC---HHHHHHHHHHHHHHHHHH
Confidence 66666433 45 678888888887776643
No 166
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=23.53 E-value=1.2e+02 Score=27.73 Aligned_cols=29 Identities=3% Similarity=-0.018 Sum_probs=22.8
Q ss_pred CCCHHhHHHHHHHHHhCCCceEEEEecCC
Q 012063 279 TLSYDQLEELALGLELSEQQFLWVVKSPD 307 (471)
Q Consensus 279 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~ 307 (471)
..+.+..+.+.+++.....+.||.+.++.
T Consensus 61 g~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~ 89 (331)
T 4e5s_A 61 SSISSRVQDLHEAFRDPNVKAILTTLGGY 89 (331)
T ss_dssp CCHHHHHHHHHHHHHCTTEEEEEESCCCS
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEccccc
Confidence 34566788899999988888999887764
No 167
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=23.46 E-value=3.5e+02 Score=23.21 Aligned_cols=29 Identities=7% Similarity=-0.057 Sum_probs=18.7
Q ss_pred CccEEEeCCCCc----cHHHHHHHhCCceEEEe
Q 012063 105 HLMALVVDPFGT----DVFDVAREFYVPSYLYF 133 (471)
Q Consensus 105 ~~D~VI~D~~~~----~~~~~A~~lgIP~v~~~ 133 (471)
++|.||..+... .....+...|||+|.+.
T Consensus 61 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 93 (291)
T 3l49_A 61 KPDAIIEQLGNLDVLNPWLQKINDAGIPLFTVD 93 (291)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHHTTCCEEEES
T ss_pred CCCEEEEeCCChhhhHHHHHHHHHCCCcEEEec
Confidence 799999765431 12234566799987754
No 168
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=23.39 E-value=1.8e+02 Score=24.02 Aligned_cols=44 Identities=11% Similarity=0.151 Sum_probs=28.9
Q ss_pred eeccCcch-hhhhcCCcccccccccCchhHHHH---H------hhCCceeeccc
Q 012063 342 VVPSWAPQ-VEVLGHPSTGGFLTHCGWNSTLES---I------VHGVPLIAWPL 385 (471)
Q Consensus 342 ~v~~~~pq-~~~L~~~~~~~~ItHgG~~s~~ea---l------~~GvP~l~~P~ 385 (471)
++..+.+. ..++..-+..+++--||.||+-|. + .+++|++++-.
T Consensus 82 ~~~~~~~~Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 82 IEVNGMHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp EEESHHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred ccCCCHHHHHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 33445553 444444444578888999998775 4 37899999854
No 169
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=23.30 E-value=92 Score=25.13 Aligned_cols=28 Identities=18% Similarity=0.102 Sum_probs=21.9
Q ss_pred EEEEEeCCCcCCCHHhHHHHHHHHHhCC
Q 012063 269 VLFVSFGSGGTLSYDQLEELALGLELSE 296 (471)
Q Consensus 269 ~i~vs~GS~~~~~~~~~~~~~~al~~~~ 296 (471)
.+|+++||........++..++.|+..+
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~~ 33 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEYD 33 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 6999999986555666788888887754
No 170
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=23.16 E-value=92 Score=25.10 Aligned_cols=28 Identities=14% Similarity=0.224 Sum_probs=22.0
Q ss_pred EEEEEeCCCcCCCHHhHHHHHHHHHhCC
Q 012063 269 VLFVSFGSGGTLSYDQLEELALGLELSE 296 (471)
Q Consensus 269 ~i~vs~GS~~~~~~~~~~~~~~al~~~~ 296 (471)
.+|+++||........++..++.|+..+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 5899999987556667788888888764
No 171
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=23.13 E-value=2.3e+02 Score=23.12 Aligned_cols=112 Identities=13% Similarity=0.144 Sum_probs=60.3
Q ss_pred EEEEEeCCCcCCCHHhHHHHHHHHHhCCCceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeee---cc
Q 012063 269 VLFVSFGSGGTLSYDQLEELALGLELSEQQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVV---PS 345 (471)
Q Consensus 269 ~i~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v---~~ 345 (471)
+++.--|+.... ...++++.|.+.+.++-.++..... .-+.+...+...+ .++. ..
