Query 012075
Match_columns 471
No_of_seqs 298 out of 2424
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 08:21:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012075.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012075hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3098 Uncharacterized conser 100.0 9.5E-30 2.1E-34 253.6 27.7 368 23-410 5-411 (461)
2 KOG0569 Permease of the major 99.9 3.6E-25 7.8E-30 222.9 20.4 358 61-446 63-461 (485)
3 TIGR01299 synapt_SV2 synaptic 99.9 7.7E-23 1.7E-27 218.5 25.5 115 56-173 200-314 (742)
4 KOG0254 Predicted transporter 99.9 1.4E-22 3E-27 211.9 26.0 358 61-448 92-492 (513)
5 TIGR00887 2A0109 phosphate:H+ 99.9 8.7E-22 1.9E-26 205.5 29.3 112 59-173 57-174 (502)
6 PRK10642 proline/glycine betai 99.9 6.5E-22 1.4E-26 205.8 25.4 303 64-395 63-386 (490)
7 PRK11551 putative 3-hydroxyphe 99.9 3.2E-21 6.9E-26 195.7 27.6 314 56-409 48-366 (406)
8 TIGR00879 SP MFS transporter, 99.9 8.2E-22 1.8E-26 203.1 22.6 370 57-445 70-476 (481)
9 PRK03545 putative arabinose tr 99.9 2.2E-20 4.7E-25 188.7 30.4 334 25-408 7-350 (390)
10 PRK10077 xylE D-xylose transpo 99.9 4.2E-21 9E-26 199.1 24.9 366 57-445 54-463 (479)
11 PRK09705 cynX putative cyanate 99.9 2E-20 4.2E-25 189.3 27.0 352 47-446 33-388 (393)
12 PRK11273 glpT sn-glycerol-3-ph 99.9 3.1E-20 6.7E-25 191.3 28.6 368 55-451 60-448 (452)
13 PRK12307 putative sialic acid 99.9 2E-20 4.3E-25 191.1 26.5 316 56-408 51-378 (426)
14 COG2814 AraJ Arabinose efflux 99.9 6.2E-20 1.4E-24 179.9 27.6 341 21-409 7-357 (394)
15 PRK11663 regulatory protein Uh 99.9 3.6E-20 7.7E-25 189.9 26.5 323 55-407 55-393 (434)
16 PRK09556 uhpT sugar phosphate 99.9 1.1E-20 2.4E-25 195.4 22.6 354 21-402 22-401 (467)
17 PRK15402 multidrug efflux syst 99.9 4.1E-19 8.8E-24 180.4 30.8 349 23-409 9-366 (406)
18 TIGR02332 HpaX 4-hydroxyphenyl 99.9 2.9E-19 6.3E-24 181.8 29.1 332 48-408 33-390 (412)
19 TIGR00900 2A0121 H+ Antiporter 99.9 2.6E-19 5.6E-24 178.1 27.9 317 56-407 32-357 (365)
20 TIGR00898 2A0119 cation transp 99.9 9.1E-20 2E-24 190.5 25.1 315 57-407 126-466 (505)
21 PRK10489 enterobactin exporter 99.9 2.4E-19 5.1E-24 182.8 27.1 313 57-409 51-370 (417)
22 TIGR00893 2A0114 d-galactonate 99.9 9.7E-20 2.1E-24 182.7 23.3 327 56-409 27-369 (399)
23 PF00083 Sugar_tr: Sugar (and 99.8 6.4E-25 1.4E-29 226.0 -16.0 362 60-447 48-444 (451)
24 TIGR00897 2A0118 polyol permea 99.8 1.7E-18 3.6E-23 175.7 31.2 319 56-408 46-371 (402)
25 PRK12382 putative transporter; 99.8 3.1E-18 6.6E-23 173.1 31.5 306 55-408 48-359 (392)
26 PRK05122 major facilitator sup 99.8 1.5E-18 3.3E-23 175.7 29.3 303 56-406 49-357 (399)
27 TIGR00710 efflux_Bcr_CflA drug 99.8 5.1E-18 1.1E-22 170.5 31.9 313 56-407 38-356 (385)
28 PLN00028 nitrate transmembrane 99.8 1.8E-18 3.9E-23 179.2 28.6 238 57-304 70-318 (476)
29 PRK10213 nepI ribonucleoside t 99.8 6.1E-18 1.3E-22 171.1 31.7 305 55-408 52-361 (394)
30 TIGR00891 2A0112 putative sial 99.8 1.2E-18 2.5E-23 176.2 26.4 322 55-408 44-385 (405)
31 PF07690 MFS_1: Major Facilita 99.8 6.5E-19 1.4E-23 174.4 23.8 314 56-403 30-351 (352)
32 PRK03893 putative sialic acid 99.8 1.4E-18 3.1E-23 181.0 27.1 116 55-173 52-167 (496)
33 PRK14995 methyl viologen resis 99.8 2.5E-18 5.4E-23 179.1 28.9 352 25-407 4-407 (495)
34 TIGR00890 2A0111 Oxalate/Forma 99.8 1.1E-18 2.4E-23 174.2 25.2 312 56-408 36-352 (377)
35 PRK09952 shikimate transporter 99.8 2E-18 4.2E-23 177.2 27.0 102 66-170 72-181 (438)
36 PRK10406 alpha-ketoglutarate t 99.8 4.4E-18 9.5E-23 174.3 29.1 105 63-170 68-180 (432)
37 TIGR00892 2A0113 monocarboxyla 99.8 1.4E-18 3.1E-23 179.0 25.5 320 57-408 53-390 (455)
38 TIGR00886 2A0108 nitrite extru 99.8 1.7E-18 3.7E-23 172.9 24.5 317 55-398 34-364 (366)
39 TIGR00894 2A0114euk Na(+)-depe 99.8 4.3E-18 9.2E-23 176.1 28.0 232 59-298 77-323 (465)
40 TIGR00895 2A0115 benzoate tran 99.8 5.4E-18 1.2E-22 170.6 28.1 317 56-406 50-393 (398)
41 PRK15403 multidrug efflux syst 99.8 8.2E-18 1.8E-22 171.2 29.4 228 55-298 48-280 (413)
42 PRK11102 bicyclomycin/multidru 99.8 8E-18 1.7E-22 168.9 28.6 242 56-314 24-270 (377)
43 TIGR00711 efflux_EmrB drug res 99.8 5.5E-18 1.2E-22 176.0 28.3 322 56-407 35-404 (485)
44 PRK08633 2-acyl-glycerophospho 99.8 2.8E-18 6E-23 196.5 28.3 318 60-407 49-378 (1146)
45 PRK11195 lysophospholipid tran 99.8 4.4E-18 9.5E-23 172.1 26.4 308 57-408 37-351 (393)
46 PRK10504 putative transporter; 99.8 1.3E-17 2.9E-22 172.6 28.8 321 56-407 43-409 (471)
47 PRK03633 putative MFS family t 99.8 1.8E-17 3.9E-22 166.9 28.4 300 55-408 38-342 (381)
48 PRK15034 nitrate/nitrite trans 99.8 1.6E-17 3.5E-22 168.4 26.3 241 55-314 67-326 (462)
49 PRK10091 MFS transport protein 99.8 4.4E-17 9.6E-22 164.1 29.3 232 56-312 36-273 (382)
50 TIGR00712 glpT glycerol-3-phos 99.8 1.1E-17 2.4E-22 171.7 25.0 245 55-305 58-318 (438)
51 PRK11043 putative transporter; 99.8 9.4E-17 2E-21 162.7 30.9 308 55-405 38-349 (401)
52 PRK15075 citrate-proton sympor 99.8 6.4E-17 1.4E-21 165.8 29.4 288 70-395 68-375 (434)
53 TIGR00881 2A0104 phosphoglycer 99.8 9.2E-18 2E-22 167.7 21.8 322 56-406 28-365 (379)
54 PRK09874 drug efflux system pr 99.8 5.5E-17 1.2E-21 164.5 27.3 303 61-408 57-368 (408)
55 PRK10133 L-fucose transporter; 99.8 7.8E-17 1.7E-21 165.1 28.6 298 49-380 52-377 (438)
56 PRK10473 multidrug efflux syst 99.8 1.8E-16 3.8E-21 160.2 30.6 237 56-312 36-277 (392)
57 PRK03699 putative transporter; 99.8 1.5E-16 3.3E-21 161.0 29.3 306 55-407 39-349 (394)
58 TIGR00903 2A0129 major facilit 99.8 1.1E-16 2.4E-21 160.1 27.6 306 56-405 24-334 (368)
59 PRK11010 ampG muropeptide tran 99.8 2E-16 4.2E-21 164.5 30.1 223 73-310 60-295 (491)
60 KOG2533 Permease of the major 99.8 2.3E-17 4.9E-22 168.6 20.9 236 58-299 81-336 (495)
61 PRK11646 multidrug resistance 99.8 1.9E-16 4.1E-21 160.5 27.0 307 56-408 44-354 (400)
62 cd06174 MFS The Major Facilita 99.8 1.2E-16 2.5E-21 157.7 23.8 285 56-408 32-322 (352)
63 TIGR00883 2A0106 metabolite-pr 99.8 1.4E-16 3.1E-21 159.9 24.1 305 68-405 45-367 (394)
64 KOG0255 Synaptic vesicle trans 99.8 9E-17 2E-21 168.6 23.5 110 57-170 117-226 (521)
65 PRK11652 emrD multidrug resist 99.8 5.7E-16 1.2E-20 156.6 27.2 310 55-408 40-355 (394)
66 TIGR00899 2A0120 sugar efflux 99.7 9E-16 1.9E-20 153.7 27.9 306 56-408 31-344 (375)
67 KOG1330 Sugar transporter/spin 99.7 8.3E-18 1.8E-22 164.6 11.9 239 50-299 60-310 (493)
68 PRK06814 acylglycerophosphoeth 99.7 1.1E-15 2.4E-20 174.9 30.9 327 59-407 53-390 (1140)
69 PRK10054 putative transporter; 99.7 2.1E-15 4.6E-20 152.6 26.5 307 56-408 41-354 (395)
70 PF05977 MFS_3: Transmembrane 99.7 1.1E-14 2.4E-19 151.0 31.8 313 57-408 44-364 (524)
71 COG2271 UhpC Sugar phosphate p 99.7 9E-16 1.9E-20 149.1 21.8 243 55-307 61-323 (448)
72 TIGR00896 CynX cyanate transpo 99.7 2E-15 4.3E-20 150.4 24.6 302 55-403 32-338 (355)
73 KOG2532 Permease of the major 99.7 2.8E-15 6E-20 153.0 24.1 232 59-299 74-321 (466)
74 TIGR00901 2A0125 AmpG-related 99.7 3.9E-15 8.4E-20 148.4 24.4 302 75-397 38-355 (356)
75 KOG0252 Inorganic phosphate tr 99.7 2.4E-17 5.2E-22 160.8 7.8 115 58-172 84-202 (538)
76 TIGR00885 fucP L-fucose:H+ sym 99.7 2.2E-14 4.8E-19 145.7 28.8 119 55-173 35-153 (410)
77 PF05978 UNC-93: Ion channel r 99.7 1.5E-16 3.2E-21 137.3 10.9 116 55-174 34-149 (156)
78 TIGR00806 rfc RFC reduced fola 99.7 3.6E-14 7.8E-19 141.8 26.8 147 55-210 58-207 (511)
79 KOG3764 Vesicular amine transp 99.7 4.2E-15 9.1E-20 142.8 18.3 218 61-298 105-332 (464)
80 PRK09528 lacY galactoside perm 99.7 1.6E-14 3.4E-19 147.5 23.9 318 55-407 43-372 (420)
81 TIGR00889 2A0110 nucleoside tr 99.7 4E-14 8.7E-19 144.3 26.1 342 55-442 35-405 (418)
82 PRK15011 sugar efflux transpor 99.7 1.2E-13 2.5E-18 139.8 29.1 304 57-409 50-362 (393)
83 KOG2615 Permease of the major 99.6 2.1E-14 4.5E-19 137.3 21.0 110 60-173 70-179 (451)
84 TIGR00805 oat sodium-independe 99.6 3.6E-15 7.8E-20 158.9 17.7 115 59-173 69-231 (633)
85 TIGR00792 gph sugar (Glycoside 99.6 6.3E-14 1.4E-18 143.6 24.6 320 56-407 33-374 (437)
86 COG2223 NarK Nitrate/nitrite t 99.6 5.7E-14 1.2E-18 136.8 20.8 306 51-391 42-353 (417)
87 KOG3097 Predicted membrane pro 99.6 2.1E-15 4.7E-20 140.8 10.1 331 5-371 11-388 (390)
88 TIGR00882 2A0105 oligosacchari 99.6 6.3E-13 1.4E-17 134.5 27.3 315 56-407 36-364 (396)
89 TIGR00902 2A0127 phenyl propri 99.6 9.9E-13 2.2E-17 132.5 28.5 305 56-409 37-351 (382)
90 KOG2504 Monocarboxylate transp 99.6 1.5E-13 3.3E-18 142.0 21.3 317 60-409 83-446 (509)
91 PRK11902 ampG muropeptide tran 99.6 1.5E-12 3.2E-17 132.1 28.1 225 72-311 46-283 (402)
92 PF06609 TRI12: Fungal trichot 99.6 1.9E-12 4.2E-17 134.4 28.4 137 65-210 85-222 (599)
93 PRK11128 putative 3-phenylprop 99.6 9.6E-13 2.1E-17 132.6 25.7 303 56-407 37-349 (382)
94 PRK10207 dipeptide/tripeptide 99.5 5.3E-12 1.1E-16 131.0 28.1 114 57-173 49-166 (489)
95 TIGR01301 GPH_sucrose GPH fami 99.5 9.6E-12 2.1E-16 127.2 28.0 338 57-405 38-436 (477)
96 TIGR00924 yjdL_sub1_fam amino 99.5 2.5E-11 5.4E-16 125.7 30.5 115 56-173 46-164 (475)
97 PTZ00207 hypothetical protein; 99.5 5.4E-12 1.2E-16 131.8 25.3 98 71-169 74-174 (591)
98 TIGR00788 fbt folate/biopterin 99.5 3.7E-12 8.1E-17 131.6 23.6 377 57-461 60-466 (468)
99 KOG0253 Synaptic vesicle trans 99.5 3.7E-13 8E-18 128.0 13.6 347 60-446 115-526 (528)
100 PF11700 ATG22: Vacuole efflux 99.4 1.1E-10 2.4E-15 120.1 29.3 359 61-448 73-476 (477)
101 COG0738 FucP Fucose permease [ 99.4 3.9E-11 8.4E-16 116.5 22.7 287 56-379 46-353 (422)
102 PRK10429 melibiose:sodium symp 99.4 8.3E-11 1.8E-15 122.0 26.1 325 56-406 40-386 (473)
103 TIGR02718 sider_RhtX_FptX side 99.4 1.4E-10 3E-15 117.2 27.1 305 68-408 48-361 (390)
104 PRK09584 tppB putative tripept 99.4 3.6E-10 7.9E-15 117.8 30.8 98 73-173 72-173 (500)
105 PRK09669 putative symporter Ya 99.4 1.3E-10 2.8E-15 119.6 26.4 319 56-407 43-382 (444)
106 KOG4686 Predicted sugar transp 99.3 4.8E-11 1E-15 109.9 15.0 105 64-168 81-190 (459)
107 PF13347 MFS_2: MFS/sugar tran 99.3 6.9E-11 1.5E-15 121.0 16.9 320 56-407 35-378 (428)
108 KOG2563 Permease of the major 99.2 2.8E-10 6.1E-15 111.9 17.0 274 18-298 36-327 (480)
109 COG2270 Permeases of the major 99.2 3.4E-09 7.4E-14 103.8 23.6 311 61-405 61-395 (438)
110 PRK09848 glucuronide transport 99.2 3.4E-09 7.3E-14 109.2 23.6 312 56-406 42-381 (448)
111 PF03209 PUCC: PUCC protein; 99.2 3.5E-08 7.6E-13 96.9 28.9 317 63-407 20-357 (403)
112 COG2211 MelB Na+/melibiose sym 99.2 9.7E-09 2.1E-13 103.5 25.5 321 57-406 47-389 (467)
113 PRK11462 putative transporter; 99.2 1.1E-08 2.3E-13 105.8 26.5 115 56-170 43-166 (460)
114 TIGR01272 gluP glucose/galacto 99.2 2.2E-09 4.9E-14 104.8 19.7 233 111-379 7-259 (310)
115 KOG2325 Predicted transporter/ 99.2 4E-09 8.6E-14 106.5 20.8 152 19-173 26-188 (488)
116 PRK15462 dipeptide/tripeptide 99.1 1.2E-07 2.7E-12 97.6 29.2 116 56-173 43-161 (493)
117 TIGR00880 2_A_01_02 Multidrug 99.1 1.7E-09 3.7E-14 91.5 12.8 102 69-173 9-110 (141)
118 PF03825 Nuc_H_symport: Nucleo 99.0 3.7E-07 8.1E-12 92.2 28.5 315 56-409 35-360 (400)
119 PF05631 DUF791: Protein of un 99.0 1.9E-07 4.2E-12 90.3 24.6 217 66-298 77-304 (354)
120 PF03092 BT1: BT1 family; Int 99.0 3.7E-08 8.1E-13 100.7 20.2 362 75-458 41-431 (433)
121 PRK10642 proline/glycine betai 99.0 2.7E-08 5.9E-13 103.7 18.0 108 62-170 290-398 (490)
122 COG2807 CynX Cyanate permease 98.9 1.2E-07 2.6E-12 91.2 19.9 288 55-389 44-335 (395)
123 TIGR01299 synapt_SV2 synaptic 98.9 8.7E-09 1.9E-13 111.1 13.4 102 67-171 604-705 (742)
124 TIGR00889 2A0110 nucleoside tr 98.9 1.3E-08 2.8E-13 103.9 13.9 109 61-171 254-366 (418)
125 PF01306 LacY_symp: LacY proto 98.9 1.9E-07 4.1E-12 93.3 18.9 293 57-391 42-352 (412)
126 PRK15011 sugar efflux transpor 98.8 1.4E-07 3.1E-12 95.3 17.5 107 61-171 255-361 (393)
127 PRK05122 major facilitator sup 98.8 1.5E-07 3.3E-12 95.1 15.9 104 64-170 255-358 (399)
128 PRK11551 putative 3-hydroxyphe 98.8 1.2E-07 2.6E-12 96.1 15.0 110 59-171 256-365 (406)
129 PRK09528 lacY galactoside perm 98.8 7E-08 1.5E-12 98.5 12.4 107 61-170 265-372 (420)
130 PRK09874 drug efflux system pr 98.8 9.9E-08 2.2E-12 96.7 13.4 128 69-204 269-396 (408)
131 PRK10489 enterobactin exporter 98.7 3.2E-07 7E-12 93.5 16.8 109 60-171 261-369 (417)
132 cd06174 MFS The Major Facilita 98.7 1.8E-07 3.8E-12 92.0 14.3 114 57-173 210-324 (352)
133 TIGR00902 2A0127 phenyl propri 98.7 3.6E-07 7.8E-12 92.0 16.2 128 61-198 243-371 (382)
134 TIGR00899 2A0120 sugar efflux 98.7 5.3E-07 1.1E-11 90.1 16.1 98 70-171 247-344 (375)
135 TIGR00890 2A0111 Oxalate/Forma 98.6 2.7E-07 5.9E-12 91.8 12.4 108 61-171 243-352 (377)
136 PRK12382 putative transporter; 98.6 8.5E-07 1.8E-11 89.5 14.6 101 68-171 259-359 (392)
137 KOG2816 Predicted transporter 98.6 6.4E-06 1.4E-10 84.3 20.3 295 72-405 76-384 (463)
138 PRK09705 cynX putative cyanate 98.6 2E-06 4.4E-11 87.0 16.6 111 57-171 239-350 (393)
139 PRK10504 putative transporter; 98.6 1.8E-06 3.8E-11 89.5 16.0 102 69-170 308-409 (471)
140 PRK03545 putative arabinose tr 98.5 2.3E-06 4.9E-11 86.4 16.1 107 61-171 244-350 (390)
141 TIGR00883 2A0106 metabolite-pr 98.5 7.6E-07 1.6E-11 89.2 12.0 111 61-171 258-370 (394)
142 TIGR00898 2A0119 cation transp 98.5 3.5E-06 7.6E-11 88.1 16.4 100 71-171 368-467 (505)
143 COG3104 PTR2 Dipeptide/tripept 98.5 0.00015 3.3E-09 73.2 26.5 99 73-173 76-178 (498)
144 PRK03633 putative MFS family t 98.5 6.5E-06 1.4E-10 82.9 16.7 107 59-171 236-342 (381)
145 TIGR00895 2A0115 benzoate tran 98.4 1.6E-06 3.4E-11 87.1 12.0 110 58-170 285-394 (398)
146 PRK09952 shikimate transporter 98.4 6.3E-06 1.4E-10 84.6 16.4 103 71-173 299-403 (438)
147 PRK03893 putative sialic acid 98.4 1.9E-06 4.2E-11 89.8 12.4 114 57-171 310-423 (496)
148 PRK09556 uhpT sugar phosphate 98.4 4E-06 8.6E-11 86.9 14.5 113 57-170 293-406 (467)
149 TIGR00892 2A0113 monocarboxyla 98.4 1.7E-06 3.7E-11 89.3 11.4 113 57-170 275-389 (455)
150 PRK11663 regulatory protein Uh 98.4 5.5E-06 1.2E-10 85.0 14.9 113 57-170 278-393 (434)
151 TIGR00897 2A0118 polyol permea 98.4 6.9E-06 1.5E-10 83.3 15.4 137 62-205 261-400 (402)
152 TIGR00879 SP MFS transporter, 98.4 3.9E-06 8.4E-11 86.3 13.8 140 62-207 323-471 (481)
153 PRK12307 putative sialic acid 98.4 3.8E-06 8.2E-11 85.7 13.5 108 61-171 269-378 (426)
154 TIGR00900 2A0121 H+ Antiporter 98.4 2E-06 4.3E-11 85.3 11.0 107 61-170 250-357 (365)
155 PRK11128 putative 3-phenylprop 98.4 9.4E-06 2E-10 81.7 15.9 104 64-171 246-350 (382)
156 PF11700 ATG22: Vacuole efflux 98.4 1E-05 2.2E-10 83.5 15.9 107 67-173 326-439 (477)
157 PF07690 MFS_1: Major Facilita 98.4 1.4E-06 3.1E-11 85.9 8.9 107 61-167 246-352 (352)
158 TIGR00792 gph sugar (Glycoside 98.3 9.2E-06 2E-10 83.1 15.1 105 65-171 264-375 (437)
159 PRK11273 glpT sn-glycerol-3-ph 98.3 6.5E-06 1.4E-10 84.9 14.0 109 61-170 292-404 (452)
160 KOG3626 Organic anion transpor 98.3 4E-06 8.7E-11 88.5 12.2 58 116-173 239-296 (735)
161 PF03825 Nuc_H_symport: Nucleo 98.3 2.5E-05 5.4E-10 79.0 17.3 94 76-171 261-359 (400)
162 TIGR00893 2A0114 d-galactonate 98.3 1.3E-05 2.9E-10 80.0 14.9 111 60-171 253-368 (399)
163 PRK10077 xylE D-xylose transpo 98.3 1.3E-05 2.8E-10 83.1 15.2 104 67-170 315-420 (479)
164 PRK10406 alpha-ketoglutarate t 98.3 2.2E-05 4.8E-10 80.5 16.7 110 61-170 282-393 (432)
165 PRK14995 methyl viologen resis 98.3 8.6E-06 1.9E-10 85.1 13.6 116 56-171 293-408 (495)
166 PRK03699 putative transporter; 98.3 1.7E-05 3.6E-10 80.2 15.4 110 57-170 240-349 (394)
167 TIGR00891 2A0112 putative sial 98.3 8.2E-06 1.8E-10 82.2 13.0 112 60-173 276-387 (405)
168 TIGR02332 HpaX 4-hydroxyphenyl 98.3 5.3E-06 1.2E-10 84.5 11.0 113 270-408 41-153 (412)
169 PRK15075 citrate-proton sympor 98.3 2.1E-05 4.6E-10 80.6 15.4 105 66-170 282-388 (434)
170 TIGR00711 efflux_EmrB drug res 98.3 1.3E-05 2.7E-10 83.3 13.8 115 57-171 290-405 (485)
171 PF03137 OATP: Organic Anion T 98.2 2.4E-07 5.2E-12 96.9 -0.3 57 115-171 142-198 (539)
172 TIGR00710 efflux_Bcr_CflA drug 98.2 1.5E-05 3.3E-10 79.8 12.7 113 270-408 38-150 (385)
173 PRK11646 multidrug resistance 98.2 2.6E-05 5.7E-10 79.1 14.3 92 77-171 262-354 (400)
174 PRK09848 glucuronide transport 98.2 2.1E-05 4.4E-10 81.1 13.7 99 71-170 277-382 (448)
175 PRK09669 putative symporter Ya 98.2 1.7E-05 3.7E-10 81.6 13.0 101 69-170 275-382 (444)
176 TIGR00901 2A0125 AmpG-related 98.2 1.8E-05 3.9E-10 78.7 12.5 91 70-160 257-355 (356)
177 TIGR00882 2A0105 oligosacchari 98.2 3.9E-05 8.4E-10 77.6 15.1 105 63-170 259-364 (396)
178 PRK11010 ampG muropeptide tran 98.2 0.00011 2.3E-09 76.7 18.6 103 68-170 269-372 (491)
179 TIGR00712 glpT glycerol-3-phos 98.2 3.9E-05 8.4E-10 78.8 15.0 116 268-405 57-172 (438)
180 PRK15402 multidrug efflux syst 98.2 5.7E-05 1.2E-09 76.6 16.1 105 65-170 258-364 (406)
181 PF13347 MFS_2: MFS/sugar tran 98.2 2.3E-05 5E-10 80.2 12.8 107 64-171 266-379 (428)
182 PF05977 MFS_3: Transmembrane 98.1 5.7E-05 1.2E-09 78.9 15.6 103 66-171 262-364 (524)
183 PLN00028 nitrate transmembrane 98.1 2.4E-05 5.2E-10 81.3 12.5 147 57-210 287-437 (476)
184 PRK11102 bicyclomycin/multidru 98.1 1.6E-05 3.4E-10 79.7 10.2 113 270-408 24-136 (377)
185 PRK10054 putative transporter; 98.1 7.1E-05 1.5E-09 75.8 14.8 94 75-171 261-354 (395)
186 PRK10473 multidrug efflux syst 98.1 3.8E-05 8.2E-10 77.5 12.1 109 273-407 39-147 (392)
187 TIGR00880 2_A_01_02 Multidrug 98.1 1.6E-05 3.6E-10 66.7 7.9 104 280-409 6-109 (141)
188 KOG4686 Predicted sugar transp 98.1 9.7E-05 2.1E-09 68.9 13.3 147 21-171 261-409 (459)
189 TIGR00887 2A0109 phosphate:H+ 98.1 9.6E-05 2.1E-09 77.3 15.3 99 72-170 349-448 (502)
190 COG2270 Permeases of the major 98.0 4.4E-05 9.6E-10 75.4 11.7 100 68-170 298-397 (438)
191 TIGR00896 CynX cyanate transpo 98.0 8E-05 1.7E-09 74.0 14.0 110 57-170 231-342 (355)
192 TIGR01301 GPH_sucrose GPH fami 98.0 8.9E-05 1.9E-09 76.3 14.3 169 270-445 37-224 (477)
193 KOG3764 Vesicular amine transp 98.0 1.6E-05 3.4E-10 77.6 8.0 148 273-446 107-254 (464)
194 TIGR02718 sider_RhtX_FptX side 98.0 0.0002 4.4E-09 72.2 15.6 102 70-171 256-361 (390)
195 KOG0253 Synaptic vesicle trans 98.0 2.5E-05 5.4E-10 75.5 8.2 94 72-170 395-490 (528)
196 COG2271 UhpC Sugar phosphate p 98.0 1.4E-05 3.1E-10 78.7 6.7 113 269-407 61-173 (448)
197 KOG1330 Sugar transporter/spin 98.0 3.8E-06 8.2E-11 83.5 2.6 115 270-410 66-180 (493)
198 PRK15403 multidrug efflux syst 98.0 4.4E-05 9.5E-10 77.8 10.5 110 273-408 52-161 (413)
199 PRK08633 2-acyl-glycerophospho 98.0 8.8E-05 1.9E-09 85.6 14.0 109 60-171 271-379 (1146)
200 PRK11043 putative transporter; 97.9 0.00031 6.7E-09 71.1 16.4 105 68-173 248-354 (401)
201 PRK10429 melibiose:sodium symp 97.9 0.00023 5.1E-09 73.8 15.7 102 69-170 277-387 (473)
202 COG2211 MelB Na+/melibiose sym 97.9 0.00055 1.2E-08 69.5 17.4 148 22-170 234-390 (467)
203 PF01770 Folate_carrier: Reduc 97.9 0.0085 1.9E-07 60.0 25.4 130 74-210 57-186 (412)
204 TIGR00881 2A0104 phosphoglycer 97.9 7.1E-05 1.5E-09 74.4 11.1 114 57-170 251-366 (379)
205 PF01306 LacY_symp: LacY proto 97.9 0.00011 2.5E-09 73.5 12.2 137 63-207 264-401 (412)
206 COG2814 AraJ Arabinose efflux 97.9 0.00055 1.2E-08 68.1 16.5 97 71-171 260-356 (394)
207 PRK10091 MFS transport protein 97.9 0.00029 6.3E-09 70.9 14.8 110 57-170 234-344 (382)
208 PF06813 Nodulin-like: Nodulin 97.9 0.00033 7.2E-09 65.6 13.8 95 75-170 53-151 (250)
209 PRK11652 emrD multidrug resist 97.8 0.0001 2.2E-09 74.4 10.8 111 270-406 41-151 (394)
210 TIGR01272 gluP glucose/galacto 97.8 0.00067 1.5E-08 66.3 15.4 109 56-170 176-284 (310)
211 PRK11195 lysophospholipid tran 97.8 0.0005 1.1E-08 69.5 14.9 111 57-171 240-351 (393)
212 TIGR00894 2A0114euk Na(+)-depe 97.8 4.5E-05 9.7E-10 78.9 6.5 113 272-408 76-188 (465)
213 PRK10213 nepI ribonucleoside t 97.7 0.0011 2.5E-08 66.9 16.6 100 69-172 263-362 (394)
214 TIGR00885 fucP L-fucose:H+ sym 97.7 0.00044 9.6E-09 70.4 13.5 116 270-408 36-151 (410)
215 PRK06814 acylglycerophosphoeth 97.7 0.00028 6.1E-09 81.4 13.3 117 57-173 260-393 (1140)
216 KOG0569 Permease of the major 97.7 0.00046 1E-08 70.7 13.3 136 69-210 316-458 (485)
217 PRK11902 ampG muropeptide tran 97.7 0.0009 1.9E-08 67.8 15.2 97 70-170 258-359 (402)
218 COG0477 ProP Permeases of the 97.7 0.00031 6.8E-09 66.7 11.1 109 60-171 41-153 (338)
219 KOG3762 Predicted transporter 97.7 0.00024 5.3E-09 72.0 10.2 94 74-170 422-516 (618)
220 TIGR00788 fbt folate/biopterin 97.6 0.00046 9.9E-09 71.6 12.0 117 57-173 287-410 (468)
221 KOG2615 Permease of the major 97.6 8E-05 1.7E-09 72.4 5.7 155 274-462 70-236 (451)
222 KOG4332 Predicted sugar transp 97.6 0.0038 8.2E-08 58.1 16.0 71 74-150 88-159 (454)
223 TIGR00886 2A0108 nitrite extru 97.6 0.00027 5.8E-09 70.3 9.6 112 270-408 35-147 (366)
224 PRK11462 putative transporter; 97.6 0.0011 2.3E-08 68.7 14.1 102 68-170 273-381 (460)
225 PRK15034 nitrate/nitrite trans 97.6 0.0011 2.3E-08 68.1 13.7 118 269-408 67-184 (462)
226 PRK09584 tppB putative tripept 97.5 0.00058 1.3E-08 71.4 10.9 98 73-170 335-438 (500)
227 TIGR00903 2A0129 major facilit 97.5 0.0026 5.6E-08 63.7 14.2 62 112-173 278-339 (368)
228 PRK10207 dipeptide/tripeptide 97.5 0.0011 2.4E-08 69.0 11.8 100 72-171 323-436 (489)
229 PRK15462 dipeptide/tripeptide 97.4 0.00064 1.4E-08 70.4 9.7 117 269-409 42-160 (493)
230 PRK10133 L-fucose transporter; 97.4 0.0057 1.2E-07 62.8 16.6 110 55-170 292-401 (438)
231 COG2807 CynX Cyanate permease 97.4 0.0054 1.2E-07 59.7 14.5 163 4-170 188-353 (395)
232 TIGR00924 yjdL_sub1_fam amino 97.3 0.002 4.2E-08 67.0 11.5 60 112-171 379-438 (475)
233 TIGR00805 oat sodium-independe 97.3 0.0022 4.9E-08 68.9 11.6 133 272-408 68-229 (633)
234 TIGR00769 AAA ADP/ATP carrier 97.2 0.084 1.8E-06 54.4 22.4 147 28-174 8-189 (472)
235 PTZ00207 hypothetical protein; 97.2 0.0045 9.8E-08 65.4 13.4 94 288-402 77-170 (591)
236 KOG2504 Monocarboxylate transp 97.2 0.0033 7.2E-08 65.5 12.1 112 56-170 331-444 (509)
237 KOG2533 Permease of the major 97.2 0.0052 1.1E-07 63.6 12.8 153 275-453 84-241 (495)
238 PF03209 PUCC: PUCC protein; 97.0 0.026 5.6E-07 56.1 15.7 96 76-171 262-358 (403)
239 COG2223 NarK Nitrate/nitrite t 97.0 0.0016 3.5E-08 64.5 6.8 153 268-445 45-199 (417)
240 PF06813 Nodulin-like: Nodulin 96.8 0.015 3.2E-07 54.6 11.3 117 270-407 35-151 (250)
241 PF00083 Sugar_tr: Sugar (and 96.8 7.3E-05 1.6E-09 76.9 -5.0 111 275-408 49-159 (451)
242 KOG0254 Predicted transporter 96.8 0.0062 1.4E-07 63.9 9.5 109 275-409 92-200 (513)
243 TIGR00806 rfc RFC reduced fola 96.8 0.027 5.8E-07 57.6 13.4 115 268-409 57-172 (511)
244 PF06609 TRI12: Fungal trichot 96.7 0.019 4.1E-07 60.6 12.5 103 69-172 360-463 (599)
245 KOG0255 Synaptic vesicle trans 96.7 0.062 1.3E-06 56.5 16.3 98 74-172 366-464 (521)
246 KOG0252 Inorganic phosphate tr 96.6 0.0099 2.1E-07 59.6 9.0 95 74-169 364-461 (538)
247 PF02487 CLN3: CLN3 protein; 96.6 0.48 1E-05 47.6 20.6 88 75-170 76-163 (402)
248 KOG2325 Predicted transporter/ 96.4 0.025 5.5E-07 57.8 10.5 154 274-449 73-239 (488)
249 PF05631 DUF791: Protein of un 96.3 0.065 1.4E-06 52.5 12.4 39 266-306 63-101 (354)
250 TIGR00926 2A1704 Peptide:H+ sy 96.1 0.069 1.5E-06 57.5 12.8 103 68-170 33-144 (654)
251 PF03219 TLC: TLC ATP/ADP tran 96.1 1.7 3.6E-05 45.2 22.3 152 23-174 20-204 (491)
252 COG0738 FucP Fucose permease [ 95.9 0.078 1.7E-06 52.6 10.7 112 273-407 49-160 (422)
253 KOG0637 Sucrose transporter an 95.9 0.17 3.8E-06 50.9 13.1 96 73-170 82-199 (498)
254 COG3104 PTR2 Dipeptide/tripept 95.7 0.013 2.8E-07 59.5 4.7 123 287-433 76-200 (498)
255 KOG3574 Acetyl-CoA transporter 95.4 3.1 6.7E-05 41.3 20.3 93 76-169 81-188 (510)
256 PF13000 Acatn: Acetyl-coenzym 95.2 4.4 9.6E-05 41.7 21.2 70 227-296 264-337 (544)
257 KOG2532 Permease of the major 95.2 0.013 2.7E-07 60.5 2.6 116 270-409 71-186 (466)
258 KOG0637 Sucrose transporter an 95.1 0.074 1.6E-06 53.5 7.7 121 282-409 77-201 (498)
259 TIGR00939 2a57 Equilibrative N 94.9 0.35 7.5E-06 49.6 12.2 62 112-173 370-431 (437)
260 PF00854 PTR2: POT family; In 93.8 0.28 6.2E-06 49.1 8.8 82 89-170 2-92 (372)
261 COG3202 ATP/ADP translocase [E 93.2 12 0.00025 38.6 21.6 154 22-175 22-209 (509)
262 KOG3810 Micronutrient transpor 92.8 4.5 9.8E-05 39.7 14.5 125 78-209 62-186 (433)
263 PF06963 FPN1: Ferroportin1 (F 92.6 14 0.0003 37.9 24.0 125 268-408 289-413 (432)
264 PF12832 MFS_1_like: MFS_1 lik 92.3 0.77 1.7E-05 34.5 7.0 43 55-97 32-74 (77)
265 KOG2563 Permease of the major 91.1 0.99 2.2E-05 45.6 8.2 40 273-314 80-119 (480)
266 PF03092 BT1: BT1 family; Int 91.0 1.4 3E-05 45.2 9.8 102 73-174 270-378 (433)
267 KOG2816 Predicted transporter 88.7 4.9 0.00011 41.5 11.4 100 66-169 285-385 (463)
268 PF02487 CLN3: CLN3 protein; 88.3 11 0.00024 38.0 13.3 62 111-172 332-393 (402)
269 PF03137 OATP: Organic Anion T 85.6 0.21 4.5E-06 52.7 -0.5 137 267-408 31-198 (539)
270 PF07672 MFS_Mycoplasma: Mycop 84.3 9.4 0.0002 35.9 9.7 29 276-305 145-173 (267)
271 KOG3762 Predicted transporter 84.2 18 0.00039 37.8 12.4 45 56-100 44-88 (618)
272 PF01733 Nucleoside_tran: Nucl 83.2 0.41 8.9E-06 46.6 0.4 61 112-172 246-306 (309)
273 TIGR00926 2A1704 Peptide:H+ sy 82.6 5.6 0.00012 43.1 8.7 114 278-408 30-145 (654)
274 PF12832 MFS_1_like: MFS_1 lik 82.1 2 4.3E-05 32.3 3.6 40 267-308 30-69 (77)
275 KOG3098 Uncharacterized conser 81.4 10 0.00022 38.9 9.6 92 74-166 295-404 (461)
276 PF06963 FPN1: Ferroportin1 (F 80.6 22 0.00048 36.3 11.7 98 72-170 307-412 (432)
277 TIGR00939 2a57 Equilibrative N 79.8 77 0.0017 32.5 25.5 52 114-170 106-157 (437)
278 PRK03612 spermidine synthase; 79.0 41 0.0009 35.4 13.5 111 59-170 51-165 (521)
279 KOG1237 H+/oligopeptide sympor 77.9 34 0.00074 36.4 12.5 102 69-170 84-214 (571)
280 PF06779 DUF1228: Protein of u 77.0 8.8 0.00019 29.4 5.8 55 46-100 15-69 (85)
281 KOG1479 Nucleoside transporter 75.5 19 0.00041 36.3 9.2 61 112-172 341-401 (406)
282 PF05978 UNC-93: Ion channel r 74.7 28 0.0006 30.1 9.0 88 281-395 46-133 (156)
283 PF07672 MFS_Mycoplasma: Mycop 68.6 42 0.00092 31.6 9.2 92 64-158 147-250 (267)
284 PF10951 DUF2776: Protein of u 60.6 8.4 0.00018 36.3 3.0 49 80-131 285-333 (347)
285 PF06779 DUF1228: Protein of u 52.7 15 0.00033 28.1 2.8 44 268-313 23-66 (85)
286 KOG3626 Organic anion transpor 51.8 42 0.00091 36.6 6.9 56 352-408 239-294 (735)
287 COG0477 ProP Permeases of the 50.4 1.5E+02 0.0033 27.0 10.2 108 274-404 41-149 (338)
288 PF00854 PTR2: POT family; In 47.7 67 0.0015 31.9 7.5 58 352-409 35-94 (372)
289 KOG1479 Nucleoside transporter 39.9 4.2E+02 0.009 26.9 20.4 33 114-147 117-149 (406)
290 PF11947 DUF3464: Protein of u 37.7 1.7E+02 0.0036 25.2 7.1 83 80-165 56-145 (153)
291 TIGR00769 AAA ADP/ATP carrier 36.2 5.2E+02 0.011 26.9 15.3 49 356-405 134-183 (472)
292 KOG1237 H+/oligopeptide sympor 34.8 1.2E+02 0.0026 32.3 7.3 59 113-171 457-515 (571)
293 KOG3810 Micronutrient transpor 24.6 1.1E+02 0.0023 30.5 4.2 91 64-155 277-367 (433)
294 KOG3880 Predicted small molecu 24.0 2.2E+02 0.0048 27.9 6.1 61 111-171 339-399 (409)
295 COG5336 Uncharacterized protei 23.3 71 0.0015 25.5 2.3 21 290-311 60-80 (116)
296 PF01770 Folate_carrier: Reduc 21.8 2.8E+02 0.0062 28.2 6.8 92 62-154 289-380 (412)
297 COG4810 EutS Ethanolamine util 21.4 18 0.00039 28.2 -1.3 19 440-458 10-29 (121)
298 CHL00031 psbT photosystem II p 20.1 1.9E+02 0.0041 17.7 3.1 11 201-211 19-29 (33)
No 1
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.97 E-value=9.5e-30 Score=253.59 Aligned_cols=368 Identities=23% Similarity=0.360 Sum_probs=259.6
Q ss_pred cchhHHHHHHHHHHhhhhhhhHhhhhcC--------C--CCCCChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHH
Q 012075 23 NSPLVQVCLIGLVCFCCPGMFNALSGMG--------G--GGQVDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLI 92 (471)
Q Consensus 23 ~~~~~~~~~~~~~~f~~~~~~~~~~~l~--------~--~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~ 92 (471)
+....++..+++..++.+.++...+..+ . .+..+++.+..+++++|..+.++|+++|++.|+.|.|+.|+
T Consensus 5 ~~~~~~v~~lg~g~~~~f~~~~s~~fi~esvi~sv~~~~~g~i~~~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv 84 (461)
T KOG3098|consen 5 RFELLNVLMLGFGFLFLFTAYDSQGFIAESVIHSVHERGPGGISAYAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALV 84 (461)
T ss_pred cchhheeeehhhhHHHHhHhhhhhHHHHHHHHHHHHhcCCCCcCCCccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHH
Confidence 4455677888887776665554322111 1 13456677888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHH
Q 012075 93 SACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFI 172 (471)
Q Consensus 93 i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~ 172 (471)
+++.+|..|.+++++ .|.+.++++..+.|+|.+..|+.++.|++|++++|++.+++++.|+....+.++|+++.+.
T Consensus 85 ~ga~~y~~f~~gfl~----~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 85 IGATCYAAFPLGFLF----PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFI 160 (461)
T ss_pred HHhHHHHHHHHHHHh----cchHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhhee
Confidence 999999999999887 6899999999999999999999999999999999999999999999999999999988755
Q ss_pred hhccCCCccccccch--------hHHHHHHHHHHHHHHHhc-------cCCCccccCCCCccccccCCCHHHHHHHHHHH
Q 012075 173 LNYNRNEAVSVNDGT--------YIGFMCFMSAGALLSLVI-------LPPGRVIRDDGTHCTNIKYSNVSTEITQVLKL 237 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~~l-------~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 237 (471)
+....+......... +..+.+......+..... ..|.+. ...+.+.. +++..++++...+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~---~~~~~~~~-~~~~~~~l~~~~~l 236 (461)
T KOG3098|consen 161 YFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKD---VVNCKSSS-ETSFSELLKLTFKL 236 (461)
T ss_pred eeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccc---hhhhhhhc-cccHHHHHHHHHHH
Confidence 443322111100000 122222222222221111 112110 00011111 14678888999999
Q ss_pred hcchhHHHHHHHHHHhHhHhhhcc---cccccc--cc--c-cchhhhHHHHHHHHHHHHhhhhhhhcccC-CCCccceee
Q 012075 238 FSNWKMLLIFPASWASNFFYSYQF---NNVNGL--QF--N-LRTRGLNNVFYWGAQMLGSVGIGYIFDFS-FPTRRKRGF 308 (471)
Q Consensus 238 ~~~~~~ll~~~~~~~~~~~~s~~~---~~~~~~--~~--~-~~~~~l~~~~~~i~~i~g~~~~g~l~D~~-~~gRr~~~~ 308 (471)
+++|+++++.|.++++|+..++.. ++.... .. + ....++..++.++++++++...+.+.||. +.||++...
T Consensus 237 ~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~ 316 (461)
T KOG3098|consen 237 LKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVL 316 (461)
T ss_pred hcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchh
Confidence 999999999999999987555443 333211 11 1 11345667889999999999999999885 689999888
Q ss_pred ehhhhHHHHHHHHHHhHhhhhcccCCCCC--C-C--ccCCCCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCch
Q 012075 309 VGIVVVALLGSAIWAGGLANQLNYSHDKP--P-A--KLDFKNSGSDFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSE 383 (471)
Q Consensus 309 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 383 (471)
++..++.....+.. ..++.+.| | + ..++. +.+....++.+++|+.|++++++.+++++..+++
T Consensus 317 ~~~~~~~~~~~li~-------l~~p~dap~~~t~~~~~~~~---~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~-- 384 (461)
T KOG3098|consen 317 IGIIIHLIGFLLIH-------LSFPNDAPLRPTDSPPLLFT---PSYYLALIIGFLLGFGDACFNTQRYVIIALLYPD-- 384 (461)
T ss_pred HHHHHHHHHHHHHh-------ccccccCCCCCCcccccccc---cchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcC--
Confidence 77766632222221 22232221 0 0 11222 4566789999999999999999999999999944
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhcccC
Q 012075 384 TLSRYSGFYKGVQSAGAAVAWQVDTHK 410 (471)
Q Consensus 384 ~~~~~~~~~~~~~s~g~~i~~~~~~~~ 410 (471)
++.++++++|+.|++++++.++..+..
T Consensus 385 ~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 385 DRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 347899999999999999988877643
No 2
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=3.6e-25 Score=222.93 Aligned_cols=358 Identities=15% Similarity=0.146 Sum_probs=211.9
Q ss_pred hHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhc
Q 012075 61 NNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMT 140 (471)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~ 140 (471)
+..++..+.+..+|+++.++++|++|||.+++++.+...+...........++.++++++|++.|+..|......+.|+.
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~ 142 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLT 142 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 44566778888899999999999999999999999876654433443334678899999999999999999999999999
Q ss_pred cCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccC--CCccc--cCCC
Q 012075 141 SYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILP--PGRVI--RDDG 216 (471)
Q Consensus 141 ~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~--p~~~~--r~~~ 216 (471)
|++|++.||....+.+....+|.++|..++.--.. ++.. .|.....+..+.++..++.+++.| |+++- |.|+
T Consensus 143 E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~il--Gt~~--~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~ 218 (485)
T KOG0569|consen 143 EISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLL--GTED--LWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDE 218 (485)
T ss_pred hcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhc--CCCc--chHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCH
Confidence 99999999999999999999999999777632111 1111 122222222233333333444455 55531 2221
Q ss_pred Ccc--c------ccc-CCCH---HHHH----------HHHHHHhcch----hHHHHHHHHHHhHhH---hhhcccc-c-c
Q 012075 217 THC--T------NIK-YSNV---STEI----------TQVLKLFSNW----KMLLIFPASWASNFF---YSYQFNN-V-N 265 (471)
Q Consensus 217 ~~~--~------~~~-~~~~---~~~~----------~~~~~~~~~~----~~ll~~~~~~~~~~~---~s~~~~~-~-~ 265 (471)
++. . .++ ++.. .++. .+.++.+++| .+.+.+...+.+++. --..|++ + .
T Consensus 219 ~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~ 298 (485)
T KOG0569|consen 219 EEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFK 298 (485)
T ss_pred HHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHH
Confidence 110 0 000 0000 0000 0122223322 222222222223220 0011111 1 1
Q ss_pred ccccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCC
Q 012075 266 GLQFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKN 345 (471)
Q Consensus 266 ~~~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (471)
..+++.......+...++.+++.++++.++.|| .|||++++.+..++.+..+++... ..+..... +|
T Consensus 299 ~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~--~gRRpLll~~~~~~~~~~~~~~~~-~~l~~~~~--------~~-- 365 (485)
T KOG0569|consen 299 TAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDR--LGRRPLLLISLSLMAVALLLMSIA-LFLSNSFG--------SW-- 365 (485)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhh--------hH--
Confidence 234555556678888999999999999999999 899999999887775444333321 11111000 12
Q ss_pred CCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CchhhhHHHHHHHHHHHHHHHHHhhhccc---CchhhHH-HH-H
Q 012075 346 SGSDFAGPFVLYFCYGLLDAMFQSMVYWVIGALAD-DSETLSRYSGFYKGVQSAGAAVAWQVDTH---KVSLLSQ-LV-V 419 (471)
Q Consensus 346 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~s~g~~i~~~~~~~---~~p~~~~-~~-~ 419 (471)
..|..+..++.+...+..+-.|+.|-+.+|+++ ++| ..+ ++.+.+++|..+-. ..|++.. ++ -
T Consensus 366 --~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R--~aa-------~s~~~~~~w~~~fiv~~~fp~l~~~~g~~ 434 (485)
T KOG0569|consen 366 --LSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSAR--SAA-------QSVATAVNWLSNFIVGFAFPPLQNVIGPY 434 (485)
T ss_pred --HHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccch--HHH-------HHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 123333444444444555556777777899993 333 444 35666667766532 2444333 33 2
Q ss_pred HHHHHHhhhhhhhheeeeeeccCCCcc
Q 012075 420 NWSLTTISYPLLVILVLLAVKDEKSPE 446 (471)
Q Consensus 420 ~~~~~~~~~~~~i~~~~~~~pet~~~~ 446 (471)
.+.+|.+.+.....+.|+++||||.++
T Consensus 435 ~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 435 VFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred hhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 334555555566677899999997553
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.91 E-value=7.7e-23 Score=218.49 Aligned_cols=115 Identities=14% Similarity=0.233 Sum_probs=98.3
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++...+...++.+++..++++++|+++||+|||++++++.+++.++.... +.+++.+.++++|++.|++.|...+..
T Consensus 200 s~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~---afa~s~~~llv~R~l~G~g~g~~~p~~ 276 (742)
T TIGR01299 200 PDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFS---SFVQGYGFFLFCRLLSGFGIGGAIPIV 276 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566777888889999999999999999999999988776643322 235789999999999999999999999
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
..+++|++|+++||+.++++++...+|.++++.++..+
T Consensus 277 ~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~i 314 (742)
T TIGR01299 277 FSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAI 314 (742)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999876544
No 4
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.91 E-value=1.4e-22 Score=211.90 Aligned_cols=358 Identities=15% Similarity=0.145 Sum_probs=209.6
Q ss_pred hHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhc
Q 012075 61 NNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMT 140 (471)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~ 140 (471)
+...+..+++.+++++++|+++|++|||++++++.+.|.+..... +.++|.++++++|++.|+|.|......+.|++
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~---~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIII---ALAPSWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH---HHhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 455667778888999999999999999999999999887743333 34789999999999999999999999999999
Q ss_pred cCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccC--CCccccCC---
Q 012075 141 SYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILP--PGRVIRDD--- 215 (471)
Q Consensus 141 ~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~--p~~~~r~~--- 215 (471)
|++|++.||...+.++....+|..+|.++++..... . +.|+.......+.++...+.+++.| |+++-|+.
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~---~--~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~ 243 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKV---Y--AGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLE 243 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC---C--ccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChH
Confidence 999999999999999999999999997777544211 0 2344333333333333333344444 55543311
Q ss_pred CCccc----cc-cCCCHHHHH---H-----H--------HHHHh----cchhHHHHHHHHHHhHhH----hhhccccccc
Q 012075 216 GTHCT----NI-KYSNVSTEI---T-----Q--------VLKLF----SNWKMLLIFPASWASNFF----YSYQFNNVNG 266 (471)
Q Consensus 216 ~~~~~----~~-~~~~~~~~~---~-----~--------~~~~~----~~~~~ll~~~~~~~~~~~----~s~~~~~~~~ 266 (471)
+++.. .. ++.+..+++ + + .++.+ .+++......+..++++. ..++.+++..
T Consensus 244 ~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~ 323 (513)
T KOG0254|consen 244 EAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFK 323 (513)
T ss_pred HHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHH
Confidence 11100 00 011111111 0 0 01111 112233333333344431 0011011111
Q ss_pred -cccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCC
Q 012075 267 -LQFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKN 345 (471)
Q Consensus 267 -~~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (471)
.+++... ....+..++.+++++.+..++.|| +|||++++.|...|.++.. +.+.......... . ....
T Consensus 324 ~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~--~gRr~lll~s~~~m~~~~~-~~~~~~~~~~~~~----~---~~~~ 392 (513)
T KOG0254|consen 324 SAGLKSDT-FLASIILGVVNFLGTLVATYLVDR--FGRRKLLLFGAAGMSICLV-ILAVVGVFALYYP----N---SSKG 392 (513)
T ss_pred hcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHH--hccHHHHHHhHHHHHHHHH-HHHHHHHHhccCC----C---cccc
Confidence 1222111 556778899999999998999999 7999999999888844333 3222221110000 0 0011
Q ss_pred CCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CchhhhHHHHHHHHHHHHHHHHHhhhccc---CchhhHHH---H
Q 012075 346 SGSDFAGPFVLYFCYGLLDAMFQSMVYWVIGALAD-DSETLSRYSGFYKGVQSAGAAVAWQVDTH---KVSLLSQL---V 418 (471)
Q Consensus 346 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~s~g~~i~~~~~~~---~~p~~~~~---~ 418 (471)
..+.....+.++...+..++.+..|.+.+|+++ +.| +++. +++.+++|..+.. ..+.+... +
T Consensus 393 --~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r--~~~~-------s~~~~~n~~~~~~v~~~~~~~~~~~~~~ 461 (513)
T KOG0254|consen 393 --AGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLR--SKGA-------SLAVAVNWLWNFLISFFFPFITEALGIG 461 (513)
T ss_pred --hhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHH--hhhH-------HHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 233344555666667777777777777899993 333 3333 4455555554421 12222211 2
Q ss_pred HHHHHHHh-hhhhhhheeeeeeccCCCccCc
Q 012075 419 VNWSLTTI-SYPLLVILVLLAVKDEKSPEES 448 (471)
Q Consensus 419 ~~~~~~~~-~~~~~i~~~~~~~pet~~~~~~ 448 (471)
..+.++.. +.+..+.++++++|||++...+
T Consensus 462 ~~f~~f~~~~~~~~~~fv~~~~pETkg~sle 492 (513)
T KOG0254|consen 462 GTFGYFGGICLLSLIIFVFFFVPETKGLTLE 492 (513)
T ss_pred chHHHHHHHHHHHHHHHheEEcccCCCCcHH
Confidence 34444444 3334443789999999766333
No 5
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.90 E-value=8.7e-22 Score=205.53 Aligned_cols=112 Identities=13% Similarity=0.131 Sum_probs=93.9
Q ss_pred hhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccc------hHHHHHHHHHHhhhhhHHH
Q 012075 59 AANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKH------QAFAIAAGAILGIGAGLLW 132 (471)
Q Consensus 59 ~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~------~~~li~~r~l~G~g~g~~~ 132 (471)
..+...+....+..++++++|+++||+|||+.+.++.+++.+....... +++ .+.++++|++.|++.|...
T Consensus 57 ~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~~~r~l~G~~~g~~~ 133 (502)
T TIGR00887 57 VSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGL---SPGSSPKSVMATLCFWRFWLGVGIGGDY 133 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH---ccCcccchHHHHHHHHHHHHHHHHhhhh
Confidence 3345566677778899999999999999999999998887764332222 333 6789999999999999999
Q ss_pred hhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 133 AAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 133 ~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
+..+.|++|++|+++||+.+++++....+|.++|+.++..+
T Consensus 134 ~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~ 174 (502)
T TIGR00887 134 PLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIV 174 (502)
T ss_pred HHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999887443
No 6
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.90 E-value=6.5e-22 Score=205.80 Aligned_cols=303 Identities=12% Similarity=0.036 Sum_probs=168.4
Q ss_pred HHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHH--------HHHHHHHHhhhhhHHHhhh
Q 012075 64 NTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAF--------AIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 64 ~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~--------li~~r~l~G~g~g~~~~~~ 135 (471)
.+..+.+..+++++.|+++||+|||+++.++.+++.+..... +.++|++. ++++|+++|+|.|..++..
