Query 012068
Match_columns 471
No_of_seqs 197 out of 1389
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 08:17:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012068.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012068hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 3E-115 5E-120 880.8 41.3 421 32-465 23-453 (454)
2 PLN02209 serine carboxypeptida 100.0 3E-102 7E-107 794.8 43.8 403 35-462 21-437 (437)
3 PLN03016 sinapoylglucose-malat 100.0 8E-102 2E-106 791.7 41.8 401 35-462 19-433 (433)
4 PF00450 Peptidase_S10: Serine 100.0 5E-101 1E-105 794.3 33.3 401 43-459 1-415 (415)
5 PTZ00472 serine carboxypeptida 100.0 4.9E-95 1.1E-99 750.9 41.5 383 48-462 43-461 (462)
6 PLN02213 sinapoylglucose-malat 100.0 1E-73 2.3E-78 567.7 32.1 311 126-462 1-319 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 6.3E-70 1.4E-74 543.6 23.1 382 50-460 65-491 (498)
8 KOG1283 Serine carboxypeptidas 100.0 1E-68 2.2E-73 500.0 16.0 389 53-458 4-412 (414)
9 TIGR03611 RutD pyrimidine util 99.4 2.6E-11 5.6E-16 115.4 17.8 116 68-225 2-117 (257)
10 TIGR01250 pro_imino_pep_2 prol 99.3 4E-10 8.7E-15 108.8 21.4 130 53-224 3-132 (288)
11 PHA02857 monoglyceride lipase; 99.2 5.9E-10 1.3E-14 108.5 19.3 123 64-224 10-133 (276)
12 PLN02824 hydrolase, alpha/beta 99.2 7.7E-10 1.7E-14 108.9 19.8 124 55-223 11-137 (294)
13 TIGR03056 bchO_mg_che_rel puta 99.2 8.5E-10 1.8E-14 106.8 19.2 108 78-225 25-132 (278)
14 PLN02298 hydrolase, alpha/beta 99.2 1.3E-09 2.8E-14 109.3 19.4 140 50-224 30-170 (330)
15 PRK03204 haloalkane dehalogena 99.2 2.6E-09 5.7E-14 104.9 20.3 122 53-223 15-136 (286)
16 PRK00870 haloalkane dehalogena 99.1 7.6E-09 1.6E-13 102.3 22.4 141 35-222 7-149 (302)
17 PLN02385 hydrolase; alpha/beta 99.1 2.4E-09 5.1E-14 108.3 17.9 127 64-224 71-198 (349)
18 PRK10673 acyl-CoA esterase; Pr 99.1 2.1E-09 4.5E-14 103.0 16.7 104 76-221 11-114 (255)
19 PRK03592 haloalkane dehalogena 99.1 1.5E-09 3.3E-14 106.8 15.1 115 64-225 16-130 (295)
20 KOG4409 Predicted hydrolase/ac 99.1 7.4E-09 1.6E-13 100.7 18.0 138 48-226 61-198 (365)
21 PLN02679 hydrolase, alpha/beta 99.1 2E-08 4.3E-13 102.1 21.9 103 80-222 87-190 (360)
22 TIGR03343 biphenyl_bphD 2-hydr 99.1 4.9E-08 1.1E-12 95.0 23.4 59 376-458 223-281 (282)
23 TIGR02427 protocat_pcaD 3-oxoa 99.1 1.8E-08 3.8E-13 94.9 19.5 59 376-458 193-251 (251)
24 TIGR02240 PHA_depoly_arom poly 99.0 1.1E-08 2.4E-13 99.8 17.6 117 64-224 11-127 (276)
25 PLN02578 hydrolase 99.0 3.8E-08 8.1E-13 99.8 21.1 112 64-222 75-186 (354)
26 PLN03084 alpha/beta hydrolase 99.0 5.4E-08 1.2E-12 99.3 21.1 109 78-223 124-232 (383)
27 PRK10349 carboxylesterase BioH 99.0 3E-08 6.6E-13 95.3 16.8 59 376-458 196-254 (256)
28 PF12697 Abhydrolase_6: Alpha/ 98.9 1E-08 2.3E-13 94.7 11.8 103 84-225 1-103 (228)
29 PRK06489 hypothetical protein; 98.9 1.7E-07 3.7E-12 95.2 20.4 141 49-222 38-188 (360)
30 PLN03087 BODYGUARD 1 domain co 98.9 3.3E-07 7.2E-12 95.7 22.2 133 50-221 174-307 (481)
31 PRK14875 acetoin dehydrogenase 98.9 1.3E-07 2.8E-12 96.0 18.9 103 79-222 129-231 (371)
32 TIGR01738 bioH putative pimelo 98.9 1.5E-07 3.2E-12 88.4 17.8 58 376-457 188-245 (245)
33 PLN02652 hydrolase; alpha/beta 98.8 3.1E-07 6.8E-12 94.2 20.3 127 64-224 120-246 (395)
34 PLN02894 hydrolase, alpha/beta 98.8 2.6E-07 5.6E-12 95.2 19.6 109 79-223 103-211 (402)
35 TIGR01249 pro_imino_pep_1 prol 98.8 5.8E-07 1.3E-11 89.1 20.8 125 54-224 6-131 (306)
36 PRK10749 lysophospholipase L2; 98.8 3E-07 6.4E-12 92.3 18.2 126 64-224 40-167 (330)
37 PRK11126 2-succinyl-6-hydroxy- 98.8 1.3E-07 2.9E-12 89.8 14.2 100 81-222 2-101 (242)
38 TIGR03695 menH_SHCHC 2-succiny 98.7 4.4E-07 9.5E-12 85.1 15.7 105 81-223 1-105 (251)
39 PLN02965 Probable pheophorbida 98.7 6E-07 1.3E-11 86.5 16.7 101 84-222 6-106 (255)
40 PRK08775 homoserine O-acetyltr 98.7 4.4E-07 9.5E-12 91.5 16.0 62 376-460 277-339 (343)
41 KOG4178 Soluble epoxide hydrol 98.6 2.1E-06 4.5E-11 83.5 18.0 137 50-227 20-157 (322)
42 PLN02980 2-oxoglutarate decarb 98.6 1E-06 2.2E-11 105.1 17.7 108 77-222 1367-1479(1655)
43 TIGR01607 PST-A Plasmodium sub 98.5 1.7E-06 3.6E-11 86.9 14.3 151 64-224 7-186 (332)
44 COG1506 DAP2 Dipeptidyl aminop 98.5 1.3E-06 2.9E-11 94.9 13.1 118 57-197 368-492 (620)
45 PRK00175 metX homoserine O-ace 98.5 1.2E-05 2.5E-10 82.4 18.9 65 376-460 309-374 (379)
46 PRK07581 hypothetical protein; 98.4 1.5E-05 3.2E-10 80.2 19.1 59 376-458 275-334 (339)
47 KOG1454 Predicted hydrolase/ac 98.3 2.2E-05 4.7E-10 78.5 14.9 60 377-460 265-324 (326)
48 PLN02511 hydrolase 98.2 7.4E-06 1.6E-10 84.1 11.5 118 54-198 73-193 (388)
49 PRK05855 short chain dehydroge 98.2 5E-05 1.1E-09 81.8 17.7 101 64-196 12-112 (582)
50 PLN02872 triacylglycerol lipas 98.2 2E-05 4.2E-10 80.8 13.6 61 376-459 325-388 (395)
51 COG2267 PldB Lysophospholipase 98.1 8.9E-05 1.9E-09 73.2 15.5 136 52-226 9-145 (298)
52 PF00561 Abhydrolase_1: alpha/ 98.1 8.8E-06 1.9E-10 75.9 7.1 56 375-454 174-229 (230)
53 PF10340 DUF2424: Protein of u 98.0 2E-05 4.3E-10 78.9 9.2 131 67-226 106-238 (374)
54 TIGR03100 hydr1_PEP hydrolase, 97.9 0.00031 6.7E-09 68.5 15.6 79 126-224 57-135 (274)
55 TIGR01392 homoserO_Ac_trn homo 97.9 0.002 4.2E-08 65.2 20.2 63 376-458 288-351 (351)
56 PRK10985 putative hydrolase; P 97.7 0.0011 2.4E-08 66.2 15.7 134 56-224 35-169 (324)
57 PRK05077 frsA fermentation/res 97.6 0.00027 5.7E-09 73.2 10.4 130 56-224 170-301 (414)
58 PRK06765 homoserine O-acetyltr 97.6 0.00096 2.1E-08 68.4 13.7 65 376-460 323-388 (389)
59 PF00326 Peptidase_S9: Prolyl 97.6 0.00031 6.6E-09 65.6 9.0 91 125-227 13-103 (213)
60 PLN02211 methyl indole-3-aceta 97.6 0.0003 6.5E-09 68.6 9.0 106 79-222 16-121 (273)
61 TIGR03101 hydr2_PEP hydrolase, 97.5 0.0008 1.7E-08 65.2 11.1 124 64-226 9-137 (266)
62 TIGR01840 esterase_phb esteras 97.5 0.00037 7.9E-09 65.2 8.1 115 78-222 10-129 (212)
63 KOG1455 Lysophospholipase [Lip 97.4 0.017 3.8E-07 55.8 18.6 128 64-223 37-164 (313)
64 KOG2564 Predicted acetyltransf 97.3 0.0013 2.9E-08 62.5 8.9 109 78-220 71-179 (343)
65 TIGR02821 fghA_ester_D S-formy 97.3 0.0026 5.5E-08 62.1 11.2 51 164-225 124-175 (275)
66 COG0596 MhpC Predicted hydrola 97.0 0.0043 9.3E-08 57.5 9.9 104 81-224 21-124 (282)
67 PLN02442 S-formylglutathione h 96.9 0.0072 1.6E-07 59.3 10.9 57 157-226 125-181 (283)
68 cd00707 Pancreat_lipase_like P 96.8 0.0014 3.1E-08 64.0 4.4 112 79-222 34-146 (275)
69 KOG2382 Predicted alpha/beta h 96.8 0.018 3.9E-07 56.4 11.8 61 375-459 252-312 (315)
70 COG3509 LpqC Poly(3-hydroxybut 96.6 0.028 6.2E-07 54.2 11.5 125 64-223 44-179 (312)
71 PRK10566 esterase; Provisional 96.5 0.014 3E-07 55.6 9.3 61 377-459 187-247 (249)
72 KOG1515 Arylacetamide deacetyl 96.5 0.021 4.5E-07 57.1 10.7 136 64-226 71-210 (336)
73 PRK10115 protease 2; Provision 96.3 0.0087 1.9E-07 66.0 7.6 140 58-227 420-563 (686)
74 TIGR00976 /NonD putative hydro 96.3 0.014 3.1E-07 62.8 8.9 129 64-226 6-135 (550)
75 TIGR03230 lipo_lipase lipoprot 96.3 0.014 3E-07 60.5 8.1 81 126-222 73-153 (442)
76 PLN00021 chlorophyllase 96.2 0.013 2.9E-07 58.2 7.2 116 78-225 49-168 (313)
77 TIGR01838 PHA_synth_I poly(R)- 96.0 0.34 7.3E-06 51.7 17.2 85 127-226 221-305 (532)
78 KOG2100 Dipeptidyl aminopeptid 95.9 0.011 2.3E-07 65.7 5.6 137 64-226 507-647 (755)
79 PF10230 DUF2305: Uncharacteri 95.9 0.045 9.7E-07 53.1 9.1 118 81-224 2-123 (266)
80 TIGR01836 PHA_synth_III_C poly 95.8 0.41 9E-06 48.3 16.5 61 376-459 286-349 (350)
81 PRK05371 x-prolyl-dipeptidyl a 95.8 0.23 4.9E-06 55.5 15.3 85 124-225 277-375 (767)
82 PF00975 Thioesterase: Thioest 95.6 0.038 8.2E-07 51.8 7.5 101 83-222 2-103 (229)
83 PF08386 Abhydrolase_4: TAP-li 95.6 0.05 1.1E-06 44.6 7.0 64 377-464 35-98 (103)
84 PRK10162 acetyl esterase; Prov 95.4 0.043 9.3E-07 54.7 7.4 63 158-225 135-197 (318)
85 PF06500 DUF1100: Alpha/beta h 95.4 0.0092 2E-07 60.7 2.4 83 125-226 217-299 (411)
86 PF10503 Esterase_phd: Esteras 94.7 0.1 2.3E-06 49.0 7.4 47 167-223 86-132 (220)
87 PF07519 Tannase: Tannase and 94.3 3.1 6.8E-05 43.9 17.9 86 365-463 342-430 (474)
88 PF02129 Peptidase_S15: X-Pro 94.0 0.074 1.6E-06 51.7 4.9 84 126-227 57-140 (272)
89 PF12695 Abhydrolase_5: Alpha/ 94.0 0.07 1.5E-06 45.7 4.2 94 83-222 1-94 (145)
90 PF03096 Ndr: Ndr family; Int 93.8 0.36 7.7E-06 46.9 9.0 119 80-237 22-144 (283)
91 PRK11460 putative hydrolase; P 93.7 0.34 7.4E-06 45.9 8.8 38 160-198 86-123 (232)
92 PF05577 Peptidase_S28: Serine 93.7 0.18 4E-06 52.5 7.5 95 126-233 59-158 (434)
93 KOG1838 Alpha/beta hydrolase [ 93.6 0.33 7.1E-06 49.4 8.7 109 78-222 122-235 (409)
94 KOG4391 Predicted alpha/beta h 93.4 0.22 4.8E-06 46.0 6.3 122 65-225 65-186 (300)
95 COG3208 GrsT Predicted thioest 93.2 3.4 7.4E-05 39.1 14.1 59 376-458 176-234 (244)
96 KOG2931 Differentiation-relate 93.2 5.2 0.00011 38.9 15.4 93 122-238 74-168 (326)
97 PF02230 Abhydrolase_2: Phosph 92.8 0.12 2.5E-06 48.4 4.0 58 157-226 86-143 (216)
98 COG4099 Predicted peptidase [G 92.6 0.93 2E-05 44.0 9.5 55 160-224 251-305 (387)
99 cd00312 Esterase_lipase Estera 92.1 0.41 8.8E-06 50.7 7.5 59 157-224 156-214 (493)
100 KOG3975 Uncharacterized conser 92.1 0.56 1.2E-05 44.3 7.3 119 65-203 13-131 (301)
101 PRK11071 esterase YqiA; Provis 90.7 0.32 6.8E-06 44.6 4.2 54 376-458 136-189 (190)
102 PRK10566 esterase; Provisional 90.7 0.35 7.5E-06 45.8 4.7 110 68-198 14-127 (249)
103 PRK11460 putative hydrolase; P 90.0 0.52 1.1E-05 44.7 5.2 62 376-457 148-209 (232)
104 KOG2183 Prolylcarboxypeptidase 89.8 0.51 1.1E-05 47.7 5.1 68 126-197 111-186 (492)
105 PRK10439 enterobactin/ferric e 89.3 1.5 3.3E-05 45.3 8.4 36 178-223 288-323 (411)
106 PLN02211 methyl indole-3-aceta 89.1 1 2.2E-05 43.8 6.6 59 376-459 211-269 (273)
107 PRK10252 entF enterobactin syn 89.1 2.3 5E-05 50.6 10.9 103 81-222 1068-1170(1296)
108 COG0596 MhpC Predicted hydrola 88.4 1.4 2.9E-05 40.4 6.7 61 374-457 219-279 (282)
109 PLN02454 triacylglycerol lipas 88.3 1.1 2.4E-05 45.8 6.4 69 154-225 205-273 (414)
110 PF03583 LIP: Secretory lipase 88.1 1.3 2.8E-05 43.5 6.6 69 376-464 219-289 (290)
111 PRK13604 luxD acyl transferase 87.4 3.3 7.1E-05 41.0 8.9 123 64-224 19-142 (307)
112 PF01764 Lipase_3: Lipase (cla 87.1 1.3 2.8E-05 37.9 5.3 62 156-223 45-106 (140)
113 PF07859 Abhydrolase_3: alpha/ 86.7 1.5 3.2E-05 40.4 5.8 64 156-225 47-112 (211)
114 TIGR03502 lipase_Pla1_cef extr 85.4 3.4 7.5E-05 46.0 8.7 99 80-198 448-575 (792)
115 PF12695 Abhydrolase_5: Alpha/ 85.4 0.97 2.1E-05 38.5 3.7 44 374-440 102-145 (145)
116 PF02230 Abhydrolase_2: Phosph 85.4 1.2 2.5E-05 41.6 4.4 59 376-458 155-213 (216)
117 COG0400 Predicted esterase [Ge 84.9 3.3 7.1E-05 38.6 7.1 62 155-227 77-138 (207)
118 cd00519 Lipase_3 Lipase (class 84.8 2.1 4.5E-05 40.3 5.9 60 157-224 110-169 (229)
119 COG0400 Predicted esterase [Ge 84.1 1.5 3.2E-05 40.8 4.5 59 376-459 146-204 (207)
120 cd00741 Lipase Lipase. Lipase 83.7 2.1 4.5E-05 37.5 5.1 44 156-202 9-52 (153)
121 PF05728 UPF0227: Uncharacteri 83.5 1.4 2.9E-05 40.4 3.9 38 177-227 58-95 (187)
122 PF05990 DUF900: Alpha/beta hy 83.2 1.9 4.1E-05 40.9 4.9 67 156-226 74-140 (233)
123 PF06342 DUF1057: Alpha/beta h 82.7 20 0.00044 34.8 11.5 89 366-457 202-296 (297)
124 KOG4667 Predicted esterase [Li 81.4 29 0.00063 32.5 11.5 50 376-449 199-248 (269)
125 PF11288 DUF3089: Protein of u 81.4 1.9 4.1E-05 40.0 3.9 44 156-201 75-118 (207)
126 PLN02733 phosphatidylcholine-s 81.0 3.4 7.4E-05 43.1 6.2 41 155-198 142-182 (440)
127 COG3319 Thioesterase domains o 80.7 14 0.0003 35.6 9.8 58 153-223 46-103 (257)
128 PLN02571 triacylglycerol lipas 80.3 4.6 0.0001 41.5 6.7 70 155-225 204-277 (413)
129 PF06057 VirJ: Bacterial virul 80.2 3.9 8.4E-05 37.4 5.5 63 153-224 46-108 (192)
130 PRK13604 luxD acyl transferase 80.2 3.3 7.1E-05 41.0 5.4 46 376-443 202-247 (307)
131 smart00824 PKS_TE Thioesterase 79.4 8.2 0.00018 34.6 7.7 77 125-221 24-100 (212)
132 PRK11071 esterase YqiA; Provis 78.1 4.9 0.00011 36.7 5.7 78 82-198 2-81 (190)
133 KOG4627 Kynurenine formamidase 77.7 1.4 3.1E-05 40.5 1.9 73 136-224 101-173 (270)
134 KOG2182 Hydrolytic enzymes of 75.9 10 0.00022 39.5 7.7 50 153-202 147-196 (514)
135 PF00756 Esterase: Putative es 75.5 6.3 0.00014 37.2 5.9 52 164-226 101-153 (251)
136 KOG1552 Predicted alpha/beta h 74.8 8.9 0.00019 36.6 6.4 107 79-225 58-165 (258)
137 PF12146 Hydrolase_4: Putative 74.2 18 0.00039 27.9 7.1 78 65-166 2-79 (79)
138 PF10081 Abhydrolase_9: Alpha/ 74.0 6.6 0.00014 38.1 5.4 42 154-195 85-126 (289)
139 PF05448 AXE1: Acetyl xylan es 74.0 14 0.00031 36.8 8.1 142 64-223 66-209 (320)
140 PLN02719 triacylglycerol lipas 73.1 9.8 0.00021 40.1 6.8 71 155-225 273-347 (518)
141 PLN02753 triacylglycerol lipas 72.8 9.1 0.0002 40.4 6.5 73 153-225 285-361 (531)
142 PF11144 DUF2920: Protein of u 72.7 5.4 0.00012 40.7 4.7 61 156-226 161-222 (403)
143 PRK05077 frsA fermentation/res 72.4 7.1 0.00015 40.5 5.7 58 376-460 355-412 (414)
144 PF05677 DUF818: Chlamydia CHL 71.6 11 0.00023 37.8 6.3 93 76-193 132-230 (365)
145 KOG3101 Esterase D [General fu 71.2 24 0.00052 32.8 8.0 154 51-227 8-180 (283)
146 PRK04940 hypothetical protein; 70.1 7.7 0.00017 35.2 4.7 59 153-227 38-96 (180)
147 PF00151 Lipase: Lipase; Inte 69.4 1.1 2.4E-05 44.9 -1.0 105 78-201 68-173 (331)
148 COG2945 Predicted hydrolase of 69.0 5.8 0.00013 36.2 3.6 59 135-201 68-126 (210)
149 KOG2281 Dipeptidyl aminopeptid 68.1 15 0.00032 39.6 6.8 125 66-226 624-765 (867)
150 COG0657 Aes Esterase/lipase [L 67.8 13 0.00028 36.6 6.3 45 177-227 151-195 (312)
151 PF07819 PGAP1: PGAP1-like pro 67.7 37 0.0008 31.9 9.1 96 80-193 3-100 (225)
152 COG2272 PnbA Carboxylesterase 67.6 42 0.00091 35.2 9.9 34 162-196 165-198 (491)
153 KOG1552 Predicted alpha/beta h 67.0 9.4 0.0002 36.5 4.7 61 376-460 192-252 (258)
154 PF08840 BAAT_C: BAAT / Acyl-C 67.0 6 0.00013 36.9 3.5 47 165-222 9-55 (213)
155 PLN02324 triacylglycerol lipas 66.6 15 0.00033 37.7 6.5 48 154-202 192-239 (415)
156 PF11187 DUF2974: Protein of u 65.9 15 0.00032 34.7 5.9 40 159-202 69-108 (224)
157 PLN02408 phospholipase A1 65.8 15 0.00033 37.2 6.2 46 156-202 179-224 (365)
158 PLN02802 triacylglycerol lipas 61.7 17 0.00037 38.3 5.8 64 156-224 309-372 (509)
159 PLN02761 lipase class 3 family 60.7 22 0.00047 37.7 6.4 72 154-225 267-344 (527)
160 PF08840 BAAT_C: BAAT / Acyl-C 60.6 5.4 0.00012 37.2 1.9 48 376-441 115-163 (213)
161 PRK14566 triosephosphate isome 58.1 23 0.0005 34.1 5.7 61 155-226 188-248 (260)
162 PRK14567 triosephosphate isome 57.6 26 0.00057 33.6 6.0 61 155-226 178-238 (253)
163 PLN00413 triacylglycerol lipas 57.5 12 0.00026 39.1 3.9 39 160-201 269-307 (479)
164 COG4425 Predicted membrane pro 57.2 25 0.00054 36.3 5.9 37 154-190 373-409 (588)
165 PRK07868 acyl-CoA synthetase; 55.7 23 0.0005 41.1 6.4 61 376-460 297-361 (994)
166 PLN02310 triacylglycerol lipas 55.3 27 0.00059 35.9 6.0 64 156-224 186-250 (405)
167 PF08237 PE-PPE: PE-PPE domain 54.7 43 0.00093 31.6 6.9 62 153-222 28-89 (225)
168 KOG2551 Phospholipase/carboxyh 54.6 33 0.00071 32.2 5.8 58 376-458 163-222 (230)
169 PLN02934 triacylglycerol lipas 53.7 20 0.00043 37.9 4.7 41 159-202 305-345 (515)
170 COG1073 Hydrolases of the alph 53.4 28 0.0006 33.0 5.7 61 377-459 233-296 (299)
171 PLN02162 triacylglycerol lipas 53.1 17 0.00037 37.9 4.2 41 159-202 262-302 (475)
172 PF05057 DUF676: Putative seri 52.1 19 0.00041 33.6 4.1 50 153-203 54-103 (217)
173 COG0429 Predicted hydrolase of 51.7 1.1E+02 0.0025 30.5 9.4 132 56-222 53-185 (345)
174 PLN02847 triacylglycerol lipas 50.4 27 0.00057 37.6 5.1 65 153-225 225-294 (633)
175 COG0627 Predicted esterase [Ge 49.9 90 0.002 31.1 8.6 90 123-226 95-190 (316)
176 PF15253 STIL_N: SCL-interrupt 49.9 19 0.00042 36.8 3.9 35 52-89 200-235 (410)
177 KOG2984 Predicted hydrolase [G 49.6 15 0.00033 33.9 2.8 106 64-202 30-138 (277)
178 PF06821 Ser_hydrolase: Serine 48.7 21 0.00046 32.0 3.7 49 164-222 42-90 (171)
179 PF03283 PAE: Pectinacetyleste 48.2 1.1E+02 0.0023 31.2 9.0 128 67-202 37-180 (361)
180 KOG3079 Uridylate kinase/adeny 48.2 10 0.00022 34.4 1.5 16 79-94 5-20 (195)
181 PLN03037 lipase class 3 family 48.2 38 0.00083 35.8 5.8 46 157-202 296-342 (525)
182 PF08538 DUF1749: Protein of u 47.9 33 0.00071 33.8 5.0 70 153-227 82-152 (303)
183 PLN03082 Iron-sulfur cluster a 47.0 18 0.00039 32.3 2.9 63 79-142 76-144 (163)
184 PF00681 Plectin: Plectin repe 46.7 16 0.00034 24.9 1.9 33 220-252 11-43 (45)
185 COG1647 Esterase/lipase [Gener 46.6 41 0.00088 31.6 5.1 60 377-458 182-242 (243)
186 COG4757 Predicted alpha/beta h 46.3 45 0.00097 31.6 5.4 65 126-195 57-122 (281)
187 PF09292 Neil1-DNA_bind: Endon 45.0 13 0.00029 24.1 1.2 13 81-93 24-36 (39)
188 PF06821 Ser_hydrolase: Serine 43.8 31 0.00067 31.0 3.9 43 377-444 115-157 (171)
189 TIGR01911 HesB_rel_seleno HesB 43.4 23 0.00049 28.3 2.7 19 83-102 28-46 (92)
190 KOG3253 Predicted alpha/beta h 43.1 71 0.0015 34.5 6.8 53 370-445 298-350 (784)
191 KOG3043 Predicted hydrolase re 42.7 44 0.00096 31.4 4.7 79 369-458 157-238 (242)
192 PLN02429 triosephosphate isome 42.6 55 0.0012 32.5 5.7 60 156-226 239-299 (315)
193 PF06259 Abhydrolase_8: Alpha/ 42.5 41 0.00089 30.4 4.5 65 125-198 62-129 (177)
194 PRK07868 acyl-CoA synthetase; 42.3 43 0.00093 39.0 5.8 39 177-224 140-178 (994)
195 PF07389 DUF1500: Protein of u 42.1 19 0.0004 28.2 1.8 35 159-201 7-41 (100)
196 KOG1553 Predicted alpha/beta h 42.0 59 0.0013 32.6 5.7 54 153-221 290-343 (517)
197 PF02450 LCAT: Lecithin:choles 41.6 24 0.00052 36.2 3.2 25 177-201 118-142 (389)
198 PF12740 Chlorophyllase2: Chlo 40.9 48 0.001 32.0 4.9 63 154-223 63-131 (259)
199 KOG4569 Predicted lipase [Lipi 40.9 51 0.0011 33.1 5.4 41 160-203 156-196 (336)
200 PLN02442 S-formylglutathione h 40.3 52 0.0011 32.0 5.3 48 375-442 216-264 (283)
201 KOG3724 Negative regulator of 38.3 45 0.00099 37.0 4.7 94 84-194 92-198 (973)
202 COG3571 Predicted hydrolase of 36.8 42 0.0009 29.9 3.4 28 174-201 85-112 (213)
203 PF03959 FSH1: Serine hydrolas 35.6 32 0.0007 31.8 2.8 49 376-448 161-209 (212)
204 PF05049 IIGP: Interferon-indu 35.3 25 0.00055 35.8 2.2 59 79-139 32-97 (376)
205 PLN02561 triosephosphate isome 35.2 85 0.0018 30.2 5.6 59 156-225 180-239 (253)
206 PF03403 PAF-AH_p_II: Platelet 35.2 20 0.00044 36.7 1.5 37 179-226 229-265 (379)
207 cd00311 TIM Triosephosphate is 33.8 1.1E+02 0.0024 29.2 6.2 59 156-226 176-235 (242)
208 KOG1516 Carboxylesterase and r 33.4 2.6E+02 0.0057 29.8 9.8 34 162-196 180-213 (545)
209 COG3545 Predicted esterase of 33.3 48 0.001 29.9 3.3 36 177-222 58-93 (181)
210 PF01738 DLH: Dienelactone hyd 33.2 59 0.0013 29.9 4.2 63 376-458 145-215 (218)
211 COG2936 Predicted acyl esteras 33.0 41 0.00089 36.1 3.3 82 127-226 81-162 (563)
212 PRK00042 tpiA triosephosphate 31.8 1.3E+02 0.0028 28.8 6.3 59 156-226 180-239 (250)
213 PRK10115 protease 2; Provision 31.2 80 0.0017 35.1 5.4 57 376-449 605-662 (686)
214 PRK11190 Fe/S biogenesis prote 30.6 39 0.00085 31.0 2.4 63 83-146 25-95 (192)
215 PRK09502 iscA iron-sulfur clus 29.2 57 0.0012 26.7 3.0 63 82-145 25-93 (107)
216 PRK14565 triosephosphate isome 29.2 1.1E+02 0.0024 29.1 5.3 53 155-226 173-225 (237)
217 PF07172 GRP: Glycine rich pro 28.7 72 0.0016 25.7 3.4 10 9-18 4-13 (95)
218 PF06309 Torsin: Torsin; Inte 28.2 46 0.00099 28.3 2.2 17 78-94 49-65 (127)
219 PRK06762 hypothetical protein; 28.0 34 0.00073 30.1 1.5 20 82-102 2-23 (166)
220 PTZ00333 triosephosphate isome 27.9 1.3E+02 0.0029 28.9 5.7 59 156-225 183-242 (255)
221 PF01083 Cutinase: Cutinase; 27.8 1.2E+02 0.0027 27.2 5.2 80 129-225 42-125 (179)
222 COG2945 Predicted hydrolase of 26.5 82 0.0018 29.0 3.7 55 377-457 150-204 (210)
223 PF10503 Esterase_phd: Esteras 25.6 62 0.0014 30.4 2.9 27 376-402 169-195 (220)
224 PLN02517 phosphatidylcholine-s 25.5 66 0.0014 34.8 3.3 46 177-222 212-268 (642)
225 PF01738 DLH: Dienelactone hyd 25.0 56 0.0012 30.0 2.5 42 155-197 76-117 (218)
226 COG2819 Predicted hydrolase of 24.7 1.2E+02 0.0025 29.4 4.5 56 158-223 113-172 (264)
227 PF08060 NOSIC: NOSIC (NUC001) 24.7 73 0.0016 22.5 2.4 22 155-176 13-35 (53)
228 PF04414 tRNA_deacylase: D-ami 24.3 1.7E+02 0.0036 27.4 5.4 106 82-202 30-152 (213)
229 TIGR03712 acc_sec_asp2 accesso 24.2 3.2E+02 0.007 28.9 7.8 114 66-226 277-393 (511)
230 PF07224 Chlorophyllase: Chlor 23.9 81 0.0018 30.5 3.3 38 178-223 120-157 (307)
231 PF03583 LIP: Secretory lipase 23.9 2.3E+02 0.005 27.6 6.7 66 156-226 46-116 (290)
232 PF01555 N6_N4_Mtase: DNA meth 23.4 81 0.0018 28.8 3.3 59 128-190 2-63 (231)
233 PRK14731 coaE dephospho-CoA ki 22.6 98 0.0021 28.5 3.6 32 80-112 3-36 (208)
234 PF01583 APS_kinase: Adenylyls 22.4 48 0.001 29.3 1.4 13 81-93 1-13 (156)
235 KOG3877 NADH:ubiquinone oxidor 22.1 1.1E+02 0.0023 29.9 3.7 50 124-191 68-117 (393)
236 PF15613 WHIM2: WSTF, HB1, Itc 22.1 1.7E+02 0.0037 19.2 3.5 27 66-92 12-38 (38)
237 PF07933 DUF1681: Protein of u 22.0 71 0.0015 28.4 2.3 55 153-215 106-160 (160)
238 TIGR01840 esterase_phb esteras 20.9 73 0.0016 29.2 2.4 29 377-405 169-197 (212)
239 PF10929 DUF2811: Protein of u 20.8 97 0.0021 22.4 2.4 22 156-177 5-26 (57)
240 PRK13962 bifunctional phosphog 20.4 1.8E+02 0.0038 32.1 5.4 61 155-226 574-635 (645)
241 COG3596 Predicted GTPase [Gene 20.0 1.6E+02 0.0034 28.8 4.4 60 79-141 36-100 (296)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-115 Score=880.81 Aligned_cols=421 Identities=52% Similarity=0.955 Sum_probs=381.7
Q ss_pred cccccCccccCCCCCC-CCceeEEeeEEecCCCCceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEc
Q 012068 32 KQQKLDRISALPGQPP-VTFSQFSGYVTVNENHGRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRIN 110 (471)
Q Consensus 32 ~~~~~~~v~~lpg~~~-~~~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~ 110 (471)
+..++++|+.|||++. +++++|||||+|++..+++|||||+||+++|+++||||||||||||||+. |+|.|+|||+++
T Consensus 23 ~~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~ 101 (454)
T KOG1282|consen 23 HVDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVK 101 (454)
T ss_pred ccchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEc
Confidence 3448899999999985 88999999999998888999999999999999999999999999999996 999999999999
Q ss_pred CCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCcc
Q 012068 111 RNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGH 190 (471)
Q Consensus 111 ~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~ 190 (471)
.++.+|+.||||||+.||||||||||||||||+++..++. .+|+.+|+|+++||++||++||||++|+|||+|||||||
T Consensus 102 ~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~-~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~ 180 (454)
T KOG1282|consen 102 YNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYK-TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGH 180 (454)
T ss_pred CCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCc-CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccce
Confidence 9988999999999999999999999999999998887665 489999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHhccCCCCeeeeeeeEeeccccCcccccccchhhhhccCCCChHHHHHHHhhcccCC------CCChHH
Q 012068 191 YVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNYYDSIGTVTFWWTHSMISDKTYRSIINHCNFSA------EKSSKK 264 (471)
Q Consensus 191 yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~~q~~~~~~~a~~~gli~~~~~~~~~~~c~~~~------~~~~~~ 264 (471)
|||.||++|.+.|+....+.|||||++||||++|+..|..++.+|+|.||+|++++++.+.+.|.... .....+
T Consensus 181 YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~ 260 (454)
T KOG1282|consen 181 YVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTK 260 (454)
T ss_pred ehHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhH
Confidence 99999999999997655678999999999999999999999999999999999999999999998742 234678
Q ss_pred HHHHHHHHhh-hhcCCCCcccCCccccCCCCCCCccccccccccccccccCCCCCchhHHHhhcCcHHHHhHcccCCCCC
Q 012068 265 CDDTVNYAMN-HEFGDIDQYSIYTPSCIALPNSTVRPMRLKNTLLRRRVSGYDPCTENYAEKYYNRQEVQKALHANVTGI 343 (471)
Q Consensus 265 c~~~~~~~~~-~~~~~in~y~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~~~~~ylN~~~V~~aL~v~~~~~ 343 (471)
|.++++.+ . ...++++.|+++.+.|...... + +..+....+++|.....+.|||+++||+||||+.+.+
T Consensus 261 C~~~~~~~-~~~~~~~i~~y~i~~~~C~~~~~~--~-------~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~ 330 (454)
T KOG1282|consen 261 CNKAVEEF-DSKTTGDIDNYYILTPDCYPTSYE--L-------KKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSI 330 (454)
T ss_pred HHHHHHHH-HHHHhccCchhhhcchhhcccccc--c-------cccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCC
Confidence 99999988 5 5557899999999999852110 0 0001134568998776699999999999999986543
Q ss_pred CccccccchhhhcccccCCCChHHHHHHHHhcC-ceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeC-Ceeee
Q 012068 344 PYKWTACSDVLINNWKDSEDSVLPTYKQLIAAG-LKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSG-NQVGG 421 (471)
Q Consensus 344 ~~~w~~~s~~v~~~~~~~~~~~~~~l~~LL~~g-irVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~-~~~~G 421 (471)
+ +|+.||..|...|.+...++++.+..++.++ +|||||+||.|++||+.|+++|+++|++....+|+||+++ +|+||
T Consensus 331 ~-~W~~Cn~~v~~~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG 409 (454)
T KOG1282|consen 331 G-KWERCNDEVNYNYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAG 409 (454)
T ss_pred C-cccccChhhhcccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceee
Confidence 4 7999999998888888899999999999965 9999999999999999999999999999999999999995 89999
Q ss_pred EEEEecCeEEEEEcCCccccccCChHHHHHHHHHHHcCCCCCCC
Q 012068 422 WTEVYKGLTFATVRGAGHEVPLFQPRRALILFRSFLAGKQLPKS 465 (471)
Q Consensus 422 ~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~~~~ 465 (471)
|+++|+||+|++|+|||||||.|||+++++||++||.|+++++.
T Consensus 410 ~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~fl~g~~l~~~ 453 (454)
T KOG1282|consen 410 YTKTYGGLTFATVRGAGHMVPYDKPESALIMFQRFLNGQPLPST 453 (454)
T ss_pred eEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHHHHcCCCCCCC
Confidence 99999999999999999999999999999999999999999865
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=3.1e-102 Score=794.84 Aligned_cols=403 Identities=31% Similarity=0.593 Sum_probs=343.4
Q ss_pred ccCccccCCCCCC-CCceeEEeeEEecCCCCceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCC
Q 012068 35 KLDRISALPGQPP-VTFSQFSGYVTVNENHGRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNG 113 (471)
Q Consensus 35 ~~~~v~~lpg~~~-~~~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~ 113 (471)
..++|+.|||++. +++++|||||+|+++.+++||||||||+++|+++||+|||||||||||+ +|+|.|+|||+++.++
T Consensus 21 ~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~~~~~ 99 (437)
T PLN02209 21 SGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCL-SGLFFENGPLALKNKV 99 (437)
T ss_pred ccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHh-hhHHHhcCCceeccCC
Confidence 6788999999853 8899999999998776789999999999999999999999999999999 5999999999998763
Q ss_pred -----CccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccC
Q 012068 114 -----SSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYA 188 (471)
Q Consensus 114 -----~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYg 188 (471)
.++++||+||++.|||||||||+||||||++..... .+++++|+++++||+.||++||+|+++|+||+|||||
T Consensus 100 ~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~--~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYa 177 (437)
T PLN02209 100 YNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIER--TSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYS 177 (437)
T ss_pred CCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCc--cCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcC
Confidence 368999999999999999999999999998766444 2566788999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCcccccccchhhhhccCCCChHHHHHHHhhcccCC---CCChHHH
Q 012068 189 GHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNYYDSIGTVTFWWTHSMISDKTYRSIINHCNFSA---EKSSKKC 265 (471)
Q Consensus 189 G~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~~q~~~~~~~a~~~gli~~~~~~~~~~~c~~~~---~~~~~~c 265 (471)
|||||.+|++|.++|++..+++||||||+|||||+||..|..++.+|++.+|+|++++++.+++.|.... ......|
T Consensus 178 G~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~~~C 257 (437)
T PLN02209 178 GMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSNKKC 257 (437)
T ss_pred ceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCChHHH
Confidence 9999999999999886555678999999999999999999999999999999999999999999997421 1345679
Q ss_pred HHHHHHHhhhhcCCCCcccCCccccCCCCCCCccccccccccccccccCCCCCc---hhHHHhhcCcHHHHhHcccCCCC
Q 012068 266 DDTVNYAMNHEFGDIDQYSIYTPSCIALPNSTVRPMRLKNTLLRRRVSGYDPCT---ENYAEKYYNRQEVQKALHANVTG 342 (471)
Q Consensus 266 ~~~~~~~~~~~~~~in~y~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~dp~~---~~~~~~ylN~~~V~~aL~v~~~~ 342 (471)
.+++... ......++.|++....|...... ....+|. ...+..|||+++||+||||+...
T Consensus 258 ~~~i~~~-~~~~~~~~~~~~~~~~c~~~~~~----------------~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~ 320 (437)
T PLN02209 258 LKLVEEY-HKCTDNINSHHTLIANCDDSNTQ----------------HISPDCYYYPYHLVECWANNESVREALHVDKGS 320 (437)
T ss_pred HHHHHHH-HHHhhcCCccccccccccccccc----------------cCCCCcccccHHHHHHHhCCHHHHHHhCCCCCC
Confidence 9887766 55556678777555557532110 1112453 24578999999999999997422
Q ss_pred CCccccccchhhhcccc-cCCCChHHHHHHHHhcCceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeee
Q 012068 343 IPYKWTACSDVLINNWK-DSEDSVLPTYKQLIAAGLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGG 421 (471)
Q Consensus 343 ~~~~w~~~s~~v~~~~~-~~~~~~~~~l~~LL~~girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G 421 (471)
. ..|..|+..+ .+. |.+ ++.+.+..+|.+|+|||||+||.|++||+.|+++|+++|+|+++++|++|+++++++|
T Consensus 321 ~-~~w~~~~~~~--~~~~d~~-~~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG 396 (437)
T PLN02209 321 I-GEWIRDHRGI--PYKSDIR-SSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAG 396 (437)
T ss_pred C-CCCccccchh--hcccchh-hhHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeee
Confidence 2 2799998654 344 433 3444444555678999999999999999999999999999999999999999999999
Q ss_pred EEEEecC-eEEEEEcCCccccccCChHHHHHHHHHHHcCCCC
Q 012068 422 WTEVYKG-LTFATVRGAGHEVPLFQPRRALILFRSFLAGKQL 462 (471)
Q Consensus 422 ~~k~~~n-Ltf~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~ 462 (471)
|+|+|+| |||++|++|||||| +||++|++||++|+.+++|
T Consensus 397 ~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 397 YTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred EEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHHHHHcCCCC
Confidence 9999996 99999999999998 7999999999999999865
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=8.4e-102 Score=791.70 Aligned_cols=401 Identities=32% Similarity=0.629 Sum_probs=346.5
Q ss_pred ccCccccCCCCC-CCCceeEEeeEEecCCCCceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCC-
Q 012068 35 KLDRISALPGQP-PVTFSQFSGYVTVNENHGRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRN- 112 (471)
Q Consensus 35 ~~~~v~~lpg~~-~~~~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~- 112 (471)
..+.|++|||++ .+++++|||||+|+++.+++||||||||+++|+++||||||||||||||+. |+|.|+|||+++.+
T Consensus 19 ~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~-g~~~e~GP~~~~~~~ 97 (433)
T PLN03016 19 SASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLG-GIIFENGPVGLKFEV 97 (433)
T ss_pred ccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHH-HHHHhcCCceeeccc
Confidence 557899999974 378999999999987667899999999999999999999999999999994 99999999998743
Q ss_pred ----CCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccC
Q 012068 113 ----GSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYA 188 (471)
Q Consensus 113 ----~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYg 188 (471)
+.+++.||+||++.|||||||||+||||||++..... .++++.|+++++||+.||++||+|+++||||+|||||
T Consensus 98 ~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~--~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYa 175 (433)
T PLN03016 98 FNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDK--TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYS 175 (433)
T ss_pred cCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCc--cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCcc
Confidence 2478899999999999999999999999998766543 2566778999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCcccccccchhhhhccCCCChHHHHHHHhhcccCC---CCChHHH
Q 012068 189 GHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNYYDSIGTVTFWWTHSMISDKTYRSIINHCNFSA---EKSSKKC 265 (471)
Q Consensus 189 G~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~~q~~~~~~~a~~~gli~~~~~~~~~~~c~~~~---~~~~~~c 265 (471)
|+|||.+|++|.++|+...+++||||||+||||+++|..|..++.+|+|.+|||++++++.+++.|.... ......|
T Consensus 176 G~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C 255 (433)
T PLN03016 176 GMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQC 255 (433)
T ss_pred ceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHH
Confidence 9999999999999887555678999999999999999999999999999999999999999999997432 1346689
Q ss_pred HHHHHHHhhhhcCCCCcccCCccccCCCCCCCccccccccccccccccCCCCCch---hHHHhhcCcHHHHhHcccCCCC
Q 012068 266 DDTVNYAMNHEFGDIDQYSIYTPSCIALPNSTVRPMRLKNTLLRRRVSGYDPCTE---NYAEKYYNRQEVQKALHANVTG 342 (471)
Q Consensus 266 ~~~~~~~~~~~~~~in~y~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~---~~~~~ylN~~~V~~aL~v~~~~ 342 (471)
..++..+ ....+.+|+||++.+.|..... ..++|.. ..+..|+|+++||+||||+...