T Consensus 8 IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~A~-----------------~fi~~~~l~~l~~-~v~~~~~~~ 66 (175)
T 3qjg_A 8 VLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTNGR-----------------KFINGEILKQFCD-NYYDEFEDP 66 (175)
T ss_dssp EEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTGGG-----------------GGSCHHHHHHHCS-CEECTTTCT
T ss_pred EEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcCHH-----------------HHhhHHHHHHhcC-CEEecCCCC
Confidence 444444554432 3556777787777776666654322 1122222222222 2322 13
Q ss_pred CcchhhhhcCCcccccccccCchhHH-------------HHHhhCCceeeccccc----cc---hhhHHHHHhhhcce
Q 012063 346 WAPQVEVLGHPSTGGFLTHCGWNSTL-------------ESIVHGVPLIAWPLYA----EQ---RLNAVILSEDLNVA 403 (471)
Q Consensus 346 ~~pq~~~L~~~~~~~~ItHgG~~s~~-------------eal~~GvP~l~~P~~~----DQ---~~na~~~~~~~G~g 403 (471)
|+++..+-..++. ++|--|=+||+. -++..++|++++|-.. .. ..|-.++.+ .|+=
T Consensus 67 ~~~hi~l~~~aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~ 142 (175)
T 3qjg_A 67 FLNHVDIANKHDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKD-YGVS 142 (175)
T ss_dssp TCCHHHHHHTCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHH-TTCE
T ss_pred ccccccccchhCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHH-CCCE
Confidence 4566665444552 666666666543 3577899999999533 22 346666777 6754
No 172
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=23.12 E-value=3.4e+02 Score=22.91 Aligned_cols=35 Identities=23% Similarity=0.166 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 012063 5 KHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPT 43 (471)
Q Consensus 5 ~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~ 43 (471)
+-++++++..+.| =-.++|++|+++ |++|.++...
T Consensus 6 ~~k~vlITGas~g---IG~~~a~~l~~~-G~~v~~~~~~ 40 (255)
T 3icc_A 6 KGKVALVTGASRG---IGRAIAKRLAND-GALVAIHYGN 40 (255)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHT-TCEEEEEESS
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHC-CCeEEEEeCC
Confidence 3467777766554 246899999886 9999887543
No 173
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=22.88 E-value=94 Score=24.75 Aligned_cols=29 Identities=21% Similarity=0.129 Sum_probs=21.5
Q ss_pred ccEEEEEeCCCcCCCHHhHHHHHHHHHhC
Q 012063 267 GSVLFVSFGSGGTLSYDQLEELALGLELS 295 (471)
Q Consensus 267 ~~~i~vs~GS~~~~~~~~~~~~~~al~~~ 295 (471)
..+|+|+-||........+..+++.++..
T Consensus 25 ~avlLv~HGS~~p~~~~~~~~la~~l~~~ 53 (156)
T 1tjn_A 25 RGLVIVGHGSQLNHYREVMELHRKRIEES 53 (156)
T ss_dssp EEEEEEECCTTSTTHHHHHHHHHHHHHHH
T ss_pred cCEEEEECCCCCHHHHHHHHHHHHHHHhh
Confidence 46999999997544455677888888654
No 174
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=22.62 E-value=4.2e+02 Score=23.75 Aligned_cols=107 Identities=13% Similarity=0.070 Sum_probs=0.0
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCC---cEEEEEeCCCCCCchhhhhhhccCCCCeEEEEcCCCCCCcchhH
Q 012063 2 AQVKHHVACMPSPGMGHLIPHVELAKQLVLRHD---ISVTFLVPTIGPPSKAITSVLQGLPEHINHVLLPPVNFEEDVKA 78 (471)
Q Consensus 2 ~~~~~~i~~~~~p~~GH~~P~l~La~~L~~r~G---h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 78 (471)
...++||+++.++. || -+.+|..+. +. | .+|..+.+............ +++++.+|......
T Consensus 102 ~~~~~ri~vl~Sg~-g~--nl~~ll~~~-~~-g~l~~~I~~Visn~~~~~~~A~~~------gIp~~~~~~~~~~r---- 166 (302)
T 3o1l_A 102 SAQKKRVVLMASRE-SH--CLADLLHRW-HS-DELDCDIACVISNHQDLRSMVEWH------DIPYYHVPVDPKDK---- 166 (302)
T ss_dssp TTSCCEEEEEECSC-CH--HHHHHHHHH-HT-TCSCSEEEEEEESSSTTHHHHHTT------TCCEEECCCCSSCC----
T ss_pred cCCCcEEEEEEeCC-ch--hHHHHHHHH-HC-CCCCcEEEEEEECcHHHHHHHHHc------CCCEEEcCCCcCCH----
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhhcCCCccEEE-eCCCCccHHHHHHHhCCceEEEecc
Q 012063 79 EIQIVLAIKRSLSSVRDVFKSLVASTHLMALV-VDPFGTDVFDVAREFYVPSYLYFLT 135 (471)
Q Consensus 79 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~D~VI-~D~~~~~~~~~A~~lgIP~v~~~~~ 135 (471)
....+.+.+++++.++|+|| +.+.-.-...+-+.+.-.++-++++
T Consensus 167 ------------~~~~~~~~~~l~~~~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 167 ------------EPAFAEVSRLVGHHQADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp ------------HHHHHHHHHHHHHTTCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred ------------HHHHHHHHHHHHHhCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
No 175
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=22.57 E-value=79 Score=28.96 Aligned_cols=27 Identities=15% Similarity=0.049 Sum_probs=23.0
Q ss_pred ccccccCchhHHHHHh------hCCceeecccc
Q 012063 360 GFLTHCGWNSTLESIV------HGVPLIAWPLY 386 (471)
Q Consensus 360 ~~ItHgG~~s~~eal~------~GvP~l~~P~~ 386 (471)
++|.=||-||+.|++. .++|+.++|..