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~---a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~ 139 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCI---GLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGA 139 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH---HhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHH
Confidence 366778889999999999999999999999999887744333 34677764 8999999999999999999
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCC----CccccccchhHHHHHHHHHHHHHHHhccC--CC
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRN----EAVSVNDGTYIGFMCFMSAGALLSLVILP--PG 209 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~l~~--p~ 209 (471)
..+++|++|+++||+..++......+|..+|+.+...+..... ...+||+.+++ ...+.++..++ ....| |+
T Consensus 140 ~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i-~~~~~l~~~~~-~~~~~esp~ 217 (490)
T PRK10642 140 SIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFI-ALPLGIIGLYL-RHALEETPA 217 (490)
T ss_pred HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHH-HHHHHHHHHHH-HHcCCCChh
Confidence 9999999999999999999998888888888866532211000 01345544332 22222222222 12223 22
Q ss_pred ccccCCCCcc--ccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHh-Hhh--hcccccccc--ccccchhhhHHHHHH
Q 012075 210 RVIRDDGTHC--TNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNF-FYS--YQFNNVNGL--QFNLRTRGLNNVFYW 282 (471)
Q Consensus 210 ~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~-~~s--~~~~~~~~~--~~~~~~~~l~~~~~~ 282 (471)
+.+++++.+. .+..++..+..+++.++. ..++++......+.... ++. ..++++... +++.....+......
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~ 296 (490)
T PRK10642 218 FQQHVDKLEQGDREGLQDGPKVSFKEIATK-HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIM 296 (490)
T ss_pred HHHHHHhhhhhccccccccccCCHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 2111110000 000000000112223221 11222222222221111 111 112444322 233333445556677
Q ss_pred HHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHh
Q 012075 283 GAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGL 362 (471)
Q Consensus 283 i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 362 (471)
++.+++.++.|++.|| +|||+....+.+...+.....+. .. . . .......+..++.++
T Consensus 297 ~~~~~~~~~~g~l~dr--~grr~~~~~~~~~~~~~~~~~~~-----~~--~-----------~--~~~~~~~~~~~~~g~ 354 (490)
T PRK10642 297 IGMLFVQPVMGLLSDR--FGRRPFVILGSVALFVLAIPAFI-----LI--N-----------S--NVIGLIFAGLLMLAV 354 (490)
T ss_pred HHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHHH-----HH--h-----------C--CCHHHHHHHHHHHHH
Confidence 8888999999999999 89998665554322111111110 00 0 0 112223334444555
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHH
Q 012075 363 LDAMFQSMVYWVIGALADDSETLSRYSGFYKGV 395 (471)
Q Consensus 363 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 395 (471)
..+...+....+++|++++ +.+++++++...+
T Consensus 355 ~~~~~~g~~~~~~~~~~p~-~~Rg~~~g~~~~~ 386 (490)
T PRK10642 355 ILNCFTGVMASTLPAMFPT-HIRYSALAAAFNI 386 (490)
T ss_pred HHHHHHHHHHHHHHHHCCC-ccchHHHHHHHHH
Confidence 5555556666778888843 3447777764433
No 7
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.89 E-value=3.2e-21 Score=195.68 Aligned_cols=314 Identities=17% Similarity=0.141 Sum_probs=190.4
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++...+...+....+..++++++|+++||+|||+.+.++.++..+..... ..+++.+.+++.|++.|++.+...+..
T Consensus 48 s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~G~~~~~~~~~~ 124 (406)
T PRK11551 48 DVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLAT---AQAWDFPSLLVARLLTGVGLGGALPNL 124 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH---HHhccHHHHHHHHHHHHhhHHHHHHHH
Confidence 45555666777778888899999999999999999999987765533222 336889999999999999999998888
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCC
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDD 215 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~ 215 (471)
..++.|..|+++||+.+++++....+|..+++.++.... . ..+|++. +++..++.++..++..++.|+++..+++
T Consensus 125 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~-~---~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 199 (406)
T PRK11551 125 IALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAA-G---DAAWRHI-FYVGGVGPLLLVPLLMRWLPESRAFAQA 199 (406)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-c---ccCHHHH-HHHHHHHHHHHHHHHHHhCCCChhHHhc
Confidence 999999999999999999999999999999998874332 1 1234433 3232222232222233333322111111
Q ss_pred CCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHh--Hh--Hhhhccccccc-cccccchhhhHHHHHHHHHHHHhh
Q 012075 216 GTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWAS--NF--FYSYQFNNVNG-LQFNLRTRGLNNVFYWGAQMLGSV 290 (471)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~--~~--~~s~~~~~~~~-~~~~~~~~~l~~~~~~i~~i~g~~ 290 (471)
+.+ .+++++.. +..++..+.++........+.. .. ...+. +.+.. .+++....++.....+++.+++.+
T Consensus 200 ~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~ 273 (406)
T PRK11551 200 AGA--GKQRAPVL---RALFGEGRATATLLLWISYFFTLIVLYFLLNWL-PSLLVGQGLSRSQAGLVQIAFNIGGALGSL 273 (406)
T ss_pred cCc--chhhhhhH---HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCChhhhhHHHHHHHHHHHHHHH
Confidence 000 00111111 1111111112222111111111 11 11111 23322 234444566777778899999999
Q ss_pred hhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHH
Q 012075 291 GIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSM 370 (471)
Q Consensus 291 ~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 370 (471)
+.|++.|| +|||+....+...+. +.... .. +. ++.....+..++.+++..+.++.
T Consensus 274 ~~g~l~dr--~g~~~~~~~~~~~~~-~~~~~----~~----~~--------------~~~~~~~~~~~~~g~~~~~~~~~ 328 (406)
T PRK11551 274 LIGALMDR--LRPRRVVLLIYAGIL-ASLAA----LA----AA--------------PSFAGMLLAGFAAGLFVVGGQSV 328 (406)
T ss_pred HHHHHHHH--HhHHHHHHHHHHHHH-HHHHH----HH----hc--------------CcHHHHHHHHHHHHHHHHhHHHH
Confidence 99999999 788876544332221 11111 10 00 11122344556677777777777
Q ss_pred HHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhccc
Q 012075 371 VYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTH 409 (471)
Q Consensus 371 ~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~ 409 (471)
.+.+..|.++ +++++++.|+.+.+..++.+++..+...
T Consensus 329 ~~~~~~~~~p-~~~~g~~~g~~~~~~~~g~~~g~~~~g~ 366 (406)
T PRK11551 329 LYALAPLFYP-TQVRGTGVGAAVAVGRLGSMAGPLLAGQ 366 (406)
T ss_pred HHHHHHHHcc-hhhhhhhhhHHHHhhhHHHHHHhhhHhh
Confidence 8888888884 3456899999999888888887766543
No 8
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.89 E-value=8.2e-22 Score=203.12 Aligned_cols=370 Identities=10% Similarity=0.049 Sum_probs=197.6
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEG 136 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~ 136 (471)
....+...+..+.+..++++++|+++||+|||+.++++.+++.+............+.+.++++|++.|+|.+..++...
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 149 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVP 149 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHH
Confidence 34456667778888899999999999999999999999988766433332212234556899999999999999999999
Q ss_pred hhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCC--ccccC
Q 012075 137 AIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPG--RVIRD 214 (471)
Q Consensus 137 ~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~--~~~r~ 214 (471)
.+++|+.|+++|++.+++++....+|..+|+.++....... +..+|++..++ .....++.. +..++.|++ +..++
T Consensus 150 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~-~~~~w~~~f~~-~~~~~~~~~-~~~~~l~~~~~~~~~~ 226 (481)
T TIGR00879 150 MYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLN-NTLGWRIPLGL-QLIPAGLLF-LGLFFLPESPRWLVGK 226 (481)
T ss_pred HHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCC-CCccHHHHHHH-HHHHHHHHH-HHHhcCCCChHHHHHc
Confidence 99999999999999999999999999999999871111111 11234443332 222222222 223333322 11111
Q ss_pred CCCcc---c-----cccCCC--HHH------------------HHHHHHHHhc--chhHHHHHHHHHHhHhH----hhhc
Q 012075 215 DGTHC---T-----NIKYSN--VST------------------EITQVLKLFS--NWKMLLIFPASWASNFF----YSYQ 260 (471)
Q Consensus 215 ~~~~~---~-----~~~~~~--~~~------------------~~~~~~~~~~--~~~~ll~~~~~~~~~~~----~s~~ 260 (471)
++.+. . ..+++. ..+ ++++.++..+ .++.+............ ..+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (481)
T TIGR00879 227 GRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYY 306 (481)
T ss_pred CChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHH
Confidence 10000 0 000000 000 0011111111 12222111111111110 0111
Q ss_pred ccccc-ccccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCC
Q 012075 261 FNNVN-GLQFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPA 339 (471)
Q Consensus 261 ~~~~~-~~~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (471)
.+.+. ..+++....++......++.+++.++.+++.|| +|||+....+..++.+ ...... .. .....+ +
T Consensus 307 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~--~~~~~~~~~~~~~~~~-~~~~~~--~~-~~~~~~---~- 376 (481)
T TIGR00879 307 SPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDR--FGRRPLLLIGAAGMAI-CLFVLG--IL-GASFVT---G- 376 (481)
T ss_pred HHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH--hcchHHHHHHHHHHHH-HHHHHH--HH-hhcccC---C-
Confidence 11111 123344345566677788899999999999999 7899877666444422 211111 00 000000 0
Q ss_pred ccCCCCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccCchhhHHHHH
Q 012075 340 KLDFKNSGSDFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTHKVSLLSQLVV 419 (471)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~~~p~~~~~~~ 419 (471)
.+ .. ..........++.+++..++.+..+.++.|.++ +++++++.++.+....++.++.-.+.+....... ...
T Consensus 377 -~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~-~~~ 450 (481)
T TIGR00879 377 -SS-KS--SGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFP-LSLRPKGISIAVAANWLANFIVGFLFPTMLESIG-VGG 450 (481)
T ss_pred -cc-cc--hhHHHHHHHHHHHHHHHccccCeehhhhhccCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccc
Confidence 00 00 122222333334444444555556666788884 3455889999988888877766654432111100 011
Q ss_pred HHHHHHhhhhhhhheeeeeeccCCCc
Q 012075 420 NWSLTTISYPLLVILVLLAVKDEKSP 445 (471)
Q Consensus 420 ~~~~~~~~~~~~i~~~~~~~pet~~~ 445 (471)
.+.+.++..+......+++.|||++.
T Consensus 451 ~f~~~~~~~~~~~i~~~~~~~~~~~~ 476 (481)
T TIGR00879 451 VFIFFGGLNVLGLIFVYFFLPETKGR 476 (481)
T ss_pred eehhHHHHHHHHHHHHheecccCCCC
Confidence 22222222223333345667888754
No 9
>PRK03545 putative arabinose transporter; Provisional
Probab=99.89 E-value=2.2e-20 Score=188.71 Aligned_cols=334 Identities=12% Similarity=0.094 Sum_probs=200.0
Q ss_pred hhHHHHHHHHHHhhhhhhhH----hhhhcCCCCCCChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHH
Q 012075 25 PLVQVCLIGLVCFCCPGMFN----ALSGMGGGGQVDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVL 100 (471)
Q Consensus 25 ~~~~~~~~~~~~f~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~ 100 (471)
+|..+..+.++.+....... ....+..+.+.++...+...+......+++++++|+++||+|||+.+.++.+++.+
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 86 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIA 86 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 45555555555544321111 12233333334555666667777778888999999999999999999999887766
Q ss_pred HHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCc
Q 012075 101 YAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEA 180 (471)
Q Consensus 101 ~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~ 180 (471)
..... ..++|.+.++++|++.|++.+..++....++.|+.|+++||+++|++.....+|..+|+.++..+...
T Consensus 87 ~~~~~---~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~---- 159 (390)
T PRK03545 87 SHVLS---ALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQY---- 159 (390)
T ss_pred HHHHH---HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHH----
Confidence 33322 33689999999999999999998888889999999999999999999999999999999987433221
Q ss_pred cccccchhHHHHHHHHHHHHHHHhccCCCccccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHH-h--Hh-H
Q 012075 181 VSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWA-S--NF-F 256 (471)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~--~~-~ 256 (471)
.+|++. ++...++.++..+......|+++ +++ +++ .++..+.+++|+++......+. . .+ .
T Consensus 160 ~gw~~~-f~~~~~~~~l~~~~~~~~~~~~~-~~~---------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (390)
T PRK03545 160 LGWRTT-FLAIGGGALITLLLLIKLLPLLP-SEH---------SGS----LKSLPLLFRRPALVSLYLLTVVVVTAHFTA 224 (390)
T ss_pred hcHHHH-HHHHHHHHHHHHHHHHHhCCCCC-CCC---------cch----HHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 234443 33333333333333333333211 110 111 1222334566655432221111 1 11 1
Q ss_pred hhhccccccc--cccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCC
Q 012075 257 YSYQFNNVNG--LQFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSH 334 (471)
Q Consensus 257 ~s~~~~~~~~--~~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 334 (471)
+++. +.+.. .+++....+......+++.+++.++.+++.|| .+||... .+.... ...... ... . .
T Consensus 225 ~~~~-~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr--~~~~~~~-~~~~~~---~~~~~~-l~~-~---~- 291 (390)
T PRK03545 225 YSYI-EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNR--HPSGFLL-IAIALL---LVCLLL-LLP-A---A- 291 (390)
T ss_pred HHHH-HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhc--cchhHHH-HHHHHH---HHHHHH-HHH-H---h-
Confidence 1221 22222 23344455666667788999999999999999 6777532 222211 111111 000 0 0
Q ss_pred CCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 335 DKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
.+.....++.+++|++.....+.....+.+..++ ++++++|.+.....+|.+++-.+..
T Consensus 292 -------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~G~~~~G 350 (390)
T PRK03545 292 -------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD--ATDVAMALFSGIFNIGIGAGALLGN 350 (390)
T ss_pred -------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC--cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122234456667777655555445556666643 4578899999888888888877654
No 10
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.88 E-value=4.2e-21 Score=199.13 Aligned_cols=366 Identities=13% Similarity=0.050 Sum_probs=197.2
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhh------c---ccchHHHHHHHHHHhhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYN------H---HKHQAFAIAAGAILGIG 127 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~------~---~~~~~~li~~r~l~G~g 127 (471)
+...+...+....+..++++++|+++||+|||++++++.+++.+......... . .++.+.++++|+++|++
T Consensus 54 ~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~ 133 (479)
T PRK10077 54 NSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIG 133 (479)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhh
Confidence 34556677778888899999999999999999999999988766433222100 0 12245788999999999
Q ss_pred hhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCC----CccccccchhHHHHHHHHHHHHHHH
Q 012075 128 AGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRN----EAVSVNDGTYIGFMCFMSAGALLSL 203 (471)
Q Consensus 128 ~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~ 203 (471)
.|...+...++++|++|+++||+++++++....+|..++++++..+..... +..+||+.. +...+..++..+..+
T Consensus 134 ~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f-~~~~~~~~~~~~~~~ 212 (479)
T PRK10077 134 VGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMF-ASEAIPALLFLMLLY 212 (479)
T ss_pred HhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHH-HHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998887654421100 112344433 222233333333333
Q ss_pred hccC-CCccccC---CCCccc---cccCCCHHH---HHHHHHHHh--cchhHHHH-----H---HHHHHhHhH-h---hh
Q 012075 204 VILP-PGRVIRD---DGTHCT---NIKYSNVST---EITQVLKLF--SNWKMLLI-----F---PASWASNFF-Y---SY 259 (471)
Q Consensus 204 ~l~~-p~~~~r~---~~~~~~---~~~~~~~~~---~~~~~~~~~--~~~~~ll~-----~---~~~~~~~~~-~---s~ 259 (471)
++++ |++..++ |+++.. ....+..++ +.++..+.. +.++.+.. . ....+.+.. + .+
T Consensus 213 ~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (479)
T PRK10077 213 FVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLY 292 (479)
T ss_pred cCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHH
Confidence 3322 2222111 110000 000111111 111111100 01111100 0 000011110 0 01
Q ss_pred ccccccc-cccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCC
Q 012075 260 QFNNVNG-LQFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPP 338 (471)
Q Consensus 260 ~~~~~~~-~~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (471)
..+.+.. .+++.....+.....++..+++.++.+++.|| +|||+..+.+..++.+.. .... .. . ..
T Consensus 293 ~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr--~g~r~~~i~~~~~~~v~~-~~l~--~~-~--~~----- 359 (479)
T PRK10077 293 YAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDK--FGRKPLQIIGALGMAIGM-FSLG--TA-F--YT----- 359 (479)
T ss_pred HHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH--hcChHHHHHhHHHHHHHH-HHHH--HH-H--hc-----
Confidence 1112111 12222233455566788899999999999999 899998877766553222 1111 00 0 00
Q ss_pred CccCCCCCCCCchhHHHHHHHHHhhHH-HHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccCc--hhhH
Q 012075 339 AKLDFKNSGSDFAGPFVLYFCYGLLDA-MFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTHKV--SLLS 415 (471)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~~~--p~~~ 415 (471)
+ . .... .....++++++.+ .+.+..+.++.|.++ ++++++++|+...++.++..++-.+.+... ++..
T Consensus 360 ---~--~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~ 430 (479)
T PRK10077 360 ---Q--A--PGIV-ALLSMLFYVAAFAMSWGPVCWVLLSEIFP-NAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLV 430 (479)
T ss_pred ---C--c--ccHH-HHHHHHHHHHHHhccccchhHHHhHhhCC-hhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchh
Confidence 1 1 1111 2222233333332 345667788899984 456689999999888888877644333111 1110
Q ss_pred -HHH--HHHHHHHhhhhhhhheeeeeeccCCCc
Q 012075 416 -QLV--VNWSLTTISYPLLVILVLLAVKDEKSP 445 (471)
Q Consensus 416 -~~~--~~~~~~~~~~~~~i~~~~~~~pet~~~ 445 (471)
..+ ..+.++++..+......++++|||+++
T Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 463 (479)
T PRK10077 431 AHFHNGFSYWIYGCMGVLAALFMWKFVPETKGK 463 (479)
T ss_pred hhccCccHHHHHHHHHHHHHHHHHhccccCCCC
Confidence 111 112222222223334456678999765
No 11
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.88 E-value=2e-20 Score=189.26 Aligned_cols=352 Identities=11% Similarity=0.010 Sum_probs=201.5
Q ss_pred hhcCCCCCCChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhh
Q 012075 47 SGMGGGGQVDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGI 126 (471)
Q Consensus 47 ~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~ 126 (471)
..+.++...+....+...+..+.++++++++.|+++||+|||+++..+.+++.+..... +.++|++.++++|+++|+
T Consensus 33 p~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~---~~a~~~~~ll~~r~l~Gi 109 (393)
T PRK09705 33 PQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMR---ELYPQSALLLSSALLGGV 109 (393)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHH---HHCcchHHHHHHHHHHHh
Confidence 33444433456666777888888899999999999999999999999999887644332 347899999999999999
Q ss_pred hhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhcc
Q 012075 127 GAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVIL 206 (471)
Q Consensus 127 g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~ 206 (471)
|.+..++....++.+..| ++|+++++++......|..+|+.+...+..+. .+|++..++ +.+...+..+..++..
T Consensus 110 g~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~---~~w~~~~~~-~~~~~~~~~~~~~~~~ 184 (393)
T PRK09705 110 GIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHS---ETWYQTLAW-WALPAVVALFAWWWQS 184 (393)
T ss_pred HHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCHHHHHHH-HHHHHHHHHHHHHHHh
Confidence 999999888889988875 88999999999999899999888763332111 134433222 2222222221111211
Q ss_pred CCCccccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHhHh---hhccccccc-cccccchhhhHHHHHH
Q 012075 207 PPGRVIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNFFY---SYQFNNVNG-LQFNLRTRGLNNVFYW 282 (471)
Q Consensus 207 ~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~---s~~~~~~~~-~~~~~~~~~l~~~~~~ 282 (471)
++++ +++++ ++.+. .+.+++|+.+.+..........+ ....+.+.. .+++..+.+......+
T Consensus 185 ~~~~--~~~~~-----~~~~~-------~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~ 250 (393)
T PRK09705 185 AREV--ASSHK-----TTTTP-------VRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMT 250 (393)
T ss_pred cCCC--ccccC-----CCcCC-------cccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHH
Confidence 1111 11000 00010 11234455443332222222111 111133332 2344445666677789
Q ss_pred HHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHh
Q 012075 283 GAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGL 362 (471)
Q Consensus 283 i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 362 (471)
++.+++.++.+++.|| .+||+....+.... .++... +.. .+ . ... ....++.|+
T Consensus 251 i~~i~g~~~~g~l~~r--~~~~~~~~~~~~l~-~~~~~~----~~~---~~--------~-----~~~---~~~~~l~g~ 304 (393)
T PRK09705 251 LGQAAGALLMPAMARH--QDRRKLLMLALVLQ-LVGFCG----FIW---LP--------L-----QLP---VLWAMVCGL 304 (393)
T ss_pred HHHHHHHHHHHHHHhh--ccchHHHHHHHHHH-HHHHHH----HHH---cc--------c-----hHH---HHHHHHHHH
Confidence 9999999999999998 78887665553322 111111 110 01 0 001 112233455
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccCchhhHHHHHHHHHHHhhhhhhhheeeeeeccC
Q 012075 363 LDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTHKVSLLSQLVVNWSLTTISYPLLVILVLLAVKDE 442 (471)
Q Consensus 363 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~~~~~~pet 442 (471)
+.+...+.......+...+++++++.+++.+.+..++..++..+..............+.+..+..+......+...|||
T Consensus 305 g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 305 GLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred hccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 55555555544445555444566888888888877776666554432211111122333333333333334445677888
Q ss_pred CCcc
Q 012075 443 KSPE 446 (471)
Q Consensus 443 ~~~~ 446 (471)
+.+|
T Consensus 385 ~~~~ 388 (393)
T PRK09705 385 FPQL 388 (393)
T ss_pred ccch
Confidence 5543
No 12
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.88 E-value=3.1e-20 Score=191.32 Aligned_cols=368 Identities=14% Similarity=0.080 Sum_probs=193.3
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHhhhhhHHHh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYY-NHHKHQAFAIAAGAILGIGAGLLWA 133 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~-~~~~~~~~li~~r~l~G~g~g~~~~ 133 (471)
.++...+...+....+.++++++.|+++||+|||+.++++.+++.+........ ..+++.+.+++.|++.|++.+..++
T Consensus 60 ~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~ 139 (452)
T PRK11273 60 FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWP 139 (452)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccch
Confidence 345556667778888889999999999999999999999998776543332221 1124678899999999999998877
Q ss_pred hhhhhhccCCCCCchhhHHHHHHHHHHhhh-hhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccC--CCc
Q 012075 134 AEGAIMTSYPPPNRKGTYISIFWSIFNMGG-VIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILP--PGR 210 (471)
Q Consensus 134 ~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~-~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~--p~~ 210 (471)
.....+.|+.|+++||+.+++++...++|. +.++++..+.... .+|++.++ +..++..+..++..++.| |+.
T Consensus 140 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~----~gw~~~f~-i~~~~~~~~~~l~~~~~~~~~~~ 214 (452)
T PRK11273 140 PCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF----NDWHAALY-MPAFAAILVALFAFAMMRDTPQS 214 (452)
T ss_pred HHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh----ccHHHHHH-HHHHHHHHHHHHHHHHccCCHhh
Confidence 777788899999999999999999988886 4566654333221 24554333 333333333333333323 221
Q ss_pred c--ccCCC-----Ccc---ccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHh---Hhhhcccccccc--ccccchhh
Q 012075 211 V--IRDDG-----THC---TNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNF---FYSYQFNNVNGL--QFNLRTRG 275 (471)
Q Consensus 211 ~--~r~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~---~~s~~~~~~~~~--~~~~~~~~ 275 (471)
. .++++ ++. .++++.+.++.+. ...+++|+++........... .....++.+... +++....+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~ 292 (452)
T PRK11273 215 CGLPPIEEYKNDYPDDYNEKHEQELTAKQIFM--QYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSS 292 (452)
T ss_pred cCCCChhhhhhccccccccccCCCccHHHHHH--HHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 1 00000 000 0001111222111 123456666544333222221 111222444432 34444555
Q ss_pred hHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHH
Q 012075 276 LNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFV 355 (471)
Q Consensus 276 l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (471)
.......++.+++.++.|+++||.+-+||... ....+....... . .+... . . .......+
T Consensus 293 ~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~--~~~~~~l~~~~~-~-~~~~~---~--------~-----~~~~~~~~ 352 (452)
T PRK11273 293 WAYFLYEYAGIPGTLLCGWMSDKVFRGNRGAT--GVFFMTLVTIAT-I-VYWLN---P--------A-----GNPTVDMA 352 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCcchH--HHHHHHHHHHHH-H-HHHHh---c--------c-----cChHHHHH
Confidence 66667788899999999999999322444321 111111111111 0 01000 0 0 11111122
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHH-HhhhcccCchhhHHHHHHHHHH-Hhhhhhhhh
Q 012075 356 LYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV-AWQVDTHKVSLLSQLVVNWSLT-TISYPLLVI 433 (471)
Q Consensus 356 ~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i-~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~i~ 433 (471)
+.+..|+..........++..|.++ +++++++.|+.+....++.++ +..+......... ....+.+. +.++++.+.
T Consensus 353 ~~~~~g~~~~~~~~~~~~~~~~~~p-~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g-~~~~f~~~~~~~~~~~~~ 430 (452)
T PRK11273 353 CMIVIGFLIYGPVMLIGLHALELAP-KKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVIL 430 (452)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHcC-hhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc-chHHHHHHHHHHHHHHHH
Confidence 2233333222222233445567773 445689999988877666443 3333222111111 11122222 223344444
Q ss_pred eeeeeeccCCCccCcccc
Q 012075 434 LVLLAVKDEKSPEESTNS 451 (471)
Q Consensus 434 ~~~~~~pet~~~~~~~~~ 451 (471)
.+++.-+|+|++||.+..
T Consensus 431 ~~~~~~~~~~~~~~~~~~ 448 (452)
T PRK11273 431 LIVVMIGEKRHHEELLQK 448 (452)
T ss_pred HHHHhccccchHHHHHhh
Confidence 455667888888887543
No 13
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.88 E-value=2e-20 Score=191.11 Aligned_cols=316 Identities=13% Similarity=0.016 Sum_probs=180.1
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++...+...+....+..+++++.|+++||+|||+++.++.+...+..... ..+++.+.++++|++.|++.+...+..
T Consensus 51 s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~G~g~g~~~~~~ 127 (426)
T PRK12307 51 TDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLS---GLASGVIMLTLSRFIVGMGMAGEYACA 127 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHhhHHHHH
Confidence 34455666777778888999999999999999999999998877643332 336789999999999999999999889
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhcc--CCCccc-
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVIL--PPGRVI- 212 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~--~p~~~~- 212 (471)
..++.|+.|+|+|+++++++.....+|.++++.+...+.. ..+|++..++ .++.. ++.++++ .|+..+
T Consensus 128 ~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~----~~~w~~~f~i--~~~~~---~~~~~~~~~~p~~~~~ 198 (426)
T PRK12307 128 STYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE----AYGWRAAFFV--GLLPV---LLVIYIRARAPESKEW 198 (426)
T ss_pred HHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc----cCCHHHHHHH--HHHHH---HHHHHHHHHCCCChHH
Confidence 9999999999999999999999999999998877533321 1235444332 11111 1112211 122211
Q ss_pred --cCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHH----HhHh--Hhhhccccccc-cccccchhhhHHHHHHH
Q 012075 213 --RDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASW----ASNF--FYSYQFNNVNG-LQFNLRTRGLNNVFYWG 283 (471)
Q Consensus 213 --r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~----~~~~--~~s~~~~~~~~-~~~~~~~~~l~~~~~~i 283 (471)
++.+++. +.++...++...+..+.+++|+......... ..+. .....++.+.. .+++....+......++
T Consensus 199 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 277 (426)
T PRK12307 199 EEAKLSGKG-KHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAF 277 (426)
T ss_pred HHhhhhccc-cccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 1100000 0001111100011222334444322211111 1111 01111133322 23333344555667788
Q ss_pred HHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhh
Q 012075 284 AQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLL 363 (471)
Q Consensus 284 ~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 363 (471)
+.+++.++.+++.|| +|||+....+.+... +.... .. . .+ + ........+.+..++.
T Consensus 278 ~~~~g~~~~g~l~dr--~~~~~~~~~~~~~~~-~~~~~----~~-~--~~--------~-----~~~~~~~~~~~~~~~~ 334 (426)
T PRK12307 278 GTVLGNIVWGLCADR--IGLKKTFSIGLLMSF-LFIFP----LF-R--IP--------Q-----DNYLLLGACLFGLMAT 334 (426)
T ss_pred HHHHHHHHHHHHHHH--hccHHHHHHHHHHHH-HHHHH----HH-H--Hc--------c-----ccHHHHHHHHHHHHHh
Confidence 999999999999999 789886655543321 11111 00 0 00 0 1111111111112222
Q ss_pred HHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 364 DAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 364 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
..+..+..+.++.|.++ ++++++++|+.+....++..++..+..
T Consensus 335 ~~~~~~~~~~~~~~~~p-~~~~g~~~g~~~~~~~~~~~~gp~~~g 378 (426)
T PRK12307 335 NVGVGGLVPKFLYDYFP-LEVRGLGTGLIYNLAATSGTFNSMAAT 378 (426)
T ss_pred cccHhHHHHHHHHHhCc-HHHHhhhhhHHHHHHhHHHHHHHHHHH
Confidence 22333445566778884 445689999888888888777766543
No 14
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.87 E-value=6.2e-20 Score=179.91 Aligned_cols=341 Identities=16% Similarity=0.206 Sum_probs=217.9
Q ss_pred cccchhHHHHHHHHHHhhhhhh----hHhhhhcCCCCCCChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHH
Q 012075 21 RYNSPLVQVCLIGLVCFCCPGM----FNALSGMGGGGQVDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACS 96 (471)
Q Consensus 21 ~~~~~~~~~~~~~~~~f~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~ 96 (471)
+.++.+..++.++++.|..-.. .+.+..+.++...+....+...+.+-.+.++++++...+.||+.||+.++....
T Consensus 7 ~~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~ 86 (394)
T COG2814 7 ARKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLA 86 (394)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH
Confidence 3445666777777777654321 122344444444555666777778888889999999999999999999999998
Q ss_pred HHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhcc
Q 012075 97 TYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYN 176 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~ 176 (471)
+|.+ ++..++.++|++.++++|++.|+..|..|.....+..++.||++|++++++......+..++|.-++..+..
T Consensus 87 lFi~---~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~- 162 (394)
T COG2814 87 LFIV---SNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQ- 162 (394)
T ss_pred HHHH---HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHH-
Confidence 8765 444445689999999999999999999999999999999999999999999999999999988777644432
Q ss_pred CCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHH--HhH
Q 012075 177 RNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASW--ASN 254 (471)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~--~~~ 254 (471)
..+||+. |+...++..+..+......||+...+ +++.+ .++.++.++||+++......+ +.+
T Consensus 163 ---~~GWR~~-F~~ia~l~ll~~~~~~~~lP~~~~~~--------~~~~~----~~~~~~~l~~p~v~~~l~~t~l~~~g 226 (394)
T COG2814 163 ---LFGWRAT-FLAIAVLALLALLLLWKLLPPSEISG--------SLPGP----LRTLLRLLRRPGVLLGLLATFLFMTG 226 (394)
T ss_pred ---HhhHHHH-HHHHHHHHHHHHHHHHHhCCCccCCC--------CCCcc----hhHHHHHhcCchHHHHHHHHHHHHcc
Confidence 1245544 33334444444444444455222111 01111 234456788888765544333 233
Q ss_pred h--Hhhhccccccc--cccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhc
Q 012075 255 F--FYSYQFNNVNG--LQFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQL 330 (471)
Q Consensus 255 ~--~~s~~~~~~~~--~~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~ 330 (471)
. .|+|. ..++. .+++....++..+.+|++.++|+.+.|++.|| +.|+.+......+... .... .
T Consensus 227 ~F~~ftYi-~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr---~~~~~l~~~~~l~a~~-~l~l------~- 294 (394)
T COG2814 227 HFALYTYI-RPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR---GPRRALIAALLLLALA-LLAL------T- 294 (394)
T ss_pred hhhhHHhH-HHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc---cchhHHHHHHHHHHHH-HHHH------H-
Confidence 2 34555 34432 35566667888899999999999999999998 3444333332222111 1111 0
Q ss_pred ccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhccc
Q 012075 331 NYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTH 409 (471)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~ 409 (471)
+. . .......+..+++++...........-+.+..+|.+ ..+.+++....++|.+++-.+...
T Consensus 295 -~~----------~---~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~--~~a~sl~~aa~nlgia~GA~lGG~ 357 (394)
T COG2814 295 -FT----------G---ASPALALALLFLWGFAFSPALQGLQTRLARLAPDAA--DLAGSLNVAAFNLGIALGAALGGL 357 (394)
T ss_pred -Hh----------c---chHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCch--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 111223444444666654443322222444333443 567788888888888888776643
No 15
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.87 E-value=3.6e-20 Score=189.86 Aligned_cols=323 Identities=13% Similarity=0.061 Sum_probs=182.8
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
.++...+...+....+..+++++.|++.||+|||+.+.++.+...+..... ..+++.+.+++.|++.|++.|..++.
T Consensus 55 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~g~~~g~~~~~ 131 (434)
T PRK11663 55 LSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILF---GFSSSLWAFALLWVLNAFFQGWGWPV 131 (434)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHccchH
Confidence 445556666777788888999999999999999999999998776533322 33678999999999999999988888
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHH-HHHHhccC-CCccc
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGA-LLSLVILP-PGRVI 212 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~l~~-p~~~~ 212 (471)
...++.|+.|+++||+.+++++....+|..+|+.+...+... .+|++..+ +..++..+.. +..+++++ |++.+
T Consensus 132 ~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~----~gw~~~f~-~~~i~~~~~~~~~~~~~~~~p~~~~ 206 (434)
T PRK11663 132 CAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH----YGWRYGMM-IAGIIAIVVGLFLCWRLRDKPQAMG 206 (434)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----ccHHHHHH-HHHHHHHHHHHHHHHHcCCCHhhcC
Confidence 889999999999999999999999999999999876433221 23544433 2222222222 22233332 21110
Q ss_pred -cC------CCCccccccCCCHHHHHHHHHH--HhcchhHHHHHHHHHHhHhHhh---hccccccc--cccccchhhhHH
Q 012075 213 -RD------DGTHCTNIKYSNVSTEITQVLK--LFSNWKMLLIFPASWASNFFYS---YQFNNVNG--LQFNLRTRGLNN 278 (471)
Q Consensus 213 -r~------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~~~~~~~~~~s---~~~~~~~~--~~~~~~~~~l~~ 278 (471)
++ ++++..++++ +.+.+.++.++ .+++|+++......+.....++ ..++.+.. .+++..+.+...
T Consensus 207 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~ 285 (434)
T PRK11663 207 LPSVGEWRHDALELAQQQE-GAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAV 285 (434)
T ss_pred CCCcccccccccccchhcc-ccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHH
Confidence 00 0000000000 00001122222 3456666554433222222111 11233332 234444556666
Q ss_pred HHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHH
Q 012075 279 VFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYF 358 (471)
Q Consensus 279 ~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (471)
...+++.+++.++.|++.||..-+||+...........+.... .. .. + . ..........+
T Consensus 286 ~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~----~~-~~--~--------~-----~~~~~~~~~~~ 345 (434)
T PRK11663 286 SMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGS----LW-LM--P--------F-----ASYVMQAACFF 345 (434)
T ss_pred HHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHH----HH-Hc--c--------c-----ccHHHHHHHHH
Confidence 6778999999999999999942122222111111110111111 10 00 1 0 11111222233
Q ss_pred HHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 012075 359 CYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVD 407 (471)
Q Consensus 359 ~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~ 407 (471)
..|++....+....+...|.++ +++++++.|+.+....+|.+++-...
T Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~p~~~ 393 (434)
T PRK11663 346 TIGFFVFGPQMLIGMAAAECSH-KEAAGAATGFVGLFAYLGAALSGYPL 393 (434)
T ss_pred HHHHHHhhHHHHHHHHHHhccc-HhhHHhHHHHHHHHHHHHHHHhcccH
Confidence 3444333333334456677773 45668999999888888877765543
No 16
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.87 E-value=1.1e-20 Score=195.41 Aligned_cols=354 Identities=13% Similarity=0.035 Sum_probs=194.7
Q ss_pred cccchhHHHHHHHHHHhhhhhh----h-HhhhhcCCCCCCChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHH
Q 012075 21 RYNSPLVQVCLIGLVCFCCPGM----F-NALSGMGGGGQVDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISAC 95 (471)
Q Consensus 21 ~~~~~~~~~~~~~~~~f~~~~~----~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~ 95 (471)
.|+|.+..++.+.++.+....+ + .....+..+.+.++...+...+..+.+++++.++.|+++||+|||+.+.++.
T Consensus 22 ~~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~ 101 (467)
T PRK09556 22 MWFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLL 101 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHH
Confidence 4555555555555555443211 1 1122223332334555566677778888999999999999999999998887
Q ss_pred HHHHHHHHH--HHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 96 STYVLYAGS--FLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 96 ~~~~~~~~~--~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
+...+.... ......+++.+.+++.|++.|++.+..++....+++|+.|+++||+++|++.....+|.++|+.+....
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~ 181 (467)
T PRK09556 102 ILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWG 181 (467)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHH
Confidence 665543222 111123578999999999999999999988899999999999999999999999999999998876322
Q ss_pred hccCCCccccccchhHHHHHHHHHHHHHHHhccC--CCccccCCCCc-------ccc--c-c-CCCHHHHHHHHHHHhcc
Q 012075 174 NYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILP--PGRVIRDDGTH-------CTN--I-K-YSNVSTEITQVLKLFSN 240 (471)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~--p~~~~r~~~~~-------~~~--~-~-~~~~~~~~~~~~~~~~~ 240 (471)
..... .+.|+ ..+....++.++..++.+++.+ |++.+..++++ .+. . + +.+.++.++ .+.+++
T Consensus 182 ~~~~~-~~~~~-~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~ 257 (467)
T PRK09556 182 ANYFF-DGHVI-GMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFV--EYVLKN 257 (467)
T ss_pred HHhhc-cCcch-hHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHH--HHHHcC
Confidence 21100 01222 2233323333332233333322 32211000000 000 0 0 001111111 114567
Q ss_pred hhHHHHHHHHHHhHhH---hhhccccccc--cccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHH
Q 012075 241 WKMLLIFPASWASNFF---YSYQFNNVNG--LQFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVA 315 (471)
Q Consensus 241 ~~~ll~~~~~~~~~~~---~s~~~~~~~~--~~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~ 315 (471)
|+++......+..... .....+.+.. .+++..+.++......++.+++.++.|+++|| +|||+.........
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr--~g~r~~~~~~~~~~- 334 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDL--ANGRRALVACIALA- 334 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCchHHHHHHHH-
Confidence 7766555443332221 1112244432 23444455666667788999999999999999 78876543322211
Q ss_pred HHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHH
Q 012075 316 LLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGV 395 (471)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 395 (471)
.+.... .... . + .+.....+..++.|+...+.....+....|.++ +++++++.|+.+..
T Consensus 335 ~~~~~~----~~~~--~---------~-----~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p-~~~~g~a~gi~~~~ 393 (467)
T PRK09556 335 LIIFTL----GVYQ--H---------A-----TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVP-KKAIGVANGIKGTF 393 (467)
T ss_pred HHHHHH----HHHH--h---------c-----CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcc-hhhHHHHHHHHHHH
Confidence 111100 0100 0 0 111122334444554333333333345557773 44568999999988
Q ss_pred HHH-HHHH
Q 012075 396 QSA-GAAV 402 (471)
Q Consensus 396 ~s~-g~~i 402 (471)
.++ |.++
T Consensus 394 g~l~g~~~ 401 (467)
T PRK09556 394 AYLFGDSF 401 (467)
T ss_pred HHHHhHHH
Confidence 775 4333
No 17
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.86 E-value=4.1e-19 Score=180.37 Aligned_cols=349 Identities=11% Similarity=0.022 Sum_probs=200.9
Q ss_pred cchhHHHHHHHHHHhhhhhhhHhh----hhcCCCCCCChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHH
Q 012075 23 NSPLVQVCLIGLVCFCCPGMFNAL----SGMGGGGQVDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTY 98 (471)
Q Consensus 23 ~~~~~~~~~~~~~~f~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~ 98 (471)
++++...+.+.+..++.....+.. ..+..+.+.++...+...+....+..++.++.|+++||+|||+.++++.+.+
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 88 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFF 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 445555555555555443222211 1122222234455566677777888888999999999999999999998776
Q ss_pred HHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCC
Q 012075 99 VLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRN 178 (471)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~ 178 (471)
.+..... ..+++.+.+++.|++.|++.+...+....++.|..|+++|++.+++......+|..+||.++..+...
T Consensus 89 ~~~~~~~---~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-- 163 (406)
T PRK15402 89 ILTCLAI---LLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHV-- 163 (406)
T ss_pred HHHHHHH---HHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--
Confidence 6533322 23578999999999999999988888888899999999999999999888888999999886433221
Q ss_pred CccccccchhHHHHHHHHHHHHHHHhccCCCccccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHh---
Q 012075 179 EAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNF--- 255 (471)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~--- 255 (471)
.+|++. ++...++.++..+...+..|+++ ++++ ++.+.++..++..+.+++|+++...........
T Consensus 164 --~~w~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (406)
T PRK15402 164 --LPWRGM-FVLFAALAALSFFGLWRAMPETA-GRVG-------EKLSLKELGRDYKLVLKNRRFVAGALALGLVSLPLL 232 (406)
T ss_pred --cCccHH-HHHHHHHHHHHHHHHHHhCCCCC-cccc-------ccccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 235443 33333333333333333333221 1110 011111112223334567766554433322221
Q ss_pred Hhhhccccccc--cccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccC
Q 012075 256 FYSYQFNNVNG--LQFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYS 333 (471)
Q Consensus 256 ~~s~~~~~~~~--~~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 333 (471)
.+....+.+.. .+++..+.++......++.+++.++.+++.|| ++||+....+...+ .++..... .. .
T Consensus 233 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r--~~~~~~~~~~~~~~-~~g~~~~~--~~-~---- 302 (406)
T PRK15402 233 AWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSR--RPLRSLIRMGLWPM-VAGLLLAA--LA-T---- 302 (406)
T ss_pred HHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHH-HHHHHHHH--HH-H----
Confidence 11111122222 12333334555555677888999999999999 78888665554433 22222211 10 0
Q ss_pred CCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhccc
Q 012075 334 HDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTH 409 (471)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~ 409 (471)
.... ..+....+..++++++.+...+...... .... +++++++.+.++..+.++.+++..+...
T Consensus 303 --------~~~~--~~~~~~~~~~~~~g~g~~~~~~~~~~~~-~~~~-~~~~g~~~~~~~~~~~~~~~~g~~~~~~ 366 (406)
T PRK15402 303 --------VISS--HAYLWLTAGLSLYAFGIGLANAGLYRLT-LFSS-DVSKGTVSAAMGMLSMLIFTVGIELSKH 366 (406)
T ss_pred --------Hccc--ccHHHHHHHHHHHHHHHHHHhhhHHHHH-hhhc-cccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0001 1222234455566776666555444333 2222 2456889999998888888887776554
No 18
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.86 E-value=2.9e-19 Score=181.80 Aligned_cols=332 Identities=11% Similarity=0.005 Sum_probs=187.9
Q ss_pred hcCCCCCCChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhh
Q 012075 48 GMGGGGQVDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIG 127 (471)
Q Consensus 48 ~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g 127 (471)
.++.+...++...+...+..+.+.++++++.|++.||+|||+.+.++.+++.+..... +.++|.+.++++|++.|++
T Consensus 33 ~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~G~~ 109 (412)
T TIGR02332 33 TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTAT---MFATGPESLYLLRILVGIA 109 (412)
T ss_pred hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHH---HHhcCHHHHHHHHHHHHHH
Confidence 3444433455666777888888999999999999999999999999998877643332 3468899999999999999
Q ss_pred hhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCC--CccccccchhHHHHHHHHHHHHHHHhc
Q 012075 128 AGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRN--EAVSVNDGTYIGFMCFMSAGALLSLVI 205 (471)
Q Consensus 128 ~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~l 205 (471)
.+..+++...++.|+.|+++||+.+++++....+|..+|+.++..+..... +..+||+.++ +..+..++..++..++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~-~~~~~~l~~~~~~~~~ 188 (412)
T TIGR02332 110 EAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFL-LEGFPSVILGVMTWFW 188 (412)
T ss_pred HhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHH-HHHHHHHHHHHHHhhc
Confidence 999988888999999999999999999999999999999998744331100 1124554433 3333333333333333
Q ss_pred cC--CCccc--cCCCCcc------------ccccCC--CHHHHHHHHHHHhcchhHHHHHHHHHHhHh-Hh--hhccccc
Q 012075 206 LP--PGRVI--RDDGTHC------------TNIKYS--NVSTEITQVLKLFSNWKMLLIFPASWASNF-FY--SYQFNNV 264 (471)
Q Consensus 206 ~~--p~~~~--r~~~~~~------------~~~~~~--~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~-~~--s~~~~~~ 264 (471)
.| |++.+ ++++++. ++++++ +.....++.++..++|.+++.....+.... .+ ...++.+
T Consensus 189 ~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 268 (412)
T TIGR02332 189 LDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIFTPAIMLYTLAYFCLTNTLSAINIWTPQI 268 (412)
T ss_pred cCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 22110 0000000 000000 000011223343445555544433332221 11 1122444
Q ss_pred ccc---ccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCcc
Q 012075 265 NGL---QFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKL 341 (471)
Q Consensus 265 ~~~---~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (471)
+.. +++..+.+.......++.++|.++.|+++|| ++||+...+.......+ .+. .. .. .
T Consensus 269 l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr--~~~r~~~~~~~~~~~~~---~~~--~~-~~--~-------- 330 (412)
T TIGR02332 269 LQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDR--LKERKHHTALPYLFAAA---GWL--LA-SA--T-------- 330 (412)
T ss_pred HHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcc--cCccHHHHHHHHHHHHH---HHH--HH-Hh--c--------
Confidence 432 2233345566777889999999999999999 67665322211111111 111 10 10 0
Q ss_pred CCCCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 342 DFKNSGSDFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
+ + ... ......+.+++.....+..+....|.+ ++++++++.|+.+.+..+|.+++-.+..
T Consensus 331 ~--~--~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~a~g~~~~~~~~g~~~~p~~~g 390 (412)
T TIGR02332 331 D--H--NLI--QLLGIIMASMGSFSAMAIFWTTPDQSI-SLQARAIAIAVINATGNIGSALSPFLIG 390 (412)
T ss_pred C--C--HHH--HHHHHHHHHHHhhhhhhHHHhhccccc-chHHHHHHHHHHHHhhhhhhhhhhhhcc
Confidence 1 1 111 111111222222222222222334445 3556689999999998888877765443
No 19
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.86 E-value=2.6e-19 Score=178.10 Aligned_cols=317 Identities=14% Similarity=0.087 Sum_probs=195.3
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhc--ccchHHHHHHHHHHhhhhhHHHh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNH--HKHQAFAIAAGAILGIGAGLLWA 133 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~--~~~~~~li~~r~l~G~g~g~~~~ 133 (471)
++...+...+.......++++++|+++||+|||+.++++.++..+.......... .++.+.++++|++.|++.+..++
T Consensus 32 s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 111 (365)
T TIGR00900 32 SASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTP 111 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666777777888999999999999999999998766543322222111 12889999999999999999999
Q ss_pred hhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCcccc
Q 012075 134 AEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIR 213 (471)
Q Consensus 134 ~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r 213 (471)
+..+++.|+.|+++|++.++++.....+|.++|+.++..+... .+|++..+ ...+...+..+...++++|++.++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~----~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 186 (365)
T TIGR00900 112 AYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT----LGIKWAIW-VDAVGFAISALLIVSVRIPELAAS 186 (365)
T ss_pred HHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH----hhHHHHHH-HHHHHHHHHHHHHHhcccccCCCc
Confidence 9999999999999999999999999999999999987444321 23443322 222222222223333333332111
Q ss_pred CCCCccccccCCCHHHHHHHHHH-HhcchhHHHHHHHHHHhHhH----hhhcccccccc--ccccchhhhHHHHHHHHHH
Q 012075 214 DDGTHCTNIKYSNVSTEITQVLK-LFSNWKMLLIFPASWASNFF----YSYQFNNVNGL--QFNLRTRGLNNVFYWGAQM 286 (471)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~~~~~~~~~----~s~~~~~~~~~--~~~~~~~~l~~~~~~i~~i 286 (471)
+ +++ .+++..++.++.++ .+++|+++......+..... .....+.+... +.+..+.+......+++.+
T Consensus 187 ~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (365)
T TIGR00900 187 E-IQA----LSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGAL 261 (365)
T ss_pred c-ccc----cchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 1 110 01111222222222 34556554443332222211 11111232222 2333445666777889999
Q ss_pred HHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHH
Q 012075 287 LGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAM 366 (471)
Q Consensus 287 ~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 366 (471)
++.++.+++.|| .+||+....+..... ..... .. +. . ++.....+..++.|++.+.
T Consensus 262 ~~~~~~~~l~~~--~~~~~~~~~~~~~~~---~~~~~--~~----~~-----------~--~~~~~~~~~~~~~g~~~~~ 317 (365)
T TIGR00900 262 LGALLLGLLGRY--FKRMALMTGAIFVIG---LAILV--VG----LT-----------P--PNFPLFLVLWFAIGVGYGP 317 (365)
T ss_pred HHHHHHHHHHHH--hchhHHHHHHHHHHH---HHHHH--HH----hh-----------c--hhHHHHHHHHHHHHHHHHH
Confidence 999999999998 678876554432221 11111 10 00 0 1123345667778888888
Q ss_pred HHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 012075 367 FQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVD 407 (471)
Q Consensus 367 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~ 407 (471)
..+....++.+..+ +++++++.++++.+++++..++..+.
T Consensus 318 ~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~g~~~~ 357 (365)
T TIGR00900 318 INVPQGTLLQRRVP-AELLGRVFGAQFSLSHAAWPLGLILA 357 (365)
T ss_pred HHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888884 45668999999999888887776653
No 20
>TIGR00898 2A0119 cation transport protein.
Probab=99.86 E-value=9.1e-20 Score=190.51 Aligned_cols=315 Identities=11% Similarity=0.036 Sum_probs=186.8
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEG 136 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~ 136 (471)
+...+...++.+.+..+++++.|+++||+|||++++++.++..+..... +.++|++.++++|++.|++.+...+...
T Consensus 126 ~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 202 (505)
T TIGR00898 126 AWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLT---AFSPNYTVFLVFRLLVGMGIGGIWVQAV 202 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHH---HHcccHHHHHHHHHHHHhhccchHHHHH
Confidence 3445667778888889999999999999999999999988776533322 3468999999999999999999999999
Q ss_pred hhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccC-CCccc---
Q 012075 137 AIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILP-PGRVI--- 212 (471)
Q Consensus 137 ~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~-p~~~~--- 212 (471)
.++.|+.|+++|++..+++.....+|.++++.+++.+. .|++. +++..+..++..+..+++.+ |++..
T Consensus 203 ~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~-------~wr~~-~~~~~i~~~~~~~~~~~~~esp~~l~~~~ 274 (505)
T TIGR00898 203 VLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP-------DWRWL-QLAVSLPTFLFFLLSWFVPESPRWLISQG 274 (505)
T ss_pred HHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-------HHHHH-HHHHHHHHHHHHHHHHhcCCChHHHHHCC
Confidence 99999999999999999999999999999998874332 24443 33333333333333333322 33321
Q ss_pred cCCCCccc-----c--cc--C-----CCHHHH---H---HHHHHHhcchhHHHHHHHHHHh--HhHhhhccccccccccc
Q 012075 213 RDDGTHCT-----N--IK--Y-----SNVSTE---I---TQVLKLFSNWKMLLIFPASWAS--NFFYSYQFNNVNGLQFN 270 (471)
Q Consensus 213 r~~~~~~~-----~--~~--~-----~~~~~~---~---~~~~~~~~~~~~ll~~~~~~~~--~~~~s~~~~~~~~~~~~ 270 (471)
|.++++.. . .. . ....++ - ....+.+++|++.......... .....+.........++
T Consensus 275 ~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (505)
T TIGR00898 275 RIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLG 354 (505)
T ss_pred CHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccC
Confidence 11110000 0 00 0 000000 0 0122334455443332222111 11111110011111111
Q ss_pred cchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCc
Q 012075 271 LRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDF 350 (471)
Q Consensus 271 ~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (471)
. .........++..+++.++.+++.|| +|||+....+..++++.. +.. .. .+ + ...
T Consensus 355 ~-~~~~~~~~~~~~~i~~~~~~~~l~dr--~grr~~~~~~~~~~~~~~-l~~----~~---~~--------~-----~~~ 410 (505)
T TIGR00898 355 G-NIYLDLFISGLVELPAKLITLLLIDR--LGRRYTMAASLLLAGVAL-LLL----LF---VP--------V-----DLY 410 (505)
T ss_pred C-ChHHHHHHHHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHH-HHH----HH---cC--------C-----Cch
Confidence 1 12344456678888999999999999 899987766544332211 111 10 01 0 111
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 012075 351 AGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVD 407 (471)
Q Consensus 351 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~ 407 (471)
....+..++.+++.....+..+.+..|+++ ++.+++++|+.+.+..+|..++..+.
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~g~~~~~~~ig~~i~p~i~ 466 (505)
T TIGR00898 411 FLRTALAVLGKFGITSAFQMVYLYTAELYP-TVVRNLGVGVCSTMARVGSIISPFLV 466 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccc-HHHHhhhHhHHHHHHHHHHHHHhHHH
Confidence 122333444455555566677888899984 34458889988888888877776543
No 21
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.85 E-value=2.4e-19 Score=182.77 Aligned_cols=313 Identities=13% Similarity=-0.005 Sum_probs=184.8
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhh--hcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYY--NHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~--~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
+...+...+.......+++++.|+++||+|||+.+.++.+...+........ ...++.+.+++.|++.|++.+...++
T Consensus 51 ~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~ 130 (417)
T PRK10489 51 TLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTA 130 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 4445666667777778889999999999999999988876554422221110 12457788999999999999988888
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccC
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRD 214 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~ 214 (471)
...++.|..|+++|+++.++.....++|..+|+.++..+... .+|+|..+ ...+...+..++.+. .|+.+.+++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~----~~~~~~~~-~~~~~~~~~~~~~~~-l~~~~~~~~ 204 (417)
T PRK10489 131 LLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAA----GGVAWNYG-LAAAGTFITLLPLLR-LPALPPPPQ 204 (417)
T ss_pred HhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH----HhhHHHHH-HHHHHHHHHHHHHHh-CCCCCCCCc
Confidence 888899999999999999999999999999999987433221 13444432 222222222222222 232111110
Q ss_pred CCCccccccCCCHHHHHHHHHH-HhcchhHHHHHHHHHHhHhH--hhhcccccccc--ccccchhhhHHHHHHHHHHHHh
Q 012075 215 DGTHCTNIKYSNVSTEITQVLK-LFSNWKMLLIFPASWASNFF--YSYQFNNVNGL--QFNLRTRGLNNVFYWGAQMLGS 289 (471)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~~~~~~~~~--~s~~~~~~~~~--~~~~~~~~l~~~~~~i~~i~g~ 289 (471)
+ +++. .++.++.++ .+++|++.......+..... +...++.+... +.+....++.....+++.+++.
T Consensus 205 -~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~ 276 (417)
T PRK10489 205 -P------REHP-LRSLLAGFRFLLASPVVGGIALLGGLLTMASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGA 276 (417)
T ss_pred -c------cccc-hHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHH
Confidence 0 0111 112222222 34455543322221111111 11111333322 2343455666677889999999
Q ss_pred hhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHH
Q 012075 290 VGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQS 369 (471)
Q Consensus 290 ~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 369 (471)
++.+++.|| .++++.+..+.+.. .+.... +. .. ++.....++.+++|++.+...+
T Consensus 277 ~~~~~l~~~--~~~~~~l~~~~~~~-~~~~~~----~~----~~--------------~~~~~~~~~~~~~g~~~~~~~~ 331 (417)
T PRK10489 277 LTSGWLAHS--ARPGLLMLLSTLGS-FLAVGL----FG----LM--------------PMWILAVLCLALFGYLSAISSL 331 (417)
T ss_pred HHHHHhhhc--cCcchHHHHHHHHH-HHHHHH----HH----cc--------------chHHHHHHHHHHHHHHHHHHHH
Confidence 999999887 44444443333222 111111 10 00 1222345566667777777666
Q ss_pred HHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhccc
Q 012075 370 MVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTH 409 (471)
Q Consensus 370 ~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~ 409 (471)
..+.++.+..+ ++.++++.|+++...++|.+++..+...
T Consensus 332 ~~~~~~~~~~p-~~~~g~~~g~~~~~~~~g~~~g~~l~G~ 370 (417)
T PRK10489 332 LQYTLLQTQTP-DEMLGRINGLWTAQNVTGDAIGAALLGG 370 (417)
T ss_pred HHHHHHHhhCC-HHHHHHHHHHHHHHHhhhHhHHHHHHHH
Confidence 66677777773 3456899999999888888888776543
No 22
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.85 E-value=9.7e-20 Score=182.65 Aligned_cols=327 Identities=14% Similarity=0.116 Sum_probs=191.1
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++...+...+.......++++++|+++||+|||+.+.++.+++.+..... ..++|.+.++++|++.|++.+..++..