T Consensus 256 ~~~~~~~-~~~~~~~n~yni~~~~~~~~~~------------------~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~ 316 (433)
T PLN03016 256 LKLTEEY-HKCTAKINIHHILTPDCDVTNV------------------TSPDCYYYPYHLIECWANDESVREALHIEKGS 316 (433)
T ss_pred HHHHHHH-HHHhcCCChhhccCCccccccc------------------CCCcccccchHHHHHHhCCHHHHHHhCCCCCC
Confidence 9888876 6667889999998766642100 0124542 3678999999999999997421
Q ss_pred CCccccccchhhhcccc-cCCCChHHHHHHHHhcCceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeee
Q 012068 343 IPYKWTACSDVLINNWK-DSEDSVLPTYKQLIAAGLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGG 421 (471)
Q Consensus 343 ~~~~w~~~s~~v~~~~~-~~~~~~~~~l~~LL~~girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G 421 (471)
...|..|+..|. +. |.. +..+.+..++.+|+|||||+||.|++||+.|+++|+++|+|++.++|++|+++++++|
T Consensus 317 -~~~w~~cn~~v~--~~~d~~-~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G 392 (433)
T PLN03016 317 -KGKWARCNRTIP--YNHDIV-SSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAG 392 (433)
T ss_pred -CCCCccCCcccc--cccccc-hhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeee
Confidence 238999999885 43 333 4455555566678999999999999999999999999999999999999999999999
Q ss_pred EEEEecC-eEEEEEcCCccccccCChHHHHHHHHHHHcCCCC
Q 012068 422 WTEVYKG-LTFATVRGAGHEVPLFQPRRALILFRSFLAGKQL 462 (471)
Q Consensus 422 ~~k~~~n-Ltf~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~ 462 (471)
|+|+|+| |||++|++|||||| +||++|++||++|+.++++
T Consensus 393 ~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 393 YTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred EEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHHHHHcCCCC
Confidence 9999986 99999999999998 7999999999999999865
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=5.4e-101 Score=794.26 Aligned_cols=401 Identities=38% Similarity=0.712 Sum_probs=328.5
Q ss_pred CCCCC-CCceeEEeeEEecCCCCceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCC-CCccccCC
Q 012068 43 PGQPP-VTFSQFSGYVTVNENHGRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRN-GSSLYLNK 120 (471)
Q Consensus 43 pg~~~-~~~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~-~~~~~~N~ 120 (471)
||.+. +++++|||||+|+++.+++||||||||+++|+++||||||||||||||| +|+|+|+|||+++.+ ..++++||
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccc
Confidence 67543 7899999999999777899999999999999999999999999999999 599999999999954 36899999
Q ss_pred CCCccCCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHH
Q 012068 121 YSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKII 200 (471)
Q Consensus 121 ~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~ 200 (471)
+||++.|||||||||+||||||+.+...+. ++++++|+++++||+.||++||+|+++|+||+||||||+|||.+|.+|+
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYV-WNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS--SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeecccccccc-chhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 999999999999999999999998876543 4889999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCeeeeeeeEeeccccCcccccccchhhhhccCCCChHHHHHHHhhcccC--CCCChHHHHHHHHHHhhh---
Q 012068 201 DYNSAYSRPIINLKGFIVGNAVTDNYYDSIGTVTFWWTHSMISDKTYRSIINHCNFS--AEKSSKKCDDTVNYAMNH--- 275 (471)
Q Consensus 201 ~~n~~~~~~~inLkGi~IGNg~idp~~q~~~~~~~a~~~gli~~~~~~~~~~~c~~~--~~~~~~~c~~~~~~~~~~--- 275 (471)
++|+.+..+.||||||+|||||+||..|..++.+|+|.+|+|++++++.+.+.|... .......|.++...+ ..
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~-~~~~~ 237 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDEL-SCQYA 237 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHH-HHHCH
T ss_pred hccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhh-hhhcc
Confidence 999765567899999999999999999999999999999999999999999998643 124567899888776 43
Q ss_pred ---hcCCCCcccCCccccCCCCCCCccccccccccccccccCCCCCchhHHHhhcCcHHHHhHcccCCCCCCccccccch
Q 012068 276 ---EFGDIDQYSIYTPSCIALPNSTVRPMRLKNTLLRRRVSGYDPCTENYAEKYYNRQEVQKALHANVTGIPYKWTACSD 352 (471)
Q Consensus 276 ---~~~~in~y~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~~~~~ylN~~~V~~aL~v~~~~~~~~w~~~s~ 352 (471)
..+++|+||++.++|...... .......+++..+.+..|||+++||++|||+... ..+|+.|+.
T Consensus 238 ~~~~~~~~n~Ydi~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~-~~~w~~~~~ 304 (415)
T PF00450_consen 238 ISQCNGGINPYDIRQPCYNPSRSS------------YDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDS-NVNWQSCND 304 (415)
T ss_dssp HHHHHTTSETTSTTSEETT-SHCT------------TCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTT-SSS--SB-H
T ss_pred cccccCCcceeeeecccccccccc------------ccccccccccchhhHHHHhccHHHHHhhCCCccc-CCcccccCc
Confidence 237999999998744310000 0001122344467889999999999999997211 248999999
Q ss_pred hh-hccc-ccCCCChHHHHHHHHhcCceEEEEecCCCcccCchhHHHHHHhCCCCCCCCccccee--CCeeeeEEEEecC
Q 012068 353 VL-INNW-KDSEDSVLPTYKQLIAAGLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYS--GNQVGGWTEVYKG 428 (471)
Q Consensus 353 ~v-~~~~-~~~~~~~~~~l~~LL~~girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~--~~~~~G~~k~~~n 428 (471)
.| +... .+.+.++.+.++.||++++|||||+||+|++||+.|+++|+++|+|+++++|++|.. +++++||+|+++|
T Consensus 305 ~V~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ 384 (415)
T PF00450_consen 305 AVNFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGN 384 (415)
T ss_dssp HHHHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETT
T ss_pred ccccccccccccccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEecc
Confidence 88 3333 377889999999999999999999999999999999999999999999999999977 8899999999999
Q ss_pred eEEEEEcCCccccccCChHHHHHHHHHHHcC
Q 012068 429 LTFATVRGAGHEVPLFQPRRALILFRSFLAG 459 (471)
Q Consensus 429 Ltf~~V~~AGHmvP~dqP~~a~~mi~~fl~~ 459 (471)
|||++|++||||||+|||+++++||++||+|
T Consensus 385 ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 385 LTFVTVRGAGHMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp EEEEEETT--SSHHHHSHHHHHHHHHHHHCT
T ss_pred EEEEEEcCCcccChhhCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999986
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=4.9e-95 Score=750.88 Aligned_cols=383 Identities=28% Similarity=0.564 Sum_probs=335.1
Q ss_pred CCceeEEeeEEecC-CCCceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccC
Q 012068 48 VTFSQFSGYVTVNE-NHGRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSRE 126 (471)
Q Consensus 48 ~~~~~~sGyl~v~~-~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~ 126 (471)
.++++|||||+|++ ..+++||||||||+++|+++||+|||||||||||| +|+|.|||||+++.++.+++.||+||++.
T Consensus 43 ~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~~sW~~~ 121 (462)
T PTZ00472 43 PSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNTYSWNNE 121 (462)
T ss_pred CCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECCcccccc
Confidence 67899999999975 44689999999999999999999999999999999 59999999999999877899999999999
Q ss_pred CceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccC
Q 012068 127 ANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAY 206 (471)
Q Consensus 127 anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~ 206 (471)
+||||||||+||||||+.... +. .+++++|+|+++||+.||++||+++.+|+||+||||||+|+|.+|.+|+++|+.+
T Consensus 122 ~~~l~iDqP~G~G~S~~~~~~-~~-~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~ 199 (462)
T PTZ00472 122 AYVIYVDQPAGVGFSYADKAD-YD-HNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKG 199 (462)
T ss_pred cCeEEEeCCCCcCcccCCCCC-CC-CChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhcccc
Confidence 999999999999999986543 33 4778999999999999999999999999999999999999999999999998765
Q ss_pred CCCeeeeeeeEeeccccCcccccccchhhhhc-------cCCCChHHHHHHHh---hc-------ccCCCCChHHHHHHH
Q 012068 207 SRPIINLKGFIVGNAVTDNYYDSIGTVTFWWT-------HSMISDKTYRSIIN---HC-------NFSAEKSSKKCDDTV 269 (471)
Q Consensus 207 ~~~~inLkGi~IGNg~idp~~q~~~~~~~a~~-------~gli~~~~~~~~~~---~c-------~~~~~~~~~~c~~~~ 269 (471)
.+.+||||||+|||||+||.+|+.++.+|+|. +|+|++++++.+.+ .| ..........|..+.
T Consensus 200 ~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~c~~a~ 279 (462)
T PTZ00472 200 DGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSSCSVAR 279 (462)
T ss_pred CCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHHHH
Confidence 56789999999999999999999999999995 58999999887764 34 321111233465444
Q ss_pred HHHhhh-----hcCCCCcccCCccccCCCCCCCccccccccccccccccCCCCCc-hhHHHhhcCcHHHHhHcccCCCCC
Q 012068 270 NYAMNH-----EFGDIDQYSIYTPSCIALPNSTVRPMRLKNTLLRRRVSGYDPCT-ENYAEKYYNRQEVQKALHANVTGI 343 (471)
Q Consensus 270 ~~~~~~-----~~~~in~y~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~dp~~-~~~~~~ylN~~~V~~aL~v~~~~~ 343 (471)
..| .. ..+++|+||++.+ |.. ++|. ...+..|||+++||+||||+.
T Consensus 280 ~~c-~~~~~~~~~~g~n~Ydi~~~-c~~-----------------------~~c~~~~~~~~yLN~~~Vq~AL~v~~--- 331 (462)
T PTZ00472 280 ALC-NEYIAVYSATGLNNYDIRKP-CIG-----------------------PLCYNMDNTIAFMNREDVQSSLGVKP--- 331 (462)
T ss_pred HHH-HHHHHHHHhcCCChhheecc-CCC-----------------------CCccCHHHHHHHhCCHHHHHHhCCCC---
Confidence 333 21 1367899999975 642 2565 356899999999999999973
Q ss_pred Cccccccchhhhcccc-cCCCChHHHHHHHHhcCceEEEEecCCCcccCchhHHHHHHhCCCCCCC-----Ccccc-eeC
Q 012068 344 PYKWTACSDVLINNWK-DSEDSVLPTYKQLIAAGLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKT-----PWYPW-YSG 416 (471)
Q Consensus 344 ~~~w~~~s~~v~~~~~-~~~~~~~~~l~~LL~~girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~-----~~~~w-~~~ 416 (471)
.+|+.|+..|+.++. |.+.++.+.++.||++|+|||||+||.|++||+.|+++|+++|+|++++ +|++| .++
T Consensus 332 -~~w~~c~~~V~~~~~~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~ 410 (462)
T PTZ00472 332 -ATWQSCNMEVNLMFEMDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVD 410 (462)
T ss_pred -CCceeCCHHHHHHhhhccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecC
Confidence 389999999988887 7778889999999999999999999999999999999999999999976 55799 568
Q ss_pred CeeeeEEEEec-----CeEEEEEcCCccccccCChHHHHHHHHHHHcCCCC
Q 012068 417 NQVGGWTEVYK-----GLTFATVRGAGHEVPLFQPRRALILFRSFLAGKQL 462 (471)
Q Consensus 417 ~~~~G~~k~~~-----nLtf~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~ 462 (471)
++++||+|+++ ||+|++|++||||||.|||+++++|+++|+.++++
T Consensus 411 ~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~~~ 461 (462)
T PTZ00472 411 GRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMDQPAVALTMINRFLRNRPL 461 (462)
T ss_pred CEeceEEEEEecccCCCeEEEEECCCCccChhhHHHHHHHHHHHHHcCCCC
Confidence 89999999999 99999999999999999999999999999999876
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=1e-73 Score=567.68 Aligned_cols=311 Identities=31% Similarity=0.583 Sum_probs=263.8
Q ss_pred CCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhcc
Q 012068 126 EANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSA 205 (471)
Q Consensus 126 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 205 (471)
.|||||||||+||||||+++...+ .+++++|+|+++||+.||++||+|+++||||+||||||||||.+|++|+++|+.
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~--~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~ 78 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK--TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 78 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc--cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence 489999999999999998765544 356677799999999999999999999999999999999999999999998876
Q ss_pred CCCCeeeeeeeEeeccccCcccccccchhhhhccCCCChHHHHHHHhhcccCC---CCChHHHHHHHHHHhhhhcCCCCc
Q 012068 206 YSRPIINLKGFIVGNAVTDNYYDSIGTVTFWWTHSMISDKTYRSIINHCNFSA---EKSSKKCDDTVNYAMNHEFGDIDQ 282 (471)
Q Consensus 206 ~~~~~inLkGi~IGNg~idp~~q~~~~~~~a~~~gli~~~~~~~~~~~c~~~~---~~~~~~c~~~~~~~~~~~~~~in~ 282 (471)
.++++||||||+|||||++|..|..++.+|+|.+|+|++++++.+.+.|.... ......|.++...+ ....+.+|+
T Consensus 79 ~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~-~~~~~~~~~ 157 (319)
T PLN02213 79 CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEY-HKCTAKINI 157 (319)
T ss_pred ccCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHH-HHHHhcCCH
Confidence 55678999999999999999999999999999999999999999999997432 12356799888876 655678899
Q ss_pred ccCCccccCCCCCCCccccccccccccccccCCCCCc---hhHHHhhcCcHHHHhHcccCCCCCCccccccchhhhcccc
Q 012068 283 YSIYTPSCIALPNSTVRPMRLKNTLLRRRVSGYDPCT---ENYAEKYYNRQEVQKALHANVTGIPYKWTACSDVLINNWK 359 (471)
Q Consensus 283 y~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~dp~~---~~~~~~ylN~~~V~~aL~v~~~~~~~~w~~~s~~v~~~~~ 359 (471)
||++.+.|..... ..++|. ...+..|||+++||+||||+... ..+|+.||..|. +.
T Consensus 158 ~~~~~~~~~~~~~------------------~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~c~~~v~--~~ 216 (319)
T PLN02213 158 HHILTPDCDVTNV------------------TSPDCYYYPYHLIECWANDESVREALHIEKGS-KGKWARCNRTIP--YN 216 (319)
T ss_pred hhcccCcccCccC------------------CCCCcccchhHHHHHHhCCHHHHHHhCcCCCC-CCCCccCCcccc--cc
Confidence 9998655642100 012454 24688999999999999997421 238999999885 43
Q ss_pred -cCCCChHHHHHHHHhcCceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecC-eEEEEEcCC
Q 012068 360 -DSEDSVLPTYKQLIAAGLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKG-LTFATVRGA 437 (471)
Q Consensus 360 -~~~~~~~~~l~~LL~~girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~n-Ltf~~V~~A 437 (471)
|.. +..+.+..+|..|+|||||+||.|++||+.|+++|+++|+|+++++|++|+.+++++||+|+|+| |||++|++|
T Consensus 217 ~d~~-~~~~~~~~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~A 295 (319)
T PLN02213 217 HDIV-SSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAG 295 (319)
T ss_pred cccc-cchHHHHHHHhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCC
Confidence 433 34444455556689999999999999999999999999999999999999999999999999986 999999999
Q ss_pred ccccccCChHHHHHHHHHHHcCCCC
Q 012068 438 GHEVPLFQPRRALILFRSFLAGKQL 462 (471)
Q Consensus 438 GHmvP~dqP~~a~~mi~~fl~~~~~ 462 (471)
||||| +||+++++||++||.++++
T Consensus 296 GHmV~-~qP~~al~m~~~fi~~~~~ 319 (319)
T PLN02213 296 GHTAE-YRPNETFIMFQRWISGQPL 319 (319)
T ss_pred CCCCC-cCHHHHHHHHHHHHcCCCC
Confidence 99998 7999999999999999864
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-70 Score=543.58 Aligned_cols=382 Identities=24% Similarity=0.446 Sum_probs=307.7
Q ss_pred ceeEEeeEEecCCCC-----ceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccc-cCCCCC
Q 012068 50 FSQFSGYVTVNENHG-----RALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLY-LNKYSW 123 (471)
Q Consensus 50 ~~~~sGyl~v~~~~~-----~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~-~N~~sW 123 (471)
++.++|.++|.+..+ -.+|||+||++++|+++|+||||||||||||+ +|+|+|+||++|+.+..... +||+||
T Consensus 65 ~~~~~G~lpv~~~~g~~d~ed~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P~~~~NP~SW 143 (498)
T COG2939 65 YPATAGILPVRDYTGYPDAEDFFFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSPSYPDNPGSW 143 (498)
T ss_pred cchhccccchhhccCCcccceeEEEEEecCCCCCCCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCCCCCCCcccc
Confidence 445556665543221 24899999999999999999999999999999 69999999999999842233 699999
Q ss_pred ccCCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCC--ceEEEecccCccchHHHHHHHHH
Q 012068 124 SREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYR--EFYIAGESYAGHYVPQLAKKIID 201 (471)
Q Consensus 124 ~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~--~~yi~GESYgG~yvP~lA~~i~~ 201 (471)
++++||||||||+|||||++..++ .. .+.+.+.+|++.|++.|++.||++.+. |+||+||||||+|+|.||+.|++
T Consensus 144 ~~~adLvFiDqPvGTGfS~a~~~e-~~-~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~ 221 (498)
T COG2939 144 LDFADLVFIDQPVGTGFSRALGDE-KK-KDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLE 221 (498)
T ss_pred ccCCceEEEecCcccCcccccccc-cc-cchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHH
Confidence 999999999999999999973332 22 367789999999999999999999877 99999999999999999999999
Q ss_pred HhccCCCCeeeeeeeEeecc-ccCcccccccchhhhhcc----CCCChHHHHHHHhhcccCC----------CCChHHHH
Q 012068 202 YNSAYSRPIINLKGFIVGNA-VTDNYYDSIGTVTFWWTH----SMISDKTYRSIINHCNFSA----------EKSSKKCD 266 (471)
Q Consensus 202 ~n~~~~~~~inLkGi~IGNg-~idp~~q~~~~~~~a~~~----gli~~~~~~~~~~~c~~~~----------~~~~~~c~ 266 (471)
+|. ..+..+||++++|||| +|+|..|+..+.++|..+ +.++.+.++++.+.|.... ......|.
T Consensus 222 ~~~-~~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~ 300 (498)
T COG2939 222 DNI-ALNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCE 300 (498)
T ss_pred hcc-ccCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHH
Confidence 873 2456799999999999 999999999999998854 5666777888888776421 22345687
Q ss_pred HHHHHHhhhhc------CC---CCcccCCccccCCCCCCCccccccccccccccccCCCCCch--hHHHhhcCcHHHHhH
Q 012068 267 DTVNYAMNHEF------GD---IDQYSIYTPSCIALPNSTVRPMRLKNTLLRRRVSGYDPCTE--NYAEKYYNRQEVQKA 335 (471)
Q Consensus 267 ~~~~~~~~~~~------~~---in~y~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~--~~~~~ylN~~~V~~a 335 (471)
.+...+ .... .+ .|.|+++.. |...... .-|++ ....+|++.+.++++
T Consensus 301 ~~~~~~-~~~~~~~~~r~~~~~~n~y~~r~~-~~d~g~~-------------------~~~y~~~~~~ld~~~~~~~~~~ 359 (498)
T COG2939 301 NASAYL-TGLMREYVGRAGGRLLNVYDIREE-CRDPGLG-------------------GSCYDTLSTSLDYFNFDPEQEV 359 (498)
T ss_pred HHHHHH-Hhcchhhhccccccccccccchhh-cCCCCcc-------------------cccccceeeccccccccchhcc
Confidence 776666 3211 23 788998874 6532110 12332 356678888888888
Q ss_pred cccCCCCCCccccccchhhhcccc----cCCCChHHHHHHHHhcCceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcc
Q 012068 336 LHANVTGIPYKWTACSDVLINNWK----DSEDSVLPTYKQLIAAGLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWY 411 (471)
Q Consensus 336 L~v~~~~~~~~w~~~s~~v~~~~~----~~~~~~~~~l~~LL~~girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~ 411 (471)
+....+ +|..|+.++...|. +.+.+....+..++.+++.+++|.|+.|.+|++.+++.|..+|+|.+...|.
T Consensus 360 ~~~~~d----~~~~c~t~a~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~ 435 (498)
T COG2939 360 NDPEVD----NISGCTTDAMTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYF 435 (498)
T ss_pred cccccc----chhccchHHHHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchh
Confidence 886542 79999999988873 5667778889999999999999999999999999999999999999988664
Q ss_pred -----ccee--CCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHHHHHHcCC
Q 012068 412 -----PWYS--GNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILFRSFLAGK 460 (471)
Q Consensus 412 -----~w~~--~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~~fl~~~ 460 (471)
+|.. ..+..|-+++++|++|++++.||||||+|+|+.+++|++.|+.+.
T Consensus 436 d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~~ 491 (498)
T COG2939 436 DASTPFFWSRLTLEEMGGYKSYRNLTFLRIYEAGHMVPYDRPESSLEMVNLWINGY 491 (498)
T ss_pred hhcCCCcccccchhhcccccccCCceEEEEecCcceeecCChHHHHHHHHHHHhhc
Confidence 3322 446666667888999999999999999999999999999999873
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1e-68 Score=500.03 Aligned_cols=389 Identities=25% Similarity=0.389 Sum_probs=317.1
Q ss_pred EEeeEEecCCCCceEEEEEEEecCC-CCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeE
Q 012068 53 FSGYVTVNENHGRALFYWLTEAASS-ALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILF 131 (471)
Q Consensus 53 ~sGyl~v~~~~~~~lFy~~~es~~~-~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllf 131 (471)
-.||++|+. +.|+|+|+|.+..+ ...+|+.|||+||||+||..||+|.|+||+..+ +++|+++|.+.|+|||
T Consensus 4 ~wg~v~vr~--~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~-----~~~r~~TWlk~adllf 76 (414)
T KOG1283|consen 4 DWGYVDVRT--GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD-----GSPRDWTWLKDADLLF 76 (414)
T ss_pred cccceeeec--CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC-----CCcCCchhhhhccEEE
Confidence 469999986 78999999998754 478999999999999999889999999999886 5679999999999999
Q ss_pred EecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCee
Q 012068 132 LESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPII 211 (471)
Q Consensus 132 iDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~i 211 (471)
||.|||+||||.+....|. ++.+++|.|+.+.|+.||..||||+.+||||+-|||||+.++.+|..+.+..++ .+.+.
T Consensus 77 vDnPVGaGfSyVdg~~~Y~-~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~-G~i~~ 154 (414)
T KOG1283|consen 77 VDNPVGAGFSYVDGSSAYT-TNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKR-GEIKL 154 (414)
T ss_pred ecCCCcCceeeecCccccc-ccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhc-Cceee
Confidence 9999999999999887775 488999999999999999999999999999999999999999999999998876 45789
Q ss_pred eeeeeEeeccccCcccccccchhhhhccCCCChHHHHHHH---hhcccC-C--C-CChHHHH-HHHHHHhhhhcCCCCcc
Q 012068 212 NLKGFIVGNAVTDNYYDSIGTVTFWWTHSMISDKTYRSII---NHCNFS-A--E-KSSKKCD-DTVNYAMNHEFGDIDQY 283 (471)
Q Consensus 212 nLkGi~IGNg~idp~~q~~~~~~~a~~~gli~~~~~~~~~---~~c~~~-~--~-~~~~~c~-~~~~~~~~~~~~~in~y 283 (471)
|+.||++|++||+|..-+.++.+|++..+++++...+... +.|... + . .....|- ..-+.+ ..++.+++.|
T Consensus 155 nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li-~~~sn~VdfY 233 (414)
T KOG1283|consen 155 NFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLI-SRESNGVDFY 233 (414)
T ss_pred cceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcce-eecccCccee
Confidence 9999999999999999999999999999999998876553 233321 0 0 0111122 222223 4556789999
Q ss_pred cCCccccCCCCCCCccccccc----ccc-ccccccCCCCCchhHHHhhcCcHHHHhHcccCCCCCCccccccchhhhccc
Q 012068 284 SIYTPSCIALPNSTVRPMRLK----NTL-LRRRVSGYDPCTENYAEKYYNRQEVQKALHANVTGIPYKWTACSDVLINNW 358 (471)
Q Consensus 284 ~i~~~~c~~~~~~~~~~~~~~----~~~-~~~~~~~~dp~~~~~~~~ylN~~~V~~aL~v~~~~~~~~w~~~s~~v~~~~ 358 (471)
|+..+........+ .++.+ ..| .+... .-+...+.+.+++|.+ ||++|++.++. ..|-..+.+|+.++
T Consensus 234 Nil~~t~~d~~~~s--s~~~~~~~~~~rrl~~~~--~~~~~~D~L~~lM~g~-vrkkLgIip~~--~~wGgqsg~vFt~l 306 (414)
T KOG1283|consen 234 NILTKTLGDQYSLS--SRAAMTPEEVMRRLLVRF--VGDEDRDKLSDLMNGP-VRKKLGIIPGG--VKWGGQSGDVFTKL 306 (414)
T ss_pred eeeccCCCcchhhh--hhhhcchHHHHHHHHhcc--CcchhHHHHHHHhccc-ccccccccCCC--CcccCcCCchHHHh
Confidence 99886443322111 11111 011 00000 0011234688999965 99999998764 48999999998888
Q ss_pred c-cCCCChHHHHHHHHhcCceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcc--cc---eeCCeeeeEEEEecCeEEE
Q 012068 359 K-DSEDSVLPTYKQLIAAGLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWY--PW---YSGNQVGGWTEVYKGLTFA 432 (471)
Q Consensus 359 ~-~~~~~~~~~l~~LL~~girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~--~w---~~~~~~~G~~k~~~nLtf~ 432 (471)
. ++|+|+...+.+||++|++|.||+|++|.||++.|+++|+.+|+|+++..++ +| +++-..+||.|+|+||.|.
T Consensus 307 q~dFMKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl~f~ 386 (414)
T KOG1283|consen 307 QGDFMKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNLSFF 386 (414)
T ss_pred hhhhcccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhccceeE
Confidence 7 9999999999999999999999999999999999999999999999998664 44 3355789999999999999
Q ss_pred EEcCCccccccCChHHHHHHHHHHHc
Q 012068 433 TVRGAGHEVPLFQPRRALILFRSFLA 458 (471)
Q Consensus 433 ~V~~AGHmvP~dqP~~a~~mi~~fl~ 458 (471)
+|..||||||.|+|+.|..|++-+.+
T Consensus 387 wilraghmvp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 387 WILRAGHMVPADNPAAASHMLRHVTK 412 (414)
T ss_pred EeecccCcccCCCHHHHhhheeeccc
Confidence 99999999999999999999987653
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.37 E-value=2.6e-11 Score=115.40 Aligned_cols=116 Identities=20% Similarity=0.241 Sum_probs=79.6
Q ss_pred EEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCC
Q 012068 68 FYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSS 147 (471)
Q Consensus 68 Fy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~ 147 (471)
+|..+.. ..++.|+||+++|.+|++.. |..+.+ . +.+..+++-+|.| |.|.|......
T Consensus 2 ~~~~~~~--~~~~~~~iv~lhG~~~~~~~-~~~~~~-----------~-------l~~~~~vi~~D~~-G~G~S~~~~~~ 59 (257)
T TIGR03611 2 HYELHGP--PDADAPVVVLSSGLGGSGSY-WAPQLD-----------V-------LTQRFHVVTYDHR-GTGRSPGELPP 59 (257)
T ss_pred EEEEecC--CCCCCCEEEEEcCCCcchhH-HHHHHH-----------H-------HHhccEEEEEcCC-CCCCCCCCCcc
Confidence 4554432 23467999999999887776 444332 1 1235799999975 89988643332
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCc
Q 012068 148 NLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDN 225 (471)
Q Consensus 148 ~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp 225 (471)
.+ +.++.++++.+++... ...+++|+|+|+||..+..+|.+..+. ++++++.+|+..+
T Consensus 60 ~~---~~~~~~~~~~~~i~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~~~~----------v~~~i~~~~~~~~ 117 (257)
T TIGR03611 60 GY---SIAHMADDVLQLLDAL-------NIERFHFVGHALGGLIGLQLALRYPER----------LLSLVLINAWSRP 117 (257)
T ss_pred cC---CHHHHHHHHHHHHHHh-------CCCcEEEEEechhHHHHHHHHHHChHH----------hHHheeecCCCCC
Confidence 22 5667777777766532 235799999999999999988765443 8888888876554
No 10
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.30 E-value=4e-10 Score=108.83 Aligned_cols=130 Identities=23% Similarity=0.317 Sum_probs=81.0
Q ss_pred EEeeEEecCCCCceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEE
Q 012068 53 FSGYVTVNENHGRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFL 132 (471)
Q Consensus 53 ~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfi 132 (471)
..++++++ +..+.|.-+. .+...|.||+++||||+++..+..+.+ .+.. +..+++-+
T Consensus 3 ~~~~~~~~---~~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~-----------~l~~------~g~~vi~~ 59 (288)
T TIGR01250 3 IEGIITVD---GGYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLRE-----------LLKE------EGREVIMY 59 (288)
T ss_pred ccceecCC---CCeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHH-----------HHHh------cCCEEEEE
Confidence 35566654 3344444322 223468899999999998752333322 0111 24889999
Q ss_pred ecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeee
Q 012068 133 ESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIIN 212 (471)
Q Consensus 133 DqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~in 212 (471)
|.| |.|.|.......- ..+.++.++++..++.. +..++++|.|+|+||..+..+|....+ .
T Consensus 60 d~~-G~G~s~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~p~----------~ 120 (288)
T TIGR01250 60 DQL-GCGYSDQPDDSDE-LWTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKYGQ----------H 120 (288)
T ss_pred cCC-CCCCCCCCCcccc-cccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhCcc----------c
Confidence 976 9998864322210 02556677776655443 234579999999999999888875422 3
Q ss_pred eeeeEeeccccC
Q 012068 213 LKGFIVGNAVTD 224 (471)
Q Consensus 213 LkGi~IGNg~id 224 (471)
++++++.++...
T Consensus 121 v~~lvl~~~~~~ 132 (288)
T TIGR01250 121 LKGLIISSMLDS 132 (288)
T ss_pred cceeeEeccccc
Confidence 788988887643
No 11
>PHA02857 monoglyceride lipase; Provisional
Probab=99.24 E-value=5.9e-10 Score=108.51 Aligned_cols=123 Identities=15% Similarity=0.132 Sum_probs=82.5
Q ss_pred CceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCcc-CCceeEEecCCCccccC
Q 012068 64 GRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSR-EANILFLESPAGVGFSY 142 (471)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~-~anllfiDqPvGtGfSy 142 (471)
|..|+|..++.. +..+|+||.++|.+++|.. |-.+.+ .+.+ -..++-+|. .|.|.|.
T Consensus 10 g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~-~~~~~~------------------~l~~~g~~via~D~-~G~G~S~ 67 (276)
T PHA02857 10 NDYIYCKYWKPI--TYPKALVFISHGAGEHSGR-YEELAE------------------NISSLGILVFSHDH-IGHGRSN 67 (276)
T ss_pred CCEEEEEeccCC--CCCCEEEEEeCCCccccch-HHHHHH------------------HHHhCCCEEEEccC-CCCCCCC
Confidence 678999888764 2345899999999777766 544432 1333 378999996 5999885
Q ss_pred ccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 143 TNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 143 ~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
..... . .+-....+|+.+++..+.+.+ ...+++|+|+|.||..+..+|.+-.+ +++|+++.+|.
T Consensus 68 ~~~~~-~--~~~~~~~~d~~~~l~~~~~~~---~~~~~~lvG~S~GG~ia~~~a~~~p~----------~i~~lil~~p~ 131 (276)
T PHA02857 68 GEKMM-I--DDFGVYVRDVVQHVVTIKSTY---PGVPVFLLGHSMGATISILAAYKNPN----------LFTAMILMSPL 131 (276)
T ss_pred CccCC-c--CCHHHHHHHHHHHHHHHHhhC---CCCCEEEEEcCchHHHHHHHHHhCcc----------ccceEEEeccc
Confidence 43211 1 133445677777666554444 35689999999999877666643221 38999999987
Q ss_pred cC
Q 012068 223 TD 224 (471)
Q Consensus 223 id 224 (471)
++
T Consensus 132 ~~ 133 (276)
T PHA02857 132 VN 133 (276)
T ss_pred cc
Confidence 65
No 12
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.23 E-value=7.7e-10 Score=108.88 Aligned_cols=124 Identities=13% Similarity=0.096 Sum_probs=85.4
Q ss_pred eeEEecCCCCceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEec
Q 012068 55 GYVTVNENHGRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLES 134 (471)
Q Consensus 55 Gyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDq 134 (471)
=|++++ +..++|.- . .+ ..|.||+|+|.+++|.+ |-.+.+ . +.+.++++.+|.
T Consensus 11 ~~~~~~---~~~i~y~~--~-G~--~~~~vlllHG~~~~~~~-w~~~~~-----------~-------L~~~~~vi~~Dl 63 (294)
T PLN02824 11 RTWRWK---GYNIRYQR--A-GT--SGPALVLVHGFGGNADH-WRKNTP-----------V-------LAKSHRVYAIDL 63 (294)
T ss_pred ceEEEc---CeEEEEEE--c-CC--CCCeEEEECCCCCChhH-HHHHHH-----------H-------HHhCCeEEEEcC
Confidence 366664 45566542 1 21 23789999999999988 565543 1 234569999997
Q ss_pred CCCccccCccCCCCC---CCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCee
Q 012068 135 PAGVGFSYTNTSSNL---KDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPII 211 (471)
Q Consensus 135 PvGtGfSy~~~~~~~---~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~i 211 (471)
| |.|.|...+.... ...+.++.|+++.++|... ...+++|.|+|.||..+-.+|.+..+.
T Consensus 64 p-G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~~--------- 126 (294)
T PLN02824 64 L-GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPEL--------- 126 (294)
T ss_pred C-CCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChhh---------
Confidence 5 8888864332100 0125667788877777654 235899999999999998888776654
Q ss_pred eeeeeEeecccc
Q 012068 212 NLKGFIVGNAVT 223 (471)
Q Consensus 212 nLkGi~IGNg~i 223 (471)
++++++.|+..
T Consensus 127 -v~~lili~~~~ 137 (294)
T PLN02824 127 -VRGVMLINISL 137 (294)
T ss_pred -eeEEEEECCCc
Confidence 89999998764
No 13
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.22 E-value=8.5e-10 Score=106.78 Aligned_cols=108 Identities=18% Similarity=0.098 Sum_probs=74.5
Q ss_pred CCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHH
Q 012068 78 ALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRT 157 (471)
Q Consensus 78 ~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~ 157 (471)
+.+.|.||+++|.+|.+.. |..+.+ .+ .+..+++.+|.| |-|.|....... .+.+..
T Consensus 25 ~~~~~~vv~~hG~~~~~~~-~~~~~~-----------~l-------~~~~~vi~~D~~-G~G~S~~~~~~~---~~~~~~ 81 (278)
T TIGR03056 25 PTAGPLLLLLHGTGASTHS-WRDLMP-----------PL-------ARSFRVVAPDLP-GHGFTRAPFRFR---FTLPSM 81 (278)
T ss_pred CCCCCeEEEEcCCCCCHHH-HHHHHH-----------HH-------hhCcEEEeecCC-CCCCCCCccccC---CCHHHH
Confidence 3456899999999887776 444432 11 224789999975 888886443322 256677
Q ss_pred HHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCc
Q 012068 158 AQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDN 225 (471)
Q Consensus 158 a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp 225 (471)
++++.++++. +..++++|+|+|+||..+..+|.+..+ .++++++.++...+
T Consensus 82 ~~~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~p~----------~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 82 AEDLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDGPV----------TPRMVVGINAALMP 132 (278)
T ss_pred HHHHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhCCc----------ccceEEEEcCcccc
Confidence 8887776653 123578999999999988777754322 37899998887654
No 14
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.19 E-value=1.3e-09 Score=109.28 Aligned_cols=140 Identities=15% Similarity=0.137 Sum_probs=87.3
Q ss_pred ceeEEeeEEecCCCCceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCcc-CCc
Q 012068 50 FSQFSGYVTVNENHGRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSR-EAN 128 (471)
Q Consensus 50 ~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~-~an 128 (471)
.+...+++...+ +..++|+.+.-......+|+||+++|..+.++..+-.+. ..+.+ -.+
T Consensus 30 ~~~~~~~~~~~d--g~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~------------------~~L~~~Gy~ 89 (330)
T PLN02298 30 IKGSKSFFTSPR--GLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTA------------------IFLAQMGFA 89 (330)
T ss_pred CccccceEEcCC--CCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHH------------------HHHHhCCCE
Confidence 344567777643 678888665432222356899999999543321111111 01333 479
Q ss_pred eeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCC
Q 012068 129 ILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSR 208 (471)
Q Consensus 129 llfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~ 208 (471)
|+-+|+| |.|.|..... .. .+.+..++|+..+++.... ..++...+++|+|+|.||..+..+|.+-.
T Consensus 90 V~~~D~r-GhG~S~~~~~--~~-~~~~~~~~D~~~~i~~l~~-~~~~~~~~i~l~GhSmGG~ia~~~a~~~p-------- 156 (330)
T PLN02298 90 CFALDLE-GHGRSEGLRA--YV-PNVDLVVEDCLSFFNSVKQ-REEFQGLPRFLYGESMGGAICLLIHLANP-------- 156 (330)
T ss_pred EEEecCC-CCCCCCCccc--cC-CCHHHHHHHHHHHHHHHHh-cccCCCCCEEEEEecchhHHHHHHHhcCc--------
Confidence 9999985 8888753221 11 2556778898888775443 22334458999999999997766654321
Q ss_pred CeeeeeeeEeeccccC
Q 012068 209 PIINLKGFIVGNAVTD 224 (471)
Q Consensus 209 ~~inLkGi~IGNg~id 224 (471)
-.++|+++.+++..
T Consensus 157 --~~v~~lvl~~~~~~ 170 (330)
T PLN02298 157 --EGFDGAVLVAPMCK 170 (330)
T ss_pred --ccceeEEEeccccc
Confidence 13899999988764
No 15
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.17 E-value=2.6e-09 Score=104.91 Aligned_cols=122 Identities=16% Similarity=0.208 Sum_probs=75.9
Q ss_pred EEeeEEecCCCCceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEE
Q 012068 53 FSGYVTVNENHGRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFL 132 (471)
Q Consensus 53 ~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfi 132 (471)
.+.+++++ +..++|.- .. +.|.||.|+|.|..+.. |-.+.+ .+.+..+++-+
T Consensus 15 ~~~~~~~~---~~~i~y~~---~G---~~~~iv~lHG~~~~~~~-~~~~~~------------------~l~~~~~vi~~ 66 (286)
T PRK03204 15 ESRWFDSS---RGRIHYID---EG---TGPPILLCHGNPTWSFL-YRDIIV------------------ALRDRFRCVAP 66 (286)
T ss_pred cceEEEcC---CcEEEEEE---CC---CCCEEEEECCCCccHHH-HHHHHH------------------HHhCCcEEEEE
Confidence 35678875 44566542 12 34789999999865555 433321 12345899999
Q ss_pred ecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeee
Q 012068 133 ESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIIN 212 (471)
Q Consensus 133 DqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~in 212 (471)
|.| |.|.|-...... .+.+..++++.++++. . ...+++|+|+|+||..+-.+|.+-.+ .
T Consensus 67 D~~-G~G~S~~~~~~~---~~~~~~~~~~~~~~~~----~---~~~~~~lvG~S~Gg~va~~~a~~~p~----------~ 125 (286)
T PRK03204 67 DYL-GFGLSERPSGFG---YQIDEHARVIGEFVDH----L---GLDRYLSMGQDWGGPISMAVAVERAD----------R 125 (286)
T ss_pred CCC-CCCCCCCCCccc---cCHHHHHHHHHHHHHH----h---CCCCEEEEEECccHHHHHHHHHhChh----------h
Confidence 975 888874322211 1445556665555543 2 23579999999999876666654333 2
Q ss_pred eeeeEeecccc
Q 012068 213 LKGFIVGNAVT 223 (471)
Q Consensus 213 LkGi~IGNg~i 223 (471)
+++++++++..
T Consensus 126 v~~lvl~~~~~ 136 (286)
T PRK03204 126 VRGVVLGNTWF 136 (286)
T ss_pred eeEEEEECccc
Confidence 88999887753
No 16
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.15 E-value=7.6e-09 Score=102.30 Aligned_cols=141 Identities=22% Similarity=0.271 Sum_probs=91.6
Q ss_pred ccCccccCCCCCCCCceeEEeeEEecCCCCc--eEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCC
Q 012068 35 KLDRISALPGQPPVTFSQFSGYVTVNENHGR--ALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRN 112 (471)
Q Consensus 35 ~~~~v~~lpg~~~~~~~~~sGyl~v~~~~~~--~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~ 112 (471)
.+.++.+||..+ ..-.|+.++...+. .++|.- ..++ +.|.||.++|.|+.+.. |..+.+
T Consensus 7 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~y~~---~G~~-~~~~lvliHG~~~~~~~-w~~~~~--------- 67 (302)
T PRK00870 7 PDSRFENLPDYP-----FAPHYVDVDDGDGGPLRMHYVD---EGPA-DGPPVLLLHGEPSWSYL-YRKMIP--------- 67 (302)
T ss_pred CcccccCCcCCC-----CCceeEeecCCCCceEEEEEEe---cCCC-CCCEEEEECCCCCchhh-HHHHHH---------
Confidence 556777888654 24567888753333 566652 2333 46889999999888877 544431
Q ss_pred CCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccch
Q 012068 113 GSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYV 192 (471)
Q Consensus 113 ~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yv 192 (471)
.+. .+..+++.+|.| |.|.|....... ..+.++.++++.++|+. +...+++|.|+|+||..+
T Consensus 68 --~L~------~~gy~vi~~Dl~-G~G~S~~~~~~~--~~~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~Gg~ia 129 (302)
T PRK00870 68 --ILA------AAGHRVIAPDLI-GFGRSDKPTRRE--DYTYARHVEWMRSWFEQ-------LDLTDVTLVCQDWGGLIG 129 (302)
T ss_pred --HHH------hCCCEEEEECCC-CCCCCCCCCCcc--cCCHHHHHHHHHHHHHH-------cCCCCEEEEEEChHHHHH
Confidence 111 134799999975 888874322111 12456667776665543 234589999999999999
Q ss_pred HHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 193 PQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 193 P~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
-.+|.+-.+. ++++++.++.
T Consensus 130 ~~~a~~~p~~----------v~~lvl~~~~ 149 (302)
T PRK00870 130 LRLAAEHPDR----------FARLVVANTG 149 (302)
T ss_pred HHHHHhChhh----------eeEEEEeCCC
Confidence 8888765443 8899888764
No 17
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.13 E-value=2.4e-09 Score=108.30 Aligned_cols=127 Identities=13% Similarity=0.172 Sum_probs=82.2
Q ss_pred CceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCcc-CCceeEEecCCCccccC
Q 012068 64 GRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSR-EANILFLESPAGVGFSY 142 (471)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~-~anllfiDqPvGtGfSy 142 (471)
|..+|+..+...+ .+.+|+||+++|..+.++..+-.+.+ .+.+ -.+++-+|.| |.|.|.
T Consensus 71 g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~~~~~~~------------------~l~~~g~~v~~~D~~-G~G~S~ 130 (349)
T PLN02385 71 GVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFFFEGIAR------------------KIASSGYGVFAMDYP-GFGLSE 130 (349)
T ss_pred CCEEEEEEEecCC-CCCCeEEEEECCCCCccchHHHHHHH------------------HHHhCCCEEEEecCC-CCCCCC
Confidence 6678887665322 24569999999986665541111111 1222 4789999986 888885
Q ss_pred ccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 143 TNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 143 ~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
.... +. .+.+..++|+.++++.. ...+++...+++|.|+|+||..+..+|.+-.+ .++|+++.+|.
T Consensus 131 ~~~~--~~-~~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~----------~v~glVLi~p~ 196 (349)
T PLN02385 131 GLHG--YI-PSFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLKQPN----------AWDGAILVAPM 196 (349)
T ss_pred CCCC--Cc-CCHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHhCcc----------hhhheeEeccc
Confidence 4321 11 14566788888877653 33345556689999999999887776654322 27999999876
Q ss_pred cC
Q 012068 223 TD 224 (471)
Q Consensus 223 id 224 (471)
..
T Consensus 197 ~~ 198 (349)
T PLN02385 197 CK 198 (349)
T ss_pred cc
Confidence 43
No 18
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.13 E-value=2.1e-09 Score=103.05 Aligned_cols=104 Identities=16% Similarity=0.158 Sum_probs=77.5
Q ss_pred CCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcH
Q 012068 76 SSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDN 155 (471)
Q Consensus 76 ~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~ 155 (471)
+++.+.|.||+++|.+|.+.. |..+.+ . +.+..+++.+|+| |-|.|... .. .+.+
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~-~~~~~~-----------~-------l~~~~~vi~~D~~-G~G~s~~~--~~---~~~~ 65 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDN-LGVLAR-----------D-------LVNDHDIIQVDMR-NHGLSPRD--PV---MNYP 65 (255)
T ss_pred CCCCCCCCEEEECCCCCchhH-HHHHHH-----------H-------HhhCCeEEEECCC-CCCCCCCC--CC---CCHH
Confidence 456678999999999998877 555543 1 2345799999976 88887532 22 2567
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeecc
Q 012068 156 RTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNA 221 (471)
Q Consensus 156 ~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg 221 (471)
+.++|+.++|..+ .-++++|.|+|.||..+..+|.+..+. ++++++.++
T Consensus 66 ~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~~----------v~~lvli~~ 114 (255)
T PRK10673 66 AMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAPDR----------IDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCHhh----------cceEEEEec
Confidence 7888988887653 234799999999999999998775554 888888764
No 19
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.11 E-value=1.5e-09 Score=106.77 Aligned_cols=115 Identities=15% Similarity=0.144 Sum_probs=80.6
Q ss_pred CceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCc
Q 012068 64 GRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYT 143 (471)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~ 143 (471)
+..++|.-. .+.|.||+++|.|+.+.. |-.+.+ . +.+...++-+|.| |-|.|..