T Consensus 83 ~vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~G 115 (337)
T 2qv7_A 83 VLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMG 115 (337)
T ss_dssp EEEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred EEEEEcCchHHHHHHHHHHhCCCCCcEEEecCC
Confidence 8999999999999864 46799999975
No 176
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=22.41 E-value=1.9e+02 Score=24.49 Aligned_cols=44 Identities=14% Similarity=0.036 Sum_probs=29.3
Q ss_pred eeccCcch-hhhhcCCcccccccccCchhHHHHHh---------hCCceeeccc
Q 012063 342 VVPSWAPQ-VEVLGHPSTGGFLTHCGWNSTLESIV---------HGVPLIAWPL 385 (471)
Q Consensus 342 ~v~~~~pq-~~~L~~~~~~~~ItHgG~~s~~eal~---------~GvP~l~~P~ 385 (471)
.+....++ ..++..-+..+++--||.||+-|... +++|++++-.
T Consensus 94 ~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 94 RAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 34455553 44444444447778899999988763 4899998764
No 177
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=22.29 E-value=49 Score=29.78 Aligned_cols=32 Identities=19% Similarity=0.092 Sum_probs=25.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEe
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLV 41 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~ 41 (471)
.+++|.++-.+..|. .+|+.|++. ||+|+++.
T Consensus 6 ~~~~I~iIG~G~mG~-----~~a~~l~~~-G~~V~~~d 37 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGM-----GAARSCLRA-GLSTWGAD 37 (303)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHHHT-TCEEEEEC
T ss_pred CCCeEEEECCCHHHH-----HHHHHHHHC-CCeEEEEE
Confidence 467999998877774 678999875 99999885
No 178
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=22.22 E-value=1.5e+02 Score=18.49 Aligned_cols=55 Identities=11% Similarity=0.138 Sum_probs=33.8
Q ss_pred CCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHh
Q 012063 407 PEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVSDGGSSTKTLSQLVHKWKN 469 (471)
Q Consensus 407 ~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 469 (471)
+...+|.++.+++..+++.+-. .+ ....+...+.. .+..|+..-+.++|+.-+.+
T Consensus 10 D~d~~G~i~~~e~~~~l~~~~~-----~~--~~~~~~~~~~~-~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 10 DVNGDGAVSYEEVKAFVSKKRA-----IK--NEQLLQLIFKS-IDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp CTTCSSSCCHHHHHHHHHHHHH-----HH--HHHHHHHHHHH-HCTTCSSSCCHHHHHHHHTC
T ss_pred CCCCCCcccHHHHHHHHHHccC-----CC--cHHHHHHHHHH-HCCCCCCCCCHHHHHHHHHh
Confidence 3344678999999999977631 22 12344445554 34556656777888776654
No 179
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=22.07 E-value=87 Score=24.60 Aligned_cols=33 Identities=12% Similarity=0.041 Sum_probs=24.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeC
Q 012063 4 VKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVP 42 (471)
Q Consensus 4 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~ 42 (471)
..++|+++-.+..| ..+++.|.++ |++|+++..