T Consensus 27 s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~g~~~~~~~~~~ 103 (399)
T TIGR00893 27 SAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQ---AFAGAYVSLYILRVLLGAAEAPFFPGI 103 (399)
T ss_pred ChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHH---HHHcCHHHHHHHHHHHHHHHHhhhhHH
Confidence 34455666777778888899999999999999999999988776543332 235789999999999999999999999
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCcc-cc-
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRV-IR- 213 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~-~r- 213 (471)
..++.|+.|+++|++.++++.....+|..+|+.+...+... .+|++. ++...++..+..+...++.|+++. ++
T Consensus 104 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (399)
T TIGR00893 104 ILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH----FSWQWA-FIIEGVLGIIWGVLWLKFIPDPPQKAKW 178 (399)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh----CCchHH-HHHHHHHHHHHHHHhhheecCCCCcccc
Confidence 99999999999999999999999999999999987444322 234433 333333333333333333332111 01
Q ss_pred CCCCccc----c---c--cCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHh---Hhhhcccccccc--ccccchhhhHHH
Q 012075 214 DDGTHCT----N---I--KYSNVSTEITQVLKLFSNWKMLLIFPASWASNF---FYSYQFNNVNGL--QFNLRTRGLNNV 279 (471)
Q Consensus 214 ~~~~~~~----~---~--~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~---~~s~~~~~~~~~--~~~~~~~~l~~~ 279 (471)
.++++.. . + +++..+++.++..+.+++|+++......+.... .+...++.+... +++..+.++...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (399)
T TIGR00893 179 LTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMAS 258 (399)
T ss_pred CCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHH
Confidence 0000000 0 0 000000011122334566666554443332221 111111333222 233334566677
Q ss_pred HHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHH
Q 012075 280 FYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFC 359 (471)
Q Consensus 280 ~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (471)
..+++.+++.++.+++.|| ++||+..+................... .. +.. .... ..+....
T Consensus 259 ~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------~~~---~~~~-~~~~~~~ 320 (399)
T TIGR00893 259 LPGIVGFIGMILGGRLSDL--LLRRGKSLVFARKTAIIAGLVLSLLMF-AT-----------NYV---NIPY-AALALVA 320 (399)
T ss_pred HHHHHHHHHHHHHHHHHHH--HhhcccchhHHHHHHHHHHHHHHHHHH-Hh-----------ccc---hhHH-HHHHHHH
Confidence 7888999999999999999 677762222111111111111110010 00 101 1111 1222223
Q ss_pred HHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhccc
Q 012075 360 YGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTH 409 (471)
Q Consensus 360 ~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~ 409 (471)
.+....+..+..+.+..|..+ +++++++.++.+.+.+++..++-.+...
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~g~~~~~~i~g~ 369 (399)
T TIGR00893 321 LGFFGLGAGAIGWALISDNAP-GNIAGLTGGLINSLGNLGGIVGPIVIGA 369 (399)
T ss_pred HHHhchhhhhHHHHHHHhhcC-hhHHHHHHHHHHHHHHHhhhhhhHHhhh
Confidence 333333467778888899884 4456899999999998888888766543
No 23
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.85 E-value=6.4e-25 Score=225.99 Aligned_cols=362 Identities=14% Similarity=0.174 Sum_probs=200.4
Q ss_pred hhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhccc---chHHHHHHHHHHhhhhhHHHhhhh
Q 012075 60 ANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHK---HQAFAIAAGAILGIGAGLLWAAEG 136 (471)
Q Consensus 60 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~---~~~~li~~r~l~G~g~g~~~~~~~ 136 (471)
.....+..+.+..+|+++.|.++||+|||++++++.+++.+.... ...++ |.+.++++|++.|++.|...+..+
T Consensus 48 ~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 48 SSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSIL---IAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHHHHhhhccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc
Confidence 355677778888899999999999999999999999887663322 23456 899999999999999999999999
Q ss_pred hhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccC--CCccc--
Q 012075 137 AIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILP--PGRVI-- 212 (471)
Q Consensus 137 ~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~--p~~~~-- 212 (471)
.|+.|++|+++||+..++++..+.+|.+++.++.+...... ..+.|+....+..+..+..++..++.| |+|+.
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~---~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~ 201 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS---DNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSK 201 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccceeccc
Confidence 99999999999999999999999999999988875442211 112233333222222222222333445 66642
Q ss_pred -cCCCCcccc-------ccCCCHHH---H----------HHHHHHHhc-chhHHHHHHHHHHhHhH---hhhcccccccc
Q 012075 213 -RDDGTHCTN-------IKYSNVST---E----------ITQVLKLFS-NWKMLLIFPASWASNFF---YSYQFNNVNGL 267 (471)
Q Consensus 213 -r~~~~~~~~-------~~~~~~~~---~----------~~~~~~~~~-~~~~ll~~~~~~~~~~~---~s~~~~~~~~~ 267 (471)
|.|+++... .++++.++ + +++.++..+ +++++....+...+.+. ....+.+....
T Consensus 202 ~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~ 281 (451)
T PF00083_consen 202 GRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFE 281 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccccc
Confidence 222221100 00000100 0 112222211 12333322222222221 01111111111
Q ss_pred ccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCC
Q 012075 268 QFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSG 347 (471)
Q Consensus 268 ~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (471)
..+.+..-+.+...++..+++.++...+.|| +|||+..+.+..++.++...+. . . .....++ + ++.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~GRr~~~i~~~~~~~~~~~~~~-~-~--~~~~~~~--~---~~~--- 347 (451)
T PF00083_consen 282 NAGISNSFLATLILGLVNFLGTLLAIFLIDR--FGRRKLLIIGLLLMAICSLILG-I-I--FFLGVSS--S---SWW--- 347 (451)
T ss_pred ccccccccccccccccccccccccccccccc--cccccccccccccccccccccc-c-c--ccccccc--c---ccc---
Confidence 1121122234455667777888877789999 8999988888766633322221 0 0 0011110 0 111
Q ss_pred CCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccCchhhH-HH--HHHHHHH
Q 012075 348 SDFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTHKVSLLS-QL--VVNWSLT 424 (471)
Q Consensus 348 ~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~~~p~~~-~~--~~~~~~~ 424 (471)
.+....+..++..++..++.+..+.+.+|+++. +.|+++.++...+..++..+.-.+ .|+.. .. ...+.++
T Consensus 348 -~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt-~~R~~~~~~~~~~~~i~~~i~~~~----~~~~~~~~~~~~~~~i~ 421 (451)
T PF00083_consen 348 -SILSIVFLALFFAFFSLGWGPLPWIYTAELFPT-KVRSTGIGLSYAVGRIGGFIIPFL----FPYLFNNLGGWGVFLIF 421 (451)
T ss_pred -ccccceeeeeccccccccccccccccccccccc-cccccccccccccccccccccccc----cccccccccccccchhh
Confidence 222223333334455667777777788999932 233566655555443333333222 22211 11 1223334
Q ss_pred HhhhhhhhheeeeeeccCCCccC
Q 012075 425 TISYPLLVILVLLAVKDEKSPEE 447 (471)
Q Consensus 425 ~~~~~~~i~~~~~~~pet~~~~~ 447 (471)
....+....+.++++|||+...-
T Consensus 422 ~~~~~i~~i~~~~~lpET~g~~l 444 (451)
T PF00083_consen 422 AGVCLIAIIFVYFFLPETKGKTL 444 (451)
T ss_pred HHHHHHHHhheeEEEeeCCCCCH
Confidence 44444555678899999977643
No 24
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.85 E-value=1.7e-18 Score=175.70 Aligned_cols=319 Identities=14% Similarity=0.109 Sum_probs=182.9
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhc-ccchHHHHHHHHHHhhhhhHHHhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNH-HKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~-~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
++...+...+.......++++++|++.||+|||+.+..+.+++.+........+. .++.+.+++.|++.|+|.+...+.
T Consensus 46 s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~ 125 (402)
T TIGR00897 46 SPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYS 125 (402)
T ss_pred CHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhH
Confidence 3445566667777778889999999999999999999999877664332221122 357888899999999999887777
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhh-hhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCcccc
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGG-VIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIR 213 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~-~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r 213 (471)
...++.+..|+++||+++|++++..++|. .+|+.++..+... .+++...|.. .....+..++.+++.++++.++
T Consensus 126 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~----~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 200 (402)
T TIGR00897 126 FLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA----FGEMNTLWSA-LAFVLTGGVIALFSNKDIFTPQ 200 (402)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc----cchHHHHHHH-HHHHHHHHHHHHhccCCCCCcc
Confidence 77778888899999999999999999997 5788776322211 1222222221 1122222233333333211111
Q ss_pred CCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHh-Hh--hhccccccc-cccccchhhhHHHHHHHHHHHHh
Q 012075 214 DDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNF-FY--SYQFNNVNG-LQFNLRTRGLNNVFYWGAQMLGS 289 (471)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~-~~--s~~~~~~~~-~~~~~~~~~l~~~~~~i~~i~g~ 289 (471)
+++ ++++..+..+.....+++|++++.....+.... .+ ....+.+.. .+++..+.+......+++.+++.
T Consensus 201 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~ 274 (402)
T TIGR00897 201 HMQ------TREKFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFN 274 (402)
T ss_pred ccc------CCcchhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHH
Confidence 000 011111111222234567776554433322211 11 111133332 23343344555556788999999
Q ss_pred hhhhhhcccCCCCccceeee-hhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHH
Q 012075 290 VGIGYIFDFSFPTRRKRGFV-GIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQ 368 (471)
Q Consensus 290 ~~~g~l~D~~~~gRr~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 368 (471)
+..|++.|| ++||+.... +...+....... ... + .... .......+..+++|++.+...
T Consensus 275 ~~~g~l~dr--~~~~~~~~~~~~l~~~~~~~~l-----~~~---~--------~~~~--~~~~~~~~~~~~~G~~~~~~~ 334 (402)
T TIGR00897 275 VIFGIVGDK--LGWMNTVRWFGGVGCGIFTLAL-----YYI---P--------QHFG--HSFAVALIIAIALGIFLAGYV 334 (402)
T ss_pred HHHHHHHHh--hcchhHHHHHHHHHHHHHHHHH-----HHH---H--------HccC--CcHHHHHHHHHHHHHHHHHHH
Confidence 999999999 777775431 111111111111 100 0 0001 122233455666777776665
Q ss_pred HHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 369 SMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 369 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
+. .+.+.+..+ ++++++.|+.+....++..++..+..
T Consensus 335 ~~-~~~~~~~~~--~~~g~~~g~~~~~~~lg~~~gp~i~g 371 (402)
T TIGR00897 335 PL-AAVFPTLAP--KHKGAAMSVLNLSAGLSAFLAPAIAV 371 (402)
T ss_pred HH-HHHHHhhCc--chhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 53 345566553 35689999999998888877776554
No 25
>PRK12382 putative transporter; Provisional
Probab=99.84 E-value=3.1e-18 Score=173.08 Aligned_cols=306 Identities=13% Similarity=0.009 Sum_probs=181.4
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhh-----cccchHHHHHHHHHHhhhhh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYN-----HHKHQAFAIAAGAILGIGAG 129 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~-----~~~~~~~li~~r~l~G~g~g 129 (471)
.++...+...+..+....++++++|+++||+|||+.++++.+...+......... ..++.+.++++|+++|++.+
T Consensus 48 ~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 127 (392)
T PRK12382 48 FGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGES 127 (392)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHH
Confidence 3455667778888888899999999999999999999998876554322221111 12467889999999999999
Q ss_pred HHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccC-C
Q 012075 130 LLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILP-P 208 (471)
Q Consensus 130 ~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~-p 208 (471)
...++..+++.|..|+++|+++++++......|..+|+.++..+... .+|++ .+.+..++..+...+.++ |
T Consensus 128 ~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~----~g~~~----~~~~~~~~~~~~~~~~~~~~ 199 (392)
T PRK12382 128 QLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSH----FGFAA----LALTTMVLPLLAWAFNGTVR 199 (392)
T ss_pred HHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhc----cChHH----HHHHHHHHHHHHHHHHHhcc
Confidence 98888888899999999999999999999999999999987433221 12221 111111112222222222 2
Q ss_pred CccccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHhHhhhccccccccccccchhhhHHHHHHHHHHHH
Q 012075 209 GRVIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNFFYSYQFNNVNGLQFNLRTRGLNNVFYWGAQMLG 288 (471)
Q Consensus 209 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~~~~i~~i~g 288 (471)
+.. +++ +++++.++ ..+.+.++++............ ..+. +.+... .+....++.....+++.+++
T Consensus 200 ~~~-~~~------~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~-~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 265 (392)
T PRK12382 200 KVP-AHA------GERPSLWS----VVGLIWKPGLGLALQGVGFAVI-GTFV-SLYFAS-KGWAMAGFTLTAFGGAFVLM 265 (392)
T ss_pred CCC-CCc------ccCchHHH----HHHHHHHhHHHHHHHHHHHhHH-HHHH-HHHHHh-cCCchhHHHHHHHHHHHHHH
Confidence 111 000 11122222 2222223333221111111111 1111 112111 12223344455677888899
Q ss_pred hhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHH
Q 012075 289 SVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQ 368 (471)
Q Consensus 289 ~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 368 (471)
.+..|++.|| +|||+....+..... +..... .. . ++.....+..++.+++.+...
T Consensus 266 ~~~~g~l~~r--~g~~~~~~~~~~~~~-~~~~~~----~~----~--------------~~~~~~~~~~~l~g~~~~~~~ 320 (392)
T PRK12382 266 RVLFGWMPDR--FGGVKVAIVSLLVET-VGLLLL----WL----A--------------PTAWVALAGAALTGAGCSLIF 320 (392)
T ss_pred HHHHHHHHHh--cCCCeehHHHHHHHH-HHHHHH----HH----c--------------ccHHHHHHHHHHHHHHHHhHH
Confidence 9999999999 788887665543331 111111 10 0 111223445566777777666
Q ss_pred HHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 369 SMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 369 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
+.......+.++ +++++++.|+++....++.+++-.+..
T Consensus 321 ~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~ig~~~~g 359 (392)
T PRK12382 321 PALGVEVVKRVP-SQVRGTALGGYAAFQDIAYGVSGPLAG 359 (392)
T ss_pred HHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666677763 456699999999988888888766554
No 26
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.84 E-value=1.5e-18 Score=175.70 Aligned_cols=303 Identities=13% Similarity=0.006 Sum_probs=174.8
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhccc-----chHHHHHHHHHHhhhhhH
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHK-----HQAFAIAAGAILGIGAGL 130 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~-----~~~~li~~r~l~G~g~g~ 130 (471)
++...+...+..+....+++++.|+++||+|||++++++.+.+.+...........+ +.+.+++.|++.|++.+.
T Consensus 49 s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 128 (399)
T PRK05122 49 SAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESL 128 (399)
T ss_pred cHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHh
Confidence 455566777788888899999999999999999999999987765332222211122 456789999999999999
Q ss_pred HHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccC-CC
Q 012075 131 LWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILP-PG 209 (471)
Q Consensus 131 ~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~-p~ 209 (471)
..++...++.|..|+++||++++++......|..+|+.++..+... .+|++ .++... .+..+..++.++ |+
T Consensus 129 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~----~g~~~-~~~~~~---~~~~~~~~~~~~~~~ 200 (399)
T PRK05122 129 AGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW----GGLAG-LGLLIM---LLALLGLLLARPRPA 200 (399)
T ss_pred hcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc----ccHHH-HHHHHH---HHHHHHHHHHhcCCC
Confidence 9888888889999999999999999999999999999987433221 12322 122211 112222222222 22
Q ss_pred ccccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHhHhhhccccccccccccchhhhHHHHHHHHHHHHh
Q 012075 210 RVIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNFFYSYQFNNVNGLQFNLRTRGLNNVFYWGAQMLGS 289 (471)
Q Consensus 210 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~~~~i~~i~g~ 289 (471)
.. +++ +++++.++.+++.+ ........-...+.. ...+. +.+... .+....+.....++++.+++.
T Consensus 201 ~~-~~~------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 266 (399)
T PRK05122 201 VP-PVK------GERLPFRRVLGRVW----PYGMGLALASIGFGT-IATFI-TLYYAA-RGWDGAALALTLFGVAFVGAR 266 (399)
T ss_pred CC-CCC------ccchhHHHHHHHHH----HHHHHHHHHHHHHHH-HHHHH-HHHHHH-cccccchHHHHHHHHHHHHHH
Confidence 11 000 01112222222111 111111000001111 11111 111111 121233444556788888999
Q ss_pred hhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHH
Q 012075 290 VGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQS 369 (471)
Q Consensus 290 ~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 369 (471)
++.+++.|| +|||+....+...+ .+.... ... . ++.....+..++.|++.+...+
T Consensus 267 ~~~g~l~~r--~~~~~~~~~~~~~~-~~~~~~----~~~----~--------------~~~~~~~~~~~l~G~~~~~~~~ 321 (399)
T PRK05122 267 LLFGNLINR--LGGLRVAIVSLLVE-ILGLLL----LWL----A--------------PSPWMALIGAALTGFGFSLVFP 321 (399)
T ss_pred HHHHHHHHH--hccHHHHHHHHHHH-HHHHHH----HHH----h--------------ccHHHHHHHHHHHHHhHHHHHH
Confidence 999999999 77887554443322 111111 110 0 1112234455677777776666
Q ss_pred HHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhh
Q 012075 370 MVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQV 406 (471)
Q Consensus 370 ~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~ 406 (471)
.......+..+ +++++++.++++....++.+++-.+
T Consensus 322 ~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~~~~ 357 (399)
T PRK05122 322 ALGVEAVKRVP-PQNRGAALGAYSVFLDLSLGITGPL 357 (399)
T ss_pred HHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555556653 4566899999998888887665444
No 27
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.84 E-value=5.1e-18 Score=170.46 Aligned_cols=313 Identities=14% Similarity=0.053 Sum_probs=188.4
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++...+...+....+..++++++|+++||+|||+.+.++.++..+..... ..+++.+.+++.|++.|++.+...+..
T Consensus 38 s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~g~~~~~~~~~~ 114 (385)
T TIGR00710 38 PASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL---ALSNNIETLLVLRFVQAFGASAGSVIS 114 (385)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH---HHHccHHHHHHHHHHHHcchhHHHHHH
Confidence 45555666777778888899999999999999999999988766533322 235788999999999999999999999
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCC
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDD 215 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~ 215 (471)
..++.|+.|+++|++.+++.+....+|..+|+.++..+... .+|++. ++...++..+..+...+..|+++. +++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 188 (385)
T TIGR00710 115 QALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW----LSWHAI-FAFLSLAGILLSALIFFILPETLP-YEA 188 (385)
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCHHHH-HHHHHHHHHHHHHHHHHhCCCCCC-Ccc
Confidence 99999999999999999999999999999999887433221 123332 223233333333333333332211 111
Q ss_pred CCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhH-hHhh--hccccccc--cccccchhhhHHHHHHHHHHHHhh
Q 012075 216 GTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASN-FFYS--YQFNNVNG--LQFNLRTRGLNNVFYWGAQMLGSV 290 (471)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~~~s--~~~~~~~~--~~~~~~~~~l~~~~~~i~~i~g~~ 290 (471)
+++.++..++..+.+++|+++.......... ..+. ...+.+.. .+++..+.++.....+++.+++.+
T Consensus 189 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 260 (385)
T TIGR00710 189 --------RIQISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGF 260 (385)
T ss_pred --------cCCHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0111122233334456666544332222111 1111 11122222 233444556666778889999999
Q ss_pred hhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHH
Q 012075 291 GIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSM 370 (471)
Q Consensus 291 ~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 370 (471)
+.+++.|| +|||+....+...+.. ...... . .. . . .. ..+.......++.|++.+...+.
T Consensus 261 ~~g~l~~~--~~~~~~~~~~~~~~~~-~~~~~~--~--~~-~---------~-~~--~~~~~~~~~~~~~g~~~~~~~~~ 320 (385)
T TIGR00710 261 LNGRFIKK--WGAKSLLRMGLILFAV-SAVLLE--I--TA-I---------L-GL--GSWAMIIGPMMFVGIGNSMISSI 320 (385)
T ss_pred HHHHHHHh--cCHHHHHHHHHHHHHH-HHHHHH--H--HH-H---------h-cc--chHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 7888876665443321 111111 0 00 0 0 00 11222344455667777776666
Q ss_pred HHHHHHHhcCCchhhhHHHHHHHHHHHH-HHHHHhhhc
Q 012075 371 VYWVIGALADDSETLSRYSGFYKGVQSA-GAAVAWQVD 407 (471)
Q Consensus 371 ~~~~i~~~~~~~~~~~~~~~~~~~~~s~-g~~i~~~~~ 407 (471)
......|..+ ++++++.++++..... +...+..++
T Consensus 321 ~~~~~~~~~~--~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 321 AMAYALEDFP--HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHhccCc--ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 6656566553 3457888888877643 444444443
No 28
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.84 E-value=1.8e-18 Score=179.17 Aligned_cols=238 Identities=13% Similarity=-0.000 Sum_probs=137.4
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEG 136 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~ 136 (471)
+...+...+..+.+..+++++.|+++||+|||+.+.++.+...+..... ..+++.+.++++|++.|++.+... ...
T Consensus 70 ~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~---~~~~s~~~l~~~r~l~G~~~~~~~-~~~ 145 (476)
T PLN00028 70 KSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCM---SLVSSATGFIAVRFFIGFSLATFV-SCQ 145 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH---HHhcCHHHHHHHHHHHHHHHHhhH-HHH
Confidence 4444444556667777889999999999999999999887766533222 335788999999999999988654 345
Q ss_pred hhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhh----cc-CCCccccccchhHHHHHHHHHHHHHHHhccCCCcc
Q 012075 137 AIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILN----YN-RNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRV 211 (471)
Q Consensus 137 ~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~ 211 (471)
.+++|+.|+++||+++|+.....++|..+++.+...+. .. ..+..+||+.++ +..++.++..++..++.++.+.
T Consensus 146 ~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~-i~g~l~l~~~l~~~~~~~~~p~ 224 (476)
T PLN00028 146 YWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFF-VPGLLHIIMGILVLTLGQDLPD 224 (476)
T ss_pred HHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHH-HHHHHHHHHHHHHHHHcCcCCC
Confidence 67899999999999999998877777777765542111 00 000124554433 3333333333333333221111
Q ss_pred ccCCCCccc-cccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhH-hHhh--hccccccc--cccccchhhhHHHHHHHHH
Q 012075 212 IRDDGTHCT-NIKYSNVSTEITQVLKLFSNWKMLLIFPASWASN-FFYS--YQFNNVNG--LQFNLRTRGLNNVFYWGAQ 285 (471)
Q Consensus 212 ~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~~~s--~~~~~~~~--~~~~~~~~~l~~~~~~i~~ 285 (471)
.+.++.+.+ ..++++..+ ...+.+++++.+++....+... ..+. ...+.+.. .+++....+......+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~ 301 (476)
T PLN00028 225 GNYRELKKSGTMPKDSFSK---VLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMN 301 (476)
T ss_pred CchhhHHhcCccccccHHH---HHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 000000000 001112222 2223456666554443322211 1111 11133322 2344445566677788999
Q ss_pred HHHhhhhhhhcccCCCCcc
Q 012075 286 MLGSVGIGYIFDFSFPTRR 304 (471)
Q Consensus 286 i~g~~~~g~l~D~~~~gRr 304 (471)
+++.++.|+++|| ++||
T Consensus 302 ~ig~~~~G~lsDr--~~~r 318 (476)
T PLN00028 302 LFARPAGGYLSDV--AARR 318 (476)
T ss_pred HHHHhhhHHHHHH--HHHh
Confidence 9999999999999 5655
No 29
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.84 E-value=6.1e-18 Score=171.10 Aligned_cols=305 Identities=12% Similarity=0.070 Sum_probs=183.6
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
.++...+...+.......+++++.|+++||+|||+.++++.+++.+..... ..+++.+.+++.|++.|++.+..++.
T Consensus 52 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~G~~~g~~~~~ 128 (394)
T PRK10213 52 ISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLV---SFANSFSLLLIGRACLGLALGGFWAM 128 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHH---HHHChHHHHHHHHHHHHHhhHHHHHH
Confidence 345555666677777788899999999999999999999999876633222 33688999999999999999999999
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccC
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRD 214 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~ 214 (471)
...++.|+.|+++|++++++++...++|..+||.++..+... .+|++..+ ...++.++..+...... |+.. ++
T Consensus 129 ~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~----~gw~~~f~-~~~~l~~~~~l~~~~~~-p~~~-~~ 201 (394)
T PRK10213 129 SASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL----IGWRNVFN-AAAVMGVLCIFWIIKSL-PSLP-GE 201 (394)
T ss_pred HHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----cCHHHHHH-HHHHHHHHHHHHHHHHC-CCCC-cc
Confidence 999999999999999999999999999999999997444321 23444333 22222222221111112 2211 10
Q ss_pred CCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHh--Hh--Hhhhccccccc-cccccchhhhHHHHHHHHHHHHh
Q 012075 215 DGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWAS--NF--FYSYQFNNVNG-LQFNLRTRGLNNVFYWGAQMLGS 289 (471)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~--~~--~~s~~~~~~~~-~~~~~~~~~l~~~~~~i~~i~g~ 289 (471)
+ ++. . ++.++.+++|+++......+.. .. .+.+..+.+.. .+++....++.....+++.+++.
T Consensus 202 ~--------~~~-~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~ 269 (394)
T PRK10213 202 P--------SHQ-K---QNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGT 269 (394)
T ss_pred c--------ccc-h---hHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHH
Confidence 0 000 1 1123445677665443322211 11 11221122221 24454456677777889999999
Q ss_pred hhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHH
Q 012075 290 VGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQS 369 (471)
Q Consensus 290 ~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 369 (471)
++.+++.|| .+|+. ...+......+..... . . . .+........+++|++....++
T Consensus 270 ~~~~~l~~r--~~~~~-l~~~~~~~~~~~~~l~----~-~---~--------------~~~~~~~~~~~l~G~~~~~~~~ 324 (394)
T PRK10213 270 SLSSFILKR--SVKLA-LAGAPLVLAVSALVLT----L-W---G--------------SDKIVATGVAIIWGLTFALVPV 324 (394)
T ss_pred HHHHHHHhc--cchhH-HHHHHHHHHHHHHHHH----H-H---h--------------hhHHHHHHHHHHHHHHHHhhhH
Confidence 999999998 33432 2222222111111111 0 0 0 1112234456667777777766
Q ss_pred HHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 370 MVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 370 ~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
.....+.+..++ +.++..+....+.++|..++..+..
T Consensus 325 ~~~~~~~~~~~~--~~~~~~~~~~~~~~lg~~~G~~l~G 361 (394)
T PRK10213 325 GWSTWITRSLAD--QAEKAGSIQVAVIQLANTCGAAIGG 361 (394)
T ss_pred HHHHHHHHHCcc--cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666566665533 2245555566666777777766554
No 30
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.83 E-value=1.2e-18 Score=176.18 Aligned_cols=322 Identities=12% Similarity=0.069 Sum_probs=185.3
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
.++...+...+.......++.++.|+++||+|||++++++.++..+..... ..+++++.+++.|++.|++.+..++.
T Consensus 44 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~G~~~~~~~~~ 120 (405)
T TIGR00891 44 LTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLAC---GFAPGYITMFIARLVIGIGMGGEYGS 120 (405)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH---HHhccHHHHHHHHHHHHhhhhhhhHH
Confidence 344555666777788889999999999999999999999988766533222 33688999999999999999999999
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCcc--c
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRV--I 212 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~--~ 212 (471)
...++.|..|+++|+++++++.....+|.++|+.+...+....+ .+|++.. +...+...+. ++.....|+++. +
T Consensus 121 ~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~--~~w~~~f-~~~~~~~~~~-~~~~~~~~~~~~~~~ 196 (405)
T TIGR00891 121 SAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWG--DGWRALF-FISILPIIFA-LWLRKNIPEAEDWKE 196 (405)
T ss_pred HHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--ccHHHHH-HHHHHHHHHH-HHHHHhCCCChhHHH
Confidence 99999999999999999999999999999999988744432211 1243322 2222112211 122222232211 1
Q ss_pred cCCCCcccc-------ccCCCHHHHHH----HHHHHhcchh--HHHHHHHHHHhHhHh---hhccccccc--cccccchh
Q 012075 213 RDDGTHCTN-------IKYSNVSTEIT----QVLKLFSNWK--MLLIFPASWASNFFY---SYQFNNVNG--LQFNLRTR 274 (471)
Q Consensus 213 r~~~~~~~~-------~~~~~~~~~~~----~~~~~~~~~~--~ll~~~~~~~~~~~~---s~~~~~~~~--~~~~~~~~ 274 (471)
++++++... .+++..++..+ +..+...+++ +..+.......++.. ...++.+.. .+++..+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~ 276 (405)
T TIGR00891 197 KHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTV 276 (405)
T ss_pred HhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHH
Confidence 111100000 00000111111 1111111111 111111111111110 111122222 23344455
Q ss_pred hhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHH
Q 012075 275 GLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPF 354 (471)
Q Consensus 275 ~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (471)
+......+++.+++.++.+++.|| +|||+....+...... .... .. . .. .......
T Consensus 277 ~~~~~~~~~~~~~g~~~~g~l~dr--~g~~~~~~~~~~~~~~---~~~~-~~--~--~~--------------~~~~~~~ 332 (405)
T TIGR00891 277 ANIVVFSNIGAIVGGCVFGFLGDW--LGRRKAYVCSLLAGQL---LIIP-VF--A--IG--------------ANVAVLG 332 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--hCchhhhHHHHHHHHH---HHHH-HH--H--hC--------------CchHHHH
Confidence 666677889999999999999999 7898866554332211 1110 01 0 00 1112223
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 355 VLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 355 ~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
+..++.++......+..+.++.|.++ ++++++++|+.+...+++..++..+..
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~g~~~~g 385 (405)
T TIGR00891 333 LGLFFQQMLVQGIWGILPKHLGEYFP-TDQRAAGLGFTYQLGNLGGALAPIIGA 385 (405)
T ss_pred HHHHHHHHHHccchhhHHHHHhhhCC-cchhHHHhhHHHHHHHHHHHHHHHHHH
Confidence 33344455555555566677888884 345689999998888888877776554
No 31
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.83 E-value=6.5e-19 Score=174.43 Aligned_cols=314 Identities=19% Similarity=0.257 Sum_probs=187.7
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++...+...+.......+++++.|+++||+|||+.+.++.++..+...... .++|.+.++++|++.|++.+..+++.
T Consensus 30 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~g~~~~~~~~~~ 106 (352)
T PF07690_consen 30 SPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA---FASNFWLLLIARFLLGIGSGFFSPAS 106 (352)
T ss_dssp TSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh---hhhhHHHHhhhccccccccccccccc
Confidence 444556667777777889999999999999999999999988776422222 23778899999999999999999999
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccC-CCccccC
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILP-PGRVIRD 214 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~-p~~~~r~ 214 (471)
..++.|+.|+++|++.+++.....++|..+|+.++..+. . ..+|++. +++..++..+..++..++.+ +++.+++
T Consensus 107 ~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~-~---~~~~~~~-~~~~~~~~~~~~il~~~~~~~~~~~~~~ 181 (352)
T PF07690_consen 107 NALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLI-S---YFGWRWA-FLISAILSLIAAILFILFLPEPPPPRER 181 (352)
T ss_dssp HHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-C---HCHHCCH-HHHHHHHHHHHHHHHHCCC---STTTT-
T ss_pred cccccccchhhhhhhccccccchhhhhhhcccchhhhhh-h---ccccccc-cccccchhhhhhhhHhhhhhhccccccc
Confidence 999999999999999999999999999999999974433 1 1235444 33334444444333223332 2211111
Q ss_pred CCCccccccCCCHHHHHHHHHHHh-cchhHHHHHHHHHHhH--h-Hhhhccccccc--cccc-cchhhhHHHHHHHHHHH
Q 012075 215 DGTHCTNIKYSNVSTEITQVLKLF-SNWKMLLIFPASWASN--F-FYSYQFNNVNG--LQFN-LRTRGLNNVFYWGAQML 287 (471)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ll~~~~~~~~~--~-~~s~~~~~~~~--~~~~-~~~~~l~~~~~~i~~i~ 287 (471)
++++ + ++++.++++++.++.+ ++|.++......+... . ......+.+.. .+++ ..+.+......+++.++
T Consensus 182 ~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (352)
T PF07690_consen 182 ESPK-E--SESKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGII 258 (352)
T ss_dssp -SST-T--TT--HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHH
T ss_pred cccc-c--cccccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHH
Confidence 1100 0 0000111111211222 2332321111111111 1 11111133322 2333 23445556677888888
Q ss_pred HhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHH
Q 012075 288 GSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMF 367 (471)
Q Consensus 288 g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 367 (471)
+.++.+++.|| +++|+........+. +.... +... ... .+.....+..++.|++.+..
T Consensus 259 ~~~~~~~l~~~--~~~~~~~~~~~~~~~-~~~~~----~~~~------------~~~---~~~~~~~~~~~~~g~~~~~~ 316 (352)
T PF07690_consen 259 GSLLAGRLSDR--FGRRRRLLIAILLLI-LGALG----LLLL------------PFS---SSPVWLIIALFLIGFGFGIV 316 (352)
T ss_dssp HHHHHHHHHHH--TTCHHHHHHHHHHHH-HHHHH----HCCS------------HHH---CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--cCcHHHHHHHHHHHH-HHHHH----HHHH------------HHh---hhHHHHHHHHHHHHHHHHHH
Confidence 89999999999 777665544433221 11111 1000 001 11122445666788888888
Q ss_pred HHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHH
Q 012075 368 QSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVA 403 (471)
Q Consensus 368 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~ 403 (471)
.+....++.+..+ +++++++.|+.+...+++..++
T Consensus 317 ~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~~~~ig 351 (352)
T PF07690_consen 317 FPILFSLIQELVP-PEYRGTAFGLFNSIGSLGGIIG 351 (352)
T ss_dssp CHHHHHHHHCCCH-TCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHC
Confidence 8888888888883 3456899999999888887764
No 32
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.83 E-value=1.4e-18 Score=180.96 Aligned_cols=116 Identities=13% Similarity=0.171 Sum_probs=97.0
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
.++...+...+..+.+..+++++.|+++||+|||+.++++.++..+..... ..++|.+.++++|++.|++.+...+.
T Consensus 52 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~G~~~~~~~~~ 128 (496)
T PRK03893 52 LTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLAC---GFAPGYWTLFIARLVIGMGMAGEYGS 128 (496)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555666777778888899999999999999999999987766533222 23578999999999999999998888
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
...++.|..|+++|++.++++.....+|..+|+.+...+
T Consensus 129 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 167 (496)
T PRK03893 129 SATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLV 167 (496)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999887433
No 33
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.83 E-value=2.5e-18 Score=179.11 Aligned_cols=352 Identities=13% Similarity=0.028 Sum_probs=203.9
Q ss_pred hhHHHHHHHHHHhhhhh----hhHhhhhcCCCCCCChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHH
Q 012075 25 PLVQVCLIGLVCFCCPG----MFNALSGMGGGGQVDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVL 100 (471)
Q Consensus 25 ~~~~~~~~~~~~f~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~ 100 (471)
+|..+..+.+..|+... ...+...+..+.+.++...+...+...++.+++.++.|+++||+|||+.++++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGL 83 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 44455555555554431 11223333333333444455666666677777889999999999999999999998876
Q ss_pred HHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccC-CCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCC
Q 012075 101 YAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSY-PPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNE 179 (471)
Q Consensus 101 ~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~-~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~ 179 (471)
....+ +.++|.+.++++|+++|+|.+...+.....+.+. .|+++|++++|++.....+|..+||.++..+...
T Consensus 84 ~~~~~---~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~--- 157 (495)
T PRK14995 84 ASLAA---AFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH--- 157 (495)
T ss_pred HHHHH---HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---
Confidence 43332 3478999999999999999999877666656454 5789999999999999999999999997444322
Q ss_pred ccccccchhHHHHHHHHHHHHHHHhccCCCccccCCCCccc-------------------cccCCCHH------------
Q 012075 180 AVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDDGTHCT-------------------NIKYSNVS------------ 228 (471)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~~~~~~-------------------~~~~~~~~------------ 228 (471)
.+|+|.+++ ...+..+..++..+..|+++.+++++.+.. .....+.+
T Consensus 158 -~gwr~~f~i-~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (495)
T PRK14995 158 -FYWGSVFLI-NVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALL 235 (495)
T ss_pred -CChHHHHHH-HHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHH
Confidence 346665443 222333333333344443221111100000 00000000
Q ss_pred ------HHHHH-----HHHHhcchhHHHHHHHHHHhHh-Hh--hhccccccc--cccccchhhhHHHHHHHHHHHHhhhh
Q 012075 229 ------TEITQ-----VLKLFSNWKMLLIFPASWASNF-FY--SYQFNNVNG--LQFNLRTRGLNNVFYWGAQMLGSVGI 292 (471)
Q Consensus 229 ------~~~~~-----~~~~~~~~~~ll~~~~~~~~~~-~~--s~~~~~~~~--~~~~~~~~~l~~~~~~i~~i~g~~~~ 292 (471)
++.+. -++.+++|.+.......+.... .+ .+.++.+.+ .+++..+.++......++..++.++.
T Consensus 236 l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~ 315 (495)
T PRK14995 236 LGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIA 315 (495)
T ss_pred HHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0123444443332222222211 11 111133322 23455567787888899999999999
Q ss_pred hhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHHHH
Q 012075 293 GYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSMVY 372 (471)
Q Consensus 293 g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 372 (471)
|++.|| +|||+....+.... .++.... ... .. + .+........++.|++.+...+...
T Consensus 316 g~l~~r--~g~~~~~~~g~~~~-~~~~~~l----~~~---~~-------~-----~~~~~~~~~~~l~G~g~g~~~~~~~ 373 (495)
T PRK14995 316 GILVSR--LGLRLVATGGMALS-ALSFYGL----AMT---DF-------S-----TQQWQAWGLMALLGFSAASALLAST 373 (495)
T ss_pred HHHHHH--cCchHHHHHHHHHH-HHHHHHH----HHh---cC-------C-----CchHHHHHHHHHHHHhHHHHHHHHH
Confidence 999999 78887665554333 1111111 101 10 1 1222234556677888777776666
Q ss_pred HHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 012075 373 WVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVD 407 (471)
Q Consensus 373 ~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~ 407 (471)
....+.. ++++.+.+.++++..+.+|.+++-.+.
T Consensus 374 ~~~~~~~-~~~~~g~~~~~~~~~~~lG~~~G~ai~ 407 (495)
T PRK14995 374 SAIMAAA-PPEKAAAAGAIETMAYELGAGLGIAIF 407 (495)
T ss_pred HHHHhcC-CHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 5555555 345568889999998888888776543
No 34
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.83 E-value=1.1e-18 Score=174.23 Aligned_cols=312 Identities=13% Similarity=0.026 Sum_probs=183.1
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++...+...+..+.+..++++++|+++||+|||+++.++.++..+.... .+.++|.+.++++|++.|++.+..+...
T Consensus 36 s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 112 (377)
T TIGR00890 36 GVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTF---YAIADSLAALYLTYGLASAGVGIAYGIA 112 (377)
T ss_pred CHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHH---HHHHHHHHHHHHHHHHHhHHHHHHHHhH
Confidence 4556677788888889999999999999999999999998877653322 2346889999999999999999887777
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHh-ccCCCccccC
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLV-ILPPGRVIRD 214 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-l~~p~~~~r~ 214 (471)
..++.|+.| ++||++++++.....+|..+++.+....... .+|++. ++...++..+..+...+ .++|++.+++
T Consensus 113 ~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (377)
T TIGR00890 113 LNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINL----EGVPAA-FIYMGIIFLLVIVLGAFLIGYPPGQLIK 186 (377)
T ss_pred HHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhc----ccHHHH-HHHHHHHHHHHHHHHHHheecCchhccc
Confidence 777777765 6899999999999999887654443222211 234443 33333333333323333 3222221111
Q ss_pred CCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHhH---hhhccccccc-cccccchhhhHHHHHHHHHHHHhh
Q 012075 215 DGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNFF---YSYQFNNVNG-LQFNLRTRGLNNVFYWGAQMLGSV 290 (471)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~---~s~~~~~~~~-~~~~~~~~~l~~~~~~i~~i~g~~ 290 (471)
++. +.++.. ++..+.+++|+.+......+..... ....++.+.. .+.+..+.+......+++.+++.+
T Consensus 187 ~~~-----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (377)
T TIGR00890 187 TNI-----EVSVKD---YTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRP 258 (377)
T ss_pred cCc-----ccchhh---hhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 000 000001 1222345566554433322222111 1111112211 122333445666778889999999
Q ss_pred hhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHH
Q 012075 291 GIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSM 370 (471)
Q Consensus 291 ~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 370 (471)
+.|++.|| +|||+....+..++. +..... . . .+ + ......+...++.++..+...+.
T Consensus 259 ~~g~l~dr--~g~~~~~~~~~~~~~-~~~~~~----~-~--~~--------~-----~~~~~~~~~~~~~g~~~g~~~~~ 315 (377)
T TIGR00890 259 FLGALSDK--IGRQKTMSIVFGISA-VGMAAM----L-F--IP--------M-----LNDVLFLATVALVFFTWGGTISL 315 (377)
T ss_pred HHHHHHHH--HhhhhhhhHHHHHHH-HHHHHH----H-H--cc--------c-----chhHHHHHHHHHHHHHhccchhc
Confidence 99999999 789887655544331 111111 0 0 00 1 11111222333445555555555
Q ss_pred HHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 371 VYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 371 ~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
...++.|.++ +++++++.|+++....+|..++..+..
T Consensus 316 ~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~~~~~~g 352 (377)
T TIGR00890 316 FPSLVSDIFG-PANSAANYGFLYTAKAVAGIFGGLIAS 352 (377)
T ss_pred cHHHHHHHhh-hhhhhhHhHHHHHHHHHHHHHHHHHHH
Confidence 5667788873 345689999999888888887776544
No 35
>PRK09952 shikimate transporter; Provisional
Probab=99.83 E-value=2e-18 Score=177.16 Aligned_cols=102 Identities=16% Similarity=0.170 Sum_probs=86.4
Q ss_pred HHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchH--------HHHHHHHHHhhhhhHHHhhhhh
Q 012075 66 ALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQA--------FAIAAGAILGIGAGLLWAAEGA 137 (471)
Q Consensus 66 ~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~--------~li~~r~l~G~g~g~~~~~~~~ 137 (471)
+.+.+..+++++.|+++||+|||+++.++.+++.+..... +.+++++ .++++|+++|++.|..+++...
T Consensus 72 ~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~ 148 (438)
T PRK09952 72 VGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALI---GLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAAL 148 (438)
T ss_pred HHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH---hcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHH
Confidence 4455667888999999999999999999998887644332 3367765 5889999999999999999999
Q ss_pred hhccCCCCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 138 IMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 138 ~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
++.|+.|+++||+..+..+....+|.+++..+.
T Consensus 149 ~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~ 181 (438)
T PRK09952 149 LAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLV 181 (438)
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988887664
No 36
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.83 E-value=4.4e-18 Score=174.30 Aligned_cols=105 Identities=18% Similarity=0.173 Sum_probs=87.8
Q ss_pred HHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccch--------HHHHHHHHHHhhhhhHHHhh
Q 012075 63 ANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQ--------AFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 63 ~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~--------~~li~~r~l~G~g~g~~~~~ 134 (471)
..+..+.+..++++++|+++||+|||+++.++.+.+.+...... .++++ ..+++.|+++|+|.|..++.
T Consensus 68 ~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~ 144 (432)
T PRK10406 68 VFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIA---CLPGYETIGTWAPALLLLARLFQGLSVGGEYGT 144 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHh---hcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhh
Confidence 34455666678999999999999999999999998876544332 24554 36899999999999999999
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
..++++|+.|+++||++.++.+.....|..+++++.
T Consensus 145 ~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~ 180 (432)
T PRK10406 145 SATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVV 180 (432)
T ss_pred HHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888888888887765
No 37
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.83 E-value=1.4e-18 Score=178.97 Aligned_cols=320 Identities=11% Similarity=0.069 Sum_probs=185.0
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHH-HHHHHhhhhhHHHhhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIA-AGAILGIGAGLLWAAE 135 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~-~r~l~G~g~g~~~~~~ 135 (471)
+...+...+..+....++.++.|+++||+|||+.++.+.++..+....+ +.+++.+.+++ .|++.|++.+..++..
T Consensus 53 ~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~l~G~~~~~~~~~~ 129 (455)
T TIGR00892 53 YSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILA---SFSSNVIELYLTAGFITGLGLAFNFQPS 129 (455)
T ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHH---HHhhhHHHHHHHHHHHHHhcchhhhhHH
Confidence 4444555666666677888999999999999999999987766533222 33577887765 5799999999876666
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCcc---c
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRV---I 212 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~---~ 212 (471)
..++.++. +++|++++|+.+....+|..+++.+...+... .+|++.++ +..++.++..+..++++++... .
T Consensus 130 ~~~~~~~~-~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~----~gwr~~f~-~~~~~~~~~~v~~~~~~~~~~~~~~~ 203 (455)
T TIGR00892 130 LTMLGKYF-YRRRPLANGLAMAGSPVFLSTLAPLNQYLFES----FGWRGSFL-ILGGLLLHCCVCGALMRPVGPSQRVS 203 (455)
T ss_pred HHHHHHHH-HhhHHHHHHHHHhcccHHHHHHHHHHHHHHHH----hChHHHHH-HHHHHHHHHHHHHHHhCCCCcccccc
Confidence 67777876 58999999999999999999888876333221 23554433 3333333333333344432111 0
Q ss_pred cC---CCCc-c-cccc--CCCHHHHHHHH--HHHhcchhHHHHHHHHHHhHhH----hhhccccccc-cccccchhhhHH
Q 012075 213 RD---DGTH-C-TNIK--YSNVSTEITQV--LKLFSNWKMLLIFPASWASNFF----YSYQFNNVNG-LQFNLRTRGLNN 278 (471)
Q Consensus 213 r~---~~~~-~-~~~~--~~~~~~~~~~~--~~~~~~~~~ll~~~~~~~~~~~----~s~~~~~~~~-~~~~~~~~~l~~ 278 (471)
++ ++.+ . ..++ ++...++.++. ++.+++|+++......+..++. +.+. +.+.. .+++....++..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l-~~~~~~~g~s~~~~g~~~ 282 (455)
T TIGR00892 204 KSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFL-VPYAKDKGVDEYEAAFLL 282 (455)
T ss_pred cccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHH-HHHHHHcCCCHHHHHHHH
Confidence 10 0000 0 0000 00111112211 2445667665544333322221 1111 22221 233444556666
Q ss_pred HHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHH
Q 012075 279 VFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYF 358 (471)
Q Consensus 279 ~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (471)
...+++.+++.++.+++.||++.++|+...++.... ..++.... .. .. .++....+..+
T Consensus 283 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~-~~~l~~ll--~~----~~--------------~~~~~~~i~~~ 341 (455)
T TIGR00892 283 SIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALL-FNGLTHLL--CA----LA--------------GDYTGLVIYCI 341 (455)
T ss_pred HHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHH-HHHHHHHH--HH----Hh--------------chHHHHHHHHH
Confidence 677888999999999999974333333222221111 11111100 00 00 12223445566
Q ss_pred HHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 359 CYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 359 ~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
++|++.+...+..+.++.+..+ ++++++++|+++...++|..++-.+..
T Consensus 342 ~~G~~~g~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~igp~i~G 390 (455)
T TIGR00892 342 FFGLSFGSVGALLFEVLMDLVG-AQRFSSAVGLVTIVECCAVLIGPPLAG 390 (455)
T ss_pred HHHHHhchHHHHHHHHHHHHhh-HHHHhhHHhHHHHHHHHHHHcccccee
Confidence 7788877777777888888873 345689999999998888888877654
No 38
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.82 E-value=1.7e-18 Score=172.87 Aligned_cols=317 Identities=14% Similarity=0.072 Sum_probs=175.7
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhccc-chHHHHHHHHHHhhhhhHHHh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHK-HQAFAIAAGAILGIGAGLLWA 133 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~-~~~~li~~r~l~G~g~g~~~~ 133 (471)
.++...+...+....+..++++++|+++||+|||+.++++.++..+..... ..++ +++.++++|++.|++.+. ..
T Consensus 34 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~~g~~~~~-~~ 109 (366)
T TIGR00886 34 LSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA---GLAVQSYSVLLLLRLFIGIAGGS-FA 109 (366)
T ss_pred CCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH---HHHhhhHHHHHHHHHHHHHhchh-hH
Confidence 445556667777788888999999999999999999999998776643332 2356 899999999999999765 45
Q ss_pred hhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhc----cCC--CccccccchhHHHHHHHHHHHHHHHhccC
Q 012075 134 AEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNY----NRN--EAVSVNDGTYIGFMCFMSAGALLSLVILP 207 (471)
Q Consensus 134 ~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~l~~ 207 (471)
....+++|+.|+++|++.++++....++|..+|+.+...+.. ..+ +..+|++..++...++..+..++.+++.+
T Consensus 110 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 189 (366)
T TIGR00886 110 SCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGA 189 (366)
T ss_pred hHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcc
Confidence 567788999999999999999998888888877776532221 100 01246665534333333322222223322
Q ss_pred CCccccCCCCccc-c-ccCCCHHHHHHHHHHHhcchhHHHHHHHHHHh-HhHh--hhcccccccc--ccccchhhhHHHH
Q 012075 208 PGRVIRDDGTHCT-N-IKYSNVSTEITQVLKLFSNWKMLLIFPASWAS-NFFY--SYQFNNVNGL--QFNLRTRGLNNVF 280 (471)
Q Consensus 208 p~~~~r~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~~~--s~~~~~~~~~--~~~~~~~~l~~~~ 280 (471)
+++.+++++++.. . .+....++..++.++.+++|+.+......+.. ...+ ....+.+... +++..+.++....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 269 (366)
T TIGR00886 190 DTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASL 269 (366)
T ss_pred cCCcccccchhcccccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 2211111111100 0 00000011122344455666654443322221 1111 1111233322 2334445555666
Q ss_pred HHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHH
Q 012075 281 YWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCY 360 (471)
Q Consensus 281 ~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (471)
..+..+++.++.|++.|| +|||+....+..... +...... + . .. + . .+....+....+.
T Consensus 270 ~~~~~~~~~~~~g~l~~r--~g~~~~~~~~~~~~~-~~~~~~~--~--~--~~--------~-~---~~~~~~~~~~~~~ 328 (366)
T TIGR00886 270 GGLLGSLARPLGGAISDR--LGGARKLLMSFLGVA-MGAFLVV--L--G--LV--------S-P---LSLAVFIVLFVAL 328 (366)
T ss_pred HHHHHHHHhhccchHHHh--hccchhHHHHHHHHH-HHHHHHH--h--c--CC--------C-c---chHHHHHHHHHHH
Confidence 788889999999999999 788876554433221 1111110 0 0 00 0 0 0121122222333
Q ss_pred HhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHH
Q 012075 361 GLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSA 398 (471)
Q Consensus 361 g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~ 398 (471)
.+..+..++..+.+++++.+ ++.+++.|+.+.+.++
T Consensus 329 ~~~~g~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~ 364 (366)
T TIGR00886 329 FFFSGAGNGSTFALVPHIFR--RATGAVSGLVGAIGNL 364 (366)
T ss_pred HHHhccccchhhhcchhhch--hhcccHHHHHHHhccC
Confidence 33333444456667777774 4557888877766544
No 39
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.82 E-value=4.3e-18 Score=176.08 Aligned_cols=232 Identities=16% Similarity=0.067 Sum_probs=144.5
Q ss_pred hhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhh
Q 012075 59 AANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAI 138 (471)
Q Consensus 59 ~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~ 138 (471)
..+...+..+.++.++++++|+++||+|||+.+.++.++..+....... +...+.+.+++.|+++|++.+..+++...+
T Consensus 77 ~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~-~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~ 155 (465)
T TIGR00894 77 LQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPW-AAGGGIALVVFCRVIQGLAQGSVSPATHKI 155 (465)
T ss_pred HhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHH-HHHcCchHHHHHHHHHHHhcccchhhHHHH
Confidence 3355566777788889999999999999999999998877654333221 123567789999999999999999999999
Q ss_pred hccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccC--CCccccCCC
Q 012075 139 MTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILP--PGRVIRDDG 216 (471)
Q Consensus 139 i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~--p~~~~r~~~ 216 (471)
+.|+.|+++||++++++.....+|..+|+.+...+.... .+|++..+ +..++.++..++.+++.+ |+..+++++
T Consensus 156 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~---~gw~~~f~-i~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 231 (465)
T TIGR00894 156 IVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW---GGWPMIFY-VFGIVGCAWSLLWFVFPADDPSIHPCISK 231 (465)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCCCeehh-hhhHHHHHHHHHHHHHhcCCcccCCCCCH
Confidence 999999999999999999999999999999874443210 14554433 333333333333333322 221111110
Q ss_pred Cccc------cc-c-CCCHHHHHHHHHHHhcchhHHHHHHHHHHhHhH---hhhcccccccc--ccccchhhhHHHHHHH
Q 012075 217 THCT------NI-K-YSNVSTEITQVLKLFSNWKMLLIFPASWASNFF---YSYQFNNVNGL--QFNLRTRGLNNVFYWG 283 (471)
Q Consensus 217 ~~~~------~~-~-~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~---~s~~~~~~~~~--~~~~~~~~l~~~~~~i 283 (471)
++.+ .+ + +++.+..+ .+.+++|+++......+...+. +...++.+... +++..+.++......+
T Consensus 232 ~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~ 308 (465)
T TIGR00894 232 FEKKYINSSLQGQKGSTRQSLPI---KAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYL 308 (465)
T ss_pred HHHHHHHhhcccccCCCCCCCCH---HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHH
Confidence 0000 00 0 00001112 2334566665544433332221 11112444322 3444456676667788
Q ss_pred HHHHHhhhhhhhccc
Q 012075 284 AQMLGSVGIGYIFDF 298 (471)
Q Consensus 284 ~~i~g~~~~g~l~D~ 298 (471)
+.+++.++.|++.||
T Consensus 309 ~~~i~~~~~g~l~d~ 323 (465)
T TIGR00894 309 FAWLCSIFAGYLADF 323 (465)
T ss_pred HHHHHHHHHHHHHHH
Confidence 899999999999998
No 40
>TIGR00895 2A0115 benzoate transport.
Probab=99.82 E-value=5.4e-18 Score=170.62 Aligned_cols=317 Identities=13% Similarity=0.114 Sum_probs=185.0
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++...+...+....+..+++++.|+++||+|||+.+.++.++..+..... ..+++.+.+++.|++.|++.+...+..
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~ 126 (398)
T TIGR00895 50 DPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLC---ALATNVTQLLILRFLAGLGLGGLMPNL 126 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHH---HHccchHHHHHHHHHHhcccccchhhH
Confidence 34445555666667778889999999999999999999987765533222 235788999999999999999999999
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHH-HhccCC-Ccccc
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLS-LVILPP-GRVIR 213 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~l~~p-~~~~r 213 (471)
.+++.|..|+++|++.++++.....+|..+|+.+...+... .+|++..++ ..++..+..++. .+++++ ++..+
T Consensus 127 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~----~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (398)
T TIGR00895 127 NALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV----FGWRSLFYV-GGIAPLLLLLLLMRFLPESIDFLVS 201 (398)
T ss_pred HHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc----ccceeehhh-hhhHHHHHHHHHHHhCCCCChHHHh
Confidence 99999999999999999999999999999999886333211 234443332 222222222222 233222 11111
Q ss_pred CCCCc-----------------cccccCCCHHHHHHHHHHHhcc----hhHHHHHHHHHHhHhH---hhhcccccc-ccc
Q 012075 214 DDGTH-----------------CTNIKYSNVSTEITQVLKLFSN----WKMLLIFPASWASNFF---YSYQFNNVN-GLQ 268 (471)
Q Consensus 214 ~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~----~~~ll~~~~~~~~~~~---~s~~~~~~~-~~~ 268 (471)
+++++ ...++++...+..++..+.+++ ++.+............ .....+.+. ..+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 281 (398)
T TIGR00895 202 KRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELG 281 (398)
T ss_pred cCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 10000 0000000001111222222222 2222211111111111 111112111 123
Q ss_pred cccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCC
Q 012075 269 FNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGS 348 (471)
Q Consensus 269 ~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (471)
++....++......++.+++.++.+++.|| +|||+.. .+..+...+.... .. . . .
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~-~~~~~~~~~~~~~----~~-~--~---------------~ 336 (398)
T TIGR00895 282 FSLSLAATGGALFNFGGVIGSIIFGWLADR--LGPRVTA-LLLLLGAVFAVLV----GS-T--L---------------F 336 (398)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cchHHHH-HHHHHHHHHHHHH----HH-H--h---------------h
Confidence 344445666777889999999999999999 7887422 2222211111111 00 0 0 0
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhh
Q 012075 349 DFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQV 406 (471)
Q Consensus 349 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~ 406 (471)
+........++.|++.+...+..+.++.+.++ +++++++.|+.+.+..++.+++..+
T Consensus 337 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~g~~~ 393 (398)
T TIGR00895 337 SPTLLLLLGAIAGFFVNGGQSGLYALMALFYP-TAIRATGVGWAIGIGRLGAIIGPIL 393 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11123455667788888888888888899884 4456889998888887777776554
No 41
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.82 E-value=8.2e-18 Score=171.19 Aligned_cols=228 Identities=13% Similarity=0.031 Sum_probs=147.1
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
.+....+...++.+.+++++.+++|+++||+|||++++.+.+++.+..... ..++|.+.++++|+++|++.+...+.