T Consensus 16 g~~i~y~~~------G~g~~vvllHG~~~~~~~-w~~~~~-----------~-------L~~~~~via~D~~-G~G~S~~ 69 (295)
T PRK03592 16 GSRMAYIET------GEGDPIVFLHGNPTSSYL-WRNIIP-----------H-------LAGLGRCLAPDLI-GMGASDK 69 (295)
T ss_pred CEEEEEEEe------CCCCEEEEECCCCCCHHH-HHHHHH-----------H-------HhhCCEEEEEcCC-CCCCCCC
Confidence 456666521 134789999999998887 554432 1 2334589999975 8888853
Q ss_pred cCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeecccc
Q 012068 144 NTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVT 223 (471)
Q Consensus 144 ~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~i 223 (471)
.. .. .+.+..|+|+..+++.. ...+++|.|+|.||..+-.+|.+..+. ++++++.|+.+
T Consensus 70 ~~-~~---~~~~~~a~dl~~ll~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~p~~----------v~~lil~~~~~ 128 (295)
T PRK03592 70 PD-ID---YTFADHARYLDAWFDAL-------GLDDVVLVGHDWGSALGFDWAARHPDR----------VRGIAFMEAIV 128 (295)
T ss_pred CC-CC---CCHHHHHHHHHHHHHHh-------CCCCeEEEEECHHHHHHHHHHHhChhh----------eeEEEEECCCC
Confidence 32 22 25666777777766542 235899999999999988888766554 89999999865
Q ss_pred Cc
Q 012068 224 DN 225 (471)
Q Consensus 224 dp 225 (471)
.+
T Consensus 129 ~~ 130 (295)
T PRK03592 129 RP 130 (295)
T ss_pred CC
Confidence 44
No 20
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.08 E-value=7.4e-09 Score=100.70 Aligned_cols=138 Identities=14% Similarity=0.198 Sum_probs=92.6
Q ss_pred CCceeEEeeEEecCCCCceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCC
Q 012068 48 VTFSQFSGYVTVNENHGRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREA 127 (471)
Q Consensus 48 ~~~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~a 127 (471)
+..+--+-|+.+.+. .. =|.++-...+++.+-++.++|= |++++ +|. .|=.+..+..
T Consensus 61 ~~v~~~~~~v~i~~~--~~--iw~~~~~~~~~~~~plVliHGy-GAg~g---~f~---------------~Nf~~La~~~ 117 (365)
T KOG4409|consen 61 VPVPYSKKYVRIPNG--IE--IWTITVSNESANKTPLVLIHGY-GAGLG---LFF---------------RNFDDLAKIR 117 (365)
T ss_pred cCCCcceeeeecCCC--ce--eEEEeecccccCCCcEEEEecc-chhHH---HHH---------------HhhhhhhhcC
Confidence 334444667777632 22 2333333444677777889964 55543 222 2333456689
Q ss_pred ceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCC
Q 012068 128 NILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYS 207 (471)
Q Consensus 128 nllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~ 207 (471)
||-.||+| |-|+|.-.. -.. +.+.+-+.+.+-+++|..+.. =.+.+|.|||+||......|.+-.++
T Consensus 118 ~vyaiDll-G~G~SSRP~-F~~---d~~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlKyPer----- 184 (365)
T KOG4409|consen 118 NVYAIDLL-GFGRSSRPK-FSI---DPTTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALKYPER----- 184 (365)
T ss_pred ceEEeccc-CCCCCCCCC-CCC---CcccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHhChHh-----
Confidence 99999976 777774322 211 334455688899999998763 34899999999999999999888877
Q ss_pred CCeeeeeeeEeeccccCcc
Q 012068 208 RPIINLKGFIVGNAVTDNY 226 (471)
Q Consensus 208 ~~~inLkGi~IGNg~idp~ 226 (471)
++-++|.+||--|+
T Consensus 185 -----V~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 185 -----VEKLILVSPWGFPE 198 (365)
T ss_pred -----hceEEEeccccccc
Confidence 78899999987665
No 21
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.07 E-value=2e-08 Score=102.06 Aligned_cols=103 Identities=17% Similarity=0.136 Sum_probs=69.4
Q ss_pred CCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHHHH
Q 012068 80 KKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQ 159 (471)
Q Consensus 80 ~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~ 159 (471)
+.|.||.|+|.|+.+.. |..+.+ ...+...++-+|.| |.|.|....... .+.+..++
T Consensus 87 ~gp~lvllHG~~~~~~~-w~~~~~------------------~L~~~~~via~Dl~-G~G~S~~~~~~~---~~~~~~a~ 143 (360)
T PLN02679 87 SGPPVLLVHGFGASIPH-WRRNIG------------------VLAKNYTVYAIDLL-GFGASDKPPGFS---YTMETWAE 143 (360)
T ss_pred CCCeEEEECCCCCCHHH-HHHHHH------------------HHhcCCEEEEECCC-CCCCCCCCCCcc---ccHHHHHH
Confidence 34788999999988877 544432 12345799999986 888774322222 25567778
Q ss_pred HHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHH-HHHHhccCCCCeeeeeeeEeeccc
Q 012068 160 DALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKK-IIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 160 d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~-i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
++.++|... ...+++|.|+|+||..+-.+|.+ -.+. ++|+++.|+.
T Consensus 144 ~l~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~~P~r----------V~~LVLi~~~ 190 (360)
T PLN02679 144 LILDFLEEV-------VQKPTVLIGNSVGSLACVIAASESTRDL----------VRGLVLLNCA 190 (360)
T ss_pred HHHHHHHHh-------cCCCeEEEEECHHHHHHHHHHHhcChhh----------cCEEEEECCc
Confidence 877777642 23589999999999765555532 1222 8999998875
No 22
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.06 E-value=4.9e-08 Score=95.03 Aligned_cols=59 Identities=20% Similarity=0.138 Sum_probs=51.4
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILFRS 455 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~~ 455 (471)
.++||+..|..|.+++...++.+...+. +..++.|.+|||+++.++|+...++|.+
T Consensus 223 ~~Pvlli~G~~D~~v~~~~~~~~~~~~~------------------------~~~~~~i~~agH~~~~e~p~~~~~~i~~ 278 (282)
T TIGR03343 223 KAKTLVTWGRDDRFVPLDHGLKLLWNMP------------------------DAQLHVFSRCGHWAQWEHADAFNRLVID 278 (282)
T ss_pred CCCEEEEEccCCCcCCchhHHHHHHhCC------------------------CCEEEEeCCCCcCCcccCHHHHHHHHHH
Confidence 5899999999999999877777666642 4557889999999999999999999999
Q ss_pred HHc
Q 012068 456 FLA 458 (471)
Q Consensus 456 fl~ 458 (471)
|+.
T Consensus 279 fl~ 281 (282)
T TIGR03343 279 FLR 281 (282)
T ss_pred Hhh
Confidence 985
No 23
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.06 E-value=1.8e-08 Score=94.91 Aligned_cols=59 Identities=31% Similarity=0.421 Sum_probs=50.6
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILFRS 455 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~~ 455 (471)
.+||++.+|+.|.++|....+.+.+.+. +.+++.+.++||+++.++|+...+.+++
T Consensus 193 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 248 (251)
T TIGR02427 193 AVPTLCIAGDQDGSTPPELVREIADLVP------------------------GARFAEIRGAGHIPCVEQPEAFNAALRD 248 (251)
T ss_pred CCCeEEEEeccCCcCChHHHHHHHHhCC------------------------CceEEEECCCCCcccccChHHHHHHHHH
Confidence 5899999999999999987777666643 3347888999999999999999999999
Q ss_pred HHc
Q 012068 456 FLA 458 (471)
Q Consensus 456 fl~ 458 (471)
|+.
T Consensus 249 fl~ 251 (251)
T TIGR02427 249 FLR 251 (251)
T ss_pred HhC
Confidence 974
No 24
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.04 E-value=1.1e-08 Score=99.77 Aligned_cols=117 Identities=19% Similarity=0.156 Sum_probs=79.5
Q ss_pred CceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCc
Q 012068 64 GRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYT 143 (471)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~ 143 (471)
+..+.||..+- . ...|.||+++|-++.+.. |..+.+ . ..+..+++-+|.| |.|.|-.
T Consensus 11 ~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~-w~~~~~-----------~-------L~~~~~vi~~Dl~-G~G~S~~ 67 (276)
T TIGR02240 11 GQSIRTAVRPG--K-EGLTPLLIFNGIGANLEL-VFPFIE-----------A-------LDPDLEVIAFDVP-GVGGSST 67 (276)
T ss_pred CcEEEEEEecC--C-CCCCcEEEEeCCCcchHH-HHHHHH-----------H-------hccCceEEEECCC-CCCCCCC
Confidence 45688876432 2 244678999987666666 544432 1 1245799999975 8888853
Q ss_pred cCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeecccc
Q 012068 144 NTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVT 223 (471)
Q Consensus 144 ~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~i 223 (471)
.. .. .+.+..++++.++|... .-.+++|.|+|+||..+-.+|.+-.+. ++++++.|+..
T Consensus 68 ~~-~~---~~~~~~~~~~~~~i~~l-------~~~~~~LvG~S~GG~va~~~a~~~p~~----------v~~lvl~~~~~ 126 (276)
T TIGR02240 68 PR-HP---YRFPGLAKLAARMLDYL-------DYGQVNAIGVSWGGALAQQFAHDYPER----------CKKLILAATAA 126 (276)
T ss_pred CC-Cc---CcHHHHHHHHHHHHHHh-------CcCceEEEEECHHHHHHHHHHHHCHHH----------hhheEEeccCC
Confidence 22 22 24556677776666552 234899999999999988888765554 89999999875
Q ss_pred C
Q 012068 224 D 224 (471)
Q Consensus 224 d 224 (471)
.
T Consensus 127 ~ 127 (276)
T TIGR02240 127 G 127 (276)
T ss_pred c
Confidence 4
No 25
>PLN02578 hydrolase
Probab=99.01 E-value=3.8e-08 Score=99.79 Aligned_cols=112 Identities=13% Similarity=0.144 Sum_probs=75.7
Q ss_pred CceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCc
Q 012068 64 GRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYT 143 (471)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~ 143 (471)
+.+++|.-.. +.|-||.++|-++.+.. |....+ . +.+..+++.+|.| |.|.|..
T Consensus 75 ~~~i~Y~~~g------~g~~vvliHG~~~~~~~-w~~~~~-----------~-------l~~~~~v~~~D~~-G~G~S~~ 128 (354)
T PLN02578 75 GHKIHYVVQG------EGLPIVLIHGFGASAFH-WRYNIP-----------E-------LAKKYKVYALDLL-GFGWSDK 128 (354)
T ss_pred CEEEEEEEcC------CCCeEEEECCCCCCHHH-HHHHHH-----------H-------HhcCCEEEEECCC-CCCCCCC
Confidence 4567765321 23557899987665555 433321 1 2345899999986 8887753
Q ss_pred cCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 144 NTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 144 ~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
.. ..+ +.+..++++.+|++... ..+++|.|+|+||..+..+|.+..+. ++++++.|+.
T Consensus 129 ~~-~~~---~~~~~a~~l~~~i~~~~-------~~~~~lvG~S~Gg~ia~~~A~~~p~~----------v~~lvLv~~~ 186 (354)
T PLN02578 129 AL-IEY---DAMVWRDQVADFVKEVV-------KEPAVLVGNSLGGFTALSTAVGYPEL----------VAGVALLNSA 186 (354)
T ss_pred cc-ccc---CHHHHHHHHHHHHHHhc-------cCCeEEEEECHHHHHHHHHHHhChHh----------cceEEEECCC
Confidence 32 222 55667788877776543 35899999999999988888876554 8999998864
No 26
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.99 E-value=5.4e-08 Score=99.28 Aligned_cols=109 Identities=17% Similarity=0.137 Sum_probs=73.1
Q ss_pred CCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHH
Q 012068 78 ALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRT 157 (471)
Q Consensus 78 ~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~ 157 (471)
+.+.|.||.++|.|+.+.. |-.+.+ . ..+..+++-+|.| |.|+|.......-...+.++.
T Consensus 124 ~~~~~~ivllHG~~~~~~~-w~~~~~-----------~-------L~~~~~Via~Dlp-G~G~S~~p~~~~~~~ys~~~~ 183 (383)
T PLN03084 124 SNNNPPVLLIHGFPSQAYS-YRKVLP-----------V-------LSKNYHAIAFDWL-GFGFSDKPQPGYGFNYTLDEY 183 (383)
T ss_pred CCCCCeEEEECCCCCCHHH-HHHHHH-----------H-------HhcCCEEEEECCC-CCCCCCCCcccccccCCHHHH
Confidence 3456899999999988776 444432 1 2335799999975 888886433210001255667
Q ss_pred HHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeecccc
Q 012068 158 AQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVT 223 (471)
Q Consensus 158 a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~i 223 (471)
++++.++|+.. ...+++|+|+|+||..+-.+|.+..+. ++++++.|+..
T Consensus 184 a~~l~~~i~~l-------~~~~~~LvG~s~GG~ia~~~a~~~P~~----------v~~lILi~~~~ 232 (383)
T PLN03084 184 VSSLESLIDEL-------KSDKVSLVVQGYFSPPVVKYASAHPDK----------IKKLILLNPPL 232 (383)
T ss_pred HHHHHHHHHHh-------CCCCceEEEECHHHHHHHHHHHhChHh----------hcEEEEECCCC
Confidence 77777777653 234799999999997666666544333 89999999764
No 27
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.95 E-value=3e-08 Score=95.33 Aligned_cols=59 Identities=14% Similarity=0.064 Sum_probs=50.0
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILFRS 455 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~~ 455 (471)
.++|||.+|..|.++|....+...+.+ +|..++.+.++||+++.++|+...+.+.+
T Consensus 196 ~~P~lii~G~~D~~~~~~~~~~~~~~i------------------------~~~~~~~i~~~gH~~~~e~p~~f~~~l~~ 251 (256)
T PRK10349 196 SMPFLRLYGYLDGLVPRKVVPMLDKLW------------------------PHSESYIFAKAAHAPFISHPAEFCHLLVA 251 (256)
T ss_pred CCCeEEEecCCCccCCHHHHHHHHHhC------------------------CCCeEEEeCCCCCCccccCHHHHHHHHHH
Confidence 599999999999999987766555553 24458899999999999999999999999
Q ss_pred HHc
Q 012068 456 FLA 458 (471)
Q Consensus 456 fl~ 458 (471)
|-+
T Consensus 252 ~~~ 254 (256)
T PRK10349 252 LKQ 254 (256)
T ss_pred Hhc
Confidence 864
No 28
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.92 E-value=1e-08 Score=94.71 Aligned_cols=103 Identities=22% Similarity=0.304 Sum_probs=72.8
Q ss_pred EEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHH
Q 012068 84 VLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALV 163 (471)
Q Consensus 84 ilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~ 163 (471)
||+++|.+|.+.. |..+.+ .+ .+..+++.+|.| |.|.|..... +...+.++.++++.+
T Consensus 1 vv~~hG~~~~~~~-~~~~~~-----------~l-------~~~~~v~~~d~~-G~G~s~~~~~--~~~~~~~~~~~~l~~ 58 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WDPLAE-----------AL-------ARGYRVIAFDLP-GHGRSDPPPD--YSPYSIEDYAEDLAE 58 (228)
T ss_dssp EEEE-STTTTGGG-GHHHHH-----------HH-------HTTSEEEEEECT-TSTTSSSHSS--GSGGSHHHHHHHHHH
T ss_pred eEEECCCCCCHHH-HHHHHH-----------HH-------hCCCEEEEEecC-Cccccccccc--cCCcchhhhhhhhhh
Confidence 7899999999877 555543 12 156789999976 8898875442 111255666777666
Q ss_pred HHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCc
Q 012068 164 FLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDN 225 (471)
Q Consensus 164 fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp 225 (471)
+|+. .. .++++|.|+|+||..+..+|.+..+. ++|+++.++....
T Consensus 59 ~l~~----~~---~~~~~lvG~S~Gg~~a~~~a~~~p~~----------v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 59 LLDA----LG---IKKVILVGHSMGGMIALRLAARYPDR----------VKGLVLLSPPPPL 103 (228)
T ss_dssp HHHH----TT---TSSEEEEEETHHHHHHHHHHHHSGGG----------EEEEEEESESSSH
T ss_pred cccc----cc---cccccccccccccccccccccccccc----------cccceeecccccc
Confidence 6544 22 25899999999999998888764442 9999999988754
No 29
>PRK06489 hypothetical protein; Provisional
Probab=98.89 E-value=1.7e-07 Score=95.17 Aligned_cols=141 Identities=16% Similarity=0.160 Sum_probs=80.3
Q ss_pred CceeEEeeEEecCCCCceEEEEEEEec---CCCCCCCeEEEECCCCChhhhhhh--hhhhcCCeEEcCCCCccc-cCCCC
Q 012068 49 TFSQFSGYVTVNENHGRALFYWLTEAA---SSALKKPLVLWLNGGPGCSSVAYG--ASEEIGPFRINRNGSSLY-LNKYS 122 (471)
Q Consensus 49 ~~~~~sGyl~v~~~~~~~lFy~~~es~---~~~~~~PlilWlnGGPG~SS~~~g--~f~e~GP~~~~~~~~~~~-~N~~s 122 (471)
++...+|. .++ +..++|.-+-.. .++++.|.||.++|++|.+.. |- .+.+ .+. ....-
T Consensus 38 ~~~~~~~~-~~~---g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~-~~~~~~~~-----------~l~~~~~~l 101 (360)
T PRK06489 38 DFTFHSGE-TLP---ELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKS-FLSPTFAG-----------ELFGPGQPL 101 (360)
T ss_pred ceeccCCC-CcC---CceEEEEecCCCCcccccCCCCeEEEeCCCCCchhh-hccchhHH-----------HhcCCCCcc
Confidence 45566775 332 456777643210 012236889999999887665 21 1100 000 00001
Q ss_pred CccCCceeEEecCCCccccCccCCC---CCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCce-EEEecccCccchHHHHHH
Q 012068 123 WSREANILFLESPAGVGFSYTNTSS---NLKDSGDNRTAQDALVFLIRWMSRFPQYKYREF-YIAGESYAGHYVPQLAKK 198 (471)
Q Consensus 123 W~~~anllfiDqPvGtGfSy~~~~~---~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~-yi~GESYgG~yvP~lA~~ 198 (471)
-.+..++|.+|.| |.|.|...... .+...+.++.++++.+++.+-+ .-.++ +|+|+|+||..+-.+|.+
T Consensus 102 ~~~~~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~l------gi~~~~~lvG~SmGG~vAl~~A~~ 174 (360)
T PRK06489 102 DASKYFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGL------GVKHLRLILGTSMGGMHAWMWGEK 174 (360)
T ss_pred cccCCEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhc------CCCceeEEEEECHHHHHHHHHHHh
Confidence 1356899999986 88888532211 0011244556666555443211 22355 489999999988888877
Q ss_pred HHHHhccCCCCeeeeeeeEeeccc
Q 012068 199 IIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 199 i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
-.+. ++++++.++.
T Consensus 175 ~P~~----------V~~LVLi~s~ 188 (360)
T PRK06489 175 YPDF----------MDALMPMASQ 188 (360)
T ss_pred Cchh----------hheeeeeccC
Confidence 6554 7888887764
No 30
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.87 E-value=3.3e-07 Score=95.71 Aligned_cols=133 Identities=15% Similarity=0.114 Sum_probs=83.9
Q ss_pred ceeEEeeEEecCCCCceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhh-hhhcCCeEEcCCCCccccCCCCCccCCc
Q 012068 50 FSQFSGYVTVNENHGRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGA-SEEIGPFRINRNGSSLYLNKYSWSREAN 128 (471)
Q Consensus 50 ~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~-f~e~GP~~~~~~~~~~~~N~~sW~~~an 128 (471)
.+.-.-|++.+ +..|||+...... +...|.||+++|.+|.+.+ |.. +.+ .+.. .+.+...
T Consensus 174 ~~~~~~~~~~~---~~~l~~~~~gp~~-~~~k~~VVLlHG~~~s~~~-W~~~~~~-----------~L~~---~~~~~yr 234 (481)
T PLN03087 174 CKFCTSWLSSS---NESLFVHVQQPKD-NKAKEDVLFIHGFISSSAF-WTETLFP-----------NFSD---AAKSTYR 234 (481)
T ss_pred cceeeeeEeeC---CeEEEEEEecCCC-CCCCCeEEEECCCCccHHH-HHHHHHH-----------HHHH---HhhCCCE
Confidence 34445677664 3578888654432 2234789999999999887 442 110 0111 2355789
Q ss_pred eeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCC
Q 012068 129 ILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSR 208 (471)
Q Consensus 129 llfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~ 208 (471)
++.+|.| |.|.|....... .+.++.++++. +.+++.. ...+++|.|+|+||..+-.+|.+..+.
T Consensus 235 Via~Dl~-G~G~S~~p~~~~---ytl~~~a~~l~---~~ll~~l---g~~k~~LVGhSmGG~iAl~~A~~~Pe~------ 298 (481)
T PLN03087 235 LFAVDLL-GFGRSPKPADSL---YTLREHLEMIE---RSVLERY---KVKSFHIVAHSLGCILALALAVKHPGA------ 298 (481)
T ss_pred EEEECCC-CCCCCcCCCCCc---CCHHHHHHHHH---HHHHHHc---CCCCEEEEEECHHHHHHHHHHHhChHh------
Confidence 9999986 777774322222 24455555553 1233332 345899999999999998888765553
Q ss_pred CeeeeeeeEeecc
Q 012068 209 PIINLKGFIVGNA 221 (471)
Q Consensus 209 ~~inLkGi~IGNg 221 (471)
++++++.++
T Consensus 299 ----V~~LVLi~~ 307 (481)
T PLN03087 299 ----VKSLTLLAP 307 (481)
T ss_pred ----ccEEEEECC
Confidence 788888876
No 31
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.87 E-value=1.3e-07 Score=95.96 Aligned_cols=103 Identities=17% Similarity=0.190 Sum_probs=69.4
Q ss_pred CCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHHH
Q 012068 79 LKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTA 158 (471)
Q Consensus 79 ~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a 158 (471)
.+.|.+|+++|.+|++.. |..+.+ .+ .+..+++-+|.| |.|.|-..... .+.++.+
T Consensus 129 ~~~~~vl~~HG~~~~~~~-~~~~~~-----------~l-------~~~~~v~~~d~~-g~G~s~~~~~~----~~~~~~~ 184 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNN-WLFNHA-----------AL-------AAGRPVIALDLP-GHGASSKAVGA----GSLDELA 184 (371)
T ss_pred CCCCeEEEECCCCCccch-HHHHHH-----------HH-------hcCCEEEEEcCC-CCCCCCCCCCC----CCHHHHH
Confidence 456889999999888877 454443 11 123789999975 88887432211 2455666
Q ss_pred HHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 159 QDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 159 ~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
+++.++++. +...+++|.|+|+||..+..+|.+-.+ .++++++.++.
T Consensus 185 ~~~~~~~~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~~~----------~v~~lv~~~~~ 231 (371)
T PRK14875 185 AAVLAFLDA-------LGIERAHLVGHSMGGAVALRLAARAPQ----------RVASLTLIAPA 231 (371)
T ss_pred HHHHHHHHh-------cCCccEEEEeechHHHHHHHHHHhCch----------heeEEEEECcC
Confidence 666655543 233579999999999999888875332 27788877664
No 32
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.87 E-value=1.5e-07 Score=88.39 Aligned_cols=58 Identities=16% Similarity=0.118 Sum_probs=49.3
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILFRS 455 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~~ 455 (471)
..+||+.+|..|.+++....+.+.+.+. +-++..+.++||+++.++|+...+.|.+
T Consensus 188 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 243 (245)
T TIGR01738 188 SVPFLRLYGYLDGLVPAKVVPYLDKLAP------------------------HSELYIFAKAAHAPFLSHAEAFCALLVA 243 (245)
T ss_pred CCCEEEEeecCCcccCHHHHHHHHHhCC------------------------CCeEEEeCCCCCCccccCHHHHHHHHHh
Confidence 5899999999999999887776655542 3347788999999999999999999999
Q ss_pred HH
Q 012068 456 FL 457 (471)
Q Consensus 456 fl 457 (471)
|+
T Consensus 244 fi 245 (245)
T TIGR01738 244 FK 245 (245)
T ss_pred hC
Confidence 85
No 33
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.84 E-value=3.1e-07 Score=94.20 Aligned_cols=127 Identities=20% Similarity=0.171 Sum_probs=83.1
Q ss_pred CceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCc
Q 012068 64 GRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYT 143 (471)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~ 143 (471)
+..+|++.++... .+.+|+||+++|.++.+.. |-.+.+ .+. .+-.+++-+|.| |-|.|..
T Consensus 120 ~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~-~~~~a~-----------~L~------~~Gy~V~~~D~r-GhG~S~~ 179 (395)
T PLN02652 120 RNALFCRSWAPAA-GEMRGILIIIHGLNEHSGR-YLHFAK-----------QLT------SCGFGVYAMDWI-GHGGSDG 179 (395)
T ss_pred CCEEEEEEecCCC-CCCceEEEEECCchHHHHH-HHHHHH-----------HHH------HCCCEEEEeCCC-CCCCCCC
Confidence 4567777776532 3446899999999877765 443332 111 234689999975 8887754
Q ss_pred cCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeecccc
Q 012068 144 NTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVT 223 (471)
Q Consensus 144 ~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~i 223 (471)
... +. .+.+..++|+.++++..-..+| ..+++|+|+|+||..+..+|. +.+ ..-.++|+++.+|++
T Consensus 180 ~~~--~~-~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p~----~~~~v~glVL~sP~l 245 (395)
T PLN02652 180 LHG--YV-PSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YPS----IEDKLEGIVLTSPAL 245 (395)
T ss_pred CCC--CC-cCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----ccC----cccccceEEEECccc
Confidence 322 21 2455677888888877665555 348999999999987765543 110 112488999998876
Q ss_pred C
Q 012068 224 D 224 (471)
Q Consensus 224 d 224 (471)
.
T Consensus 246 ~ 246 (395)
T PLN02652 246 R 246 (395)
T ss_pred c
Confidence 4
No 34
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.83 E-value=2.6e-07 Score=95.24 Aligned_cols=109 Identities=13% Similarity=0.171 Sum_probs=71.2
Q ss_pred CCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHHH
Q 012068 79 LKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTA 158 (471)
Q Consensus 79 ~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a 158 (471)
.+.|.||.++|.++.+.. |....+ . +.+..+++-+|.| |.|.|... ...+ .+.+++.
T Consensus 103 ~~~p~vvllHG~~~~~~~-~~~~~~-----------~-------L~~~~~vi~~D~r-G~G~S~~~-~~~~--~~~~~~~ 159 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGF-FFRNFD-----------A-------LASRFRVIAIDQL-GWGGSSRP-DFTC--KSTEETE 159 (402)
T ss_pred CCCCEEEEECCCCcchhH-HHHHHH-----------H-------HHhCCEEEEECCC-CCCCCCCC-Cccc--ccHHHHH
Confidence 467999999999877666 332211 1 2334789999975 88877422 1111 1233444
Q ss_pred HHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeecccc
Q 012068 159 QDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVT 223 (471)
Q Consensus 159 ~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~i 223 (471)
+.+.+.+.+|.+.. ...+++|.|+|+||..+-.+|.+-.+. ++++++.+++.
T Consensus 160 ~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~p~~----------v~~lvl~~p~~ 211 (402)
T PLN02894 160 AWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKHPEH----------VQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhCchh----------hcEEEEECCcc
Confidence 45566666766543 234899999999999888777654433 88999888754
No 35
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.81 E-value=5.8e-07 Score=89.13 Aligned_cols=125 Identities=18% Similarity=0.332 Sum_probs=79.8
Q ss_pred EeeEEecCCCCceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCC-ccCCceeEE
Q 012068 54 SGYVTVNENHGRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSW-SREANILFL 132 (471)
Q Consensus 54 sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW-~~~anllfi 132 (471)
.+|+.+.+ +..|+|+-. .++. .|-||+++||||.++.. .... .| .+..+|+-+
T Consensus 6 ~~~~~~~~--~~~l~y~~~---g~~~-~~~lvllHG~~~~~~~~-~~~~-------------------~~~~~~~~vi~~ 59 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS---GNPD-GKPVVFLHGGPGSGTDP-GCRR-------------------FFDPETYRIVLF 59 (306)
T ss_pred CCeEEcCC--CcEEEEEEC---cCCC-CCEEEEECCCCCCCCCH-HHHh-------------------ccCccCCEEEEE
Confidence 57888865 567887532 2233 34578899999986541 1110 11 145799999
Q ss_pred ecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeee
Q 012068 133 ESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIIN 212 (471)
Q Consensus 133 DqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~in 212 (471)
|+| |.|.|...... . ..+.++.++++..+++ .. .-.++++.|+||||..+..+|.+..+.
T Consensus 60 D~~-G~G~S~~~~~~-~-~~~~~~~~~dl~~l~~----~l---~~~~~~lvG~S~GG~ia~~~a~~~p~~---------- 119 (306)
T TIGR01249 60 DQR-GCGKSTPHACL-E-ENTTWDLVADIEKLRE----KL---GIKNWLVFGGSWGSTLALAYAQTHPEV---------- 119 (306)
T ss_pred CCC-CCCCCCCCCCc-c-cCCHHHHHHHHHHHHH----Hc---CCCCEEEEEECHHHHHHHHHHHHChHh----------
Confidence 975 89988643221 1 1234455666555443 32 234799999999999888888765543
Q ss_pred eeeeEeeccccC
Q 012068 213 LKGFIVGNAVTD 224 (471)
Q Consensus 213 LkGi~IGNg~id 224 (471)
++++++.+..+.
T Consensus 120 v~~lvl~~~~~~ 131 (306)
T TIGR01249 120 VTGLVLRGIFLL 131 (306)
T ss_pred hhhheeeccccC
Confidence 788888877654
No 36
>PRK10749 lysophospholipase L2; Provisional
Probab=98.79 E-value=3e-07 Score=92.30 Aligned_cols=126 Identities=13% Similarity=0.089 Sum_probs=80.7
Q ss_pred CceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCc
Q 012068 64 GRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYT 143 (471)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~ 143 (471)
+..++|+.+... ..+|+||.++|-.+.+.. |.-+.. .+ . .+-.+++-+|.| |.|.|..
T Consensus 40 g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~-y~~~~~-----------~l--~----~~g~~v~~~D~~-G~G~S~~ 97 (330)
T PRK10749 40 DIPIRFVRFRAP---HHDRVVVICPGRIESYVK-YAELAY-----------DL--F----HLGYDVLIIDHR-GQGRSGR 97 (330)
T ss_pred CCEEEEEEccCC---CCCcEEEEECCccchHHH-HHHHHH-----------HH--H----HCCCeEEEEcCC-CCCCCCC
Confidence 567888876532 356899999998665544 333321 01 1 134689999975 8888853
Q ss_pred cCCCCC--CCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeecc
Q 012068 144 NTSSNL--KDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNA 221 (471)
Q Consensus 144 ~~~~~~--~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg 221 (471)
...... ...+.+..++|+..+++...... ...++++.|+|+||..+-.+|.+-.+ .++|+++.+|
T Consensus 98 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~~~l~GhSmGG~ia~~~a~~~p~----------~v~~lvl~~p 164 (330)
T PRK10749 98 LLDDPHRGHVERFNDYVDDLAAFWQQEIQPG---PYRKRYALAHSMGGAILTLFLQRHPG----------VFDAIALCAP 164 (330)
T ss_pred CCCCCCcCccccHHHHHHHHHHHHHHHHhcC---CCCCeEEEEEcHHHHHHHHHHHhCCC----------CcceEEEECc
Confidence 211100 00145667788888777655443 34689999999999877766654221 2789999988
Q ss_pred ccC
Q 012068 222 VTD 224 (471)
Q Consensus 222 ~id 224 (471)
...
T Consensus 165 ~~~ 167 (330)
T PRK10749 165 MFG 167 (330)
T ss_pred hhc
Confidence 654
No 37
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.77 E-value=1.3e-07 Score=89.81 Aligned_cols=100 Identities=21% Similarity=0.263 Sum_probs=68.3
Q ss_pred CCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHHHHH
Q 012068 81 KPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQD 160 (471)
Q Consensus 81 ~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d 160 (471)
.|.||+++|.||++.. |-.+.+ .. +..+++-+|.| |.|.|.... . .+.++.+++
T Consensus 2 ~p~vvllHG~~~~~~~-w~~~~~----------------~l---~~~~vi~~D~~-G~G~S~~~~--~---~~~~~~~~~ 55 (242)
T PRK11126 2 LPWLVFLHGLLGSGQD-WQPVGE----------------AL---PDYPRLYIDLP-GHGGSAAIS--V---DGFADVSRL 55 (242)
T ss_pred CCEEEEECCCCCChHH-HHHHHH----------------Hc---CCCCEEEecCC-CCCCCCCcc--c---cCHHHHHHH
Confidence 5889999999998877 544432 11 24899999965 888875321 1 145566777
Q ss_pred HHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 161 ALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 161 ~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
+.++|.. +.-.+++++|+|+||..+-.+|.+.... .++++++.++.
T Consensus 56 l~~~l~~-------~~~~~~~lvG~S~Gg~va~~~a~~~~~~---------~v~~lvl~~~~ 101 (242)
T PRK11126 56 LSQTLQS-------YNILPYWLVGYSLGGRIAMYYACQGLAG---------GLCGLIVEGGN 101 (242)
T ss_pred HHHHHHH-------cCCCCeEEEEECHHHHHHHHHHHhCCcc---------cccEEEEeCCC
Confidence 6666543 2345899999999999888888754221 17788887654
No 38
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.72 E-value=4.4e-07 Score=85.09 Aligned_cols=105 Identities=23% Similarity=0.345 Sum_probs=68.1
Q ss_pred CCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHHHHH
Q 012068 81 KPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQD 160 (471)
Q Consensus 81 ~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d 160 (471)
.|.||.++|.+|.+.. |-.+.+ .+ + +..+++-+|.| |.|.|....... ..+.++.+++
T Consensus 1 ~~~vv~~hG~~~~~~~-~~~~~~-----------~L-----~--~~~~v~~~d~~-g~G~s~~~~~~~--~~~~~~~~~~ 58 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD-WQALIE-----------LL-----G--PHFRCLAIDLP-GHGSSQSPDEIE--RYDFEEAAQD 58 (251)
T ss_pred CCEEEEEcCCCCchhh-HHHHHH-----------Hh-----c--ccCeEEEEcCC-CCCCCCCCCccC--hhhHHHHHHH
Confidence 4889999999888876 443321 11 1 34799999975 888875432111 1234455555
Q ss_pred HHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeecccc
Q 012068 161 ALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVT 223 (471)
Q Consensus 161 ~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~i 223 (471)
+ +..+.+.. ..++++|.|+|+||..+..+|.+..+ .++++++.++..
T Consensus 59 ~---~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~~----------~v~~lil~~~~~ 105 (251)
T TIGR03695 59 I---LATLLDQL---GIEPFFLVGYSMGGRIALYYALQYPE----------RVQGLILESGSP 105 (251)
T ss_pred H---HHHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCch----------heeeeEEecCCC
Confidence 2 22333333 34689999999999999888876543 288998887753
No 39
>PLN02965 Probable pheophorbidase
Probab=98.71 E-value=6e-07 Score=86.46 Aligned_cols=101 Identities=17% Similarity=0.215 Sum_probs=68.2
Q ss_pred EEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHH
Q 012068 84 VLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALV 163 (471)
Q Consensus 84 ilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~ 163 (471)
||.++|.++.+.. |-...+ .|. .+...+|-+|.| |.|.|-...... .+.++.|+|+.+
T Consensus 6 vvllHG~~~~~~~-w~~~~~-----------~L~------~~~~~via~Dl~-G~G~S~~~~~~~---~~~~~~a~dl~~ 63 (255)
T PLN02965 6 FVFVHGASHGAWC-WYKLAT-----------LLD------AAGFKSTCVDLT-GAGISLTDSNTV---SSSDQYNRPLFA 63 (255)
T ss_pred EEEECCCCCCcCc-HHHHHH-----------HHh------hCCceEEEecCC-cCCCCCCCcccc---CCHHHHHHHHHH
Confidence 8889999876656 433321 111 334689999975 888885332222 256677788777
Q ss_pred HHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 164 FLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 164 fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
+|.. .+ ..++++|.|+|+||..+..+|.+..+. ++++++.|+.
T Consensus 64 ~l~~----l~--~~~~~~lvGhSmGG~ia~~~a~~~p~~----------v~~lvl~~~~ 106 (255)
T PLN02965 64 LLSD----LP--PDHKVILVGHSIGGGSVTEALCKFTDK----------ISMAIYVAAA 106 (255)
T ss_pred HHHh----cC--CCCCEEEEecCcchHHHHHHHHhCchh----------eeEEEEEccc
Confidence 6654 11 125899999999999998888765443 7899988874
No 40
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.70 E-value=4.4e-07 Score=91.55 Aligned_cols=62 Identities=18% Similarity=0.186 Sum_probs=51.8
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcC-CccccccCChHHHHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRG-AGHEVPLFQPRRALILFR 454 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~-AGHmvP~dqP~~a~~mi~ 454 (471)
.+++||..|+.|.++|....+...+.+. ++-.++.|.+ |||+++.++|++...+|.
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~-----------------------p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~ 333 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG-----------------------PRGSLRVLRSPYGHDAFLKETDRIDAILT 333 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC-----------------------CCCeEEEEeCCccHHHHhcCHHHHHHHHH
Confidence 4899999999999999888888777652 1224678874 999999999999999999
Q ss_pred HHHcCC
Q 012068 455 SFLAGK 460 (471)
Q Consensus 455 ~fl~~~ 460 (471)
+|+...
T Consensus 334 ~FL~~~ 339 (343)
T PRK08775 334 TALRST 339 (343)
T ss_pred HHHHhc
Confidence 999653
No 41
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.64 E-value=2.1e-06 Score=83.50 Aligned_cols=137 Identities=18% Similarity=0.163 Sum_probs=91.6
Q ss_pred ceeEEeeEEecCCCCceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCce
Q 012068 50 FSQFSGYVTVNENHGRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANI 129 (471)
Q Consensus 50 ~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anl 129 (471)
.....+|++++ + +++++.|. -+++.|+++.|+|=|=.+=.. =.-.+ .+. .....+
T Consensus 20 ~~~~hk~~~~~---g--I~~h~~e~--g~~~gP~illlHGfPe~wysw-r~q~~-----------~la------~~~~rv 74 (322)
T KOG4178|consen 20 SAISHKFVTYK---G--IRLHYVEG--GPGDGPIVLLLHGFPESWYSW-RHQIP-----------GLA------SRGYRV 74 (322)
T ss_pred hhcceeeEEEc---c--EEEEEEee--cCCCCCEEEEEccCCccchhh-hhhhh-----------hhh------hcceEE
Confidence 34567888875 3 88888776 678999999999998876542 11000 011 112678
Q ss_pred eEEecCCCccccCccCC-CCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCC
Q 012068 130 LFLESPAGVGFSYTNTS-SNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSR 208 (471)
Q Consensus 130 lfiDqPvGtGfSy~~~~-~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~ 208 (471)
|.+|. .|-|+|..... .. .+.+..+.|+..+|.. +...++++.||+||+.-+=.+|....+..+
T Consensus 75 iA~Dl-rGyG~Sd~P~~~~~---Yt~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~Perv~---- 139 (322)
T KOG4178|consen 75 IAPDL-RGYGFSDAPPHISE---YTIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYPERVD---- 139 (322)
T ss_pred EecCC-CCCCCCCCCCCcce---eeHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhChhhcc----
Confidence 99997 69999876655 33 3677788887776654 225589999999999999999988877632
Q ss_pred CeeeeeeeEeeccccCccc
Q 012068 209 PIINLKGFIVGNAVTDNYY 227 (471)
Q Consensus 209 ~~inLkGi~IGNg~idp~~ 227 (471)
..+++++... ||..+|..
T Consensus 140 ~lv~~nv~~~-~p~~~~~~ 157 (322)
T KOG4178|consen 140 GLVTLNVPFP-NPKLKPLD 157 (322)
T ss_pred eEEEecCCCC-Ccccchhh
Confidence 1334444444 55555543
No 42
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.60 E-value=1e-06 Score=105.09 Aligned_cols=108 Identities=16% Similarity=0.167 Sum_probs=73.6
Q ss_pred CCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCC-----CCCCC
Q 012068 77 SALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTS-----SNLKD 151 (471)
Q Consensus 77 ~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~-----~~~~~ 151 (471)
+.++.|.||+|||.+|++.. |-.+.+ .+ .+..+++.+|.| |-|.|..... ... .
T Consensus 1367 ~~~~~~~vVllHG~~~s~~~-w~~~~~-----------~L-------~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~-~ 1425 (1655)
T PLN02980 1367 QNAEGSVVLFLHGFLGTGED-WIPIMK-----------AI-------SGSARCISIDLP-GHGGSKIQNHAKETQTEP-T 1425 (1655)
T ss_pred CCCCCCeEEEECCCCCCHHH-HHHHHH-----------HH-------hCCCEEEEEcCC-CCCCCCCccccccccccc-c
Confidence 34457899999999999887 544432 11 234799999976 8887754321 011 1
Q ss_pred CCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 152 SGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 152 ~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
.+.+..++++.++++. +...+++|.|+|+||..+-.+|.+..+. ++++++.+|.
T Consensus 1426 ~si~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~~----------V~~lVlis~~ 1479 (1655)
T PLN02980 1426 LSVELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSDK----------IEGAVIISGS 1479 (1655)
T ss_pred CCHHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChHh----------hCEEEEECCC
Confidence 2456667777666553 2345899999999999998888765544 7888887764
No 43
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.52 E-value=1.7e-06 Score=86.94 Aligned_cols=151 Identities=14% Similarity=0.092 Sum_probs=86.7
Q ss_pred CceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhh---h----cCCeEEcCCCCccccC---CCCC-ccCCceeEE
Q 012068 64 GRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASE---E----IGPFRINRNGSSLYLN---KYSW-SREANILFL 132 (471)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~---e----~GP~~~~~~~~~~~~N---~~sW-~~~anllfi 132 (471)
+..|+++.++.+ .-+.+|+.++|==+-+.. -.+. | -+|+.|+.+.. ..++ -... .+-.+|+-+
T Consensus 7 g~~l~~~~~~~~---~~kg~v~i~HG~~eh~~~--~~~~~~~~~~~~~~~~~~~~~ry-~~y~~~~~~~l~~~G~~V~~~ 80 (332)
T TIGR01607 7 GLLLKTYSWIVK---NAIGIIVLIHGLKSHLRL--QFLKINAKIVNNDRAVLIDTDNY-YIYKDSWIENFNKNGYSVYGL 80 (332)
T ss_pred CCeEEEeeeecc---CCeEEEEEECCCchhhhh--hhhhcCcccCCCCeeEEEcCCcc-eEeeHHHHHHHHHCCCcEEEe
Confidence 566777776653 234799999975333321 1111 1 13444432211 0011 0122 345899999
Q ss_pred ecCCCccccCccCC-CCCCCCCcHHHHHHHHHHHHHHHHh--------C--------CCCC-CCceEEEecccCccchHH
Q 012068 133 ESPAGVGFSYTNTS-SNLKDSGDNRTAQDALVFLIRWMSR--------F--------PQYK-YREFYIAGESYAGHYVPQ 194 (471)
Q Consensus 133 DqPvGtGfSy~~~~-~~~~~~~~~~~a~d~~~fL~~F~~~--------f--------p~~~-~~~~yi~GESYgG~yvP~ 194 (471)
|. .|.|.|.+... .... .+-++.++|+.++++..-+. + .++. +.|++|.|+|.||..+..
T Consensus 81 D~-rGHG~S~~~~~~~g~~-~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 81 DL-QGHGESDGLQNLRGHI-NCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALR 158 (332)
T ss_pred cc-cccCCCccccccccch-hhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHH
Confidence 97 59999875432 1111 15567888888888765431 0 0232 569999999999998877
Q ss_pred HHHHHHHHhccCCCCeeeeeeeEeeccccC
Q 012068 195 LAKKIIDYNSAYSRPIINLKGFIVGNAVTD 224 (471)
Q Consensus 195 lA~~i~~~n~~~~~~~inLkGi~IGNg~id 224 (471)
++.++.+.... ..+..++|+++.+|.+.
T Consensus 159 ~~~~~~~~~~~--~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 159 LLELLGKSNEN--NDKLNIKGCISLSGMIS 186 (332)
T ss_pred HHHHhcccccc--ccccccceEEEeccceE
Confidence 77655332100 01235899998888764
No 44
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.47 E-value=1.3e-06 Score=94.89 Aligned_cols=118 Identities=23% Similarity=0.338 Sum_probs=76.9
Q ss_pred EEecCCCCceEEEEEEEecC-CC-CCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCC-CCCccCCceeEEe
Q 012068 57 VTVNENHGRALFYWLTEAAS-SA-LKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNK-YSWSREANILFLE 133 (471)
Q Consensus 57 l~v~~~~~~~lFy~~~es~~-~~-~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~-~sW~~~anllfiD 133 (471)
+.+....+..+..|++.-.+ ++ ++-|+|++++||| +++ +|. ....+. .=+.+-+.||+++
T Consensus 368 ~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~-~~~--------------~~~~~~q~~~~~G~~V~~~n 430 (620)
T COG1506 368 VTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQ-VGY--------------SFNPEIQVLASAGYAVLAPN 430 (620)
T ss_pred EEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccc-ccc--------------ccchhhHHHhcCCeEEEEeC
Confidence 33333346789999987653 33 3369999999999 555 341 011111 2235668999999
Q ss_pred cCCCcc-ccCc--cCCC-CCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHH
Q 012068 134 SPAGVG-FSYT--NTSS-NLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAK 197 (471)
Q Consensus 134 qPvGtG-fSy~--~~~~-~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~ 197 (471)
|.|++ |+.. .... ++ . ....+|+.+++. |+++.|.....++.|+|.||||...-.++.