T Consensus 18 ~~~~v~IiG~G~iG-----~~la~~L~~~-g~~V~vid~ 50 (155)
T 2g1u_A 18 KSKYIVIFGCGRLG-----SLIANLASSS-GHSVVVVDK 50 (155)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEEES
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHhC-CCeEEEEEC
Confidence 35689888654444 5578888765 999999874
No 180
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=22.06 E-value=68 Score=29.98 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=27.2
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEe
Q 012063 1 MAQVKHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLV 41 (471)
Q Consensus 1 m~~~~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~ 41 (471)
|.+.+.+|+++-.+-.| +.+|..|+++ |++|+++-
T Consensus 1 M~~~~~~V~IVGaG~aG-----l~~A~~L~~~-G~~v~v~E 35 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISG-----LTAALMLRDA-GVDVDVYE 35 (397)
T ss_dssp -CCCCSEEEEECCSHHH-----HHHHHHHHHT-TCEEEEEC
T ss_pred CCCCCCcEEEECCCHHH-----HHHHHHHHhC-CCCEEEEe
Confidence 77777899998866444 7889999775 99999985
No 181
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=22.02 E-value=5.9e+02 Score=26.67 Aligned_cols=83 Identities=12% Similarity=0.056 Sum_probs=48.4
Q ss_pred ccccccCchhHHHHHhhC-C--cee--eccccccchhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHH
Q 012063 360 GFLTHCGWNSTLESIVHG-V--PLI--AWPLYAEQRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVI 434 (471)
Q Consensus 360 ~~ItHgG~~s~~eal~~G-v--P~l--~~P~~~DQ~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 434 (471)
+|+.||--+.+.|.++-. . |+- .+|-++.--.-...++. .. ++++.|.+++.+++....+..
T Consensus 726 i~~~gGlgsaV~ell~~r~~~~~l~v~G~~d~G~tgtp~eLl~~----------~g---ld~~~Iv~~a~~~l~~~~~~~ 792 (845)
T 3ahc_A 726 LFAYHSYAQDVRGLIYDRPNHDNFHVVGYKEQGSTTTPFDMVRV----------ND---MDRYALQAAALKLIDADKYAD 792 (845)
T ss_dssp EEEESSCHHHHHHHTTTSTTGGGEEEECCCSCCCSCCHHHHHHT----------TT---CSHHHHHHHHHHHHHTTTTHH
T ss_pred eeeecCcHHHHHHHHHhCCCCceEEEEeccCCCCCCCHHHHHHH----------hC---cCHHHHHHHHHHHcchhhHHH
Confidence 455666666667766655 2 343 34333321111222222 22 889999999988887545667
Q ss_pred HHHHHHHHHHHHHHHhhcCCC
Q 012063 435 IRDRMNRLKDAAAAAVSDGGS 455 (471)
Q Consensus 435 ~r~~a~~l~~~~~~~~~~~g~ 455 (471)
+++..+....+.++++.+.|-
T Consensus 793 ~~~~~~~~~~~~~~~~~~~g~ 813 (845)
T 3ahc_A 793 KIDELNAFRKKAFQFAVDNGY 813 (845)
T ss_dssp HHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHHhCC
Confidence 777777777776666655443
No 182
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=21.98 E-value=3.8e+02 Score=23.04 Aligned_cols=37 Identities=5% Similarity=0.014 Sum_probs=25.6
Q ss_pred cEEEEEcCCCccCH-HHHHHHHHHHHhCCCcEEEEEeCC
Q 012063 6 HHVACMPSPGMGHL-IPHVELAKQLVLRHDISVTFLVPT 43 (471)
Q Consensus 6 ~~i~~~~~p~~GH~-~P~l~La~~L~~r~Gh~Vt~~~~~ 43 (471)
|||+++-.-+.-++ .-+...++.++. -|.+|.+++.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~-p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAA-PGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCC-TTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcC-CCCEEEEEeCC
Confidence 67877776665555 456668888854 48888887754
No 183
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=21.95 E-value=61 Score=30.17 Aligned_cols=30 Identities=30% Similarity=0.237 Sum_probs=24.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEE
Q 012063 5 KHHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFL 40 (471)
Q Consensus 5 ~~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~ 40 (471)
.|||+++-.+-.| +.+|..|+++ ||+|+++
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~~-G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRKH-GIKVTIY 30 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEE
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhC-CCCEEEE
Confidence 3788888766555 7889999765 9999998
No 184
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=21.62 E-value=82 Score=28.93 Aligned_cols=29 Identities=7% Similarity=0.071 Sum_probs=19.6
Q ss_pred CccEEEeCCCCccHH-HHHHHhCCceEEEe
Q 012063 105 HLMALVVDPFGTDVF-DVAREFYVPSYLYF 133 (471)
Q Consensus 105 ~~D~VI~D~~~~~~~-~~A~~lgIP~v~~~ 133 (471)
+||+||......... .+.+.+|||++.+.