T Consensus 48 ~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~a~~~~~l~~~r~l~Gi~~~~~~~~ 124 (413)
T PRK15403 48 ADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAAT---LFTTSMTQFLIARFIQGTSICFIATV 124 (413)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHH---HHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777888889999999999999999999999999988776633322 34689999999999999999876666
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccC
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRD 214 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~ 214 (471)
...++.|..|+++|++.++++.....+|..+|+.++..+... .+|++. |++..++..+..+...+..|+++ +++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~----~gw~~~-f~~~~~~~~i~~~~~~~~lp~~~-~~~ 198 (413)
T PRK15403 125 GYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF----VHWKVL-FAIIAVMGLIAFVGLLLAMPETV-KRG 198 (413)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCHHHH-HHHHHHHHHHHHHHHHHhCCCCc-ccc
Confidence 778888999999999999999999999999999988544321 235543 33333333333333333333221 111
Q ss_pred CCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHh-Hhhh--cccccccc--ccccchhhhHHHHHHHHHHHHh
Q 012075 215 DGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNF-FYSY--QFNNVNGL--QFNLRTRGLNNVFYWGAQMLGS 289 (471)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~-~~s~--~~~~~~~~--~~~~~~~~l~~~~~~i~~i~g~ 289 (471)
++ +.+.++..++..+.+++|+++........... .+++ ..+.+... +++..+.++.......+.++++
T Consensus 199 ~~-------~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~ 271 (413)
T PRK15403 199 AV-------PFSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVAN 271 (413)
T ss_pred CC-------CCChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 10 11122223444455677877655443332221 1111 12333322 3344445666666677888888
Q ss_pred hhhhhhccc
Q 012075 290 VGIGYIFDF 298 (471)
Q Consensus 290 ~~~g~l~D~ 298 (471)
.+.+++.++
T Consensus 272 ~l~~~~~~~ 280 (413)
T PRK15403 272 AIVARFVKD 280 (413)
T ss_pred HHHHHHhcc
Confidence 777776654
No 42
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.82 E-value=8e-18 Score=168.91 Aligned_cols=242 Identities=13% Similarity=0.044 Sum_probs=155.7
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++...+...+....+..++.+++|+++||+|||+.+.++.++..+...... .+++.+.+++.|++.|++.+...+..
T Consensus 24 s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~l~g~~~~~~~~~~ 100 (377)
T PRK11102 24 SAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACA---LAQTIDQLIYMRFLHGLAAAAASVVI 100 (377)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHH---HHccHHHHHHHHHHHHHHHHHHHHHH
Confidence 455556667777788889999999999999999999999987766433332 25788999999999999999998888
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCC
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDD 215 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~ 215 (471)
..++.|+.|+++|++.+++.+....+|..+|+.++..+... .+|++. ++....+..+..++..+..|+++ ++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 174 (377)
T PRK11102 101 NALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW----FSWHAI-FWVLALAAILAAALVFFFIPETL-PKER 174 (377)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cChHHH-HHHHHHHHHHHHHHHHHhCCccC-cccc
Confidence 99999999999999999999999999999999987433221 134333 33333333333333333333221 1111
Q ss_pred CCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHh-Hhhhc--cccccc--cccccchhhhHHHHHHHHHHHHhh
Q 012075 216 GTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNF-FYSYQ--FNNVNG--LQFNLRTRGLNNVFYWGAQMLGSV 290 (471)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~-~~s~~--~~~~~~--~~~~~~~~~l~~~~~~i~~i~g~~ 290 (471)
+ ++.+.++..++..+.+++|+.+........... .+.+. .+.+.. .+++..+.++......++.+++.+
T Consensus 175 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~ 248 (377)
T PRK11102 175 R------QPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTI 248 (377)
T ss_pred c------CCCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 111222333333445566665443332222111 11111 011111 233444566677778889999999
Q ss_pred hhhhhcccCCCCccceeeehhhhH
Q 012075 291 GIGYIFDFSFPTRRKRGFVGIVVV 314 (471)
Q Consensus 291 ~~g~l~D~~~~gRr~~~~~g~~~~ 314 (471)
+.+++.|| +|||+....+...+
T Consensus 249 ~~g~l~~r--~g~~~~~~~~~~~~ 270 (377)
T PRK11102 249 INSRFVRR--VGALNMLRFGLWIQ 270 (377)
T ss_pred HHHHHHHH--hCHHHHHHHHHHHH
Confidence 99999999 78998776665443
No 43
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.82 E-value=5.5e-18 Score=175.95 Aligned_cols=322 Identities=15% Similarity=0.073 Sum_probs=194.8
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++...+...+....+..++.++.|+++||+|||+.++++.+++.+..... ..++|.+.++++|++.|++.+...+..
T Consensus 35 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~G~~~~~~~~~~ 111 (485)
T TIGR00711 35 SLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLC---GVAPNLELMIIFRVIQGFGGGPLIPLS 111 (485)
T ss_pred ChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHH---hCcCCHHHHHHHHHHHHhhhhhHHHHH
Confidence 34445566667777788889999999999999999999998877643322 346899999999999999999999999
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCC
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDD 215 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~ 215 (471)
..++.|+.|+++||++++++.....+|..+|+.++..+. . ..+|+|..++. ..+..+..++..+..|+++.++++
T Consensus 112 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~---~~~w~~~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 186 (485)
T TIGR00711 112 FSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWII-E---NYHWRWIFLIN-VPIGIIVVVVAFFILPRDKPAASE 186 (485)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhc-c---CcCceehhhhh-hHHHHHHHHHHHHHcCCccccccC
Confidence 999999999999999999999999999999999874332 2 13466554432 223333333333333322111111
Q ss_pred CCcc-----------------ccccCCCHH---------------------HHHH-----HHHHHhcchhHHHHHHHHHH
Q 012075 216 GTHC-----------------TNIKYSNVS---------------------TEIT-----QVLKLFSNWKMLLIFPASWA 252 (471)
Q Consensus 216 ~~~~-----------------~~~~~~~~~---------------------~~~~-----~~~~~~~~~~~ll~~~~~~~ 252 (471)
+.+. ...+++.+. ++.+ ...+.+++|++.......+.
T Consensus 187 ~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (485)
T TIGR00711 187 NFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSL 266 (485)
T ss_pred CCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHH
Confidence 0000 000000000 0000 00123444544333222222
Q ss_pred hHh---Hhhhcccccccc--ccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhh
Q 012075 253 SNF---FYSYQFNNVNGL--QFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLA 327 (471)
Q Consensus 253 ~~~---~~s~~~~~~~~~--~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~ 327 (471)
.++ ...+.++.+... +++..+.++.....+++.+++.++.|++.|| +|||+....+...+. ++....
T Consensus 267 ~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r--~~~~~~~~~g~~~~~-~~~~~~----- 338 (485)
T TIGR00711 267 LGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDK--IDPRKLVTIGLILYA-VGFYWR----- 338 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCcHHHHHHHHHHHH-HHHHHH-----
Confidence 111 111112333322 3344456677777889999999999999999 789886655544331 111111
Q ss_pred hhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 012075 328 NQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVD 407 (471)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~ 407 (471)
...... + ..+.......++.|++.+...+.......+.. ++++++++.++++..+.+|.+++..+.
T Consensus 339 -~~~~~~-------~-----~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~g~~ig~~i~ 404 (485)
T TIGR00711 339 -AFTFTP-------D-----TPFLAIALPQFIRGFGMGCFFMPLTTIALSGL-PPHKIARGSSLSNFTRQLGGSIGTALI 404 (485)
T ss_pred -hccCCC-------C-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 000110 1 12222344556677777766655555554545 355679999999999999988887654
No 44
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.82 E-value=2.8e-18 Score=196.46 Aligned_cols=318 Identities=13% Similarity=0.030 Sum_probs=187.1
Q ss_pred hhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhh
Q 012075 60 ANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIM 139 (471)
Q Consensus 60 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i 139 (471)
.+...++..+...++++++|+++||+|||++++++.++..++.+.......+++.+.+++.|++.|++.+...++..+++
T Consensus 49 ~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 128 (1146)
T PRK08633 49 TAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGII 128 (1146)
T ss_pred HHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhh
Confidence 45556666777888999999999999999999998876655443333322346789999999999999999999999999
Q ss_pred ccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccC--CCccccccchh---HHHHHHHHHHHHHHHhccCCCccccC
Q 012075 140 TSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNR--NEAVSVNDGTY---IGFMCFMSAGALLSLVILPPGRVIRD 214 (471)
Q Consensus 140 ~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~i~~~~l~~p~~~~r~ 214 (471)
.|+.|+++|++++|++.....+|.++|+.++..+.... .....+.+..+ +......++++++. +..|+.+..+.
T Consensus 129 ~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 207 (1146)
T PRK08633 129 PELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFA-YRLPKVPAAAP 207 (1146)
T ss_pred HHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHH-hcCcCCCCCCc
Confidence 99999999999999999999999999999874443210 00000111111 11111111222222 22232111111
Q ss_pred CCCccccccCCCHHHHHHHHHH-HhcchhHHHHHHHHHHhH---hHhhhcccccccc--ccccc-hhhhHHHHHHHHHHH
Q 012075 215 DGTHCTNIKYSNVSTEITQVLK-LFSNWKMLLIFPASWASN---FFYSYQFNNVNGL--QFNLR-TRGLNNVFYWGAQML 287 (471)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~~~~~~~---~~~s~~~~~~~~~--~~~~~-~~~l~~~~~~i~~i~ 287 (471)
+..+ ..+.... ++.++.++ .+++|.++.......... ......++.+... +++.. ..++.....+++.++
T Consensus 208 ~~~~--~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~ 284 (1146)
T PRK08633 208 EVFD--KKKYLFP-KLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGI 284 (1146)
T ss_pred cccc--ccccccH-HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHH
Confidence 1000 0011111 12222222 334454443322221111 1111111333222 23333 456677778899999
Q ss_pred HhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHH
Q 012075 288 GSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMF 367 (471)
Q Consensus 288 g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 367 (471)
+.++.+++.|| .++++...++.+++. +..... .+ . .+....+++.+++|++.+..
T Consensus 285 g~~~~g~l~~r--~~~~~~~~~~~~~~~-~~~~~~----~~---------------~---~~~~~~~~~~~~~g~~~~~~ 339 (1146)
T PRK08633 285 GSLLAGRLSGR--HIELGLVPLGALGLA-LSLFLL----PT---------------A---PSLASVLVLFFLFGFSAGLF 339 (1146)
T ss_pred HHHHHHHHhCC--ceEccchhHHHHHHH-HHHHHH----HH---------------h---hhHHHHHHHHHHHHHHHHHh
Confidence 99999999998 677766555543331 111111 00 0 12223455667778877777
Q ss_pred HHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 012075 368 QSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVD 407 (471)
Q Consensus 368 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~ 407 (471)
.+....++.+..+ ++.+++++|+.+++++++..++..+.
T Consensus 340 ~~~~~~~~~~~~p-~~~rg~~~~~~~~~~~lg~~~~~~~~ 378 (1146)
T PRK08633 340 IVPLNALIQFRAP-EKELGKVLAANNFLQNVGMLLFLALT 378 (1146)
T ss_pred hHHHHHHHhhcCC-ccchhhhhHHHHHHHHHHHHHHHHHH
Confidence 7777777777773 33558999999998888876554443
No 45
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.82 E-value=4.4e-18 Score=172.06 Aligned_cols=308 Identities=10% Similarity=0.038 Sum_probs=178.6
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEG 136 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~ 136 (471)
+.......+.....+.+..+++|+++||+|||++++++.+++.+....+.. +.+ .++.|+++|++.+...++..
T Consensus 37 ~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~---~~~---~~~~r~l~G~~~a~~~pa~~ 110 (393)
T PRK11195 37 DWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLF---GIH---PLLAYGLVGIGAAAYSPAKY 110 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHH---HHH---HHHHHHHHHHHHHHHHHHHH
Confidence 334455566666778888999999999999999999999987664333222 223 27899999999999999999
Q ss_pred hhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchh-HHHHHHHHHHHHHHHhccCCCccccCC
Q 012075 137 AIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTY-IGFMCFMSAGALLSLVILPPGRVIRDD 215 (471)
Q Consensus 137 ~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~l~~p~~~~r~~ 215 (471)
+++.|+.|+++|++++|+.+...++|.++||.++..+. . +.+... .+......+.. +..+..|+++.++++
T Consensus 111 a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~-~------~~~~~~~~i~~~~~~~~~-~~~~~l~~~~~~~~~ 182 (393)
T PRK11195 111 GILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALA-D------PHAEAALAVCALIYLLAA-LFNLFIPRLGARRPG 182 (393)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H------HHHHHHHHHHHHHHHHHH-HHHhcCCCCcccccc
Confidence 99999999999999999999999999999999974332 1 112111 11111111121 222333322111110
Q ss_pred CCccccccCCCHHHHHHHHHH-HhcchhHHHHHHH--HHHh-HhHhhhcccccccc--ccccchhhhHHHHHHHHHHHHh
Q 012075 216 GTHCTNIKYSNVSTEITQVLK-LFSNWKMLLIFPA--SWAS-NFFYSYQFNNVNGL--QFNLRTRGLNNVFYWGAQMLGS 289 (471)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~~--~~~~-~~~~s~~~~~~~~~--~~~~~~~~l~~~~~~i~~i~g~ 289 (471)
.+ .+.+...+++++.++ .+++|.+...... .++. .....+.++.+... +.+..+.++.....+++.++++
T Consensus 183 ~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~ 258 (393)
T PRK11195 183 QS----WNPIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGA 258 (393)
T ss_pred cC----CCHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHH
Confidence 00 001111222222222 2344433222111 1111 11111111222221 2344456777788899999999
Q ss_pred hhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHH
Q 012075 290 VGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQS 369 (471)
Q Consensus 290 ~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 369 (471)
+..+++.|| .++|+....+. .+ +..... +.. . +.++......++.|++.+..++
T Consensus 259 ~~~~~l~~~--~~~~~~~~~g~-~~---~~~~~~--~~~----~--------------~~~~~~~~~~~~~G~~~g~~~~ 312 (393)
T PRK11195 259 GAAARLVTL--ETVLRVLPAGI-LM---GLVVLL--MAL----Q--------------HSLLPAYPLLILIGALGGFFVV 312 (393)
T ss_pred HHHHHHhcC--CcccchHHHHH-HH---HHHHHH--HHH----H--------------hHHHHHHHHHHHHHHhhhhhhh
Confidence 999999997 56665444332 11 111111 100 0 1122234455567777777666
Q ss_pred HHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 370 MVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 370 ~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
.....+.+..++...++++.++.+..+.++..++..+..
T Consensus 313 ~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~ 351 (393)
T PRK11195 313 PMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYS 351 (393)
T ss_pred hHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHH
Confidence 666666665432222588999999999888888877654
No 46
>PRK10504 putative transporter; Provisional
Probab=99.81 E-value=1.3e-17 Score=172.64 Aligned_cols=321 Identities=12% Similarity=0.011 Sum_probs=188.5
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++...+...+....+..++.+++|+++||+|||+.++.+.+++.+....+ ..+++.+.++++|++.|++.+...+..
T Consensus 43 s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~g~~~~~~~~~~ 119 (471)
T PRK10504 43 SPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFC---ALSGTLNELLLARVLQGVGGAMMVPVG 119 (471)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH---HHhCCHHHHHHHHHHHHhhhHHHHHHH
Confidence 34444455566667778889999999999999999999887766533322 236789999999999999999999888
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCc--ccc
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGR--VIR 213 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~--~~r 213 (471)
..++.|..|+++|++..+++....++|..+|+.++..+... .+|++.++ +...+..+..++.....|..+ .+|
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~----~gw~~~f~-~~~~~~~l~~~~~~~~~~~~~~~~~r 194 (471)
T PRK10504 120 RLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY----ASWHWIFL-INIPVGIIGAIATLMLMPNYTMQTRR 194 (471)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh----ccHHHHHH-HHHHHHHHHHHHHHHhCCCccccCCC
Confidence 99999999999999999999999999999999987433221 23554333 222233333333333333111 112
Q ss_pred CCCCcc--------------ccccCCCHH--------------------HHH-----HHHHHHhcchhHHHHHHHHHHhH
Q 012075 214 DDGTHC--------------TNIKYSNVS--------------------TEI-----TQVLKLFSNWKMLLIFPASWASN 254 (471)
Q Consensus 214 ~~~~~~--------------~~~~~~~~~--------------------~~~-----~~~~~~~~~~~~ll~~~~~~~~~ 254 (471)
.|.... ...+...+. ++. .-..+.+++|++.......+..+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~ 274 (471)
T PRK10504 195 FDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGR 274 (471)
T ss_pred CChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHHHHHHH
Confidence 221000 000000000 000 00123445565544433323222
Q ss_pred hH---hhhcccccccc--ccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhh
Q 012075 255 FF---YSYQFNNVNGL--QFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQ 329 (471)
Q Consensus 255 ~~---~s~~~~~~~~~--~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~ 329 (471)
.. ..+..+.+..+ +++....++......++.+++.++.+++.|| +|||+....+.....+.. ... ..
T Consensus 275 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r--~g~~~~~~~~~~~~~~~~-~~~----~~- 346 (471)
T PRK10504 275 IGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNR--FGYRRVLVATTLGLALVS-LLF----ML- 346 (471)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCchHHHHHHHHHHHHHH-HHH----Hh-
Confidence 11 11111222222 2333345566677788888888889999999 799987766554332111 111 10
Q ss_pred cccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 012075 330 LNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVD 407 (471)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~ 407 (471)
.+ . . .......+..++.|++.+...+....+..+..+ +++.+.+.++.++.+.+|.+++-.+.
T Consensus 347 --~~--------~--~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~g~~ig~~i~ 409 (471)
T PRK10504 347 --VA--------L--L--GWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLP-DNLASSGNSLLSMIMQLSMSIGVTIA 409 (471)
T ss_pred --cc--------c--c--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-HHhccchHHHHHHHHHHHHHHHHHHH
Confidence 01 0 0 111112334445566666666666666777763 34568899999999888888876654
No 47
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.81 E-value=1.8e-17 Score=166.87 Aligned_cols=300 Identities=14% Similarity=0.095 Sum_probs=174.5
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
.++...+...+....+..+++++.|+++||+|||+.+.++.+.+.+..... ..++|.+.++++|++.|++.+..++.
T Consensus 38 ~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~G~~~~~~~~~ 114 (381)
T PRK03633 38 LPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGL---GLMVGFWSWLAWRFVAGIGCAMIWVV 114 (381)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777888888889999999999999999999999998776533322 33688999999999999999998877
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccC
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRD 214 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~ 214 (471)
....+.+..++++||+.++++....++|..+|+.+...+... ..+...|.. ... ....+..++.+.+++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-----~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~--- 184 (381)
T PRK03633 115 VESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE-----LMSVLPWVT-GLV-LAAILPLLFTRILNQQ--- 184 (381)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----ccchHHHHH-HHH-HHHHHHHHHhcccCCC---
Confidence 666667778899999999999999999999999987333211 111122221 111 1111222222222111
Q ss_pred CCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhH----hHhhhccccccc-cccccchhhhHHHHHHHHHHHHh
Q 012075 215 DGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASN----FFYSYQFNNVNG-LQFNLRTRGLNNVFYWGAQMLGS 289 (471)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~----~~~s~~~~~~~~-~~~~~~~~~l~~~~~~i~~i~g~ 289 (471)
+++ +++++. ++ .+++|+........+..+ ..+++. +.+.. .+.+....+.......++.+++.
T Consensus 185 ~~~----~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l-p~~~~~~g~s~~~~g~~~~~~~~~~~~~~ 252 (381)
T PRK03633 185 AEN----HDSTSI----WP---MLKLRQARLGVNGCIISGIVLGSLYGLM-PLYLNHQGMSDASIGFWMALLVSAGILGQ 252 (381)
T ss_pred CCC----CCCCCH----HH---HHHhcchHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 000 011121 11 233343332221111111 112222 33332 23343345555566778889999
Q ss_pred hhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHH
Q 012075 290 VGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQS 369 (471)
Q Consensus 290 ~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 369 (471)
...|++.|| +|||+....+...+. +..+... . . .. ......++++......+
T Consensus 253 ~~~g~l~dr--~~~~~~l~~~~~~~~-~~~~~~~---------~--------~-----~~---~~~~~~l~g~~~~~~~p 304 (381)
T PRK03633 253 WPIGRLADR--FGRLLVLRVQVFVVI-LGSIAML---------S--------Q-----AA---MAPALFILGAAGFTLYP 304 (381)
T ss_pred hhhHHHHHH--cCcHHHHHHHHHHHH-HHHHHHh---------h--------h-----HH---HHHHHHHHHHHHHhHHH
Confidence 999999999 788876655543331 1111110 0 0 00 11223334555555556
Q ss_pred HHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 370 MVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 370 ~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
.......|..+ +++.+.+.+.++...++|.+++-.+..
T Consensus 305 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~lG~~igp~~~G 342 (381)
T PRK03633 305 VAMAWACEKVE-HHELVAMNQALLLSYTVGSLLGPSFTA 342 (381)
T ss_pred HHHHHHHccCC-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555666653 334355566666656667766665544
No 48
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.80 E-value=1.6e-17 Score=168.35 Aligned_cols=241 Identities=12% Similarity=0.034 Sum_probs=145.7
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhh--hcccchHHHHHHHHHHhhhhhHHH
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYY--NHHKHQAFAIAAGAILGIGAGLLW 132 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~--~~~~~~~~li~~r~l~G~g~g~~~ 132 (471)
.++.+.....++..+.+++..+..|++.||+|+|+.+.++.+...+........ ...++++.+++.|++.|++ +..+
T Consensus 67 ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f 145 (462)
T PRK15034 67 FTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANF 145 (462)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhH
Confidence 445566667777888888998888999999999999999998776543322210 0127899999999999998 6677
Q ss_pred hhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHH-----HhhccCC-C--------ccccccchhHHHHHHHHHH
Q 012075 133 AAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPF-----ILNYNRN-E--------AVSVNDGTYIGFMCFMSAG 198 (471)
Q Consensus 133 ~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~-----~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~ 198 (471)
++....++++.|+++||+++|++...-++|..+++.+.- .+....+ + ...+++. .++...+.++.
T Consensus 146 ~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~-~~~~~~~~iv~ 224 (462)
T PRK15034 146 ASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANA-AWIWVPLLAIA 224 (462)
T ss_pred HHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHH-HHHHHHHHHHH
Confidence 888888999999999999999997666666655544421 1111000 0 0011111 12222223333
Q ss_pred HHHHHhccCCCccccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhH--h-Hhhhccccccccccccchhh
Q 012075 199 ALLSLVILPPGRVIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASN--F-FYSYQFNNVNGLQFNLRTRG 275 (471)
Q Consensus 199 ~i~~~~l~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~--~-~~s~~~~~~~~~~~~~~~~~ 275 (471)
.++..++.++.+. ++.+ +++..+.+++|+.+++..+.+.+. + .+++.++.+....++.....
T Consensus 225 ~i~~~~~~~~~~~-----------~~~~----~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~~~~~l 289 (462)
T PRK15034 225 TIAAWSGMNDIAS-----------SRAS----IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNIL 289 (462)
T ss_pred HHHHHHhCCCccc-----------cccC----HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHH
Confidence 3334444332110 0112 234455678888776665544331 2 12333344433233221111
Q ss_pred hHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhH
Q 012075 276 LNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVV 314 (471)
Q Consensus 276 l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~ 314 (471)
.......+...+..+++|+++|| +|+|+...++.+.+
T Consensus 290 ~~~~l~~l~~~l~rplgG~LADR--iG~~~vl~~~~i~~ 326 (462)
T PRK15034 290 RLAFFGPFIGAIARSVGGAISDK--FGGVRVTLINFIFM 326 (462)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHh--cCchHHHHHHHHHH
Confidence 22333456677888899999999 88998777776555
No 49
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.80 E-value=4.4e-17 Score=164.13 Aligned_cols=232 Identities=11% Similarity=0.047 Sum_probs=151.7
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++...+...+....+..++++++|++.||+|||+++.++.++..+.... ...++|.+.+++.|++.|++.+...+..
T Consensus 36 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l---~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 112 (382)
T PRK10091 36 SIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAM---FTLSSSYLMLAIGRLVSGFPHGAFFGVG 112 (382)
T ss_pred CHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH---HHHhCcHHHHHHHHHHHHhhhHHHHHHH
Confidence 4455567778888888999999999999999999999999887653322 2347899999999999999999988888
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCC
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDD 215 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~ 215 (471)
..++.|+.|+++|++.++++.....+|..+|+.++..+... .+|++. |.+..++..+..+...+..| +..+++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~----~gwr~~-f~~~~~~~~~~~~~~~~~lp-~~~~~~- 185 (382)
T PRK10091 113 AIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQE----FSWRYT-FLLIAVFNIAVLASIYFWVP-DIRDEA- 185 (382)
T ss_pred HHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhh----ccHHHH-HHHHHHHHHHHHHHHHHhCC-CCCccc-
Confidence 88899999999999999999999999999998886433211 235544 33333333332222223333 221111
Q ss_pred CCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHh--Hh--Hhhhccccccc--cccccchhhhHHHHHHHHHHHHh
Q 012075 216 GTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWAS--NF--FYSYQFNNVNG--LQFNLRTRGLNNVFYWGAQMLGS 289 (471)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~--~~--~~s~~~~~~~~--~~~~~~~~~l~~~~~~i~~i~g~ 289 (471)
+.+.++ .++.+++++.+......... +. ..++. +.+.. .+++..+.++.....+++.+++.
T Consensus 186 --------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~ 252 (382)
T PRK10091 186 --------KGGLRE----QFHFLRSPAPWLIFAATMFGNAGVFAWFSYI-KPYMMFISGFSETSMTFIMMLVGLGMVLGN 252 (382)
T ss_pred --------ccCHHH----HHHHhcChHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCHHHHHHHHHHHHHHHHHHh
Confidence 111111 23345555544433222221 11 11222 22222 23444456677777889999999
Q ss_pred hhhhhhcccCCCCccceeeehhh
Q 012075 290 VGIGYIFDFSFPTRRKRGFVGIV 312 (471)
Q Consensus 290 ~~~g~l~D~~~~gRr~~~~~g~~ 312 (471)
++.+++.|| +|||+....+..
T Consensus 253 ~~~g~l~~r--~~~~~~~~~~~~ 273 (382)
T PRK10091 253 LLSGRLSGR--YSPLRIAAVTDF 273 (382)
T ss_pred HHHheeccc--cCchhHHHHHHH
Confidence 999999999 788876655443
No 50
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.80 E-value=1.1e-17 Score=171.67 Aligned_cols=245 Identities=14% Similarity=0.069 Sum_probs=143.8
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhh-cccchHHHHHHHHHHhhhhhHHHh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYN-HHKHQAFAIAAGAILGIGAGLLWA 133 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~-~~~~~~~li~~r~l~G~g~g~~~~ 133 (471)
.++...+...+....+..+++++.|+++||+|||+.+.++.+++.+......... ..++.+.+++.|++.|++.+..++
T Consensus 58 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~ 137 (438)
T TIGR00712 58 FSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWP 137 (438)
T ss_pred CCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchH
Confidence 3455556667777888889999999999999999999998877665332221110 124567888999999999999888
Q ss_pred hhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCcc--
Q 012075 134 AEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRV-- 211 (471)
Q Consensus 134 ~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~-- 211 (471)
....++.|+.|+++||+++++++...++|..+++.+....... ..+|++. +++..++.++..+...++.|+++.
T Consensus 138 ~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~---~~~w~~~-f~~~~~~~~i~~~~~~~~~~~~~~~~ 213 (438)
T TIGR00712 138 PCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW---FNDWHAA-LYFPAICAIIVALFAFAMMRDTPQSC 213 (438)
T ss_pred HHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH---hhhhHHH-HHHHHHHHHHHHHHHHHhccCCHHhc
Confidence 8888899999999999999999999999998887664222211 1235443 333333333333333333332111
Q ss_pred c-cCCC---Ccc--ccccCCCHHHHHHHHH--HHhcchhHHHHHHHHHHhHh-Hh--hhccccccc--cccccchhhhHH
Q 012075 212 I-RDDG---THC--TNIKYSNVSTEITQVL--KLFSNWKMLLIFPASWASNF-FY--SYQFNNVNG--LQFNLRTRGLNN 278 (471)
Q Consensus 212 ~-r~~~---~~~--~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~~~~~~~~-~~--s~~~~~~~~--~~~~~~~~~l~~ 278 (471)
+ ++++ ++. ...++++.+.+.++.+ +.+++|+++........... .+ ....+.+.. .+++....++..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~ 293 (438)
T TIGR00712 214 GLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAY 293 (438)
T ss_pred CCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHH
Confidence 0 0000 000 0000000000112211 23456655544333222211 11 111234433 234444556767
Q ss_pred HHHHHHHHHHhhhhhhhcccCCCCccc
Q 012075 279 VFYWGAQMLGSVGIGYIFDFSFPTRRK 305 (471)
Q Consensus 279 ~~~~i~~i~g~~~~g~l~D~~~~gRr~ 305 (471)
...+++.+++.++.|++.|| ++|++
T Consensus 294 ~~~~~~~~ig~~~~g~l~dr--~~~~~ 318 (438)
T TIGR00712 294 FLYEYAGIPGTLLCGWMSDK--VFKGN 318 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHH--hccCc
Confidence 77888999999999999999 54443
No 51
>PRK11043 putative transporter; Provisional
Probab=99.80 E-value=9.4e-17 Score=162.74 Aligned_cols=308 Identities=13% Similarity=0.070 Sum_probs=180.7
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
.++...+...+....+..++++++|+++||+|||+.+.++.+...+..... ..+++.+.+++.|++.|++.+...+.
T Consensus 38 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~G~~~~~~~~~ 114 (401)
T PRK11043 38 TSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGM---LWVESAAQLLVLRFVQAVGVCSAAVI 114 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHH---HHhcCHHHHHHHHHHHHhhhHHHHHH
Confidence 345566677778888888999999999999999999999987765532222 23578999999999999999888777
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccC
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRD 214 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~ 214 (471)
...++.|..++++|++..+..+....+|..+||.++..+... .+|++. +....++..+..+..++++| ++.+++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~----~g~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~ 188 (401)
T PRK11043 115 WQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH----FGWQAI-FATLFAITLLLILPTLRLKP-SKKARK 188 (401)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CChHHH-HHHHHHHHHHHHHHHHHcCC-CCCccc
Confidence 778889999999999999999888889999999887433211 234433 33333333333333333332 211110
Q ss_pred CCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHH-hHhHhh--hccccccc-cccccchhhhHHHHHHHHHHHHhh
Q 012075 215 DGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWA-SNFFYS--YQFNNVNG-LQFNLRTRGLNNVFYWGAQMLGSV 290 (471)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~~~s--~~~~~~~~-~~~~~~~~~l~~~~~~i~~i~g~~ 290 (471)
+++.+ ++..+.+++|+.+........ ...++. ...+.+.. .+++....++......++.++|.+
T Consensus 189 ---------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~ 256 (401)
T PRK11043 189 ---------QSQDA---LTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGY 256 (401)
T ss_pred ---------cchHH---HHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 00111 122334455554322221111 111111 11122222 234444456666677888889999
Q ss_pred hhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHH
Q 012075 291 GIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSM 370 (471)
Q Consensus 291 ~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 370 (471)
..+++.|| ++||+....+...........+. .. . .. . +......+...+.++..+...+.
T Consensus 257 ~~~~l~~r--~~~~~~~~~~~~~~~~~~~~~~~--~~-~--~~-----------~--~~~~~~~~~~~~~~~~~~~~~~~ 316 (401)
T PRK11043 257 GCRAALQK--WGGEQLLPWLLVLFAVSVIAIWL--AS-L--LS-----------H--PSLVPLLIPFCVMAAANGAIYPI 316 (401)
T ss_pred HHHHHHHH--cCHHHHHHHHHHHHHHHHHHHHH--HH-H--hc-----------c--CcHHHHHHHHHHHHHHHHHHHHH
Confidence 88999998 77877554443333222111111 10 0 00 0 12222333445566666666665
Q ss_pred HHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhh
Q 012075 371 VYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQ 405 (471)
Q Consensus 371 ~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~ 405 (471)
......+..+ ++++++.++++.++..+...+-.
T Consensus 317 ~~~~~~~~~~--~~~g~~~g~~~~~~~~~~~~~~~ 349 (401)
T PRK11043 317 VVAQALRPFP--QATGKAAALQNTLQLGLCFLASL 349 (401)
T ss_pred HHHHHhhhCc--ccChHHHHHHHHHHHHHHHHHHH
Confidence 5545445453 34589999999887555444444
No 52
>PRK15075 citrate-proton symporter; Provisional
Probab=99.79 E-value=6.4e-17 Score=165.82 Aligned_cols=288 Identities=13% Similarity=0.069 Sum_probs=159.0
Q ss_pred HHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchH--------HHHHHHHHHhhhhhHHHhhhhhhhcc
Q 012075 70 TFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQA--------FAIAAGAILGIGAGLLWAAEGAIMTS 141 (471)
Q Consensus 70 ~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~--------~li~~r~l~G~g~g~~~~~~~~~i~~ 141 (471)
...+++++.|+++||+|||+.++.+.+.+.+..... ..+++.+ .++++|+++|++.+..++....+++|
T Consensus 68 ~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e 144 (434)
T PRK15075 68 MRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLI---AFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAE 144 (434)
T ss_pred HhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHH---HhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHh
Confidence 335788999999999999999999999877644333 3356665 46899999999999998888899999
Q ss_pred CCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccC----CCccccccchhHHHHHHHHHHHHHHHhcc--CCCccccCC
Q 012075 142 YPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNR----NEAVSVNDGTYIGFMCFMSAGALLSLVIL--PPGRVIRDD 215 (471)
Q Consensus 142 ~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~l~--~p~~~~r~~ 215 (471)
+.|+++||+.++++....++|..+|+.++..+.... .+..+|++..+. .++. .+..++.+ +|+..+..+
T Consensus 145 ~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~--~~~~---~~~~~~~~~~~~e~~~~~~ 219 (434)
T PRK15075 145 IATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLI--GCLI---VPFIFLIRRSLEETEEFLA 219 (434)
T ss_pred hCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHH--HHHH---HHHHHHHHHhcCCCHHHHH
Confidence 999999999999999888888888777764332100 001234433221 1111 11112221 222110000
Q ss_pred CCccccccCCCHHHHHHHHHHHhcchhHHHHH-HHHHHhHh---Hhhhccccccc--cccccchhhhHHHHHHHHHHHHh
Q 012075 216 GTHCTNIKYSNVSTEITQVLKLFSNWKMLLIF-PASWASNF---FYSYQFNNVNG--LQFNLRTRGLNNVFYWGAQMLGS 289 (471)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-~~~~~~~~---~~s~~~~~~~~--~~~~~~~~~l~~~~~~i~~i~g~ 289 (471)
+ +++++.++.+++. .++++.+... ...+.... ......+.+.. .+++..+.++.....+++.+++.
T Consensus 220 ~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 291 (434)
T PRK15075 220 R-----KHRPSMREIFRSL---AANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWL 291 (434)
T ss_pred h-----hhccccccHHHHH---HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 0111111112221 2233332221 11111111 11111244432 23444455666777888999999
Q ss_pred hhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHH
Q 012075 290 VGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQS 369 (471)
Q Consensus 290 ~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 369 (471)
++.|++.|| +|||+....+........... +... . + + +.........++.+++.+...+
T Consensus 292 ~~~g~l~Dr--~g~r~~~~~~~~~~~~~~~~~----~~~~---~--------~--~--~~~~~~~~~~~~~~~~~g~~~~ 350 (434)
T PRK15075 292 PIGGALSDR--IGRRPVLIAFTVLAILTAYPA----LSWL---V--------A--A--PSFARMLAVELWLSFLYGSYNG 350 (434)
T ss_pred HHHHHHHHH--hcchHHHHHHHHHHHHHHHHH----HHHH---H--------c--C--CchHHHHHHHHHHHHHHHHHHh
Confidence 999999999 789886654432221111100 0000 0 0 0 1111122223334455556666
Q ss_pred HHHHHHHHhcCCchhhhHHHHHHHHH
Q 012075 370 MVYWVIGALADDSETLSRYSGFYKGV 395 (471)
Q Consensus 370 ~~~~~i~~~~~~~~~~~~~~~~~~~~ 395 (471)
..+.++.|.+++. .++++.++.+++
T Consensus 351 ~~~~~~~e~~p~~-~rg~~~g~~~~~ 375 (434)
T PRK15075 351 AMVVALTEVMPAE-VRTAGFSLAYSL 375 (434)
T ss_pred hHHHHHHHHCCCC-ccchheeHHHHH
Confidence 5666788888433 447777775543
No 53
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.79 E-value=9.2e-18 Score=167.68 Aligned_cols=322 Identities=16% Similarity=0.084 Sum_probs=182.4
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++...+...+....+..+++++.|+++||+|||+.++++.++..+..... ..+++.+.+++.|++.|++.+...+..
T Consensus 28 s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~ 104 (379)
T TIGR00881 28 SKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFF---GFSTSLWVMAALWALNGIFQGMGWPPC 104 (379)
T ss_pred CHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHH---HHhhhHHHHHHHHHHHHhhccccCCch
Confidence 34455666777778888899999999999999999999998776533332 235789999999999999999999999
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhh-HHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCcccc-
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGG-LIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIR- 213 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r- 213 (471)
..++.|+.|+++|++.+++......+|..+|+ ++...+... .+|++. ++...++..+..++..++.|+++.++
T Consensus 105 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (379)
T TIGR00881 105 GRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL----YSWHWV-FIVPGIIAIIVSLICFLLLRDSPQSCG 179 (379)
T ss_pred HHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc----CCchhH-HHHHHHHHHHHHHHHheeeCCCccccc
Confidence 99999999999999999999999999999999 455333321 234443 33333333333333333333221110
Q ss_pred --C-CCCccc-----cccCCCHHHHHHH-HHHHhcchhHHHHHHHHHHhHh---Hhhhccccccc--cccccchhhhHHH
Q 012075 214 --D-DGTHCT-----NIKYSNVSTEITQ-VLKLFSNWKMLLIFPASWASNF---FYSYQFNNVNG--LQFNLRTRGLNNV 279 (471)
Q Consensus 214 --~-~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~ll~~~~~~~~~~---~~s~~~~~~~~--~~~~~~~~~l~~~ 279 (471)
+ ++.+.+ .+++++.++..+. ..+.+++|.++.+....+.... ......+.+.. .+++..+.++...
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 259 (379)
T TIGR00881 180 LPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFT 259 (379)
T ss_pred cCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 0 000000 0000000011111 1223455555443332222111 11111133322 2334445566677
Q ss_pred HHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHH
Q 012075 280 FYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFC 359 (471)
Q Consensus 280 ~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (471)
..+++.+++.++.+++.||. .+|+............ ..... .. . .. . . .+.....++.+.
T Consensus 260 ~~~~~~~~~~~~~g~l~~r~--~~~~~~~~~~~~~~~~-~~~~~-~~--~--~~--------~--~--~~~~~~~~~~~~ 319 (379)
T TIGR00881 260 LYELGGLVGTLLAGWLSDKL--FNGRRGPLAVFFMALI-IVSLL-VY--W--LN--------P--A--ANPLMDLICLFA 319 (379)
T ss_pred HHHHHcchhHHHHHHHHHHH--cCCcchHHHHHHHHHH-HHHHH-HH--h--cC--------c--c--hhHHHHHHHHHH
Confidence 78899999999999999983 2222222222111111 11100 00 0 00 0 0 111122334444
Q ss_pred HHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhh
Q 012075 360 YGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQV 406 (471)
Q Consensus 360 ~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~ 406 (471)
.|+......+..+.+..|..+ +++++++.|+++...+++..++-.+
T Consensus 320 ~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~~~~ 365 (379)
T TIGR00881 320 LGFLVYGPQMLIGVIASELAP-KKAAGTAAGFVGFFAYLGGILAGLP 365 (379)
T ss_pred HHHHHhhhhHHHHHHHHHhcC-cchhHHHHHHHHHhhhhhhhhhhhh
Confidence 555544444555566788774 3456889998888887777665544
No 54
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.79 E-value=5.5e-17 Score=164.52 Aligned_cols=303 Identities=13% Similarity=0.068 Sum_probs=177.3
Q ss_pred hHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhc
Q 012075 61 NNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMT 140 (471)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~ 140 (471)
+...+..+....+++++.|+++||+|||+.++++.+...+..... ...++.+.+++.|++.|++.+. .+....++.
T Consensus 57 g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~ 132 (408)
T PRK09874 57 GLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLM---GLAQNIWQFLILRALLGLLGGF-VPNANALIA 132 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHH---HHHhhHHHHHHHHHHHHHhhhh-HHhHHHHHH
Confidence 445566677778889999999999999999999887766533222 2357889999999999998765 455566778
Q ss_pred cCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCCCCccc
Q 012075 141 SYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDDGTHCT 220 (471)
Q Consensus 141 ~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~~~~~~ 220 (471)
|..|+++||++++++.....+|..+|+.+...+... .+|++. +++..++..+..+...++.|++.. ++ ++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~--- 202 (408)
T PRK09874 133 TQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADS----YGLRPV-FFITASVLFLCFLVTLFCIRENFQ-PV-SK--- 202 (408)
T ss_pred HhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH----hCHHHH-HHHHHHHHHHHHHHHHHHhccCcc-cc-cc---
Confidence 888999999999999999999999999887433211 134333 333333333333333333332211 10 00
Q ss_pred cccCCCHHHHHHHHHHHhcchhHHHHH-HHHHHhHhHhhh---cccccccc-ccccch----hhhHHHHHHHHHHHHhhh
Q 012075 221 NIKYSNVSTEITQVLKLFSNWKMLLIF-PASWASNFFYSY---QFNNVNGL-QFNLRT----RGLNNVFYWGAQMLGSVG 291 (471)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~ll~~-~~~~~~~~~~s~---~~~~~~~~-~~~~~~----~~l~~~~~~i~~i~g~~~ 291 (471)
++ +.+.++.++.+++|+.+... ...+......+. .++.+... ..+... .+......+++.+++.+.
T Consensus 203 ---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~ 277 (408)
T PRK09874 203 ---KE--MLHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPR 277 (408)
T ss_pred ---hh--hhHHHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 11123344555666543321 111111111110 11112111 111111 223334567788888888
Q ss_pred hhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHHH
Q 012075 292 IGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSMV 371 (471)
Q Consensus 292 ~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 371 (471)
.|++.|| +|||+....+..... +.... .. . . .......+..++.|++.+...+..
T Consensus 278 ~g~l~dr--~g~~~~~~~~~~~~~-~~~~~----~~-~---~--------------~~~~~~~~~~~~~g~~~~~~~~~~ 332 (408)
T PRK09874 278 LGKLGDR--IGPEKILITALIFSV-LLLIP----MS-F---V--------------QTPLQLGILRFLLGAADGALLPAV 332 (408)
T ss_pred HHHHHhc--cccchhHHHHHHHHH-HHHHH----HH-H---h--------------ccHHHHHHHHHHHHhhhHhhHHHH
Confidence 9999999 788887665543321 11111 00 0 0 111223455566788887777766
Q ss_pred HHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 372 YWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 372 ~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
...+.+.. +++++++.+++++..+.+|.+++..+..
T Consensus 333 ~~~~~~~~-~~~~~g~~~~~~~~~~~~g~~~gp~~~G 368 (408)
T PRK09874 333 QTLLVYNS-SNQIAGRIFSYNQSFRDIGNVTGPLMGA 368 (408)
T ss_pred HHHHHHhC-CcccceeeehHHHHHHHHHHHhhHHHHH
Confidence 66665555 3345588889888888888888776654
No 55
>PRK10133 L-fucose transporter; Provisional
Probab=99.79 E-value=7.8e-17 Score=165.11 Aligned_cols=298 Identities=13% Similarity=0.050 Sum_probs=177.1
Q ss_pred cCCCCCCChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhh
Q 012075 49 MGGGGQVDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGA 128 (471)
Q Consensus 49 l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~ 128 (471)
++.+...++...+...+..+.+..+++++.|++.||+|||+++.++.+++.+....+.....+++++.++++|++.|+|.
T Consensus 52 i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~ 131 (438)
T PRK10133 52 FQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGL 131 (438)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 33333345566677777888889999999999999999999999999988774433321234688999999999999999
Q ss_pred hHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhh-ccCC-------------Cccccccc-------h
Q 012075 129 GLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILN-YNRN-------------EAVSVNDG-------T 187 (471)
Q Consensus 129 g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~-~~~~-------------~~~~~~~~-------~ 187 (471)
|...++...++.|+.++++|++.+++++..+.+|..+|+.++..+. ...+ +...|++. .
T Consensus 132 g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~ 211 (438)
T PRK10133 132 GCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTP 211 (438)
T ss_pred HHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHH
Confidence 9999999999999877777777899999999999999998864322 1100 00012211 1
Q ss_pred hHHHHHHHHHHHHHHHhccCCCccccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHH-HHHhHh---Hhhhcccc
Q 012075 188 YIGFMCFMSAGALLSLVILPPGRVIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPA-SWASNF---FYSYQFNN 263 (471)
Q Consensus 188 ~~~~~~~~~~~~i~~~~l~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~-~~~~~~---~~s~~~~~ 263 (471)
|+....+..+..++..+.+.|+... ++.+ . +++.+..++.+ +.+++|++...... +++... .+++. +.
T Consensus 212 f~~~~~v~~~~~~~~~~~~~p~~~~--~~~~-~-~~~~~~~~~~~---~ll~~~~~~~~~l~~~~~~~~~~~~~~~~-~~ 283 (438)
T PRK10133 212 YMIIVAIVLLVALLIMLTKFPALQS--DNHS-D-AKQGSFSASLS---RLARIRHWRWAVLAQFCYVGAQTACWSYL-IR 283 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCc--cccc-c-ccccchhhhHH---HHHhCchHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 1111111111111222222232111 1000 0 01111222222 33455654332221 122111 12222 33
Q ss_pred cc-c--cccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCc
Q 012075 264 VN-G--LQFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAK 340 (471)
Q Consensus 264 ~~-~--~~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (471)
+. . .+++....++....+.++.++|+.+.+++.|| +|||+....+..+. ...+.. .. . .
T Consensus 284 ~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r--~g~~~~l~~~~~~~-~~~~~~----~~-~---~------- 345 (438)
T PRK10133 284 YAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISR--FAPHKVLAAYALIA-MALCLI----SA-F---A------- 345 (438)
T ss_pred HHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHH-HHHHHH----HH-H---c-------
Confidence 32 2 23444456777788899999999999999999 78888765553322 111111 11 0 0
Q ss_pred cCCCCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcC
Q 012075 341 LDFKNSGSDFAGPFVLYFCYGLLDAMFQSMVYWVIGALAD 380 (471)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 380 (471)
++. .....+.++|++.+...|..+....+.++
T Consensus 346 -------~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~ 377 (438)
T PRK10133 346 -------GGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLG 377 (438)
T ss_pred -------CCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 111 12345667899999999988888877773
No 56
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.79 E-value=1.8e-16 Score=160.24 Aligned_cols=237 Identities=15% Similarity=0.114 Sum_probs=149.0
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++...+...+....+..+++++.|+++||+|||+.++++.+.+.+..... ..+++.+.++++|++.|++.+..++..
T Consensus 36 s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~---~~~~~~~~~~~~~~l~g~~~~~~~~~~ 112 (392)
T PRK10473 36 SEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLC---SLAETSSLFLAGRFLQGIGAGCCYVVA 112 (392)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHH---HHhCcHHHHHHHHHHHHhhhhHHHHHH
Confidence 34444556666677778889999999999999999999988776533322 235788899999999999999988888
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCC
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDD 215 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~ 215 (471)
..++.|..|+++|++..++.+....+|..+||.++..+... .+|++. +++..++..+..++.++..|+++.++++
T Consensus 113 ~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~----~g~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 187 (392)
T PRK10473 113 FAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK----FPWQSL-FYTMAAMGILVLLLSLFILKETRPARAP 187 (392)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----cChHHH-HHHHHHHHHHHHHHHHHHcCCCCCcccC
Confidence 99999999999999999999999999999999887443211 234332 3333333333333333333332211110
Q ss_pred CCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHh---HhHhhhccccccc--cccccchhhhHHHHHHHHHHHHhh
Q 012075 216 GTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWAS---NFFYSYQFNNVNG--LQFNLRTRGLNNVFYWGAQMLGSV 290 (471)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~---~~~~s~~~~~~~~--~~~~~~~~~l~~~~~~i~~i~g~~ 290 (471)
++++.. ++..+.+++|+.+......... ...+....+.+.. .+++....+......+++.+++.+
T Consensus 188 -------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~ 257 (392)
T PRK10473 188 -------AASSKP---RENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSF 257 (392)
T ss_pred -------CccchH---HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 011111 2222344555543322221111 1111111122221 233434456666778889999999
Q ss_pred hhhhhcccCCCCccceeeehhh
Q 012075 291 GIGYIFDFSFPTRRKRGFVGIV 312 (471)
Q Consensus 291 ~~g~l~D~~~~gRr~~~~~g~~ 312 (471)
+.+++.|| +|||+....+..
T Consensus 258 ~~~~l~~r--~g~~~~~~~~~~ 277 (392)
T PRK10473 258 STPFALGI--FKPRTLMLTSQV 277 (392)
T ss_pred HHHHHHHh--cCHHHHHHHHHH
Confidence 99999998 789887655543
No 57
>PRK03699 putative transporter; Provisional
Probab=99.78 E-value=1.5e-16 Score=160.95 Aligned_cols=306 Identities=14% Similarity=0.097 Sum_probs=177.1
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
.++...+...+..+.+..++++++|++.||+|||+.++++.+...+..... ..+++.+.+++.|++.|++.+...+.
T Consensus 39 ~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~---~~~~~~~~~~~~~~l~G~~~g~~~~~ 115 (394)
T PRK03699 39 LPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGL---MFSHSLALFSIAMFVLGVVSGITMSI 115 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH---HHcchHHHHHHHHHHHHHhhHhhccc
Confidence 344555566677778888999999999999999999999988766533322 33678899999999999999988888
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccC
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRD 214 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~ 214 (471)
...++.|..|+++||+.++.......+|..++|.+...+... ..+|++... ...++.++..++.++.++|+..+++
T Consensus 116 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~~gw~~~f~-~~~~~~~~~~~~~~~~~~p~~~~~~ 191 (394)
T PRK03699 116 GTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLAR---SIEWYWVYA-CIGLVYVAIFILTLFSEFPALGKHA 191 (394)
T ss_pred hhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccHHHHHH-HHHHHHHHHHHHHHhcCCccccccC
Confidence 888899999999999999998888888888888775333221 123544332 2222222222222332223311111
Q ss_pred CCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHh---Hhhhcccccccc--ccccchhhhHHHHHHHHHHHHh
Q 012075 215 DGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNF---FYSYQFNNVNGL--QFNLRTRGLNNVFYWGAQMLGS 289 (471)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~---~~s~~~~~~~~~--~~~~~~~~l~~~~~~i~~i~g~ 289 (471)
++ ++++. .+ ...+|++++.....+.... ......+.+... +++..+.+.....+.++.+++.
T Consensus 192 ~~-----~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~ 258 (394)
T PRK03699 192 PK-----ADKPV----AK----EKWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGM 258 (394)
T ss_pred cc-----ccCcc----cc----ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHH
Confidence 00 00000 01 1123444333222221111 111112444422 3344455666667788899999
Q ss_pred hhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHH
Q 012075 290 VGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQS 369 (471)
Q Consensus 290 ~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 369 (471)
++.+++.|| ++||+......... .+. ... .. .. + + . ....+..+.+|+..+...+
T Consensus 259 ~~~g~l~dr--~~~~~~l~~~~~~~-~~~--~~~--~~----~~--------~--~--~--~~~~~~~~~~G~~~~~~~~ 313 (394)
T PRK03699 259 WIFSFIVRF--FDLQRILTVLAGLA-LVL--MYL--FV----NT--------D--D--P--SHLLYAILGLGFFSSAIYT 313 (394)
T ss_pred HHHHHHHHH--hchhhHHHHHHHHH-HHH--HHH--HH----Hc--------C--C--c--hHHHHHHHHHHHHHHHHHH
Confidence 999999999 78887554433222 111 111 10 01 0 1 1 1123344556776666666
Q ss_pred HHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 012075 370 MVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVD 407 (471)
Q Consensus 370 ~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~ 407 (471)
.......+..++.+ ++..+.......+|..++..+.
T Consensus 314 ~~~~~~~~~~~~~~--~~~~g~~~~~~~~g~~i~p~~~ 349 (394)
T PRK03699 314 TIITLGSQQTKVAS--PKLVNFILTCGTIGTMLTFVVT 349 (394)
T ss_pred HHHHHHHHHccCCC--HHHHHHHHHhhhHHHHHHHHHH
Confidence 65556666553322 4556666666666766665543
No 58
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.78 E-value=1.1e-16 Score=160.12 Aligned_cols=306 Identities=15% Similarity=0.076 Sum_probs=168.2
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++...+...+..+.++.++++..|+++||+|||+.++.+.+.... +.......+|.+.++++|++.|+|.+.. ...
T Consensus 24 s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~R~l~G~g~~~~-~~~ 99 (368)
T TIGR00903 24 SKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAA---AAGRLLDPFNYEWLLACQLLAALGQPFL-LNA 99 (368)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHH---HHHHHHHhccHHHHHHHHHHHHhHhHHH-HHH
Confidence 455556667778888999999999999999999987655544432 2211122368999999999999999964 445
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCC
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDD 215 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~ 215 (471)
...++|+.|+++|++++++.+....+|..+++.++..+... .+||+. +....++..+..++..+..|+++..+++
T Consensus 100 ~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~----~gWr~~-f~~~~~l~~~~~~~~~~~lp~~p~~~~~ 174 (368)
T TIGR00903 100 FAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTA----GGLQLL-IIPIAAVAAAGIILVLAALPALPFQAAE 174 (368)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----cchHHH-HHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 55568999999999999999999999999999887544321 245543 3333333333333333334432211110
Q ss_pred CCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHh-Hhh--hccccccc-cccccchhhhHHHHHHHHHHHHhhh
Q 012075 216 GTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNF-FYS--YQFNNVNG-LQFNLRTRGLNNVFYWGAQMLGSVG 291 (471)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~-~~s--~~~~~~~~-~~~~~~~~~l~~~~~~i~~i~g~~~ 291 (471)
. . +..+..++..+.+++|+++.+....+.... .++ ...++++. .+++.. .+.......+. +.+.
T Consensus 175 ~-------~-~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~---g~~g 242 (368)
T TIGR00903 175 G-------F-GFKDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILA---GLIG 242 (368)
T ss_pred C-------c-chHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHH---HHHH
Confidence 0 0 001112233345667777665544433221 111 11244443 233322 23332233333 3333
Q ss_pred hhhhcccC-CCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHH
Q 012075 292 IGYIFDFS-FPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSM 370 (471)
Q Consensus 292 ~g~l~D~~-~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 370 (471)
.+++.||. +.+||+......... ...... ... +. + + . .. ...+..+.+++.....+.
T Consensus 243 ~~~~~d~~~r~~~r~~~~~~~~~~--~a~~~~--~~~----~~--------~--~--~-~~-~~~~~~l~~~~~~~~~~~ 300 (368)
T TIGR00903 243 VAVIPDRVARAGLRSIYIRAAALL--IAAFFL--ALA----FE--------L--N--R-LA-LFAFIGIAGLLMLPAYAI 300 (368)
T ss_pred HHHhhHHhhhhhhHHHHHHHHHHH--HHHHHH--HHH----Hc--------c--c--c-HH-HHHHHHHHHHhhhhhHHH
Confidence 46778872 123333221111111 111110 010 00 0 1 1 11 222333344544445555
Q ss_pred HHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhh
Q 012075 371 VYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQ 405 (471)
Q Consensus 371 ~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~ 405 (471)
.+.+..|.++ ++.++++.|+.++...++...+-.