T Consensus 431 -~RGS~GyG~~F~~~~~~~~---g-~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~ 492 (620)
T COG1506 431 -YRGSTGYGREFADAIRGDW---G-GVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAAT 492 (620)
T ss_pred -CCCCCccHHHHHHhhhhcc---C-CccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHh
Confidence 66654 3321 1111 11 2 135788889888 999999888789999999999987555554
No 45
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.46 E-value=1.2e-05 Score=82.39 Aligned_cols=65 Identities=23% Similarity=0.263 Sum_probs=52.3
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEc-CCccccccCChHHHHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVR-GAGHEVPLFQPRRALILFR 454 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~-~AGHmvP~dqP~~a~~mi~ 454 (471)
.+|+||..|+.|.++|....+.....+.=.+ ...+++.|. ++||+.+.++|++..+.|.
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~--------------------~~~~l~~i~~~~GH~~~le~p~~~~~~L~ 368 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALLAAG--------------------ADVSYAEIDSPYGHDAFLLDDPRYGRLVR 368 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHHhcC--------------------CCeEEEEeCCCCCchhHhcCHHHHHHHHH
Confidence 5899999999999999998887766653100 123567775 8999999999999999999
Q ss_pred HHHcCC
Q 012068 455 SFLAGK 460 (471)
Q Consensus 455 ~fl~~~ 460 (471)
+|+.+.
T Consensus 369 ~FL~~~ 374 (379)
T PRK00175 369 AFLERA 374 (379)
T ss_pred HHHHhh
Confidence 999764
No 46
>PRK07581 hypothetical protein; Validated
Probab=98.45 E-value=1.5e-05 Score=80.22 Aligned_cols=59 Identities=15% Similarity=0.147 Sum_probs=51.1
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcC-CccccccCChHHHHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRG-AGHEVPLFQPRRALILFR 454 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~-AGHmvP~dqP~~a~~mi~ 454 (471)
.++||+.+|+.|..+|....+.+.+.+. +..++.|.+ +||+++.+||+....+|+
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~l~~~ip------------------------~a~l~~i~~~~GH~~~~~~~~~~~~~~~ 330 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEAEAALIP------------------------NAELRPIESIWGHLAGFGQNPADIAFID 330 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------CCeEEEeCCCCCccccccCcHHHHHHHH
Confidence 5899999999999999998887766652 334788898 999999999999999999
Q ss_pred HHHc
Q 012068 455 SFLA 458 (471)
Q Consensus 455 ~fl~ 458 (471)
+|+.
T Consensus 331 ~~~~ 334 (339)
T PRK07581 331 AALK 334 (339)
T ss_pred HHHH
Confidence 9985
No 47
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.26 E-value=2.2e-05 Score=78.47 Aligned_cols=60 Identities=28% Similarity=0.436 Sum_probs=53.1
Q ss_pred ceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHHHHH
Q 012068 377 LKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILFRSF 456 (471)
Q Consensus 377 irVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~~f 456 (471)
.+|||..|+.|.++|....+...+++ .|..+..|.+|||.+..++|++....|..|
T Consensus 265 ~pvlii~G~~D~~~p~~~~~~~~~~~------------------------pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~F 320 (326)
T KOG1454|consen 265 CPVLIIWGDKDQIVPLELAEELKKKL------------------------PNAELVEIPGAGHLPHLERPEEVAALLRSF 320 (326)
T ss_pred CceEEEEcCcCCccCHHHHHHHHhhC------------------------CCceEEEeCCCCcccccCCHHHHHHHHHHH
Confidence 78999999999999999776666654 477899999999999999999999999999
Q ss_pred HcCC
Q 012068 457 LAGK 460 (471)
Q Consensus 457 l~~~ 460 (471)
+.+.
T Consensus 321 i~~~ 324 (326)
T KOG1454|consen 321 IARL 324 (326)
T ss_pred HHHh
Confidence 9753
No 48
>PLN02511 hydrolase
Probab=98.24 E-value=7.4e-06 Score=84.07 Aligned_cols=118 Identities=17% Similarity=0.173 Sum_probs=72.0
Q ss_pred EeeEEecCCCCceEEEEEEEe--cCCCCCCCeEEEECCCCChhhhhh-hhhhhcCCeEEcCCCCccccCCCCCccCCcee
Q 012068 54 SGYVTVNENHGRALFYWLTEA--ASSALKKPLVLWLNGGPGCSSVAY-GASEEIGPFRINRNGSSLYLNKYSWSREANIL 130 (471)
Q Consensus 54 sGyl~v~~~~~~~lFy~~~es--~~~~~~~PlilWlnGGPG~SS~~~-g~f~e~GP~~~~~~~~~~~~N~~sW~~~anll 130 (471)
--++...+ +..+.+..+.. ...+.+.|+||.|+|..|+|...| -.+.. .-..+..+++
T Consensus 73 re~l~~~D--G~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~-----------------~~~~~g~~vv 133 (388)
T PLN02511 73 RECLRTPD--GGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLL-----------------RARSKGWRVV 133 (388)
T ss_pred EEEEECCC--CCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHH-----------------HHHHCCCEEE
Confidence 34566543 44565544432 123567899999999999874211 11110 0013456899
Q ss_pred EEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHH
Q 012068 131 FLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKK 198 (471)
Q Consensus 131 fiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~ 198 (471)
-+|.| |.|-|.......+ ....++|+.++++..-.++| ..+++++|+|.||..+-.++.+
T Consensus 134 ~~d~r-G~G~s~~~~~~~~----~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~~ 193 (388)
T PLN02511 134 VFNSR-GCADSPVTTPQFY----SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLGE 193 (388)
T ss_pred EEecC-CCCCCCCCCcCEE----cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHHh
Confidence 99975 7777753322211 23456777777776666665 4589999999999886655543
No 49
>PRK05855 short chain dehydrogenase; Validated
Probab=98.21 E-value=5e-05 Score=81.78 Aligned_cols=101 Identities=14% Similarity=0.112 Sum_probs=67.3
Q ss_pred CceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCc
Q 012068 64 GRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYT 143 (471)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~ 143 (471)
+..+.|+-+ .+.+.|.||.++|.++.+.. |..+.+ . +.+..+++-+|.| |.|.|..
T Consensus 12 g~~l~~~~~----g~~~~~~ivllHG~~~~~~~-w~~~~~-----------~-------L~~~~~Vi~~D~~-G~G~S~~ 67 (582)
T PRK05855 12 GVRLAVYEW----GDPDRPTVVLVHGYPDNHEV-WDGVAP-----------L-------LADRFRVVAYDVR-GAGRSSA 67 (582)
T ss_pred CEEEEEEEc----CCCCCCeEEEEcCCCchHHH-HHHHHH-----------H-------hhcceEEEEecCC-CCCCCCC
Confidence 556776643 22357999999999888776 554432 1 1234789999975 8998864
Q ss_pred cCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHH
Q 012068 144 NTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLA 196 (471)
Q Consensus 144 ~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA 196 (471)
..... ..+.++.++|+.++++..- ..+|++|+|+|+||..+-.++
T Consensus 68 ~~~~~--~~~~~~~a~dl~~~i~~l~------~~~~~~lvGhS~Gg~~a~~~a 112 (582)
T PRK05855 68 PKRTA--AYTLARLADDFAAVIDAVS------PDRPVHLLAHDWGSIQGWEAV 112 (582)
T ss_pred CCccc--ccCHHHHHHHHHHHHHHhC------CCCcEEEEecChHHHHHHHHH
Confidence 33221 1267788889888877531 134799999999995544333
No 50
>PLN02872 triacylglycerol lipase
Probab=98.21 E-value=2e-05 Score=80.84 Aligned_cols=61 Identities=20% Similarity=0.260 Sum_probs=49.8
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCcccc---ccCChHHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEV---PLFQPRRALIL 452 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmv---P~dqP~~a~~m 452 (471)
.++|+++.|..|.+++....+++.+.|.=. ..+..+.++||+. ..+.|+..++.
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~-----------------------~~l~~l~~~gH~dfi~~~eape~V~~~ 381 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPSK-----------------------PELLYLENYGHIDFLLSTSAKEDVYNH 381 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCCc-----------------------cEEEEcCCCCCHHHHhCcchHHHHHHH
Confidence 489999999999999999999999887510 1246778999963 45889999999
Q ss_pred HHHHHcC
Q 012068 453 FRSFLAG 459 (471)
Q Consensus 453 i~~fl~~ 459 (471)
|.+|+.+
T Consensus 382 Il~fL~~ 388 (395)
T PLN02872 382 MIQFFRS 388 (395)
T ss_pred HHHHHHH
Confidence 9999864
No 51
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.11 E-value=8.9e-05 Score=73.24 Aligned_cols=136 Identities=18% Similarity=0.175 Sum_probs=91.1
Q ss_pred eEEeeEEecCCCCceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeE
Q 012068 52 QFSGYVTVNENHGRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILF 131 (471)
Q Consensus 52 ~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllf 131 (471)
.-.|+....+ +..++|+-++..+++. .+|+.++|.=.++.- |-.+.+ .+. ..-..++=
T Consensus 9 ~~~~~~~~~d--~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~r-y~~la~-----------~l~------~~G~~V~~ 66 (298)
T COG2267 9 RTEGYFTGAD--GTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGR-YEELAD-----------DLA------ARGFDVYA 66 (298)
T ss_pred cccceeecCC--CceEEEEeecCCCCCC--cEEEEecCchHHHHH-HHHHHH-----------HHH------hCCCEEEE
Confidence 3445555433 6789999888765444 899999999666665 444332 111 23467888
Q ss_pred EecCCCccccC-ccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCe
Q 012068 132 LESPAGVGFSY-TNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPI 210 (471)
Q Consensus 132 iDqPvGtGfSy-~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~ 210 (471)
+|+| |.|.|. .... .. .+-.+...|+..|++..-+..| ..|+||+|||.||-.+...+....
T Consensus 67 ~D~R-GhG~S~r~~rg--~~-~~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~~---------- 129 (298)
T COG2267 67 LDLR-GHGRSPRGQRG--HV-DSFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARYP---------- 129 (298)
T ss_pred ecCC-CCCCCCCCCcC--Cc-hhHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhCC----------
Confidence 9985 999986 3222 11 1334566666666665554433 569999999999998777776554
Q ss_pred eeeeeeEeeccccCcc
Q 012068 211 INLKGFIVGNAVTDNY 226 (471)
Q Consensus 211 inLkGi~IGNg~idp~ 226 (471)
-+++|+++-+|++...
T Consensus 130 ~~i~~~vLssP~~~l~ 145 (298)
T COG2267 130 PRIDGLVLSSPALGLG 145 (298)
T ss_pred ccccEEEEECccccCC
Confidence 3499999999998765
No 52
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.06 E-value=8.8e-06 Score=75.91 Aligned_cols=56 Identities=16% Similarity=0.223 Sum_probs=47.9
Q ss_pred cCceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHHH
Q 012068 375 AGLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILFR 454 (471)
Q Consensus 375 ~girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~ 454 (471)
-.+++|+.+|..|.++|....+...+.+ ++..++.+.++||....+.|+..-++|.
T Consensus 174 i~~p~l~i~~~~D~~~p~~~~~~~~~~~------------------------~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 174 IKVPTLIIWGEDDPLVPPESSEQLAKLI------------------------PNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp TTSEEEEEEETTCSSSHHHHHHHHHHHS------------------------TTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHhc------------------------CCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 3699999999999999999888866654 2456789999999999999999988775
No 53
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.03 E-value=2e-05 Score=78.92 Aligned_cols=131 Identities=19% Similarity=0.252 Sum_probs=80.4
Q ss_pred EEEEEEEe--cCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCcc
Q 012068 67 LFYWLTEA--ASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTN 144 (471)
Q Consensus 67 lFy~~~es--~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~ 144 (471)
-.||++++ +.+|++||+||+++|| |.+.+.=|+.+. .-.+=+...+...+|.+|=..-. | ..
T Consensus 106 ~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~-----~L~~i~~~l~~~SILvLDYsLt~--~-~~ 169 (374)
T PF10340_consen 106 QSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIE-----FLLNIYKLLPEVSILVLDYSLTS--S-DE 169 (374)
T ss_pred ceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHH-----HHHHHHHHcCCCeEEEEeccccc--c-cc
Confidence 35999995 3468889999999999 444444444331 00111111223389999953221 0 00
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccC
Q 012068 145 TSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTD 224 (471)
Q Consensus 145 ~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~id 224 (471)
.+..|+ ....++.+..+...+.. ...++.|.|+|-||+.+-.+..++.+.++. +--+++++.+||++
T Consensus 170 ~~~~yP-----tQL~qlv~~Y~~Lv~~~---G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~-----~~Pk~~iLISPWv~ 236 (374)
T PF10340_consen 170 HGHKYP-----TQLRQLVATYDYLVESE---GNKNIILMGDSAGGNLALSFLQYLKKPNKL-----PYPKSAILISPWVN 236 (374)
T ss_pred CCCcCc-----hHHHHHHHHHHHHHhcc---CCCeEEEEecCccHHHHHHHHHHHhhcCCC-----CCCceeEEECCCcC
Confidence 222333 12334444344434232 245899999999999999999998775431 23479999999999
Q ss_pred cc
Q 012068 225 NY 226 (471)
Q Consensus 225 p~ 226 (471)
+.
T Consensus 237 l~ 238 (374)
T PF10340_consen 237 LV 238 (374)
T ss_pred Cc
Confidence 96
No 54
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=97.94 E-value=0.00031 Score=68.53 Aligned_cols=79 Identities=16% Similarity=0.140 Sum_probs=54.6
Q ss_pred CCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhcc
Q 012068 126 EANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSA 205 (471)
Q Consensus 126 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 205 (471)
-.+++-+|.| |.|.|.... .+.++..+|+.++++.+-+..|.+ .+++++|+|.||..+-.+|. ..
T Consensus 57 G~~v~~~Dl~-G~G~S~~~~------~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~----~~-- 121 (274)
T TIGR03100 57 GFPVLRFDYR-GMGDSEGEN------LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAP----AD-- 121 (274)
T ss_pred CCEEEEeCCC-CCCCCCCCC------CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhh----hC--
Confidence 3789999986 888875321 134456778888777665555543 36999999999976555542 11
Q ss_pred CCCCeeeeeeeEeeccccC
Q 012068 206 YSRPIINLKGFIVGNAVTD 224 (471)
Q Consensus 206 ~~~~~inLkGi~IGNg~id 224 (471)
-.++|+++.||++.
T Consensus 122 -----~~v~~lil~~p~~~ 135 (274)
T TIGR03100 122 -----LRVAGLVLLNPWVR 135 (274)
T ss_pred -----CCccEEEEECCccC
Confidence 13999999998854
No 55
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=97.85 E-value=0.002 Score=65.21 Aligned_cols=63 Identities=22% Similarity=0.259 Sum_probs=49.9
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEc-CCccccccCChHHHHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVR-GAGHEVPLFQPRRALILFR 454 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~-~AGHmvP~dqP~~a~~mi~ 454 (471)
.+++|+..|+.|.++|....+...+.+. +.+ -..+++.+. +|||+++.++|+...+.|.
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~--~~~------------------~~v~~~~i~~~~GH~~~le~p~~~~~~l~ 347 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALP--AAG------------------LRVTYVEIESPYGHDAFLVETDQVEELIR 347 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHh--hcC------------------CceEEEEeCCCCCcchhhcCHHHHHHHHH
Confidence 5899999999999999998888777763 110 012344564 8999999999999999999
Q ss_pred HHHc
Q 012068 455 SFLA 458 (471)
Q Consensus 455 ~fl~ 458 (471)
+|+.
T Consensus 348 ~FL~ 351 (351)
T TIGR01392 348 GFLR 351 (351)
T ss_pred HHhC
Confidence 9974
No 56
>PRK10985 putative hydrolase; Provisional
Probab=97.71 E-value=0.0011 Score=66.24 Aligned_cols=134 Identities=18% Similarity=0.118 Sum_probs=68.7
Q ss_pred eEEecCCCCceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhh-hhhcCCeEEcCCCCccccCCCCCccCCceeEEec
Q 012068 56 YVTVNENHGRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGA-SEEIGPFRINRNGSSLYLNKYSWSREANILFLES 134 (471)
Q Consensus 56 yl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~-f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDq 134 (471)
.+...+ +..+.+++.+....+.++|+||.++|.+|++...|.. +.+ .+. .+-.+++-+|.
T Consensus 35 ~~~~~d--g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~-----------~l~------~~G~~v~~~d~ 95 (324)
T PRK10985 35 RLELPD--GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLE-----------AAQ------KRGWLGVVMHF 95 (324)
T ss_pred EEECCC--CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHH-----------HHH------HCCCEEEEEeC
Confidence 355544 4455444433323345789999999999975421111 111 111 11246777886
Q ss_pred CCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeee
Q 012068 135 PAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLK 214 (471)
Q Consensus 135 PvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLk 214 (471)
.|.|-|-......+ .. ...+|+..+++...+++| ..+++++|+|+||..+-..+.+..+ ...++
T Consensus 96 -rG~g~~~~~~~~~~---~~-~~~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~~~~~~--------~~~~~ 159 (324)
T PRK10985 96 -RGCSGEPNRLHRIY---HS-GETEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLLAKEGD--------DLPLD 159 (324)
T ss_pred -CCCCCCccCCcceE---CC-CchHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHHHhhCC--------CCCcc
Confidence 46654422211211 11 124555554433333444 4589999999999875554443211 12266
Q ss_pred eeEeeccccC
Q 012068 215 GFIVGNAVTD 224 (471)
Q Consensus 215 Gi~IGNg~id 224 (471)
++++.++-.+
T Consensus 160 ~~v~i~~p~~ 169 (324)
T PRK10985 160 AAVIVSAPLM 169 (324)
T ss_pred EEEEEcCCCC
Confidence 6655555444
No 57
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.65 E-value=0.00027 Score=73.21 Aligned_cols=130 Identities=18% Similarity=0.130 Sum_probs=77.9
Q ss_pred eEEecCCCCceEEEEEEEecCCCCCCCeEEEECCCCChh--hhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEe
Q 012068 56 YVTVNENHGRALFYWLTEAASSALKKPLVLWLNGGPGCS--SVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLE 133 (471)
Q Consensus 56 yl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~S--S~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiD 133 (471)
.|.+.-..+..|--|++..+ ..+..|+||. .||.++. .+ |..+.+ .+ -.+-.++|-+|
T Consensus 170 ~v~i~~~~g~~l~g~l~~P~-~~~~~P~Vli-~gG~~~~~~~~-~~~~~~-----------~L------a~~Gy~vl~~D 229 (414)
T PRK05077 170 ELEFPIPGGGPITGFLHLPK-GDGPFPTVLV-CGGLDSLQTDY-YRLFRD-----------YL------APRGIAMLTID 229 (414)
T ss_pred EEEEEcCCCcEEEEEEEECC-CCCCccEEEE-eCCcccchhhh-HHHHHH-----------HH------HhCCCEEEEEC
Confidence 34443222335655555433 2356788884 5777763 23 222221 01 12237899999
Q ss_pred cCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeee
Q 012068 134 SPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINL 213 (471)
Q Consensus 134 qPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inL 213 (471)
.| |.|.|..... .. ........+.+++...|.....++.|+|.|+||.+++.+|..-.+ .+
T Consensus 230 ~p-G~G~s~~~~~------~~--d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~----------ri 290 (414)
T PRK05077 230 MP-SVGFSSKWKL------TQ--DSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP----------RL 290 (414)
T ss_pred CC-CCCCCCCCCc------cc--cHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc----------Cc
Confidence 88 9998853211 11 122223445566667776666789999999999999988864322 28
Q ss_pred eeeEeeccccC
Q 012068 214 KGFIVGNAVTD 224 (471)
Q Consensus 214 kGi~IGNg~id 224 (471)
+++++.+|.++
T Consensus 291 ~a~V~~~~~~~ 301 (414)
T PRK05077 291 KAVACLGPVVH 301 (414)
T ss_pred eEEEEECCccc
Confidence 89988887754
No 58
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=97.61 E-value=0.00096 Score=68.40 Aligned_cols=65 Identities=15% Similarity=0.094 Sum_probs=53.2
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcC-CccccccCChHHHHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRG-AGHEVPLFQPRRALILFR 454 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~-AGHmvP~dqP~~a~~mi~ 454 (471)
..|||+..|+.|.++|....++..+.+.=.+ .+.+++.|.+ +||+.+.++|+...+.|.
T Consensus 323 ~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~--------------------~~a~l~~I~s~~GH~~~le~p~~~~~~I~ 382 (389)
T PRK06765 323 EANVLMIPCKQDLLQPPRYNYKMVDILQKQG--------------------KYAEVYEIESINGHMAGVFDIHLFEKKIY 382 (389)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhhhcC--------------------CCeEEEEECCCCCcchhhcCHHHHHHHHH
Confidence 5899999999999999988877766653110 1456788885 999999999999999999
Q ss_pred HHHcCC
Q 012068 455 SFLAGK 460 (471)
Q Consensus 455 ~fl~~~ 460 (471)
+|+..+
T Consensus 383 ~FL~~~ 388 (389)
T PRK06765 383 EFLNRK 388 (389)
T ss_pred HHHccc
Confidence 999764
No 59
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=97.59 E-value=0.00031 Score=65.63 Aligned_cols=91 Identities=15% Similarity=0.194 Sum_probs=59.3
Q ss_pred cCCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhc
Q 012068 125 REANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNS 204 (471)
Q Consensus 125 ~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~ 204 (471)
+-..|+.+|..-+.||+..-...... ..-....+|+.++++...++. .....++.|+|.||||+.+-.++.+-.+
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~-~~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~~~~--- 87 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRG-DWGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQHPD--- 87 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTT-GTTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHHTCC---
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhc-cccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhcccce---
Confidence 45789999987777766532221111 123457888888776655444 5556689999999999988777762211
Q ss_pred cCCCCeeeeeeeEeeccccCccc
Q 012068 205 AYSRPIINLKGFIVGNAVTDNYY 227 (471)
Q Consensus 205 ~~~~~~inLkGi~IGNg~idp~~ 227 (471)
.++.++.++|.+|+..
T Consensus 88 -------~f~a~v~~~g~~d~~~ 103 (213)
T PF00326_consen 88 -------RFKAAVAGAGVSDLFS 103 (213)
T ss_dssp -------GSSEEEEESE-SSTTC
T ss_pred -------eeeeeeccceecchhc
Confidence 2789999999988753
No 60
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.58 E-value=0.0003 Score=68.62 Aligned_cols=106 Identities=14% Similarity=0.146 Sum_probs=69.8
Q ss_pred CCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHHH
Q 012068 79 LKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTA 158 (471)
Q Consensus 79 ~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a 158 (471)
.+.|.||+++|..+.++. |..+.+ .+.. +..+++-+|.| |.|.|....... .+.++.+
T Consensus 16 ~~~p~vvliHG~~~~~~~-w~~~~~-----------~L~~------~g~~vi~~dl~-g~G~s~~~~~~~---~~~~~~~ 73 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWC-WYKIRC-----------LMEN------SGYKVTCIDLK-SAGIDQSDADSV---TTFDEYN 73 (273)
T ss_pred CCCCeEEEECCCCCCcCc-HHHHHH-----------HHHh------CCCEEEEeccc-CCCCCCCCcccC---CCHHHHH
Confidence 677999999998777776 443331 1111 23689999987 888764332221 2555666
Q ss_pred HHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 159 QDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 159 ~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
+++.++|+. .. ...+++|.|+||||..+..++.+..+. ++++++.++.
T Consensus 74 ~~l~~~i~~----l~--~~~~v~lvGhS~GG~v~~~~a~~~p~~----------v~~lv~~~~~ 121 (273)
T PLN02211 74 KPLIDFLSS----LP--ENEKVILVGHSAGGLSVTQAIHRFPKK----------ICLAVYVAAT 121 (273)
T ss_pred HHHHHHHHh----cC--CCCCEEEEEECchHHHHHHHHHhChhh----------eeEEEEeccc
Confidence 666555543 22 136899999999999888777654332 7888887664
No 61
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.52 E-value=0.0008 Score=65.23 Aligned_cols=124 Identities=11% Similarity=0.090 Sum_probs=78.6
Q ss_pred CceEEEEEEEecCCCCCCCeEEEECCCCCh---hh-hhhhhhhhcCCeEEcCCCCccccCCCCC-ccCCceeEEecCCCc
Q 012068 64 GRALFYWLTEAASSALKKPLVLWLNGGPGC---SS-VAYGASEEIGPFRINRNGSSLYLNKYSW-SREANILFLESPAGV 138 (471)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~---SS-~~~g~f~e~GP~~~~~~~~~~~~N~~sW-~~~anllfiDqPvGt 138 (471)
..++|.|+++.... ..+|+||.++|-.+- +. + +..+.+ .+ .+-.+++-+|.| |.
T Consensus 9 ~g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~-~~~la~------------------~La~~Gy~Vl~~Dl~-G~ 67 (266)
T TIGR03101 9 HGFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRM-VALQAR------------------AFAAGGFGVLQIDLY-GC 67 (266)
T ss_pred CCcEEEEEecCCCC-CCceEEEEECCCcccccchhHH-HHHHHH------------------HHHHCCCEEEEECCC-CC
Confidence 45688988876432 336999999985331 11 2 111111 12 234789999975 88
Q ss_pred cccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEe
Q 012068 139 GFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIV 218 (471)
Q Consensus 139 GfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~I 218 (471)
|.|...... .+.+..++|+..++ +|++... ..+++|+|+|.||..+..+|.+..+ .++++++
T Consensus 68 G~S~g~~~~----~~~~~~~~Dv~~ai-~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~----------~v~~lVL 129 (266)
T TIGR03101 68 GDSAGDFAA----ARWDVWKEDVAAAY-RWLIEQG---HPPVTLWGLRLGALLALDAANPLAA----------KCNRLVL 129 (266)
T ss_pred CCCCCcccc----CCHHHHHHHHHHHH-HHHHhcC---CCCEEEEEECHHHHHHHHHHHhCcc----------ccceEEE
Confidence 888543221 13445566666643 3444432 3589999999999998888765432 2789999
Q ss_pred eccccCcc
Q 012068 219 GNAVTDNY 226 (471)
Q Consensus 219 GNg~idp~ 226 (471)
.+|.++..
T Consensus 130 ~~P~~~g~ 137 (266)
T TIGR03101 130 WQPVVSGK 137 (266)
T ss_pred eccccchH
Confidence 99887755
No 62
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.49 E-value=0.00037 Score=65.21 Aligned_cols=115 Identities=15% Similarity=0.088 Sum_probs=61.6
Q ss_pred CCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCc-----cCCCCCCCC
Q 012068 78 ALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYT-----NTSSNLKDS 152 (471)
Q Consensus 78 ~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~-----~~~~~~~~~ 152 (471)
.+..|+||+|+|+++.++- +..-.+ +. .+. + ..-+.||..|.| |.|.+.. ......
T Consensus 10 ~~~~P~vv~lHG~~~~~~~-~~~~~~-----~~----~~a-~----~~g~~Vv~Pd~~-g~~~~~~~~~~~~~~~~~--- 70 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASA-YVIDWG-----WK----AAA-D----RYGFVLVAPEQT-SYNSSNNCWDWFFTHHRA--- 70 (212)
T ss_pred CCCCCEEEEeCCCCCCHHH-HhhhcC-----hH----HHH-H----hCCeEEEecCCc-CccccCCCCCCCCccccC---
Confidence 4578999999999987664 221000 00 000 0 123577788865 3332211 000000
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 153 GDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 153 ~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
.......++.+++....++++ ....+++|+|+|.||..+-.+|.+-.+. +.++++.+|.
T Consensus 71 ~~~~~~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~~p~~----------~~~~~~~~g~ 129 (212)
T TIGR01840 71 RGTGEVESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCTYPDV----------FAGGASNAGL 129 (212)
T ss_pred CCCccHHHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHhCchh----------heEEEeecCC
Confidence 011223444444444444442 3445899999999999877776543322 6777777765
No 63
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.43 E-value=0.017 Score=55.84 Aligned_cols=128 Identities=20% Similarity=0.147 Sum_probs=83.2
Q ss_pred CceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCc
Q 012068 64 GRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYT 143 (471)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~ 143 (471)
+..||.-.......++-+-+|+.++|.=+-||..|--+.. +++ ..-.-+.-+|+ .|.|.|.+
T Consensus 37 G~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~----~l~-------------~~g~~v~a~D~-~GhG~SdG 98 (313)
T KOG1455|consen 37 GAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAK----RLA-------------KSGFAVYAIDY-EGHGRSDG 98 (313)
T ss_pred CCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHH----HHH-------------hCCCeEEEeec-cCCCcCCC
Confidence 5678877766555556778999999875555421221211 011 11234677998 59999975
Q ss_pred cCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeecccc
Q 012068 144 NTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVT 223 (471)
Q Consensus 144 ~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~i 223 (471)
.. .+.. +-+.+++|...|+..+- ...++++.|.|++|||.||-.+-.++.+ +. --..|+++..|..
T Consensus 99 l~--~yi~-~~d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGGAV~Ll~~~k--~p--------~~w~G~ilvaPmc 164 (313)
T KOG1455|consen 99 LH--AYVP-SFDLVVDDVISFFDSIK-EREENKGLPRFLFGESMGGAVALLIALK--DP--------NFWDGAILVAPMC 164 (313)
T ss_pred Cc--ccCC-cHHHHHHHHHHHHHHHh-hccccCCCCeeeeecCcchHHHHHHHhh--CC--------cccccceeeeccc
Confidence 43 2332 67778899888777654 4567888899999999999876666554 11 1267777776653
No 64
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.28 E-value=0.0013 Score=62.46 Aligned_cols=109 Identities=21% Similarity=0.341 Sum_probs=77.7
Q ss_pred CCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHH
Q 012068 78 ALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRT 157 (471)
Q Consensus 78 ~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~ 157 (471)
...-|+++.++|| |.|.|.|..|.- .+..+ -..-++-+| -.|.|-|-.++..++ +-|..
T Consensus 71 ~t~gpil~l~HG~-G~S~LSfA~~a~-----------el~s~-----~~~r~~a~D-lRgHGeTk~~~e~dl---S~eT~ 129 (343)
T KOG2564|consen 71 ATEGPILLLLHGG-GSSALSFAIFAS-----------ELKSK-----IRCRCLALD-LRGHGETKVENEDDL---SLETM 129 (343)
T ss_pred CCCccEEEEeecC-cccchhHHHHHH-----------HHHhh-----cceeEEEee-ccccCccccCChhhc---CHHHH
Confidence 3466999999999 999987777741 11111 011237799 599999988877664 77889
Q ss_pred HHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeec
Q 012068 158 AQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGN 220 (471)
Q Consensus 158 a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGN 220 (471)
++|+...++.+|..-| . +++|.|||.||-.+.+.|..= ...+|.|+.+.+
T Consensus 130 ~KD~~~~i~~~fge~~---~-~iilVGHSmGGaIav~~a~~k---------~lpsl~Gl~viD 179 (343)
T KOG2564|consen 130 SKDFGAVIKELFGELP---P-QIILVGHSMGGAIAVHTAASK---------TLPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHHHHhccCC---C-ceEEEeccccchhhhhhhhhh---------hchhhhceEEEE
Confidence 9999999998885443 2 799999999999876655421 123477887765
No 65
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.26 E-value=0.0026 Score=62.10 Aligned_cols=51 Identities=24% Similarity=0.179 Sum_probs=35.4
Q ss_pred HHHHHHHh-CCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCc
Q 012068 164 FLIRWMSR-FPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDN 225 (471)
Q Consensus 164 fL~~F~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp 225 (471)
.|..+++. ++ ....+++|+|+|+||..+-.+|.+-.+. +++++..+|+.++
T Consensus 124 ~l~~~~~~~~~-~~~~~~~~~G~S~GG~~a~~~a~~~p~~----------~~~~~~~~~~~~~ 175 (275)
T TIGR02821 124 ELPALVAAQFP-LDGERQGITGHSMGGHGALVIALKNPDR----------FKSVSAFAPIVAP 175 (275)
T ss_pred HHHHHHHhhCC-CCCCceEEEEEChhHHHHHHHHHhCccc----------ceEEEEECCccCc
Confidence 33344433 33 4456899999999999877777654332 7899998988775
No 66
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.02 E-value=0.0043 Score=57.52 Aligned_cols=104 Identities=22% Similarity=0.262 Sum_probs=67.0
Q ss_pred CCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHHHHH
Q 012068 81 KPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQD 160 (471)
Q Consensus 81 ~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d 160 (471)
.|.+++++|+|+++.. +....+. +..... + .+++.+|+| |.|.|. .. .. .....+++
T Consensus 21 ~~~i~~~hg~~~~~~~-~~~~~~~-----------~~~~~~---~-~~~~~~d~~-g~g~s~-~~--~~---~~~~~~~~ 77 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-WRPVFKV-----------LPALAA---R-YRVIAPDLR-GHGRSD-PA--GY---SLSAYADD 77 (282)
T ss_pred CCeEEEeCCCCCchhh-hHHHHHH-----------hhcccc---c-eEEEEeccc-CCCCCC-cc--cc---cHHHHHHH
Confidence 6799999999999987 4431110 111111 1 899999999 999996 11 11 22223555
Q ss_pred HHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccC
Q 012068 161 ALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTD 224 (471)
Q Consensus 161 ~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~id 224 (471)
+..+++ .. ...++++.|+|+||..+-.+|.+..+. ++++++.++...
T Consensus 78 ~~~~~~----~~---~~~~~~l~G~S~Gg~~~~~~~~~~p~~----------~~~~v~~~~~~~ 124 (282)
T COG0596 78 LAALLD----AL---GLEKVVLVGHSMGGAVALALALRHPDR----------VRGLVLIGPAPP 124 (282)
T ss_pred HHHHHH----Hh---CCCceEEEEecccHHHHHHHHHhcchh----------hheeeEecCCCC
Confidence 444444 22 223499999999988877777766553 778888777655
No 67
>PLN02442 S-formylglutathione hydrolase
Probab=96.93 E-value=0.0072 Score=59.26 Aligned_cols=57 Identities=16% Similarity=0.091 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCcc
Q 012068 157 TAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNY 226 (471)
Q Consensus 157 ~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~ 226 (471)
..+++...+..++.. +...+++|+|+|+||+-+-.+|.+-.+. +++++..+|..++.
T Consensus 125 ~~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~p~~----------~~~~~~~~~~~~~~ 181 (283)
T PLN02442 125 VVKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKNPDK----------YKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhCchh----------EEEEEEECCccCcc
Confidence 345555555555543 3455799999999998777766653332 78999999987753
No 68
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.77 E-value=0.0014 Score=63.98 Aligned_cols=112 Identities=12% Similarity=0.134 Sum_probs=67.9
Q ss_pred CCCCeEEEECCCCChh-hhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHH
Q 012068 79 LKKPLVLWLNGGPGCS-SVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRT 157 (471)
Q Consensus 79 ~~~PlilWlnGGPG~S-S~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~ 157 (471)
.+.|++|+++|-.|.. ...+-.+. +.+.-....|+|.+|-+.+..-.|.. . ..+...+
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~----------------~~ll~~~~~nVi~vD~~~~~~~~y~~--a---~~~~~~v 92 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLR----------------KAYLSRGDYNVIVVDWGRGANPNYPQ--A---VNNTRVV 92 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHH----------------HHHHhcCCCEEEEEECccccccChHH--H---HHhHHHH
Confidence 4679999999987765 22100000 11111245899999987431111110 0 0134456
Q ss_pred HHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 158 AQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 158 a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
++++.++|+...+.. .....+++|+|+|.||+.+-.+|.++.+ .++.|+..+|.
T Consensus 93 ~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~----------~v~~iv~LDPa 146 (275)
T cd00707 93 GAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG----------KLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC----------ccceeEEecCC
Confidence 777777777665542 2334589999999999999888876543 27888887765
No 69
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.75 E-value=0.018 Score=56.37 Aligned_cols=61 Identities=18% Similarity=0.165 Sum_probs=47.3
Q ss_pred cCceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHHH
Q 012068 375 AGLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILFR 454 (471)
Q Consensus 375 ~girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~ 454 (471)
...+||+..|-.+--++..-..+.... +.+..+..+++|||+|..|+|+...+.|.
T Consensus 252 ~~~pvlfi~g~~S~fv~~~~~~~~~~~------------------------fp~~e~~~ld~aGHwVh~E~P~~~~~~i~ 307 (315)
T KOG2382|consen 252 YTGPVLFIKGLQSKFVPDEHYPRMEKI------------------------FPNVEVHELDEAGHWVHLEKPEEFIESIS 307 (315)
T ss_pred cccceeEEecCCCCCcChhHHHHHHHh------------------------ccchheeecccCCceeecCCHHHHHHHHH
Confidence 357999999999887777644443333 23455778888999999999999999999
Q ss_pred HHHcC
Q 012068 455 SFLAG 459 (471)
Q Consensus 455 ~fl~~ 459 (471)
+|+..
T Consensus 308 ~Fl~~ 312 (315)
T KOG2382|consen 308 EFLEE 312 (315)
T ss_pred HHhcc
Confidence 98854
No 70
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.58 E-value=0.028 Score=54.21 Aligned_cols=125 Identities=16% Similarity=0.219 Sum_probs=75.1
Q ss_pred CceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCc-----eeEEec----
Q 012068 64 GRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREAN-----ILFLES---- 134 (471)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~an-----llfiDq---- 134 (471)
+...-||+|.-..-++..||+|.|+|+=|..+- +- +-..|++.|. |+|-|+
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag-~~-------------------~~sg~d~lAd~~gFlV~yPdg~~~~ 103 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG-QL-------------------HGTGWDALADREGFLVAYPDGYDRA 103 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHH-hh-------------------cccchhhhhcccCcEEECcCccccc
Confidence 456779999876667788999999998776553 11 2223333322 334331
Q ss_pred --CCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeee
Q 012068 135 --PAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIIN 212 (471)
Q Consensus 135 --PvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~in 212 (471)
|-+.|=++...+.. ...+.+..+.+.+.....+|- .....+||+|=|-||..+-.++..-.+-
T Consensus 104 wn~~~~~~~~~p~~~~----~g~ddVgflr~lva~l~~~~g-idp~RVyvtGlS~GG~Ma~~lac~~p~~---------- 168 (312)
T COG3509 104 WNANGCGNWFGPADRR----RGVDDVGFLRALVAKLVNEYG-IDPARVYVTGLSNGGRMANRLACEYPDI---------- 168 (312)
T ss_pred cCCCcccccCCccccc----CCccHHHHHHHHHHHHHHhcC-cCcceEEEEeeCcHHHHHHHHHhcCccc----------
Confidence 44555554333211 111224444444444444442 3445899999999999888887654443
Q ss_pred eeeeEeecccc
Q 012068 213 LKGFIVGNAVT 223 (471)
Q Consensus 213 LkGi~IGNg~i 223 (471)
+.++++..|..
T Consensus 169 faa~A~VAg~~ 179 (312)
T COG3509 169 FAAIAPVAGLL 179 (312)
T ss_pred ccceeeeeccc
Confidence 88888888876
No 71
>PRK10566 esterase; Provisional
Probab=96.53 E-value=0.014 Score=55.59 Aligned_cols=61 Identities=25% Similarity=0.229 Sum_probs=46.9
Q ss_pred ceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHHHHH
Q 012068 377 LKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILFRSF 456 (471)
Q Consensus 377 irVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~~f 456 (471)
.+||+.+|..|.++|...++.+.+.++-.|.. .++++.++.++||... | ..++.+.+|
T Consensus 187 ~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~------------------~~~~~~~~~~~~H~~~---~-~~~~~~~~f 244 (249)
T PRK10566 187 RPLLLWHGLADDVVPAAESLRLQQALRERGLD------------------KNLTCLWEPGVRHRIT---P-EALDAGVAF 244 (249)
T ss_pred CCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCC------------------cceEEEecCCCCCccC---H-HHHHHHHHH
Confidence 69999999999999999999988887533322 2467889999999974 4 355666677
Q ss_pred HcC
Q 012068 457 LAG 459 (471)
Q Consensus 457 l~~ 459 (471)
+.+
T Consensus 245 l~~ 247 (249)
T PRK10566 245 FRQ 247 (249)
T ss_pred HHh
Confidence 753
No 72
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.51 E-value=0.021 Score=57.13 Aligned_cols=136 Identities=18% Similarity=0.224 Sum_probs=86.1
Q ss_pred CceEEEEEEEecCC-C-CCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCc-cCCceeEEecCCCccc
Q 012068 64 GRALFYWLTEAASS-A-LKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWS-REANILFLESPAGVGF 140 (471)
Q Consensus 64 ~~~lFy~~~es~~~-~-~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~-~~anllfiDqPvGtGf 140 (471)
.+.++-+.|..... + ..+|++||++||=-|-+.. -. ....+--++. ..+|.+-|= ++|
T Consensus 71 ~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~-~~--------------~~y~~~~~~~a~~~~~vvvS----VdY 131 (336)
T KOG1515|consen 71 FTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSA-NS--------------PAYDSFCTRLAAELNCVVVS----VDY 131 (336)
T ss_pred CCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCC-CC--------------chhHHHHHHHHHHcCeEEEe----cCc
Confidence 56799999987643 3 6899999999996554421 00 0111111222 455666554 366
Q ss_pred cCccCCCCCCCCCcHHHHHHHHHHHHH-HHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEee
Q 012068 141 SYTNTSSNLKDSGDNRTAQDALVFLIR-WMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVG 219 (471)
Q Consensus 141 Sy~~~~~~~~~~~~~~~a~d~~~fL~~-F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IG 219 (471)
-.+.+.. ++. .-++.-+.+..+++. |....-... +++|+|.|-||..+-.+|.++.+.. ...+.++|.++.
T Consensus 132 RLAPEh~-~Pa-~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~----~~~~ki~g~ili 203 (336)
T KOG1515|consen 132 RLAPEHP-FPA-AYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK----LSKPKIKGQILI 203 (336)
T ss_pred ccCCCCC-CCc-cchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc----CCCcceEEEEEE
Confidence 5544332 332 333344444444444 666554433 4999999999999999999998752 135779999999
Q ss_pred ccccCcc
Q 012068 220 NAVTDNY 226 (471)
Q Consensus 220 Ng~idp~ 226 (471)
-|++...
T Consensus 204 ~P~~~~~ 210 (336)
T KOG1515|consen 204 YPFFQGT 210 (336)
T ss_pred ecccCCC
Confidence 8887654
No 73
>PRK10115 protease 2; Provisional
Probab=96.35 E-value=0.0087 Score=65.97 Aligned_cols=140 Identities=16% Similarity=0.065 Sum_probs=81.6
Q ss_pred EecCCCCceEEEEEEEecC--CCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecC
Q 012068 58 TVNENHGRALFYWLTEAAS--SALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESP 135 (471)
Q Consensus 58 ~v~~~~~~~lFy~~~es~~--~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqP 135 (471)
.+....|..+-.|++.... .....|++|+.+||||.+... +...+ -.+|....=++.+=.+
T Consensus 420 ~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p-~f~~~----------------~~~l~~rG~~v~~~n~ 482 (686)
T PRK10115 420 WITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDA-DFSFS----------------RLSLLDRGFVYAIVHV 482 (686)
T ss_pred EEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC-CccHH----------------HHHHHHCCcEEEEEEc
Confidence 3333446667766654332 235569999999999999652 22111 1235554444444447
Q ss_pred CCccccCccC--CCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeee
Q 012068 136 AGVGFSYTNT--SSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINL 213 (471)
Q Consensus 136 vGtGfSy~~~--~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inL 213 (471)
.|.| .|+.. ..+... .-...-+|+.++.+... ...--...++.|.|-||||..+-.++.+-.+. +
T Consensus 483 RGs~-g~G~~w~~~g~~~-~k~~~~~D~~a~~~~Lv-~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdl----------f 549 (686)
T PRK10115 483 RGGG-ELGQQWYEDGKFL-KKKNTFNDYLDACDALL-KLGYGSPSLCYGMGGSAGGMLMGVAINQRPEL----------F 549 (686)
T ss_pred CCCC-ccCHHHHHhhhhh-cCCCcHHHHHHHHHHHH-HcCCCChHHeEEEEECHHHHHHHHHHhcChhh----------e
Confidence 7654 33321 000000 11134667776654433 33333445799999999999776666544333 9
Q ss_pred eeeEeeccccCccc
Q 012068 214 KGFIVGNAVTDNYY 227 (471)
Q Consensus 214 kGi~IGNg~idp~~ 227 (471)
++++.++|++|...