T Consensus 96 ~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 96 QPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp CCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred CCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 899999765322222 35677899988764
No 185
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=21.57 E-value=1.4e+02 Score=27.57 Aligned_cols=26 Identities=31% Similarity=0.549 Sum_probs=20.6
Q ss_pred CCcccccccccCchhH---HHHHhhCCceee
Q 012063 355 HPSTGGFLTHCGWNST---LESIVHGVPLIA 382 (471)
Q Consensus 355 ~~~~~~~ItHgG~~s~---~eal~~GvP~l~ 382 (471)
+++ ++|++||.-+. ..|-..|+|.++
T Consensus 92 ~PD--vVi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 92 RPV--CVLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp CCS--EEEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred CCC--EEEEcCCcchHHHHHHHHHcCCCEEE
Confidence 466 99999998765 556778999986
No 186
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=21.38 E-value=3.4e+02 Score=22.26 Aligned_cols=142 Identities=16% Similarity=0.177 Sum_probs=75.4
Q ss_pred cEEEEEeCCCcCCCHHhHHHHHHHHHhCCCceEEEEecCCCCCCCCccccCCCCCCCCCCCChhhHHhhcCCCeeeccCc
Q 012063 268 SVLFVSFGSGGTLSYDQLEELALGLELSEQQFLWVVKSPDDKSASGSFFDVHSKTDPFGFLPTGFLDRTKEQGLVVPSWA 347 (471)
Q Consensus 268 ~~i~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~ 347 (471)
|.|-|-.||.. +-+..++....|+..+..+-..+-+... .|+.+. +|+
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR-------------------~p~~l~-----------~~~ 61 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSAHR-------------------TPDRMF-----------EYA 61 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT-------------------CHHHHH-----------HHH
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcccC-------------------CHHHHH-----------HHH
Confidence 46777788855 4455678888888888775444433322 444332 222
Q ss_pred chhhhhcCCcccccccccCch----hHHHHHhhCCceeecccccc--chhhHH-HHHhhh--cceeecCCCCCCccCHHH
Q 012063 348 PQVEVLGHPSTGGFLTHCGWN----STLESIVHGVPLIAWPLYAE--QRLNAV-ILSEDL--NVALRPPEYENGLIKREE 418 (471)
Q Consensus 348 pq~~~L~~~~~~~~ItHgG~~----s~~eal~~GvP~l~~P~~~D--Q~~na~-~~~~~~--G~g~~~~~~~~~~~~~~~ 418 (471)
.+.+ =...+ +||.=.|.- ++..++ .-+|+|.+|.... ....+- -+.+ - |+.+..-.- ++..++.-
T Consensus 62 ~~a~-~~g~~--ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~I-d~~~nAa~ 135 (183)
T 1o4v_A 62 KNAE-ERGIE--VIIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAI-NNAKNAGI 135 (183)
T ss_dssp HHTT-TTTCC--EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCT-TCHHHHHH
T ss_pred HHHH-hCCCc--EEEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEec-CCchHHHH
Confidence 1111 01122 566655532 444444 6789999998652 222221 1233 3 533221100 12366777
Q ss_pred HHHHHHHHhCCCchHHHHHHHHHHHHHHHHHhh
Q 012063 419 IAKVIKGLMHGEDGVIIRDRMNRLKDAAAAAVS 451 (471)
Q Consensus 419 l~~~i~~~l~~~~~~~~r~~a~~l~~~~~~~~~ 451 (471)
++..|. -+.| +.++++.+..++...+.+.