T Consensus 301 ~~~~~~~~~p-~~~rgt~~G~~~~~g~~~~~~~~~ 334 (368)
T TIGR00903 301 IMDWIGKFCD-KELHGKAAGAIGFTSRAISVALAL 334 (368)
T ss_pred HHHHHHHhcc-hhhcCcccchhhHHHHHHHHHHHH
Confidence 7778899983 335589999999988887755544
No 59
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.78 E-value=2e-16 Score=164.48 Aligned_cols=223 Identities=13% Similarity=0.100 Sum_probs=130.3
Q ss_pred hhhchhhhhhhcc-----chhHH-HHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCC
Q 012075 73 IFGILGGGIYNIL-----GPQVT-LISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPN 146 (471)
Q Consensus 73 i~~~~~g~l~d~~-----Grk~~-l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~ 146 (471)
+++++++|++||+ |||+. ++++.+...+...........++.+.+.+.|++.|++.+...+...++..|+.|++
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~ 139 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE 139 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 5789999999999 99986 44555544432222212111356788999999999999998888999999999999
Q ss_pred chhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCCCCccccccCCC
Q 012075 147 RKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDDGTHCTNIKYSN 226 (471)
Q Consensus 147 ~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~~~~~~~~~~~~ 226 (471)
+||+..++......+|.++|+.+...+..+ ..+|+.. |++..++..+..+..++.++|+. ++++++ ..+++
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~~---~~GWr~~-f~i~a~l~ll~~l~~~~~~e~~~--~~~~~~---~~~~~ 210 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALWLADR---YLGWQGM-YWLMAALLIPCIIATLLAPEPTD--TIPVPK---TLEQA 210 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCHHHH-HHHHHHHHHHHHHHHHhcCCCcc--cccccc---chhhh
Confidence 999999999999999999998876443321 1234443 33333333333333333332221 111000 00111
Q ss_pred HHHHHHHHHHHhcchhHHHHHHHHH-Hh-H--hHhhhccccccc--cccccchhhhHHH-HHHHHHHHHhhhhhhhcccC
Q 012075 227 VSTEITQVLKLFSNWKMLLIFPASW-AS-N--FFYSYQFNNVNG--LQFNLRTRGLNNV-FYWGAQMLGSVGIGYIFDFS 299 (471)
Q Consensus 227 ~~~~~~~~~~~~~~~~~ll~~~~~~-~~-~--~~~s~~~~~~~~--~~~~~~~~~l~~~-~~~i~~i~g~~~~g~l~D~~ 299 (471)
..+++++ .+++++.+......+ +. . ..++.. +++.. .+++..+.++... ...++.++|.++.|++.||
T Consensus 211 ~~~~l~~---~~~~~~~~~~ll~~~l~~~~~~~~~~~~-~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr- 285 (491)
T PRK11010 211 VVAPLRD---FFGRNNAWLILLLIVLYKLGDAFAMSLT-TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQR- 285 (491)
T ss_pred HHHHHHH---HHcCcCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 1222333 334444332222111 11 1 111111 23321 2445445555543 3457889999999999999
Q ss_pred CCCccceeeeh
Q 012075 300 FPTRRKRGFVG 310 (471)
Q Consensus 300 ~~gRr~~~~~g 310 (471)
+|||+...++
T Consensus 286 -~g~~~~l~i~ 295 (491)
T PRK11010 286 -LSLFRALMIF 295 (491)
T ss_pred -HhHHHHHHHH
Confidence 7887755443
No 60
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.77 E-value=2.3e-17 Score=168.65 Aligned_cols=236 Identities=14% Similarity=0.121 Sum_probs=164.9
Q ss_pred hhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhh
Q 012075 58 TAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGA 137 (471)
Q Consensus 58 ~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~ 137 (471)
+.-+...++.|.+++++.+.++.+.||+.-.+.+....+++.++..... . .+|.+.+++.|++.|+..|..|++...
T Consensus 81 ~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~--~-~~s~~~~ialr~llGl~es~~wP~~~~ 157 (495)
T KOG2533|consen 81 NQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTA--A-VHSFPGLIALRFLLGLFESGGWPGVVA 157 (495)
T ss_pred hhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHH--H-HhhhHHHHHHHHHHHHHhcccchHHHH
Confidence 3446678889999999999999999999988888888877766442211 1 589999999999999999999999999
Q ss_pred hhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCC--ccccccchhHHHHHHHHHHHHHHHhccC--CCc--c
Q 012075 138 IMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNE--AVSVNDGTYIGFMCFMSAGALLSLVILP--PGR--V 211 (471)
Q Consensus 138 ~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~l~~--p~~--~ 211 (471)
+++.+..+++||+-+|++++..++|+++|+++++++....+. ..+|+|. |++-.++.....++.+++.| |++ .
T Consensus 158 ~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~-FiI~G~i~~~~gi~~f~~lp~~P~~~~f 236 (495)
T KOG2533|consen 158 ILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWL-FIIEGVITLVLGIVVFFFLPDNPSKAWF 236 (495)
T ss_pred HHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceee-hhHHHHHHHHHHheEEEEecCChhhccc
Confidence 999999999999999999999999999999999885432211 2345554 44444455544444555555 442 1
Q ss_pred ccCCCC-----cccc----ccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHhH---hhhcccccccc--ccccchhhhH
Q 012075 212 IRDDGT-----HCTN----IKYSNVSTEITQVLKLFSNWKMLLIFPASWASNFF---YSYQFNNVNGL--QFNLRTRGLN 277 (471)
Q Consensus 212 ~r~~~~-----~~~~----~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~---~s~~~~~~~~~--~~~~~~~~l~ 277 (471)
..++|. +.+. ..+++ .+.++..+.+++|+++......+++... .++.++.++.. +++..+..+.
T Consensus 237 l~~~ek~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~l 314 (495)
T KOG2533|consen 237 LTDEEKELVVERLRESPSGGIENK--FKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLL 314 (495)
T ss_pred cchHHHHHHHHHHHhccCCCcccc--cCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccc
Confidence 111110 0000 00111 2345667778999998877766655431 22222333322 2444456677
Q ss_pred HHHHHHHHHHHhhhhhhhcccC
Q 012075 278 NVFYWGAQMLGSVGIGYIFDFS 299 (471)
Q Consensus 278 ~~~~~i~~i~g~~~~g~l~D~~ 299 (471)
++.+.++.+++.+++|.++||.
T Consensus 315 s~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 315 STPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred cchHHhhhHHHHHHHHHHHHHH
Confidence 8889999999999999999993
No 61
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.77 E-value=1.9e-16 Score=160.52 Aligned_cols=307 Identities=13% Similarity=0.089 Sum_probs=176.2
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++...+...+.......+.++++|+++||+|||+.++++.+...+...... ..++.+.+++.|++.|++.+..+++.
T Consensus 44 s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~~~l~g~~~~~~~~~~ 120 (400)
T PRK11646 44 AAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMA---IAHEPWLLWLSCILSGLGGTLFDPPR 120 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555566666679999999999999999999988776443332 35788999999999999999888888
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCC
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDD 215 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~ 215 (471)
.+++.|..|+++||+++|+.....++|..+||.++..+. . .+|++..+ +..+..++..++..+..|+++.++
T Consensus 121 ~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~----~g~~~~f~-~~~~~~~~~~i~~~~~~~~~~~~~-- 192 (400)
T PRK11646 121 TALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-Q----YDFRLVCA-TGAVLFVLAAAFNAWLLPAYKLST-- 192 (400)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H----hhHHHHHH-HHHHHHHHHHHHHHHhCCcccccc--
Confidence 888999999999999999999999999999999874333 2 13443333 222232322223233333321100
Q ss_pred CCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHh---Hhhhcccccccc-ccccchhhhHHHHHHHHHHHHhhh
Q 012075 216 GTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNF---FYSYQFNNVNGL-QFNLRTRGLNNVFYWGAQMLGSVG 291 (471)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~---~~s~~~~~~~~~-~~~~~~~~l~~~~~~i~~i~g~~~ 291 (471)
++++.++.++ +.+++|+++........... .....++.+... ..+..+.+......+++.+.+...
T Consensus 193 -------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~ 262 (400)
T PRK11646 193 -------VRTPVREGMT---RVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYP 262 (400)
T ss_pred -------cchhhHHHHH---HHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHH
Confidence 0111222222 33455655433222111111 011111333222 223233444444455555555555
Q ss_pred hhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHHH
Q 012075 292 IGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSMV 371 (471)
Q Consensus 292 ~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 371 (471)
.+++.||+ ++.++....+.... .+.... +.. . +++.......++++.+.....+..
T Consensus 263 ~~~~~~~r-~~~~~~~~~~~~~~-~~~~~~----l~~----~--------------~~~~~~~~~~~l~~~g~~~~~p~~ 318 (400)
T PRK11646 263 IARWSEKR-FRLEHRLMAGLLIM-SLSMFP----IGM----V--------------SNLQQLFTLICLFYIGSIIAEPAR 318 (400)
T ss_pred HHHHHHHh-cchhHHHHHHHHHH-HHHHHH----HHH----h--------------hhHHHHHHHHHHHHHHHHHHHccH
Confidence 56666652 44444333332222 111111 100 0 111122333445666666666666
Q ss_pred HHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 372 YWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 372 ~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
..++.+..+ +++++++.|+++...++|.+++..+..
T Consensus 319 ~~~~~~~~p-~~~~g~~~g~~~~~~~~g~~ig~~l~G 354 (400)
T PRK11646 319 ETLSASLAD-ARARGSYMGFSRLGLALGGAIGYIGGG 354 (400)
T ss_pred HHHHHhcCC-cccchhhhhHHHHHHHHHHHhcccchH
Confidence 667777773 446689999998888888887766554
No 62
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.76 E-value=1.2e-16 Score=157.72 Aligned_cols=285 Identities=20% Similarity=0.236 Sum_probs=191.8
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++...+...+.......+++++.|+++||+|||+.+.++.+...+...... ..++.+.++++|++.|++.+..++..
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~g~~~~~~~~~~ 108 (352)
T cd06174 32 SASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA---FASSLWLLLVGRFLLGLGGGALYPAA 108 (352)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHcccccccHhH
Confidence 345556666777777888999999999999999999999987766443332 24789999999999999999999999
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCC
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDD 215 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~ 215 (471)
..++.|+.|+|+|++.+++......+|..+|+.+...+... .+|++. +....++.++..+...++.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~--------- 174 (352)
T cd06174 109 AALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES----LGWRWL-FLILAILGLLLALLLLFLL--------- 174 (352)
T ss_pred HHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH----hhHHHH-HHHHHHHHHHHHHHHHHHH---------
Confidence 99999999999999999999999999999999987544321 123332 2232333333322222221
Q ss_pred CCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHh---Hhhhcccccccc--ccccchhhhHHHHHHHHHHHHhh
Q 012075 216 GTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNF---FYSYQFNNVNGL--QFNLRTRGLNNVFYWGAQMLGSV 290 (471)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~---~~s~~~~~~~~~--~~~~~~~~l~~~~~~i~~i~g~~ 290 (471)
|+++......+.... .+....+.+... +++..+.+......+++.+++.+
T Consensus 175 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 229 (352)
T cd06174 175 -------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGAL 229 (352)
T ss_pred -------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 222211111111111 111111222222 23444566777888999999999
Q ss_pred hhhhhcccCCCCccc-eeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHH
Q 012075 291 GIGYIFDFSFPTRRK-RGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQS 369 (471)
Q Consensus 291 ~~g~l~D~~~~gRr~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 369 (471)
+.+++.|| .|||+ ....+..... +...... . . .+........++.+++.+...+
T Consensus 230 ~~~~~~~~--~~~~~~~~~~~~~~~~-i~~~~~~-----~--------------~---~~~~~~~~~~~~~g~~~~~~~~ 284 (352)
T cd06174 230 LGGLLSDR--LGRRRLLLLIGLLLAA-LGLLLLA-----L--------------A---PSLALLLVALLLLGFGLGFAFP 284 (352)
T ss_pred HHHHHHHH--HHhhhHHHHHHHHHHH-HHHHHHH-----H--------------h---ccHHHHHHHHHHHHHHHhccch
Confidence 99999999 78887 5555544331 1111110 0 0 1122356677788888888888
Q ss_pred HHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 370 MVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 370 ~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
....++.|..+ ++++++.+++.+..++++..++..+..
T Consensus 285 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~i~g 322 (352)
T cd06174 285 ALLTLASELAP-PEARGTASGLFNTFGSLGGALGPLLAG 322 (352)
T ss_pred hHHHHHHhhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888899884 356699999999999998888877654
No 63
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.76 E-value=1.4e-16 Score=159.94 Aligned_cols=305 Identities=16% Similarity=0.106 Sum_probs=165.7
Q ss_pred HHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchH--------HHHHHHHHHhhhhhHHHhhhhhhh
Q 012075 68 YTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQA--------FAIAAGAILGIGAGLLWAAEGAIM 139 (471)
Q Consensus 68 ~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~--------~li~~r~l~G~g~g~~~~~~~~~i 139 (471)
+....+++++.|+++||+|||+++.++.+++.+..... ..+++.+ .++++|+++|++.+..++....++
T Consensus 45 ~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~ 121 (394)
T TIGR00883 45 FLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI---GLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYL 121 (394)
T ss_pred HHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH---hhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHh
Confidence 33345678999999999999999999998776533222 2245543 588999999999999999999999
Q ss_pred ccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCC--ccccccch-hHHHHHHHHHHHHHHHhccCCCcc-ccCC
Q 012075 140 TSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNE--AVSVNDGT-YIGFMCFMSAGALLSLVILPPGRV-IRDD 215 (471)
Q Consensus 140 ~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~i~~~~l~~p~~~-~r~~ 215 (471)
.|..|+++||+..++......+|.++|+.+........++ ...+.|+. +++..++..+..++. ...|+++. ++++
T Consensus 122 ~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 200 (394)
T TIGR00883 122 AEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLR-RNLEETPVFEKAQ 200 (394)
T ss_pred hhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHH-HhcCCChhHHHHH
Confidence 9999999999999999999999999998876433211000 01122222 222222222221111 11121111 1110
Q ss_pred CCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHhHh---hhcccccccc--ccccchhhhHHHHHHHHHHHHhh
Q 012075 216 GTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNFFY---SYQFNNVNGL--QFNLRTRGLNNVFYWGAQMLGSV 290 (471)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~---s~~~~~~~~~--~~~~~~~~l~~~~~~i~~i~g~~ 290 (471)
++ .++++++ .++.++.. +++++......+.....+ ....+.+... +.+....+.......++.+++.+
T Consensus 201 ~~--~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 273 (394)
T TIGR00883 201 EK--HKKKRGP----IRETLTKH-RKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIP 273 (394)
T ss_pred hc--cccccCC----HHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHH
Confidence 00 0011112 22222211 112333322222222111 1111333222 23333455566677888999999
Q ss_pred hhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHH
Q 012075 291 GIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSM 370 (471)
Q Consensus 291 ~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 370 (471)
+.|++.|| +|||+....+..++..+..... .... . . ..........++.++..+...+.
T Consensus 274 ~~g~l~dr--~g~~~~~~~~~~~~~~~~~~~~---~~~~---~-----------~--~~~~~~~~~~~~~g~~~~~~~~~ 332 (394)
T TIGR00883 274 LSGALSDR--IGRRPVLIIFTVLAALLAVPLL---MALL---D-----------S--GSFTLFFFLVLGLALIGGMYTGP 332 (394)
T ss_pred HHHHHHHH--hchHHHHHHHHHHHHHHHHHHH---HHHh---c-----------C--CchHHHHHHHHHHHHHHHHHhhh
Confidence 99999999 7888865433322211111111 1000 0 0 11222344556667777777777
Q ss_pred HHHHHHHhcCCchhhhHHHHHHH-HHHHHHHHHHhh
Q 012075 371 VYWVIGALADDSETLSRYSGFYK-GVQSAGAAVAWQ 405 (471)
Q Consensus 371 ~~~~i~~~~~~~~~~~~~~~~~~-~~~s~g~~i~~~ 405 (471)
...++.|.+++ ++++++.++.. ....++..++-.
T Consensus 333 ~~~~~~~~~p~-~~~~~~~~~~~~~~~~~g~~~~p~ 367 (394)
T TIGR00883 333 MGSFLPELFPT-EVRYTGASLAYNLAGAIFGGFAPY 367 (394)
T ss_pred HHHHHHHhCCc-cceeeEeeehhHhHHHHHhhHHHH
Confidence 88888999843 23466666533 223344444433
No 64
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.76 E-value=9e-17 Score=168.61 Aligned_cols=110 Identities=9% Similarity=0.131 Sum_probs=95.6
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEG 136 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~ 136 (471)
........++.+++..+|++++|+++|++|||++++++.+++.++.... +.++|++.+++.|++.|++.+...+...
T Consensus 117 ~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~---a~a~~~~~~~~~Rfl~G~~~~~~~~~~~ 193 (521)
T KOG0255|consen 117 STLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILT---AFAPNYWMFLIFRFLSGFFGSGPLTVGF 193 (521)
T ss_pred HhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHH---HHhCcHHHHHHHHHHHHhhccchhHHhH
Confidence 4456778889999999999999999999999999999999888755333 4589999999999999999999999999
Q ss_pred hhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 137 AIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 137 ~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
.+++|+.++++|+....+ ......+..+++...
T Consensus 194 ~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~ 226 (521)
T KOG0255|consen 194 GLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGA 226 (521)
T ss_pred hhheeecCcchhhHHHHH-HHHHHHHHHHHHHHH
Confidence 999999999999999999 666666666666654
No 65
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.75 E-value=5.7e-16 Score=156.59 Aligned_cols=310 Identities=13% Similarity=0.049 Sum_probs=179.3
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
.++...+...+.......++++++|+++||+|||+.+.++.+...+..... ..+++.+.+++.|++.|++.+...+.
T Consensus 40 ~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~g~~~~~~~~~ 116 (394)
T PRK11652 40 VREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVA---LFAHSLTVLIAASAIQGLGTGVGGVM 116 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH---HHHccHHHHHHHHHHHHhhhhHHHHH
Confidence 345555666777788888999999999999999999999988766533322 23578999999999999999987777
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccC
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRD 214 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~ 214 (471)
...+..|..++++|+++.+++.....+|..+||.++..+... .+|++..+ ...+...+..++..++.|+++. +
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~----~g~~~~f~-~~~~~~~~~~~~~~~~~~~~~~-~- 189 (394)
T PRK11652 117 ARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL----FGWRACYL-FLLLLGAGVTFSMARWMPETRP-A- 189 (394)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cChHHHHH-HHHHHHHHHHHHHHHhCCccCc-c-
Confidence 777888888999999999999999999999999887433211 23443332 2222222222222233332211 1
Q ss_pred CCCccccccCCCHHHHHHHHHHHhcchhHHHHHH--HHHHhHh--Hhhhcccccccc--ccccchhhhHHHHHHHHHHHH
Q 012075 215 DGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFP--ASWASNF--FYSYQFNNVNGL--QFNLRTRGLNNVFYWGAQMLG 288 (471)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~--~~~~~~~--~~s~~~~~~~~~--~~~~~~~~l~~~~~~i~~i~g 288 (471)
++ ++++.++.++ +.+++|+++.... .....+. +.... +.+... +++....++......++.+++
T Consensus 190 -~~-----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~g 259 (394)
T PRK11652 190 -DA-----RRTRVLASYR---TLLSNRRFNCYLLMLIGTLAGIAVFEACS-GVLMGAVLGLSSMTVSILFILPIPAAFFG 259 (394)
T ss_pred -cc-----chhHHHHHHH---HHHcChHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 00 1111222222 2344554432211 1111111 11111 222222 223334455566677888888
Q ss_pred hhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHH
Q 012075 289 SVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQ 368 (471)
Q Consensus 289 ~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 368 (471)
+.+.+++.|| .+|+. ..+...+ .+...... .... . . . ..........++++++.+...
T Consensus 260 ~~~~~~l~~~--~~~~~--~~~~~~~-~~~~~~~~-~~~~----~--------~--~--~~~~~~~~~~~~~~~g~~~~~ 317 (394)
T PRK11652 260 AWFAGRPNKR--FSTLM--WQSVICC-LLAGLLMW-IPGW----F--------G--V--MNVWTLLVPAALFFFGAGMLF 317 (394)
T ss_pred HHHHHHHHHH--HHHHH--HHHHHHH-HHHHHHHH-HHHH----h--------c--c--ccHHHHHHHHHHHHHHHHHHH
Confidence 8888888887 34322 1221111 11111111 0000 0 0 0 111223444556677777777
Q ss_pred HHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 369 SMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 369 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
+.......+..+ ++.+++.++.+..+++|.+++-.+..
T Consensus 318 ~~~~~~~~~~~~--~~~g~~~~~~~~~~~lg~~~~~~~~~ 355 (394)
T PRK11652 318 PLATSGAMEPFP--YLAGTAGALLGGLQNIGSGLAALLSA 355 (394)
T ss_pred HHHHHHHHhhcc--ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 776666666663 45578888888888888887776554
No 66
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.75 E-value=9e-16 Score=153.68 Aligned_cols=306 Identities=13% Similarity=0.078 Sum_probs=167.7
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHH-HHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACST-YVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~-~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
++...+...+.......+.+++.|+++||+|||+.+++.... ..+.. .. .+.+++++.+++.|++.|.+.+...+.
T Consensus 31 s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~--~~-~~~~~~~~~l~~~~~~~g~~~~~~~p~ 107 (375)
T TIGR00899 31 RPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALAC--LL-FAWNRNYFLLLVLGVLLSSFASTANPQ 107 (375)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHH--HH-HHhcchHHHHHHHHHHHHhhhhhhHHH
Confidence 344445555555566677788999999999999877664433 32211 12 233678899999999998887777777
Q ss_pred hhhhhccCCCCCchhhH--HHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccc
Q 012075 135 EGAIMTSYPPPNRKGTY--ISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVI 212 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~--~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~ 212 (471)
...+..|..|+++|++. .+......++|..+|+.++..+... .+|++. +++..+...+..++..++.|+++.+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~----~~~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~ 182 (375)
T TIGR00899 108 LFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG----FGFTVM-FLTAALAFVLCGVLVWLFLPSYPRG 182 (375)
T ss_pred HHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh----cccHHH-HHHHHHHHHHHHHHHHHhCCCcccC
Confidence 77778888777777754 5777788889999999887433211 234433 3333333333333333333422111
Q ss_pred cCCCCccccccCCCHHHHHHHHHHHhcchhHHHHH--HHHHHhH-hHhhhcccccccc--ccccchhhhHHHHHHHHHHH
Q 012075 213 RDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIF--PASWASN-FFYSYQFNNVNGL--QFNLRTRGLNNVFYWGAQML 287 (471)
Q Consensus 213 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~--~~~~~~~-~~~s~~~~~~~~~--~~~~~~~~l~~~~~~i~~i~ 287 (471)
+++ + +++ ++.++ .+++|+..... ....+.. ..+...++.+... +.+..+.+..........++
T Consensus 183 ~~~-~----~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~ 250 (375)
T TIGR00899 183 APG-A----LTR----LEVRG---LLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIP 250 (375)
T ss_pred ccc-c----cCc----chhhh---hhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 110 0 001 11111 22334332221 1111111 1111111333221 22333344444444556677
Q ss_pred HhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHH
Q 012075 288 GSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMF 367 (471)
Q Consensus 288 g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 367 (471)
+.++.|++.|| +|||+...++.... .+.... +... ++.+......++.+++.+..
T Consensus 251 ~~~~~g~l~~r--~g~~~~~~~~~~~~-~~~~~~----~~~~------------------~~~~~~~~~~~~~g~~~g~~ 305 (375)
T TIGR00899 251 FMLLAGYLIKR--FGKRRLMLLAALAG-VAFYTG----LAAD------------------NSLWALLMLQLLNAIFIGIL 305 (375)
T ss_pred HHHhHHHHHHH--hcchhHHHHHHHHH-HHHHHH----HHHH------------------HHHHHHHHHHHHHHHHHHHH
Confidence 78888999999 78888654443221 111111 1000 11122344455666666666
Q ss_pred HHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 368 QSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 368 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
.+....+..|..++ +++++.++++....+|.+++..+..
T Consensus 306 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~g~~~~g 344 (375)
T TIGR00899 306 AGIGMLYFQDLMPG--RAGAATTLYTNTGRVGWIIAGSVGG 344 (375)
T ss_pred HHHHHHHHHHhCcc--hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666677887743 3468889998888888888766554
No 67
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.74 E-value=8.3e-18 Score=164.62 Aligned_cols=239 Identities=14% Similarity=0.076 Sum_probs=151.6
Q ss_pred CCCCCCChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhh
Q 012075 50 GGGGQVDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAG 129 (471)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g 129 (471)
+...+.++...++...+....+.+.++++|.++||+.||+++.+|..++.+...+. +.+..+|++.++|.+.|+|.+
T Consensus 60 ~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~---~fs~~Fwq~~l~R~~vGiGeA 136 (493)
T KOG1330|consen 60 QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFAS---GFSNHFWQVLLCRGFVGIGEA 136 (493)
T ss_pred HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHH---HHHHHHHHHHHHHHHhccchh
Confidence 33344455545555667777888999999999999999999999999887644332 335789999999999999999
Q ss_pred HHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHH-HHhccCC
Q 012075 130 LLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALL-SLVILPP 208 (471)
Q Consensus 130 ~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~l~~p 208 (471)
...+.++..++|.+|.++|++.+++|+....+|..+|.+++...... +..|||.... -.++.++..++ .++.++|
T Consensus 137 s~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~---~~~Wr~af~~-~avl~vi~~~L~~~f~~eP 212 (493)
T KOG1330|consen 137 SYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASL---TFWWRWAFRG-SAVLGVIVGLLVFLFVREP 212 (493)
T ss_pred hhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccC---ccceEEEEEe-ehHHHHHHHHHHHhhccCc
Confidence 99999999999999999999999999999999999999887433222 2236655443 33444444333 4445556
Q ss_pred CccccCCCCc-ccc-ccCCCHHHHHHHHHHHhcchhHHH----HHHHHHHhHhHhhhcccccccc-----ccccchhhhH
Q 012075 209 GRVIRDDGTH-CTN-IKYSNVSTEITQVLKLFSNWKMLL----IFPASWASNFFYSYQFNNVNGL-----QFNLRTRGLN 277 (471)
Q Consensus 209 ~~~~r~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~ll----~~~~~~~~~~~~s~~~~~~~~~-----~~~~~~~~l~ 277 (471)
++-.+++.+. ... .+..+.+ |+++...+.|...+ .....+-.| .+++..+.+..+ +++.+.....
T Consensus 213 ~rga~~~~~~~~~~~~~~ts~~---kDl~~l~~~~v~v~~sl~~~a~~fv~G-s~sww~p~~~~~~~~~~~~~~~~~~if 288 (493)
T KOG1330|consen 213 ERGARDEVDGENKMVKPFTSVW---KDLKVLAKIKVFVLSSLGIIAAQFVIG-SLSWWAPAFIYYSYELIGFDHNATLIF 288 (493)
T ss_pred ccccccccccCCcCCCCccchH---HHHHHHHccCceeeehHHHHHHHHhcc-ccchhhhhHHHHHHHHhCCccccchhh
Confidence 5432222111 110 1122333 44433344332211 111111111 122222332221 2333334445
Q ss_pred HHHHHHHHHHHhhhhhhhcccC
Q 012075 278 NVFYWGAQMLGSVGIGYIFDFS 299 (471)
Q Consensus 278 ~~~~~i~~i~g~~~~g~l~D~~ 299 (471)
..+..+++.+|.+.+|.++||.
T Consensus 289 g~vt~~~G~lGvl~Ggiisd~~ 310 (493)
T KOG1330|consen 289 GGVTCAGGSLGVLFGGIISDKL 310 (493)
T ss_pred hhHHHhhchhhheehHHHHHHH
Confidence 5667888899999999999983
No 68
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.74 E-value=1.1e-15 Score=174.91 Aligned_cols=327 Identities=14% Similarity=0.031 Sum_probs=185.6
Q ss_pred hhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhh
Q 012075 59 AANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAI 138 (471)
Q Consensus 59 ~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~ 138 (471)
..++..++..+.+.+.++++|+++||+|||+++......-++..+........++++.++++|+++|++.++.+++..++
T Consensus 53 ~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~ 132 (1140)
T PRK06814 53 LVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSI 132 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHh
Confidence 34555666677788899999999999999997644222111111111111124789999999999999999999999999
Q ss_pred hccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCCCCc
Q 012075 139 MTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDDGTH 218 (471)
Q Consensus 139 i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~~~~ 218 (471)
+.++.++++|++++|+.++..++|.++||.++..+... .+|++ .++...+..++..++..++ |+++..+ ++.+
T Consensus 133 l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~----~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~ 205 (1140)
T PRK06814 133 LPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATIS----GNFVI-LVALLMGIAVLGWLASLFI-PKTGNAA-PDLK 205 (1140)
T ss_pred hHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhc----cccHH-HHHHHHHHHHHHHHHHhhC-CCCCCCC-CCCe
Confidence 99999999999999999999999999999998444321 12322 2222222222222222233 3221111 1100
Q ss_pred cccccCCCHHHHHHHHHHH-hcchhHHHHHHHHHHhHhHh---hhccccccccc--cccchhhhHHHHHHHHHHHHhhhh
Q 012075 219 CTNIKYSNVSTEITQVLKL-FSNWKMLLIFPASWASNFFY---SYQFNNVNGLQ--FNLRTRGLNNVFYWGAQMLGSVGI 292 (471)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~-~~~~~~ll~~~~~~~~~~~~---s~~~~~~~~~~--~~~~~~~l~~~~~~i~~i~g~~~~ 292 (471)
.+.+..++..+.++. .++|.++......+...+.. ...++.+.... .+....++.....+++.++|.++.
T Consensus 206 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~ 281 (1140)
T PRK06814 206 ----IDRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLA 281 (1140)
T ss_pred ----eccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 111222222233333 34555544443333222111 11113333222 233345667778899999999999
Q ss_pred hhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCcc----C-CCCCCCCchhHHHHHHHHHhhHHHH
Q 012075 293 GYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKL----D-FKNSGSDFAGPFVLYFCYGLLDAMF 367 (471)
Q Consensus 293 g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~g~~~~~~ 367 (471)
|++.|+ .++++....+.+++....+.+ . ......... +... . +.. .+.+...+..+++|++.+..
T Consensus 282 g~l~~~--~~~~~~~~~~~~~~~~~~~~l-~--~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~ 351 (1140)
T PRK06814 282 SKLSEG--RITLLYVPIGALLMGLFGLDL-A--FASSSVPAE---PAQLKSILVFLSK--RHGWRILIDLFGLAAAGGLY 351 (1140)
T ss_pred HHHhCC--ceeeeeehHHHHHHHHHHHHH-H--hcccccccc---cccccchhhhhcc--cccHHHHHHHHHHHHHHHHh
Confidence 999987 344444444433332111111 1 000000000 0000 0 000 12223455667778888888
Q ss_pred HHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 012075 368 QSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVD 407 (471)
Q Consensus 368 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~ 407 (471)
++...+++.+..+ ++.+++++|+.+.+..++.+++-.+.
T Consensus 352 ~~~~~~~~~~~~p-~~~~G~v~g~~~~~~~~~~~ig~~~~ 390 (1140)
T PRK06814 352 IVPLFAALQAWAN-PAHRARVIAANNVLNAAFMVAGTIIL 390 (1140)
T ss_pred HHHHHHHHHhhCC-cccceeeeHHHHHHHHHHHHHHHHHH
Confidence 8888888888773 33558999999998888777766543
No 69
>PRK10054 putative transporter; Provisional
Probab=99.72 E-value=2.1e-15 Score=152.58 Aligned_cols=307 Identities=11% Similarity=0.030 Sum_probs=173.8
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++...+...+.......+++++.|.++||+|||++++++.+...+..... ..+++.+.++++|.+.|.+.+...+..
T Consensus 41 s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~ 117 (395)
T PRK10054 41 SVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAI---PLVNNVTLVVLFFALINCAYSVFSTVL 117 (395)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555666666677778888999999999999999999987665432222 235778888889999998888777778
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCC
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDD 215 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~ 215 (471)
..+..|..|+++|++..++.....++|..+||.++..+. . .+|++. +....++..+..++..+..|+++.++++
T Consensus 118 ~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~-~----~g~~~~-f~~~~~~~~i~~i~~~~~~~~~~~~~~~ 191 (395)
T PRK10054 118 KAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV-M----QSINLP-FWLAAICSAFPLVFIQIWVQRSEKAIAT 191 (395)
T ss_pred HHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H----hccCcH-HHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 888899999999999999999999999999999874332 2 134443 3333333333333333322321111110
Q ss_pred CCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHhHhhh---ccccccc--cccc--cchhhhHHHHHHHHHHHH
Q 012075 216 GTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNFFYSY---QFNNVNG--LQFN--LRTRGLNNVFYWGAQMLG 288 (471)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~s~---~~~~~~~--~~~~--~~~~~l~~~~~~i~~i~g 288 (471)
+ +++. .+..+.+++|+++......+...+.++. ..+.+.. ...+ ....+.......+..+..
T Consensus 192 ~-------~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 260 (395)
T PRK10054 192 E-------TGSV----WSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSL 260 (395)
T ss_pred c-------hhhh----hhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeee
Confidence 0 0000 1112335566654443332222211110 1111111 1111 112234444445555555
Q ss_pred hhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHH
Q 012075 289 SVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQ 368 (471)
Q Consensus 289 ~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 368 (471)
....+++.|| .+||+....+.... .+..... .. . . .+.....+..++++++.....
T Consensus 261 ~~~~g~~~~~--~~~~~~l~~~~~~~-~~~~~~~----~~----~----------~---~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 261 QYSVGRRLNA--ANIRPLMTAGTLCF-VIGLVGF----IF----S----------G---NSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred hhHHHHHHcc--CCchhHHHHHHHHH-HHHHHHH----HH----c----------c---hHHHHHHHHHHHHHHHHHHHH
Confidence 5667888898 67887665554322 1111111 10 0 0 111223344556777777766
Q ss_pred HHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 369 SMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 369 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
+.....+.+..++ +.++++++..+ ...+|.+++-....
T Consensus 317 p~~~~~~~~~~p~-~~~~~~~~~~~-~~~~G~~~Gp~~~G 354 (395)
T PRK10054 317 PGEYMLIDHIAPP-GMKASYFSAQS-LGWLGAAINPLVSG 354 (395)
T ss_pred hhHHHHHHHhCCc-ccceehHhHHH-HHHHHHHHHHHHHH
Confidence 6666677776633 34477776544 33456666655443
No 70
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.72 E-value=1.1e-14 Score=151.02 Aligned_cols=313 Identities=14% Similarity=0.091 Sum_probs=187.2
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhh--cccchHHHHHHHHHHhhhhhHHHhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYN--HHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~--~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
+....+......+-..+.++++|.++||+.||+.++.+-++..+......... ...+.|.+++.-++.|++.++..++
T Consensus 44 ~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA 123 (524)
T PF05977_consen 44 PLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPA 123 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444455555667788999999999999999999876544322221111 1347889999999999999999999
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccC
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRD 214 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~ 214 (471)
..+++.|+.|+++..++.++.....++..++||.++..+.... +..+ .+.+-. +..+..+..+...+++.. ++
T Consensus 124 ~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~----G~~~-~f~ina-lsfl~~i~~l~~~~~~~~-~~ 196 (524)
T PF05977_consen 124 WQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFF----GAAA-AFLINA-LSFLISILALLRWKPPPP-PS 196 (524)
T ss_pred HHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHH----HHHH-HHHHHH-HHHHHHHHHHHHcccccc-cc
Confidence 9999999999999999999999999999999999874333211 1111 222222 222222222222222111 10
Q ss_pred CCCccccccCCCHHHHHHHHHHHhc-chhHHHHHHHHHHhHhHhh---hccccccccccc--cchhhhHHHHHHHHHHHH
Q 012075 215 DGTHCTNIKYSNVSTEITQVLKLFS-NWKMLLIFPASWASNFFYS---YQFNNVNGLQFN--LRTRGLNNVFYWGAQMLG 288 (471)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ll~~~~~~~~~~~~s---~~~~~~~~~~~~--~~~~~l~~~~~~i~~i~g 288 (471)
+ .++++..+++++-++..+ +|.+.......+..+++.+ ..++.+....++ ...-++...+.++|.++|
T Consensus 197 ~------~~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~G 270 (524)
T PF05977_consen 197 S------LPRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILG 270 (524)
T ss_pred c------cchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHH
Confidence 0 123345566666666554 3443322221122222111 111222222222 234567778899999999
Q ss_pred hhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHH
Q 012075 289 SVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQ 368 (471)
Q Consensus 289 ~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 368 (471)
+++.+++.+| .++++....+.+..+ +..+. +. .. ++.+..++..++.|++....+
T Consensus 271 al~~~~l~~~--~~~~~lv~~~~~~~a-~~~~~----la---------------l~---~~~~~~~~~l~l~G~~~~~~~ 325 (524)
T PF05977_consen 271 ALLLPRLRRR--LSSRRLVLLASLLFA-LALLL----LA---------------LS---PSFWLALIALFLAGAAWIIAN 325 (524)
T ss_pred HHHHHHhhcc--cCcchhhHHHHHHHH-HHHHH----Hh---------------cc---hHHHHHHHHHHHHHHHHHHHH
Confidence 9999988776 566654444433221 11111 11 01 223344556667777777777
Q ss_pred HHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 369 SMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 369 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
+...+.+.+..+ +..++|++++++.....+.+++..+..
T Consensus 326 ~~~~t~~Q~~~P-~~~~GRv~si~~~~~~g~~~lGsll~G 364 (524)
T PF05977_consen 326 SSLNTLVQLSVP-DWVRGRVFSIYQMVFFGGMPLGSLLWG 364 (524)
T ss_pred HHHHHHHHHhCC-HHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666655553 445699999999988888887766543
No 71
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.72 E-value=9e-16 Score=149.10 Aligned_cols=243 Identities=15% Similarity=0.124 Sum_probs=159.2
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
.+..+.+...+..+..++++.++.|.++||.+.|..+-++.+.-.+.. +....+++.+.+.+.-+++|+..|..|+.
T Consensus 61 lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~n---il~Gfs~s~~~~~~l~~lng~fQg~Gwpp 137 (448)
T COG2271 61 LSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVN---ILFGFSPSLFLFAVLWVLNGWFQGMGWPP 137 (448)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHH---HHHhhhhHHHHHHHHHHHHHHHhcCCCcH
Confidence 344555677788899999999999999999999999999987665422 22344678899999999999999999999
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHH--HHhhccCCCccccccchhHHHHHHHHHHHHHHHh-ccC-CCc
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIP--FILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLV-ILP-PGR 210 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-l~~-p~~ 210 (471)
....++.+.++++||+..++++...++|..+.+.+. ..+..+ .+|+..+ +...++.++..+..++ .++ |+.
T Consensus 138 ~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~----~~w~~~f-~~pgiiaiival~~~~~~rd~Pqs 212 (448)
T COG2271 138 CARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH----GGWRAAF-YFPGIIAIIVALILLFLLRDRPQS 212 (448)
T ss_pred HHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc----cchhHHH-HHHHHHHHHHHHHHHHHhCCCccc
Confidence 999999999999999999999999999998877765 222221 2344443 3444343333333333 332 433
Q ss_pred c-------ccCCCCcc-ccc-cC--CCHHHHHHHHHHHhcchhHHHHHHHHHHhHhH-hh--hccccccc--cccccchh
Q 012075 211 V-------IRDDGTHC-TNI-KY--SNVSTEITQVLKLFSNWKMLLIFPASWASNFF-YS--YQFNNVNG--LQFNLRTR 274 (471)
Q Consensus 211 ~-------~r~~~~~~-~~~-~~--~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~-~s--~~~~~~~~--~~~~~~~~ 274 (471)
. -|.|+.+. .++ ++ .+.+|.+.+ ..+++|.++++...-.+.-.. |+ ..-+.++. .+++....
T Consensus 213 ~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~--YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a 290 (448)
T COG2271 213 EGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVK--YVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKA 290 (448)
T ss_pred cCCCCHHHhhcCchhhhhhhccCCCccHHHHHHH--HHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHH
Confidence 2 12222221 111 11 223333322 235777777666543332211 00 00133332 35566566
Q ss_pred hhHHHHHHHHHHHHhhhhhhhcccCCCCcccee
Q 012075 275 GLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRG 307 (471)
Q Consensus 275 ~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~ 307 (471)
......+=++.+.|++++|+++||..-|||...
T Consensus 291 ~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~ 323 (448)
T COG2271 291 NWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPM 323 (448)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhcccccchH
Confidence 666777889999999999999999644787643
No 72
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.71 E-value=2e-15 Score=150.42 Aligned_cols=302 Identities=13% Similarity=0.034 Sum_probs=171.4
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
.++...+...+..+.+..+++++.|+++||+|||+.+.++.++..+..... .+++.+.+++.|++.|++.+...+.
T Consensus 32 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~g~g~~~~~~~ 107 (355)
T TIGR00896 32 MSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR----SAPGTALLFAGTALIGVGIAIINVL 107 (355)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH----HhccHHHHHHHHHHHHHHHHHHhcc
Confidence 345556677788888889999999999999999999999987765533222 2578889999999999999998877
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccC
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRD 214 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~ 214 (471)
.+.++.|..| ++|++++++++....+|..+|+.+...+..... ..|++. +....+...+. .....|+++. ++
T Consensus 108 ~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~--~~w~~~-f~~~~~~~~~~---~~~~~~~~~~-~~ 179 (355)
T TIGR00896 108 LPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSG--GHWQQA-LAWWALPALLA---LLAWIPQVRR-RV 179 (355)
T ss_pred chHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hhHHHH-HHHHHHHHHHH---HHHHhhhhcc-cc
Confidence 8888888864 689999999999999999999887643321110 113322 22222221111 1112221111 11
Q ss_pred CCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHh-Hhh--hccccccc-cccccchhhhHHHHHHHHHHHHhh
Q 012075 215 DGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNF-FYS--YQFNNVNG-LQFNLRTRGLNNVFYWGAQMLGSV 290 (471)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~-~~s--~~~~~~~~-~~~~~~~~~l~~~~~~i~~i~g~~ 290 (471)
++++ . .++.. ..+.+++|+.+........... .+. ...+.+.. .+++..+.+......+++.+++++
T Consensus 180 ~~~~-~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~ 250 (355)
T TIGR00896 180 AANQ-T-TTRLT-------PVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASAL 250 (355)
T ss_pred CCCC-C-CCCCC-------CchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1000 0 00011 1122345554433322222111 111 11133322 234444556667778999999999
Q ss_pred hhhhhcccCCC-CccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHH
Q 012075 291 GIGYIFDFSFP-TRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQS 369 (471)
Q Consensus 291 ~~g~l~D~~~~-gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 369 (471)
+.|++.|| + +||+....+...+ .++.... .+. + + .. .....+++|++.+...+
T Consensus 251 ~~g~l~dr--~~~~~~~~~~~~~~~-~~~~~~~----~~~---~--------~-----~~---~~~~~~l~g~~~g~~~~ 304 (355)
T TIGR00896 251 LIPALARR--VKDQRGIVAVLAVLQ-LVGLCGL----LFA---P--------M-----HG---LWAWALVLGLGQGGAFP 304 (355)
T ss_pred hHHHHHhh--hccchHHHHHHHHHH-HHHHHHH----HHh---h--------h-----hH---HHHHHHHHHHhhhhHhH
Confidence 99999999 5 4554444433322 1111111 100 0 0 11 11134556777777766
Q ss_pred HHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHH
Q 012075 370 MVYWVIGALADDSETLSRYSGFYKGVQSAGAAVA 403 (471)
Q Consensus 370 ~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~ 403 (471)
.....+.+...++++.+...++.+.+..++.+++
T Consensus 305 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g 338 (355)
T TIGR00896 305 LALTLIGLRSRQAAQAAALSAMAQSIGYLLAALG 338 (355)
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6555555555445555666666655544444443
No 73
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.70 E-value=2.8e-15 Score=152.98 Aligned_cols=232 Identities=15% Similarity=0.199 Sum_probs=152.8
Q ss_pred hhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhh
Q 012075 59 AANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAI 138 (471)
Q Consensus 59 ~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~ 138 (471)
..++..+..+.+..++.+..+++.||+|-|+++..+.++..+...-.-. +...+.+.+++.|+++|++.|..+++...+
T Consensus 74 ~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~-aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i 152 (466)
T KOG2532|consen 74 EKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPL-AASIGFYLLLVLRFLQGLGQGVLFPAIGSI 152 (466)
T ss_pred HHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHH-HHHhcchhhHHHHHHhHHHHhHHHhhhhce
Confidence 3456677778888888899999999999999999999887763332222 123456688999999999999999999999
Q ss_pred hccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhc-c-CCCccccCCC
Q 012075 139 MTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVI-L-PPGRVIRDDG 216 (471)
Q Consensus 139 i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l-~-~p~~~~r~~~ 216 (471)
.+.++|++||++..++..+..++|.+++-.++..+ ... ..+|++..|+ +..+.++..++.+++ . .|++.++..+
T Consensus 153 ~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~l-c~s--~~GW~sifY~-~g~~g~i~~~~w~~~~~d~P~~h~~is~ 228 (466)
T KOG2532|consen 153 LAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLL-CES--SLGWPSIFYV-FGIVGLIWFILWFLFYSDSPSKHPNISE 228 (466)
T ss_pred eeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHH-hcc--CCCCchHHHH-HHHHHHHHHHHHHHHhcCCcccCCCCCH
Confidence 99999999999999999999999999887665323 221 1456666553 333444333333322 2 2443221111
Q ss_pred Cccc--------cccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHh----Hhhhccccccc--cccccchhhhHHHHHH
Q 012075 217 THCT--------NIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNF----FYSYQFNNVNG--LQFNLRTRGLNNVFYW 282 (471)
Q Consensus 217 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~----~~s~~~~~~~~--~~~~~~~~~l~~~~~~ 282 (471)
+|.+ .+.++...-.+ .+.++++.++.+....+.-.+ ...|. |+|.. .+++.++.++.+..-.
T Consensus 229 ~El~~I~~~k~~~~~~~~~~vP~---~~i~ts~~vwai~~~~f~~~~~~~~l~~y~-PtY~~~VL~f~v~~~G~~salP~ 304 (466)
T KOG2532|consen 229 KELKYIEKGKSEAHVKKKPPVPY---KAILTSPPVWAIWISAFGGNWGFYLLLTYL-PTYLKEVLGFDVRETGFLSALPF 304 (466)
T ss_pred HHHHHHHhcccccccCCCCCCCH---HHHHcCHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHhCCChhhhhHHHHHHH
Confidence 1100 00000000012 234566777665554443332 22333 66654 3677888888888888
Q ss_pred HHHHHHhhhhhhhcccC
Q 012075 283 GAQMLGSVGIGYIFDFS 299 (471)
Q Consensus 283 i~~i~g~~~~g~l~D~~ 299 (471)
+...+..+++|.++||.
T Consensus 305 l~~~~~k~~~g~lsD~l 321 (466)
T KOG2532|consen 305 LAMAIVKFVAGQLSDRL 321 (466)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999999999984
No 74
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.70 E-value=3.9e-15 Score=148.38 Aligned_cols=302 Identities=10% Similarity=-0.003 Sum_probs=162.6
Q ss_pred hchhhhhhhcc-----chhHHH-HHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCch
Q 012075 75 GILGGGIYNIL-----GPQVTL-ISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRK 148 (471)
Q Consensus 75 ~~~~g~l~d~~-----Grk~~l-~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~R 148 (471)
.+++|+++||+ |||+.+ +.+.+...+............+.+.+...+++.|++.+...++..+++.|+.|+|+|
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r 117 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEEL 117 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhh
Confidence 78999999998 899985 455554444322222211124566778888888988888888889999999999999
Q ss_pred hhHHHHHHHHHHhhhhhhhHHHHHhhccCCCc----cccccchhHHHHHHHHHHHHHHHhccCCCccccCCCCccccccC
Q 012075 149 GTYISIFWSIFNMGGVIGGLIPFILNYNRNEA----VSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDDGTHCTNIKY 224 (471)
Q Consensus 149 G~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~~~~~~~~~~ 224 (471)
+++.++......+|.++|+.+...+....+.+ .+|+.. +++..+...+..+..++..|+ +.+++++++ +++
T Consensus 118 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~-f~i~ai~~l~~~~~~~~~~~e-~~~~~~~~~---~~~ 192 (356)
T TIGR00901 118 GYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYI-FFWTALLILPGLLVTLFLAKE-PQEDASVPK---PLT 192 (356)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHH-HHHHHHHHHHHHHHHHHhccC-CCcccccch---hHH
Confidence 99999999999999999998874333221100 013222 233332323222222333332 111110000 001
Q ss_pred CCHHHHHHHHHHHhcchhHHHHHHHHHHhHh----Hhhhccccccc-cccccchhhhHHHHHH-HHHHHHhhhhhhhccc
Q 012075 225 SNVSTEITQVLKLFSNWKMLLIFPASWASNF----FYSYQFNNVNG-LQFNLRTRGLNNVFYW-GAQMLGSVGIGYIFDF 298 (471)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~----~~s~~~~~~~~-~~~~~~~~~l~~~~~~-i~~i~g~~~~g~l~D~ 298 (471)
++.++.+++.++....++.+.+....+.... .++.. +.+.. .+++..+.+......+ ++.+++.++.+++.||
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r 271 (356)
T TIGR00901 193 QAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLT-TLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQP 271 (356)
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhh
Confidence 1122233333222111124333222222111 11111 23322 2334434454444444 5678899999999999
Q ss_pred CCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHh
Q 012075 299 SFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSMVYWVIGAL 378 (471)
Q Consensus 299 ~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~ 378 (471)
+|||+....+.++.. +....+. + .... .+ . .+... +.......+.++.+++.+..++....++.|.
T Consensus 272 --~g~~~~l~~~~~~~~-~~~~~~~--~-~~~~-~~---~--~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 337 (356)
T TIGR00901 272 --LNILYALLLFGIVQA-LTNAGFV--W-LASN-GH---H--DGITF--PHLLMLFLTITLEAVTGGLGTVAFVAFLSKL 337 (356)
T ss_pred --hhHHHHHHHHHHHHH-HHHHHHH--H-HHhc-Cc---c--ccccc--chHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 888887655544332 1111111 0 0000 00 0 00000 1223345556677888888888888899999
Q ss_pred cCCchhhhHHHHHHHHHHH
Q 012075 379 ADDSETLSRYSGFYKGVQS 397 (471)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~s 397 (471)
++ ++++++.+|+++..++
T Consensus 338 ~p-~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 338 SN-PKFGATQMALLSSLSA 355 (356)
T ss_pred cC-CCccHHHHHHHHHHHh
Confidence 84 3455888888776543
No 75
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.70 E-value=2.4e-17 Score=160.76 Aligned_cols=115 Identities=15% Similarity=0.167 Sum_probs=93.4
Q ss_pred hhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccc----hHHHHHHHHHHhhhhhHHHh
Q 012075 58 TAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKH----QAFAIAAGAILGIGAGLLWA 133 (471)
Q Consensus 58 ~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~----~~~li~~r~l~G~g~g~~~~ 133 (471)
.......++.+.+-.+|+++.|++.|++|||+++....++.++.++++......++ .+.+.+.|++.|+|.|.-.+
T Consensus 84 ~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYP 163 (538)
T KOG0252|consen 84 GVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYP 163 (538)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCc
Confidence 34455666777888889999999999999999999999988775543222111111 35788999999999999999
Q ss_pred hhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHH
Q 012075 134 AEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFI 172 (471)
Q Consensus 134 ~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~ 172 (471)
...++.+|.+.+++||...+...++...|.+.|.+++..
T Consensus 164 lSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~I 202 (538)
T KOG0252|consen 164 LSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALI 202 (538)
T ss_pred chHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHH
Confidence 999999999999999999999999999998888887643
No 76
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.69 E-value=2.2e-14 Score=145.73 Aligned_cols=119 Identities=18% Similarity=0.184 Sum_probs=100.2
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
.++...+...+..+.+..++++..|++.||+|||++++++.+++.+........+..++++.+++.|++.|+|.|...++
T Consensus 35 ~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~ 114 (410)
T TIGR00885 35 LTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETA 114 (410)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhh
Confidence 44556667778888889999999999999999999999999887764433322222467899999999999999999999
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
...++.+..|+++|++.+++.+...++|..+|+.+...+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l 153 (410)
T TIGR00885 115 ANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQL 153 (410)
T ss_pred hhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999987443
No 77
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=99.69 E-value=1.5e-16 Score=137.33 Aligned_cols=116 Identities=33% Similarity=0.613 Sum_probs=108.9
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
.+++.+..++++.|..+++++++.|++.+++|.|+++++|.+.|.+|.+++++ ++.+.++.+.++.|+|.+..|++
T Consensus 34 i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~----~~~~~l~~~s~l~G~~~a~lW~a 109 (156)
T PF05978_consen 34 ISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY----PNSYTLYPASALLGFGAALLWTA 109 (156)
T ss_pred ccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHhhhhHHhhHh
Confidence 45678899999999999999999999999999999999999999999988776 67899999999999999999999
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhh
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILN 174 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~ 174 (471)
++.|+.+++++++|+|..+++|...+.+.++|+++.+...
T Consensus 110 qg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 110 QGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999986653
No 78
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.67 E-value=3.6e-14 Score=141.83 Aligned_cols=147 Identities=14% Similarity=0.068 Sum_probs=115.3
Q ss_pred CChhh-hhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHh
Q 012075 55 VDTTA-ANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWA 133 (471)
Q Consensus 55 ~~~~~-~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~ 133 (471)
.++.. .+...+..+.++++..+..|.++||+|.|+++.++.+.+.+..+.... +++.+.+.+.|++.|++.|..+
T Consensus 58 lT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~f---a~Sl~~L~i~R~llGvaEA~~~- 133 (511)
T TIGR00806 58 FTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLL---GTSVWHMQLMEVFYSVTMAARI- 133 (511)
T ss_pred CCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH-
Confidence 34444 677788889999999999999999999999999999988875544433 5679999999999999999999
Q ss_pred hhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchh--HHHHHHHHHHHHHHHhccCCCc
Q 012075 134 AEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTY--IGFMCFMSAGALLSLVILPPGR 210 (471)
Q Consensus 134 ~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~l~~p~~ 210 (471)
+...|+..+.|+++|++++|++.+...+|.++++.++..+. . .+|++-.. .+-....++++++++++.+|++
T Consensus 134 A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s----~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 134 AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-T----LGWISYSTLNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h----cCchhHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 99999999999999999999999999999999998874432 1 12332211 2333455566667777754443
No 79
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.66 E-value=4.2e-15 Score=142.81 Aligned_cols=218 Identities=15% Similarity=0.172 Sum_probs=155.1
Q ss_pred hHHHHHHHHHHHhh----hchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhh
Q 012075 61 NNANTALYTTFTIF----GILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEG 136 (471)
Q Consensus 61 ~~~~~~~~~~~~i~----~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~ 136 (471)
+...++++...++. +++.|++.||+|+|..+++|..+....++. .++..++++++++|.++|+|.+..+++..
T Consensus 105 ~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTil---Fafg~sy~~l~vAR~LQgvgsA~~~tsgl 181 (464)
T KOG3764|consen 105 NTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTIL---FAFGNSYPMLFVARSLQGVGSAFADTSGL 181 (464)
T ss_pred ccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHH---HHHcchhHHHHHHHHHhhhhHHHHHhhhH
Confidence 45566777666655 578999999999999999999876543322 24468899999999999999999999999
Q ss_pred hhhccCCCCC-chhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCC
Q 012075 137 AIMTSYPPPN-RKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDD 215 (471)
Q Consensus 137 ~~i~~~~~~~-~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~ 215 (471)
+.+++..|++ +||+++|+...+..+|.++||.++ ++.++. .+ -...|+++.++.++-..+.++..+|++.+.++
T Consensus 182 amlAd~f~~d~er~~vmGialgfislG~lvgPpfG-GilYe~---~G-k~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~ 256 (464)
T KOG3764|consen 182 AMLADVFPEDNERGSVMGIALGFISLGVLVGPPFG-GILYEF---AG-KSAPFLVLAIVLLLDGALQLLVIEPTEMDPDS 256 (464)
T ss_pred HHHHHHcccchhhhHHHHHHHHHHhccceecCCcc-cchHhh---cC-CcCcHHHHHHHHHHHHHHHHheeCccccCccc
Confidence 9999988755 689999999999999999999998 444542 11 23456666666666666777777775432211
Q ss_pred CCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHhHhhhcccccc---ccccc--cchhhhHHHHHHHHHHHHhh
Q 012075 216 GTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNFFYSYQFNNVN---GLQFN--LRTRGLNNVFYWGAQMLGSV 290 (471)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~s~~~~~~~---~~~~~--~~~~~l~~~~~~i~~i~g~~ 290 (471)
. ++. +..++.+++|.+++.......++...++.-+++- ...+. ..+.++..+...+...+++.
T Consensus 257 ~-----~~~-------~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~ 324 (464)
T KOG3764|consen 257 T-----EQG-------TPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTN 324 (464)
T ss_pred c-----ccC-------ccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCc
Confidence 0 111 2355667888887766555555554444433321 11111 12566777778888999999
Q ss_pred hhhhhccc
Q 012075 291 GIGYIFDF 298 (471)
Q Consensus 291 ~~g~l~D~ 298 (471)
+.|.+.||
T Consensus 325 lfg~la~k 332 (464)
T KOG3764|consen 325 LFGKLADK 332 (464)
T ss_pred hHHHHHHh
Confidence 99999998
No 80
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.66 E-value=1.6e-14 Score=147.47 Aligned_cols=318 Identities=15% Similarity=0.050 Sum_probs=153.5
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchH-HHHHHHHHHhhhhhHHHh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQA-FAIAAGAILGIGAGLLWA 133 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~-~li~~r~l~G~g~g~~~~ 133 (471)
.++...+...+.......++++++|+++||+|||+.++++..+..+..........++... ....+.++.++..+..+.
T Consensus 43 ~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (420)
T PRK09528 43 LSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFL 122 (420)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 3455667778888888899999999999999999999887665443222111101011000 111222333333332222
Q ss_pred hhhhhhccCCC--CCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCcc
Q 012075 134 AEGAIMTSYPP--PNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRV 211 (471)
Q Consensus 134 ~~~~~i~~~~~--~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~ 211 (471)
.....+.++.+ +++||+.+|......++|..+|+.+...+. .. +|++ .++...++.++..++.++.++|++.