T Consensus 550 ~A~v~~vp~~D~~~ 563 (686)
T PRK10115 550 HGVIAQVPFVDVVT 563 (686)
T ss_pred eEEEecCCchhHhh
Confidence 99999999998863
No 74
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=96.32 E-value=0.014 Score=62.75 Aligned_cols=129 Identities=17% Similarity=0.119 Sum_probs=78.9
Q ss_pred CceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCC-ccCCceeEEecCCCccccC
Q 012068 64 GRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSW-SREANILFLESPAGVGFSY 142 (471)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW-~~~anllfiDqPvGtGfSy 142 (471)
+..|+...+..+. .+..|+||.++|--..+... ... + . ....-| .+-..+|-+|. .|.|.|.
T Consensus 6 G~~L~~~~~~P~~-~~~~P~Il~~~gyg~~~~~~-~~~-~------------~-~~~~~l~~~Gy~vv~~D~-RG~g~S~ 68 (550)
T TIGR00976 6 GTRLAIDVYRPAG-GGPVPVILSRTPYGKDAGLR-WGL-D------------K-TEPAWFVAQGYAVVIQDT-RGRGASE 68 (550)
T ss_pred CCEEEEEEEecCC-CCCCCEEEEecCCCCchhhc-ccc-c------------c-ccHHHHHhCCcEEEEEec-cccccCC
Confidence 5678877665432 34689999999654332210 000 0 0 000112 23578999995 7999997
Q ss_pred ccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 143 TNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 143 ~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
+.... + + .+.++|+.++|+ |+.+.|. .+.++.++|+||||..+-.+|..- .-.|++++..+++
T Consensus 69 g~~~~-~---~-~~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~~----------~~~l~aiv~~~~~ 131 (550)
T TIGR00976 69 GEFDL-L---G-SDEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQLLAAVLQ----------PPALRAIAPQEGV 131 (550)
T ss_pred CceEe-c---C-cccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHHHHHhccC----------CCceeEEeecCcc
Confidence 54321 1 2 345777777544 6666664 345899999999998665555421 1249999998888
Q ss_pred cCcc
Q 012068 223 TDNY 226 (471)
Q Consensus 223 idp~ 226 (471)
.|..
T Consensus 132 ~d~~ 135 (550)
T TIGR00976 132 WDLY 135 (550)
T ss_pred cchh
Confidence 7654
No 75
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=96.27 E-value=0.014 Score=60.47 Aligned_cols=81 Identities=11% Similarity=0.133 Sum_probs=52.2
Q ss_pred CCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhcc
Q 012068 126 EANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSA 205 (471)
Q Consensus 126 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 205 (471)
..|||-+|.| |-|-| .-.... .+...+|+++.++|+...+.. .+.-.+++|.|+|.||+.+-.+|.+...
T Consensus 73 d~nVI~VDw~-g~g~s--~y~~a~--~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p~---- 142 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQ--HYPTSA--AYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTKH---- 142 (442)
T ss_pred CCEEEEEECC-CcCCC--CCcccc--ccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCCc----
Confidence 4799999997 33322 111111 134567888888776554333 2445689999999999988877754322
Q ss_pred CCCCeeeeeeeEeeccc
Q 012068 206 YSRPIINLKGFIVGNAV 222 (471)
Q Consensus 206 ~~~~~inLkGi~IGNg~ 222 (471)
.+.+|++.+|.
T Consensus 143 ------rV~rItgLDPA 153 (442)
T TIGR03230 143 ------KVNRITGLDPA 153 (442)
T ss_pred ------ceeEEEEEcCC
Confidence 27788887774
No 76
>PLN00021 chlorophyllase
Probab=96.16 E-value=0.013 Score=58.18 Aligned_cols=116 Identities=16% Similarity=0.161 Sum_probs=69.3
Q ss_pred CCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHH
Q 012068 78 ALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRT 157 (471)
Q Consensus 78 ~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~ 157 (471)
..+.|+|++++|+.+.... |..+.+ .+. +| -..++.+|.+ |++... . . .+.+.
T Consensus 49 ~g~~PvVv~lHG~~~~~~~-y~~l~~-----------~La----s~--G~~VvapD~~---g~~~~~--~-~---~~i~d 101 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSF-YSQLLQ-----------HIA----SH--GFIVVAPQLY---TLAGPD--G-T---DEIKD 101 (313)
T ss_pred CCCCCEEEEECCCCCCccc-HHHHHH-----------HHH----hC--CCEEEEecCC---CcCCCC--c-h---hhHHH
Confidence 4578999999999777655 333332 111 11 2567777765 333211 1 0 22234
Q ss_pred HHHHHHHHHHHHHh-CC---CCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCc
Q 012068 158 AQDALVFLIRWMSR-FP---QYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDN 225 (471)
Q Consensus 158 a~d~~~fL~~F~~~-fp---~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp 225 (471)
+.++.+++.+-++. .| +....+++|+|+|.||..+-.+|.+..+.. ....+++++..+++...
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~-----~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS-----LPLKFSALIGLDPVDGT 168 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc-----cccceeeEEeecccccc
Confidence 56666666654432 11 233457999999999998888886554321 12458899988887543
No 77
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=96.01 E-value=0.34 Score=51.70 Aligned_cols=85 Identities=8% Similarity=-0.007 Sum_probs=51.1
Q ss_pred CceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccC
Q 012068 127 ANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAY 206 (471)
Q Consensus 127 anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~ 206 (471)
..++-||- .|-|.|....+ -++-+.+.+.++|..+.+.. ...+++++|+|.||..+...+..+.....
T Consensus 221 f~V~~iDw-rgpg~s~~~~~------~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~~-- 288 (532)
T TIGR01838 221 HTVFVISW-RNPDASQADKT------FDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARGD-- 288 (532)
T ss_pred cEEEEEEC-CCCCcccccCC------hhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhCC--
Confidence 56777885 46676632211 12223345666666665443 35689999999999987664333322210
Q ss_pred CCCeeeeeeeEeeccccCcc
Q 012068 207 SRPIINLKGFIVGNAVTDNY 226 (471)
Q Consensus 207 ~~~~inLkGi~IGNg~idp~ 226 (471)
.-.++++++.+..+|..
T Consensus 289 ---~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 289 ---DKRIKSATFFTTLLDFS 305 (532)
T ss_pred ---CCccceEEEEecCcCCC
Confidence 11378888888777754
No 78
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=95.91 E-value=0.011 Score=65.71 Aligned_cols=137 Identities=23% Similarity=0.185 Sum_probs=79.6
Q ss_pred CceEEEEEEEecC--CCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCcc-CCceeEEecCCCccc
Q 012068 64 GRALFYWLTEAAS--SALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSR-EANILFLESPAGVGF 140 (471)
Q Consensus 64 ~~~lFy~~~es~~--~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~-~anllfiDqPvGtGf 140 (471)
+-..++++....+ +.++-||+++..||||+-+.. +.| .+..|.+.+.+ -+-++.|| +.|+|+
T Consensus 507 ~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~-~~~-------------~~~~~~~~~s~~g~~v~~vd-~RGs~~ 571 (755)
T KOG2100|consen 507 GITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVT-SKF-------------SVDWNEVVVSSRGFAVLQVD-GRGSGG 571 (755)
T ss_pred cEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceee-eeE-------------EecHHHHhhccCCeEEEEEc-CCCcCC
Confidence 3456666665542 345789999999999933321 111 12334444433 36678899 899997
Q ss_pred cCccCCCC-CCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEee
Q 012068 141 SYTNTSSN-LKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVG 219 (471)
Q Consensus 141 Sy~~~~~~-~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IG 219 (471)
.=..-... ....++ ...+|....++.+.+.+ ..-..++.|+|.||||... .+++.+.+ .--+|--+..
T Consensus 572 ~G~~~~~~~~~~lG~-~ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy~t----~~~l~~~~-----~~~fkcgvav 640 (755)
T KOG2100|consen 572 YGWDFRSALPRNLGD-VEVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGYLT----LKLLESDP-----GDVFKCGVAV 640 (755)
T ss_pred cchhHHHHhhhhcCC-cchHHHHHHHHHHHhcc-cccHHHeEEeccChHHHHH----HHHhhhCc-----CceEEEEEEe
Confidence 53221110 101122 24677777777777665 3444579999999999853 33333321 1225665777
Q ss_pred ccccCcc
Q 012068 220 NAVTDNY 226 (471)
Q Consensus 220 Ng~idp~ 226 (471)
+|++|..
T Consensus 641 aPVtd~~ 647 (755)
T KOG2100|consen 641 APVTDWL 647 (755)
T ss_pred cceeeee
Confidence 7877764
No 79
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=95.86 E-value=0.045 Score=53.15 Aligned_cols=118 Identities=18% Similarity=0.257 Sum_probs=80.4
Q ss_pred CCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCC----CCCCCCcHH
Q 012068 81 KPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSS----NLKDSGDNR 156 (471)
Q Consensus 81 ~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~----~~~~~~~~~ 156 (471)
+++++|+-|-||.-.. |--|.+ .+..+- +....++=+... |+|...... .....+.++
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~-----------~L~~~l---~~~~~i~~ish~---Gh~~~~~~~~~~~~~~~~sL~~ 63 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLS-----------ALYEKL---NPQFEILGISHA---GHSTSPSNSKFSPNGRLFSLQD 63 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHH-----------HHHHhC---CCCCeeEEecCC---CCcCCcccccccCCCCccCHHH
Confidence 5799999999999998 776654 233331 566777777765 666654431 111247788
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccC
Q 012068 157 TAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTD 224 (471)
Q Consensus 157 ~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~id 224 (471)
..+.-.+||+++....+ ..+.+++|.|||-|+..+-.+.+++.+ ...+++++++.=|.+.
T Consensus 64 QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGayi~levl~r~~~-------~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 64 QIEHKIDFIKELIPQKN-KPNVKLILIGHSIGAYIALEVLKRLPD-------LKFRVKKVILLFPTIE 123 (266)
T ss_pred HHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHHHHHHHHHhccc-------cCCceeEEEEeCCccc
Confidence 89999999999987654 235689999999998766555555541 2355666666555543
No 80
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=95.84 E-value=0.41 Score=48.25 Aligned_cols=61 Identities=15% Similarity=0.140 Sum_probs=46.1
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCCh---HHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQP---RRALIL 452 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP---~~a~~m 452 (471)
..+|++.+|..|.++|...++.+.+.+.= . ..+++.+ .+||+.+.+.| +.+..-
T Consensus 286 ~~Pvliv~G~~D~i~~~~~~~~~~~~~~~--~--------------------~~~~~~~-~~gH~~~~~~~~~~~~v~~~ 342 (350)
T TIGR01836 286 KMPILNIYAERDHLVPPDASKALNDLVSS--E--------------------DYTELSF-PGGHIGIYVSGKAQKEVPPA 342 (350)
T ss_pred CCCeEEEecCCCCcCCHHHHHHHHHHcCC--C--------------------CeEEEEc-CCCCEEEEECchhHhhhhHH
Confidence 58999999999999999999988887641 1 1234443 58999999876 455677
Q ss_pred HHHHHcC
Q 012068 453 FRSFLAG 459 (471)
Q Consensus 453 i~~fl~~ 459 (471)
+.+|+..
T Consensus 343 i~~wl~~ 349 (350)
T TIGR01836 343 IGKWLQA 349 (350)
T ss_pred HHHHHHh
Confidence 7778753
No 81
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=95.77 E-value=0.23 Score=55.55 Aligned_cols=85 Identities=18% Similarity=0.302 Sum_probs=56.0
Q ss_pred ccCCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhC--------------CCCCCCceEEEecccCc
Q 012068 124 SREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRF--------------PQYKYREFYIAGESYAG 189 (471)
Q Consensus 124 ~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~f--------------p~~~~~~~yi~GESYgG 189 (471)
.+-.++|++| .+|+|-|-+.-.. ...+..+|..+ +.+|+... -.+.+-++-++|.||||
T Consensus 277 ~rGYaVV~~D-~RGtg~SeG~~~~-----~~~~E~~D~~~-vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 277 PRGFAVVYVS-GIGTRGSDGCPTT-----GDYQEIESMKA-VIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hCCeEEEEEc-CCCCCCCCCcCcc-----CCHHHHHHHHH-HHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 3468999999 5899999875432 12233445544 33466532 12334589999999999
Q ss_pred cchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCc
Q 012068 190 HYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDN 225 (471)
Q Consensus 190 ~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp 225 (471)
...-.+|..-. -.||.|+-..|+.+.
T Consensus 350 ~~~~~aAa~~p----------p~LkAIVp~a~is~~ 375 (767)
T PRK05371 350 TLPNAVATTGV----------EGLETIIPEAAISSW 375 (767)
T ss_pred HHHHHHHhhCC----------CcceEEEeeCCCCcH
Confidence 98776665322 239999988887664
No 82
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.64 E-value=0.038 Score=51.81 Aligned_cols=101 Identities=15% Similarity=0.185 Sum_probs=67.9
Q ss_pred eEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCcc-CCceeEEecCCCccccCccCCCCCCCCCcHHHHHHH
Q 012068 83 LVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSR-EANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDA 161 (471)
Q Consensus 83 lilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~-~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~ 161 (471)
.|+++.+|=|+++. |--+.. . ..+ ..++..|+.| |....... ..+.++.|+..
T Consensus 2 ~lf~~p~~gG~~~~-y~~la~------------~------l~~~~~~v~~i~~~---~~~~~~~~----~~si~~la~~y 55 (229)
T PF00975_consen 2 PLFCFPPAGGSASS-YRPLAR------------A------LPDDVIGVYGIEYP---GRGDDEPP----PDSIEELASRY 55 (229)
T ss_dssp EEEEESSTTCSGGG-GHHHHH------------H------HTTTEEEEEEECST---TSCTTSHE----ESSHHHHHHHH
T ss_pred eEEEEcCCccCHHH-HHHHHH------------h------CCCCeEEEEEEecC---CCCCCCCC----CCCHHHHHHHH
Confidence 57888888776655 433331 0 111 4678889977 44311111 13677888887
Q ss_pred HHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 162 LVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 162 ~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
.+.|+. ..|+ + |++|+|.|+||..+=.+|.++.++. ...+.|++.++.
T Consensus 56 ~~~I~~---~~~~--g-p~~L~G~S~Gg~lA~E~A~~Le~~G-------~~v~~l~liD~~ 103 (229)
T PF00975_consen 56 AEAIRA---RQPE--G-PYVLAGWSFGGILAFEMARQLEEAG-------EEVSRLILIDSP 103 (229)
T ss_dssp HHHHHH---HTSS--S-SEEEEEETHHHHHHHHHHHHHHHTT--------SESEEEEESCS
T ss_pred HHHhhh---hCCC--C-CeeehccCccHHHHHHHHHHHHHhh-------hccCceEEecCC
Confidence 776654 4442 2 9999999999999999999998873 448889998864
No 83
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.57 E-value=0.05 Score=44.65 Aligned_cols=64 Identities=30% Similarity=0.352 Sum_probs=53.2
Q ss_pred ceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHHHHH
Q 012068 377 LKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILFRSF 456 (471)
Q Consensus 377 irVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~~f 456 (471)
.+||+.+|..|.++|+.+++...+.|. +=..+++.++||-+....-.-+.+++++|
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~------------------------~s~lvt~~g~gHg~~~~~s~C~~~~v~~y 90 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLP------------------------GSRLVTVDGAGHGVYAGGSPCVDKAVDDY 90 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCC------------------------CceEEEEeccCcceecCCChHHHHHHHHH
Confidence 899999999999999999999999974 22479999999999864445667888888
Q ss_pred HcCCCCCC
Q 012068 457 LAGKQLPK 464 (471)
Q Consensus 457 l~~~~~~~ 464 (471)
+..-.+|.
T Consensus 91 l~~G~lP~ 98 (103)
T PF08386_consen 91 LLDGTLPA 98 (103)
T ss_pred HHcCCCCC
Confidence 88766664
No 84
>PRK10162 acetyl esterase; Provisional
Probab=95.42 E-value=0.043 Score=54.75 Aligned_cols=63 Identities=10% Similarity=0.041 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCc
Q 012068 158 AQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDN 225 (471)
Q Consensus 158 a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp 225 (471)
+.+.++++.+....+. ....++.|+|+|.||..+..+|.++.+... ....++|+++..|+++.
T Consensus 135 ~~~a~~~l~~~~~~~~-~d~~~i~l~G~SaGG~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 135 IVAVCCYFHQHAEDYG-INMSRIGFAGDSAGAMLALASALWLRDKQI----DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHHhHHHhC-CChhHEEEEEECHHHHHHHHHHHHHHhcCC----CccChhheEEECCccCC
Confidence 3444444444333321 234579999999999999999987765421 12447888888888764
No 85
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=95.39 E-value=0.0092 Score=60.74 Aligned_cols=83 Identities=20% Similarity=0.220 Sum_probs=55.5
Q ss_pred cCCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhc
Q 012068 125 REANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNS 204 (471)
Q Consensus 125 ~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~ 204 (471)
.-.+||=||-| |||+|.... + + +..+.++..+.+|+...|+....++.++|-|.||.|++.+|+.=.++
T Consensus 217 rGiA~LtvDmP-G~G~s~~~~---l---~--~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~R-- 285 (411)
T PF06500_consen 217 RGIAMLTVDMP-GQGESPKWP---L---T--QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPR-- 285 (411)
T ss_dssp CT-EEEEE--T-TSGGGTTT----S------S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT--
T ss_pred CCCEEEEEccC-CCcccccCC---C---C--cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccc--
Confidence 44689999987 999985322 1 1 12345667778888889999888999999999999999998532222
Q ss_pred cCCCCeeeeeeeEeeccccCcc
Q 012068 205 AYSRPIINLKGFIVGNAVTDNY 226 (471)
Q Consensus 205 ~~~~~~inLkGi~IGNg~idp~ 226 (471)
|||++.-.|.++..
T Consensus 286 --------lkavV~~Ga~vh~~ 299 (411)
T PF06500_consen 286 --------LKAVVALGAPVHHF 299 (411)
T ss_dssp ---------SEEEEES---SCG
T ss_pred --------eeeEeeeCchHhhh
Confidence 89987777766543
No 86
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=94.75 E-value=0.1 Score=49.01 Aligned_cols=47 Identities=19% Similarity=0.198 Sum_probs=35.0
Q ss_pred HHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeecccc
Q 012068 167 RWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVT 223 (471)
Q Consensus 167 ~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~i 223 (471)
+.+........+++|++|.|-||.....+|....+. +.++++.+|..
T Consensus 86 ~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~----------faa~a~~sG~~ 132 (220)
T PF10503_consen 86 DYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDL----------FAAVAVVSGVP 132 (220)
T ss_pred HhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCcc----------ceEEEeecccc
Confidence 333333345567899999999999988888766654 88888888863
No 87
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=94.28 E-value=3.1 Score=43.87 Aligned_cols=86 Identities=21% Similarity=0.239 Sum_probs=62.9
Q ss_pred hHHHHHHHHhcCceEEEEecCCCcccCchhHHHHHHhCCCC-CCCCcccceeCCeeeeEEEEecCeEEEEEcCCcccc--
Q 012068 365 VLPTYKQLIAAGLKIWVFSGDTDSVVPVTATRFSLSHLNLP-IKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEV-- 441 (471)
Q Consensus 365 ~~~~l~~LL~~girVLiy~Gd~D~i~~~~g~~~~i~~L~w~-~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmv-- 441 (471)
.-+.|....++|=|+|+|||..|.+++..++.++-+++.-. +.+ ..++..|+| |..|+|.||-.
T Consensus 342 ~~pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~-------~~~v~dF~R------lF~vPGm~HC~gG 408 (474)
T PF07519_consen 342 TDPDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGA-------LADVDDFYR------LFMVPGMGHCGGG 408 (474)
T ss_pred CCcCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccc-------cccccceeE------EEecCCCcccCCC
Confidence 44677888889999999999999999999999998887321 111 002333433 78999999986
Q ss_pred ccCChHHHHHHHHHHHcCCCCC
Q 012068 442 PLFQPRRALILFRSFLAGKQLP 463 (471)
Q Consensus 442 P~dqP~~a~~mi~~fl~~~~~~ 463 (471)
|-..|-.++.-|.+|+.+-.-|
T Consensus 409 ~g~~~~d~l~aL~~WVE~G~AP 430 (474)
T PF07519_consen 409 PGPDPFDALTALVDWVENGKAP 430 (474)
T ss_pred CCCCCCCHHHHHHHHHhCCCCC
Confidence 4345667888889999875544
No 88
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=94.04 E-value=0.074 Score=51.67 Aligned_cols=84 Identities=21% Similarity=0.207 Sum_probs=59.3
Q ss_pred CCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhcc
Q 012068 126 EANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSA 205 (471)
Q Consensus 126 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 205 (471)
-..+|.+| ..|+|-|.+.-.. ...+.++|.++ +.+|+.+.|--.+ ++-++|.||+|.....+|..-.
T Consensus 57 GY~vV~~D-~RG~g~S~G~~~~-----~~~~e~~D~~d-~I~W~~~Qpws~G-~VGm~G~SY~G~~q~~~A~~~~----- 123 (272)
T PF02129_consen 57 GYAVVVQD-VRGTGGSEGEFDP-----MSPNEAQDGYD-TIEWIAAQPWSNG-KVGMYGISYGGFTQWAAAARRP----- 123 (272)
T ss_dssp T-EEEEEE--TTSTTS-S-B-T-----TSHHHHHHHHH-HHHHHHHCTTEEE-EEEEEEETHHHHHHHHHHTTT------
T ss_pred CCEEEEEC-CcccccCCCcccc-----CChhHHHHHHH-HHHHHHhCCCCCC-eEEeeccCHHHHHHHHHHhcCC-----
Confidence 36789999 6999999876432 14566788888 6778888865444 8999999999998887776222
Q ss_pred CCCCeeeeeeeEeeccccCccc
Q 012068 206 YSRPIINLKGFIVGNAVTDNYY 227 (471)
Q Consensus 206 ~~~~~inLkGi~IGNg~idp~~ 227 (471)
-.||.|+...++.|...
T Consensus 124 -----p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 124 -----PHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp -----TTEEEEEEESE-SBTCC
T ss_pred -----CCceEEEecccCCcccc
Confidence 33999999988877653
No 89
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=93.98 E-value=0.07 Score=45.74 Aligned_cols=94 Identities=20% Similarity=0.312 Sum_probs=58.8
Q ss_pred eEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHH
Q 012068 83 LVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDAL 162 (471)
Q Consensus 83 lilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~ 162 (471)
+||+++|+.|.+.. |..+.+ .+. .+-.+++.+|.| |.|.+. ....+++++
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~~-----------~l~------~~G~~v~~~~~~-~~~~~~-----------~~~~~~~~~ 50 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLAE-----------ALA------EQGYAVVAFDYP-GHGDSD-----------GADAVERVL 50 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHHH-----------HHH------HTTEEEEEESCT-TSTTSH-----------HSHHHHHHH
T ss_pred CEEEECCCCCCHHH-HHHHHH-----------HHH------HCCCEEEEEecC-CCCccc-----------hhHHHHHHH
Confidence 68999999887665 444443 111 123678888875 555441 112344444
Q ss_pred HHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 163 VFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 163 ~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
+.+. +.++ ..++++|+|+|.||..+..++.+- . .+++++..+|+
T Consensus 51 ~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~----~-------~v~~~v~~~~~ 94 (145)
T PF12695_consen 51 ADIR---AGYP--DPDRIILIGHSMGGAIAANLAARN----P-------RVKAVVLLSPY 94 (145)
T ss_dssp HHHH---HHHC--TCCEEEEEEETHHHHHHHHHHHHS----T-------TESEEEEESES
T ss_pred HHHH---hhcC--CCCcEEEEEEccCcHHHHHHhhhc----c-------ceeEEEEecCc
Confidence 4332 3233 456999999999999887777632 1 28899998884
No 90
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=93.85 E-value=0.36 Score=46.88 Aligned_cols=119 Identities=15% Similarity=0.171 Sum_probs=62.6
Q ss_pred CCCeEEEECC-CCChhh-hhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCC--CCCCCcH
Q 012068 80 KKPLVLWLNG-GPGCSS-VAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSN--LKDSGDN 155 (471)
Q Consensus 80 ~~PlilWlnG-GPG~SS-~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~--~~~~~~~ 155 (471)
++|.+|=.+- |.=.-| .. ++|.- | .-....+++-++-||.| |-..--..-..+ |+ +.+
T Consensus 22 ~kp~ilT~HDvGlNh~scF~-~ff~~--~------------~m~~i~~~f~i~Hi~aP-Gqe~ga~~~p~~y~yP--smd 83 (283)
T PF03096_consen 22 NKPAILTYHDVGLNHKSCFQ-GFFNF--E------------DMQEILQNFCIYHIDAP-GQEEGAATLPEGYQYP--SMD 83 (283)
T ss_dssp TS-EEEEE--TT--HHHHCH-HHHCS--H------------HHHHHHTTSEEEEEE-T-TTSTT-----TT-------HH
T ss_pred CCceEEEeccccccchHHHH-HHhcc--h------------hHHHHhhceEEEEEeCC-CCCCCccccccccccc--CHH
Confidence 7888888885 333444 32 44421 1 11234677899999976 443322222223 43 778
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCcccccccchhh
Q 012068 156 RTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNYYDSIGTVTF 235 (471)
Q Consensus 156 ~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~~q~~~~~~~ 235 (471)
+.|+++-+.|..|= =+.+.-+|+--|......+|..-.+. +.|+++.|+.... .++.+.
T Consensus 84 ~LAe~l~~Vl~~f~-------lk~vIg~GvGAGAnIL~rfAl~~p~~----------V~GLiLvn~~~~~----~gw~Ew 142 (283)
T PF03096_consen 84 QLAEMLPEVLDHFG-------LKSVIGFGVGAGANILARFALKHPER----------VLGLILVNPTCTA----AGWMEW 142 (283)
T ss_dssp HHHCTHHHHHHHHT----------EEEEEETHHHHHHHHHHHHSGGG----------EEEEEEES---S-------HHHH
T ss_pred HHHHHHHHHHHhCC-------ccEEEEEeeccchhhhhhccccCccc----------eeEEEEEecCCCC----ccHHHH
Confidence 89999887665442 23588899988888777777644443 8899998876543 345555
Q ss_pred hh
Q 012068 236 WW 237 (471)
Q Consensus 236 a~ 237 (471)
++
T Consensus 143 ~~ 144 (283)
T PF03096_consen 143 FY 144 (283)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 91
>PRK11460 putative hydrolase; Provisional
Probab=93.74 E-value=0.34 Score=45.88 Aligned_cols=38 Identities=11% Similarity=0.040 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHH
Q 012068 160 DALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKK 198 (471)
Q Consensus 160 d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~ 198 (471)
.+.++++...++ .....++++|+|.|.||..+-.+|.+
T Consensus 86 ~l~~~i~~~~~~-~~~~~~~i~l~GfS~Gg~~al~~a~~ 123 (232)
T PRK11460 86 TFIETVRYWQQQ-SGVGASATALIGFSQGAIMALEAVKA 123 (232)
T ss_pred HHHHHHHHHHHh-cCCChhhEEEEEECHHHHHHHHHHHh
Confidence 344444433333 23445689999999999988776653
No 92
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=93.73 E-value=0.18 Score=52.48 Aligned_cols=95 Identities=16% Similarity=0.109 Sum_probs=60.8
Q ss_pred CCceeEEecCCCccccCccC-----CCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHH
Q 012068 126 EANILFLESPAGVGFSYTNT-----SSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKII 200 (471)
Q Consensus 126 ~anllfiDqPvGtGfSy~~~-----~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~ 200 (471)
.|-||+++. .==|-|.... .-.| -+.+|+..|+..|++.+-.++....+.|+.++|-||||..+.-+-.+..
T Consensus 59 ~a~~v~lEH-RyYG~S~P~~~~s~~nL~y--Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP 135 (434)
T PF05577_consen 59 GALVVALEH-RYYGKSQPFGDLSTENLRY--LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYP 135 (434)
T ss_dssp TEEEEEE---TTSTTB-TTGGGGGSTTTC---SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-T
T ss_pred CCcEEEeeh-hhhcCCCCccccchhhHHh--cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCC
Confidence 456777774 5555554321 1223 3789999999999999887776666779999999999998777776665
Q ss_pred HHhccCCCCeeeeeeeEeeccccCcccccccch
Q 012068 201 DYNSAYSRPIINLKGFIVGNAVTDNYYDSIGTV 233 (471)
Q Consensus 201 ~~n~~~~~~~inLkGi~IGNg~idp~~q~~~~~ 233 (471)
+- +.|.+--++.+....+...|.
T Consensus 136 ~~----------~~ga~ASSapv~a~~df~~y~ 158 (434)
T PF05577_consen 136 HL----------FDGAWASSAPVQAKVDFWEYF 158 (434)
T ss_dssp TT-----------SEEEEET--CCHCCTTTHHH
T ss_pred Ce----------eEEEEeccceeeeecccHHHH
Confidence 43 667777777777765544443
No 93
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=93.64 E-value=0.33 Score=49.41 Aligned_cols=109 Identities=20% Similarity=0.267 Sum_probs=71.0
Q ss_pred CCCCCeEEEECCCCChhhhh-----hhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCC
Q 012068 78 ALKKPLVLWLNGGPGCSSVA-----YGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDS 152 (471)
Q Consensus 78 ~~~~PlilWlnGGPG~SS~~-----~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~ 152 (471)
..++|+++.|.|=.|.|.-. -...++.| +++ +-. .+.|.|-|--++..-|..
T Consensus 122 ~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~--------------------VVf-N~RG~~g~~LtTpr~f~a- 178 (409)
T KOG1838|consen 122 DGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRV--------------------VVF-NHRGLGGSKLTTPRLFTA- 178 (409)
T ss_pred CCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEE--------------------EEE-CCCCCCCCccCCCceeec-
Confidence 46789999999999988621 13344555 332 111 279999888776654432
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 153 GDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 153 ~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
.. .+|+-++++---++|| .+++|.+|.|+||.. +.+++-+.-++ .-=..|++|-|||
T Consensus 179 g~---t~Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~i---L~nYLGE~g~~----~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 179 GW---TEDLREVVNHIKKRYP---QAPLFAVGFSMGGNI---LTNYLGEEGDN----TPLIAAVAVCNPW 235 (409)
T ss_pred CC---HHHHHHHHHHHHHhCC---CCceEEEEecchHHH---HHHHhhhccCC----CCceeEEEEeccc
Confidence 22 4556666655557888 459999999999985 44555544221 2236788888887
No 94
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=93.36 E-value=0.22 Score=46.00 Aligned_cols=122 Identities=21% Similarity=0.294 Sum_probs=80.9
Q ss_pred ceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCcc
Q 012068 65 RALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTN 144 (471)
Q Consensus 65 ~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~ 144 (471)
-.|.=|...+++ .+|++|+++|--|-- |.+.-+ . ...+. +=..||+-+|- .|-|-|.+.
T Consensus 65 vtL~a~~~~~E~---S~pTlLyfh~NAGNm----Ghr~~i------~---~~fy~----~l~mnv~ivsY-RGYG~S~Gs 123 (300)
T KOG4391|consen 65 VTLDAYLMLSES---SRPTLLYFHANAGNM----GHRLPI------A---RVFYV----NLKMNVLIVSY-RGYGKSEGS 123 (300)
T ss_pred eeEeeeeecccC---CCceEEEEccCCCcc----cchhhH------H---HHHHH----HcCceEEEEEe-eccccCCCC
Confidence 345555555443 789999999776643 333311 0 01111 34578999995 899999876
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccC
Q 012068 145 TSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTD 224 (471)
Q Consensus 145 ~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~id 224 (471)
..+.=.. .|.++ ..+++-..|....+++.++|.|-||--+-.+|.+-.+. +.++++-|-+++
T Consensus 124 psE~GL~-lDs~a-------vldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~r----------i~~~ivENTF~S 185 (300)
T KOG4391|consen 124 PSEEGLK-LDSEA-------VLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDR----------ISAIIVENTFLS 185 (300)
T ss_pred cccccee-ccHHH-------HHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhh----------eeeeeeechhcc
Confidence 5432111 23333 33345578888889999999999999998888876654 889999998765
Q ss_pred c
Q 012068 225 N 225 (471)
Q Consensus 225 p 225 (471)
-
T Consensus 186 I 186 (300)
T KOG4391|consen 186 I 186 (300)
T ss_pred c
Confidence 3
No 95
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.21 E-value=3.4 Score=39.12 Aligned_cols=59 Identities=24% Similarity=0.199 Sum_probs=46.9
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILFRS 455 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~~ 455 (471)
..+|.++.|+.|.+|...-...|-+..+ +.++ ..+...|||.+.+|.+.....|.+
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t~-----------------------~~f~-l~~fdGgHFfl~~~~~~v~~~i~~ 231 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHTK-----------------------GDFT-LRVFDGGHFFLNQQREEVLARLEQ 231 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhhc-----------------------CCce-EEEecCcceehhhhHHHHHHHHHH
Confidence 4899999999999999997777766532 1233 355579999999999999988888
Q ss_pred HHc
Q 012068 456 FLA 458 (471)
Q Consensus 456 fl~ 458 (471)
.+.
T Consensus 232 ~l~ 234 (244)
T COG3208 232 HLA 234 (244)
T ss_pred Hhh
Confidence 874
No 96
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=93.15 E-value=5.2 Score=38.92 Aligned_cols=93 Identities=10% Similarity=0.061 Sum_probs=58.6
Q ss_pred CCccCCceeEEecCCCccccCccCCCC--CCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHH
Q 012068 122 SWSREANILFLESPAGVGFSYTNTSSN--LKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKI 199 (471)
Q Consensus 122 sW~~~anllfiDqPvGtGfSy~~~~~~--~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i 199 (471)
+..+++-+.-||.| |--.--..-..+ |+ +.++.|+++...|+.|= + +-+.=+|+--|......+|..-
T Consensus 74 ei~~~fcv~HV~~P-Gqe~gAp~~p~~y~yP--smd~LAd~l~~VL~~f~-----l--k~vIg~GvGAGAyIL~rFAl~h 143 (326)
T KOG2931|consen 74 EILEHFCVYHVDAP-GQEDGAPSFPEGYPYP--SMDDLADMLPEVLDHFG-----L--KSVIGMGVGAGAYILARFALNH 143 (326)
T ss_pred HHHhheEEEecCCC-ccccCCccCCCCCCCC--CHHHHHHHHHHHHHhcC-----c--ceEEEecccccHHHHHHHHhcC
Confidence 34566888999987 221110011122 33 67889999888776542 2 2466689988877777888766
Q ss_pred HHHhccCCCCeeeeeeeEeeccccCcccccccchhhhhc
Q 012068 200 IDYNSAYSRPIINLKGFIVGNAVTDNYYDSIGTVTFWWT 238 (471)
Q Consensus 200 ~~~n~~~~~~~inLkGi~IGNg~idp~~q~~~~~~~a~~ 238 (471)
.+. +-|++++|..-.. .++++++|+
T Consensus 144 p~r----------V~GLvLIn~~~~a----~gwiew~~~ 168 (326)
T KOG2931|consen 144 PER----------VLGLVLINCDPCA----KGWIEWAYN 168 (326)
T ss_pred hhh----------eeEEEEEecCCCC----chHHHHHHH
Confidence 665 8899998865332 456666543
No 97
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=92.83 E-value=0.12 Score=48.36 Aligned_cols=58 Identities=12% Similarity=0.036 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCcc
Q 012068 157 TAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNY 226 (471)
Q Consensus 157 ~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~ 226 (471)
.++.+.++|....+.. ...++++|.|-|=||..+-.++.+..+ .+.|++..+|++-+.
T Consensus 86 s~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~p~----------~~~gvv~lsG~~~~~ 143 (216)
T PF02230_consen 86 SAERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRYPE----------PLAGVVALSGYLPPE 143 (216)
T ss_dssp HHHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCTSS----------TSSEEEEES---TTG
T ss_pred HHHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHcCc----------CcCEEEEeecccccc
Confidence 4444555555444332 456689999999999988777754322 389999999987554
No 98
>COG4099 Predicted peptidase [General function prediction only]
Probab=92.60 E-value=0.93 Score=43.99 Aligned_cols=55 Identities=16% Similarity=0.208 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccC
Q 012068 160 DALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTD 224 (471)
Q Consensus 160 d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~id 224 (471)
...+.+.+-+...+.....++|+.|-|-||.-.=+++.+..+- +.+.+..+|-=|
T Consensus 251 ~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdf----------FAaa~~iaG~~d 305 (387)
T COG4099 251 EKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDF----------FAAAVPIAGGGD 305 (387)
T ss_pred HHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchh----------hheeeeecCCCc
Confidence 3444455445566666777999999999999888888777765 667666666544
No 99
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=92.11 E-value=0.41 Score=50.69 Aligned_cols=59 Identities=19% Similarity=0.040 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccC
Q 012068 157 TAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTD 224 (471)
Q Consensus 157 ~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~id 224 (471)
.....++++++-...|.- ..+++.|+|||+||+.+-.++..-... --++++++.+|...
T Consensus 156 D~~~al~wv~~~i~~fgg-d~~~v~~~G~SaG~~~~~~~~~~~~~~--------~lf~~~i~~sg~~~ 214 (493)
T cd00312 156 DQRLALKWVQDNIAAFGG-DPDSVTIFGESAGGASVSLLLLSPDSK--------GLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHHhCC-CcceEEEEeecHHHHHhhhHhhCcchh--------HHHHHHhhhcCCcc
Confidence 345556777777766642 445899999999998665554321111 11566666666544
No 100
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.09 E-value=0.56 Score=44.33 Aligned_cols=119 Identities=20% Similarity=0.331 Sum_probs=63.0
Q ss_pred ceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCcc
Q 012068 65 RALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTN 144 (471)
Q Consensus 65 ~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~ 144 (471)
.+.|=|-.-.+...+++|+++|+-|-||-++. |--|.-. +..+-.. ++ .-|+-....+ .+.|.-+==+.+.
T Consensus 13 ~si~~~~~~v~~~~~~~~li~~IpGNPG~~gF-Y~~F~~~--L~~~l~~-r~--~~wtIsh~~H---~~~P~sl~~~~s~ 83 (301)
T KOG3975|consen 13 TSILTLKPWVTKSGEDKPLIVWIPGNPGLLGF-YTEFARH--LHLNLID-RL--PVWTISHAGH---ALMPASLREDHSH 83 (301)
T ss_pred ccceeeeeeeccCCCCceEEEEecCCCCchhH-HHHHHHH--HHHhccc-cc--ceeEEecccc---ccCCccccccccc
Confidence 34454443333334789999999999999977 5544320 0000000 00 0122222222 2344111111111
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHh
Q 012068 145 TSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYN 203 (471)
Q Consensus 145 ~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n 203 (471)
...+. .+.++..+.=.+|++++.- +++++||.|||=|... ..+|+..+
T Consensus 84 ~~~ei--fsL~~QV~HKlaFik~~~P-----k~~ki~iiGHSiGaYm----~Lqil~~~ 131 (301)
T KOG3975|consen 84 TNEEI--FSLQDQVDHKLAFIKEYVP-----KDRKIYIIGHSIGAYM----VLQILPSI 131 (301)
T ss_pred ccccc--cchhhHHHHHHHHHHHhCC-----CCCEEEEEecchhHHH----HHHHhhhc
Confidence 11111 3566677888899988773 4779999999988654 44555543
No 101
>PRK11071 esterase YqiA; Provisional
Probab=90.72 E-value=0.32 Score=44.63 Aligned_cols=54 Identities=17% Similarity=0.188 Sum_probs=44.2
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILFRS 455 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~~ 455 (471)
..+|+|.+|..|-++|+..+.+..++. ..+.+.||+|.. ...+..++.+.+
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~~---------------------------~~~~~~ggdH~f--~~~~~~~~~i~~ 186 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAAC---------------------------RQTVEEGGNHAF--VGFERYFNQIVD 186 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHhc---------------------------ceEEECCCCcch--hhHHHhHHHHHH
Confidence 368999999999999999998887742 145779999998 444888899999
Q ss_pred HHc
Q 012068 456 FLA 458 (471)
Q Consensus 456 fl~ 458 (471)
|+.
T Consensus 187 fl~ 189 (190)
T PRK11071 187 FLG 189 (190)
T ss_pred Hhc
Confidence 874
No 102
>PRK10566 esterase; Provisional
Probab=90.66 E-value=0.35 Score=45.84 Aligned_cols=110 Identities=12% Similarity=0.105 Sum_probs=63.0
Q ss_pred EEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCcc-CCceeEEecCCCccccCccCC
Q 012068 68 FYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSR-EANILFLESPAGVGFSYTNTS 146 (471)
Q Consensus 68 Fy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~-~anllfiDqPvGtGfSy~~~~ 146 (471)
+|-++++.......|+||.++|++|.... +..+.. .+.+ -.+++.+|.| |.|-|+....
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~~~~~~-~~~~~~------------------~l~~~G~~v~~~d~~-g~G~~~~~~~ 73 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFTSSKLV-YSYFAV------------------ALAQAGFRVIMPDAP-MHGARFSGDE 73 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCCcccch-HHHHHH------------------HHHhCCCEEEEecCC-cccccCCCcc
Confidence 44444443223457999999999887665 333221 1222 3688999965 7775543221
Q ss_pred CC-CCC-C-CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHH
Q 012068 147 SN-LKD-S-GDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKK 198 (471)
Q Consensus 147 ~~-~~~-~-~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~ 198 (471)
.. ... . ......+++.+++ .++...+.....+++|+|+|+||..+..++.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 74 ARRLNHFWQILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGIMAR 127 (249)
T ss_pred ccchhhHHHHHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHHHHh
Confidence 10 000 0 0012345555443 44444444456689999999999998877653
No 103
>PRK11460 putative hydrolase; Provisional
Probab=90.00 E-value=0.52 Score=44.66 Aligned_cols=62 Identities=21% Similarity=0.158 Sum_probs=46.8
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILFRS 455 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~~ 455 (471)
..+|++.+|..|.++|...++...+.|+-.+ .+.++..+.++||.+..+.-+.+.+-|++
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g--------------------~~~~~~~~~~~gH~i~~~~~~~~~~~l~~ 207 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLG--------------------GDVTLDIVEDLGHAIDPRLMQFALDRLRY 207 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCC--------------------CCeEEEEECCCCCCCCHHHHHHHHHHHHH
Confidence 5899999999999999999998888775222 13567888999999975555555555555
Q ss_pred HH
Q 012068 456 FL 457 (471)
Q Consensus 456 fl 457 (471)
++
T Consensus 208 ~l 209 (232)
T PRK11460 208 TV 209 (232)
T ss_pred Hc
Confidence 54
No 104
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=89.84 E-value=0.51 Score=47.70 Aligned_cols=68 Identities=21% Similarity=0.259 Sum_probs=45.5
Q ss_pred CCceeEEe-------cCCCccccCccCC-CCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHH
Q 012068 126 EANILFLE-------SPAGVGFSYTNTS-SNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAK 197 (471)
Q Consensus 126 ~anllfiD-------qPvGtGfSy~~~~-~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~ 197 (471)
.|-|||++ +|.|.- ||.+.. -+|. +.+|+-.|+.+.|+ ++++.+-=+..|+..+|-||||+...-+-.
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyL--tseQALADfA~ll~-~lK~~~~a~~~pvIafGGSYGGMLaAWfRl 186 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGYL--TSEQALADFAELLT-FLKRDLSAEASPVIAFGGSYGGMLAAWFRL 186 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhccc--cHHHHHHHHHHHHH-HHhhccccccCcEEEecCchhhHHHHHHHh
Confidence 46778887 577776 554332 2342 78899899888555 455543334569999999999976555543
No 105
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=89.35 E-value=1.5 Score=45.34 Aligned_cols=36 Identities=11% Similarity=0.088 Sum_probs=28.3
Q ss_pred CceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeecccc
Q 012068 178 REFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVT 223 (471)
Q Consensus 178 ~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~i 223 (471)
....|+|.|+||.-+-.+|.+-.+. +.+++..+|.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~----------Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPER----------FGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCccc----------ccEEEEeccce
Confidence 3589999999999888887765554 78888888754
No 106
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=89.11 E-value=1 Score=43.79 Aligned_cols=59 Identities=12% Similarity=-0.022 Sum_probs=48.3
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILFRS 455 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~~ 455 (471)
.+|+++..|..|.++|..-.+++.+.+. +. ..+.+ .+||+.+..+|+...++|.+
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~--~~----------------------~~~~l-~~gH~p~ls~P~~~~~~i~~ 265 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP--PS----------------------QVYEL-ESDHSPFFSTPFLLFGLLIK 265 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC--cc----------------------EEEEE-CCCCCccccCHHHHHHHHHH
Confidence 4899999999999999987777777653 11 25666 49999999999999999998
Q ss_pred HHcC
Q 012068 456 FLAG 459 (471)
Q Consensus 456 fl~~ 459 (471)
+...