T Consensus 136 lAaqIl-a~~d---~~l~~kL~~~r~~~~~~v~ 164 (183)
T 1o4v_A 136 LAASIL-GIKY---PEIARKVKEYKERMKREVL 164 (183)
T ss_dssp HHHHHH-HTTC---HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-hcCC---HHHHHHHHHHHHHHHHHHH
Confidence 776665 3456 7788888877777666443
No 187
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=21.38 E-value=1.2e+02 Score=25.63 Aligned_cols=42 Identities=12% Similarity=0.188 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcCC---CccEEEeCCCCccHHHHHHHhCCceEEE
Q 012063 91 SSVRDVFKSLVAST---HLMALVVDPFGTDVFDVAREFYVPSYLY 132 (471)
Q Consensus 91 ~~l~~~l~~~~~~~---~~D~VI~D~~~~~~~~~A~~lgIP~v~~ 132 (471)
..++.+++.+.+.. ++-+||+|.-...+...|+++|||++.+
T Consensus 19 snl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~ 63 (209)
T 4ds3_A 19 SNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVF 63 (209)
T ss_dssp HHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEe
No 188
>2o70_A OHCU decarboxylase; URIC acid, decarboxylation, 5-hydroxyisourate, allantoin, lyase; 1.80A {Danio rerio} SCOP: a.288.1.1 PDB: 2o73_A* 2o74_A*
Probab=21.22 E-value=2e+02 Score=23.43 Aligned_cols=55 Identities=9% Similarity=0.115 Sum_probs=41.3
Q ss_pred chhhHHHHHhhhcceeecCCCCCCccCHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 012063 389 QRLNAVILSEDLNVALRPPEYENGLIKREEIAKVIKGLMHGEDGVIIRDRMNRLKDAAA 447 (471)
Q Consensus 389 Q~~na~~~~~~~G~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~r~~a~~l~~~~~ 447 (471)
+..|+++-++ .|.=..+--+. .+.++|.+.+++-|.|+.-.+.+..+.++.+..+
T Consensus 105 ~~lN~~Y~~k-FGfpFvi~v~g---~s~~~IL~~l~~Rl~n~~~~E~~~a~~ev~kIa~ 159 (174)
T 2o70_A 105 YRLNSEYKER-FGFPFVICARL---NNKADIVRQLSERLKNRRTAELECAIEEVKKICS 159 (174)
T ss_dssp HHHHHHHHHH-HSSCCCCCGGG---CCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-CCCeEEEeeCC---CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 3468888888 87766655443 6789999999999998766677777777776654
No 189
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=21.05 E-value=47 Score=30.98 Aligned_cols=55 Identities=13% Similarity=0.169 Sum_probs=37.2
Q ss_pred hhcCCcccccccccCchhHHHHHhh----CCceeeccccccchhhHHHHHhhhc-ceeecCCCCCCccCHHHHHHHHHHH
Q 012063 352 VLGHPSTGGFLTHCGWNSTLESIVH----GVPLIAWPLYAEQRLNAVILSEDLN-VALRPPEYENGLIKREEIAKVIKGL 426 (471)
Q Consensus 352 ~L~~~~~~~~ItHgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~~~~~~G-~g~~~~~~~~~~~~~~~l~~~i~~~ 426 (471)
+-..++ ++|+=||-||++.|... ++|++.+= .| +|..- + ++.+++.++|+++
T Consensus 105 ~~~~~D--lvI~lGGDGT~L~aa~~~~~~~~PvlGiN---------------~G~LGFLt---~---~~~~~~~~~l~~v 161 (365)
T 3pfn_A 105 ISNQID--FIICLGGDGTLLYASSLFQGSVPPVMAFH---------------LGSLGFLT---P---FSFENFQSQVTQV 161 (365)
T ss_dssp CTTTCS--EEEEESSTTHHHHHHHHCSSSCCCEEEEE---------------SSSCTTTC---C---EESTTHHHHHHHH
T ss_pred cccCCC--EEEEEcChHHHHHHHHHhccCCCCEEEEc---------------CCCCccce---e---ecHHHHHHHHHHH
Confidence 334566 99999999999999763 57877762 12 12111 2 5567788888888
Q ss_pred hCC
Q 012063 427 MHG 429 (471)
Q Consensus 427 l~~ 429 (471)
+++
T Consensus 162 l~g 164 (365)
T 3pfn_A 162 IEG 164 (365)
T ss_dssp HHS
T ss_pred HcC
Confidence 765
No 190
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=20.84 E-value=68 Score=27.72 Aligned_cols=26 Identities=19% Similarity=0.296 Sum_probs=19.8
Q ss_pred ccCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012063 16 MGHLIPHVELAKQLVLRHDISVTFLVPTI 44 (471)
Q Consensus 16 ~GH~~P~l~La~~L~~r~Gh~Vt~~~~~~ 44 (471)
.|.+ -.++|++|+++ |++|+++..+.
T Consensus 28 SG~m--G~aiA~~~~~~-Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHL--GKIITETLLSA-GYEVCLITTKR 53 (232)
T ss_dssp CCHH--HHHHHHHHHHT-TCEEEEEECTT
T ss_pred CCHH--HHHHHHHHHHC-CCEEEEEeCCc
Confidence 4543 35789999876 99999998663
No 191
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=20.78 E-value=1.2e+02 Score=30.24 Aligned_cols=27 Identities=19% Similarity=0.314 Sum_probs=23.2
Q ss_pred ccccccccC------chhHHHHHhhCCceeecc
Q 012063 358 TGGFLTHCG------WNSTLESIVHGVPLIAWP 384 (471)
Q Consensus 358 ~~~~ItHgG------~~s~~eal~~GvP~l~~P 384 (471)
.+++++|.| .+.+.||.+.++|+|++-
T Consensus 69 ~~v~~~tsGpG~~N~~~gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 69 LGVTVGSGGPGASHLINGLYDAAMDNIPVVAIL 101 (590)
T ss_dssp CCEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEeCcChHHHHHHHHHHHHHhcCCCEEEEc
Confidence 348889988 678999999999999974
No 192
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=20.74 E-value=1.2e+02 Score=27.54 Aligned_cols=30 Identities=17% Similarity=-0.026 Sum_probs=24.2
Q ss_pred CCcccccccccCchhHHHHHh--------hCCceeecccc
Q 012063 355 HPSTGGFLTHCGWNSTLESIV--------HGVPLIAWPLY 386 (471)
Q Consensus 355 ~~~~~~~ItHgG~~s~~eal~--------~GvP~l~~P~~ 386 (471)
..+ ++|.=||-||+.|++. .++|+.++|..