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~-~~----~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~ 196 (420)
T PRK09528 123 AGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILF-NI----NPQI-NFWLGSGSALILLVLLFFAKPDAPS 196 (420)
T ss_pred cchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHH-hc----CchH-hHHHHHHHHHHHHHHHhcccccccc
Confidence 21112222222 356777888888888899999998864332 21 2333 2333333333333333344433221
Q ss_pred ccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHhHh---hhcccccccc-----ccccchhhhHHHHHHH
Q 012075 212 IRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNFFY---SYQFNNVNGL-----QFNLRTRGLNNVFYWG 283 (471)
Q Consensus 212 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~---s~~~~~~~~~-----~~~~~~~~l~~~~~~i 283 (471)
+++++++...+++ +.+.++..+.+++|+++.+..........+ ...++.+... ..+....+.......+
T Consensus 197 ~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 273 (420)
T PRK09528 197 TAKVANALGANAS---AVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVF 273 (420)
T ss_pred hhhhccchhcccc---cccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHH
Confidence 1100000000011 112233444556665433222211111111 1111222111 1222233455555677
Q ss_pred HHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhh
Q 012075 284 AQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLL 363 (471)
Q Consensus 284 ~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 363 (471)
+..++.++.|++.|| +|||+....+.... .+.... +. +. .+.....+..++.+..
T Consensus 274 ~~~~~~~~~g~l~dr--~g~~~~~~~~~~l~-~~~~~l----~~----~~--------------~~~~~~~~~~~l~g~~ 328 (420)
T PRK09528 274 LEALIMFFAPFIINR--IGAKNALLLAGTIM-AVRIIG----SG----FA--------------TGPLEVSILKLLHAFE 328 (420)
T ss_pred HHHHHHHHHHHHHHH--hCcchhhHHHHHHH-HHHHHH----HH----hc--------------ccHHHHHHHHHHHHHH
Confidence 888999999999999 88988655443322 111111 11 01 1112234445566666
Q ss_pred HHHHHHHHHHHHHHhcCCchhhhHHHHH-HHHHHHHHHHHHhhhc
Q 012075 364 DAMFQSMVYWVIGALADDSETLSRYSGF-YKGVQSAGAAVAWQVD 407 (471)
Q Consensus 364 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~s~g~~i~~~~~ 407 (471)
.+...+....++.+.++ ++.+++..+. +++...+|.+++..+.
T Consensus 329 ~~~~~~~~~~~~~~~~~-~~~~a~~~~~~~~~~~~lg~~ig~~~~ 372 (420)
T PRK09528 329 VPFLLVGVFKYITLNFD-VRLSATIYLVGFQFAKQLGAVFLSTLA 372 (420)
T ss_pred HHHHHHHHHHHHHHHcC-ccceeeeeeehHHHHHHHHHHHHHHHH
Confidence 66655555566777773 3333444433 4554556666655543
No 81
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.66 E-value=4e-14 Score=144.29 Aligned_cols=342 Identities=12% Similarity=0.051 Sum_probs=183.6
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccch-hHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGP-QVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWA 133 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Gr-k~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~ 133 (471)
.++...++..+....+..++++++|.++||+|| |+.+.++.++..+.... . ...++.+.+++.|++.|++.+...+
T Consensus 35 ~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~l~~~~~~~~~~ 111 (418)
T TIGR00889 35 FSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFF--A-AQVTTPAGMFPVLLANSLAYMPTIA 111 (418)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH--H-HHhcCHHHHHHHHHHHHHHHccHHH
Confidence 345566777888888889999999999999965 77888777665442222 1 2357788899999999998766544
Q ss_pred hhhhh----hc----cCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhc
Q 012075 134 AEGAI----MT----SYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVI 205 (471)
Q Consensus 134 ~~~~~----i~----~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l 205 (471)
...+. .. |+.....|.|..|. +|..+|+++...+.. ...|..+.+..++..+..++.++
T Consensus 112 ~~~~l~~~~~~~~g~~~~~~~~~~r~~G~------lG~~ig~~l~g~l~~------~~~~~~f~~~~~~~~~~~~~~~~- 178 (418)
T TIGR00889 112 LTNSISYANLPQAGLDVVTDFPPIRVMGT------IGFIAAMWAVSLLDI------ELSNIQLYITAGSSALLGVFALT- 178 (418)
T ss_pred HHHHHHHHHHhhcCCCchhcCCCeeeehh------HHHHHHHHHHHHhcc------cchhHHHHHHHHHHHHHHHHHhc-
Confidence 33322 22 34444567777773 466777776532211 11122233333333333333223
Q ss_pred cCCCccccCCCCccccccCCCHHHHH-HHHHHHhcchhHHHHHHHHHHhHh----Hhhhccccccc-ccc--------cc
Q 012075 206 LPPGRVIRDDGTHCTNIKYSNVSTEI-TQVLKLFSNWKMLLIFPASWASNF----FYSYQFNNVNG-LQF--------NL 271 (471)
Q Consensus 206 ~~p~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~~~~~~~~----~~s~~~~~~~~-~~~--------~~ 271 (471)
.|+++ ++++++ +.+.++.. .+..+.+++|+++.+....+..+. .+.+. +.+.. .+. ..
T Consensus 179 ~~e~~-~~~~~~------~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~ 250 (418)
T TIGR00889 179 LPDIP-VAKSTA------KMSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFG-NGFLHEFGRNPEFADSFVV 250 (418)
T ss_pred CCCCC-CCcccc------ccCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhH-HHHHHHhcccccccchhhh
Confidence 33221 111110 11111111 111234566665433333222211 11111 22211 111 12
Q ss_pred chhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCch
Q 012075 272 RTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFA 351 (471)
Q Consensus 272 ~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (471)
...+.......+..+++.+..+++.|| +|||+....+.+... +...... +.+. .+ ..+.
T Consensus 251 ~~~g~~~~~~~i~~i~~~~~~g~l~dr--~g~r~~l~~~~~~~~-v~~~l~~--------~~~~------~~----~~~~ 309 (418)
T TIGR00889 251 KNASIWMSLSQFSEIFFILTIPFFLKR--FGIKKVMLLSLVAWA-LRFGFFA--------YGDP------EY----FGYA 309 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHH-HHHHHHH--------HcCc------ch----hhHH
Confidence 334566666788888899999999999 799997766654331 1111111 0000 00 1122
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHH-HHHHHHHHHHhhhcccCchhhH-----HHHHHHHHHH
Q 012075 352 GPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYK-GVQSAGAAVAWQVDTHKVSLLS-----QLVVNWSLTT 425 (471)
Q Consensus 352 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~s~g~~i~~~~~~~~~p~~~-----~~~~~~~~~~ 425 (471)
..++..++.+++.+...+....++.+.++ +++++++.|+.+ ...++|.+++..+......... .....|.+.+
T Consensus 310 ~l~l~~~l~g~~~~~~~~~~~~~i~~~~p-~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 310 LLFLSMIVYGCAFDFFNISGSVFVEKEVP-VHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHH
Confidence 33455666777777777776777888884 456699999997 4567888887776643322111 0112333343
Q ss_pred hhhhhhhheeeeeeccC
Q 012075 426 ISYPLLVILVLLAVKDE 442 (471)
Q Consensus 426 ~~~~~~i~~~~~~~pet 442 (471)
+..+...+..++++||+
T Consensus 389 ~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 389 GYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 33334445566777877
No 82
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.65 E-value=1.2e-13 Score=139.78 Aligned_cols=304 Identities=14% Similarity=0.079 Sum_probs=148.3
Q ss_pred hhhhhHHHHHH-HHHHHhhhchhhhhhhccchhHHHHHHH-HHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 57 TTAANNANTAL-YTTFTIFGILGGGIYNILGPQVTLISAC-STYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 57 ~~~~~~~~~~~-~~~~~i~~~~~g~l~d~~Grk~~l~i~~-~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
+...+...+.. .....++++.+++ .||+|||+.+++.. +...+ +... .+.+++.+.+++.+.+.|...+...+.
T Consensus 50 ~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~--~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~ 125 (393)
T PRK15011 50 PAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVL--ACTL-FAWNRNYFVLLFVGVFLSSFGSTANPQ 125 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHH--HHHH-HHHhhHHHHHHHHHHHHHHHHHhhHHH
Confidence 44334443333 3344455666666 99999998765544 33222 1111 133577887665555444444455666
Q ss_pred hhhhhccCCCCCch--hhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccc
Q 012075 135 EGAIMTSYPPPNRK--GTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVI 212 (471)
Q Consensus 135 ~~~~i~~~~~~~~R--G~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~ 212 (471)
...+..|..++++| +...++.....++|.++||.++..+... .+|+. .|+...++.++..+...+..|+++.+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~----~gw~~-~f~~~~~~~~~~~~~~~~~~~~~~~~ 200 (393)
T PRK15011 126 MFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMG----FSFTV-MYLSAAVAFIVCGVMVWLFLPSMRKE 200 (393)
T ss_pred HHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHh----cChHH-HHHHHHHHHHHHHHHHHhhcCccCCC
Confidence 77777776665555 4556788888899999999997444322 13443 23333333333333333333432211
Q ss_pred cCCCCccccccCCCHHHHHHHHHHHhcchhHHHH--HHHHHHhHh-Hhhhcccccccc--ccccchhhhHHHHHHHHHHH
Q 012075 213 RDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLI--FPASWASNF-FYSYQFNNVNGL--QFNLRTRGLNNVFYWGAQML 287 (471)
Q Consensus 213 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~~~~~~~~-~~s~~~~~~~~~--~~~~~~~~l~~~~~~i~~i~ 287 (471)
++++++ +.+ ..+ + .++..+.. .....+... .+....+.+... +++....++......++.++
T Consensus 201 ~~~~~~----~~~----~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~ 267 (393)
T PRK15011 201 LPLATG----TLE----APR---R--NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIP 267 (393)
T ss_pred Cccccc----ccc----ccc---c--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 111000 000 001 0 11111111 111111111 111112333322 22333445544455667788
Q ss_pred HhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHH
Q 012075 288 GSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMF 367 (471)
Q Consensus 288 g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 367 (471)
+.++.|++.|| +|||+....+.... .+. .. .... . + +.....+..++.++..+..
T Consensus 268 ~~~~~G~l~dr--~g~~~~~~~~~~~~-~~~---~~-~~~~----~--------~------~~~~~l~~~~l~~~~~g~~ 322 (393)
T PRK15011 268 TMLIAGYFAKR--LGKRFLMRVAAVAG-VCF---YA-GMLM----A--------H------SPAILLGLQLLNAIYIGIL 322 (393)
T ss_pred HHHHHHHHHHH--hChHHHHHHHHHHH-HHH---HH-HHHH----H--------h------hHHHHHHHHHHHHHHHHHH
Confidence 88999999999 78887554433222 111 11 0100 0 0 1111122222233333333
Q ss_pred HHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhccc
Q 012075 368 QSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTH 409 (471)
Q Consensus 368 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~ 409 (471)
.+....+..|++++ +++++.++++...++|.+++-.+...
T Consensus 323 ~~~~~~~~~~~~p~--~~g~~~~~~~~~~~lg~~~g~~l~G~ 362 (393)
T PRK15011 323 GGIGMLYFQDLMPG--QAGSATTLYTNTSRVGWIIAGSLAGI 362 (393)
T ss_pred HHHHHHHHHHhCCC--CcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344556777743 35788898888888888888776653
No 83
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.65 E-value=2.1e-14 Score=137.31 Aligned_cols=110 Identities=19% Similarity=0.121 Sum_probs=89.2
Q ss_pred hhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhh
Q 012075 60 ANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIM 139 (471)
Q Consensus 60 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i 139 (471)
++..-+.+...-.+.+..+|.++|++|||+++.++.+.-.++.... +.+.|...++.+|++.|+..|-..+ .-+|+
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~---~~S~~F~afv~aR~l~Gi~kgnl~v-~rAii 145 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLW---ALSRNFAAFVLARFLGGIFKGNLSV-IRAII 145 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhhhccCchHH-HHHHH
Confidence 3444445556677788999999999999999999998766543322 3367787778889999999997654 57899
Q ss_pred ccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 140 TSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 140 ~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
+|+.++|+|++.++.....+.+|.++||.|+..+
T Consensus 146 sdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyl 179 (451)
T KOG2615|consen 146 SDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYL 179 (451)
T ss_pred HhhcChhhccceeeeeehhhhcchhhcchhhhHH
Confidence 9999999999999999999999999999998433
No 84
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.65 E-value=3.6e-15 Score=158.94 Aligned_cols=115 Identities=15% Similarity=0.107 Sum_probs=92.6
Q ss_pred hhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhc----------------------------
Q 012075 59 AANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNH---------------------------- 110 (471)
Q Consensus 59 ~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~---------------------------- 110 (471)
..+...+....+.+++.++.+++.||+|||+.+.++.+++.+....+....+
T Consensus 69 ~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~ 148 (633)
T TIGR00805 69 SSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMEN 148 (633)
T ss_pred cceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCC
Confidence 3344556677778888999999999999999999999887764433222100
Q ss_pred --------------------ccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 111 --------------------HKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 111 --------------------~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
...+..++++|+++|+|.+..++...+|++|+.|+++|++++++++....+|+.+|++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llg 228 (633)
T TIGR00805 149 LTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLG 228 (633)
T ss_pred CCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHH
Confidence 001346789999999999999999999999999999999999999999999999999987
Q ss_pred HHh
Q 012075 171 FIL 173 (471)
Q Consensus 171 ~~~ 173 (471)
..+
T Consensus 229 g~l 231 (633)
T TIGR00805 229 SFC 231 (633)
T ss_pred HHH
Confidence 433
No 85
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.63 E-value=6.3e-14 Score=143.57 Aligned_cols=320 Identities=12% Similarity=0.031 Sum_probs=175.1
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhc----cchhH-HHHHHHHHHHHHHHHHHhhh-cc--cchHHHHHHHHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNI----LGPQV-TLISACSTYVLYAGSFLYYN-HH--KHQAFAIAAGAILGIG 127 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~Grk~-~l~i~~~~~~~~~~~~~~~~-~~--~~~~~li~~r~l~G~g 127 (471)
++...+...++.....++..++.|+++|| +|||+ .++++.+.+.+......... .. .....+++.+++.+++
T Consensus 33 s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (437)
T TIGR00792 33 SAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLF 112 (437)
T ss_pred CHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHH
Confidence 45555666667777788899999999997 78744 56666666554333222210 00 1135667788898988
Q ss_pred hhHHHhhhhhhhccCC-CCCchhhHHHHHHHHHHhhhhhhhHHHHHhhc-cC--CCccccccchhHHHHHHHHHHHHHHH
Q 012075 128 AGLLWAAEGAIMTSYP-PPNRKGTYISIFWSIFNMGGVIGGLIPFILNY-NR--NEAVSVNDGTYIGFMCFMSAGALLSL 203 (471)
Q Consensus 128 ~g~~~~~~~~~i~~~~-~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~i~~~ 203 (471)
.+...+...++..|.. ++++|++..++.+....+|..+++.+...+.. .. .+..+|++. +.+..++..+..++..
T Consensus 113 ~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~-~~i~~~l~~~~~~~~~ 191 (437)
T TIGR00792 113 YSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMF-ALVLALIGVVSLIICF 191 (437)
T ss_pred HHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHH-HHHHHHHHHHHHHHHH
Confidence 8887666677778876 57899999999888888887776655322211 11 001122221 2222222222222222
Q ss_pred hccCCCccccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHhHhh---hccccccccccc-cchhhhHHH
Q 012075 204 VILPPGRVIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNFFYS---YQFNNVNGLQFN-LRTRGLNNV 279 (471)
Q Consensus 204 ~l~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~s---~~~~~~~~~~~~-~~~~~l~~~ 279 (471)
+..|+++.+++++ ++++.+.++.+++ .+++|+++......+.....+. ...+.+..+.++ ....+....
T Consensus 192 ~~~~e~~~~~~~~----~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (437)
T TIGR00792 192 FGTKERYSEIPKN----IEKKLSLKQIFKA---LFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGS 264 (437)
T ss_pred cCCEecCCCCCcc----cccCCCHHHHHHH---HhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHH
Confidence 2223221100110 0112234443332 3455655444333222222111 111112222222 222344445
Q ss_pred HHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHH
Q 012075 280 FYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFC 359 (471)
Q Consensus 280 ~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (471)
...++.+++.++.+++.|| +|||+....+..++. +..... . . . + .+.....+..++
T Consensus 265 ~~~i~~ii~~~~~~~l~~r--~g~~~~~~~~~~~~~-~~~~~~----~-~---~--------~-----~~~~~~~~~~~~ 320 (437)
T TIGR00792 265 IAIVAGLIGVLLFPRLVKK--FGRKILFAGGILLMV-LGYLIF----F-F---A--------G-----SNLPLILVLIIL 320 (437)
T ss_pred HHHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHH-HHHHHH----H-H---c--------c-----hhHHHHHHHHHH
Confidence 5688899999999999999 789887766644331 111111 1 0 0 0 011223445556
Q ss_pred HHhhHHHHHHHHHHHHHHhcC------CchhhhHHHHHHHHHHHHHHHHHhhhc
Q 012075 360 YGLLDAMFQSMVYWVIGALAD------DSETLSRYSGFYKGVQSAGAAVAWQVD 407 (471)
Q Consensus 360 ~g~~~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~~~s~g~~i~~~~~ 407 (471)
.+++.+..++..+.++++..+ +.|+.+.++|++++.+.++.+++-.+.
T Consensus 321 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~ 374 (437)
T TIGR00792 321 AGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLV 374 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 677777777777777776641 245568889999999888888776544
No 86
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.62 E-value=5.7e-14 Score=136.80 Aligned_cols=306 Identities=13% Similarity=0.086 Sum_probs=169.6
Q ss_pred CCCCCChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhH
Q 012075 51 GGGQVDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGL 130 (471)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~ 130 (471)
.+...++.+..+..++-.+..++..+.-|++.||+|.|+...++.++..+=..........+++|++++.+++.|++.+.
T Consensus 42 ~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~Gas 121 (417)
T COG2223 42 SDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGAS 121 (417)
T ss_pred cccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccce
Confidence 33344556666667777777788889999999999999999999887554222222211235567999999999999997
Q ss_pred HHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCc
Q 012075 131 LWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGR 210 (471)
Q Consensus 131 ~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~ 210 (471)
..+ ...+++++.|||++|.++|++. .-|+|..+...+.-.+..... .+.|+. ...+.....++..+...+.....+
T Consensus 122 Fav-~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g-~~~w~~-~~~i~~~~l~v~~v~~~~~~~d~p 197 (417)
T COG2223 122 FAV-GMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFG-FLAWRN-VAGIYVVALAIAAVLAWLGMNDVP 197 (417)
T ss_pred ehc-ccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHh-hHHHHH-HHHHHHHHHHHHHHHHHHHhCCCh
Confidence 654 5667889999999999999998 666665444433211111000 001222 223333344444444444333111
Q ss_pred cccCCCCccccccCCCHH-HHHHHHHHHhcchhHHHHHHHHHHh--H-hHhhhcccccccccccc--chhhhHHHHHHHH
Q 012075 211 VIRDDGTHCTNIKYSNVS-TEITQVLKLFSNWKMLLIFPASWAS--N-FFYSYQFNNVNGLQFNL--RTRGLNNVFYWGA 284 (471)
Q Consensus 211 ~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~~~~~~--~-~~~s~~~~~~~~~~~~~--~~~~l~~~~~~i~ 284 (471)
..|.+ .++.+ .+++ ...++|+.+.+....+.+ + .-++..++.+...+|+. .+.+.........
T Consensus 198 ~~r~~--------~~~~~~~~~~---~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~ 266 (417)
T COG2223 198 EHRAS--------VKPQLPAQLK---AVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLI 266 (417)
T ss_pred hhhcc--------ccccchhHHH---HHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHH
Confidence 11111 11111 2222 234566666655443322 1 12333335554434433 3445555566677
Q ss_pred HHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhH
Q 012075 285 QMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLD 364 (471)
Q Consensus 285 ~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 364 (471)
..+..+++|+++|| +|.++..+....++.++..+.. + ..+ ..... +........++..+++.
T Consensus 267 g~l~Rp~GG~LsDR--~Gg~rv~~~~f~~~~~~~~~l~---~------~~~------~~~~~-~~~~~~~~~~l~l~~~~ 328 (417)
T COG2223 267 GALARPLGGWLSDR--IGGRRVTLAVFVGMALAAALLS---L------FLT------GFGHG-GSFVVFVAVFLALFVFA 328 (417)
T ss_pred HHHHHhccchhhhh--ccchhHHHHHHHHHHHHHHHHH---c------ccc------ccccC-cchHHHHHHHHHHHHHh
Confidence 77888999999999 6666666555554432222211 1 100 00000 22222344455555666
Q ss_pred HHHHHHHHHHHHHhcCCchhhhHHHHH
Q 012075 365 AMFQSMVYWVIGALADDSETLSRYSGF 391 (471)
Q Consensus 365 ~~~~~~~~~~i~~~~~~~~~~~~~~~~ 391 (471)
+..+..++-.++.+++ ++.+...|+
T Consensus 329 G~GnGsvfk~Ip~if~--~~~G~v~G~ 353 (417)
T COG2223 329 GLGNGSVFKMIPVIFP--KETGAVTGI 353 (417)
T ss_pred ccCcchheeechHHHH--hhhhHHHHH
Confidence 6666677888888883 233444443
No 87
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=99.61 E-value=2.1e-15 Score=140.78 Aligned_cols=331 Identities=18% Similarity=0.257 Sum_probs=212.7
Q ss_pred CCcccccccccccccccccchhHHHHHHHHHHhhhhhhhHhhhhcCCCCCCChhhhhHHHHHHHHHHHhhhchhhhhhhc
Q 012075 5 GESAGKQQMVVGKSRFRYNSPLVQVCLIGLVCFCCPGMFNALSGMGGGGQVDTTAANNANTALYTTFTIFGILGGGIYNI 84 (471)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~ 84 (471)
++||++++.+.+++. ....|+.+++..+++.+.+|..+++++.+-+. +++..+++.+|.....++++.+.+.++
T Consensus 11 ~~s~~~~~~~~r~~~----~~~knv~i~s~~fl~~f~a~~gl~nlq~~vn~--~lg~~sl~~~y~~l~~s~m~~~~~Ir~ 84 (390)
T KOG3097|consen 11 NESEEEERRYRRKRL----GILKNVLILSIAFLLTFTAYLGLQNLQTSVNY--DLGTVSLGALYLSLIDSSMFMPLLIRF 84 (390)
T ss_pred CCCCcccchhccccc----chhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc--CcccchhhhhhHHHHHHHHHHHHHHHH
Confidence 345555544443322 33446888999988888889999999876332 456677888899889999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCC--CCch---------hhHHH
Q 012075 85 LGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPP--PNRK---------GTYIS 153 (471)
Q Consensus 85 ~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~--~~~R---------G~~~g 153 (471)
+|.|++++++...|.+|++.... +.+..++.+....|+|.+..|.+.++|++++.+ .++| .+..|
T Consensus 85 ~g~K~tm~lav~~Y~lyiA~Nl~----pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~~~~~~ffg 160 (390)
T KOG3097|consen 85 LGTKWTMVLAVFPYALYIAANLE----PRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGDGMKVRFFG 160 (390)
T ss_pred HhhHHHHHHHHHHHHHHHHhhcc----hhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhhhccCceeeeehh
Confidence 99999999999999998876654 678899999999999999999999999998875 3456 58889
Q ss_pred HHHHHHHhhhhhhhHHHHHh---hccC---C--C----c-------------cc-cccchh------HHHHHHHHHHHHH
Q 012075 154 IFWSIFNMGGVIGGLIPFIL---NYNR---N--E----A-------------VS-VNDGTY------IGFMCFMSAGALL 201 (471)
Q Consensus 154 ~~~~~~~~G~~iG~~i~~~~---~~~~---~--~----~-------------~~-~~~~~~------~~~~~~~~~~~i~ 201 (471)
.|+.+++....+|+.++..+ ..+. + + . +. .+...+ .++.....+..++
T Consensus 161 ~Ffii~~~~qv~gn~issli~~~~~~~~~~~sn~t~~~~CG~~f~~~g~~a~~nlt~p~~~~~lvls~i~L~c~via~~~ 240 (390)
T KOG3097|consen 161 EFFIIFQCAQVWGNLISSLIMTLFLHGALSGSNLTFSVECGANFCGSGDKAEGNLTLPPSYVILVLSLIFLPCMVIAVLI 240 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCccceeeeecccccCCccccccCCccCCCCCceEEeeHHHHHHHHHHHHH
Confidence 99999999999987775321 1111 0 0 0 00 000000 1111111222222
Q ss_pred HHhccCCCccccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHhHhhhccccc----cccccccchhhhH
Q 012075 202 SLVILPPGRVIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNFFYSYQFNNV----NGLQFNLRTRGLN 277 (471)
Q Consensus 202 ~~~l~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~s~~~~~~----~~~~~~~~~~~l~ 277 (471)
+.++..+ ..|..++. -+..+..+.+.-.++.++++|+.+++|+..+.++-..+.-..+ .....+....+..
T Consensus 241 ~~~~~~~--l~r~~~~r---~~~~~~l~i~~l~~~~l~~~r~~llvP~tif~GleqaF~~~~fTk~~V~c~~Gv~~igf~ 315 (390)
T KOG3097|consen 241 MLFFLGA--LKRYGEKR---LASVSGLNIFQLTFKHLRDIRLRLLVPLTIFSGLEQAFLCADFTKAYVACALGVSRIGFA 315 (390)
T ss_pred HHHHHHH--Hhhhhhhh---hhcccccchHHHHHHHhcCcceeeeehhhhhhHHHHHHHHhhhhhhhhhhhhhHHHHHHH
Confidence 2222211 00100000 0111222334556778899999999999998886444331111 1122344556788
Q ss_pred HHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHH
Q 012075 278 NVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLY 357 (471)
Q Consensus 278 ~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (471)
+.+++++..+.+.+.|.+..+ +||-+....+.+++..+.... + .++.+ | + +++ ...+..
T Consensus 316 m~cfgv~~Av~S~~~g~L~~~--~gr~~~~v~gavv~l~li~~~----~----~w~~~--~------~--~~~-i~y~~a 374 (390)
T KOG3097|consen 316 MACFGVGDAVASSLFGLLGKW--IGRPPLLVLGAVVHLLLITIL----F----FWAPN--P------Q--DSW-IFYVAA 374 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhh--cCCccHHHHHHHHHHHHHHHH----H----hcccC--C------C--Cce-EEEeeh
Confidence 899999988888888999987 899988877777663222111 1 12211 0 1 122 234556
Q ss_pred HHHHhhHHHHHHHH
Q 012075 358 FCYGLLDAMFQSMV 371 (471)
Q Consensus 358 ~~~g~~~~~~~~~~ 371 (471)
.+||.+|+.|++++
T Consensus 375 alwgv~d~vw~t~i 388 (390)
T KOG3097|consen 375 ALWGVGDAVWKTQI 388 (390)
T ss_pred hhcCccHHHHHhhc
Confidence 67999999999875
No 88
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.60 E-value=6.3e-13 Score=134.53 Aligned_cols=315 Identities=12% Similarity=0.003 Sum_probs=162.7
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcc-----cchHHHHHHHHHHhhhhhH
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHH-----KHQAFAIAAGAILGIGAGL 130 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~-----~~~~~li~~r~l~G~g~g~ 130 (471)
++...+...+.......+++++.|+++||+|||+.++.+.+.+.+........... .....+++.|++.|++.+.
T Consensus 36 s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 115 (396)
T TIGR00882 36 SKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSA 115 (396)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 45555667777888888999999999999999999998876554322221111111 1233456778888988888
Q ss_pred HHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCc
Q 012075 131 LWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGR 210 (471)
Q Consensus 131 ~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~ 210 (471)
..+....+..|.. +++++..|......++|..+|+.++. .... .+|+.. ++....+..+..++.++..|+.+
T Consensus 116 ~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g-~l~~----~~~~~~-f~~~~~~~~~~~~~~~~~~~~~~ 187 (396)
T TIGR00882 116 GAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAG-ILFS----IDPQIV-FWLGSGFALILMLLLMFAKPKAP 187 (396)
T ss_pred chhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHh-hhhc----cCchHH-HHHHHHHHHHHHHHHHHhCCCCc
Confidence 7777777776653 33455667777777889999998863 3322 123332 33333333333333333333221
Q ss_pred cccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHhH---hhhcccccccc-----ccccchhhhHHHHHH
Q 012075 211 VIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNFF---YSYQFNNVNGL-----QFNLRTRGLNNVFYW 282 (471)
Q Consensus 211 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~---~s~~~~~~~~~-----~~~~~~~~l~~~~~~ 282 (471)
.+++++++.+.++++ ++.++..+.+++|+++......+..... ....++.+... +.+....+.......
T Consensus 188 ~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~ 264 (396)
T TIGR00882 188 SSATVANALGANASA---FSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGE 264 (396)
T ss_pred hhhhhhcccccccCC---CCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHH
Confidence 111000000000011 1123344456666654433332221111 11111222211 112223344555567
Q ss_pred HHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHh
Q 012075 283 GAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGL 362 (471)
Q Consensus 283 i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 362 (471)
+...++....+++.|| +|||+...++..++. +.... +.. . .+........++.++
T Consensus 265 i~~~~~~~~~g~l~~r--~g~~~~l~~~~~l~~-l~~~~----~~~----~--------------~~~~~~~~~~~l~g~ 319 (396)
T TIGR00882 265 LLNALIMFCAPLIINR--IGAKNALLIAGTIMS-VRIIG----SSF----A--------------TTALEVVILKMLHAF 319 (396)
T ss_pred HHHHHHHHHHHHHHHH--hccchhHHHHHHHHH-HHHHH----HHh----c--------------CChHHHHHHHHHHHH
Confidence 7788888888999999 889987655544331 11111 110 0 111123444555666
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhHHHHH-HHHHHHHHHHHHhhhc
Q 012075 363 LDAMFQSMVYWVIGALADDSETLSRYSGF-YKGVQSAGAAVAWQVD 407 (471)
Q Consensus 363 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~s~g~~i~~~~~ 407 (471)
+....+.....+..+..+ .|..+++.+. +++...+|..+...+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~-~~~~at~~~~~~~~~~~lg~~~~~~l~ 364 (396)
T TIGR00882 320 EVPFLLVGCFKYITSQFD-VRLSATIYLIGFQFAKQLAMIFLSTLA 364 (396)
T ss_pred HHHHHHHHHHHHHHHhCC-cceEEEeehHHHHHHHHHHHHHHHHhH
Confidence 655444434434455552 3333444444 5566677777776544
No 89
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.60 E-value=9.9e-13 Score=132.49 Aligned_cols=305 Identities=12% Similarity=0.004 Sum_probs=177.3
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHH----HHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHH
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVT----LISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLL 131 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~----l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~ 131 (471)
+....+...+.......++++++++++||+|||.. +.++..++.+ . ....+++.+.+++.|++.|.+.+..
T Consensus 37 s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~---~--~~~~~~~~~~l~~~~~l~~~~~~~~ 111 (382)
T TIGR00902 37 GEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA---A--FSAGAHNAWLLFIAIGLFALFFSAG 111 (382)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH---H--HHHhhhhHHHHHHHHHHHHHHHccc
Confidence 45666777777788888899999999999998443 3333322221 1 1123578999999999999888887
Q ss_pred HhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCcc
Q 012075 132 WAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRV 211 (471)
Q Consensus 132 ~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~ 211 (471)
.+...++..+. +++|++..|......++|.++||.+...+... .+|++..+. ...+.. ..++.+.+ +|+..
T Consensus 112 ~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~----~g~~~~f~~-~~~~~~-~~~~~~~~-~~~~~ 182 (382)
T TIGR00902 112 MPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGM----FDEQNILAI-LTAGLA-FMLIGFLI-KPTIP 182 (382)
T ss_pred hhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHH----cChhHHHHH-HHHHHH-HHHHHHHc-CCCCC
Confidence 77777776653 57899999999999999999999986444321 235443332 222211 12222222 32211
Q ss_pred ccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHh----Hhhhccccccc-cccccchhhhHHHHHHHHHH
Q 012075 212 IRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNF----FYSYQFNNVNG-LQFNLRTRGLNNVFYWGAQM 286 (471)
Q Consensus 212 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~----~~s~~~~~~~~-~~~~~~~~~l~~~~~~i~~i 286 (471)
+++++++ +++++ .++..+.+++|+++......+.... ++++. +.+.. .+.+....++......++++
T Consensus 183 ~~~~~~~---~~~~~----~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~-~~~l~~~g~s~~~~g~l~~~~~~~~i 254 (382)
T TIGR00902 183 PKDAIPE---DESQG----DSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFS-AIYWQAAGISASATGLLWGIGVLAEI 254 (382)
T ss_pred CCccccc---ccccc----chhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCCHhHHHHHHHHHHHHHH
Confidence 1111100 00111 1223345677776554443332211 22222 33322 23344455666666788888
Q ss_pred HHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHH
Q 012075 287 LGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAM 366 (471)
Q Consensus 287 ~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 366 (471)
++..+.+++.|| +|+|+.+.++.+... +.... +. +. ++........++.++..+.
T Consensus 255 ~~~~~~~~l~~r--~g~~~~l~~~~~~~~-~~~~~----~~----~~--------------~~~~~~~~~q~l~g~~~~~ 309 (382)
T TIGR00902 255 IIFAFSNKLFQN--CSARDLLLISAIACV-GRWAI----IG----AI--------------EAFPLIFLLQILHCGTFAV 309 (382)
T ss_pred HHHHHhHHHHhh--CCHHHHHHHHHHHHH-HHHHH----HH----hH--------------hhHHHHHHHHHHHHHHHHH
Confidence 888889999998 788886655544331 11111 11 01 2223456667888888888
Q ss_pred HHHHHHHHHHHhcCCchhhhHHHHHHHHH-HHHHHHHHhhhccc
Q 012075 367 FQSMVYWVIGALADDSETLSRYSGFYKGV-QSAGAAVAWQVDTH 409 (471)
Q Consensus 367 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~s~g~~i~~~~~~~ 409 (471)
..+....++.+. + +++++++.++++.. ..+|.+++..++..
T Consensus 310 ~~~~~~~~i~~~-~-~~~~~~~q~~~~~~~~g~g~~~g~~~~G~ 351 (382)
T TIGR00902 310 CHLAAMRYIAAQ-P-GSEIAKLQALYNALAMGGLIAIFTAFAGF 351 (382)
T ss_pred HHHHHHHHHHhC-C-HhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887777677765 3 34557777877643 35666666655543
No 90
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.58 E-value=1.5e-13 Score=141.97 Aligned_cols=317 Identities=16% Similarity=0.127 Sum_probs=191.9
Q ss_pred hhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHH-HHHHHHHhhhhhHHHhhhhhh
Q 012075 60 ANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFA-IAAGAILGIGAGLLWAAEGAI 138 (471)
Q Consensus 60 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~l-i~~r~l~G~g~g~~~~~~~~~ 138 (471)
..+..++...+..+.+++++.+.||+|.|.+.+.|.++..+ ++....++++.|++ +...++.|+|.|+.+..+.++
T Consensus 83 ~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~---g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paivi 159 (509)
T KOG2504|consen 83 IAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAAL---GLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVI 159 (509)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHH---HHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhh
Confidence 45566666777777889999999999999999999997765 33333446888865 557899999999999888888
Q ss_pred hccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccc------
Q 012075 139 MTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVI------ 212 (471)
Q Consensus 139 i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~------ 212 (471)
+..+ .+++|+.++|+-.+...+|.++=|.+.-.+... -+|++... ++..+..-..+.....+|..+..
T Consensus 160 v~~Y-F~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~----~G~r~~~l-~~~~~~l~~~~~~~~~rp~~~~~~~~~~~ 233 (509)
T KOG2504|consen 160 LGTY-FEKKRALATGIAVSGTGVGTVVFPPLLKYLLSK----YGWRGALL-IFGGISLNVLVAGALLRPLSPPKKPNEEK 233 (509)
T ss_pred hhhH-hHHHHHHHHhhhhccCCcceeeHHHHHHHHHHH----hCcHHHHH-HHHHHHHHHHHHHHHcCCCCcCCCchhhh
Confidence 8866 688999999999888888776655554222221 24555443 33333343444555666611110
Q ss_pred -----------------cCCCCcc---c----------cccCCCHH---HHHHHH---HHHhcchhHHHHHHHHHHh--H
Q 012075 213 -----------------RDDGTHC---T----------NIKYSNVS---TEITQV---LKLFSNWKMLLIFPASWAS--N 254 (471)
Q Consensus 213 -----------------r~~~~~~---~----------~~~~~~~~---~~~~~~---~~~~~~~~~ll~~~~~~~~--~ 254 (471)
++.+.+. . ...++..+ ++.... ++.+++|.++++..-..+. +
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g 313 (509)
T KOG2504|consen 234 DLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLG 313 (509)
T ss_pred hhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHH
Confidence 0000000 0 00000010 000111 3455666555444322222 2
Q ss_pred hHhh-hcccccc-ccccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhccc
Q 012075 255 FFYS-YQFNNVN-GLQFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNY 332 (471)
Q Consensus 255 ~~~s-~~~~~~~-~~~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 332 (471)
+... ..++.+. ..+++....+....+.++..+++.++.|.+.|+.++.++....++.+++ ++.... .
T Consensus 314 ~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~---gl~~~~-----~--- 382 (509)
T KOG2504|consen 314 FNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIA---GLARLF-----L--- 382 (509)
T ss_pred HHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHH---HHHHHH-----H---
Confidence 2111 1112222 2334444566667778999999999999999985322333222222222 111100 0
Q ss_pred CCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhccc
Q 012075 333 SHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTH 409 (471)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~ 409 (471)
+ . . ..+.......+++|++.+.+......++.++. +.++...++|+...+++++..++--+...
T Consensus 383 p---------~-~--~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~-g~~~l~~a~Gl~l~~~gi~~l~gpPiag~ 446 (509)
T KOG2504|consen 383 P---------F-A--TTYVGLIVFSILFGFCVGSFSSLTPVILVDLV-GLEKLSNAYGLLLLFQGIGALVGPPIAGL 446 (509)
T ss_pred H---------H-h--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ChhhcchHHHHHHHHhHHHHHcCccccee
Confidence 0 0 1 24455778888999999999988887888888 35567899999999998888877666543
No 91
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.58 E-value=1.5e-12 Score=132.11 Aligned_cols=225 Identities=14% Similarity=0.069 Sum_probs=126.5
Q ss_pred Hhhhchhhhhhhcc-----chhH-HHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCC
Q 012075 72 TIFGILGGGIYNIL-----GPQV-TLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPP 145 (471)
Q Consensus 72 ~i~~~~~g~l~d~~-----Grk~-~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~ 145 (471)
.+..+++|+++||+ |||+ .+.++.+...+............+.+.+++..++.++..+...++..+++.|+.|+
T Consensus 46 ~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~ 125 (402)
T PRK11902 46 YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHP 125 (402)
T ss_pred HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 46779999999999 8876 56666665544333322211124577788888888888888888899999999999
Q ss_pred CchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCCCCccccccCC
Q 012075 146 NRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDDGTHCTNIKYS 225 (471)
Q Consensus 146 ~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~~~~~~~~~~~ 225 (471)
++|+++.++......+|.++|+.+...+... ..+|+.. +++..++..+..+..++.++|+..++ +++ +.++
T Consensus 126 ~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~---~~gw~~~-f~i~a~~~l~~~l~~~~~~e~~~~~~--~~~---~~~~ 196 (402)
T PRK11902 126 EERGAGAAVKVLGYRLAMLVSGGLALWLADR---VLGWGNT-YLLMAGLMLAGALTTLWAPEPEVPAR--PPR---SLGE 196 (402)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc---ccCHHHH-HHHHHHHHHHHHHHHHhcCCCccccc--ccc---hhHH
Confidence 9999999999999999999998876444321 1134433 33333333332222223322221111 000 0011
Q ss_pred CHHHHHHHHHHHhcchhHHHHHHHHHHhH----hHhhhccccccc--cccccchhhhHHHHHH-HHHHHHhhhhhhhccc
Q 012075 226 NVSTEITQVLKLFSNWKMLLIFPASWASN----FFYSYQFNNVNG--LQFNLRTRGLNNVFYW-GAQMLGSVGIGYIFDF 298 (471)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~----~~~s~~~~~~~~--~~~~~~~~~l~~~~~~-i~~i~g~~~~g~l~D~ 298 (471)
+.++.+ .+.+++|+++......+... ..+++. +.+.. .+++.++.++.....+ ++.+++.++.+++.||
T Consensus 197 ~~~~~~---~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~-~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r 272 (402)
T PRK11902 197 AVVGPL---RDFFSRRGAWALLLLIVLYKLGDAFAGSLS-TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVR 272 (402)
T ss_pred HHHHHH---HHHHhCcCHHHHHHHHHHHHhHHHHHHHHH-HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 122222 23445565433322211111 111111 11121 2333334455443434 4578899999999999
Q ss_pred CCCCccceeeehh
Q 012075 299 SFPTRRKRGFVGI 311 (471)
Q Consensus 299 ~~~gRr~~~~~g~ 311 (471)
+|||+....+.
T Consensus 273 --~g~~~~l~~~~ 283 (402)
T PRK11902 273 --LGLYRSLMLFG 283 (402)
T ss_pred --HhHHHHHHHHH
Confidence 78887654443
No 92
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.57 E-value=1.9e-12 Score=134.35 Aligned_cols=137 Identities=20% Similarity=0.206 Sum_probs=96.4
Q ss_pred HHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCC
Q 012075 65 TALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPP 144 (471)
Q Consensus 65 ~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~ 144 (471)
....+..++++++.|.++|.+|||+.++++.+++++ +... .+.++|...++++-.+.|+|.|..... ...++|..|
T Consensus 85 ~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vv--G~Iv-~atA~~~~~~iag~~l~GvgaG~~~~~-~~~isEl~p 160 (599)
T PF06609_consen 85 TAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVV--GSIV-CATAQNMNTFIAGMVLYGVGAGVQELA-ALAISELVP 160 (599)
T ss_pred HHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHh--HHHH-hhcCCcHHHHHHHHHHHHHhhHHHHHH-HHHHHHhcc
Confidence 334456778889999999999999999999998776 3333 355899999999999999999887654 444799999
Q ss_pred CCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHH-HHhccCCCc
Q 012075 145 PNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALL-SLVILPPGR 210 (471)
Q Consensus 145 ~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~l~~p~~ 210 (471)
.|.|+...++..........+|+.++..+.. ..+|||..|+.. .+..+++++ .+|.+||++
T Consensus 161 ~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~----~~~WRw~~~~~~-i~~~i~~vl~~~fY~PP~~ 222 (599)
T PF06609_consen 161 NKWRGLGLAIASIPFIITTWISPLIAQLFAA----HSGWRWIFYIFI-IWSGIALVLIFFFYFPPPR 222 (599)
T ss_pred cchhhhHhHHHHHHHHhhhcccHHHHHHhcc----CCCcchHHHHHH-HHHHHHHHHHHHHhCCCch
Confidence 9999887776655544445566666643322 246888766443 344444433 445566653
No 93
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.57 E-value=9.6e-13 Score=132.59 Aligned_cols=303 Identities=9% Similarity=-0.030 Sum_probs=167.4
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchh----HHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHH
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQ----VTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLL 131 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk----~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~ 131 (471)
++...+...++......++++++|+++||+||| +.+.++.++..+ . ....+++.|.+++.|++.|++.+..
T Consensus 37 s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~l~i~~~l~g~~~~~~ 111 (382)
T PRK11128 37 TPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAV---A--FWFGAHSFWLLFVAIGLFNLFFSPL 111 (382)
T ss_pred CHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHH---H--HHHhcccHHHHHHHHHHHHHHHccc
Confidence 456667777777888888899999999999983 333333322211 1 1122578999999999999998888
Q ss_pred HhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCcc
Q 012075 132 WAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRV 211 (471)
Q Consensus 132 ~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~ 211 (471)
+++..++..++ +++|++..+......++|..+||.++..+... .+|+.. ++...+...+.. +..++.| +..
T Consensus 112 ~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~----~g~~~~-f~~~~~~~~~~~-~~~~~~~-~~~ 182 (382)
T PRK11128 112 VPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW----FGEQAI-LWILTAGVASML-LGQLLRP-TIM 182 (382)
T ss_pred ccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH----cChhHH-HHHHHHHHHHHH-HHHHccC-CCC
Confidence 77766676665 55688888888888899999999998444322 134433 222222222222 2222333 211
Q ss_pred ccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHh----Hhhhcccccc-ccccccchhhhHHHHHHHHHH
Q 012075 212 IRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNF----FYSYQFNNVN-GLQFNLRTRGLNNVFYWGAQM 286 (471)
Q Consensus 212 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~----~~s~~~~~~~-~~~~~~~~~~l~~~~~~i~~i 286 (471)
+++++++ ++++.+ ++..+.+++|+++......+..+. .+++. +.+. +.+.+....++......++.+
T Consensus 183 ~~~~~~~----~~~~~~---~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~g~s~~~~g~~~~~~~~~~~ 254 (382)
T PRK11128 183 PQGESRQ----QESAGW---PAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFS-AIYWQAAGYSASTIGYLWSLGVVAEV 254 (382)
T ss_pred Ccccccc----cccccc---chHHHHHcChhHHHHHHHHHHHHHHhHhHHHHH-HHHHHHCCCCHhHHHHHHHHHHHHHH
Confidence 1111100 000111 122334566766544433222221 11222 2222 223344445655556677888
Q ss_pred HHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHH
Q 012075 287 LGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAM 366 (471)
Q Consensus 287 ~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 366 (471)
+...+.+++.|| +|+|+....+...+. +.... +. +. ++.....+..+++|+..+.
T Consensus 255 ~~~~~~g~l~~r--~~~~~~l~~~~~~~~-~~~~~----~~----~~--------------~~~~~~~~~~~l~g~~~~~ 309 (382)
T PRK11128 255 LIFAFSNRLFRR--WSARDLLLLSAICGV-VRWGL----MG----ST--------------TALPWLIVIQILHCGTFTV 309 (382)
T ss_pred HHHHHHHHHHHH--CCHHHHHHHHHHHHH-HHHHH----HH----hh--------------hhHHHHHHHHHHHHHHHHH
Confidence 888889999998 788887655443331 11111 10 00 1222345566677777776
Q ss_pred HHHHHHHHHHHhcCCchhhhHHHHHHHHHH-HHHHHHHhhhc
Q 012075 367 FQSMVYWVIGALADDSETLSRYSGFYKGVQ-SAGAAVAWQVD 407 (471)
Q Consensus 367 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-s~g~~i~~~~~ 407 (471)
..+....++.+.. +.+.++..+.++... ++|.+++..+.
T Consensus 310 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~ig~~i~ 349 (382)
T PRK11128 310 CHLAAMRYIAARP--GSEVIRLQALYSALAMGGSIAIMTVLS 349 (382)
T ss_pred HHHHHHHHHHHCC--HhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666555666654 334467777666442 44444444443
No 94
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.54 E-value=5.3e-12 Score=131.00 Aligned_cols=114 Identities=17% Similarity=0.197 Sum_probs=86.7
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhc-cchhHHHHHHHHHHHHHHHHHHhhhcccchH-HHHHHHHHHhhhhhHHHhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNI-LGPQVTLISACSTYVLYAGSFLYYNHHKHQA-FAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~-~li~~r~l~G~g~g~~~~~ 134 (471)
+.......+.......+..+++|+++|| +|||++++++.+++.+....... +.+.. .++++|+++|+|.|...+.
T Consensus 49 ~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~---~~~~~~ll~~~~~l~~ig~g~~~~~ 125 (489)
T PRK10207 49 QEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGM---SLLKPDLIFIALGTIAVGNGLFKAN 125 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHH---hccchhHHHHHHHHHHhccccccCC
Confidence 3333334444444555666799999999 99999999999988774433222 34433 4668999999999999888
Q ss_pred hhhhhccCCCCC--chhhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 135 EGAIMTSYPPPN--RKGTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 135 ~~~~i~~~~~~~--~RG~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
..+.+.|..|++ +|++..+++....++|..+||.++..+
T Consensus 126 ~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l 166 (489)
T PRK10207 126 PASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVI 166 (489)
T ss_pred HHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 889999998876 568899999999999999999887433
No 95
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.52 E-value=9.6e-12 Score=127.20 Aligned_cols=338 Identities=10% Similarity=0.041 Sum_probs=170.1
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhh----ccchhHHHHHHHHHHHHHHHHHHhhhcccchH-----------------
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYN----ILGPQVTLISACSTYVLYAGSFLYYNHHKHQA----------------- 115 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d----~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~----------------- 115 (471)
+..........-....+.+++.|.++| |+|||+.++++..+..+.....+ ..+++.+
T Consensus 38 ~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll--~~~~~~~~~~~~~~~~~~~~~~i~ 115 (477)
T TIGR01301 38 HAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILI--GFAADIGHLFGDNLDKKTKPRAII 115 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHH--HhCchhhhhccccccccchhHHHH
Confidence 444444445555666778899999999 59999999886544333111111 1122221
Q ss_pred HHHHHHHHHhhhhhHHHhhhhhhhccCCCCCch--hhHHHHHHHHHHhhhhhhhHHHHHhhcc------CCCc-c----c
Q 012075 116 FAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRK--GTYISIFWSIFNMGGVIGGLIPFILNYN------RNEA-V----S 182 (471)
Q Consensus 116 ~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~R--G~~~g~~~~~~~~G~~iG~~i~~~~~~~------~~~~-~----~ 182 (471)
..+++=.+..++.........++++|..|+++| +++.+++..+.++|.++|+.++...... ..+. + +
T Consensus 116 ~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~ 195 (477)
T TIGR01301 116 VFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCAN 195 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccch
Confidence 222333344446666666778899999998865 6899999999999999999987422100 0000 0 1
Q ss_pred cccchhHHHHHHHHHHHHHHHhccCCCccccCCCC---ccccccCCCHHHHHHHHHHHhcc-h-hHHHHHHHH--HHhHh
Q 012075 183 VNDGTYIGFMCFMSAGALLSLVILPPGRVIRDDGT---HCTNIKYSNVSTEITQVLKLFSN-W-KMLLIFPAS--WASNF 255 (471)
Q Consensus 183 ~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~-~~ll~~~~~--~~~~~ 255 (471)
.++. |.+-.++..+..+..++..++++...+++. +....++.+..+.++++++.+++ | .+..++... .+.++
T Consensus 196 ~~~~-F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~ 274 (477)
T TIGR01301 196 LKSC-FLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAW 274 (477)
T ss_pred HHHH-HHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 1112 222222222222233333333322111111 11111111112234455554432 3 333333333 33444
Q ss_pred Hhhhcc-ccccc-ccccc------c-hh-----hhHHHHHHHHHHHHhhhhhhhcccCCCCc-cceeeehhhhHHHHHHH
Q 012075 256 FYSYQF-NNVNG-LQFNL------R-TR-----GLNNVFYWGAQMLGSVGIGYIFDFSFPTR-RKRGFVGIVVVALLGSA 320 (471)
Q Consensus 256 ~~s~~~-~~~~~-~~~~~------~-~~-----~l~~~~~~i~~i~g~~~~g~l~D~~~~gR-r~~~~~g~~~~~~~~~~ 320 (471)
+....| +.+.. ..|+. . +. .+..+.+.+...+.+++.-++.+| +|+ |+....+..+.+.+...
T Consensus 275 f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~--~g~~k~~~~~s~~~~~~~l~~ 352 (477)
T TIGR01301 275 FPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRG--WGAGKRLWGIVNIILAICLAA 352 (477)
T ss_pred HHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccchhHHHHHHHHHHHHHHH
Confidence 221111 22221 11110 0 11 233455566666666666667766 775 45444443333222111
Q ss_pred HHHhHhhhhcccCCCC-C--CCccCCCCCCCC-chhHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CchhhhHHHHHHHHH
Q 012075 321 IWAGGLANQLNYSHDK-P--PAKLDFKNSGSD-FAGPFVLYFCYGLLDAMFQSMVYWVIGALAD-DSETLSRYSGFYKGV 395 (471)
Q Consensus 321 ~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~ 395 (471)
... ....+++. + .....+... .+ ....++++...|+..+..++.+|.++++.-+ +.++.+..+|++|.+
T Consensus 353 ~~~-----i~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~ 426 (477)
T TIGR01301 353 TVL-----VTYVAKNSRYYDGDGESLPPP-TGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLA 426 (477)
T ss_pred HHH-----HHhhhhccccccccccccCcc-hhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHH
Confidence 111 11111000 0 000011110 11 2346778888999999999999999999873 346668899999988
Q ss_pred HHHHHHHHhh
Q 012075 396 QSAGAAVAWQ 405 (471)
Q Consensus 396 ~s~g~~i~~~ 405 (471)
..+...+.-.
T Consensus 427 I~lpQii~sl 436 (477)
T TIGR01301 427 IVIPQIIVSL 436 (477)
T ss_pred HHHHHHHHHH
Confidence 8777766654
No 96
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.51 E-value=2.5e-11 Score=125.73 Aligned_cols=115 Identities=13% Similarity=0.130 Sum_probs=94.0
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhc-cchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNI-LGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
++...+...+.......++++++|+++|| +|||+++.++.+++.+..... ..+++.+.++++|++.|+|.|...+.
T Consensus 46 s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~---~~~~~~~~~~~~~~l~g~g~g~~~~~ 122 (475)
T TIGR00924 46 SQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFML---AMSIYPDLIFYGLGTIAVGSGLFKAN 122 (475)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHH---HhcccHhHHHHHHHHHHhccccccCC
Confidence 34455666777777788899999999999 899999999998877633222 23567788899999999999998888
Q ss_pred hhhhhccCCCCCc---hhhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 135 EGAIMTSYPPPNR---KGTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 135 ~~~~i~~~~~~~~---RG~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
..+.++|..|+++ |+++.++++...++|..+|+.+...+
T Consensus 123 ~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l 164 (475)
T TIGR00924 123 PSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVI 164 (475)
T ss_pred HHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHH
Confidence 8888888887654 89999999999999999999987433
No 97
>PTZ00207 hypothetical protein; Provisional
Probab=99.51 E-value=5.4e-12 Score=131.76 Aligned_cols=98 Identities=18% Similarity=0.217 Sum_probs=78.5
Q ss_pred HHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhh---cccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCc
Q 012075 71 FTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYN---HHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNR 147 (471)
Q Consensus 71 ~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~---~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~ 147 (471)
.++..++.|++.||+|||++++++.+.+.+......... ..++.+.+++.|++.|+|.+...++....+.+++ |++
T Consensus 74 ~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~F-p~~ 152 (591)
T PTZ00207 74 VGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVF-PSN 152 (591)
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hhh
Confidence 345667789999999999999999998776443333210 0258899999999999999998888888888886 589
Q ss_pred hhhHHHHHHHHHHhhhhhhhHH
Q 012075 148 KGTYISIFWSIFNMGGVIGGLI 169 (471)
Q Consensus 148 RG~~~g~~~~~~~~G~~iG~~i 169 (471)
||+++|+......+|..+.+.+
T Consensus 153 RG~a~Gi~~~~~gLGsaI~~~l 174 (591)
T PTZ00207 153 RGAVVAIMKTFTGLGSAILGSI 174 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999754333
No 98
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.50 E-value=3.7e-12 Score=131.59 Aligned_cols=377 Identities=11% Similarity=-0.030 Sum_probs=195.6
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccc-----hhHHHHHHHHHHHHHHHHHHhhhcccchH-HHHHHHHHHhhhhhH
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILG-----PQVTLISACSTYVLYAGSFLYYNHHKHQA-FAIAAGAILGIGAGL 130 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~G-----rk~~l~i~~~~~~~~~~~~~~~~~~~~~~-~li~~r~l~G~g~g~ 130 (471)
+...+...+...+...+-++ +|+++|+++ ||+.++++.++... .+....+..++.. ...+..++.+++.+.
T Consensus 60 ~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~--~~~~~l~~~~~~~~~~~~~~~l~~~~~a~ 136 (468)
T TIGR00788 60 GARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSA--ILYGLLPGKVSSAKVAAAFIFLAALAKAL 136 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHH--HHHHhcccccchHHHHHHHHHHHHHHHHH
Confidence 44444445555666555444 999999998 88888888765421 1212112223433 444589999999999
Q ss_pred HHhhhhhhhccCCCCCchhh---HHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccC
Q 012075 131 LWAAEGAIMTSYPPPNRKGT---YISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILP 207 (471)
Q Consensus 131 ~~~~~~~~i~~~~~~~~RG~---~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~ 207 (471)
.-++..++..|..+ |+++. ..++.+....+|.++|+.++..+... .+|+.. +.+..++..+..+..+++.+
T Consensus 137 ~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~----~~~~~~-f~~~a~l~ll~~~~~~~~~E 210 (468)
T TIGR00788 137 YDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDK----TLTRIL-FLITAALLLLQLFVSNLSKE 210 (468)
T ss_pred HHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh----cCcchH-HHHHHHHHHHHHHHHHhccc
Confidence 98888899999887 44433 44556666678999998887433211 123333 33333344433333334433
Q ss_pred CCccccCCCCccc----cccCC----CHHHHHHHHHHHhcchhHHHHHH-HHH-HhHhHhhhcccc--c--cccccccch
Q 012075 208 PGRVIRDDGTHCT----NIKYS----NVSTEITQVLKLFSNWKMLLIFP-ASW-ASNFFYSYQFNN--V--NGLQFNLRT 273 (471)
Q Consensus 208 p~~~~r~~~~~~~----~~~~~----~~~~~~~~~~~~~~~~~~ll~~~-~~~-~~~~~~s~~~~~--~--~~~~~~~~~ 273 (471)
++...+++..+.. ..... ..++.+++.++.+++|+++.... +++ +... .+...+. + ...+++...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~-~~~~~~~f~~~~~~lG~s~~~ 289 (468)
T TIGR00788 211 RRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANL-PGASGSVFCATTQCLPGGPSF 289 (468)
T ss_pred ccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhc-CCCCceeEEEEcccCCCCcch
Confidence 2211111000000 00000 12333455666667776654222 222 1111 0000000 1 112445556
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhH
Q 012075 274 RGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGP 353 (471)
Q Consensus 274 ~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (471)
.++.....+++.+++....+++.+| ++.|+...++.++......... .....+.. .... +.....