T Consensus 266 ~a~~ 269 (273)
T PLN02211 266 AAAS 269 (273)
T ss_pred HHHH
Confidence 8654
No 107
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=89.08 E-value=2.3 Score=50.62 Aligned_cols=103 Identities=12% Similarity=0.131 Sum_probs=68.4
Q ss_pred CCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHHHHH
Q 012068 81 KPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQD 160 (471)
Q Consensus 81 ~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d 160 (471)
.|-++.++|+.|.+.. |..+.+. ......++-+|.| |.|-+ . ... .+.++.|++
T Consensus 1068 ~~~l~~lh~~~g~~~~-~~~l~~~------------------l~~~~~v~~~~~~-g~~~~--~-~~~---~~l~~la~~ 1121 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQ-FSVLSRY------------------LDPQWSIYGIQSP-RPDGP--M-QTA---TSLDEVCEA 1121 (1296)
T ss_pred CCCeEEecCCCCchHH-HHHHHHh------------------cCCCCcEEEEECC-CCCCC--C-CCC---CCHHHHHHH
Confidence 4668999999888777 5544421 1234677888987 44422 1 111 367778888
Q ss_pred HHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 161 ALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 161 ~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
..+.++.. .| ..|++|.|+|+||..+-.+|.++.++. ..+..+++.+++
T Consensus 1122 ~~~~i~~~---~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~-------~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1122 HLATLLEQ---QP---HGPYHLLGYSLGGTLAQGIAARLRARG-------EEVAFLGLLDTW 1170 (1296)
T ss_pred HHHHHHhh---CC---CCCEEEEEechhhHHHHHHHHHHHHcC-------CceeEEEEecCC
Confidence 87777642 22 348999999999999999998886642 236666666653
No 108
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=88.38 E-value=1.4 Score=40.41 Aligned_cols=61 Identities=25% Similarity=0.327 Sum_probs=45.1
Q ss_pred hcCceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHH
Q 012068 374 AAGLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILF 453 (471)
Q Consensus 374 ~~girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi 453 (471)
....++++..|+.|.+.+....+.+...+.. ...++++.++||+.+.++|+...+.+
T Consensus 219 ~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~gH~~~~~~p~~~~~~i 275 (282)
T COG0596 219 RITVPTLIIHGEDDPVVPAELARRLAAALPN-----------------------DARLVVIPGAGHFPHLEAPEAFAAAL 275 (282)
T ss_pred cCCCCeEEEecCCCCcCCHHHHHHHHhhCCC-----------------------CceEEEeCCCCCcchhhcHHHHHHHH
Confidence 3359999999999966666554444444432 23478899999999999999777777
Q ss_pred HHHH
Q 012068 454 RSFL 457 (471)
Q Consensus 454 ~~fl 457 (471)
.+|+
T Consensus 276 ~~~~ 279 (282)
T COG0596 276 LAFL 279 (282)
T ss_pred HHHH
Confidence 6654
No 109
>PLN02454 triacylglycerol lipase
Probab=88.34 E-value=1.1 Score=45.83 Aligned_cols=69 Identities=14% Similarity=0.228 Sum_probs=52.5
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCc
Q 012068 154 DNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDN 225 (471)
Q Consensus 154 ~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp 225 (471)
...+.+++...|+...+++|..+- .++|+|||.||-.+-..|..|.+.... ...+++..+..|.|-+..
T Consensus 205 ~~S~r~qvl~~V~~l~~~Yp~~~~-sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 205 KLSARSQLLAKIKELLERYKDEKL-SIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCc-eEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCcccC
Confidence 346788899999999999987543 699999999999999999888765211 123457778888877654
No 110
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=88.07 E-value=1.3 Score=43.53 Aligned_cols=69 Identities=19% Similarity=0.283 Sum_probs=52.2
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccc--cCChHHHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVP--LFQPRRALILF 453 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP--~dqP~~a~~mi 453 (471)
..+|+||+|..|-++|+..++..++++--.|. .+++|.++.+++|+.. ...|+.. .-|
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~-------------------a~V~~~~~~~~~H~~~~~~~~~~a~-~Wl 278 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGG-------------------ADVEYVRYPGGGHLGAAFASAPDAL-AWL 278 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCC-------------------CCEEEEecCCCChhhhhhcCcHHHH-HHH
Confidence 58999999999999999999999988643331 1577899999999965 4666554 555
Q ss_pred HHHHcCCCCCC
Q 012068 454 RSFLAGKQLPK 464 (471)
Q Consensus 454 ~~fl~~~~~~~ 464 (471)
.+-+.|++..+
T Consensus 279 ~~rf~G~~~~~ 289 (290)
T PF03583_consen 279 DDRFAGKPATS 289 (290)
T ss_pred HHHHCCCCCCC
Confidence 55557777644
No 111
>PRK13604 luxD acyl transferase; Provisional
Probab=87.40 E-value=3.3 Score=40.96 Aligned_cols=123 Identities=16% Similarity=0.221 Sum_probs=71.4
Q ss_pred CceEEEEEEEec-CCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccC
Q 012068 64 GRALFYWLTEAA-SSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSY 142 (471)
Q Consensus 64 ~~~lFy~~~es~-~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy 142 (471)
+..|.=|+.+.+ +++...|++|..+ |.|+....|.-+ -.+=+.+-.++|-.|.=.|.|-|-
T Consensus 19 G~~L~Gwl~~P~~~~~~~~~~vIi~H-Gf~~~~~~~~~~-----------------A~~La~~G~~vLrfD~rg~~GeS~ 80 (307)
T PRK13604 19 GQSIRVWETLPKENSPKKNNTILIAS-GFARRMDHFAGL-----------------AEYLSSNGFHVIRYDSLHHVGLSS 80 (307)
T ss_pred CCEEEEEEEcCcccCCCCCCEEEEeC-CCCCChHHHHHH-----------------HHHHHHCCCEEEEecCCCCCCCCC
Confidence 567777777764 3456678888877 566653211111 223345668899999533458884
Q ss_pred ccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 143 TNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 143 ~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
++-. +. +......|+.. ..+|++.. ...++.|.|+|.||.-+...|. ..+++++++.+|+
T Consensus 81 G~~~-~~---t~s~g~~Dl~a-aid~lk~~---~~~~I~LiG~SmGgava~~~A~------------~~~v~~lI~~sp~ 140 (307)
T PRK13604 81 GTID-EF---TMSIGKNSLLT-VVDWLNTR---GINNLGLIAASLSARIAYEVIN------------EIDLSFLITAVGV 140 (307)
T ss_pred Cccc-cC---cccccHHHHHH-HHHHHHhc---CCCceEEEEECHHHHHHHHHhc------------CCCCCEEEEcCCc
Confidence 4322 11 11112345433 23334332 1347999999999987533332 1238889998887
Q ss_pred cC
Q 012068 223 TD 224 (471)
Q Consensus 223 id 224 (471)
.+
T Consensus 141 ~~ 142 (307)
T PRK13604 141 VN 142 (307)
T ss_pred cc
Confidence 66
No 112
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=87.09 E-value=1.3 Score=37.86 Aligned_cols=62 Identities=18% Similarity=0.247 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeecccc
Q 012068 156 RTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVT 223 (471)
Q Consensus 156 ~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~i 223 (471)
...+.+.+.|++..++.| ..++.|+|||-||-.+..+|..+.++... ...+++-+..|.|-+
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~---~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS---SSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT---STTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc---cccceeeeecCCccc
Confidence 345567777888777777 45899999999999999999999876421 135566666666654
No 113
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=86.65 E-value=1.5 Score=40.38 Aligned_cols=64 Identities=20% Similarity=0.150 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHh--CCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCc
Q 012068 156 RTAQDALVFLIRWMSR--FPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDN 225 (471)
Q Consensus 156 ~~a~d~~~fL~~F~~~--fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp 225 (471)
+..+|..++++-..+. --++...+++|+|+|-||+.+..++..+.+... ..++++++..|++|.
T Consensus 47 ~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~------~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 47 AALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGL------PKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTT------CHESEEEEESCHSST
T ss_pred ccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcc------cchhhhhcccccccc
Confidence 4556666655444433 012445689999999999999999988877531 239999999998876
No 114
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=85.41 E-value=3.4 Score=46.03 Aligned_cols=99 Identities=13% Similarity=0.111 Sum_probs=59.7
Q ss_pred CCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCcc---------CCC--C
Q 012068 80 KKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTN---------TSS--N 148 (471)
Q Consensus 80 ~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~---------~~~--~ 148 (471)
..|+|+++||=.|.... |-.+.+ .+. .+-..++-+|.| |.|-|... ... .
T Consensus 448 g~P~VVllHG~~g~~~~-~~~lA~-----------~La------~~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~ 508 (792)
T TIGR03502 448 GWPVVIYQHGITGAKEN-ALAFAG-----------TLA------AAGVATIAIDHP-LHGARSFDANASGVNATNANVLA 508 (792)
T ss_pred CCcEEEEeCCCCCCHHH-HHHHHH-----------HHH------hCCcEEEEeCCC-CCCccccccccccccccccCccc
Confidence 35899999997777665 333322 111 122457777764 77766221 010 1
Q ss_pred CC--------CCCcHHHHHHHHHHHHHHHH----------hCCCCCCCceEEEecccCccchHHHHHH
Q 012068 149 LK--------DSGDNRTAQDALVFLIRWMS----------RFPQYKYREFYIAGESYAGHYVPQLAKK 198 (471)
Q Consensus 149 ~~--------~~~~~~~a~d~~~fL~~F~~----------~fp~~~~~~~yi~GESYgG~yvP~lA~~ 198 (471)
|. +.+..+.+.|++.... .+. .+..+...++++.|||.||..+..++..
T Consensus 509 y~Nl~~l~~aRDn~rQ~v~Dll~L~~-~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 509 YMNLASLLVARDNLRQSILDLLGLRL-SLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred eeccccccccccCHHHHHHHHHHHHH-HHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 10 1155788888887444 333 1233556799999999999998888843
No 115
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=85.39 E-value=0.97 Score=38.46 Aligned_cols=44 Identities=23% Similarity=0.317 Sum_probs=34.9
Q ss_pred hcCceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccc
Q 012068 374 AAGLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHE 440 (471)
Q Consensus 374 ~~girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHm 440 (471)
...++|++.+|..|.+++....+.+.++++. .-.++.|.+++|+
T Consensus 102 ~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~-----------------------~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 102 KIRIPVLFIHGENDPLVPPEQVRRLYEALPG-----------------------PKELYIIPGAGHF 145 (145)
T ss_dssp TTTSEEEEEEETT-SSSHHHHHHHHHHHHCS-----------------------SEEEEEETTS-TT
T ss_pred ccCCcEEEEEECCCCcCCHHHHHHHHHHcCC-----------------------CcEEEEeCCCcCc
Confidence 4468999999999999999999998888761 1247899999996
No 116
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=85.36 E-value=1.2 Score=41.58 Aligned_cols=59 Identities=29% Similarity=0.433 Sum_probs=40.6
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILFRS 455 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~~ 455 (471)
+.+|++.+|+.|.++|....+...+.|+=.+ .++++..+.+.||-++ .+.+..+.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~--------------------~~v~~~~~~g~gH~i~----~~~~~~~~~ 210 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAG--------------------ANVEFHEYPGGGHEIS----PEELRDLRE 210 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT---------------------GEEEEEETT-SSS------HHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcC--------------------CCEEEEEcCCCCCCCC----HHHHHHHHH
Confidence 4899999999999999998888777764211 1467888899999986 355566677
Q ss_pred HHc
Q 012068 456 FLA 458 (471)
Q Consensus 456 fl~ 458 (471)
||.
T Consensus 211 ~l~ 213 (216)
T PF02230_consen 211 FLE 213 (216)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
No 117
>COG0400 Predicted esterase [General function prediction only]
Probab=84.92 E-value=3.3 Score=38.56 Aligned_cols=62 Identities=11% Similarity=0.080 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCccc
Q 012068 155 NRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNYY 227 (471)
Q Consensus 155 ~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~~ 227 (471)
+..++.+.+||....+.+. ...+++++.|-|=|+.++..+..+..+. ++|+++-+|..-+..
T Consensus 77 ~~~~~~~~~~l~~~~~~~g-i~~~~ii~~GfSqGA~ial~~~l~~~~~----------~~~ail~~g~~~~~~ 138 (207)
T COG0400 77 DLETEKLAEFLEELAEEYG-IDSSRIILIGFSQGANIALSLGLTLPGL----------FAGAILFSGMLPLEP 138 (207)
T ss_pred HHHHHHHHHHHHHHHHHhC-CChhheEEEecChHHHHHHHHHHhCchh----------hccchhcCCcCCCCC
Confidence 3456667777777776653 3356899999999999887777655443 889999888876653
No 118
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=84.75 E-value=2.1 Score=40.25 Aligned_cols=60 Identities=17% Similarity=0.218 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccC
Q 012068 157 TAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTD 224 (471)
Q Consensus 157 ~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~id 224 (471)
..+++...+++..+++| ..+++++|||-||-.+..+|..+.++. ...+++.+..|.|-+.
T Consensus 110 ~~~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~-----~~~~i~~~tFg~P~vg 169 (229)
T cd00519 110 LYNQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG-----PGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC-----CCCceEEEEeCCCCCC
Confidence 34445555666666665 458999999999999998888887652 2345778888887653
No 119
>COG0400 Predicted esterase [General function prediction only]
Probab=84.14 E-value=1.5 Score=40.84 Aligned_cols=59 Identities=27% Similarity=0.307 Sum_probs=43.0
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILFRS 455 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~~ 455 (471)
+.||++.+|..|.+||...+++..+.|.-.|.+ ....++. .||.++.+.= +.+++
T Consensus 146 ~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~--------------------v~~~~~~-~GH~i~~e~~----~~~~~ 200 (207)
T COG0400 146 GTPILLSHGTEDPVVPLALAEALAEYLTASGAD--------------------VEVRWHE-GGHEIPPEEL----EAARS 200 (207)
T ss_pred CCeEEEeccCcCCccCHHHHHHHHHHHHHcCCC--------------------EEEEEec-CCCcCCHHHH----HHHHH
Confidence 699999999999999999999988877544443 2334444 9999976444 44455
Q ss_pred HHcC
Q 012068 456 FLAG 459 (471)
Q Consensus 456 fl~~ 459 (471)
|+.+
T Consensus 201 wl~~ 204 (207)
T COG0400 201 WLAN 204 (207)
T ss_pred HHHh
Confidence 6654
No 120
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=83.72 E-value=2.1 Score=37.46 Aligned_cols=44 Identities=16% Similarity=0.199 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHH
Q 012068 156 RTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDY 202 (471)
Q Consensus 156 ~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 202 (471)
.+.+.+...+++....+| ..+++|+|+|.||..+-.+|..+.++
T Consensus 9 ~~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~ 52 (153)
T cd00741 9 SLANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGR 52 (153)
T ss_pred HHHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhc
Confidence 345555555666555556 45899999999999999999888765
No 121
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=83.49 E-value=1.4 Score=40.43 Aligned_cols=38 Identities=24% Similarity=0.386 Sum_probs=30.3
Q ss_pred CCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCccc
Q 012068 177 YREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNYY 227 (471)
Q Consensus 177 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~~ 227 (471)
...+.|.|-|.||.|+-.+|.+. +++. ++.||.+.|..
T Consensus 58 ~~~~~liGSSlGG~~A~~La~~~------------~~~a-vLiNPav~p~~ 95 (187)
T PF05728_consen 58 PENVVLIGSSLGGFYATYLAERY------------GLPA-VLINPAVRPYE 95 (187)
T ss_pred CCCeEEEEEChHHHHHHHHHHHh------------CCCE-EEEcCCCCHHH
Confidence 34599999999999999988755 2555 78899999864
No 122
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=83.19 E-value=1.9 Score=40.93 Aligned_cols=67 Identities=10% Similarity=0.064 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCcc
Q 012068 156 RTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNY 226 (471)
Q Consensus 156 ~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~ 226 (471)
..+..+.+||+...+.. ..++++|.+||.|++-+-.....+...... ++..-.|..|++.+|-++..
T Consensus 74 ~s~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~-~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 74 FSGPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGER-PDVKARFDNVILAAPDIDND 140 (233)
T ss_pred HHHHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccc-hhhHhhhheEEEECCCCCHH
Confidence 34455555554444331 356899999999999988888777766421 11123788999999888764
No 123
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=82.71 E-value=20 Score=34.84 Aligned_cols=89 Identities=8% Similarity=-0.004 Sum_probs=51.4
Q ss_pred HHHHHHHHhcCceEEEEecCCCcccCchhHHHHHHhCCCCCCCCccccee--CC---ee-eeEEEEecCeEEEEEcCCcc
Q 012068 366 LPTYKQLIAAGLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYS--GN---QV-GGWTEVYKGLTFATVRGAGH 439 (471)
Q Consensus 366 ~~~l~~LL~~girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~--~~---~~-~G~~k~~~nLtf~~V~~AGH 439 (471)
.+.++.|-++.+|||+..|-.|.++--.-.++.+... .+.+.+.--.. ++ ++ .-|. +...-.-|.|.+-||
T Consensus 202 ~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f--~~l~Hf~~~~~~seee~~kI~~~f~-~~~~~~sv~f~~dgH 278 (297)
T PF06342_consen 202 KEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF--KGLDHFNIEKEISEEEKPKILKSFA-SGQKGASVFFAKDGH 278 (297)
T ss_pred HHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh--CCccceeeecCCChhHHHHHHHHHh-cCCceeEEEEecCCh
Confidence 4566677677799999999999988666666655543 22221100000 00 00 0000 001233467788999
Q ss_pred ccccCChHHHHHHHHHHH
Q 012068 440 EVPLFQPRRALILFRSFL 457 (471)
Q Consensus 440 mvP~dqP~~a~~mi~~fl 457 (471)
...-.||+-.-+.+...+
T Consensus 279 f~qK~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 279 FQQKFRADLIAEAIKKMF 296 (297)
T ss_pred HHhHHHHHHHHHHHHHhh
Confidence 999999987766666543
No 124
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=81.44 E-value=29 Score=32.49 Aligned_cols=50 Identities=18% Similarity=0.290 Sum_probs=40.9
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRA 449 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a 449 (471)
..|||-.+|-.|-++|...+..+++.++ |=.+-+|.||-|...-+|-+..
T Consensus 199 ~C~VLTvhGs~D~IVPve~AkefAk~i~------------------------nH~L~iIEgADHnyt~~q~~l~ 248 (269)
T KOG4667|consen 199 QCRVLTVHGSEDEIVPVEDAKEFAKIIP------------------------NHKLEIIEGADHNYTGHQSQLV 248 (269)
T ss_pred cCceEEEeccCCceeechhHHHHHHhcc------------------------CCceEEecCCCcCccchhhhHh
Confidence 4799999999999999999999998874 2236788899998877776543
No 125
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=81.38 E-value=1.9 Score=40.05 Aligned_cols=44 Identities=20% Similarity=0.246 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHH
Q 012068 156 RTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIID 201 (471)
Q Consensus 156 ~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 201 (471)
-+-.|+.++...|++.++ ++|||+|+|||=|+..+-.|.+...+
T Consensus 75 ~ay~DV~~AF~~yL~~~n--~GRPfILaGHSQGs~~l~~LL~e~~~ 118 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYN--NGRPFILAGHSQGSMHLLRLLKEEIA 118 (207)
T ss_pred hhHHHHHHHHHHHHHhcC--CCCCEEEEEeChHHHHHHHHHHHHhc
Confidence 355788888999998886 48999999999999987777665544
No 126
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=81.00 E-value=3.4 Score=43.10 Aligned_cols=41 Identities=15% Similarity=-0.023 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHH
Q 012068 155 NRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKK 198 (471)
Q Consensus 155 ~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~ 198 (471)
++..+++.+.++..++..+ .+++.|.|||.||..+-.++..
T Consensus 142 ~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 142 PETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHHH
Confidence 4567788888888877653 5799999999999887776654
No 127
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=80.73 E-value=14 Score=35.60 Aligned_cols=58 Identities=14% Similarity=0.082 Sum_probs=42.4
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeecccc
Q 012068 153 GDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVT 223 (471)
Q Consensus 153 ~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~i 223 (471)
+.++.|+...+.|+ +..|+ + |.+|.|.|+||.-+=.+|.++..+-.. ..-++|.+.+.
T Consensus 46 ~l~~~a~~yv~~Ir---~~QP~--G-Py~L~G~S~GG~vA~evA~qL~~~G~~-------Va~L~llD~~~ 103 (257)
T COG3319 46 SLDDMAAAYVAAIR---RVQPE--G-PYVLLGWSLGGAVAFEVAAQLEAQGEE-------VAFLGLLDAVP 103 (257)
T ss_pred CHHHHHHHHHHHHH---HhCCC--C-CEEEEeeccccHHHHHHHHHHHhCCCe-------EEEEEEeccCC
Confidence 56677777766665 46775 3 999999999999999999999886322 44555555443
No 128
>PLN02571 triacylglycerol lipase
Probab=80.25 E-value=4.6 Score=41.46 Aligned_cols=70 Identities=11% Similarity=0.123 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhcc----CCCCeeeeeeeEeeccccCc
Q 012068 155 NRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSA----YSRPIINLKGFIVGNAVTDN 225 (471)
Q Consensus 155 ~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~----~~~~~inLkGi~IGNg~idp 225 (471)
..+.+++.+.|+.+.+++|.. ..+++|+|||.||-.+-..|..|....-. .+...+++..+..|.|-+..
T Consensus 204 ~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 204 TSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred hhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 356678888899988888764 34799999999999999989888753211 01223556777778776653
No 129
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=80.23 E-value=3.9 Score=37.38 Aligned_cols=63 Identities=14% Similarity=0.234 Sum_probs=51.7
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccC
Q 012068 153 GDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTD 224 (471)
Q Consensus 153 ~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~id 224 (471)
+.+++|.|+-+.++.+.++. ..+++.|+|-|+|.=-+|.+..++...-+. .+++|++..+-..
T Consensus 46 tP~~~a~Dl~~~i~~y~~~w---~~~~vvLiGYSFGADvlP~~~nrLp~~~r~------~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 46 TPEQTAADLARIIRHYRARW---GRKRVVLIGYSFGADVLPFIYNRLPAALRA------RVAQVVLLSPSTT 108 (192)
T ss_pred CHHHHHHHHHHHHHHHHHHh---CCceEEEEeecCCchhHHHHHhhCCHHHHh------heeEEEEeccCCc
Confidence 67899999999999888764 577899999999999999999999876432 3778887766543
No 130
>PRK13604 luxD acyl transferase; Provisional
Probab=80.21 E-value=3.3 Score=40.97 Aligned_cols=46 Identities=15% Similarity=0.210 Sum_probs=38.2
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCcccccc
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPL 443 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~ 443 (471)
..+||+++|+.|..||..+++...++++-. +-.++.+.||+|...-
T Consensus 202 ~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~----------------------~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 202 DIPFIAFTANNDSWVKQSEVIDLLDSIRSE----------------------QCKLYSLIGSSHDLGE 247 (307)
T ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHhccC----------------------CcEEEEeCCCccccCc
Confidence 589999999999999999999999986421 2347899999998753
No 131
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=79.37 E-value=8.2 Score=34.63 Aligned_cols=77 Identities=16% Similarity=0.201 Sum_probs=47.9
Q ss_pred cCCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhc
Q 012068 125 REANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNS 204 (471)
Q Consensus 125 ~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~ 204 (471)
....++-+|.| |.|.+. ... .+.+..++...+.+.. ..+ ..++.++|+|+||..+-.+|.++.++.
T Consensus 24 ~~~~v~~~~~~-g~~~~~--~~~----~~~~~~~~~~~~~l~~---~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~- 89 (212)
T smart00824 24 GRRDVSALPLP-GFGPGE--PLP----ASADALVEAQAEAVLR---AAG---GRPFVLVGHSSGGLLAHAVAARLEARG- 89 (212)
T ss_pred CCccEEEecCC-CCCCCC--CCC----CCHHHHHHHHHHHHHH---hcC---CCCeEEEEECHHHHHHHHHHHHHHhCC-
Confidence 34678889976 444321 111 1344555555554442 232 458999999999999999998887642
Q ss_pred cCCCCeeeeeeeEeecc
Q 012068 205 AYSRPIINLKGFIVGNA 221 (471)
Q Consensus 205 ~~~~~~inLkGi~IGNg 221 (471)
..++++++.++
T Consensus 90 ------~~~~~l~~~~~ 100 (212)
T smart00824 90 ------IPPAAVVLLDT 100 (212)
T ss_pred ------CCCcEEEEEcc
Confidence 22666666554
No 132
>PRK11071 esterase YqiA; Provisional
Probab=78.09 E-value=4.9 Score=36.66 Aligned_cols=78 Identities=15% Similarity=0.189 Sum_probs=47.5
Q ss_pred CeEEEECCCCChhhhhhh--hhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHHHH
Q 012068 82 PLVLWLNGGPGCSSVAYG--ASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQ 159 (471)
Q Consensus 82 PlilWlnGGPG~SS~~~g--~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~ 159 (471)
|.||+|+|-+|++.. +- .+.+. +..+ . ...+++.+|.| |+. ++.++
T Consensus 2 p~illlHGf~ss~~~-~~~~~~~~~-----------l~~~--~--~~~~v~~~dl~---g~~-------------~~~~~ 49 (190)
T PRK11071 2 STLLYLHGFNSSPRS-AKATLLKNW-----------LAQH--H--PDIEMIVPQLP---PYP-------------ADAAE 49 (190)
T ss_pred CeEEEECCCCCCcch-HHHHHHHHH-----------HHHh--C--CCCeEEeCCCC---CCH-------------HHHHH
Confidence 689999998888775 22 11110 0000 0 12457888887 330 13344
Q ss_pred HHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHH
Q 012068 160 DALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKK 198 (471)
Q Consensus 160 d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~ 198 (471)
+ +.++.+.. ..++++|.|.|.||.++-.+|.+
T Consensus 50 ~----l~~l~~~~---~~~~~~lvG~S~Gg~~a~~~a~~ 81 (190)
T PRK11071 50 L----LESLVLEH---GGDPLGLVGSSLGGYYATWLSQC 81 (190)
T ss_pred H----HHHHHHHc---CCCCeEEEEECHHHHHHHHHHHH
Confidence 4 44444443 24589999999999998888864
No 133
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=77.70 E-value=1.4 Score=40.48 Aligned_cols=73 Identities=16% Similarity=0.114 Sum_probs=52.2
Q ss_pred CCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeee
Q 012068 136 AGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKG 215 (471)
Q Consensus 136 vGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkG 215 (471)
+-+||-+++... +.++...++.++++--++.+|. ...+-+.|||-|.|.+..+..++.+ ..+.|
T Consensus 101 asvgY~l~~q~h-----tL~qt~~~~~~gv~filk~~~n--~k~l~~gGHSaGAHLa~qav~R~r~---------prI~g 164 (270)
T KOG4627|consen 101 ASVGYNLCPQVH-----TLEQTMTQFTHGVNFILKYTEN--TKVLTFGGHSAGAHLAAQAVMRQRS---------PRIWG 164 (270)
T ss_pred EEeccCcCcccc-----cHHHHHHHHHHHHHHHHHhccc--ceeEEEcccchHHHHHHHHHHHhcC---------chHHH
Confidence 345776665432 5678889999998888888874 3359999999999987776666422 23778
Q ss_pred eEeeccccC
Q 012068 216 FIVGNAVTD 224 (471)
Q Consensus 216 i~IGNg~id 224 (471)
+++-+|+-+
T Consensus 165 l~l~~GvY~ 173 (270)
T KOG4627|consen 165 LILLCGVYD 173 (270)
T ss_pred HHHHhhHhh
Confidence 888777744
No 134
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=75.89 E-value=10 Score=39.54 Aligned_cols=50 Identities=16% Similarity=0.216 Sum_probs=41.6
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHH
Q 012068 153 GDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDY 202 (471)
Q Consensus 153 ~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 202 (471)
+.+|+..|+.+||+.--.+|+.-.+.|++.+|-||.|-...-+-.+..+-
T Consensus 147 Ss~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel 196 (514)
T KOG2182|consen 147 SSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPEL 196 (514)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchh
Confidence 78899999999999988889876666999999999998877666655554
No 135
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=75.53 E-value=6.3 Score=37.25 Aligned_cols=52 Identities=25% Similarity=0.185 Sum_probs=37.1
Q ss_pred HHHHHHHh-CCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCcc
Q 012068 164 FLIRWMSR-FPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNY 226 (471)
Q Consensus 164 fL~~F~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~ 226 (471)
-|..|++. ++-...+ ..|+|.|.||.-+-.+|.+-.+. +.+++..+|.+++.
T Consensus 101 el~p~i~~~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd~----------F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDR-RAIAGHSMGGYGALYLALRHPDL----------FGAVIAFSGALDPS 153 (251)
T ss_dssp HHHHHHHHHSSEEECC-EEEEEETHHHHHHHHHHHHSTTT----------ESEEEEESEESETT
T ss_pred cchhHHHHhcccccce-eEEeccCCCcHHHHHHHHhCccc----------cccccccCcccccc
Confidence 34444433 4433333 89999999999888888765554 89999999988775
No 136
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=74.76 E-value=8.9 Score=36.63 Aligned_cols=107 Identities=17% Similarity=0.175 Sum_probs=68.1
Q ss_pred CCCCeEEEECCCCChh-hhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHH
Q 012068 79 LKKPLVLWLNGGPGCS-SVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRT 157 (471)
Q Consensus 79 ~~~PlilWlnGGPG~S-S~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~ 157 (471)
...+.+|+.+|--.-- -| .-+|.+ .|-.=+.|+.=.|- -|-|.|.++..+. +.-..
T Consensus 58 ~~~~~lly~hGNa~Dlgq~-~~~~~~-----------------l~~~ln~nv~~~DY-SGyG~S~G~psE~----n~y~D 114 (258)
T KOG1552|consen 58 AAHPTLLYSHGNAADLGQM-VELFKE-----------------LSIFLNCNVVSYDY-SGYGRSSGKPSER----NLYAD 114 (258)
T ss_pred ccceEEEEcCCcccchHHH-HHHHHH-----------------HhhcccceEEEEec-ccccccCCCcccc----cchhh
Confidence 3459999999861111 12 133332 23334567888885 7999998876552 45556
Q ss_pred HHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCc
Q 012068 158 AQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDN 225 (471)
Q Consensus 158 a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp 225 (471)
++..+++|++ ++- +..++.|+|.|-|..-.-.+|. +. . +.|+++-+|+++-
T Consensus 115 i~avye~Lr~---~~g--~~~~Iil~G~SiGt~~tv~Las----r~------~--~~alVL~SPf~S~ 165 (258)
T KOG1552|consen 115 IKAVYEWLRN---RYG--SPERIILYGQSIGTVPTVDLAS----RY------P--LAAVVLHSPFTSG 165 (258)
T ss_pred HHHHHHHHHh---hcC--CCceEEEEEecCCchhhhhHhh----cC------C--cceEEEeccchhh
Confidence 7777777765 231 3568999999999874223332 21 2 8999999998764
No 137
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=74.21 E-value=18 Score=27.88 Aligned_cols=78 Identities=19% Similarity=0.193 Sum_probs=50.0
Q ss_pred ceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCcc
Q 012068 65 RALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTN 144 (471)
Q Consensus 65 ~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~ 144 (471)
..||+..++.++. .+.+|+.++|--..|.- |..+.+ .+. .+-.+|+-+|+ .|-|.|-+.
T Consensus 2 ~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~r-y~~~a~-----------~L~------~~G~~V~~~D~-rGhG~S~g~ 60 (79)
T PF12146_consen 2 TKLFYRRWKPENP--PKAVVVIVHGFGEHSGR-YAHLAE-----------FLA------EQGYAVFAYDH-RGHGRSEGK 60 (79)
T ss_pred cEEEEEEecCCCC--CCEEEEEeCCcHHHHHH-HHHHHH-----------HHH------hCCCEEEEECC-CcCCCCCCc
Confidence 3577776655332 57899999987555555 555543 222 23457889997 799999754
Q ss_pred CCCCCCCCCcHHHHHHHHHHHH
Q 012068 145 TSSNLKDSGDNRTAQDALVFLI 166 (471)
Q Consensus 145 ~~~~~~~~~~~~~a~d~~~fL~ 166 (471)
... . .+.++..+|+..|+|
T Consensus 61 rg~--~-~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 61 RGH--I-DSFDDYVDDLHQFIQ 79 (79)
T ss_pred ccc--c-CCHHHHHHHHHHHhC
Confidence 332 1 256778888877764
No 138
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=73.99 E-value=6.6 Score=38.06 Aligned_cols=42 Identities=17% Similarity=0.186 Sum_probs=32.7
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHH
Q 012068 154 DNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQL 195 (471)
Q Consensus 154 ~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~l 195 (471)
-.+++..+.+.+.......|+=..-++|++|||-|..=+-..
T Consensus 85 a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~a 126 (289)
T PF10081_consen 85 AREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAA 126 (289)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhh
Confidence 456788889999998888988655569999999987644333
No 139
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=73.98 E-value=14 Score=36.80 Aligned_cols=142 Identities=16% Similarity=0.134 Sum_probs=67.6
Q ss_pred CceEEEEEEEecCCCCCCCeEEEECCCCChhhhhh--hhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCcccc
Q 012068 64 GRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAY--GASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFS 141 (471)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~--g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfS 141 (471)
+..++=|++.-++.....|.||.++|..|.+.... -.+...|=..+..+-...- .+..+..-...+..-|+-
T Consensus 66 g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg------~~~~d~~~~~~~~~~g~~ 139 (320)
T PF05448_consen 66 GSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQG------GRSPDYRGSSGGTLKGHI 139 (320)
T ss_dssp GEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTS------SSS-B-SSBSSS-SSSST
T ss_pred CCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCC------CCCCCccccCCCCCccHH
Confidence 56777777766544678899999999988765410 1234444333322110000 000000000011111221
Q ss_pred CccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeecc
Q 012068 142 YTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNA 221 (471)
Q Consensus 142 y~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg 221 (471)
.-...+.....=-..+..|.+.+ ..|+...|+...+++.++|+|-||...-.+|. +.++ +++++...|
T Consensus 140 ~~g~~~~~e~~yyr~~~~D~~ra-vd~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld~r----------v~~~~~~vP 207 (320)
T PF05448_consen 140 TRGIDDNPEDYYYRRVYLDAVRA-VDFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LDPR----------VKAAAADVP 207 (320)
T ss_dssp TTTTTS-TTT-HHHHHHHHHHHH-HHHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HSST-----------SEEEEESE
T ss_pred hcCccCchHHHHHHHHHHHHHHH-HHHHHhCCCcCcceEEEEeecCchHHHHHHHH-hCcc----------ccEEEecCC
Confidence 10000000000011244555563 45677899998889999999999998776664 3322 777777766
Q ss_pred cc
Q 012068 222 VT 223 (471)
Q Consensus 222 ~i 223 (471)
++
T Consensus 208 ~l 209 (320)
T PF05448_consen 208 FL 209 (320)
T ss_dssp SS
T ss_pred Cc
Confidence 53
No 140
>PLN02719 triacylglycerol lipase
Probab=73.10 E-value=9.8 Score=40.07 Aligned_cols=71 Identities=15% Similarity=0.209 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCC--CCceEEEecccCccchHHHHHHHHHHhcc--CCCCeeeeeeeEeeccccCc
Q 012068 155 NRTAQDALVFLIRWMSRFPQYK--YREFYIAGESYAGHYVPQLAKKIIDYNSA--YSRPIINLKGFIVGNAVTDN 225 (471)
Q Consensus 155 ~~~a~d~~~fL~~F~~~fp~~~--~~~~yi~GESYgG~yvP~lA~~i~~~n~~--~~~~~inLkGi~IGNg~idp 225 (471)
..+.+++.+.|+...+.+|... ...+.|+|||.||-.+.-.|..|.+..-+ .....+++.-+..|.|-+..
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN 347 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGN 347 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccC
Confidence 4567888899999998888653 34799999999999999999888764211 01123445556666665543
No 141
>PLN02753 triacylglycerol lipase
Probab=72.75 E-value=9.1 Score=40.44 Aligned_cols=73 Identities=14% Similarity=0.114 Sum_probs=50.8
Q ss_pred CcHHHHHHHHHHHHHHHHhCCC--CCCCceEEEecccCccchHHHHHHHHHHhcc--CCCCeeeeeeeEeeccccCc
Q 012068 153 GDNRTAQDALVFLIRWMSRFPQ--YKYREFYIAGESYAGHYVPQLAKKIIDYNSA--YSRPIINLKGFIVGNAVTDN 225 (471)
Q Consensus 153 ~~~~~a~d~~~fL~~F~~~fp~--~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~--~~~~~inLkGi~IGNg~idp 225 (471)
+...+.+++.+.|+...+.+|. .....++|+|||.||-.+...|..|.+..-. .....+++.-+..|.|-+..
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN 361 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGN 361 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccC
Confidence 3446788899999999888864 2345799999999999999999888764211 11223456666667665543
No 142
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=72.74 E-value=5.4 Score=40.71 Aligned_cols=61 Identities=21% Similarity=0.149 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCC-CceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCcc
Q 012068 156 RTAQDALVFLIRWMSRFPQYKY-REFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNY 226 (471)
Q Consensus 156 ~~a~d~~~fL~~F~~~fp~~~~-~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~ 226 (471)
-.|.|...+|..-.+++|.... .|+.+.|.||||.. ..++.+|.= =.+.||+=-++|+-|.
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yl-a~l~~k~aP---------~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYL-AHLCAKIAP---------WLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHH-HHHHHhhCc---------cceeEEEecCccccch
Confidence 3688899999999999999875 79999999999854 455555532 2366776666666654
No 143
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=72.42 E-value=7.1 Score=40.47 Aligned_cols=58 Identities=12% Similarity=0.009 Sum_probs=45.0
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILFRS 455 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~~ 455 (471)
.++||+.+|..|.++|....+.+..... +..++.+.++ | ..++|+.++..+.+
T Consensus 355 ~~PvLiI~G~~D~ivP~~~a~~l~~~~~------------------------~~~l~~i~~~-~--~~e~~~~~~~~i~~ 407 (414)
T PRK05077 355 PTPMLSGYWKNDPFSPEEDSRLIASSSA------------------------DGKLLEIPFK-P--VYRNFDKALQEISD 407 (414)
T ss_pred CCcEEEEecCCCCCCCHHHHHHHHHhCC------------------------CCeEEEccCC-C--ccCCHHHHHHHHHH
Confidence 4899999999999999999997665531 2235677776 3 34699999999999
Q ss_pred HHcCC
Q 012068 456 FLAGK 460 (471)
Q Consensus 456 fl~~~ 460 (471)
|+..+
T Consensus 408 wL~~~ 412 (414)
T PRK05077 408 WLEDR 412 (414)
T ss_pred HHHHH
Confidence 98653
No 144
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=71.61 E-value=11 Score=37.76 Aligned_cols=93 Identities=22% Similarity=0.214 Sum_probs=54.7
Q ss_pred CCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCc-----cCCceeEEecCCCccccCccCCCCCC
Q 012068 76 SSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWS-----REANILFLESPAGVGFSYTNTSSNLK 150 (471)
Q Consensus 76 ~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~-----~~anllfiDqPvGtGfSy~~~~~~~~ 150 (471)
.+++++-.+|+.||-=+| .|+== -+..-...|. ..+|++..-- .|||+|.+..
T Consensus 132 ~~a~~~RWiL~s~GNg~~--------~E~~~--------~~~~~~~~~~~~ak~~~aNvl~fNY-pGVg~S~G~~----- 189 (365)
T PF05677_consen 132 PEAKPQRWILVSNGNGEC--------YENRA--------MLDYKDDWIQRFAKELGANVLVFNY-PGVGSSTGPP----- 189 (365)
T ss_pred CCCCCCcEEEEEcCChHH--------hhhhh--------hhccccHHHHHHHHHcCCcEEEECC-CccccCCCCC-----
Confidence 356788999999976222 22100 0001112232 4689999995 5999997643
Q ss_pred CCCcHHHHHHHHHHHHHHHHhCC-CCCCCceEEEecccCccchH
Q 012068 151 DSGDNRTAQDALVFLIRWMSRFP-QYKYREFYIAGESYAGHYVP 193 (471)
Q Consensus 151 ~~~~~~~a~d~~~fL~~F~~~fp-~~~~~~~yi~GESYgG~yvP 193 (471)
+.++.+++- +++.+++...+ .-+.+.+.+.|+|-||--..
T Consensus 190 --s~~dLv~~~-~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa 230 (365)
T PF05677_consen 190 --SRKDLVKDY-QACVRYLRDEEQGPKAKNIILYGHSLGGGVQA 230 (365)
T ss_pred --CHHHHHHHH-HHHHHHHHhcccCCChheEEEeeccccHHHHH
Confidence 233444443 33555554433 23456899999999997544
No 145
>KOG3101 consensus Esterase D [General function prediction only]
Probab=71.23 E-value=24 Score=32.83 Aligned_cols=154 Identities=16% Similarity=0.173 Sum_probs=76.1
Q ss_pred eeEEeeEEecC----CCCceEEEEEEEecC--CCCCCCeEEEECCCCChh--------hhhhhhhhhcCCeEEcCCCC--
Q 012068 51 SQFSGYVTVNE----NHGRALFYWLTEAAS--SALKKPLVLWLNGGPGCS--------SVAYGASEEIGPFRINRNGS-- 114 (471)
Q Consensus 51 ~~~sGyl~v~~----~~~~~lFy~~~es~~--~~~~~PlilWlnGGPG~S--------S~~~g~f~e~GP~~~~~~~~-- 114 (471)
+.+-|+..|-. +.+-.|=|--|--.. +.+.-|+++||.| --|. +.. -.-.++|=..|.+|..
T Consensus 8 k~f~G~q~vy~H~S~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSG-LTCT~~Nfi~Ksg~q-q~As~hgl~vV~PDTSPR 85 (283)
T KOG3101|consen 8 KCFGGRQKVYKHNSNTLKCSMTFGVYLPPDAPRGKRCPVLFYLSG-LTCTHENFIEKSGFQ-QQASKHGLAVVAPDTSPR 85 (283)
T ss_pred ccccceeeeeeccccccccceEEEEecCCCcccCCcCceEEEecC-CcccchhhHhhhhHH-HhHhhcCeEEECCCCCCC
Confidence 45666666643 123356554443332 2344699999995 3452 221 2223455555666542
Q ss_pred --ccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHH-hCCCCCCCceEEEecccCccc
Q 012068 115 --SLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMS-RFPQYKYREFYIAGESYAGHY 191 (471)
Q Consensus 115 --~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~-~fp~~~~~~~yi~GESYgG~y 191 (471)
.+.-.+.|| |=-.|.||= .+.+..-+. ..-+.-+.+.+=|-+-+. .+-.+...+.-|+|+|.|||=
T Consensus 86 G~~v~g~~esw---------DFG~GAGFY-vnAt~epw~-~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhG 154 (283)
T KOG3101|consen 86 GVEVAGDDESW---------DFGQGAGFY-VNATQEPWA-KHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHG 154 (283)
T ss_pred ccccCCCcccc---------cccCCceeE-EecccchHh-hhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCc
Confidence 122234566 434566663 232221110 112233333333333332 222233446899999999995
Q ss_pred hHHHHHHHHHHhccCCCCeeeeeeeEeeccccCccc
Q 012068 192 VPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNYY 227 (471)
Q Consensus 192 vP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~~ 227 (471)
+-.++.+=.. ..|+|.--.|.++|..
T Consensus 155 Al~~~Lkn~~----------kykSvSAFAPI~NP~~ 180 (283)
T KOG3101|consen 155 ALTIYLKNPS----------KYKSVSAFAPICNPIN 180 (283)
T ss_pred eEEEEEcCcc----------cccceeccccccCccc
Confidence 4444322111 3667777777777753
No 146
>PRK04940 hypothetical protein; Provisional
Probab=70.13 E-value=7.7 Score=35.18 Aligned_cols=59 Identities=10% Similarity=-0.007 Sum_probs=38.3
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCccc
Q 012068 153 GDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNYY 227 (471)
Q Consensus 153 ~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~~ 227 (471)
...++...+.+.+.++... .. ..++.|.|-|-||.|+..+|.+.- ++. +|.||.+.|..
T Consensus 38 ~P~~a~~~l~~~i~~~~~~--~~-~~~~~liGSSLGGyyA~~La~~~g------------~~a-VLiNPAv~P~~ 96 (180)
T PRK04940 38 HPKHDMQHLLKEVDKMLQL--SD-DERPLICGVGLGGYWAERIGFLCG------------IRQ-VIFNPNLFPEE 96 (180)
T ss_pred CHHHHHHHHHHHHHHhhhc--cC-CCCcEEEEeChHHHHHHHHHHHHC------------CCE-EEECCCCChHH
Confidence 3445555555544443321 11 247899999999999999987641 444 56799999964
No 147
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=69.43 E-value=1.1 Score=44.92 Aligned_cols=105 Identities=15% Similarity=0.207 Sum_probs=58.2
Q ss_pred CCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCc-cCCceeEEecCCCccccCccCCCCCCCCCcHH
Q 012068 78 ALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWS-REANILFLESPAGVGFSYTNTSSNLKDSGDNR 156 (471)
Q Consensus 78 ~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~-~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~ 156 (471)
..++|++|.++|=-+..+.. .-+. .+..+-.... ...|||-||.-.+..-.|.... .+...
T Consensus 68 n~~~pt~iiiHGw~~~~~~~-~~~~------------~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~-----~n~~~ 129 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSE-SWIQ------------DMIKALLQKDTGDYNVIVVDWSRGASNNYPQAV-----ANTRL 129 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TT-THHH------------HHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHH-----HHHHH
T ss_pred CCCCCeEEEEcCcCCcccch-hHHH------------HHHHHHHhhccCCceEEEEcchhhccccccchh-----hhHHH
Confidence 35789999999844443110 0111 1222212221 4689999998655543332210 14556
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHH
Q 012068 157 TAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIID 201 (471)
Q Consensus 157 ~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 201 (471)
+++.+-+||+...... .+...+++|.|+|.|+|.+-.+++++..