T Consensus 82 ~~d--~vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 82 GVA--TVIAGGGDGTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp TCS--EEEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred CCC--EEEEEccchHHHHHHHHHhhcccCCCCeEEEecCc
Confidence 345 8999999999999863 46798889975
No 193
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=20.73 E-value=88 Score=28.92 Aligned_cols=30 Identities=17% Similarity=0.266 Sum_probs=21.9
Q ss_pred CCcccccccc-cCchhHHHHHhhCCceeecccc
Q 012063 355 HPSTGGFLTH-CGWNSTLESIVHGVPLIAWPLY 386 (471)
Q Consensus 355 ~~~~~~~ItH-gG~~s~~eal~~GvP~l~~P~~ 386 (471)
+++ ++|+| .++.+...|-..|+|.+.+-..
T Consensus 114 ~PD--~Vv~~~~~~~~~~aa~~~giP~v~~~~~ 144 (391)
T 3tsa_A 114 RPS--VLLVDVCALIGRVLGGLLDLPVVLHRWG 144 (391)
T ss_dssp CCS--EEEEETTCHHHHHHHHHTTCCEEEECCS
T ss_pred CCC--EEEeCcchhHHHHHHHHhCCCEEEEecC
Confidence 577 66666 6666777788899999887443
No 194
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=20.46 E-value=2.2e+02 Score=21.19 Aligned_cols=47 Identities=6% Similarity=0.045 Sum_probs=27.1
Q ss_pred CCceeeccccccchhhHHHHHhhhcc-eeecCCCCCCccCHHHHHHHHHHHhCC
Q 012063 377 GVPLIAWPLYAEQRLNAVILSEDLNV-ALRPPEYENGLIKREEIAKVIKGLMHG 429 (471)
Q Consensus 377 GvP~l~~P~~~DQ~~na~~~~~~~G~-g~~~~~~~~~~~~~~~l~~~i~~~l~~ 429 (471)
..|.|++--..|.......+.. .|+ +...++ ++.++|..+|+.++..
T Consensus 72 ~~~ii~~s~~~~~~~~~~~~~~-~ga~~~l~KP-----~~~~~L~~~i~~~~~~ 119 (139)
T 2jk1_A 72 ETVRIIITGYTDSASMMAAIND-AGIHQFLTKP-----WHPEQLLSSARNAARM 119 (139)
T ss_dssp TSEEEEEESCTTCHHHHHHHHH-TTCCEEEESS-----CCHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHh-hchhhhccCC-----CCHHHHHHHHHHHHHH
Confidence 5677766433333322222333 344 344333 7899999999998854
No 195
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=20.45 E-value=59 Score=24.79 Aligned_cols=30 Identities=17% Similarity=0.097 Sum_probs=19.6
Q ss_pred cCCCccEEEeCCCCccH--HHHHHH---hCCceEE
Q 012063 102 ASTHLMALVVDPFGTDV--FDVARE---FYVPSYL 131 (471)
Q Consensus 102 ~~~~~D~VI~D~~~~~~--~~~A~~---lgIP~v~ 131 (471)
++.+||+||.|..++.. ..+++. .++|++.
T Consensus 50 ~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~ 84 (123)
T 2lpm_A 50 RKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIF 84 (123)
T ss_dssp HHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCC
T ss_pred HhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEE
Confidence 34589999999876533 334443 5788554
No 196
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=20.35 E-value=95 Score=23.66 Aligned_cols=32 Identities=19% Similarity=0.296 Sum_probs=20.5
Q ss_pred CCccEEEeCCCCcc--HHHHHHHh---------CCceEEEecc
Q 012063 104 THLMALVVDPFGTD--VFDVAREF---------YVPSYLYFLT 135 (471)
Q Consensus 104 ~~~D~VI~D~~~~~--~~~~A~~l---------gIP~v~~~~~ 135 (471)
.+||+||.|..++. +..+.+.+ .+|.+++...