T Consensus 290 ~G~~~~~~~v~~i~g~~~~~~~~~~--~~~r~~l~~~~~l~~~~~~~~~----~l~~~~~~-------~~gi--~~~~~~ 354 (468)
T TIGR00788 290 SGMSKVVGNLGSLCGVGGYDRFLKT--FPYRLLFGVTTLLYTLSSLFDL----ILVKRWNL-------AFGI--SDEVFV 354 (468)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhh--CCHHHHHHHHHHHHHHHHhCce----eeeecccc-------ccCC--CCeeee
Confidence 7777777889999999999988876 7888766555443311111000 00000100 0000 111112
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccCc---h--h--hHHHHHHHHHHHh
Q 012075 354 FVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTHKV---S--L--LSQLVVNWSLTTI 426 (471)
Q Consensus 354 ~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~~~---p--~--~~~~~~~~~~~~~ 426 (471)
....++.++..+........++.++.++ +..++.++++.+++++|..++-.++.... + . ...+.....+..+
T Consensus 355 ~~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~ 433 (468)
T TIGR00788 355 LGDSIIAEVLAQLKFMPFLVLLARLCPS-GCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSL 433 (468)
T ss_pred eehhHHHHHHHHHHHccHHHHHHHhCCC-CceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHH
Confidence 3334455566555555566677887743 34489999999999999999887654321 1 1 1111121122222
Q ss_pred hhhhhhheeeeeeccCCCccCccccccCcCCCCCC
Q 012075 427 SYPLLVILVLLAVKDEKSPEESTNSKEVTLPAADD 461 (471)
Q Consensus 427 ~~~~~i~~~~~~~pet~~~~~~~~~~~~~~~~~~~ 461 (471)
.-+..+++++ ++|+ .++|-+..+|++.++++.|
T Consensus 434 ~~l~~l~~~~-llP~-~~~~~~~~~~~~~~~~~~~ 466 (468)
T TIGR00788 434 APLLPLPLLH-LLPR-LEDVIDTEGKRAISKAAPE 466 (468)
T ss_pred HHHHHHHHHH-hCCC-CccccCccchhhhhhhccc
Confidence 2344555554 7898 5555555555555555443
No 99
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.49 E-value=3.7e-13 Score=128.02 Aligned_cols=347 Identities=13% Similarity=0.106 Sum_probs=191.2
Q ss_pred hhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhh
Q 012075 60 ANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIM 139 (471)
Q Consensus 60 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i 139 (471)
..+.....+.++-+++..+|.++|++|||+.+.+..+.-.++ +.+. ..++|+..+.+.|.+.|+|.|. .+...++-
T Consensus 115 ~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~--~~is-~~spnf~~L~~f~~l~~~g~gg-~pv~~~~y 190 (528)
T KOG0253|consen 115 APLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVF--GVIS-GASPNFASLCVFRALWGFGVGG-LPVDSAIY 190 (528)
T ss_pred hhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHH--HHhh-cCCCCeehhhHHHHHHhccCCC-ccHhHHHH
Confidence 344556677888999999999999999999999988765542 2222 3478999999999999999998 55556666
Q ss_pred ccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccC--CCcc--c---
Q 012075 140 TSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILP--PGRV--I--- 212 (471)
Q Consensus 140 ~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~--p~~~--~--- 212 (471)
.|.-|..+|+..+-.. ..+.+|.++...+.++...+. +|||.++....-+. +.+ .+.+..| ||.. .
T Consensus 191 le~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~----gwr~~l~~~~~pl~-~~a-~f~~w~~ESpRf~~~~G~~ 263 (528)
T KOG0253|consen 191 LEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNF----GWRYLLFTSSTPLM-FAA-RFLVWVYESPRFYLAKGDD 263 (528)
T ss_pred HHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhh----hHHHHHHHHHhHHH-HHH-HHHhhcccCcchhhhcCCh
Confidence 7888999999988887 889999999999998765432 46655443331111 111 2233334 3321 0
Q ss_pred -----------cCCCCccc-----------cccCC------------CHHHHHHHHHHHhcchhHHHHHHHHHHhHh-Hh
Q 012075 213 -----------RDDGTHCT-----------NIKYS------------NVSTEITQVLKLFSNWKMLLIFPASWASNF-FY 257 (471)
Q Consensus 213 -----------r~~~~~~~-----------~~~~~------------~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~-~~ 257 (471)
|..+.+.+ +++++ +.+....+++.--.||+-+++..+.+...+ +|
T Consensus 264 ~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyy 343 (528)
T KOG0253|consen 264 YKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYY 343 (528)
T ss_pred HHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHH
Confidence 11110000 00000 000011111111134444444444443333 12
Q ss_pred hhcccc---------------cccccccc-------chhhhH-HHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhH
Q 012075 258 SYQFNN---------------VNGLQFNL-------RTRGLN-NVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVV 314 (471)
Q Consensus 258 s~~~~~---------------~~~~~~~~-------~~~~l~-~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~ 314 (471)
+.++-+ ...+.... ....+. .+.....++.|.++.+.++|| +|||+.+-...+++
T Consensus 344 g~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iver--lGRKkTMal~l~~f 421 (528)
T KOG0253|consen 344 GSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVER--LGRKKTMALSLILF 421 (528)
T ss_pred HHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHH--hcchhHHHHHHHHH
Confidence 211100 00000000 011122 345678889999999999999 89999665444333
Q ss_pred HHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHH
Q 012075 315 ALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKG 394 (471)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 394 (471)
.++.+..+ . +. + ++ ......+..=.|.++++ ...|.|.+|.|+.. -++.++|.-..
T Consensus 422 ~iflfll~------~------------c~-~--rn-~~tvllf~arafisg~f-qvaYvYtPEVyPTa-vRatgvGtcSs 477 (528)
T KOG0253|consen 422 GIFLFLLT------T------------CK-T--RN-AYTVLLFTARAFISGAF-QVAYVYTPEVYPTA-VRATGVGTCSS 477 (528)
T ss_pred HHHHHHHH------H------------hc-C--cc-hhHHHHHHHHHHHhchh-eEEEEecCcccchh-hhhcchhhhhh
Confidence 22222111 0 10 1 11 12233333334444444 45788899999432 33677777676
Q ss_pred HHHHHHHHHhhhcccCchhhHHHHHHHHHHHhhhhhhhheeeeeeccCCCcc
Q 012075 395 VQSAGAAVAWQVDTHKVSLLSQLVVNWSLTTISYPLLVILVLLAVKDEKSPE 446 (471)
Q Consensus 395 ~~s~g~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~~~~~~pet~~~~ 446 (471)
+.-+|..++-++.-.. .....+...++..+++.+.+.+-++.-||+..+
T Consensus 478 maRIggI~~p~iA~~~---e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~ 526 (528)
T KOG0253|consen 478 MARIGGIFSPVIAMRA---ELSTSLPIFVYGALFILAGIAVCFFPIETKGRS 526 (528)
T ss_pred HHhhhhhhhhHHHHHh---ccceeehHHHHHHHHHHHHHHheeeeeccCCCC
Confidence 6667776666554111 001123444454444443444557777887653
No 100
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.45 E-value=1.1e-10 Score=120.07 Aligned_cols=359 Identities=13% Similarity=0.118 Sum_probs=185.7
Q ss_pred hHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHH-HHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhh
Q 012075 61 NNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVL-YAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIM 139 (471)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~-~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i 139 (471)
.+..++..+..++-.++.|.++|+-|+|+-++........ ....++. ...++.+...+.-++.-++.+...+.-.+++
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~-v~~~~~~~~~~l~iia~v~~~~~~vfyna~L 151 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWF-VSPGQWWLALVLFIIANVGYEASNVFYNAYL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH-hCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445566666777788999999999987777666544333 2222222 1123333334444444455555566678889
Q ss_pred ccCCCCCch--------------------------hhHHHHHHHHHHhhhhhhhHHHHHhhccCCCc----cccccchhH
Q 012075 140 TSYPPPNRK--------------------------GTYISIFWSIFNMGGVIGGLIPFILNYNRNEA----VSVNDGTYI 189 (471)
Q Consensus 140 ~~~~~~~~R--------------------------G~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~----~~~~~~~~~ 189 (471)
.|+++++++ ++..+.-+..-++|.++.-++........++. ...|....+
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~ 231 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLI 231 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHH
Confidence 999998888 99999999999999988877765543322211 011111111
Q ss_pred HHHHHHHHHHHHHHhccCCCccccCCCCccccccCCCHHHHHHHHHHHh----cchhHHHHHH-HHHHh-Hh--Hhhhcc
Q 012075 190 GFMCFMSAGALLSLVILPPGRVIRDDGTHCTNIKYSNVSTEITQVLKLF----SNWKMLLIFP-ASWAS-NF--FYSYQF 261 (471)
Q Consensus 190 ~~~~~~~~~~i~~~~l~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ll~~~-~~~~~-~~--~~s~~~ 261 (471)
......++..... ++.|+++..+..+. .+...++.++++++.+ +.|.+..... .+++. ++ ..+..
T Consensus 232 ~a~ww~vfsiP~~-~~~~~~~~~~~~~~-----~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~- 304 (477)
T PF11700_consen 232 VALWWLVFSIPLF-LWLPDRPGPRPLPS-----GSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFA- 304 (477)
T ss_pred HHHHHHHHHHHHH-HhCCCCCCCCCCCc-----chhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 1111112222222 23333321111100 1111222333333322 2333322222 12222 21 00110
Q ss_pred ccccc--cccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCcc--ceeeehhhhHHHHHHHHHHhHhhhhcccCCCCC
Q 012075 262 NNVNG--LQFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRR--KRGFVGIVVVALLGSAIWAGGLANQLNYSHDKP 337 (471)
Q Consensus 262 ~~~~~--~~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (471)
..+.. .+++..+.....+...+.+++|+++.|++.|| +|-| +.++.+.++... ...++ + ....++
T Consensus 305 ~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r--~g~k~~~~l~~~l~~~~~--i~~~g--~--~G~~~~--- 373 (477)
T PF11700_consen 305 GIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR--FGPKTKRTLLISLILWII--IPLYG--L--FGFWPS--- 373 (477)
T ss_pred HHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCchhHHHHHHHHHHHH--HHHHH--H--HHhhhc---
Confidence 11111 13343344455677899999999999999999 6665 544443332211 11111 1 000110
Q ss_pred CCccCCCCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccCchhhHHH
Q 012075 338 PAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTHKVSLLSQL 417 (471)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~~~p~~~~~ 417 (471)
..+. ...+..++..+++|++.+..|+..-++.+++.++.++ ++.+|++....-.++.++-++-....-...
T Consensus 374 --~~g~----~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e-~efFgly~i~gk~ss~lGPll~g~i~~~tg-- 444 (477)
T PF11700_consen 374 --FFGL----KSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGRE-AEFFGLYAITGKASSWLGPLLFGLITDATG-- 444 (477)
T ss_pred --ccCc----ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--
Confidence 0011 1122357777889999999999999999999965544 899999998877777766554332111110
Q ss_pred HHHHHHHHhhh--hhhhheeeeeeccCCCccCc
Q 012075 418 VVNWSLTTISY--PLLVILVLLAVKDEKSPEES 448 (471)
Q Consensus 418 ~~~~~~~~~~~--~~~i~~~~~~~pet~~~~~~ 448 (471)
...+++..+.. +...+ .++.+++++..||.
T Consensus 445 ~~r~g~~~l~~lf~~gl~-ll~~v~~~~g~~~A 476 (477)
T PF11700_consen 445 SQRYGFLFLLVLFLIGLI-LLFFVDVEKGREDA 476 (477)
T ss_pred CchhHHHHHHHHHHHHHH-HHhhccchhhhhcc
Confidence 02233222211 22223 33667888776653
No 101
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.43 E-value=3.9e-11 Score=116.49 Aligned_cols=287 Identities=17% Similarity=0.170 Sum_probs=172.7
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
+...........|.++.+.++..+.+.+|+|+|..+++|..++.+....++-.+...++.+++++-++.|.|.+..-+++
T Consensus 46 s~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~Letaa 125 (422)
T COG0738 46 TYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAA 125 (422)
T ss_pred cHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhcc
Confidence 34455666777889999999999999999999999999999998854444332334677889999999999999999999
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccC-----CCc----------cccccchhHHHHHHHHHHHH
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNR-----NEA----------VSVNDGTYIGFMCFMSAGAL 200 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~-----~~~----------~~~~~~~~~~~~~~~~~~~i 200 (471)
..|++.+.++++..+-+++.+.++.+|.++||+++..+..+. ++. ..++ ..|.....+..+..+
T Consensus 126 Np~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~-~pYl~~~~~lvll~v 204 (422)
T COG0738 126 NPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQ-FPYLILAGLLVLLAV 204 (422)
T ss_pred chHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999974433210 000 0111 234444433333333
Q ss_pred HHHhccCCCccccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHH-HHHHHhHh---Hhhhccccccc--cccccchh
Q 012075 201 LSLVILPPGRVIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIF-PASWASNF---FYSYQFNNVNG--LQFNLRTR 274 (471)
Q Consensus 201 ~~~~l~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-~~~~~~~~---~~s~~~~~~~~--~~~~~~~~ 274 (471)
.....+.|+.. +++++. .++++. ...+.+++|+..+.. -+++|.|. ..++. .++.. ...+..+.
T Consensus 205 ~~~~~k~p~~~--~~~~~~--~~~~~~-----~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl-~~y~~~~~g~~~~~a 274 (422)
T COG0738 205 LILLSKLPDLQ--VAAPSL--GASGSA-----GLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFL-VSYLEELLGLNEQQA 274 (422)
T ss_pred HHHhccCCcCC--cccccc--cccccc-----hHHHHHhChHHHHHHHHHHHHHhHHHHHHHHH-HHHHHhcCCccHHHH
Confidence 33333334321 111110 011110 122344556654443 34455543 22333 33332 23344445
Q ss_pred hhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHH
Q 012075 275 GLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPF 354 (471)
Q Consensus 275 ~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (471)
+.....+.++.++|..++..+..|+. .+|-+........ ..... .++. .+. ..+
T Consensus 275 a~~~s~~~~~~~vGRFig~~lm~~~~-~~k~Laf~a~~~i-----ll~~~-~~l~------------------~g~-v~~ 328 (422)
T COG0738 275 AYYLSFFWVGFMVGRFIGSALMSRIK-PEKYLAFYALIAI-----LLLLA-VALI------------------GGV-VAL 328 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHH-----HHHHH-HHHh------------------cCh-HHH
Confidence 56667778888899888877777732 2333222221111 11110 0101 122 234
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHhc
Q 012075 355 VLYFCYGLLDAMFQSMVYWVIGALA 379 (471)
Q Consensus 355 ~~~~~~g~~~~~~~~~~~~~i~~~~ 379 (471)
...++.|++.+...|.++++.-+..
T Consensus 329 ~~l~~ig~F~simfPTIfslal~~l 353 (422)
T COG0738 329 YALFLIGLFNSIMFPTIFSLALKNL 353 (422)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhcc
Confidence 4555668888888888887765554
No 102
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.41 E-value=8.3e-11 Score=121.98 Aligned_cols=325 Identities=8% Similarity=-0.016 Sum_probs=166.2
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhh----ccch-hHHHHHHHHHHHHHHHHHHhhh-cccc--hHHHHHHHHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYN----ILGP-QVTLISACSTYVLYAGSFLYYN-HHKH--QAFAIAAGAILGIG 127 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d----~~Gr-k~~l~i~~~~~~~~~~~~~~~~-~~~~--~~~li~~r~l~G~g 127 (471)
++...+....+.-..-++..++.|.++| |+|| |+-++++.+...+.....+... ..++ ...+++.-++.+++
T Consensus 40 s~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~ 119 (473)
T PRK10429 40 SVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMT 119 (473)
T ss_pred CHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHH
Confidence 3555555555566667788899999999 6698 5555566665544322222210 0111 23455666677788
Q ss_pred hhHHHhhhhhhhccCC-CCCchhhHHHHHHHHHHhhhhhhhHHHHHh-hccCCCccccccch-hHHHHHHHHHHHHHHHh
Q 012075 128 AGLLWAAEGAIMTSYP-PPNRKGTYISIFWSIFNMGGVIGGLIPFIL-NYNRNEAVSVNDGT-YIGFMCFMSAGALLSLV 204 (471)
Q Consensus 128 ~g~~~~~~~~~i~~~~-~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~ 204 (471)
.+...+.-.+...|++ ++++|.+..++-....++|..+++.+...+ ....+......+.. ..+..++..+..+..++
T Consensus 120 ~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~ 199 (473)
T PRK10429 120 YTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLR 199 (473)
T ss_pred HHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 8877777778889988 699999999986666677655554443211 11110000001111 11222222222222222
Q ss_pred ccCCCccccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHh----Hhhhccccccccccc-cchhhhHHH
Q 012075 205 ILPPGRVIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNF----FYSYQFNNVNGLQFN-LRTRGLNNV 279 (471)
Q Consensus 205 l~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~----~~s~~~~~~~~~~~~-~~~~~l~~~ 279 (471)
..+++.. + ++.+..++++.+.++.++.. +++|.++.+....+.... ..++. ..+..+..+ ....+....
T Consensus 200 ~~~e~~~-~-~~~~~~~~~~~~~~~~~~~~---~~n~~~~~ll~~~~~~~~~~~~~~~~~-~y~~~y~~~~~~~~~~~~~ 273 (473)
T PRK10429 200 NVHEVYS-S-DNQVSAEGSHLTLKDIVALI---YKNDQLSCLLGMALAYNIASNIINGFA-IYYFTYVIGDADLFPYYLS 273 (473)
T ss_pred CceecCC-c-cccccccccCCCHHHHHHHH---hcCHHHHHHHHHHHHHHHHHHHHhhhe-eeEEEEECCCHHHHHHHHH
Confidence 2222211 0 10000111233444444332 355554443332222211 11111 111122122 122334444
Q ss_pred HHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHH
Q 012075 280 FYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFC 359 (471)
Q Consensus 280 ~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (471)
..+++.+++.++.+++.|| +|||+..+++..+. +++.+... . ....+ . .+.....+..++
T Consensus 274 ~~~i~~ii~~~~~~~l~~r--~gkk~~~~~~~~~~-~~~~~~~~---~-~~~~~-----------~--~~~~~~~i~~~l 333 (473)
T PRK10429 274 YAGAANLVTLILFPRLVKS--LSRRILWAGASIFP-VLSCGVLL---L-MGLAA-----------P--HNALLIVIAGIL 333 (473)
T ss_pred HHHHHHHHHHHHHHHHHHH--cCcHHHHHHHHHHH-HHHHHHHH---H-HhccC-----------c--hhHHHHHHHHHH
Confidence 5568888998999999998 89998776655433 11111111 0 00001 0 122234455566
Q ss_pred HHhhHHHHHHHHHHHHHHhc------CCchhhhHHHHHHHHHHHHHHHHHhhh
Q 012075 360 YGLLDAMFQSMVYWVIGALA------DDSETLSRYSGFYKGVQSAGAAVAWQV 406 (471)
Q Consensus 360 ~g~~~~~~~~~~~~~i~~~~------~~~~~~~~~~~~~~~~~s~g~~i~~~~ 406 (471)
.+++.+..++..+++++|.. +..|+.+..++...+.+-++.+++..+
T Consensus 334 ~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i 386 (473)
T PRK10429 334 LNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFF 386 (473)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888888887774 223344668888888887887777543
No 103
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.41 E-value=1.4e-10 Score=117.16 Aligned_cols=305 Identities=10% Similarity=0.043 Sum_probs=151.8
Q ss_pred HHHHHhhhchh-hhhhhccchhHHHHHHHHHH-HHHHHHHHhhhcccc-hHHHHHHHHHHhhhhhHHHhhhhhhhccCCC
Q 012075 68 YTTFTIFGILG-GGIYNILGPQVTLISACSTY-VLYAGSFLYYNHHKH-QAFAIAAGAILGIGAGLLWAAEGAIMTSYPP 144 (471)
Q Consensus 68 ~~~~~i~~~~~-g~l~d~~Grk~~l~i~~~~~-~~~~~~~~~~~~~~~-~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~ 144 (471)
+..-.+.++++ +...||+|||+..++...+. ..............+ ...++..-++..+..+..-+....+..|..+
T Consensus 48 ~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~ 127 (390)
T TIGR02718 48 WVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFN 127 (390)
T ss_pred HHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33333444444 44677789999976665332 111111111111222 2233444445555555555555666667777
Q ss_pred CCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCCCCccccccC
Q 012075 145 PNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDDGTHCTNIKY 224 (471)
Q Consensus 145 ~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~~~~~~~~~~ 224 (471)
+++++...+.......+|.++|+.....+... .+|+. .|++..++..+..+..++++|+++ +++++ +
T Consensus 128 ~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~----~gw~~-~f~~~a~l~~~~~~~~~~~~~~~~-~~~~~-------~ 194 (390)
T TIGR02718 128 GRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGK----FGQRP-AFLLVACVPLASLVCVLWLKDRAV-ASPEA-------P 194 (390)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH----hCHHH-HHHHHHHHHHHHHHHHHHcCCCCc-Ccccc-------c
Confidence 77778888888777778888887654222211 12333 344444444443434444433221 11100 0
Q ss_pred CCHHHHHHHHHHHhcchhHHHHHHHHHHhH----hHhhhcccccc-ccccccchhhhHHHHHH-HHHHHHhhhhhhhccc
Q 012075 225 SNVSTEITQVLKLFSNWKMLLIFPASWASN----FFYSYQFNNVN-GLQFNLRTRGLNNVFYW-GAQMLGSVGIGYIFDF 298 (471)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~----~~~s~~~~~~~-~~~~~~~~~~l~~~~~~-i~~i~g~~~~g~l~D~ 298 (471)
+. +.++..+.+++|+++......+... ..+++. +.+. +.+++.++.++.....+ +..+++..+.|++.||
T Consensus 195 ~~---~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r 270 (390)
T TIGR02718 195 LA---RRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLS-KLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRR 270 (390)
T ss_pred hh---hHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHh-hHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 01 1123344556665543333222221 122222 2222 23445555566554444 4566778889999999
Q ss_pred CCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHh
Q 012075 299 SFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSMVYWVIGAL 378 (471)
Q Consensus 299 ~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~ 378 (471)
+|+|+....+........ ..+. .... .+.. +.........++.++..+...+..+....+.
T Consensus 271 --~g~~~~l~~~~~~~~~~~-~~~~---~~~~-----------~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 331 (390)
T TIGR02718 271 --AGLWRTFILGVGLAGSLA-LLWF---AQAA-----------FWLA--PGIAVAWSCSAFGSLITGITSVAIYTAFMRF 331 (390)
T ss_pred --hhHHHHHHHHHHHHHHHH-HHHH---HHHH-----------cccC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788887665543331111 1111 0000 0111 1111222333334445555555556565565
Q ss_pred cCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 379 ADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
..+++..++.++..+...++|..++-.+..
T Consensus 332 ~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G 361 (390)
T TIGR02718 332 AGDGDQAGTDVTAVQSTRDLGELIASSIAG 361 (390)
T ss_pred hCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 543355688999999998888888877654
No 104
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.41 E-value=3.6e-10 Score=117.82 Aligned_cols=98 Identities=14% Similarity=0.226 Sum_probs=76.6
Q ss_pred hhhchhhhhhhc-cchhHHHHHHHHHHHHHHHHHHhhhcc-cchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCC--ch
Q 012075 73 IFGILGGGIYNI-LGPQVTLISACSTYVLYAGSFLYYNHH-KHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPN--RK 148 (471)
Q Consensus 73 i~~~~~g~l~d~-~Grk~~l~i~~~~~~~~~~~~~~~~~~-~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~--~R 148 (471)
..++++|+++|| +|||+.++++.+++.+....+ ..+ ++.+.++++|++.|+|.|...+...+++.|..|++ +|
T Consensus 72 ~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~---~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~ 148 (500)
T PRK09584 72 GLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALV---AWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRL 148 (500)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH---HHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhh
Confidence 345689999999 599999999998876532222 223 34567788999999999988887788899988754 35
Q ss_pred hhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 149 GTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 149 G~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
++.+++++...++|..+||.+...+
T Consensus 149 ~~~~~~~~~~~~iG~~~gp~i~g~l 173 (500)
T PRK09584 149 DGAFTMYYMSINIGSFFSMLATPWL 173 (500)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHH
Confidence 5688999999999999999987433
No 105
>PRK09669 putative symporter YagG; Provisional
Probab=99.40 E-value=1.3e-10 Score=119.60 Aligned_cols=319 Identities=11% Similarity=0.001 Sum_probs=167.5
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhc----cchh-HHHHHHHHHHHHHHHHHHhh-hc--ccchHHHHHHHHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNI----LGPQ-VTLISACSTYVLYAGSFLYY-NH--HKHQAFAIAAGAILGIG 127 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~Grk-~~l~i~~~~~~~~~~~~~~~-~~--~~~~~~li~~r~l~G~g 127 (471)
++...+....+.-...++..++.|.++|| +||| +-++.+.+.+.+.....+.. .. ....+.+++..++.+.+
T Consensus 43 s~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~ 122 (444)
T PRK09669 43 SAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLV 122 (444)
T ss_pred CHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHH
Confidence 45555666666667778888999999999 7874 44556655554432222221 10 11234566667777777
Q ss_pred hhHHHhhhhhhhccCC-CCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCC-ccccccc-hhHHHHHHHHHHHHHHHh
Q 012075 128 AGLLWAAEGAIMTSYP-PPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNE-AVSVNDG-TYIGFMCFMSAGALLSLV 204 (471)
Q Consensus 128 ~g~~~~~~~~~i~~~~-~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~i~~~~ 204 (471)
.+...+...+..+|++ ++++|++..++.....++|..+++.+...+....++ .....|. ..+++.++..+..+..++
T Consensus 123 ~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~ 202 (444)
T PRK09669 123 YTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFF 202 (444)
T ss_pred HHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhC
Confidence 7766666677888887 568999999999988889888887654222111100 0011111 122222222222222222
Q ss_pred ccCCCccccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHh---Hhhhccccccccccccc-hhhhHHHH
Q 012075 205 ILPPGRVIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNF---FYSYQFNNVNGLQFNLR-TRGLNNVF 280 (471)
Q Consensus 205 l~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~---~~s~~~~~~~~~~~~~~-~~~l~~~~ 280 (471)
..+++.. +++ +++.+.++++++ .+++|.++.+....+.... ..+.....+..+..+.. ..+.....
T Consensus 203 ~~~e~~~-~~~------~~~~~~~~~~~~---~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 272 (444)
T PRK09669 203 MTKERYT-PEV------DNSSSVWKDLKL---LLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVT 272 (444)
T ss_pred CeEEecC-CCC------cCCCCHHHHHHH---HhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHH
Confidence 2222111 110 112334444433 3456654443332222111 01111011111222221 22233344
Q ss_pred HHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHH
Q 012075 281 YWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCY 360 (471)
Q Consensus 281 ~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (471)
..+..+++.++.+++.|| +|||+....+......+....+ . .+. .+.....+..++.
T Consensus 273 ~~i~~ii~~~~~~~l~~r--~gk~~~~~~~~~~~~~~~~~~~------~--~~~-------------~~~~~~~~~~~i~ 329 (444)
T PRK09669 273 GMIAGLFGALLSERLLGK--FDRVRAFKWTIVAFVILSALIF------F--IPP-------------SNVWLIFALNILF 329 (444)
T ss_pred HHHHHHHHHHHHHHHHHH--hChHHHHHHHHHHHHHHHHHHH------H--hCc-------------chHHHHHHHHHHH
Confidence 457777888888899999 7898877655433311111111 0 110 1222345555678
Q ss_pred HhhHHHHHHHHHHHHHHhcC-C-----chhhhHHHHHHHHHHHHHHHHHhhhc
Q 012075 361 GLLDAMFQSMVYWVIGALAD-D-----SETLSRYSGFYKGVQSAGAAVAWQVD 407 (471)
Q Consensus 361 g~~~~~~~~~~~~~i~~~~~-~-----~~~~~~~~~~~~~~~s~g~~i~~~~~ 407 (471)
+++.+..++..++++++..+ + .|+.+..++...+.+.+|.+++-.+.
T Consensus 330 g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~ 382 (444)
T PRK09669 330 NFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVV 382 (444)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888877652 1 22335567888877778877775443
No 106
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.32 E-value=4.8e-11 Score=109.92 Aligned_cols=105 Identities=18% Similarity=0.190 Sum_probs=75.6
Q ss_pred HHHHHHHHHh----hhchhhhhhhc-cchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhh
Q 012075 64 NTALYTTFTI----FGILGGGIYNI-LGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAI 138 (471)
Q Consensus 64 ~~~~~~~~~i----~~~~~g~l~d~-~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~ 138 (471)
..++|..+.. -|++.|++.|| +|-|+.-++-++...+....+..-...+..|+++++|++.|+|.-...++|..|
T Consensus 81 ftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~y 160 (459)
T KOG4686|consen 81 FTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKY 160 (459)
T ss_pred eeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcce
Confidence 4455555553 46889999996 676665444443322222111111124678999999999999999999999999
Q ss_pred hccCCCCCchhhHHHHHHHHHHhhhhhhhH
Q 012075 139 MTSYPPPNRKGTYISIFWSIFNMGGVIGGL 168 (471)
Q Consensus 139 i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~ 168 (471)
+..+...++.+..+|++.+.-.+|+.+--+
T Consensus 161 av~wFKGKELn~vfGlqlSvAR~GstvNf~ 190 (459)
T KOG4686|consen 161 AVYWFKGKELNFVFGLQLSVARLGSTVNFL 190 (459)
T ss_pred eEEEecCccccchhhHHHHHHHhhceeeee
Confidence 999999999999999999999999866433
No 107
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.30 E-value=6.9e-11 Score=120.99 Aligned_cols=320 Identities=11% Similarity=0.039 Sum_probs=176.1
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhh----ccchhHHHH-HHHHHHHHHHHHHHhh-h--ccc--chHHHHHHHHHHh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYN----ILGPQVTLI-SACSTYVLYAGSFLYY-N--HHK--HQAFAIAAGAILG 125 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d----~~Grk~~l~-i~~~~~~~~~~~~~~~-~--~~~--~~~~li~~r~l~G 125 (471)
++...+......-...++..++.|.++| |+|||+..+ +|.+...+.....+.. . .+. ....+.+.-++..
T Consensus 35 ~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~ 114 (428)
T PF13347_consen 35 SPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFD 114 (428)
T ss_pred CHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHH
Confidence 3444444444445556677799999999 899776655 5555555433222221 0 001 1234577777778
Q ss_pred hhhhHHHhhhhhhhccCCC-CCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCC-cc--ccccchhHHHHHHHHHHHHH
Q 012075 126 IGAGLLWAAEGAIMTSYPP-PNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNE-AV--SVNDGTYIGFMCFMSAGALL 201 (471)
Q Consensus 126 ~g~g~~~~~~~~~i~~~~~-~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~i~ 201 (471)
++.........+...|.++ +++|.+..+.-.....+|.++.+.+...+....++ .. ++++. ..+..++..+..++
T Consensus 115 ~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~-~~v~~iv~~v~~~i 193 (428)
T PF13347_consen 115 IAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWM-ALVLAIVGLVFFLI 193 (428)
T ss_pred HhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHH-HHHHHHHHHHHhhh
Confidence 8888887778888899987 67999999999888888886555554222211111 11 12221 12222222222222
Q ss_pred HHhccCCCccccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHhHhhhc---ccccccccccc-chhhhH
Q 012075 202 SLVILPPGRVIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNFFYSYQ---FNNVNGLQFNL-RTRGLN 277 (471)
Q Consensus 202 ~~~l~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~s~~---~~~~~~~~~~~-~~~~l~ 277 (471)
..+..++++. +.+ +.+++.+.++.+++. +++|.+..+....+...+.+... ...+..+..+. ...+..
T Consensus 194 ~~~~~ke~~~-~~~----~~~~~~~~~~~~~~~---~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~ 265 (428)
T PF13347_consen 194 TFFFVKERSV-EVT----EQEKKISLRDSLRSL---FRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIF 265 (428)
T ss_pred hhheeeeccc-ccc----ccccccccccchhhh---cccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHH
Confidence 3333232111 100 112233444444433 34454433333333222211100 00111111111 234455
Q ss_pred HHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHH
Q 012075 278 NVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLY 357 (471)
Q Consensus 278 ~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (471)
.....++.+++.++.+++.|| +|||+....+..+........+. . + + .+.+..++..
T Consensus 266 ~~~~~~~~~v~~~~~~~l~~r--~gk~~~~~~~~~~~~~~~~~~~~-----~---~---------~----~~~~~~~i~~ 322 (428)
T PF13347_consen 266 MLIFFVASIVGSPLWGRLSKR--FGKKKVYIIGLLLAALGFLLLFF-----L---G---------P----GSPWLVLILF 322 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--ccceeehhhhHHHHHHHHHHHHH-----H---H---------h----hhHHHHHHHH
Confidence 556788889999999999999 89999887776655322222211 1 0 0 1223456777
Q ss_pred HHHHhhHHHHHHHHHHHHHHhcC------CchhhhHHHHHHHHHHHHHHHHHhhhc
Q 012075 358 FCYGLLDAMFQSMVYWVIGALAD------DSETLSRYSGFYKGVQSAGAAVAWQVD 407 (471)
Q Consensus 358 ~~~g~~~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~~~s~g~~i~~~~~ 407 (471)
++.|++.+..+...+++++|..+ ..|+.+..+|+..+.+.++.+++-.+.
T Consensus 323 ~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~ 378 (428)
T PF13347_consen 323 ILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIV 378 (428)
T ss_pred HHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHH
Confidence 78888888888888888887662 124457788888888877777776543
No 108
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.25 E-value=2.8e-10 Score=111.87 Aligned_cols=274 Identities=14% Similarity=0.147 Sum_probs=152.0
Q ss_pred ccccccchhHHHHHHHHHHhhhhhh---hHhhhhcCCCCCCChhhhhHHHHHHHHH-HHhhhchhhhhhhccchhHHHHH
Q 012075 18 SRFRYNSPLVQVCLIGLVCFCCPGM---FNALSGMGGGGQVDTTAANNANTALYTT-FTIFGILGGGIYNILGPQVTLIS 93 (471)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~f~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~g~l~d~~Grk~~l~i 93 (471)
..+-|+++|..++..++..+....- |..+++..+....+. .....++.+|.. ....++.+-|+.|++|-|.++++
T Consensus 36 ~~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Ygs~-~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ll 114 (480)
T KOG2563|consen 36 GHRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYGSS-SAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLL 114 (480)
T ss_pred ccccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhcch-HHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHH
Confidence 4567889999888888877655321 223332222111111 122344555544 33456888999999999999999
Q ss_pred HHHHHHHHHHHHHhhh-cc----cchH--HHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhh
Q 012075 94 ACSTYVLYAGSFLYYN-HH----KHQA--FAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIG 166 (471)
Q Consensus 94 ~~~~~~~~~~~~~~~~-~~----~~~~--~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG 166 (471)
++..-++. +.+-.. .. +..+ ....+-.+.+.+..+.....+-+.+.++++++|..+..+-.+.+.+|..+|
T Consensus 115 gt~ln~iG--a~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg 192 (480)
T KOG2563|consen 115 GTVLNGIG--AWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVG 192 (480)
T ss_pred HHHHHHHH--HHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHH
Confidence 99987763 322211 11 2334 556677777776666555555566677899999999999988888999998
Q ss_pred hHHHHHhhccCCCccccccchhHHHH---HHHHHHHHHHHhccCCCccccCCCCccccccCCCHHHHHHHHHHHhcchhH
Q 012075 167 GLIPFILNYNRNEAVSVNDGTYIGFM---CFMSAGALLSLVILPPGRVIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKM 243 (471)
Q Consensus 167 ~~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~l~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (471)
.+++-.+..+.++.....|.....+. ++..+.+.+..+.+++++.......+ ..+.+.++. +++.+.++++++
T Consensus 193 ~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~-~~~~~~~f~---~si~~~~~n~~F 268 (480)
T KOG2563|consen 193 FLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQ-AALQDASFP---KSIKSCFKNRQF 268 (480)
T ss_pred hhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhH-hhhhcCcHH---HHHHHHHcCccH
Confidence 88864333222122233344332222 22222222223333221110000000 001122343 445566777776
Q ss_pred HHHHHHHHH-hHhHhhhc--cc-cccccccccchhhhHHHHHHHHHHHHhhhhhhhccc
Q 012075 244 LLIFPASWA-SNFFYSYQ--FN-NVNGLQFNLRTRGLNNVFYWGAQMLGSVGIGYIFDF 298 (471)
Q Consensus 244 ll~~~~~~~-~~~~~s~~--~~-~~~~~~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~ 298 (471)
.++...... .+.+++.. +. .+...+++-...|.......++.++++++.|.+.||
T Consensus 269 ~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dk 327 (480)
T KOG2563|consen 269 IILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADK 327 (480)
T ss_pred HHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhh
Confidence 555433222 23333322 11 111123332456777777788899999999999999
No 109
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.23 E-value=3.4e-09 Score=103.80 Aligned_cols=311 Identities=11% Similarity=0.064 Sum_probs=169.0
Q ss_pred hHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcc-cchHHHHHHHHHHhhhhhHHHhhhhhhh
Q 012075 61 NNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHH-KHQAFAIAAGAILGIGAGLLWAAEGAIM 139 (471)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~-~~~~~li~~r~l~G~g~g~~~~~~~~~i 139 (471)
.++.++--+..++-+++-|.++|+.|+|+-.+-......+...+.+..... .+.+..++.-++..++.....+...+.+
T Consensus 61 gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L 140 (438)
T COG2270 61 GYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSML 140 (438)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHh
Confidence 344444445556667889999999997766555444333322222222212 2345567777888888888888889999
Q ss_pred ccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCcc-------------ccccchhHHHHHHHHHHHHHHHhcc
Q 012075 140 TSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAV-------------SVNDGTYIGFMCFMSAGALLSLVIL 206 (471)
Q Consensus 140 ~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~i~~~~l~ 206 (471)
.+..++++-||..++-|..-.+|+++--++..+.....++++ ...+..+.+..+...+..+-++...
T Consensus 141 ~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v 220 (438)
T COG2270 141 PRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNV 220 (438)
T ss_pred hhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcc
Confidence 999999999999999888888888876666533222111100 0111111111111111111111111
Q ss_pred CCCccccCCCCccccccCCCHHHHHHH---HHHHhc-chhHH-HHHHHHHHh-Hh----Hhhhccccccccccccchhhh
Q 012075 207 PPGRVIRDDGTHCTNIKYSNVSTEITQ---VLKLFS-NWKML-LIFPASWAS-NF----FYSYQFNNVNGLQFNLRTRGL 276 (471)
Q Consensus 207 ~p~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~l-l~~~~~~~~-~~----~~s~~~~~~~~~~~~~~~~~l 276 (471)
++..+-++ +.++..++.+|+ .++..+ ++.+. .+.--+++. +. ..+..|.. ...+++..+..+
T Consensus 221 -~~~~~~~~------~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~-~~~gls~~~lll 292 (438)
T COG2270 221 -HDAEKISS------PPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGA-ADLGLSSTELLL 292 (438)
T ss_pred -cccccccc------cchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHH-HHcCccHHHHHH
Confidence 11110000 111122222222 223322 23222 222222222 22 11111110 012334444556
Q ss_pred HHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHH
Q 012075 277 NNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVL 356 (471)
Q Consensus 277 ~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (471)
..+...+.+++|+++.|++.|| +|-|++...+.+..... .++ ... . . .+ . ..+.+
T Consensus 293 ~g~~~~vvA~lg~ii~g~Ld~r--fg~k~vl~~~lvi~~~~--~~~----~~~---~--------~-~~--~---~f~i~ 347 (438)
T COG2270 293 IGIALSVVAALGAIIAGFLDER--FGSKPVLMIGLVILSIA--ALY----LIF---L--------E-GE--L---DFWIL 347 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--hCCceeehHHHHHHHHH--HHH----HHH---c--------c-cc--H---HHHHH
Confidence 6778899999999999999998 77777777765544211 111 111 1 0 01 1 23556
Q ss_pred HHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhh
Q 012075 357 YFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQ 405 (471)
Q Consensus 357 ~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~ 405 (471)
.++.|++.+..|...-++..++.++.+ -++.+|+|+...-.++..+-+
T Consensus 348 gll~g~s~G~~qA~SRSy~~~lvp~~k-~~~fFglyaltgra~S~~gp~ 395 (438)
T COG2270 348 GLLVGTSLGGAQASSRSYLARLVPKGK-EGRFFGLYALTGRAASFLGPF 395 (438)
T ss_pred HHHHHHhcchHHHHHHHHHHHhCCCcc-ccceeehhhhhhhHHHHHHHH
Confidence 678899999999999999999995443 489999999886555555544
No 110
>PRK09848 glucuronide transporter; Provisional
Probab=99.20 E-value=3.4e-09 Score=109.17 Aligned_cols=312 Identities=10% Similarity=0.052 Sum_probs=154.5
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhcc----chhHHH-HHHHHHHHHHHHHHHh-h-hcccc--hHHHHHHHHHHhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNIL----GPQVTL-ISACSTYVLYAGSFLY-Y-NHHKH--QAFAIAAGAILGI 126 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~----Grk~~l-~i~~~~~~~~~~~~~~-~-~~~~~--~~~li~~r~l~G~ 126 (471)
++...+......-...++..++.|.++||. |||+.. +++.+...+....... . ...++ .+..++.-++.++
T Consensus 42 ~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (448)
T PRK09848 42 GAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGL 121 (448)
T ss_pred CHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHH
Confidence 355556666666777788899999999996 776655 5555433321111111 1 01111 2234555667788
Q ss_pred hhhHHHhhhhhhhccCC-CCCchhhHHHHHHHH-----HHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHH
Q 012075 127 GAGLLWAAEGAIMTSYP-PPNRKGTYISIFWSI-----FNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGAL 200 (471)
Q Consensus 127 g~g~~~~~~~~~i~~~~-~~~~RG~~~g~~~~~-----~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 200 (471)
+.+...+...+...|+. ++++|.+..++-... ..++..++|++..... . .....+..+. .++.+++.+
T Consensus 122 ~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g-~---~~~~~~~~~~--~~~~v~~~~ 195 (448)
T PRK09848 122 CYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSP-E---EMVSVYHFWT--IVLAIAGMV 195 (448)
T ss_pred HHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C---chhhhHHHHH--HHHHHHHHH
Confidence 88877665555556655 457899887765433 2344455555542110 0 0000111111 122222222
Q ss_pred HHH--hccCCCccccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHh---Hhhhccccccccccccc-h-
Q 012075 201 LSL--VILPPGRVIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNF---FYSYQFNNVNGLQFNLR-T- 273 (471)
Q Consensus 201 ~~~--~l~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~---~~s~~~~~~~~~~~~~~-~- 273 (471)
+.+ +...||+.+++ .++++.++.+++ .+++|+++......+.... ......+.+..+.++.. .
T Consensus 196 ~~~~~~~~~~e~~~~~-------~~~~~~~~~~~~---l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 265 (448)
T PRK09848 196 LYFICFKSTRENVVRI-------VAQPSLKISLQT---LKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLF 265 (448)
T ss_pred HHHHHHcCcEeccCCC-------ccCCCHHHHHHH---HhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHH
Confidence 211 11112211111 112234443333 3566665544332222211 11111122222222221 1
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhH
Q 012075 274 RGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGP 353 (471)
Q Consensus 274 ~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (471)
.++......++.+++.++.+++.|| +|+|+...+|..+. .++.... .+ .+ + .+.+..
T Consensus 266 ~~~~~~~~~~~~~~~~~l~~~l~~r--~g~~~~~~~g~~~~-~i~~~~~----~~---~~--------~-----~~~~~~ 322 (448)
T PRK09848 266 TVLVLVQNLVGTVASAPLVPGMVAR--IGKKNTFLIGALLG-TCGYLLF----FW---VS--------V-----WSLPVA 322 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHHH-HHHHHHH----HH---cC--------c-----hhHHHH
Confidence 2222333356677888889999998 78888777665443 1221111 10 01 1 122223
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhcC-C-----chhhhHHHHHHHHHHHHHHHHHhhh
Q 012075 354 FVLYFCYGLLDAMFQSMVYWVIGALAD-D-----SETLSRYSGFYKGVQSAGAAVAWQV 406 (471)
Q Consensus 354 ~~~~~~~g~~~~~~~~~~~~~i~~~~~-~-----~~~~~~~~~~~~~~~s~g~~i~~~~ 406 (471)
.+..++.+++.+...+..+++..+..+ + .|+.+...|++++.+.+|.+++-.+
T Consensus 323 ~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i 381 (448)
T PRK09848 323 LVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSI 381 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 444556777777777777777666542 1 2344788899999888888886443
No 111
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.20 E-value=3.5e-08 Score=96.95 Aligned_cols=317 Identities=13% Similarity=0.077 Sum_probs=172.1
Q ss_pred HHHHHHHHHHhhhchhhhhhhccc-----hhHHHHHHHHHHHHHH---HH--HHhhhc-----ccch--H--HHHHHHHH
Q 012075 63 ANTALYTTFTIFGILGGGIYNILG-----PQVTLISACSTYVLYA---GS--FLYYNH-----HKHQ--A--FAIAAGAI 123 (471)
Q Consensus 63 ~~~~~~~~~~i~~~~~g~l~d~~G-----rk~~l~i~~~~~~~~~---~~--~~~~~~-----~~~~--~--~li~~r~l 123 (471)
..++-|. .+.....+|..+|+.+ ||..+++......... .. .+.... .++. + ....+=.+
T Consensus 20 lval~~~-~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l 98 (403)
T PF03209_consen 20 LVALHYL-VAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLL 98 (403)
T ss_pred HHHHHHH-HHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHH
Confidence 3444444 3556788999999999 9988887764332111 11 111111 0022 2 23445567
Q ss_pred HhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHH
Q 012075 124 LGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSL 203 (471)
Q Consensus 124 ~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 203 (471)
.|+|.+...++--+.++|.+|||+|++..++.|.+..+|.+++.++...+....++ ........... ++.....+++.
T Consensus 99 ~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~-~rL~~v~~~~a-~i~~~l~~ia~ 176 (403)
T PF03209_consen 99 YGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP-ERLIQVIQGVA-LIALLLNLIAL 176 (403)
T ss_pred HHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCH-HHHHHHHHHHH-HHHHHHHHHHH
Confidence 78888888888889999999999999999999999999999998886433322210 10000111111 11111112233
Q ss_pred hccCCCccccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHhHhhhcccccccccc--ccchhhhHHHHH
Q 012075 204 VILPPGRVIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNFFYSYQFNNVNGLQF--NLRTRGLNNVFY 281 (471)
Q Consensus 204 ~l~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~s~~~~~~~~~~~--~~~~~~l~~~~~ 281 (471)
+-.+||..++. +...++++++++.+++.+..-..+|++....+.......+-..+..|-...| +..+....+...
T Consensus 177 wg~E~r~~~~~---~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~ 253 (403)
T PF03209_consen 177 WGQEPRRSRRA---AAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFW 253 (403)
T ss_pred HhcccCCcccc---cCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHH
Confidence 33333332222 1112345567777776654333334332222211111111111222322233 333445556678
Q ss_pred HHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHH
Q 012075 282 WGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYG 361 (471)
Q Consensus 282 ~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 361 (471)
+.+.++|-...|++..| +.++++...+|..+...+ +...+ ... +.+ +.+..-...+++|
T Consensus 254 ~~G~L~G~~~~g~~l~~-~~~~~~~a~~G~~~~~~~-f~lii----~a~------------~~~---~~~~~~~~~~l~G 312 (403)
T PF03209_consen 254 GGGTLLGMLLAGFLLSR-RLGKKRTAALGCLLGALA-FALII----LAG------------PLG---SPWLFRPGVFLLG 312 (403)
T ss_pred HHHHHHHHHHHHHHhcC-CCCchHHHHHHHHHHHHH-HHHHH----HHH------------hcc---cchHHHHHHHHHH
Confidence 88999999899998775 366666555665444222 11111 111 011 1122344556678
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 012075 362 LLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVD 407 (471)
Q Consensus 362 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~ 407 (471)
++.+.+..-.-...=++. .+++.+..+|..-..|+++..++-+.+
T Consensus 313 ~g~G~f~vgals~mM~lt-~~~~aG~~mG~WGaaQA~A~Glg~~~G 357 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLT-SAGRAGLFMGAWGAAQAIARGLGTFLG 357 (403)
T ss_pred HhhhHHHHHHHHHHHhCC-CCcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 887777654433444444 345568889999999988888887765
No 112
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.19 E-value=9.7e-09 Score=103.47 Aligned_cols=321 Identities=11% Similarity=0.040 Sum_probs=169.4
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhc----cchhH-HHHHHHHHHHHHHHHHHhhh-cc--cchHHHHHHHHHHhhhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNI----LGPQV-TLISACSTYVLYAGSFLYYN-HH--KHQAFAIAAGAILGIGA 128 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~Grk~-~l~i~~~~~~~~~~~~~~~~-~~--~~~~~li~~r~l~G~g~ 128 (471)
+...+....+.=..-++.-++.|.++|| +||++ =++.+.+.+.+.....+..- .+ .+....++--++.+++-
T Consensus 47 ~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~Y 126 (467)
T COG2211 47 AALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGY 126 (467)
T ss_pred HHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHH
Confidence 4444333334444556777899999995 78644 45666677766444433311 11 23445677788888888
Q ss_pred hHHHhhhhhhhccCC-CCCchhhHHHHHHHHHHhhhhhhhHHHH-HhhccCCCccccccc-hhHHHHHHHHHHHHHHHhc
Q 012075 129 GLLWAAEGAIMTSYP-PPNRKGTYISIFWSIFNMGGVIGGLIPF-ILNYNRNEAVSVNDG-TYIGFMCFMSAGALLSLVI 205 (471)
Q Consensus 129 g~~~~~~~~~i~~~~-~~~~RG~~~g~~~~~~~~G~~iG~~i~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~l 205 (471)
+.....-.+...|+. +|+||.+..++-+.+.++|..+-..+.. ......+++....+. ..+++.++.++..+.+++-
T Consensus 127 T~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~ 206 (467)
T COG2211 127 TLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFN 206 (467)
T ss_pred HheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 887777777777876 4899999999998888888655444321 111111111111111 1123333333333333433
Q ss_pred cCCCccccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHh--Hh-Hhhhccccccccccccc--hhhhHHHH
Q 012075 206 LPPGRVIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWAS--NF-FYSYQFNNVNGLQFNLR--TRGLNNVF 280 (471)
Q Consensus 206 ~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~--~~-~~s~~~~~~~~~~~~~~--~~~l~~~~ 280 (471)
.+||..++..++ ...+++.++.+.. .+++|.+++...+.++. +. ..+..+..+..+..+.. ...+....
T Consensus 207 v~ER~~~~~~~~---~~~~~~~~~~~~~---~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~ 280 (467)
T COG2211 207 VKERVVETQPTK---TGVKLKLKDSFLL---IFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLA 280 (467)
T ss_pred hhcccCccccCc---ccccccHHHHHHH---HHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHH
Confidence 333322111000 0112233322222 23444333333322222 21 11111111122222221 23455566
Q ss_pred HHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHH
Q 012075 281 YWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCY 360 (471)
Q Consensus 281 ~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (471)
..++.+++.++..++.+| +|||+...++.++..+...+.+ . .+ . .+....++..++.
T Consensus 281 ~~~~~l~~~~~~p~L~~~--~gkk~~~~~~~~~~~i~~~~~~----f----~~-----------~--~~~~l~~~~~~i~ 337 (467)
T COG2211 281 SGAGLLIGLILWPRLVKK--FGKKKLFLIGLLLLAVGYLLLY----F----TP-----------A--GSVVLIVVALIIA 337 (467)
T ss_pred HHHHHHHHHHhHHHHHHH--hchHHHHHHHHHHHHHHHHHHH----h----hc-----------C--cchHHHHHHHHHH
Confidence 777778878888899998 8999988777544322211111 1 11 1 2333455555677
Q ss_pred HhhHHHHHHHHHHHHHHh------cCCchhhhHHHHHHHHHHHHHHHHHhhh
Q 012075 361 GLLDAMFQSMVYWVIGAL------ADDSETLSRYSGFYKGVQSAGAAVAWQV 406 (471)
Q Consensus 361 g~~~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~~~~~s~g~~i~~~~ 406 (471)
+++.+..++..|+++++. .+..|+-+..++...+++=+|.+++-++
T Consensus 338 ~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~ 389 (467)
T COG2211 338 GVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFI 389 (467)
T ss_pred HHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 788888888888876543 3445555777788888876666666543
No 113
>PRK11462 putative transporter; Provisional
Probab=99.19 E-value=1.1e-08 Score=105.78 Aligned_cols=115 Identities=9% Similarity=-0.022 Sum_probs=76.7
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhc----cchhHHHH-HHHHHHHHHHHHHHhhh-cccc--hHHHHHHHHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNI----LGPQVTLI-SACSTYVLYAGSFLYYN-HHKH--QAFAIAAGAILGIG 127 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~Grk~~l~-i~~~~~~~~~~~~~~~~-~~~~--~~~li~~r~l~G~g 127 (471)
++...+....+.-..-++..++.|.++|| +|||+..+ ++.+.+.+.....+... .+++ ...+++.-++..++
T Consensus 43 ~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~ 122 (460)
T PRK11462 43 PAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLL 122 (460)
T ss_pred CHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHH
Confidence 35444444444455567788999999995 79876655 45555554332222211 1111 23456666777788
Q ss_pred hhHHHhhhhhhhccCCC-CCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 128 AGLLWAAEGAIMTSYPP-PNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 128 ~g~~~~~~~~~i~~~~~-~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
.....+.-.+...|+++ +|+|.+.+++.....++|..+++.+.
T Consensus 123 ~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~ 166 (460)
T PRK11462 123 YTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLM 166 (460)
T ss_pred HHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777777778888876 89999999999988888887777664
No 114
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.17 E-value=2.2e-09 Score=104.83 Aligned_cols=233 Identities=12% Similarity=0.114 Sum_probs=134.0
Q ss_pred ccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCc----------
Q 012075 111 HKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEA---------- 180 (471)
Q Consensus 111 ~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~---------- 180 (471)
..+++.++++-++.|.|.+...++...|++++.+++++.+.+++.+.++.+|.++||++...+......+
T Consensus 7 ~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~ 86 (310)
T TIGR01272 7 QRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANA 86 (310)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhH
Confidence 3578899999999999999999999999999999999999999999999999999999975444221000
Q ss_pred --cccccchhHHHHHHHHHHHHHHHhccCCCccccCCCCccccccCCCHHHHHHHHHHHhcchhHHHHH-HHHHHhHh--
Q 012075 181 --VSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIF-PASWASNF-- 255 (471)
Q Consensus 181 --~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-~~~~~~~~-- 255 (471)
..|++ .|++..++..+..+...+...|+.. ++|+++.. +++.. +.+ +.+++|+.++.. .++++.+.
T Consensus 87 ~~~~~~~-~yl~ia~~~~~~~i~~~~~~~p~~~-~~~~~~~~--~~~~~--~~~---~~~~~~~~~l~~~~~f~yvg~e~ 157 (310)
T TIGR01272 87 EAAKVHT-PYLLLAGALAVLAIIFAFLPLPELQ-EADVARVS--SGDTT--QKT---SAFQFTHLVLGALGIFVYVGAEV 157 (310)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHccCCCCC-cccccccc--ccccc--chh---hHHhhHHHHHHHHHHHHHHHHHH
Confidence 11222 2333333333333333333334321 11111100 01100 011 223445544432 23334332
Q ss_pred -Hhhhccccccc----cccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhc
Q 012075 256 -FYSYQFNNVNG----LQFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQL 330 (471)
Q Consensus 256 -~~s~~~~~~~~----~~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~ 330 (471)
..++. +++.. .+++.++.++....+..+.++|+++.+++.|| +|+|+...++..... +.... .. .
T Consensus 158 ~~~~w~-~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r--~g~~~~l~~~~~l~~-~~~~l----~~-~- 227 (310)
T TIGR01272 158 SAGSFL-VNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPM--ISQGRYLAFNAFLAV-LLSIG----AA-L- 227 (310)
T ss_pred HHHHHH-HHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHH-HHHHH----HH-H-
Confidence 11222 33332 12344455666777888999999999999999 787776655543331 11111 10 0
Q ss_pred ccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhc
Q 012075 331 NYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSMVYWVIGALA 379 (471)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 379 (471)
. + +.. .....++.|++.+...|.......+..