T Consensus 130 vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 130 VGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp HHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 7777778777766432 2334589999999999998888887766
No 148
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=69.04 E-value=5.8 Score=36.24 Aligned_cols=59 Identities=29% Similarity=0.363 Sum_probs=43.8
Q ss_pred CCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHH
Q 012068 135 PAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIID 201 (471)
Q Consensus 135 PvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 201 (471)
=.|||-|.++-+.+. ++.+.|....++++ +++|+-. -+.++|-|+|+..+-.+|.+..+
T Consensus 68 fRgVG~S~G~fD~Gi---GE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 68 FRGVGRSQGEFDNGI---GELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred ccccccccCcccCCc---chHHHHHHHHHHHH---hhCCCch--hhhhcccchHHHHHHHHHHhccc
Confidence 479999998877664 56666777666666 4788643 37999999999877777776654
No 149
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=68.05 E-value=15 Score=39.65 Aligned_cols=125 Identities=20% Similarity=0.242 Sum_probs=70.7
Q ss_pred eEEEEEEEecC--CC-CCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCC----------ceeEE
Q 012068 66 ALFYWLTEAAS--SA-LKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREA----------NILFL 132 (471)
Q Consensus 66 ~lFy~~~es~~--~~-~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~a----------nllfi 132 (471)
-+.|-...+-+ +| ++.|+++..-||||.- ++.|.++|.+.. =|++|
T Consensus 624 ~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQ---------------------lVnnsfkgi~ylR~~~LaslGy~Vv~I 682 (867)
T KOG2281|consen 624 LTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQ---------------------LVNNSFKGIQYLRFCRLASLGYVVVFI 682 (867)
T ss_pred cEEEEEEEccccCCCCCCCceEEEEcCCCceE---------------------EeeccccceehhhhhhhhhcceEEEEE
Confidence 35565554432 33 5689999999999864 444777777642 35899
Q ss_pred ecCCCccc---cCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCC-CCceEEEecccCccchHHHHHHHHHHhccCCC
Q 012068 133 ESPAGVGF---SYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYK-YREFYIAGESYAGHYVPQLAKKIIDYNSAYSR 208 (471)
Q Consensus 133 DqPvGtGf---Sy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~-~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~ 208 (471)
|. .|+-- -+...-.. +.+.. .++|-.+.||-.-++.- |. -..+-|-|-||||........+-.+
T Consensus 683 Dn-RGS~hRGlkFE~~ik~--kmGqV-E~eDQVeglq~Laeq~g-fidmdrV~vhGWSYGGYLSlm~L~~~P~------- 750 (867)
T KOG2281|consen 683 DN-RGSAHRGLKFESHIKK--KMGQV-EVEDQVEGLQMLAEQTG-FIDMDRVGVHGWSYGGYLSLMGLAQYPN------- 750 (867)
T ss_pred cC-CCccccchhhHHHHhh--ccCee-eehhhHHHHHHHHHhcC-cccchheeEeccccccHHHHHHhhcCcc-------
Confidence 95 55421 11000000 01111 23444455655544432 22 2368999999999865443332211
Q ss_pred CeeeeeeeEeeccccCcc
Q 012068 209 PIINLKGFIVGNAVTDNY 226 (471)
Q Consensus 209 ~~inLkGi~IGNg~idp~ 226 (471)
-++-.+-|.|++++.
T Consensus 751 ---IfrvAIAGapVT~W~ 765 (867)
T KOG2281|consen 751 ---IFRVAIAGAPVTDWR 765 (867)
T ss_pred ---eeeEEeccCcceeee
Confidence 177777888888876
No 150
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=67.79 E-value=13 Score=36.56 Aligned_cols=45 Identities=20% Similarity=0.134 Sum_probs=37.6
Q ss_pred CCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCccc
Q 012068 177 YREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNYY 227 (471)
Q Consensus 177 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~~ 227 (471)
.+++.|+|+|-||+.+..+|....+.. ...+++.++..|++|...
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~~------~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDRG------LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhcC------CCCceEEEEEecccCCcc
Confidence 567999999999999999999887752 244889999999998864
No 151
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=67.72 E-value=37 Score=31.91 Aligned_cols=96 Identities=14% Similarity=0.063 Sum_probs=49.5
Q ss_pred CCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHHHHH
Q 012068 80 KKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQ 159 (471)
Q Consensus 80 ~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~ 159 (471)
+..-||+++|--|+..-. --+...- .. +. ....+....++.-+|=+ .=+|.-. .....+.++
T Consensus 3 ~g~pVlFIhG~~Gs~~q~-rsl~~~~----~~---~~--~~~~~~~~~d~ft~df~--~~~s~~~------g~~l~~q~~ 64 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQV-RSLASEL----QR---KA--LLNDNSSHFDFFTVDFN--EELSAFH------GRTLQRQAE 64 (225)
T ss_pred CCCEEEEECcCCCCHhHH-HHHHHHH----hh---hh--hhccCccceeEEEeccC--ccccccc------cccHHHHHH
Confidence 456789999988877642 2222110 00 00 11122233555555522 1111111 112334566
Q ss_pred HHHHHHHHHHHhC--CCCCCCceEEEecccCccchH
Q 012068 160 DALVFLIRWMSRF--PQYKYREFYIAGESYAGHYVP 193 (471)
Q Consensus 160 d~~~fL~~F~~~f--p~~~~~~~yi~GESYgG~yvP 193 (471)
.+.+.++...+.. ..-..+++.|.|||.||.-+-
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar 100 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVAR 100 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHH
Confidence 6666676666554 122466899999999997433
No 152
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=67.57 E-value=42 Score=35.24 Aligned_cols=34 Identities=18% Similarity=0.151 Sum_probs=24.7
Q ss_pred HHHHHHHHHhCCCCCCCceEEEecccCccchHHHH
Q 012068 162 LVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLA 196 (471)
Q Consensus 162 ~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA 196 (471)
++++++..+.|-.= ..++-|+|||-|++-+-.+.
T Consensus 165 LkWV~~NIe~FGGD-p~NVTl~GeSAGa~si~~Ll 198 (491)
T COG2272 165 LKWVRDNIEAFGGD-PQNVTLFGESAGAASILTLL 198 (491)
T ss_pred HHHHHHHHHHhCCC-ccceEEeeccchHHHHHHhh
Confidence 56777777777543 34799999999998665544
No 153
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=66.99 E-value=9.4 Score=36.49 Aligned_cols=61 Identities=20% Similarity=0.271 Sum_probs=46.1
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILFRS 455 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~~ 455 (471)
..||||++|..|-++|+....+......=+ ....+|+||||.-..--| .-.+.+++
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~k~~-----------------------~epl~v~g~gH~~~~~~~-~yi~~l~~ 247 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERCKEK-----------------------VEPLWVKGAGHNDIELYP-EYIEHLRR 247 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhcccc-----------------------CCCcEEecCCCcccccCH-HHHHHHHH
Confidence 369999999999999999888877664311 235788999999887777 44566777
Q ss_pred HHcCC
Q 012068 456 FLAGK 460 (471)
Q Consensus 456 fl~~~ 460 (471)
|+...
T Consensus 248 f~~~~ 252 (258)
T KOG1552|consen 248 FISSV 252 (258)
T ss_pred HHHHh
Confidence 77543
No 154
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=66.98 E-value=6 Score=36.91 Aligned_cols=47 Identities=17% Similarity=0.275 Sum_probs=36.8
Q ss_pred HHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 165 LIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 165 L~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
-.+|++.+|+-..+++-|.|-|.||-.+-.+|.++.+ ++.|+..||.
T Consensus 9 Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~-----------i~avVa~~ps 55 (213)
T PF08840_consen 9 AIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ-----------ISAVVAISPS 55 (213)
T ss_dssp HHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS-----------EEEEEEES--
T ss_pred HHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC-----------ccEEEEeCCc
Confidence 3467889999988899999999999999999987752 8888887775
No 155
>PLN02324 triacylglycerol lipase
Probab=66.56 E-value=15 Score=37.71 Aligned_cols=48 Identities=10% Similarity=0.021 Sum_probs=38.5
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHH
Q 012068 154 DNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDY 202 (471)
Q Consensus 154 ~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 202 (471)
...+-+++.+.|+..++.+|.. ...+.|+|||.||-.+...|..|.+.
T Consensus 192 k~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~ 239 (415)
T PLN02324 192 TTSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYG 239 (415)
T ss_pred hhHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHh
Confidence 3457778888889988888753 23799999999999998888888764
No 156
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=65.89 E-value=15 Score=34.69 Aligned_cols=40 Identities=25% Similarity=0.469 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHH
Q 012068 159 QDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDY 202 (471)
Q Consensus 159 ~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 202 (471)
+...++++...+.+++ +++|+|||=||..+-+.|..+.+.
T Consensus 69 ~~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~ 108 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDE 108 (224)
T ss_pred HHHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHH
Confidence 3445667776666653 699999999999999999886554
No 157
>PLN02408 phospholipase A1
Probab=65.82 E-value=15 Score=37.21 Aligned_cols=46 Identities=13% Similarity=0.051 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHH
Q 012068 156 RTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDY 202 (471)
Q Consensus 156 ~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 202 (471)
.+.+++.+-|+...+.+|.. ...++|+|||.||-.+-..|..|.+.
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~ 224 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTT 224 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHh
Confidence 46677888888888888864 23699999999999999988888764
No 158
>PLN02802 triacylglycerol lipase
Probab=61.73 E-value=17 Score=38.31 Aligned_cols=64 Identities=13% Similarity=0.128 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccC
Q 012068 156 RTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTD 224 (471)
Q Consensus 156 ~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~id 224 (471)
.+.+++.+-|+.+++.+|.- ...++|+|||.||-.+-..|..|...... .+.+.-+..|.|-+.
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~~----~~pV~vyTFGsPRVG 372 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVPA----APPVAVFSFGGPRVG 372 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCCC----CCceEEEEcCCCCcc
Confidence 45677777788888877642 23799999999999999988888664321 123445555555443
No 159
>PLN02761 lipase class 3 family protein
Probab=60.68 E-value=22 Score=37.67 Aligned_cols=72 Identities=14% Similarity=0.096 Sum_probs=48.6
Q ss_pred cHHHHHHHHHHHHHHHHhCCCC---CCCceEEEecccCccchHHHHHHHHHHhccC---CCCeeeeeeeEeeccccCc
Q 012068 154 DNRTAQDALVFLIRWMSRFPQY---KYREFYIAGESYAGHYVPQLAKKIIDYNSAY---SRPIINLKGFIVGNAVTDN 225 (471)
Q Consensus 154 ~~~~a~d~~~fL~~F~~~fp~~---~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~---~~~~inLkGi~IGNg~idp 225 (471)
...+.+++...|+...+.+|.. ....++|+|||.||-.+-..|..|...+-.. ....+++.-+..|.|-+..
T Consensus 267 k~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN 344 (527)
T PLN02761 267 SFSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGN 344 (527)
T ss_pred chhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCC
Confidence 3456788888899988888532 1236999999999999998888887542110 1224456666666665443
No 160
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=60.63 E-value=5.4 Score=37.19 Aligned_cols=48 Identities=21% Similarity=0.261 Sum_probs=29.0
Q ss_pred CceEEEEecCCCcccCchhH-HHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCcccc
Q 012068 376 GLKIWVFSGDTDSVVPVTAT-RFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEV 441 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~-~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmv 441 (471)
.-+||+.+|..|.+-|..-. +..+++|+-.+.. .+++.+...+|||+.
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~------------------~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLKAAGFP------------------HNVEHLSYPGAGHLI 163 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----------------------EEEEETTB-S--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCC------------------CcceEEEcCCCCcee
Confidence 47999999999999887764 4555666533322 156788899999996
No 161
>PRK14566 triosephosphate isomerase; Provisional
Probab=58.09 E-value=23 Score=34.14 Aligned_cols=61 Identities=20% Similarity=0.351 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCcc
Q 012068 155 NRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNY 226 (471)
Q Consensus 155 ~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~ 226 (471)
.+.|++++.||++++...-+-....+=|. |||---|.=+..|.... ++.|+.||..-+++.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP--------DVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEechHhcCHH
Confidence 35689999999999865411111222222 99999999999998763 499999999988874
No 162
>PRK14567 triosephosphate isomerase; Provisional
Probab=57.63 E-value=26 Score=33.60 Aligned_cols=61 Identities=18% Similarity=0.304 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCcc
Q 012068 155 NRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNY 226 (471)
Q Consensus 155 ~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~ 226 (471)
.+.+++++.++++++..+-+-....+=|. |||---|.=+..|.+.. ++.|+.||.+.+++.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~--------diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP--------DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC--------CCCEEEeehhhhcHH
Confidence 35688899999999876421111222222 89999999999998763 489999999998874
No 163
>PLN00413 triacylglycerol lipase
Probab=57.49 E-value=12 Score=39.09 Aligned_cols=39 Identities=21% Similarity=0.314 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHH
Q 012068 160 DALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIID 201 (471)
Q Consensus 160 d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 201 (471)
++.+.|++.++.+|+ .+++|+|||.||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~---~kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPT---SKFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCC---CeEEEEecCHHHHHHHHHHHHHHh
Confidence 566778888888874 379999999999998888877654
No 164
>COG4425 Predicted membrane protein [Function unknown]
Probab=57.21 E-value=25 Score=36.32 Aligned_cols=37 Identities=16% Similarity=0.345 Sum_probs=31.6
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCcc
Q 012068 154 DNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGH 190 (471)
Q Consensus 154 ~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~ 190 (471)
-.++|+.+.+++-.+...-|+=..-++|+.|||-|..
T Consensus 373 g~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 373 GADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred chhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 3468999999999999999987666799999999865
No 165
>PRK07868 acyl-CoA synthetase; Validated
Probab=55.71 E-value=23 Score=41.15 Aligned_cols=61 Identities=11% Similarity=0.073 Sum_probs=46.6
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEE-EEEcCCcccccc---CChHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTF-ATVRGAGHEVPL---FQPRRALI 451 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf-~~V~~AGHmvP~---dqP~~a~~ 451 (471)
..++|+..|..|.++|...++.+.+.+. +..+ ..+.++|||.++ .-|+....
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i~------------------------~a~~~~~~~~~GH~g~~~g~~a~~~~wp 352 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAAP------------------------NAEVYESLIRAGHFGLVVGSRAAQQTWP 352 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------CCeEEEEeCCCCCEeeeechhhhhhhCh
Confidence 4899999999999999999998877653 1223 466899999655 44666668
Q ss_pred HHHHHHcCC
Q 012068 452 LFRSFLAGK 460 (471)
Q Consensus 452 mi~~fl~~~ 460 (471)
.+.+||...
T Consensus 353 ~i~~wl~~~ 361 (994)
T PRK07868 353 TVADWVKWL 361 (994)
T ss_pred HHHHHHHHh
Confidence 888999843
No 166
>PLN02310 triacylglycerol lipase
Probab=55.34 E-value=27 Score=35.90 Aligned_cols=64 Identities=11% Similarity=0.087 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHhCCCC-CCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccC
Q 012068 156 RTAQDALVFLIRWMSRFPQY-KYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTD 224 (471)
Q Consensus 156 ~~a~d~~~fL~~F~~~fp~~-~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~id 224 (471)
.+.+++.+.++...+.+++- ....+.|+|||.||-.+--.|..|.... +.+++.-+..|.|-+.
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~-----~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI-----PDLFVSVISFGAPRVG 250 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC-----cCcceeEEEecCCCcc
Confidence 45566777777777766532 2347999999999999988887775432 2234555566665543
No 167
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=54.72 E-value=43 Score=31.57 Aligned_cols=62 Identities=10% Similarity=0.064 Sum_probs=46.6
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 153 GDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 153 ~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
+.++.++.+.+.|..+.. ..+++.|+|.|-|+.-+-..+.++.+.... ..=+++-|.+||+-
T Consensus 28 Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~---~~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 28 SVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDP---PPDDLSFVLIGNPR 89 (225)
T ss_pred HHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCC---CcCceEEEEecCCC
Confidence 556677778888877665 467999999999999888888888774221 11468899999984
No 168
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=54.56 E-value=33 Score=32.16 Aligned_cols=58 Identities=21% Similarity=0.237 Sum_probs=42.0
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChH--HHHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPR--RALILF 453 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~--~a~~mi 453 (471)
.++-|-+.|+.|.+++..-.+...+.-. +- .+....+||+||.-.|. ...+.|
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~------------------------~a-~vl~HpggH~VP~~~~~~~~i~~fi 217 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFK------------------------DA-TVLEHPGGHIVPNKAKYKEKIADFI 217 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcC------------------------CC-eEEecCCCccCCCchHHHHHHHHHH
Confidence 4788999999999999998777776632 11 47788999999987753 333445
Q ss_pred HHHHc
Q 012068 454 RSFLA 458 (471)
Q Consensus 454 ~~fl~ 458 (471)
+.+++
T Consensus 218 ~~~~~ 222 (230)
T KOG2551|consen 218 QSFLQ 222 (230)
T ss_pred HHHHH
Confidence 54443
No 169
>PLN02934 triacylglycerol lipase
Probab=53.72 E-value=20 Score=37.86 Aligned_cols=41 Identities=12% Similarity=0.139 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHH
Q 012068 159 QDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDY 202 (471)
Q Consensus 159 ~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 202 (471)
..+...|+++++.+|.+ +++++|||-||-.+-..|..+..+
T Consensus 305 ~~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~l~ 345 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLVLQ 345 (515)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHHHh
Confidence 34667788888888854 799999999999988888776543
No 170
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=53.42 E-value=28 Score=33.04 Aligned_cols=61 Identities=23% Similarity=0.253 Sum_probs=46.5
Q ss_pred ceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChH---HHHHHH
Q 012068 377 LKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPR---RALILF 453 (471)
Q Consensus 377 irVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~---~a~~mi 453 (471)
.++|+.+|..|.++|....+.......=. ......+.+++|....+.+. .++.-+
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~----------------------~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 290 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER----------------------PKKLLFVPGGGHIDLYDNPPAVEQALDKL 290 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC----------------------CceEEEecCCccccccCccHHHHHHHHHH
Confidence 79999999999999998888877664311 33567888999999986655 566777
Q ss_pred HHHHcC
Q 012068 454 RSFLAG 459 (471)
Q Consensus 454 ~~fl~~ 459 (471)
.+|+..
T Consensus 291 ~~f~~~ 296 (299)
T COG1073 291 AEFLER 296 (299)
T ss_pred HHHHHH
Confidence 777654
No 171
>PLN02162 triacylglycerol lipase
Probab=53.13 E-value=17 Score=37.89 Aligned_cols=41 Identities=12% Similarity=0.130 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHH
Q 012068 159 QDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDY 202 (471)
Q Consensus 159 ~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 202 (471)
..+.+.|+..+.++|. .+++++|||.||-.+--.|..+...
T Consensus 262 ~~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~~~ 302 (475)
T PLN02162 262 YTIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILAIH 302 (475)
T ss_pred HHHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHHHc
Confidence 3455667777777774 4799999999999888777766543
No 172
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=52.14 E-value=19 Score=33.63 Aligned_cols=50 Identities=12% Similarity=0.127 Sum_probs=38.2
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHh
Q 012068 153 GDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYN 203 (471)
Q Consensus 153 ~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n 203 (471)
+.+..++.+.+.|.+..+..+.- .+++.+.|+|.||.++-.....+.+..
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~ 103 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKP 103 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhcc
Confidence 45567888888888887766543 468999999999999987777666653
No 173
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=51.71 E-value=1.1e+02 Score=30.49 Aligned_cols=132 Identities=23% Similarity=0.288 Sum_probs=72.8
Q ss_pred eEEecCCCCceEEEEEEEecCCCCCCCeEEEECCCCChhhhhh-hhhhhcCCeEEcCCCCccccCCCCCccCCceeEEec
Q 012068 56 YVTVNENHGRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAY-GASEEIGPFRINRNGSSLYLNKYSWSREANILFLES 134 (471)
Q Consensus 56 yl~v~~~~~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~-g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDq 134 (471)
-|...+ .+--.+.|.-. ......|++|-++|==|.|.-.| -.++| .+... -..++-.+
T Consensus 53 ~v~~pd-g~~~~ldw~~~--p~~~~~P~vVl~HGL~G~s~s~y~r~L~~-----------~~~~r------g~~~Vv~~- 111 (345)
T COG0429 53 RLETPD-GGFIDLDWSED--PRAAKKPLVVLFHGLEGSSNSPYARGLMR-----------ALSRR------GWLVVVFH- 111 (345)
T ss_pred EEEcCC-CCEEEEeeccC--ccccCCceEEEEeccCCCCcCHHHHHHHH-----------HHHhc------CCeEEEEe-
Confidence 444433 23456677431 12345699999999766664211 11111 12211 13455666
Q ss_pred CCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeee
Q 012068 135 PAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLK 214 (471)
Q Consensus 135 PvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLk 214 (471)
-.|.|.+-.....-|. .+. .+|+..||..-.+++| .+|+|.+|-|.||. .+|..+-++-+ ......
T Consensus 112 ~Rgcs~~~n~~p~~yh-~G~---t~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg~----d~~~~a 177 (345)
T COG0429 112 FRGCSGEANTSPRLYH-SGE---TEDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEGD----DLPLDA 177 (345)
T ss_pred cccccCCcccCcceec-ccc---hhHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhcc----Ccccce
Confidence 5788877544433332 122 2556665555445666 67999999999995 35666666532 123356
Q ss_pred eeEeeccc
Q 012068 215 GFIVGNAV 222 (471)
Q Consensus 215 Gi~IGNg~ 222 (471)
++++-+|+
T Consensus 178 a~~vs~P~ 185 (345)
T COG0429 178 AVAVSAPF 185 (345)
T ss_pred eeeeeCHH
Confidence 66666664
No 174
>PLN02847 triacylglycerol lipase
Probab=50.41 E-value=27 Score=37.65 Aligned_cols=65 Identities=15% Similarity=0.185 Sum_probs=39.7
Q ss_pred CcHHHHHHHHH----HHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeec-cccCc
Q 012068 153 GDNRTAQDALV----FLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGN-AVTDN 225 (471)
Q Consensus 153 ~~~~~a~d~~~----fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGN-g~idp 225 (471)
+.-.+|..+.+ .|++-+..+|.| ++.|+|||.||--+..++..+.++ . ...++..+..|. |++++
T Consensus 225 Gml~AArwI~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~-~----~fssi~CyAFgPp~cvS~ 294 (633)
T PLN02847 225 GMVAAARWIAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQ-K----EFSSTTCVTFAPAACMTW 294 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcC-C----CCCCceEEEecCchhcCH
Confidence 44455555544 444555567765 799999999999887776655432 2 123455666664 34444
No 175
>COG0627 Predicted esterase [General function prediction only]
Probab=49.93 E-value=90 Score=31.07 Aligned_cols=90 Identities=23% Similarity=0.190 Sum_probs=53.9
Q ss_pred CccCCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHH-----HHHHHhCCCCCC-CceEEEecccCccchHHHH
Q 012068 123 WSREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFL-----IRWMSRFPQYKY-REFYIAGESYAGHYVPQLA 196 (471)
Q Consensus 123 W~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL-----~~F~~~fp~~~~-~~~yi~GESYgG~yvP~lA 196 (471)
+...-++-=|+ |+|.|.|+-.+-..-. .... .-+.+.|| ..+.+.||--.+ ..-.|+|+|.||+=+-.+|
T Consensus 95 ~~~~~~~~vv~-p~G~~~sfY~d~~~~~-~~~~--~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA 170 (316)
T COG0627 95 RGAGVNISVVM-PLGGGASFYSDWTQPP-WASG--PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLA 170 (316)
T ss_pred ccCCCCccccc-cCCCccceecccccCc-cccC--ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhh
Confidence 44555566666 6999988744322100 0000 12222222 245556663321 2678999999999888888
Q ss_pred HHHHHHhccCCCCeeeeeeeEeeccccCcc
Q 012068 197 KKIIDYNSAYSRPIINLKGFIVGNAVTDNY 226 (471)
Q Consensus 197 ~~i~~~n~~~~~~~inLkGi~IGNg~idp~ 226 (471)
.+-.++ ++.++=-+|+++|.
T Consensus 171 ~~~pd~----------f~~~sS~Sg~~~~s 190 (316)
T COG0627 171 LKHPDR----------FKSASSFSGILSPS 190 (316)
T ss_pred hhCcch----------hceecccccccccc
Confidence 766544 77777778888775
No 176
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=49.91 E-value=19 Score=36.76 Aligned_cols=35 Identities=40% Similarity=0.736 Sum_probs=25.9
Q ss_pred eEEeeEEecCCCCceEEEEEEEecCCCCCCCeE-EEECC
Q 012068 52 QFSGYVTVNENHGRALFYWLTEAASSALKKPLV-LWLNG 89 (471)
Q Consensus 52 ~~sGyl~v~~~~~~~lFy~~~es~~~~~~~Pli-lWlnG 89 (471)
...|||+++. .+++.+ ..|++....+.||| +||.|
T Consensus 200 ~k~GfLTmDq--tRkl~l-LlesDpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 200 YKSGFLTMDQ--TRKLLL-LLESDPKASSLPLVGIWLSG 235 (410)
T ss_pred cccceeeEcc--ccceEE-EeccCCCccCCCceeeEecC
Confidence 4799999975 567777 66765445666876 89996
No 177
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=49.64 E-value=15 Score=33.88 Aligned_cols=106 Identities=23% Similarity=0.185 Sum_probs=64.6
Q ss_pred CceEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCc
Q 012068 64 GRALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYT 143 (471)
Q Consensus 64 ~~~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~ 143 (471)
+.+|.|.-+-+ -+--||-+-|--||+-.+|+.=.++ .++ -.+ ..+|=|| |.|-|-|..
T Consensus 30 g~ql~y~~~G~-----G~~~iLlipGalGs~~tDf~pql~~-------------l~k--~l~-~TivawD-PpGYG~SrP 87 (277)
T KOG2984|consen 30 GTQLGYCKYGH-----GPNYILLIPGALGSYKTDFPPQLLS-------------LFK--PLQ-VTIVAWD-PPGYGTSRP 87 (277)
T ss_pred CceeeeeecCC-----CCceeEecccccccccccCCHHHHh-------------cCC--CCc-eEEEEEC-CCCCCCCCC
Confidence 56788763322 2346788889889887664222211 111 112 7899999 557777764
Q ss_pred cCCC---CCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHH
Q 012068 144 NTSS---NLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDY 202 (471)
Q Consensus 144 ~~~~---~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 202 (471)
.+.. ++. ..|.+.|-|+.++| +-.+|-|.|-|=||+-+-..|.+-.+.
T Consensus 88 P~Rkf~~~ff-~~Da~~avdLM~aL----------k~~~fsvlGWSdGgiTalivAak~~e~ 138 (277)
T KOG2984|consen 88 PERKFEVQFF-MKDAEYAVDLMEAL----------KLEPFSVLGWSDGGITALIVAAKGKEK 138 (277)
T ss_pred CcccchHHHH-HHhHHHHHHHHHHh----------CCCCeeEeeecCCCeEEEEeeccChhh
Confidence 3321 111 13445566666654 234899999999999887777766554
No 178
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=48.68 E-value=21 Score=31.98 Aligned_cols=49 Identities=4% Similarity=-0.029 Sum_probs=30.7
Q ss_pred HHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 164 FLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 164 fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
+++.+-+.-... ..+.+|.|||.|+.-+-..+. .+ ..-+++|+++..|+
T Consensus 42 W~~~l~~~i~~~-~~~~ilVaHSLGc~~~l~~l~---~~------~~~~v~g~lLVAp~ 90 (171)
T PF06821_consen 42 WVQALDQAIDAI-DEPTILVAHSLGCLTALRWLA---EQ------SQKKVAGALLVAPF 90 (171)
T ss_dssp HHHHHHHCCHC--TTTEEEEEETHHHHHHHHHHH---HT------CCSSEEEEEEES--
T ss_pred HHHHHHHHHhhc-CCCeEEEEeCHHHHHHHHHHh---hc------ccccccEEEEEcCC
Confidence 333333333333 458999999999987666664 22 13469999999997
No 179
>PF03283 PAE: Pectinacetylesterase
Probab=48.24 E-value=1.1e+02 Score=31.15 Aligned_cols=128 Identities=18% Similarity=0.188 Sum_probs=64.9
Q ss_pred EEEEEEEecCCCCCCCeEEEECCCCChhhhhhhh----hhhcCCeE-----EcCCC---CccccCCCCCccCCceeEEec
Q 012068 67 LFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGA----SEEIGPFR-----INRNG---SSLYLNKYSWSREANILFLES 134 (471)
Q Consensus 67 lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~----f~e~GP~~-----~~~~~---~~~~~N~~sW~~~anllfiDq 134 (471)
-.|++-+. .....+-+||.|+||=.|.+.. -- ..+.|-.. +..++ ..-..||.=+ ..|+|||=-
T Consensus 37 ~~yy~~~g-~g~~s~~~li~leGGG~C~~~~-tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~--~wN~V~vpY 112 (361)
T PF03283_consen 37 PGYYFRPG-SGSGSNKWLIFLEGGGWCWDAE-TCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFY--NWNHVFVPY 112 (361)
T ss_pred CcEEEccC-CCCCCceEEEEeccchhcCChh-HHhhhccCccccccchhhhccccccccCCcccCCccc--cccEEEEEe
Confidence 33444443 2245678999999997776642 22 22333222 11111 0123455222 267888843
Q ss_pred CCCccccCccCCC--CCCCCCcHHHHHHHH-HHHHHHHHh-CCCCCCCceEEEecccCccchHHHHHHHHHH
Q 012068 135 PAGVGFSYTNTSS--NLKDSGDNRTAQDAL-VFLIRWMSR-FPQYKYREFYIAGESYAGHYVPQLAKKIIDY 202 (471)
Q Consensus 135 PvGtGfSy~~~~~--~~~~~~~~~~a~d~~-~fL~~F~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 202 (471)
=+|-++.-+.. .....+.--....++ +.|...+.. +++ ..++.|+|.|-||.=+..-+.++.+.
T Consensus 113 --C~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~ 180 (361)
T PF03283_consen 113 --CDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDR 180 (361)
T ss_pred --cCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHH
Confidence 44444432211 110000111223333 434444444 443 34799999999999887777777765
No 180
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=48.23 E-value=10 Score=34.43 Aligned_cols=16 Identities=44% Similarity=1.024 Sum_probs=13.7
Q ss_pred CCCCeEEEECCCCChh
Q 012068 79 LKKPLVLWLNGGPGCS 94 (471)
Q Consensus 79 ~~~PlilWlnGGPG~S 94 (471)
.+.|-|||.=|||||.
T Consensus 5 ~~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSG 20 (195)
T ss_pred ccCCCEEEEEcCCCCC
Confidence 4678899999999985
No 181
>PLN03037 lipase class 3 family protein; Provisional
Probab=48.18 E-value=38 Score=35.85 Aligned_cols=46 Identities=15% Similarity=0.130 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHhCCCC-CCCceEEEecccCccchHHHHHHHHHH
Q 012068 157 TAQDALVFLIRWMSRFPQY-KYREFYIAGESYAGHYVPQLAKKIIDY 202 (471)
Q Consensus 157 ~a~d~~~fL~~F~~~fp~~-~~~~~yi~GESYgG~yvP~lA~~i~~~ 202 (471)
+-+++.+-|+...+.+++. ....++|+|||.||-.+--.|..|...
T Consensus 296 areQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~ 342 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARS 342 (525)
T ss_pred hHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHh
Confidence 4456666677777777642 234699999999999998888777664
No 182
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=47.88 E-value=33 Score=33.84 Aligned_cols=70 Identities=14% Similarity=0.106 Sum_probs=40.7
Q ss_pred CcHHHHHHHHHHHHHHHHhCCC-CCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCccc
Q 012068 153 GDNRTAQDALVFLIRWMSRFPQ-YKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNYY 227 (471)
Q Consensus 153 ~~~~~a~d~~~fL~~F~~~fp~-~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~~ 227 (471)
+.++.++|+-++++-+-..... +...++.|+|||=|..=+-.... ..+.. .....++|+|+..|+-|.+.
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~---~~~~~--~~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLS---SPNPS--PSRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHH---H-TT-----CCCEEEEEEEEE---TTS
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHh---ccCcc--ccccceEEEEEeCCCCChhH
Confidence 5677888888866555444322 34568999999999886554443 33310 11456999999999988764
No 183
>PLN03082 Iron-sulfur cluster assembly; Provisional
Probab=46.97 E-value=18 Score=32.25 Aligned_cols=63 Identities=22% Similarity=0.363 Sum_probs=43.0
Q ss_pred CCCCeEEEECCCCChhhhhhhhhhhcCC----eEEcCCCCccccCC--CCCccCCceeEEecCCCccccC
Q 012068 79 LKKPLVLWLNGGPGCSSVAYGASEEIGP----FRINRNGSSLYLNK--YSWSREANILFLESPAGVGFSY 142 (471)
Q Consensus 79 ~~~PlilWlnGGPG~SS~~~g~f~e~GP----~~~~~~~~~~~~N~--~sW~~~anllfiDqPvGtGfSy 142 (471)
+..+|=|-+.|| |||++.|++=.+.-| ..+..++-++.-.+ ..+.+-+.|=|+|...|.||-.
T Consensus 76 ~~~~LRl~V~~g-GCSG~~Y~~~ld~~~~~~D~v~e~~Gv~vvVD~~s~~~L~Gs~IDYve~l~~~gF~f 144 (163)
T PLN03082 76 EDKMLRLSVETG-GCSGFQYVFELDDKTNSDDRVFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVV 144 (163)
T ss_pred CCceEEEEEecC-CCCCceeeeEEccCCCCCCEEEecCCeEEEECHHHHHHhCCCEEEeecCCCCCeeEE
Confidence 346799999999 999976655443322 34444444444333 4456678888999999999987
No 184
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=46.72 E-value=16 Score=24.85 Aligned_cols=33 Identities=12% Similarity=0.096 Sum_probs=25.3
Q ss_pred ccccCcccccccchhhhhccCCCChHHHHHHHh
Q 012068 220 NAVTDNYYDSIGTVTFWWTHSMISDKTYRSIIN 252 (471)
Q Consensus 220 Ng~idp~~q~~~~~~~a~~~gli~~~~~~~~~~ 252 (471)
.|.+||.....-..+-|+..|+|+.+....+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 377889876666677899999999998877654
No 185
>COG1647 Esterase/lipase [General function prediction only]
Probab=46.58 E-value=41 Score=31.64 Aligned_cols=60 Identities=23% Similarity=0.339 Sum_probs=48.2
Q ss_pred ceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCCh-HHHHHHHHH
Q 012068 377 LKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQP-RRALILFRS 455 (471)
Q Consensus 377 irVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP-~~a~~mi~~ 455 (471)
.+++|..|..|-++|..+++...+.+.-..++ ..+..++||-.-.|.- +...+-+-+
T Consensus 182 ~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~Ke----------------------L~~~e~SgHVIt~D~Erd~v~e~V~~ 239 (243)
T COG1647 182 SPTLVVQGRQDEMVPAESANFIYDHVESDDKE----------------------LKWLEGSGHVITLDKERDQVEEDVIT 239 (243)
T ss_pred cchhheecccCCCCCHHHHHHHHHhccCCcce----------------------eEEEccCCceeecchhHHHHHHHHHH
Confidence 78999999999999999999999998644443 4566799999998875 444577777
Q ss_pred HHc
Q 012068 456 FLA 458 (471)
Q Consensus 456 fl~ 458 (471)
|+.
T Consensus 240 FL~ 242 (243)
T COG1647 240 FLE 242 (243)
T ss_pred Hhh
Confidence 875
No 186
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=46.32 E-value=45 Score=31.64 Aligned_cols=65 Identities=20% Similarity=0.256 Sum_probs=39.5
Q ss_pred CCceeEEecCCCccccCccCCCCCCCCCc-HHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHH
Q 012068 126 EANILFLESPAGVGFSYTNTSSNLKDSGD-NRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQL 195 (471)
Q Consensus 126 ~anllfiDqPvGtGfSy~~~~~~~~~~~~-~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~l 195 (471)
-+.||-.|- .|.|-|......... +.- +=+-.|+-..|..--++-| ..|.|..||||||+-.=-+
T Consensus 57 Gf~Vlt~dy-RG~g~S~p~~~~~~~-~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~ 122 (281)
T COG4757 57 GFEVLTFDY-RGIGQSRPASLSGSQ-WRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLL 122 (281)
T ss_pred CceEEEEec-ccccCCCccccccCc-cchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeeccc
Confidence 457888884 899998865544221 121 1234455554443333344 5699999999999954333
No 187
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=45.01 E-value=13 Score=24.09 Aligned_cols=13 Identities=31% Similarity=0.884 Sum_probs=6.7
Q ss_pred CCeEEEECCCCCh
Q 012068 81 KPLVLWLNGGPGC 93 (471)
Q Consensus 81 ~PlilWlnGGPG~ 93 (471)
.--+||++|-||-
T Consensus 24 ~gRTiWFqGdPGp 36 (39)
T PF09292_consen 24 NGRTIWFQGDPGP 36 (39)
T ss_dssp TS-EEEESS---T
T ss_pred CCCEEEeeCCCCC
Confidence 3457999999983
No 188
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=43.80 E-value=31 Score=30.95 Aligned_cols=43 Identities=21% Similarity=0.266 Sum_probs=34.7
Q ss_pred ceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccC
Q 012068 377 LKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLF 444 (471)
Q Consensus 377 irVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~d 444 (471)
++.+++..+.|..||+.-++.+.++++ ..++.+.++||+-..+
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l~-------------------------a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRLG-------------------------AELIILGGGGHFNAAS 157 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHHT--------------------------EEEEETS-TTSSGGG
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHcC-------------------------CCeEECCCCCCccccc
Confidence 666999999999999999999999874 2488999999997653
No 189
>TIGR01911 HesB_rel_seleno HesB-like selenoprotein. This model represents a family of small proteins related to HesB and its close homologs, which are likely to be invovlved in iron-sulfur cluster assembly (See TIGR00049 and pfam01521). Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain. A variable Cys/Ser/Gly-rich C-terminal region is not included in the seed alignment and model.
Probab=43.38 E-value=23 Score=28.31 Aligned_cols=19 Identities=16% Similarity=0.434 Sum_probs=14.9
Q ss_pred eEEEECCCCChhhhhhhhhh
Q 012068 83 LVLWLNGGPGCSSVAYGASE 102 (471)
Q Consensus 83 lilWlnGGPG~SS~~~g~f~ 102 (471)
|=|.+.|| |||++.|++=.
T Consensus 28 LRi~v~~g-GCsG~~Y~~~l 46 (92)
T TIGR01911 28 IRIHFAGM-GCMGPMFNLIA 46 (92)
T ss_pred EEEEEeCC-CccCcccceEe
Confidence 88889999 99997655443
No 190
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=43.07 E-value=71 Score=34.46 Aligned_cols=53 Identities=11% Similarity=0.246 Sum_probs=42.1
Q ss_pred HHHHhcCceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCC
Q 012068 370 KQLIAAGLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQ 445 (471)
Q Consensus 370 ~~LL~~girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dq 445 (471)
+.||+-+.+||+..|..|..|.-...|..-++|.-... .++|.+|+|.+-.-+
T Consensus 298 E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~e-----------------------lhVI~~adhsmaipk 350 (784)
T KOG3253|consen 298 EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVE-----------------------LHVIGGADHSMAIPK 350 (784)
T ss_pred hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccce-----------------------EEEecCCCccccCCc
Confidence 46777789999999999999999999998888753322 578888998764433
No 191
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=42.69 E-value=44 Score=31.42 Aligned_cols=79 Identities=18% Similarity=0.170 Sum_probs=48.4
Q ss_pred HHHHHhcCceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEc-CCccccccCCh-
Q 012068 369 YKQLIAAGLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVR-GAGHEVPLFQP- 446 (471)
Q Consensus 369 l~~LL~~girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~-~AGHmvP~dqP- 446 (471)
.+.+-+-..+||+..|+.|-+||.....+|-+.++=.- .++-+++.|++.+.-.+. .+==.-|.|++
T Consensus 157 ~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~-----------~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~ 225 (242)
T KOG3043|consen 157 SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENP-----------AVGSQVKTFSGVGHGFVARRANISSPEDKKA 225 (242)
T ss_pred hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCc-----------ccceeEEEcCCccchhhhhccCCCChhHHHH
Confidence 33343435899999999999999999999988875211 223345544443332221 22222366665
Q ss_pred -HHHHHHHHHHHc
Q 012068 447 -RRALILFRSFLA 458 (471)
Q Consensus 447 -~~a~~mi~~fl~ 458 (471)
+++++.+..|++
T Consensus 226 ~eea~~~~~~Wf~ 238 (242)
T KOG3043|consen 226 AEEAYQRFISWFK 238 (242)
T ss_pred HHHHHHHHHHHHH
Confidence 566777777764
No 192
>PLN02429 triosephosphate isomerase
Probab=42.63 E-value=55 Score=32.47 Aligned_cols=60 Identities=20% Similarity=0.321 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHh-CCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCcc
Q 012068 156 RTAQDALVFLIRWMSR-FPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNY 226 (471)
Q Consensus 156 ~~a~d~~~fL~~F~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~ 226 (471)
+.++.+++++++|+.. +.+-....+-|. |||---|.-+..+..+ .++.|+.||.+.+++.
T Consensus 239 e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~--------~diDG~LVGgASL~~~ 299 (315)
T PLN02429 239 QQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE--------EDIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC--------CCCCEEEeecceecHH
Confidence 5688899999999864 322212222232 8999999999988875 3499999999998764
No 193
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=42.55 E-value=41 Score=30.43 Aligned_cols=65 Identities=18% Similarity=0.101 Sum_probs=39.1
Q ss_pred cCCceeEEecCCC--ccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhC-CCCCCCceEEEecccCccchHHHHHH
Q 012068 125 REANILFLESPAG--VGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRF-PQYKYREFYIAGESYAGHYVPQLAKK 198 (471)
Q Consensus 125 ~~anllfiDqPvG--tGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~f-p~~~~~~~yi~GESYgG~yvP~lA~~ 198 (471)
+.|-|.|++-... ...+-.. .. --+..|.++..|+..+=..+ | ...+-+.|||||+.-+-.-+..
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~~--~~----~A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAAS--PG----YARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCccccccC--ch----HHHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhhh
Confidence 6777888754333 2222111 11 12456777777777765555 2 3368999999999876555544
No 194
>PRK07868 acyl-CoA synthetase; Validated
Probab=42.27 E-value=43 Score=38.98 Aligned_cols=39 Identities=18% Similarity=0.189 Sum_probs=26.2
Q ss_pred CCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccC
Q 012068 177 YREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTD 224 (471)
Q Consensus 177 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~id 224 (471)
..+++|.|+|.||..+-.+|..-.. + .++++++.+.-+|
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa~~~~--~-------~v~~lvl~~~~~d 178 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAAYRRS--K-------DIASIVTFGSPVD 178 (994)
T ss_pred CCceEEEEEChhHHHHHHHHHhcCC--C-------ccceEEEEecccc
Confidence 3589999999999998777753111 1 2677766555444
No 195
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=42.12 E-value=19 Score=28.21 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHH
Q 012068 159 QDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIID 201 (471)
Q Consensus 159 ~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 201 (471)
-|++++.+.|+.++ |..+.|.+-|+||+ +.+-|.+
T Consensus 7 vdIYDAvRaflLr~--Y~~KrfIV~g~S~~------IlhNIyr 41 (100)
T PF07389_consen 7 VDIYDAVRAFLLRH--YYDKRFIVYGRSNA------ILHNIYR 41 (100)
T ss_pred hhHHHHHHHHHHHH--HccceEEEecchHH------HHHHHHH
Confidence 46788899998876 66779999999993 4455554
No 196
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=41.95 E-value=59 Score=32.62 Aligned_cols=54 Identities=17% Similarity=0.266 Sum_probs=38.9
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeecc
Q 012068 153 GDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNA 221 (471)
Q Consensus 153 ~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg 221 (471)
++..+++.+.+|-.+-+ .|+..++.|.|-|-||.-+...|.-. .++|++++-.-
T Consensus 290 n~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~Y-----------PdVkavvLDAt 343 (517)
T KOG1553|consen 290 NTLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASNY-----------PDVKAVVLDAT 343 (517)
T ss_pred cchHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhcC-----------CCceEEEeecc
Confidence 66667776666654433 35577999999999999888888643 45888877543
No 197
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=41.56 E-value=24 Score=36.21 Aligned_cols=25 Identities=8% Similarity=0.069 Sum_probs=21.0
Q ss_pred CCceEEEecccCccchHHHHHHHHH
Q 012068 177 YREFYIAGESYAGHYVPQLAKKIID 201 (471)
Q Consensus 177 ~~~~yi~GESYgG~yvP~lA~~i~~ 201 (471)
++++.|.|||+||.++-.+.....+
T Consensus 118 ~~kv~li~HSmGgl~~~~fl~~~~~ 142 (389)
T PF02450_consen 118 GKKVVLIAHSMGGLVARYFLQWMPQ 142 (389)
T ss_pred CCcEEEEEeCCCchHHHHHHHhccc
Confidence 6799999999999998877776643
No 198
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=40.95 E-value=48 Score=31.97 Aligned_cols=63 Identities=17% Similarity=0.298 Sum_probs=37.8
Q ss_pred cHHHHHHHHHHHHHHHHh-CC-----CCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeecccc
Q 012068 154 DNRTAQDALVFLIRWMSR-FP-----QYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVT 223 (471)
Q Consensus 154 ~~~~a~d~~~fL~~F~~~-fp-----~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~i 223 (471)
+.+.+..+.++|.+=++. .| ++ .++.|+|||=||+-+-.+|....+ ....+++++++..+|+=
T Consensus 63 ~~~~~~~vi~Wl~~~L~~~l~~~v~~D~--s~l~l~GHSrGGk~Af~~al~~~~-----~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 63 EVASAAEVIDWLAKGLESKLPLGVKPDF--SKLALAGHSRGGKVAFAMALGNAS-----SSLDLRFSALILLDPVD 131 (259)
T ss_pred hHHHHHHHHHHHHhcchhhccccccccc--cceEEeeeCCCCHHHHHHHhhhcc-----cccccceeEEEEecccc
Confidence 445566666665542211 22 22 269999999999954444433311 12356799999988864
No 199
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=40.93 E-value=51 Score=33.11 Aligned_cols=41 Identities=17% Similarity=0.287 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHh
Q 012068 160 DALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYN 203 (471)
Q Consensus 160 d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n 203 (471)
.+.+-++.....+| +..++++|||-||-++.-.|..|....