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 48999999976643 44444443 2787766543
No 197
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=20.03 E-value=1.7e+02 Score=24.15 Aligned_cols=36 Identities=19% Similarity=0.250 Sum_probs=29.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 012063 6 HHVACMPSPGMGHLIPHVELAKQLVLRHDISVTFLVPT 43 (471)
Q Consensus 6 ~~i~~~~~p~~GH~~P~l~La~~L~~r~Gh~Vt~~~~~ 43 (471)
.||++.-.++.|-+ =...|.++|.++ |++|.++.++
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~-g~~V~vv~T~ 37 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEEL-DFSVDLVISR 37 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHT-TCEEEEEECH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHC-CCEEEEEECh
Confidence 47888888888855 578999999775 9999999876
No 198
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=20.03 E-value=3.7e+02 Score=22.15 Aligned_cols=116 Identities=8% Similarity=-0.065 Sum_probs=0.0
Q ss_pred chhhhhccCCCccEEEEEeCCCcCCCHHhHHHHHHHHHhCCCceEEEEec---CCCCCCCCccccCCCCCCCCCCCChhh
Q 012063 256 MCIRWLDNQASGSVLFVSFGSGGTLSYDQLEELALGLELSEQQFLWVVKS---PDDKSASGSFFDVHSKTDPFGFLPTGF 332 (471)
Q Consensus 256 ~~~~wl~~~~~~~~i~vs~GS~~~~~~~~~~~~~~al~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~lp~~~ 332 (471)
++-++|.+.. ...|+-|. .........++....+-+++=+... ... .....+..
T Consensus 35 ~lg~~la~~g---~~lv~GGG----~~GlM~a~~~ga~~~GG~viGv~p~~l~~~e--------------~~~~~~~~-- 91 (189)
T 3sbx_A 35 AVGAAIAARG---WTLVWGGG----HVSAMGAVSSAARAHGGWTVGVIPKMLVHRE--------------LADHDADE-- 91 (189)
T ss_dssp HHHHHHHHTT---CEEEECCB----CSHHHHHHHHHHHTTTCCEEEEEETTTTTTT--------------TBCTTCSE--
T ss_pred HHHHHHHHCC---CEEEECCC----ccCHHHHHHHHHHHcCCcEEEEcCchhhhcc--------------cCCCCCCe--
Q ss_pred HHhhcCCCeeeccCcchhhhhcCCcccccccccCchhHHHHHhh---------CCceeec---cccccchhhHHHHHhhh
Q 012063 333 LDRTKEQGLVVPSWAPQVEVLGHPSTGGFLTHCGWNSTLESIVH---------GVPLIAW---PLYAEQRLNAVILSEDL 400 (471)
Q Consensus 333 ~~~~~~~~v~v~~~~pq~~~L~~~~~~~~ItHgG~~s~~eal~~---------GvP~l~~---P~~~DQ~~na~~~~~~~ 400 (471)
.+.+..+.-...++-..+...++--||.||+-|.... ++|++++ .++.+=..+-.++.+ .
T Consensus 92 -------~i~~~~~~~Rk~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~~gfw~~l~~~l~~~~~-~ 163 (189)
T 3sbx_A 92 -------LVVTETMWERKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDPWGHFDGLRAWLSELAD-T 163 (189)
T ss_dssp -------EEEESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTCTTHHHHHHHHHHHH-T
T ss_pred -------eEEcCCHHHHHHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHH-C
Q ss_pred cc
Q 012063 401 NV 402 (471)
Q Consensus 401 G~ 402 (471)
|.
T Consensus 164 Gf 165 (189)
T 3sbx_A 164 GY 165 (189)
T ss_dssp TS
T ss_pred CC
No 199
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=20.01 E-value=1.2e+02 Score=29.34 Aligned_cols=25 Identities=16% Similarity=0.186 Sum_probs=20.6
Q ss_pred CCccEEEeCCCCccHHHHHHHhCCceEE
Q 012063 104 THLMALVVDPFGTDVFDVAREFYVPSYL 131 (471)
Q Consensus 104 ~~~D~VI~D~~~~~~~~~A~~lgIP~v~ 131 (471)
.+||++|.+.. ...+|+++|||++.
T Consensus 374 ~~pDllig~~~---~~~~a~k~gip~~~ 398 (458)
T 3pdi_B 374 GQAQLVIGNSH---ALASARRLGVPLLR 398 (458)
T ss_dssp HTCSEEEECTT---HHHHHHHTTCCEEE
T ss_pred cCCCEEEEChh---HHHHHHHcCCCEEE
Confidence 38999999853 66799999999765
Done!