T Consensus 156 ~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~ 196 (336)
T KOG4569|consen 156 GLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNG 196 (336)
T ss_pred HHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcC
Confidence 33344555556677 458999999999999999999998764
No 200
>PLN02442 S-formylglutathione hydrolase
Probab=40.27 E-value=52 Score=31.96 Aligned_cols=48 Identities=13% Similarity=0.028 Sum_probs=35.2
Q ss_pred cCceEEEEecCCCcccCch-hHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccc
Q 012068 375 AGLKIWVFSGDTDSVVPVT-ATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVP 442 (471)
Q Consensus 375 ~girVLiy~Gd~D~i~~~~-g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP 442 (471)
.+.+|++.+|+.|..|+.. .++.+.+.++=.+ .+.++..+.+++|-..
T Consensus 216 ~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g--------------------~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 216 VSATILIDQGEADKFLKEQLLPENFEEACKEAG--------------------APVTLRLQPGYDHSYF 264 (283)
T ss_pred cCCCEEEEECCCCccccccccHHHHHHHHHHcC--------------------CCeEEEEeCCCCccHH
Confidence 3589999999999999974 4666666653111 1357888999999766
No 201
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=38.32 E-value=45 Score=37.01 Aligned_cols=94 Identities=19% Similarity=0.258 Sum_probs=55.4
Q ss_pred EEEECCCCCh-------hhhhhhhhhhcCCeEEcCCCCccccCCCCCccCCceeEEecCCCccccCccCCCCCCCCCcHH
Q 012068 84 VLWLNGGPGC-------SSVAYGASEEIGPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSYTNTSSNLKDSGDNR 156 (471)
Q Consensus 84 ilWlnGGPG~-------SS~~~g~f~e~GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~ 156 (471)
||++-|--|+ .|.. .+-..+||++=..+ .+||++. +-.=+| ..=-|| .+......+
T Consensus 92 VLFIPGNAGSyKQvRSiAS~a-~n~y~~~~~e~t~~----~d~~~~~----DFFaVD--FnEe~t------Am~G~~l~d 154 (973)
T KOG3724|consen 92 VLFIPGNAGSYKQVRSIASVA-QNAYQGGPFEKTED----RDNPFSF----DFFAVD--FNEEFT------AMHGHILLD 154 (973)
T ss_pred EEEecCCCCchHHHHHHHHHH-hhhhcCCchhhhhc----ccCcccc----ceEEEc--ccchhh------hhccHhHHH
Confidence 6788888776 3442 56667899983332 2477766 222233 111121 111124556
Q ss_pred HHHHHHHHHHHHHH---hCCCCC---CCceEEEecccCccchHH
Q 012068 157 TAQDALVFLIRWMS---RFPQYK---YREFYIAGESYAGHYVPQ 194 (471)
Q Consensus 157 ~a~d~~~fL~~F~~---~fp~~~---~~~~yi~GESYgG~yvP~ 194 (471)
.++.+.++++.-+. .-+||. ...+.|.||||||.-+-.
T Consensus 155 QtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra 198 (973)
T KOG3724|consen 155 QTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARA 198 (973)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHH
Confidence 78888777765554 345665 445999999999985443
No 202
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=36.76 E-value=42 Score=29.95 Aligned_cols=28 Identities=18% Similarity=0.271 Sum_probs=23.2
Q ss_pred CCCCCceEEEecccCccchHHHHHHHHH
Q 012068 174 QYKYREFYIAGESYAGHYVPQLAKKIID 201 (471)
Q Consensus 174 ~~~~~~~yi~GESYgG~yvP~lA~~i~~ 201 (471)
.+..-|+.|-|.||||+-...+|..+..
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~A 112 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQA 112 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhcC
Confidence 3455699999999999999999987754
No 203
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=35.57 E-value=32 Score=31.82 Aligned_cols=49 Identities=18% Similarity=0.251 Sum_probs=30.7
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRR 448 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~ 448 (471)
.+++|-..|..|.+++...++...+... .. ..+....+||.+|...+..
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~-----------------------~~-~~v~~h~gGH~vP~~~~~~ 209 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFD-----------------------PD-ARVIEHDGGHHVPRKKEDV 209 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHH-----------------------HH-EEEEEESSSSS----HHHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhcc-----------------------CC-cEEEEECCCCcCcCChhhc
Confidence 4899999999999999877777665531 01 3567789999999987754
No 204
>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing [].; GO: 0005525 GTP binding, 0016817 hydrolase activity, acting on acid anhydrides, 0016020 membrane; PDB: 1TPZ_A 1TQD_A 1TQ6_A 1TQ2_B 1TQ4_A.
Probab=35.32 E-value=25 Score=35.78 Aligned_cols=59 Identities=24% Similarity=0.403 Sum_probs=33.6
Q ss_pred CCCCeEEEECCCCCh--hhhhhhhhhhcCCeEEc--CCC---CccccCCCCCccCCceeEEecCCCcc
Q 012068 79 LKKPLVLWLNGGPGC--SSVAYGASEEIGPFRIN--RNG---SSLYLNKYSWSREANILFLESPAGVG 139 (471)
Q Consensus 79 ~~~PlilWlnGGPG~--SS~~~g~f~e~GP~~~~--~~~---~~~~~N~~sW~~~anllfiDqPvGtG 139 (471)
++.|+=|-+.|.+|+ ||++ -.+-++|+=.-. +.| .+....+|.=-++.||.++|-| |+|
T Consensus 32 ~~~~l~IaV~G~sGsGKSSfI-NalrGl~~~d~~aA~tGv~etT~~~~~Y~~p~~pnv~lWDlP-G~g 97 (376)
T PF05049_consen 32 DNAPLNIAVTGESGSGKSSFI-NALRGLGHEDEGAAPTGVVETTMEPTPYPHPKFPNVTLWDLP-GIG 97 (376)
T ss_dssp HH--EEEEEEESTTSSHHHHH-HHHTT--TTSTTS--SSSHSCCTS-EEEE-SS-TTEEEEEE---GG
T ss_pred hcCceEEEEECCCCCCHHHHH-HHHhCCCCCCcCcCCCCCCcCCCCCeeCCCCCCCCCeEEeCC-CCC
Confidence 467888889897765 8885 777777662110 000 1345567777888999999998 666
No 205
>PLN02561 triosephosphate isomerase
Probab=35.18 E-value=85 Score=30.18 Aligned_cols=59 Identities=22% Similarity=0.322 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHh-CCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCc
Q 012068 156 RTAQDALVFLIRWMSR-FPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDN 225 (471)
Q Consensus 156 ~~a~d~~~fL~~F~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp 225 (471)
+.++++++++++++.+ +..-....+-|. |||---|.=+..+... .++.|+.||.+.+++
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~--------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 180 AQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ--------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC--------CCCCeEEEehHhhHH
Confidence 4688889999998854 432222233222 8999999999998765 459999999999886
No 206
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=35.17 E-value=20 Score=36.66 Aligned_cols=37 Identities=19% Similarity=0.143 Sum_probs=22.5
Q ss_pred ceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCcc
Q 012068 179 EFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNY 226 (471)
Q Consensus 179 ~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~ 226 (471)
++.++||||||--+-..+. +. ..++..++.+||.-|.
T Consensus 229 ~i~~~GHSFGGATa~~~l~---~d--------~r~~~~I~LD~W~~Pl 265 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALR---QD--------TRFKAGILLDPWMFPL 265 (379)
T ss_dssp EEEEEEETHHHHHHHHHHH---H---------TT--EEEEES---TTS
T ss_pred heeeeecCchHHHHHHHHh---hc--------cCcceEEEeCCcccCC
Confidence 6999999999975543332 22 1278889999999885
No 207
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=33.82 E-value=1.1e+02 Score=29.16 Aligned_cols=59 Identities=20% Similarity=0.401 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHh-CCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCcc
Q 012068 156 RTAQDALVFLIRWMSR-FPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNY 226 (471)
Q Consensus 156 ~~a~d~~~fL~~F~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~ 226 (471)
+.+++.+.++++++.. +.+ ....+-|. |||---|.=+..+.+.. ++.|+.+|.+.+++.
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~--------~vDG~LVG~Asl~~~ 235 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP--------DIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC--------CCCEEEeehHhhCHH
Confidence 4588889999998864 332 22233333 89999998888887753 489999999998764
No 208
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=33.44 E-value=2.6e+02 Score=29.80 Aligned_cols=34 Identities=18% Similarity=0.201 Sum_probs=24.1
Q ss_pred HHHHHHHHHhCCCCCCCceEEEecccCccchHHHH
Q 012068 162 LVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLA 196 (471)
Q Consensus 162 ~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA 196 (471)
.+++++....|-. ..+++-|+|||.||..|-.+.
T Consensus 180 L~wv~~~I~~FGG-dp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 180 LRWVKDNIPSFGG-DPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHHhcCC-CCCeEEEEeechhHHHHHHHh
Confidence 4566666666642 234799999999999875544
No 209
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=33.31 E-value=48 Score=29.93 Aligned_cols=36 Identities=14% Similarity=0.098 Sum_probs=28.6
Q ss_pred CCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 177 YREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 177 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
.+|.||.+||.|+.-+...+.++..+ +.|+++..|.
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~~----------V~GalLVApp 93 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQRQ----------VAGALLVAPP 93 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhhc----------cceEEEecCC
Confidence 55899999999997777776666542 8999998874
No 210
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=33.17 E-value=59 Score=29.87 Aligned_cols=63 Identities=17% Similarity=0.231 Sum_probs=37.6
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCcccccc-----CChHHHH
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPL-----FQPRRAL 450 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~-----dqP~~a~ 450 (471)
..+|++..|..|..++....+...+.|+=.+. .+.+.++.|++|=... ++++++.
T Consensus 145 ~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~--------------------~~~~~~y~ga~HgF~~~~~~~~~~~aa~ 204 (218)
T PF01738_consen 145 KAPVLILFGENDPFFPPEEVEALEEALKAAGV--------------------DVEVHVYPGAGHGFANPSRPPYDPAAAE 204 (218)
T ss_dssp -S-EEEEEETT-TTS-HHHHHHHHHHHHCTTT--------------------TEEEEEETT--TTTTSTTSTT--HHHHH
T ss_pred CCCEeecCccCCCCCChHHHHHHHHHHHhcCC--------------------cEEEEECCCCcccccCCCCcccCHHHHH
Confidence 58999999999999999998888888742222 3457778889996432 2344444
Q ss_pred ---HHHHHHHc
Q 012068 451 ---ILFRSFLA 458 (471)
Q Consensus 451 ---~mi~~fl~ 458 (471)
+-+.+|++
T Consensus 205 ~a~~~~~~ff~ 215 (218)
T PF01738_consen 205 DAWQRTLAFFK 215 (218)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHH
Confidence 44445553
No 211
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=33.00 E-value=41 Score=36.10 Aligned_cols=82 Identities=22% Similarity=0.228 Sum_probs=58.7
Q ss_pred CceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccC
Q 012068 127 ANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAY 206 (471)
Q Consensus 127 anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~ 206 (471)
.-+|..| =.|.|-|.+.-.... + +-++|-++ +.+|+.+.|.-++ ++=..|-||+|.-.-.+|..
T Consensus 81 YavV~qD-vRG~~~SeG~~~~~~---~--~E~~Dg~D-~I~Wia~QpWsNG-~Vgm~G~SY~g~tq~~~Aa~-------- 144 (563)
T COG2936 81 YAVVNQD-VRGRGGSEGVFDPES---S--REAEDGYD-TIEWLAKQPWSNG-NVGMLGLSYLGFTQLAAAAL-------- 144 (563)
T ss_pred eEEEEec-ccccccCCcccceec---c--ccccchhH-HHHHHHhCCccCC-eeeeecccHHHHHHHHHHhc--------
Confidence 4577888 489999987654321 3 33556666 6678888887666 89999999999976665541
Q ss_pred CCCeeeeeeeEeeccccCcc
Q 012068 207 SRPIINLKGFIVGNAVTDNY 226 (471)
Q Consensus 207 ~~~~inLkGi~IGNg~idp~ 226 (471)
....||.|+.-.|.+|-.
T Consensus 145 --~pPaLkai~p~~~~~D~y 162 (563)
T COG2936 145 --QPPALKAIAPTEGLVDRY 162 (563)
T ss_pred --CCchheeecccccccccc
Confidence 234599999888888864
No 212
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=31.85 E-value=1.3e+02 Score=28.84 Aligned_cols=59 Identities=20% Similarity=0.321 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHh-CCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCcc
Q 012068 156 RTAQDALVFLIRWMSR-FPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNY 226 (471)
Q Consensus 156 ~~a~d~~~fL~~F~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~ 226 (471)
+.++++++|+++++.. +. -....+-|. |||---|.=+..+... .++.|+.||.+.+++.
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~--------~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 180 EQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ--------PDIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEeeeeechH
Confidence 5688899999998863 32 112233232 9999999999988775 3499999999998764
No 213
>PRK10115 protease 2; Provisional
Probab=31.21 E-value=80 Score=35.11 Aligned_cols=57 Identities=18% Similarity=0.008 Sum_probs=39.8
Q ss_pred Cce-EEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHH
Q 012068 376 GLK-IWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRA 449 (471)
Q Consensus 376 gir-VLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a 449 (471)
.++ +||.+|..|..|++...+.|..+|+=.+... . -+-+.+-.++||.-...+-+..
T Consensus 605 ~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~-----------~------~vl~~~~~~~GHg~~~~r~~~~ 662 (686)
T PRK10115 605 AYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDD-----------H------LLLLCTDMDSGHGGKSGRFKSY 662 (686)
T ss_pred CCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCC-----------c------eEEEEecCCCCCCCCcCHHHHH
Confidence 478 6788999999999999999999986433321 0 1122223799999766665544
No 214
>PRK11190 Fe/S biogenesis protein NfuA; Provisional
Probab=30.57 E-value=39 Score=31.01 Aligned_cols=63 Identities=16% Similarity=0.279 Sum_probs=38.7
Q ss_pred eEEEECCCCChhhhhhhhhh--hc----CCeEEcCCCCccccCC--CCCccCCceeEEecCCCccccCccCC
Q 012068 83 LVLWLNGGPGCSSVAYGASE--EI----GPFRINRNGSSLYLNK--YSWSREANILFLESPAGVGFSYTNTS 146 (471)
Q Consensus 83 lilWlnGGPG~SS~~~g~f~--e~----GP~~~~~~~~~~~~N~--~sW~~~anllfiDqPvGtGfSy~~~~ 146 (471)
|=|.+.|| |||++.|++-. +. +-..+..++-++.-.+ ..+.+-+-|=|+|...|.||.+.+++
T Consensus 25 LRI~V~~g-GCsG~~Y~~~~~~~~~~~~~D~v~e~~gv~v~Vd~~S~~~L~G~~IDyve~~~g~gF~f~NPN 95 (192)
T PRK11190 25 IRVFVINP-GTPNAECGVSYCPPDAVEATDTELKFDGFSAYVDELSAPFLEDAEIDFVTDQLGSQLTLKAPN 95 (192)
T ss_pred EEEEEECC-CcCCceeeeEEeecCCCCCCCEEEEeCCEEEEECcchHhHhCCCEEEEeecCCCCceEEECCC
Confidence 44555654 89976555433 11 1233333443444333 45677788999999999999986654
No 215
>PRK09502 iscA iron-sulfur cluster assembly protein; Provisional
Probab=29.21 E-value=57 Score=26.68 Aligned_cols=63 Identities=24% Similarity=0.405 Sum_probs=38.1
Q ss_pred CeEEEECCCCChhhhhhhhh--hhcCC--eEEcCCCCccc--cCCCCCccCCceeEEecCCCccccCccC
Q 012068 82 PLVLWLNGGPGCSSVAYGAS--EEIGP--FRINRNGSSLY--LNKYSWSREANILFLESPAGVGFSYTNT 145 (471)
Q Consensus 82 PlilWlnGGPG~SS~~~g~f--~e~GP--~~~~~~~~~~~--~N~~sW~~~anllfiDqPvGtGfSy~~~ 145 (471)
.|=|.+.+| |||++.|++- .|..+ ..+..++-++. .....+.+-+-|=|+|.+.|.||...++
T Consensus 25 ~LRi~v~~~-GCsG~~Y~l~~~~~~~~~D~~~~~~g~~v~id~~s~~~l~g~~IDy~~~~~~~~F~f~NP 93 (107)
T PRK09502 25 GLRLGVRTS-GCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNP 93 (107)
T ss_pred eEEEEEECC-CcCCeeeEeeecCCCCCCCEEEEcCCeEEEEeHHHHhHhCCCEEEEeeCCCCceEEEECC
Confidence 455666644 8888644443 33322 22333332332 2445677788999999999999987554
No 216
>PRK14565 triosephosphate isomerase; Provisional
Probab=29.18 E-value=1.1e+02 Score=29.08 Aligned_cols=53 Identities=21% Similarity=0.295 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCcc
Q 012068 155 NRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNY 226 (471)
Q Consensus 155 ~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~ 226 (471)
.+.+++.+.+++++. .+- -.| |||---|.-+..+.+. -++.|+.||.+.+++.
T Consensus 173 ~e~i~~~~~~Ir~~~------~~~-~Il----YGGSV~~~N~~~l~~~--------~~iDG~LvG~asl~~~ 225 (237)
T PRK14565 173 NDAIAEAFEIIRSYD------SKS-HII----YGGSVNQENIRDLKSI--------NQLSGVLVGSASLDVD 225 (237)
T ss_pred HHHHHHHHHHHHHhC------CCc-eEE----EcCccCHhhHHHHhcC--------CCCCEEEEechhhcHH
Confidence 356888889898863 111 223 9999999999998874 2499999999998875
No 217
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=28.73 E-value=72 Score=25.66 Aligned_cols=10 Identities=30% Similarity=0.301 Sum_probs=5.4
Q ss_pred hhHHHHHHHH
Q 012068 9 FSFSLAIFLF 18 (471)
Q Consensus 9 ~~~~~~~~~~ 18 (471)
+.|+++.++|
T Consensus 4 K~~llL~l~L 13 (95)
T PF07172_consen 4 KAFLLLGLLL 13 (95)
T ss_pred hHHHHHHHHH
Confidence 4455555555
No 218
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=28.19 E-value=46 Score=28.35 Aligned_cols=17 Identities=41% Similarity=0.616 Sum_probs=14.7
Q ss_pred CCCCCeEEEECCCCChh
Q 012068 78 ALKKPLVLWLNGGPGCS 94 (471)
Q Consensus 78 ~~~~PlilWlnGGPG~S 94 (471)
..++||||-|+|.||+.
T Consensus 49 ~p~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCCCEEEEeecCCCCc
Confidence 45789999999999984
No 219
>PRK06762 hypothetical protein; Provisional
Probab=27.95 E-value=34 Score=30.06 Aligned_cols=20 Identities=15% Similarity=0.428 Sum_probs=14.7
Q ss_pred CeEEEECCCCCh--hhhhhhhhh
Q 012068 82 PLVLWLNGGPGC--SSVAYGASE 102 (471)
Q Consensus 82 PlilWlnGGPG~--SS~~~g~f~ 102 (471)
|.+||+.|.||| |.+. -.+.
T Consensus 2 ~~li~i~G~~GsGKST~A-~~L~ 23 (166)
T PRK06762 2 TTLIIIRGNSGSGKTTIA-KQLQ 23 (166)
T ss_pred CeEEEEECCCCCCHHHHH-HHHH
Confidence 789999999998 4553 4443
No 220
>PTZ00333 triosephosphate isomerase; Provisional
Probab=27.94 E-value=1.3e+02 Score=28.86 Aligned_cols=59 Identities=24% Similarity=0.428 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHh-CCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCc
Q 012068 156 RTAQDALVFLIRWMSR-FPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDN 225 (471)
Q Consensus 156 ~~a~d~~~fL~~F~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp 225 (471)
+.+++++.++++++.. +.......+-|. |||---|.=+..+... .++.|+.||.+.+++
T Consensus 183 e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~--------~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 183 EQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ--------PDIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEehHhhhh
Confidence 5688899999998853 322222222222 8999999999998765 349999999998874
No 221
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=27.84 E-value=1.2e+02 Score=27.23 Aligned_cols=80 Identities=16% Similarity=0.213 Sum_probs=49.0
Q ss_pred eeEEecCCCccc-cCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHH--HHHHhcc
Q 012068 129 ILFLESPAGVGF-SYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKK--IIDYNSA 205 (471)
Q Consensus 129 llfiDqPvGtGf-Sy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~--i~~~n~~ 205 (471)
+--|+=|+..+. +|.. +..+.+.++...|+++..+-| +.++.|+|-|=|+.-+-.++.. +...
T Consensus 42 ~~~V~YpA~~~~~~y~~--------S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~~~l~~~--- 107 (179)
T PF01083_consen 42 VQGVEYPASLGPNSYGD--------SVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSGDGLPPD--- 107 (179)
T ss_dssp EEE--S---SCGGSCHH--------HHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHTTSSHH---
T ss_pred EEecCCCCCCCcccccc--------cHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHhccCChh---
Confidence 333556666665 3321 455678888899999999998 4589999999999877766655 1110
Q ss_pred CCCCeeeeee-eEeeccccCc
Q 012068 206 YSRPIINLKG-FIVGNAVTDN 225 (471)
Q Consensus 206 ~~~~~inLkG-i~IGNg~idp 225 (471)
..=++.+ +.+|||.-.+
T Consensus 108 ---~~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 108 ---VADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp ---HHHHEEEEEEES-TTTBT
T ss_pred ---hhhhEEEEEEecCCcccC
Confidence 1123566 5788887644
No 222
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=26.51 E-value=82 Score=28.98 Aligned_cols=55 Identities=25% Similarity=0.189 Sum_probs=37.4
Q ss_pred ceEEEEecCCCcccCchhHHHHHHhCCCCCCCCcccceeCCeeeeEEEEecCeEEEEEcCCccccccCChHHHHHHHHHH
Q 012068 377 LKIWVFSGDTDSVVPVTATRFSLSHLNLPIKTPWYPWYSGNQVGGWTEVYKGLTFATVRGAGHEVPLFQPRRALILFRSF 456 (471)
Q Consensus 377 irVLiy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~a~~mi~~f 456 (471)
.++++.+|+.|-++... ..++|.... .++.+++.+|.|+..-.-... .+.+.+|
T Consensus 150 ~~~lvi~g~~Ddvv~l~------~~l~~~~~~-------------------~~~~i~i~~a~HFF~gKl~~l-~~~i~~~ 203 (210)
T COG2945 150 SPGLVIQGDADDVVDLV------AVLKWQESI-------------------KITVITIPGADHFFHGKLIEL-RDTIADF 203 (210)
T ss_pred CCceeEecChhhhhcHH------HHHHhhcCC-------------------CCceEEecCCCceecccHHHH-HHHHHHH
Confidence 78999999999555555 444443322 346799999999987665544 4555555
Q ss_pred H
Q 012068 457 L 457 (471)
Q Consensus 457 l 457 (471)
+
T Consensus 204 l 204 (210)
T COG2945 204 L 204 (210)
T ss_pred h
Confidence 5
No 223
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=25.59 E-value=62 Score=30.36 Aligned_cols=27 Identities=22% Similarity=0.308 Sum_probs=23.1
Q ss_pred CceEEEEecCCCcccCchhHHHHHHhC
Q 012068 376 GLKIWVFSGDTDSVVPVTATRFSLSHL 402 (471)
Q Consensus 376 girVLiy~Gd~D~i~~~~g~~~~i~~L 402 (471)
+++++|++|+.|..|+....++.+++.
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHH
Confidence 578999999999999999888777653
No 224
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=25.47 E-value=66 Score=34.83 Aligned_cols=46 Identities=13% Similarity=0.142 Sum_probs=29.0
Q ss_pred CCceEEEecccCccchHHHHHHHHHHhccC-----------CCCeeeeeeeEeeccc
Q 012068 177 YREFYIAGESYAGHYVPQLAKKIIDYNSAY-----------SRPIINLKGFIVGNAV 222 (471)
Q Consensus 177 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~~-----------~~~~inLkGi~IGNg~ 222 (471)
++++.|.|||+||.++-.|..........+ -+..|++.|-.+|.+-
T Consensus 212 gkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs~K 268 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLGVPK 268 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCCcHH
Confidence 579999999999988877765421100000 0135777777777553
No 225
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=25.00 E-value=56 Score=30.01 Aligned_cols=42 Identities=17% Similarity=0.275 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHH
Q 012068 155 NRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAK 197 (471)
Q Consensus 155 ~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~ 197 (471)
+...+++.. ...+++..|+-...++-++|-|+||.++-.+|.
T Consensus 76 ~~~~~~~~a-a~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~ 117 (218)
T PF01738_consen 76 EQVAADLQA-AVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAA 117 (218)
T ss_dssp HHHHHHHHH-HHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHC
T ss_pred HHHHHHHHH-HHHHHHhccccCCCcEEEEEEecchHHhhhhhh
Confidence 344555544 455666777666678999999999998776664
No 226
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=24.67 E-value=1.2e+02 Score=29.42 Aligned_cols=56 Identities=14% Similarity=0.169 Sum_probs=30.5
Q ss_pred HHHHHHHH----HHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeecccc
Q 012068 158 AQDALVFL----IRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVT 223 (471)
Q Consensus 158 a~d~~~fL----~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~i 223 (471)
++.+.+|| +=|.+.-=..+..+--|+||||||-.+-. .++++.+. +.-+++++|-+
T Consensus 113 ~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~---aLL~~p~~-------F~~y~~~SPSl 172 (264)
T COG2819 113 GDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLF---ALLTYPDC-------FGRYGLISPSL 172 (264)
T ss_pred hHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHH---HHhcCcch-------hceeeeecchh
Confidence 34444444 44444311223445899999999997644 34443221 55555555543
No 227
>PF08060 NOSIC: NOSIC (NUC001) domain; InterPro: IPR012976 This is the central domain in Nop56/SIK1-like proteins [].; PDB: 3PLA_K 3ICX_B 3ID6_A 3ID5_E 3NVM_A 3NMU_B 2NNW_C 3NVI_A 3NVK_A 2OZB_E ....
Probab=24.65 E-value=73 Score=22.50 Aligned_cols=22 Identities=23% Similarity=0.490 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHH-hCCCCC
Q 012068 155 NRTAQDALVFLIRWMS-RFPQYK 176 (471)
Q Consensus 155 ~~~a~d~~~fL~~F~~-~fp~~~ 176 (471)
+.....++.++++|+. +|||+.
T Consensus 13 d~ei~~~~~~lre~Y~~~FPEL~ 35 (53)
T PF08060_consen 13 DKEINLLHMRLREWYSWHFPELE 35 (53)
T ss_dssp HHHHHHHHHHHHHHHTTTSTTHH
T ss_pred HHHHHHHHHHHHHHHHccchhHH
Confidence 4566778899999995 699985
No 228
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=24.31 E-value=1.7e+02 Score=27.38 Aligned_cols=106 Identities=17% Similarity=0.194 Sum_probs=54.1
Q ss_pred CeEEEECCCCChhhhhhhhhhhcCCeEE-------------cCCCCc--cccCCC-CCccCCceeEEecCCCccccCccC
Q 012068 82 PLVLWLNGGPGCSSVAYGASEEIGPFRI-------------NRNGSS--LYLNKY-SWSREANILFLESPAGVGFSYTNT 145 (471)
Q Consensus 82 PlilWlnGGPG~SS~~~g~f~e~GP~~~-------------~~~~~~--~~~N~~-sW~~~anllfiDqPvGtGfSy~~~ 145 (471)
=|++=..|-||...+. |--.|.+|..- ..++.. ++--.| ...-..=.+||+- |+.=
T Consensus 30 ~LTvH~tGN~~~a~~G-G~p~~la~a~P~~~~~~l~~l~~~~~e~y~v~~EaTHHGPt~~~~Ps~FvEI--GSte----- 101 (213)
T PF04414_consen 30 SLTVHTTGNFGEAEYG-GKPGELAPANPRLMKALLRALKKHAPEGYEVSYEATHHGPTDLSVPSVFVEI--GSTE----- 101 (213)
T ss_dssp EEEEE--EESS--TTS-S-TTEE-BB-HHHHHHHHHHHHHHGGCT-EEEE--S-SS-----SBEEEEEE--EESH-----
T ss_pred eEEEeCCCCCCccccC-CCCCccccCCHHHHHHHHHHHHHhccCCCEEEEEeeccCCCCCCCCcEEEEe--CCCH-----
Confidence 3677788888875565 65566555431 111111 111111 1223455788883 3221
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCC-CceEEEecccCccchHHHHHHHHHH
Q 012068 146 SSNLKDSGDNRTAQDALVFLIRWMSRFPQYKY-REFYIAGESYAGHYVPQLAKKIIDY 202 (471)
Q Consensus 146 ~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~-~~~yi~GESYgG~yvP~lA~~i~~~ 202 (471)
. . ++++.+++-+.+.|.+.+..-++-.- +++.-+| ||||+|.+...+++.
T Consensus 102 -~-e--W~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~~ 152 (213)
T PF04414_consen 102 -E-E--WNDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALET 152 (213)
T ss_dssp -H-H--HT-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHHC
T ss_pred -H-H--hCChHHHHHHHHHHHHHhcccccccccceeEEec---CcccchhhhhhhhcC
Confidence 1 1 47888888888888888877654321 4566688 999999999888874
No 229
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=24.20 E-value=3.2e+02 Score=28.90 Aligned_cols=114 Identities=15% Similarity=0.276 Sum_probs=68.9
Q ss_pred eEEEEEEEecCCCCCCCeEEEECCCCChhhhhhhhhh--hc-CCeEEcCCCCccccCCCCCccCCceeEEecCCCccccC
Q 012068 66 ALFYWLTEAASSALKKPLVLWLNGGPGCSSVAYGASE--EI-GPFRINRNGSSLYLNKYSWSREANILFLESPAGVGFSY 142 (471)
Q Consensus 66 ~lFy~~~es~~~~~~~PlilWlnGGPG~SS~~~g~f~--e~-GP~~~~~~~~~~~~N~~sW~~~anllfiDqPvGtGfSy 142 (471)
.++|+|-+-+ -+-||.+++.|==.+=+.. |.++ .+ .||.+ |=| |.=-|=++
T Consensus 277 Ei~yYFnPGD---~KPPL~VYFSGyR~aEGFE-gy~MMk~Lg~PfLL---------------------~~D-pRleGGaF 330 (511)
T TIGR03712 277 EFIYYFNPGD---FKPPLNVYFSGYRPAEGFE-GYFMMKRLGAPFLL---------------------IGD-PRLEGGAF 330 (511)
T ss_pred eeEEecCCcC---CCCCeEEeeccCcccCcch-hHHHHHhcCCCeEE---------------------eec-ccccccee
Confidence 4566553322 3459999999965555544 4443 32 25554 444 43334343
Q ss_pred ccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccc
Q 012068 143 TNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAV 222 (471)
Q Consensus 143 ~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~ 222 (471)
-. +.++.-+.+.+.|++-+..- .|..+++.|.|=|.|..=+-+.+. .++-.+|++|=|.
T Consensus 331 Yl--------Gs~eyE~~I~~~I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYga------------~l~P~AIiVgKPL 389 (511)
T TIGR03712 331 YL--------GSDEYEQGIINVIQEKLDYL-GFDHDQLILSGLSMGTFGALYYGA------------KLSPHAIIVGKPL 389 (511)
T ss_pred ee--------CcHHHHHHHHHHHHHHHHHh-CCCHHHeeeccccccchhhhhhcc------------cCCCceEEEcCcc
Confidence 11 33444455666666666442 466789999999999875544443 4567788999888
Q ss_pred cCcc
Q 012068 223 TDNY 226 (471)
Q Consensus 223 idp~ 226 (471)
++-.
T Consensus 390 ~NLG 393 (511)
T TIGR03712 390 VNLG 393 (511)
T ss_pred cchh
Confidence 7754
No 230
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=23.94 E-value=81 Score=30.55 Aligned_cols=38 Identities=18% Similarity=0.220 Sum_probs=27.2
Q ss_pred CceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeecccc
Q 012068 178 REFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVT 223 (471)
Q Consensus 178 ~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~i 223 (471)
.++-++|||-||+-+=++|..+. ..+++..++-.+|+-
T Consensus 120 ~klal~GHSrGGktAFAlALg~a--------~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 120 SKLALSGHSRGGKTAFALALGYA--------TSLKFSALIGIDPVA 157 (307)
T ss_pred ceEEEeecCCccHHHHHHHhccc--------ccCchhheecccccC
Confidence 37999999999998887776443 235566666666553
No 231
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=23.88 E-value=2.3e+02 Score=27.64 Aligned_cols=66 Identities=20% Similarity=0.117 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHhCCC--C-CCCceEEEecccCccchHHHHHHHHHHhccCCCCeee--eeeeEeeccccCcc
Q 012068 156 RTAQDALVFLIRWMSRFPQ--Y-KYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIIN--LKGFIVGNAVTDNY 226 (471)
Q Consensus 156 ~~a~d~~~fL~~F~~~fp~--~-~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~in--LkGi~IGNg~idp~ 226 (471)
..+..+++.++.-.+..+. + .+.++.|+|.|=||+=. ..|.++... -.+.++ |.|.+.|.+..|..
T Consensus 46 ~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l~~~----YApeL~~~l~Gaa~gg~~~dl~ 116 (290)
T PF03583_consen 46 SEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAELAPS----YAPELNRDLVGAAAGGPPADLA 116 (290)
T ss_pred hHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHHhHH----hCcccccceeEEeccCCccCHH
Confidence 4455555555554433332 2 35689999999988743 344444332 135688 99999999877654
No 232
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. This family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases. N-4 cytosine-specific DNA methylases (2.1.1.113 from EC) [] are enzymes that specifically methylate the amino group at the C-4 position of cytosines in DNA. Such enzymes are found as components of type II restriction-modification systems in prokaryotes. Such enzymes recognise a specific sequence in DNA and methylate a cytosine in that sequence. By this action they protect DNA from cleavage by type II restriction enzymes that recognise the same sequence. N-6 adenine-specific DNA methylases (2.1.1.72 from EC) (A-Mtase) are enzymes that specifically methylate the amino group at the C-6 position of adenines in DNA. Such enzymes are found in the three existing types of bacterial restriction-modification systems (in type I system the A-Mtase is the product of the hsdM gene, and in type III it is the product of the mod gene). All of these enzymes recognise a specific sequence in DNA and methylate an adenine in that sequence.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2ZIF_A 2ZIE_A 2ZIG_A 1NW6_A 1NW8_A 1NW7_A 1NW5_A 1EG2_A 1BOO_A 1G60_B ....
Probab=23.42 E-value=81 Score=28.80 Aligned_cols=59 Identities=17% Similarity=0.427 Sum_probs=28.8
Q ss_pred ceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCC--CceEE-EecccCcc
Q 012068 128 NILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKY--REFYI-AGESYAGH 190 (471)
Q Consensus 128 nllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~--~~~yi-~GESYgG~ 190 (471)
++|+.|+|=++|..+.... .+ ++....++..+++..++...-+... .-++| .+.+.-..
T Consensus 2 dliitDPPY~~~~~~~~~~-~~---~~~~~~~~y~~~~~~~~~~~~rvLk~~g~~~i~~~~~~~~~ 63 (231)
T PF01555_consen 2 DLIITDPPYNIGKDYNNYF-DY---GDNKNHEEYLEWMEEWLKECYRVLKPGGSIFIFIDDREIAG 63 (231)
T ss_dssp EEEEE---TSSSCS------CS---CHCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE-CCEECT
T ss_pred CEEEECCCCCCCCCcchhh-hc---cCCCCHHHHHHHHHHHHHHHHhhcCCCeeEEEEecchhhhH
Confidence 6899999999999862221 11 3344566667777777654322221 12444 35555444
No 233
>PRK14731 coaE dephospho-CoA kinase; Provisional
Probab=22.63 E-value=98 Score=28.54 Aligned_cols=32 Identities=25% Similarity=0.376 Sum_probs=26.4
Q ss_pred CCCeEEEECCCCCh--hhhhhhhhhhcCCeEEcCC
Q 012068 80 KKPLVLWLNGGPGC--SSVAYGASEEIGPFRINRN 112 (471)
Q Consensus 80 ~~PlilWlnGGPG~--SS~~~g~f~e~GP~~~~~~ 112 (471)
..|++|=+.||||| |.+. -.|.+.|-..++.|
T Consensus 3 ~~~~~igitG~igsGKSt~~-~~l~~~g~~v~d~D 36 (208)
T PRK14731 3 SLPFLVGVTGGIGSGKSTVC-RFLAEMGCELFEAD 36 (208)
T ss_pred CCCEEEEEECCCCCCHHHHH-HHHHHCCCeEEecc
Confidence 45789999999999 6674 88888898888776
No 234
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=22.37 E-value=48 Score=29.30 Aligned_cols=13 Identities=46% Similarity=0.968 Sum_probs=10.7
Q ss_pred CCeEEEECCCCCh
Q 012068 81 KPLVLWLNGGPGC 93 (471)
Q Consensus 81 ~PlilWlnGGPG~ 93 (471)
+|.+|||.|=||+
T Consensus 1 ~g~vIwltGlsGs 13 (156)
T PF01583_consen 1 KGFVIWLTGLSGS 13 (156)
T ss_dssp S-EEEEEESSTTS
T ss_pred CCEEEEEECCCCC
Confidence 4899999998887
No 235
>KOG3877 consensus NADH:ubiquinone oxidoreductase, NDUFA10/42kDa subunit [Energy production and conversion]
Probab=22.14 E-value=1.1e+02 Score=29.94 Aligned_cols=50 Identities=20% Similarity=0.486 Sum_probs=35.0
Q ss_pred ccCCceeEEecCCCccccCccCCCCCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccc
Q 012068 124 SREANILFLESPAGVGFSYTNTSSNLKDSGDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHY 191 (471)
Q Consensus 124 ~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~y 191 (471)
++++-||-||-|+|+|.|. .|+.+.+-|- |..||+++--.+|+ .|||+-.
T Consensus 68 ~enSkvI~VeGnI~sGK~k--------------lAKelAe~Lg--f~hfP~~~~d~iyv--dsyg~D~ 117 (393)
T KOG3877|consen 68 HENSKVIVVEGNIGSGKTK--------------LAKELAEQLG--FVHFPEFRMDDIYV--DSYGNDL 117 (393)
T ss_pred cccceEEEEeCCcccCchh--------------HHHHHHHHhC--Ccccccccccceee--cccCccc
Confidence 5677899999999999763 2333333222 46899988766776 7888764
No 236
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=22.08 E-value=1.7e+02 Score=19.25 Aligned_cols=27 Identities=15% Similarity=0.421 Sum_probs=12.6
Q ss_pred eEEEEEEEecCCCCCCCeEEEECCCCC
Q 012068 66 ALFYWLTEAASSALKKPLVLWLNGGPG 92 (471)
Q Consensus 66 ~lFy~~~es~~~~~~~PlilWlnGGPG 92 (471)
+-+|||-.+........--+|+.+||+
T Consensus 12 NrYwwf~~s~~~~~~~~~~~~v~~~~~ 38 (38)
T PF15613_consen 12 NRYWWFSSSSSNSQYYNGGRFVEQGPD 38 (38)
T ss_pred ceEEEEecccccCCCCCceEEEEeCCC
Confidence 345666334333333344455555664
No 237
>PF07933 DUF1681: Protein of unknown function (DUF1681); InterPro: IPR012466 NECAP 1 localises to clathrin-coated pits and direct binding to the globular ear domain of the alpha-adaptin subunit (alpha-ear) of the adaptor protein 2 (AP-2) complex. This interaction is mediated by a specific motif, WVQF, that uses a distinct alpha-ear interface relative to known alpha-ear-binding partners. Disruption of this interaction blocks clathrin-mediated endocytosis [].; GO: 0006897 endocytosis, 0016020 membrane; PDB: 1TQZ_A.
Probab=22.00 E-value=71 Score=28.37 Aligned_cols=55 Identities=22% Similarity=0.086 Sum_probs=15.0
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeee
Q 012068 153 GDNRTAQDALVFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKG 215 (471)
Q Consensus 153 ~~~~~a~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkG 215 (471)
.+...|-||-.+||++.+. ..+.--...++-+.--.|..-..|.+ ++++.|||+|
T Consensus 106 ~eRsdAFDF~vaLqd~~k~----~~~~~~~~~~~~~~~~~p~~D~sLKe----GetI~ini~g 160 (160)
T PF07933_consen 106 RERSDAFDFNVALQDHRKY----LKREKEAEEQSQAAESQPKKDYSLKE----GETIKINIGG 160 (160)
T ss_dssp S-HHHHHHHHHHHHHHHS-----SS--------------------------------------
T ss_pred ccccccccHHHHHHHHHHH----hhchhhhhhhhcccCCCCccCCcCCC----CCEEEEecCC
Confidence 4556899999999999854 22233333333333333433333333 2456788876
No 238
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=20.88 E-value=73 Score=29.21 Aligned_cols=29 Identities=17% Similarity=-0.012 Sum_probs=24.7
Q ss_pred ceEEEEecCCCcccCchhHHHHHHhCCCC
Q 012068 377 LKIWVFSGDTDSVVPVTATRFSLSHLNLP 405 (471)
Q Consensus 377 irVLiy~Gd~D~i~~~~g~~~~i~~L~w~ 405 (471)
-+++|.+|..|.+||...++...+.|..-
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 45789999999999999999998887543
No 239
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=20.76 E-value=97 Score=22.37 Aligned_cols=22 Identities=9% Similarity=0.262 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCC
Q 012068 156 RTAQDALVFLIRWMSRFPQYKY 177 (471)
Q Consensus 156 ~~a~d~~~fL~~F~~~fp~~~~ 177 (471)
+.-+++++.|+.|++.+|.+..
T Consensus 5 eiPe~L~~~m~~fie~hP~WDQ 26 (57)
T PF10929_consen 5 EIPEDLHQAMKDFIETHPNWDQ 26 (57)
T ss_pred cccHHHHHHHHHHHHcCCCchH
Confidence 4567899999999999999975
No 240
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=20.43 E-value=1.8e+02 Score=32.12 Aligned_cols=61 Identities=20% Similarity=0.315 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHh-CCCCCCCceEEEecccCccchHHHHHHHHHHhccCCCCeeeeeeeEeeccccCcc
Q 012068 155 NRTAQDALVFLIRWMSR-FPQYKYREFYIAGESYAGHYVPQLAKKIIDYNSAYSRPIINLKGFIVGNAVTDNY 226 (471)
Q Consensus 155 ~~~a~d~~~fL~~F~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~IGNg~idp~ 226 (471)
-+.|++++.||++++.. +-+-....+=|. |||---|.=+..|... -++.|+.||..-+++.
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~--------~diDG~LVGgASL~~~ 635 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQ--------PDIDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcC--------CCCCeEEeehHhcCHH
Confidence 35688999999999853 322111122222 9999999999999876 3499999999988874
No 241
>COG3596 Predicted GTPase [General function prediction only]
Probab=20.03 E-value=1.6e+02 Score=28.80 Aligned_cols=60 Identities=22% Similarity=0.291 Sum_probs=36.4
Q ss_pred CCCCeEEEECC--CCChhhhhhhhhhh-cCCeEEcCCCCccccCCCCCccC--CceeEEecCCCcccc
Q 012068 79 LKKPLVLWLNG--GPGCSSVAYGASEE-IGPFRINRNGSSLYLNKYSWSRE--ANILFLESPAGVGFS 141 (471)
Q Consensus 79 ~~~PlilWlnG--GPG~SS~~~g~f~e-~GP~~~~~~~~~~~~N~~sW~~~--anllfiDqPvGtGfS 141 (471)
+..|+.+.|-| |-|=||+.-.+|+. .-|.....-+ ..+-.+.|... -||+.+|.| |.|=|
T Consensus 36 ~~~pvnvLi~G~TG~GKSSliNALF~~~~~~v~~vg~~--t~~~~~~~~~~~~~~l~lwDtP-G~gdg 100 (296)
T COG3596 36 EKEPVNVLLMGATGAGKSSLINALFQGEVKEVSKVGVG--TDITTRLRLSYDGENLVLWDTP-GLGDG 100 (296)
T ss_pred ccCceeEEEecCCCCcHHHHHHHHHhccCceeeecccC--CCchhhHHhhccccceEEecCC-Ccccc
Confidence 56799999999 66779975466643 3343322211 22233445443 799999998 55543
Done!