T Consensus 228 --~--------~------~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~ 259 (310)
T TIGR01272 228 --T--------H------GYV-AMWFVLALGLFNSIMFPTIFSLALNAL 259 (310)
T ss_pred --c--------C------CHH-HHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 0 0 111 223445678888888888777776766
No 115
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.16 E-value=4e-09 Score=106.51 Aligned_cols=152 Identities=16% Similarity=0.115 Sum_probs=103.2
Q ss_pred cccccchhHHHHHHHHHHhhhhh--------hhHhhhhcCCCCCCChhhhhHHHHHHHHHHHhhhchhhhhhhccch-hH
Q 012075 19 RFRYNSPLVQVCLIGLVCFCCPG--------MFNALSGMGGGGQVDTTAANNANTALYTTFTIFGILGGGIYNILGP-QV 89 (471)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~f~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Gr-k~ 89 (471)
....+.+|..+.+..+..|+... ++.+++.+.-+ .+.+.-+...+..-++.+++++..|..+.|.|. |+
T Consensus 26 ~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~--A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~ 103 (488)
T KOG2325|consen 26 LDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPT--ATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKK 103 (488)
T ss_pred ccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCC--CCcchhhHHHHHHHHHHHhcchhhcccccccCCccc
Confidence 33445555556666666655442 22333432221 223344556666677778888999999999996 77
Q ss_pred HHHHHHHHHHHHHHHHHhhhc-cc-chHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhh
Q 012075 90 TLISACSTYVLYAGSFLYYNH-HK-HQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGG 167 (471)
Q Consensus 90 ~l~i~~~~~~~~~~~~~~~~~-~~-~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~ 167 (471)
.++.|.++..+....++..+. .+ ..+.++++|++.|+|.|... .-=.|+++.+.+++|-|+++.......+|.++||
T Consensus 104 Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a-~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp 182 (488)
T KOG2325|consen 104 PLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFA-VLRAYIADASTVEDRPRAFAATSGGFVLGIILGP 182 (488)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHH-HHHHHHHhccCccchHHHHHHhhhHHHHHHHHhH
Confidence 788888766553322212222 23 57899999999999988754 4567899999999999999999888888888888
Q ss_pred HHHHHh
Q 012075 168 LIPFIL 173 (471)
Q Consensus 168 ~i~~~~ 173 (471)
.+...+
T Consensus 183 ~~q~~f 188 (488)
T KOG2325|consen 183 TIQLAF 188 (488)
T ss_pred HHHHHH
Confidence 886433
No 116
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.10 E-value=1.2e-07 Score=97.59 Aligned_cols=116 Identities=18% Similarity=0.209 Sum_probs=82.0
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhcc-chhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNIL-GPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
++.......+.......++++++|+++||+ |||++++++.+...+....... ...+...++++-.+.++|.|...+.
T Consensus 43 s~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~--~~~~~~~~~l~l~li~iG~G~~~~~ 120 (493)
T PRK15462 43 DDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGA--SEIHPSFLYLSLAIIVCGYGLFKSN 120 (493)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHH--hhcchhHHHHHHHHHHHhccccccc
Confidence 344444445555566677889999999999 9999999999877653222111 0122233444544555666666666
Q ss_pred hhhhhccCCCCC--chhhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 135 EGAIMTSYPPPN--RKGTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 135 ~~~~i~~~~~~~--~RG~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
..++++|..|++ +|++.+++++...++|..++|.+...+
T Consensus 121 ~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L 161 (493)
T PRK15462 121 VSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYA 161 (493)
T ss_pred HHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHH
Confidence 678899998875 799999999999999999999997433
No 117
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.09 E-value=1.7e-09 Score=91.50 Aligned_cols=102 Identities=21% Similarity=0.334 Sum_probs=85.2
Q ss_pred HHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCch
Q 012075 69 TTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRK 148 (471)
Q Consensus 69 ~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~R 148 (471)
.+..+++++.+++.||+|||+.+..+.....+..... ...++.+.+++.+++.|++.+...+....++.|..|+++|
T Consensus 9 ~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 85 (141)
T TIGR00880 9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMF---ALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEER 85 (141)
T ss_pred hHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHH---HHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhh
Confidence 3345677889999999999999998887665433222 2247888899999999999999988899999999999999
Q ss_pred hhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 149 GTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 149 G~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
++.+++.+....+|..+|+.+...+
T Consensus 86 ~~~~~~~~~~~~~g~~~~~~~~~~~ 110 (141)
T TIGR00880 86 GVALGLMSAGIALGPLLGPPLGGVL 110 (141)
T ss_pred hHHHHHHHHhHHHHHHHhHHhHHHH
Confidence 9999999999999999999887433
No 118
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.02 E-value=3.7e-07 Score=92.18 Aligned_cols=315 Identities=14% Similarity=0.013 Sum_probs=151.8
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccc-hhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILG-PQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~G-rk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
++...+...++......++++++|.++||.+ +|+.+.+..++-.+..... ...++.+.+++.-++..+......+.
T Consensus 35 s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~---~~~~~f~~~~~~~~l~~~~~~p~~pl 111 (400)
T PF03825_consen 35 SGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL---AFSSSFWWLFVIMLLFSFFFSPTMPL 111 (400)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH---HHhccHHHHHHHHHHHHHHHccHHHH
Confidence 4555566677777777788899999999987 5666666555433311111 22466777777777766665555555
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccC
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRD 214 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~ 214 (471)
..++..+... ++++-.|-.-..-++|-+++.+..........+.....+..+ +......+.....+ ..|..+.+|+
T Consensus 112 ~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~ll~~~~l-~lp~~~~~~~ 187 (400)
T PF03825_consen 112 SDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFY-IAAILSLLLAGFAL-FLPKTPPKRS 187 (400)
T ss_pred HHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHH-HHHHHHHHHHHHHH-hCCCCccccc
Confidence 5555544433 222222333333344554443321011110000011111222 22222222211222 2332221111
Q ss_pred CCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhH----hHhhhcccccccc-c-cccchhhhHHHHHHHHHHHH
Q 012075 215 DGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASN----FFYSYQFNNVNGL-Q-FNLRTRGLNNVFYWGAQMLG 288 (471)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~----~~~s~~~~~~~~~-~-~~~~~~~l~~~~~~i~~i~g 288 (471)
++++ .++ +..++.++.+++|+++......+..+ .+|++. +.+... + ++....+.......+.+++.
T Consensus 188 ~~~~----~~~---~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~-~~yl~~~gg~~~~~~g~~~~l~~~aEi~~ 259 (400)
T PF03825_consen 188 AKES----VKK---LLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFF-SIYLQELGGYSGSTIGILWALGVVAEIPF 259 (400)
T ss_pred cCCC----ccc---ccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcccchhhHHHHHHHHHHHHHHHH
Confidence 1110 011 11234456788887765444433333 233333 233221 1 22223343333455677777
Q ss_pred hhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhH---HHHHHHHHhhHH
Q 012075 289 SVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGP---FVLYFCYGLLDA 365 (471)
Q Consensus 289 ~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~ 365 (471)
-...+++..| +|-|+.++++.+... +=|. .+.. .. + +.+... .+...+.|...+
T Consensus 260 f~~~~~~~~r--~g~~~ll~~a~~~~~----vR~~-l~a~---~~-----------~--~~~~~~~~~~l~q~lhG~tf~ 316 (400)
T PF03825_consen 260 FFFSGRFLKR--FGIKWLLLLALVAYA----VRWL-LYAY---FS-----------D--PWPFIVALQLLGQLLHGLTFG 316 (400)
T ss_pred HHHHHHHHHh--cCHHHHHHHHHHHHH----HHHH-HHHH---hc-----------C--CcHHHHHHHHHHHhhhhHHHH
Confidence 7777888777 677775555433221 1111 1110 10 1 111111 122345788877
Q ss_pred HHHHHHHHHHHHhcCCchhhhHHHHHHHHHH-HHHHHHHhhhccc
Q 012075 366 MFQSMVYWVIGALADDSETLSRYSGFYKGVQ-SAGAAVAWQVDTH 409 (471)
Q Consensus 366 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-s~g~~i~~~~~~~ 409 (471)
........++.+..++ +.++++.+++.... .+|.+++..++..
T Consensus 317 ~~~~a~~~yi~~~~p~-~~~at~Q~l~~~~~~Glg~~iG~~igG~ 360 (400)
T PF03825_consen 317 LFHAASVRYIDRIAPP-ELRATAQGLYSALSFGLGGAIGSLIGGW 360 (400)
T ss_pred HHHHHHHHHHHHhCCc-cchHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 7777777788888843 34478888888764 6777777766643
No 119
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.01 E-value=1.9e-07 Score=90.34 Aligned_cols=217 Identities=18% Similarity=0.184 Sum_probs=114.8
Q ss_pred HHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh-hhhhhccCCC
Q 012075 66 ALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA-EGAIMTSYPP 144 (471)
Q Consensus 66 ~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~-~~~~i~~~~~ 144 (471)
.-+....+...+.|.++||+|||+..++-++.|.+ +++. -..++++.++++|++.|++.+.+..+ +.=++.|.-.
T Consensus 77 ~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~---scl~-k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~ 152 (354)
T PF05631_consen 77 AGFASSAIFGTFVGSLADRYGRKKACLLFCILYSL---SCLT-KHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNK 152 (354)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH---HHHH-HhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444556667899999999999999999988865 3343 33688999999999999999998765 4445566521
Q ss_pred CCc-hhhHHHHHHHHH----HhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCCCCcc
Q 012075 145 PNR-KGTYISIFWSIF----NMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDDGTHC 219 (471)
Q Consensus 145 ~~~-RG~~~g~~~~~~----~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~~~~~ 219 (471)
... +......|+.+. .+-.+++++++....... +..+-..|...+.+.+++.++.....++. .. |.
T Consensus 153 ~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~---~~g~vaPF~~a~~~l~~~~~~I~~~W~EN-yg--~~--- 223 (354)
T PF05631_consen 153 RGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWF---GFGPVAPFDAAIVLLAVAAVLILKTWPEN-YG--DT--- 223 (354)
T ss_pred cCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHh---CCCCcchHHHHHHHHHHHHHHHHhccccc-CC--Cc---
Confidence 111 112223333222 112233333432221111 11122234333333333333322222221 11 10
Q ss_pred ccccCCCHHHHHHHHHHHh-cchhHHHHHHHHHHh-HhHhhhcc---ccccccccccchhhhHHHHHHHHHHHHhhhhhh
Q 012075 220 TNIKYSNVSTEITQVLKLF-SNWKMLLIFPASWAS-NFFYSYQF---NNVNGLQFNLRTRGLNNVFYWGAQMLGSVGIGY 294 (471)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~-~~~~~ll~~~~~~~~-~~~~s~~~---~~~~~~~~~~~~~~l~~~~~~i~~i~g~~~~g~ 294 (471)
.++.+..+.+++.++.+ .|||++++..+.... +-+|.+.+ |...... ..-.-|+++..+.+..++|+.+..+
T Consensus 224 --~~~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~-~~~P~GlIFssFM~a~MlGS~lf~~ 300 (354)
T PF05631_consen 224 --SSSSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDD-EELPLGLIFSSFMVAMMLGSSLFSR 300 (354)
T ss_pred --ccccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCCC-CCCCchHHHHHHHHHHHHHHHHHHH
Confidence 01223344445444444 578988777655443 22333332 2222110 0112467777888999999988876
Q ss_pred hccc
Q 012075 295 IFDF 298 (471)
Q Consensus 295 l~D~ 298 (471)
+..+
T Consensus 301 l~s~ 304 (354)
T PF05631_consen 301 LLSK 304 (354)
T ss_pred HHhC
Confidence 6544
No 120
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.99 E-value=3.7e-08 Score=100.70 Aligned_cols=362 Identities=12% Similarity=0.090 Sum_probs=176.4
Q ss_pred hchhhhhhhcc-----chhHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCC--CCC
Q 012075 75 GILGGGIYNIL-----GPQVTLISACSTYVLYAGSFLYY-NHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYP--PPN 146 (471)
Q Consensus 75 ~~~~g~l~d~~-----Grk~~l~i~~~~~~~~~~~~~~~-~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~--~~~ 146 (471)
.++.|.++|.+ .||+=++++.++-.+........ +...+.....+.-++.-+|.+..-++.-+.+.|.. +|+
T Consensus 41 Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~ 120 (433)
T PF03092_consen 41 KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARREPE 120 (433)
T ss_pred hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc
Confidence 47899999986 35555666665543322222211 11234556666777888888888888888888887 355
Q ss_pred chhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCCCCc-ccccc--
Q 012075 147 RKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDDGTH-CTNIK-- 223 (471)
Q Consensus 147 ~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~~~~-~~~~~-- 223 (471)
.||...+..+....+|.++|..++...... .+.++ .+.+...+..+..+..+++.++++.+++++.. ...++
T Consensus 121 ~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~----~~~~~-~f~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 195 (433)
T PF03092_consen 121 SRGDLQSFVWGVRSVGSLVGSLLSGPLLDS----FGPQG-VFLISAALPLLMLIVALFLLEERKVRPADEVFSFGKEEVP 195 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhhc----CCCeE-EehHHHHHHHHHHHHHHHhhhhccccccchhhcccccccc
Confidence 699999999999999999998886333221 12233 34444445555544555555543222111110 00010
Q ss_pred --CCCHHHHHHHHHHHhcchhHHHHHH-HHHHhHhHhhhccc-c--cc-----ccccccchhhhHHHHHHHHHHHHhhhh
Q 012075 224 --YSNVSTEITQVLKLFSNWKMLLIFP-ASWASNFFYSYQFN-N--VN-----GLQFNLRTRGLNNVFYWGAQMLGSVGI 292 (471)
Q Consensus 224 --~~~~~~~~~~~~~~~~~~~~ll~~~-~~~~~~~~~s~~~~-~--~~-----~~~~~~~~~~l~~~~~~i~~i~g~~~~ 292 (471)
....++..++.++.+++|.++-... ..+.........-. . +. ..+|+....+...++..++.++|..+.
T Consensus 196 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y 275 (433)
T PF03092_consen 196 CLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLY 275 (433)
T ss_pred hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1114566777777777766543332 12211111110000 0 00 112333334444566677777777766
Q ss_pred hhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHHHH
Q 012075 293 GYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSMVY 372 (471)
Q Consensus 293 g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 372 (471)
.++..+ +.-|+...+..++. ......-..+...++. ..+..+ .-+ .+.-.++..+....-.-+..
T Consensus 276 ~~~~~~--~~~R~~~~~t~~~~----~~~~l~~~~lv~~~n~-----~~Gi~d--~~f--~lgd~~l~~~~~~i~~mP~l 340 (433)
T PF03092_consen 276 RKYFSN--WSWRRIFVVTTLVS----VLASLFDLLLVTRWNL-----DLGIPD--QWF--ALGDTILEEVIGMIAFMPSL 340 (433)
T ss_pred HHHHhC--CCHHHHHHHHHHHH----HHHhcccEEEEEEEee-----eeCcCC--eEE--EEEhHHHHHHHHHHHHHHHH
Confidence 654433 23333332222211 1110000000111110 000011 111 11122222333222222334
Q ss_pred HHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccCchhhH----HH-HHHHHHHHh--hhhhhhheeeeeeccCCCc
Q 012075 373 WVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTHKVSLLS----QL-VVNWSLTTI--SYPLLVILVLLAVKDEKSP 445 (471)
Q Consensus 373 ~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~~~p~~~----~~-~~~~~~~~~--~~~~~i~~~~~~~pet~~~ 445 (471)
.++.++.++-.| ++.+++...+.++|..++-.++.....+.+ .+ .+.+.+.+. ..++.++++ ..+||.++.
T Consensus 341 vl~a~lcP~G~E-gt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll-~lLp~~~~~ 418 (433)
T PF03092_consen 341 VLAARLCPKGSE-GTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLL-FLLPPQKRI 418 (433)
T ss_pred HHHHHHCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHH-HHcCCCchh
Confidence 467888854444 889999999999999988877643211100 11 133333332 224445544 345666555
Q ss_pred cCccccccCcCCC
Q 012075 446 EESTNSKEVTLPA 458 (471)
Q Consensus 446 ~~~~~~~~~~~~~ 458 (471)
.|++..+++..|+
T Consensus 419 ~~~~~~~~~~~~~ 431 (433)
T PF03092_consen 419 TDELDADGKASKK 431 (433)
T ss_pred hHHHhhcCCcccC
Confidence 5555444444443
No 121
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.96 E-value=2.7e-08 Score=103.69 Aligned_cols=108 Identities=8% Similarity=0.021 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhcc
Q 012075 62 NANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTS 141 (471)
Q Consensus 62 ~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~ 141 (471)
........+..++++++|+++||+|||+.++++.+...+.....+....+++...++++|++.|++.+..+.....++.|
T Consensus 290 ~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~ 369 (490)
T PRK10642 290 LIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPA 369 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455566778899999999999999988876543322221111123567778889999998887777777788889
Q ss_pred CCCCCchhhHHHH-HHHHHHhhhhhhhHHH
Q 012075 142 YPPPNRKGTYISI-FWSIFNMGGVIGGLIP 170 (471)
Q Consensus 142 ~~~~~~RG~~~g~-~~~~~~~G~~iG~~i~ 170 (471)
++|++.||+.+|+ ++... .+..++|.+.
T Consensus 370 ~~p~~~Rg~~~g~~~~~~~-~~g~~~p~i~ 398 (490)
T PRK10642 370 MFPTHIRYSALAAAFNISV-LVAGLTPTLA 398 (490)
T ss_pred HCCCccchHHHHHHHHHHH-HHHHHHHHHH
Confidence 9999999999997 44444 4445555553
No 122
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.94 E-value=1.2e-07 Score=91.23 Aligned_cols=288 Identities=13% Similarity=0.115 Sum_probs=168.8
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
.+....+..+++-..++++.+++.+++.+|+|.++.+..+.++.++ +..+-. ..+.+.++.+-.+.|.|.+...+.
T Consensus 44 ls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~--G~~iR~--~~~~~~L~~gt~l~G~gIav~nVL 119 (395)
T COG2807 44 LSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAA--GILIRS--LGGLPLLFLGTLLAGAGIAVINVL 119 (395)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHH--HHHHHh--cccHHHHHHHHHHHHhhHHHHHHh
Confidence 3455566667777888999999999999999999999999986554 333321 246788999999999999999999
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccC
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRD 214 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~ 214 (471)
-|..+-+. .||+-|..+|+|......|..+++.+.--+..+. .+|+....+ ......+. .+...| ... |+
T Consensus 120 LPslIK~~-Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~---~gW~~aL~~-WAl~allA---l~~WlP-q~~-r~ 189 (395)
T COG2807 120 LPSLIKRD-FPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHS---GGWRGALGF-WALLALLA---LLIWLP-QAL-RE 189 (395)
T ss_pred hhHHHHhh-cccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh---ccHHHHHHH-HHHHHHHH---HHHHhh-hcc-cc
Confidence 99999887 4678899999999999999999887763332221 234433211 11122222 222223 211 11
Q ss_pred CCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhHh-Hhhh--cccccc-ccccccchhhhHHHHHHHHHHHHhh
Q 012075 215 DGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASNF-FYSY--QFNNVN-GLQFNLRTRGLNNVFYWGAQMLGSV 290 (471)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~-~~s~--~~~~~~-~~~~~~~~~~l~~~~~~i~~i~g~~ 290 (471)
.... .+.+. ++..+.+++|..+.+...+-.+.. +|+. .++.+. +.+++..+.+.......+.++..++
T Consensus 190 ~~~~---~~~~~-----~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~l 261 (395)
T COG2807 190 QAAS---IATKL-----VSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTAL 261 (395)
T ss_pred cccc---ccccc-----ccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHH
Confidence 1000 00000 111123456655555443333332 2221 124443 4566666666555566777778777
Q ss_pred hhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHH
Q 012075 291 GIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSM 370 (471)
Q Consensus 291 ~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 370 (471)
....+.+|. -.||+........+ .++.+ + +.+ .+ .+ . +..-.++.|++.+...+.
T Consensus 262 l~P~la~R~-~n~r~~~~~~~~~~-l~G~~--G--~~~---~P----------~~---~---~~lw~~llG~G~G~~F~l 316 (395)
T COG2807 262 LIPLLARRS-KNQRPLVVLALLLM-LVGLV--G--LLL---AP----------GQ---L---PILWALLLGLGQGGAFPL 316 (395)
T ss_pred HHHHHHHHh-cccchHHHHHHHHH-HHHHH--H--HHH---hh----------hh---H---HHHHHHHHhCccchHHHH
Confidence 777777763 35666443322222 11111 1 111 11 11 1 122246788888888787
Q ss_pred HHHHHHHhcCCchhhhHHH
Q 012075 371 VYWVIGALADDSETLSRYS 389 (471)
Q Consensus 371 ~~~~i~~~~~~~~~~~~~~ 389 (471)
.-.++..-..|+++.++-.
T Consensus 317 aL~li~~rs~~a~~Aa~LS 335 (395)
T COG2807 317 ALTLILLRSSDAAIAAALS 335 (395)
T ss_pred HHHHHHhhcCChHHHHHHH
Confidence 7777888777776544333
No 123
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.93 E-value=8.7e-09 Score=111.06 Aligned_cols=102 Identities=14% Similarity=0.094 Sum_probs=85.0
Q ss_pred HHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCC
Q 012075 67 LYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPN 146 (471)
Q Consensus 67 ~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~ 146 (471)
..++..++++++++++||+|||++++++.++..+..... ...++.+.+++.+++.|++.+..+++..++++|+.|++
T Consensus 604 ~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~---~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~ 680 (742)
T TIGR01299 604 GTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFL---SFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSD 680 (742)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH---HHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 335556778999999999999999998887766533222 22456677888899999988888998999999999999
Q ss_pred chhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 147 RKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 147 ~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
+||+++|+..+...+|.++||.+..
T Consensus 681 ~Rgta~Gi~~~~~rlGaiigp~i~g 705 (742)
T TIGR01299 681 KRATAFGFLNALCKAAAVLGILIFG 705 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999873
No 124
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.93 E-value=1.3e-08 Score=103.90 Aligned_cols=109 Identities=11% Similarity=0.101 Sum_probs=84.8
Q ss_pred hHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhccc---chHHHHHHHHHHhhhhhHHHhhhhh
Q 012075 61 NNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHK---HQAFAIAAGAILGIGAGLLWAAEGA 137 (471)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~---~~~~li~~r~l~G~g~g~~~~~~~~ 137 (471)
....++......++.++.++++||+|||+.+.++.++..+....... . .+ +.+.+++.+++.|++.+...+....
T Consensus 254 g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~-~-~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~ 331 (418)
T TIGR00889 254 SIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAY-G-DPEYFGYALLFLSMIVYGCAFDFFNISGSV 331 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-c-CcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444555667789999999999999999999876653222221 1 12 2456788999999999988888889
Q ss_pred hhccCCCCCchhhHHHHHH-HHHHhhhhhhhHHHH
Q 012075 138 IMTSYPPPNRKGTYISIFW-SIFNMGGVIGGLIPF 171 (471)
Q Consensus 138 ~i~~~~~~~~RG~~~g~~~-~~~~~G~~iG~~i~~ 171 (471)
++.|..|+++||+..|+++ ....+|..+||.++.
T Consensus 332 ~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G 366 (418)
T TIGR00889 332 FVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSG 366 (418)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9999999999999999997 668899999999873
No 125
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.86 E-value=1.9e-07 Score=93.25 Aligned_cols=293 Identities=15% Similarity=0.008 Sum_probs=130.3
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccch-HHHHHHHHHHhhhhhH----H
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQ-AFAIAAGAILGIGAGL----L 131 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~-~~li~~r~l~G~g~g~----~ 131 (471)
+...+...+.......+.+++.|.++||+|.|+-++....+..+..+.+......+-. .-++.+-++.|+..+. .
T Consensus 42 ~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~ 121 (412)
T PF01306_consen 42 GTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAG 121 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 4444444454444445556788999999997666554433222222222211101100 1123333444444333 3
Q ss_pred HhhhhhhhccCCC----CCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccC
Q 012075 132 WAAEGAIMTSYPP----PNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILP 207 (471)
Q Consensus 132 ~~~~~~~i~~~~~----~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~ 207 (471)
.+..-+|+.+.+. +--|.|.-| ++|..++..++..+...+ ....+++......+..++.++.+|
T Consensus 122 ~~~~Ea~~er~sr~~~feYG~~R~wG------Sig~ai~s~~~G~L~~i~------p~~~fwi~s~~~~il~lll~~~~~ 189 (412)
T PF01306_consen 122 VPLSEAYAERVSRRNGFEYGRARMWG------SIGFAIASLLAGILFNIN------PNIIFWIASAAAIILLLLLLLLKP 189 (412)
T ss_dssp HHHHHHHHHHHHHHHSS-HHHHHHHH------HHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHSS--
T ss_pred chHHHHHHHHHHHHhcCCcchHHHHh------hHHHHHHHHHhheeeeeC------ccHHHHHHHHHHHHHHHHHHHcCC
Confidence 3333444433321 111334433 455556655542221110 112233333333333333344443
Q ss_pred CCccc-cCCCCccccccCCCHHHHHHHHHHHhcchhHHHHHHHHHHhH-hHh--hhcccccccccccc-----chhhhHH
Q 012075 208 PGRVI-RDDGTHCTNIKYSNVSTEITQVLKLFSNWKMLLIFPASWASN-FFY--SYQFNNVNGLQFNL-----RTRGLNN 278 (471)
Q Consensus 208 p~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~~~--s~~~~~~~~~~~~~-----~~~~l~~ 278 (471)
++..+ +.++++ ..+++ +..+++..+.+++|+++.+........ .+. ..+++.+....++. ...++..
T Consensus 190 ~~~~~~~~~~~~--~~~~~--~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~ 265 (412)
T PF01306_consen 190 DVPPQAEVADAL--GAKKD--KVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLW 265 (412)
T ss_dssp -SSSSS-SSTTS--SS--------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHH
T ss_pred cCchhhhhhccc--ccCCC--CCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHH
Confidence 22111 111110 01111 113466777889998876665444332 111 11223332222222 1234444
Q ss_pred HHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHH
Q 012075 279 VFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYF 358 (471)
Q Consensus 279 ~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (471)
...-+.+++.-.+..++.+| +|-|+.++++..++. +=... .. +. ++.+.+.++-.
T Consensus 266 s~~v~~E~~~m~~~p~li~r--ig~k~~Lllag~i~~-iRi~~----~~---------------~~---~~~~~i~~~kl 320 (412)
T PF01306_consen 266 SVQVFLEALMMFFSPWLINR--IGAKNLLLLAGVIMA-IRIIG----SG---------------FA---TNPWVISLIKL 320 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--H-HHHHHHHHHHHHH-HHHHH----HH---------------T-----SHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh--cChHhHHHHHHHHHH-HHHHH----Hh---------------hh---cchHHHHHHHH
Confidence 45566677777777788888 888887776655442 11111 11 11 12234566777
Q ss_pred HHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHH
Q 012075 359 CYGLLDAMFQSMVYWVIGALADDSETLSRYSGF 391 (471)
Q Consensus 359 ~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 391 (471)
+.++-.+.......-++.+.++ +|-.++...+
T Consensus 321 LH~~e~~l~lva~fkYI~~~fd-~rlsAt~y~v 352 (412)
T PF01306_consen 321 LHALEFPLLLVAAFKYITAHFD-KRLSATLYLV 352 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS--GGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-HhHHHHHHHH
Confidence 7787777776666778999993 4433444433
No 126
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.83 E-value=1.4e-07 Score=95.33 Aligned_cols=107 Identities=13% Similarity=0.093 Sum_probs=80.1
Q ss_pred hHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhc
Q 012075 61 NNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMT 140 (471)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~ 140 (471)
+...+.......++.+++|+++||+|||+.+..+.+...+..... ...++.+.+++.+++.+++.+........+..
T Consensus 255 g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~ 331 (393)
T PRK15011 255 GVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGM---LMAHSPAILLGLQLLNAIYIGILGGIGMLYFQ 331 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444445555678999999999999998887765443322111 12466777888999999988887777777888
Q ss_pred cCCCCCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 141 SYPPPNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 141 ~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
|..| ++||+++++++...++|..+|+.++.
T Consensus 332 ~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G 361 (393)
T PRK15011 332 DLMP-GQAGSATTLYTNTSRVGWIIAGSLAG 361 (393)
T ss_pred HhCC-CCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 8876 46999999999999999999999873
No 127
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.78 E-value=1.5e-07 Score=95.14 Aligned_cols=104 Identities=20% Similarity=0.217 Sum_probs=81.7
Q ss_pred HHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCC
Q 012075 64 NTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYP 143 (471)
Q Consensus 64 ~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~ 143 (471)
.+....+..++.++.+++.||+|||+.+.++.++..+..... ...++.+.+++.+++.|++.+...+.......|..
T Consensus 255 ~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~ 331 (399)
T PRK05122 255 LTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLL---WLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRV 331 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH---HHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhC
Confidence 334445556677899999999999999888876554432222 22467777888999999999988877777778888
Q ss_pred CCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 144 PPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 144 ~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
|+++||+.+|++.....+|..+++.+.
T Consensus 332 ~~~~~g~~~g~~~~~~~~g~~~~~~~~ 358 (399)
T PRK05122 332 PPQNRGAALGAYSVFLDLSLGITGPLA 358 (399)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988887765
No 128
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.78 E-value=1.2e-07 Score=96.12 Aligned_cols=110 Identities=15% Similarity=0.101 Sum_probs=85.0
Q ss_pred hhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhh
Q 012075 59 AANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAI 138 (471)
Q Consensus 59 ~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~ 138 (471)
..+...+....+..++.++.|++.||+|||+.+.++.+...+..... ...++.+.+++..++.|++.+...+...++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 332 (406)
T PRK11551 256 QAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAAL---AAAPSFAGMLLAGFAAGLFVVGGQSVLYAL 332 (406)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH---HhcCcHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 33444555556667888999999999999999888655443322222 224567777788888898887777777888
Q ss_pred hccCCCCCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 139 MTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 139 i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
..|..|+++||+..|++.....+|..+||.+..
T Consensus 333 ~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g 365 (406)
T PRK11551 333 APLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAG 365 (406)
T ss_pred HHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHh
Confidence 899999999999999999999999999999873
No 129
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.75 E-value=7e-08 Score=98.49 Aligned_cols=107 Identities=11% Similarity=-0.023 Sum_probs=84.0
Q ss_pred hHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhc
Q 012075 61 NNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMT 140 (471)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~ 140 (471)
+...++......++.+++|++.||+|||+.+.++.+++.+..... ..+++.+.+++.+++.|++.+...+....++.
T Consensus 265 g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~---~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 341 (420)
T PRK09528 265 GYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGS---GFATGPLEVSILKLLHAFEVPFLLVGVFKYIT 341 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHH---HhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455566788999999999999999988887666533222 23578888899999999999988777778889
Q ss_pred cCCCCCchhhHHHH-HHHHHHhhhhhhhHHH
Q 012075 141 SYPPPNRKGTYISI-FWSIFNMGGVIGGLIP 170 (471)
Q Consensus 141 ~~~~~~~RG~~~g~-~~~~~~~G~~iG~~i~ 170 (471)
|..|++.|+...+. ++....+|..+|+.+.
T Consensus 342 ~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~ 372 (420)
T PRK09528 342 LNFDVRLSATIYLVGFQFAKQLGAVFLSTLA 372 (420)
T ss_pred HHcCccceeeeeeehHHHHHHHHHHHHHHHH
Confidence 98899999987655 6777889999998886
No 130
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.75 E-value=9.9e-08 Score=96.66 Aligned_cols=128 Identities=18% Similarity=0.141 Sum_probs=92.2
Q ss_pred HHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCch
Q 012075 69 TTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRK 148 (471)
Q Consensus 69 ~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~R 148 (471)
....++.+..++++||+|||+.+.++.+...+..... ...++.+.+++.+++.|++.+...+...+++.+..|+++|
T Consensus 269 l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 345 (408)
T PRK09874 269 VAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPM---SFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIA 345 (408)
T ss_pred HHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH---HHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccc
Confidence 3444566788999999999999998877654432222 2246778888999999999999888888888888899999
Q ss_pred hhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHh
Q 012075 149 GTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLV 204 (471)
Q Consensus 149 G~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 204 (471)
|+.++++.....+|..+||.+...+... .++++ .|++..++.+++.++..+
T Consensus 346 g~~~~~~~~~~~~g~~~gp~~~G~l~~~----~g~~~-~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 346 GRIFSYNQSFRDIGNVTGPLMGAAISAN----YGFRA-VFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred eeeehHHHHHHHHHHHhhHHHHHHHHhh----cchhH-HHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987433221 12332 344444444544444443
No 131
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.74 E-value=3.2e-07 Score=93.48 Aligned_cols=109 Identities=13% Similarity=0.095 Sum_probs=83.8
Q ss_pred hhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhh
Q 012075 60 ANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIM 139 (471)
Q Consensus 60 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i 139 (471)
.+...+....+..++.++.+++.||.++|+.+..+.++..+..... ...++.+.+.++.++.|++.+...+...+++
T Consensus 261 ~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 337 (417)
T PRK10489 261 IGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLF---GLMPMWILAVLCLALFGYLSAISSLLQYTLL 337 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHH---HccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444455566777889999999888888887776554432222 2346677778889999999988777777888
Q ss_pred ccCCCCCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 140 TSYPPPNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 140 ~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
.|..|++.||+.+|++....++|..+|+.+..
T Consensus 338 ~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G 369 (417)
T PRK10489 338 QTQTPDEMLGRINGLWTAQNVTGDAIGAALLG 369 (417)
T ss_pred HhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHH
Confidence 99999999999999999999999999999873
No 132
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.74 E-value=1.8e-07 Score=92.05 Aligned_cols=114 Identities=22% Similarity=0.266 Sum_probs=93.0
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhH-HHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQV-TLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~-~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
+...+...+....+..++.++.+++.||+|||+ .+.++.+...+...... ..++.+.+++..++.|++.+..++..
T Consensus 210 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~ 286 (352)
T cd06174 210 AAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLA---LAPSLALLLVALLLLGFGLGFAFPAL 286 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHHHHhccchhH
Confidence 333444455556667778899999999999999 88888877665333222 24668889999999999999999999
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
..++.|..|+++||+.++++.....+|..+++.+...+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l 324 (352)
T cd06174 287 LTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLL 324 (352)
T ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987433
No 133
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.72 E-value=3.6e-07 Score=92.04 Aligned_cols=128 Identities=8% Similarity=-0.055 Sum_probs=93.7
Q ss_pred hHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhc
Q 012075 61 NNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMT 140 (471)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~ 140 (471)
+...+.......++.++++.+.||+|+|+.+.++.+...+..... ..+++.+.+++..+++|++.+..+++...|+.
T Consensus 243 g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~ 319 (382)
T TIGR00902 243 GLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAII---GAIEAFPLIFLLQILHCGTFAVCHLAAMRYIA 319 (382)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHH---HhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444445556789999999999999999988766532222 33678899999999999999999999999999
Q ss_pred cCCCCCchhhHHHHHH-HHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHH
Q 012075 141 SYPPPNRKGTYISIFW-SIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAG 198 (471)
Q Consensus 141 ~~~~~~~RG~~~g~~~-~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (471)
+. |+++|++..++++ ....+|..+|+.++ |...+. .....|....++.+++
T Consensus 320 ~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~-G~l~~~-----~g~~~~~~~~~~~~~~ 371 (382)
T TIGR00902 320 AQ-PGSEIAKLQALYNALAMGGLIAIFTAFA-GFIYPT-----LGAGTFVFMAIIAAAA 371 (382)
T ss_pred hC-CHhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHh-----ccHHHHHHHHHHHHHH
Confidence 88 9999999999987 46778999999998 333321 1234455554444444
No 134
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.68 E-value=5.3e-07 Score=90.11 Aligned_cols=98 Identities=15% Similarity=0.138 Sum_probs=75.7
Q ss_pred HHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchh
Q 012075 70 TFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKG 149 (471)
Q Consensus 70 ~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG 149 (471)
...++.++.+++.||+|||+.+.++.+...+...... ..++.+.+++.+++.|++.+...+....+..|..| ++|+
T Consensus 247 ~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~-~~~~ 322 (375)
T TIGR00899 247 LEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLA---ADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMP-GRAG 322 (375)
T ss_pred HHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-chhh
Confidence 3445668899999999999998887765433222211 23567778889999999999887777788888865 4677
Q ss_pred hHHHHHHHHHHhhhhhhhHHHH
Q 012075 150 TYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 150 ~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
+.+++++...++|..+|+.+..
T Consensus 323 ~~~~~~~~~~~~g~~~g~~~~g 344 (375)
T TIGR00899 323 AATTLYTNTGRVGWIIAGSVGG 344 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998873
No 135
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.64 E-value=2.7e-07 Score=91.84 Aligned_cols=108 Identities=14% Similarity=0.102 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhccc--chHHHHHHHHHHhhhhhHHHhhhhhh
Q 012075 61 NNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHK--HQAFAIAAGAILGIGAGLLWAAEGAI 138 (471)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~--~~~~li~~r~l~G~g~g~~~~~~~~~ 138 (471)
....+.......+++++.|++.||+|||+.+.++.+...+....... .+ +...+++..++.|++.+...+..+.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~ 319 (377)
T TIGR00890 243 VLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLF---IPMLNDVLFLATVALVFFTWGGTISLFPSL 319 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH---cccchhHHHHHHHHHHHHHhccchhccHHH
Confidence 33444555566778899999999999999998887766553322222 22 23345567888898888877777888
Q ss_pred hccCCCCCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 139 MTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 139 i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
+.|..|+++||+..|++.....+|..+||.+..
T Consensus 320 ~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g 352 (377)
T TIGR00890 320 VSDIFGPANSAANYGFLYTAKAVAGIFGGLIAS 352 (377)
T ss_pred HHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998863
No 136
>PRK12382 putative transporter; Provisional
Probab=98.59 E-value=8.5e-07 Score=89.54 Aligned_cols=101 Identities=17% Similarity=0.164 Sum_probs=81.7
Q ss_pred HHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCc
Q 012075 68 YTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNR 147 (471)
Q Consensus 68 ~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~ 147 (471)
.....+++++.+++.||+|||+.+.++..+..+..... ...++.+.++++.++.|++.+...+.....+.|..|+++
T Consensus 259 ~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 335 (392)
T PRK12382 259 GGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLL---WLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV 335 (392)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHH---HHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH
Confidence 33445677899999999999999988877655432222 224677788889999999999887777778888889999
Q ss_pred hhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 148 KGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 148 RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
||+..|+++....+|..+|+.+..
T Consensus 336 ~g~~~g~~~~~~~~g~~ig~~~~g 359 (392)
T PRK12382 336 RGTALGGYAAFQDIAYGVSGPLAG 359 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998863
No 137
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.57 E-value=6.4e-06 Score=84.29 Aligned_cols=295 Identities=15% Similarity=0.113 Sum_probs=150.1
Q ss_pred HhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhH--HHhhhhhhhccCCCCCchh
Q 012075 72 TIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGL--LWAAEGAIMTSYPPPNRKG 149 (471)
Q Consensus 72 ~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~--~~~~~~~~i~~~~~~~~RG 149 (471)
.+.+.+.|.++|++|||..+.+..+...+......+ +.+|.++ +.|+..+. .+...-+|++|++..++|.
T Consensus 76 ~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~----~~~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~ 147 (463)
T KOG2816|consen 76 LISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLF----QGYWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERS 147 (463)
T ss_pred HHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHH----HHHHHhh----hcccccchhhhhhhhhhheeeccchhHHH
Confidence 345678999999999999999999876554333332 2344444 55554444 3556788999999999999
Q ss_pred hHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCccccCCC--Ccccccc----
Q 012075 150 TYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGRVIRDDG--THCTNIK---- 223 (471)
Q Consensus 150 ~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~~~r~~~--~~~~~~~---- 223 (471)
...|+....+..+..+||..+....... +. ...+.+..+...+..+...+..|++..+++++ .......
T Consensus 148 ~~~gll~~~~~~~~~~~p~~~~~~~~~~----~~-a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~ 222 (463)
T KOG2816|consen 148 SSIGLLSGTFGAGLVIGPALGGYLVKFL----GI-ALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLD 222 (463)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhc----Cc-hHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCccc
Confidence 9999999999999999999874443211 11 12233344444555555555555433222111 1100000
Q ss_pred CCCHHHHHHHHHHHhcchhHHHHHHHHHHhHhHhhhc----ccccccc--ccccchhhhHHHHHHHHHHHHhhhhhhhcc
Q 012075 224 YSNVSTEITQVLKLFSNWKMLLIFPASWASNFFYSYQ----FNNVNGL--QFNLRTRGLNNVFYWGAQMLGSVGIGYIFD 297 (471)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~s~~----~~~~~~~--~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D 297 (471)
+....+.++...+.-.+|..+.+....++.-+.-... ...+... +++.++.+......++...++..+...+..
T Consensus 223 ~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~ 302 (463)
T KOG2816|consen 223 SSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLS 302 (463)
T ss_pred chhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111112222222123444444444444333211111 0112222 334444443333344555555554443332
Q ss_pred cCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHH
Q 012075 298 FSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMFQSMVYWVIGA 377 (471)
Q Consensus 298 ~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 377 (471)
+. .|-|+....|.... .+....++ + .|.. +..+. ............+...+..+.
T Consensus 303 ~~-l~~~~~i~lGl~~~-~~~~~~~a--f---------------~~~~-----w~~~~-~~v~~~~~~~~~pa~~s~~s~ 357 (463)
T KOG2816|consen 303 SI-LGEKRLISLGLLSE-FLQLLLFA--F---------------ATET-----WMMFA-AGVVVALAGIVFPAIRAFASI 357 (463)
T ss_pred HH-HhhhhHhhHHHHHH-HHHHHHHH--H---------------hccc-----hhhhH-HHHHHHhhcchhHHHHhHHHh
Confidence 32 45555555554333 22222222 1 1111 11111 112233333444445555666
Q ss_pred hcCCchhhhHHHHHHHHHHHHHHHHHhh
Q 012075 378 LADDSETLSRYSGFYKGVQSAGAAVAWQ 405 (471)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~s~g~~i~~~ 405 (471)
+. +++++++++++...+++++..++-.
T Consensus 358 ~v-~~~e~g~v~~~is~i~~l~~~~~~~ 384 (463)
T KOG2816|consen 358 LV-SPEEQGKVFGIISGIEGLSGVVSPA 384 (463)
T ss_pred hc-ccccccchhhHHHHHHHHhhhhhHH
Confidence 55 3456689999988888777766654
No 138
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.57 E-value=2e-06 Score=87.01 Aligned_cols=111 Identities=9% Similarity=0.005 Sum_probs=74.2
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEG 136 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~ 136 (471)
....+...+....+..++.++.+++.||+|||+.++++..+..+....... ..++...+. -++.|++.+...+...
T Consensus 239 ~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~--~~l~g~g~g~~~~~~~ 314 (393)
T PRK09705 239 AQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIW--LPLQLPVLW--AMVCGLGLGGAFPLCL 314 (393)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH--ccchHHHHH--HHHHHHhccchHHHHH
Confidence 333444455555666788899999999999999988886654442222211 122222222 2456777777665555
Q ss_pred hhhccCC-CCCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 137 AIMTSYP-PPNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 137 ~~i~~~~-~~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
....+.. |+++||+.+|+.+....++..+||.+..
T Consensus 315 ~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G 350 (393)
T PRK09705 315 LLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSG 350 (393)
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555 4678999999999999999999998863
No 139
>PRK10504 putative transporter; Provisional
Probab=98.55 E-value=1.8e-06 Score=89.52 Aligned_cols=102 Identities=13% Similarity=0.026 Sum_probs=77.0
Q ss_pred HHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCch
Q 012075 69 TTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRK 148 (471)
Q Consensus 69 ~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~R 148 (471)
....++.++++++.||+|||+.+.++.++..+...........++.+.+.+.-++.|++.+...+....+..+..|+++|
T Consensus 308 ~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 387 (471)
T PRK10504 308 LGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLA 387 (471)
T ss_pred HHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhc
Confidence 33344557899999999999999988876655322222211123344455667788898888888888888888999999
Q ss_pred hhHHHHHHHHHHhhhhhhhHHH
Q 012075 149 GTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 149 G~~~g~~~~~~~~G~~iG~~i~ 170 (471)
|..++++.....+|..+|+.+.
T Consensus 388 g~~~~~~~~~~~~g~~ig~~i~ 409 (471)
T PRK10504 388 SSGNSLLSMIMQLSMSIGVTIA 409 (471)
T ss_pred cchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998886
No 140
>PRK03545 putative arabinose transporter; Provisional
Probab=98.54 E-value=2.3e-06 Score=86.43 Aligned_cols=107 Identities=15% Similarity=0.045 Sum_probs=74.9
Q ss_pred hHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhc
Q 012075 61 NNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMT 140 (471)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~ 140 (471)
....+.......+++++.++++||+|||... ++..+..+..... . ...++.+.+++..++.|++.+...+....++.
T Consensus 244 ~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l-~-~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 320 (390)
T PRK03545 244 TLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLL-L-PAANSEWHLSVLSIFWGIAIMCIGLAMQVKVL 320 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHH-H-HHhchHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 3334444455667789999999999998754 3433222211111 1 12466778888999999988766555666777
Q ss_pred cCCCCCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 141 SYPPPNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 141 ~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
+..| ++||+++|++....++|..+|+.+..
T Consensus 321 ~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G 350 (390)
T PRK03545 321 KLAP-DATDVAMALFSGIFNIGIGAGALLGN 350 (390)
T ss_pred HhCC-CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7754 68999999999999999999999873
No 141
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.52 E-value=7.6e-07 Score=89.18 Aligned_cols=111 Identities=15% Similarity=0.036 Sum_probs=80.2
Q ss_pred hHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHH-HHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhh
Q 012075 61 NNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYA-GSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIM 139 (471)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~-~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i 139 (471)
+...........++.++.++++||+|||+.+.++..+..+.. .........++.+.++...++.|++.+...+....++
T Consensus 258 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 337 (394)
T TIGR00883 258 LLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFL 337 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 334444555666778899999999999998876554333211 1111111134667777888999999988888888999
Q ss_pred ccCCCCCchhhHHHH-HHHHHHhhhhhhhHHHH
Q 012075 140 TSYPPPNRKGTYISI-FWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 140 ~~~~~~~~RG~~~g~-~~~~~~~G~~iG~~i~~ 171 (471)
.|..|+++|++..++ +.....+|..+||.+..
T Consensus 338 ~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g 370 (394)
T TIGR00883 338 PELFPTEVRYTGASLAYNLAGAIFGGFAPYIAA 370 (394)
T ss_pred HHhCCccceeeEeeehhHhHHHHHhhHHHHHHH
Confidence 999999999999998 45566788888988873
No 142
>TIGR00898 2A0119 cation transport protein.
Probab=98.49 E-value=3.5e-06 Score=88.10 Aligned_cols=100 Identities=9% Similarity=0.028 Sum_probs=76.7
Q ss_pred HHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhh
Q 012075 71 FTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGT 150 (471)
Q Consensus 71 ~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~ 150 (471)
...+.++.+.+.||+|||+.+.++.++..+....... ....+.+..++.-++.+++.+..++....+..|..|++.|++
T Consensus 368 ~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 446 (505)
T TIGR00898 368 ELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLF-VPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNL 446 (505)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhh
Confidence 3456688999999999999999988765543322222 111222555666677778888778888899999999999999
Q ss_pred HHHHHHHHHHhhhhhhhHHHH
Q 012075 151 YISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 151 ~~g~~~~~~~~G~~iG~~i~~ 171 (471)
.+|+......+|.+++|.+..
T Consensus 447 ~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 447 GVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred hHhHHHHHHHHHHHHHhHHHH
Confidence 999999999999999998874
No 143
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.48 E-value=0.00015 Score=73.18 Aligned_cols=99 Identities=18% Similarity=0.268 Sum_probs=78.7
Q ss_pred hhhchhhhhhhc-cchhHHHHHHHHHHHHHHHHHHhhhcc-cchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCC--Cch
Q 012075 73 IFGILGGGIYNI-LGPQVTLISACSTYVLYAGSFLYYNHH-KHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPP--NRK 148 (471)
Q Consensus 73 i~~~~~g~l~d~-~Grk~~l~i~~~~~~~~~~~~~~~~~~-~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~--~~R 148 (471)
+.++++|+++|| +|+|++++.|.+++.+.-..... .+ .+...++++-++.++|.|..-+...+.+.|..|+ .+|
T Consensus 76 ~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~--~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dprr 153 (498)
T COG3104 76 LTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAI--SSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRR 153 (498)
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhc--cccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCccc
Confidence 456889999999 89999999999988764433322 11 3567889999999999999988888888888763 247
Q ss_pred hhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 149 GTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 149 G~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
-..++++.+..++|++++|++....
T Consensus 154 D~gFt~fY~~iNiGsl~~p~i~~~~ 178 (498)
T COG3104 154 DGGFTLFYMGINIGSLIAPIITGLL 178 (498)
T ss_pred CCCccEEEEEeehHHHHHHHHHHHH
Confidence 7788999999999999999987433
No 144
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.45 E-value=6.5e-06 Score=82.85 Aligned_cols=107 Identities=15% Similarity=0.036 Sum_probs=79.8
Q ss_pred hhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhh
Q 012075 59 AANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAI 138 (471)
Q Consensus 59 ~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~ 138 (471)
..+...+.......++.++.+++.||+|||+.+.++.....+...... +....+.+.++.|++.....+.....
T Consensus 236 ~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~l~g~~~~~~~p~~~~~ 309 (381)
T PRK03633 236 SIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML------SQAAMAPALFILGAAGFTLYPVAMAW 309 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh------hhHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 334445555566677889999999999999999888776554222111 12344567788888777777777788
Q ss_pred hccCCCCCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 139 MTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 139 i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
+.|..|+++++...+.+....++|..+||.++.
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G 342 (381)
T PRK03633 310 ACEKVEHHELVAMNQALLLSYTVGSLLGPSFTA 342 (381)
T ss_pred HHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889888888888889888889999999999873
No 145
>TIGR00895 2A0115 benzoate transport.
Probab=98.45 E-value=1.6e-06 Score=87.09 Aligned_cols=110 Identities=20% Similarity=0.158 Sum_probs=83.2
Q ss_pred hhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhh
Q 012075 58 TAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGA 137 (471)
Q Consensus 58 ~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~ 137 (471)
...+...+....+..++.++.++++||+|||+.+....+ ..+...... ...++.+.+++..++.|++.+...+...+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 361 (398)
T TIGR00895 285 SLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLL-GAVFAVLVG--STLFSPTLLLLLGAIAGFFVNGGQSGLYA 361 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHH-HHHHHHHHH--HHhhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555566677888999999999999954443333 222111111 11356777888899999999999888999
Q ss_pred hhccCCCCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 138 IMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 138 ~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
++.|..|+++||+.+|++.....+|..+||.+.
T Consensus 362 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~ 394 (398)
T TIGR00895 362 LMALFYPTAIRATGVGWAIGIGRLGAIIGPILA 394 (398)
T ss_pred HHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999999999999999886
No 146
>PRK09952 shikimate transporter; Provisional
Probab=98.44 E-value=6.3e-06 Score=84.65 Aligned_cols=103 Identities=11% Similarity=-0.009 Sum_probs=71.1
Q ss_pred HHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhh-cccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchh
Q 012075 71 FTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYN-HHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKG 149 (471)
Q Consensus 71 ~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~-~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG 149 (471)
..++.++.|+++||+|||+.++.+.+...+......... ..++.+.+++.-++.|++.+..++...+++.|..|++.|+
T Consensus 299 ~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~ 378 (438)
T PRK09952 299 SCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRY 378 (438)
T ss_pred HHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhH
Confidence 345667899999999999998887654433221121111 1123444555667778888887777889999999999999
Q ss_pred hHHHHHH-HHHHhhhhhhhHHHHHh
Q 012075 150 TYISIFW-SIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 150 ~~~g~~~-~~~~~G~~iG~~i~~~~ 173 (471)
...++-+ ....+|..++|.+...+
T Consensus 379 tg~g~~~~~~~~lgg~~~p~i~g~l 403 (438)
T PRK09952 379 SGAGVGYQVASVVGGGFTPFIAAAL 403 (438)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 8888844 44557888888776333
No 147
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.42 E-value=1.9e-06 Score=89.75 Aligned_cols=114 Identities=8% Similarity=-0.023 Sum_probs=79.4
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEG 136 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~ 136 (471)
+...+...+....+..+++++.|+++||+|||+.+.++.++..+....... ....+.+.+.+..++.|+......+..+
T Consensus 310 ~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (496)
T PRK03893 310 PHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFA-IGGANVWVLGLLLFFQQMLGQGISGLLP 388 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhh-ccccHHHHHHHHHHHHHHHhcccchhhH
Confidence 444455556666777788899999999999999988877554432221111 1123344444555554443333445667
Q ss_pred hhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 137 AIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 137 ~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
.++.|..|+++||+.+|+++....+|..+||.+..
T Consensus 389 ~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g 423 (496)
T PRK03893 389 KLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGA 423 (496)
T ss_pred HHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHH
Confidence 78899999999999999999999999999999873
No 148
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.42 E-value=4e-06 Score=86.91 Aligned_cols=113 Identities=14% Similarity=0.055 Sum_probs=76.7
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEG 136 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~ 136 (471)
+...+...+....+..++.+++|+++||+|||+.+++......+....... ...++.+.+++.+++.|+.........+
T Consensus 293 ~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~~~ 371 (467)
T PRK09556 293 KEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVY-QHATSEYMYLASLFALGFLVFGPQLLIG 371 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHhhHHHHHH
Confidence 444445556666677889999999999999998876654433221111111 1234566677888888865444333334
Q ss_pred hhhccCCCCCchhhHHHHHHHHHHh-hhhhhhHHH
Q 012075 137 AIMTSYPPPNRKGTYISIFWSIFNM-GGVIGGLIP 170 (471)
Q Consensus 137 ~~i~~~~~~~~RG~~~g~~~~~~~~-G~~iG~~i~ 170 (471)
.+..|..|+++||++.|+.....++ |..++|.+.
T Consensus 372 ~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~ 406 (467)
T PRK09556 372 VAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGL 406 (467)
T ss_pred HHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhH
Confidence 5667999999999999999888775 667777765
No 149
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.41 E-value=1.7e-06 Score=89.34 Aligned_cols=113 Identities=11% Similarity=-0.015 Sum_probs=81.1
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhc--cchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNI--LGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~--~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
+...+...+....+..++.++.+.++|| +++|+...++....... .+.+.....++.+.+++.+++.|++.+..++.
T Consensus 275 ~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~-l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~ 353 (455)
T TIGR00892 275 EYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNG-LTHLLCALAGDYTGLVIYCIFFGLSFGSVGAL 353 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHH-HHHHHHHHhchHHHHHHHHHHHHHHhchHHHH
Confidence 3344444555555556667888999997 44454444433222111 11112223567888899999999999998888
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
...++.|..|+++||+.+|++....++|..+||.+.
T Consensus 354 ~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~ 389 (455)
T TIGR00892 354 LFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLA 389 (455)
T ss_pred HHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccce
Confidence 888899999999999999999999999999999887
No 150
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.40 E-value=5.5e-06 Score=84.99 Aligned_cols=113 Identities=14% Similarity=0.023 Sum_probs=68.5
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhcc--c-hhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNIL--G-PQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWA 133 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~--G-rk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~ 133 (471)
....+...+....+..++.+++|+++||+ + ||+......+...+......... ..+...+.+..+..|++......
T Consensus 278 ~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~ 356 (434)
T PRK11663 278 LVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP-FASYVMQAACFFTIGFFVFGPQM 356 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcc-cccHHHHHHHHHHHHHHHhhHHH
Confidence 33444556666677788899999999999 3 33332222211111111111111 22333344444445544332222
Q ss_pred hhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 134 AEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 134 ~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
....+..|..|+++||+.+|+.+...++|..+||.+.
T Consensus 357 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~ 393 (434)
T PRK11663 357 LIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPL 393 (434)
T ss_pred HHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccH
Confidence 3355678999999999999999999999999998876
No 151
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.40 E-value=6.9e-06 Score=83.33 Aligned_cols=137 Identities=17% Similarity=0.185 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHhhhchhhhhhhccchhHHHH-HHHHHHHHHHHHHHh-h-hcccchHHHHHHHHHHhhhhhHHHhhhhhh
Q 012075 62 NANTALYTTFTIFGILGGGIYNILGPQVTLI-SACSTYVLYAGSFLY-Y-NHHKHQAFAIAAGAILGIGAGLLWAAEGAI 138 (471)
Q Consensus 62 ~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~-i~~~~~~~~~~~~~~-~-~~~~~~~~li~~r~l~G~g~g~~~~~~~~~ 138 (471)
...+....+..+++++.|+++||+|||+.+. .+.+...+....... . ...++.+..++..++.|++.+...+. ...
T Consensus 261 ~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~ 339 (402)
T TIGR00897 261 QIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAV 339 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 3344455667788899999999999988764 232222221111111 0 11245677788899999988875443 345
Q ss_pred hccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhc
Q 012075 139 MTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVI 205 (471)
Q Consensus 139 i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l 205 (471)
+.|. +|++||+.+|+++....+|..+||.+...+ .+. .++ ...++...++..++.++..|+
T Consensus 340 ~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l-~~~---~g~-~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 340 FPTL-APKHKGAAMSVLNLSAGLSAFLAPAIAVLF-IGF---FGA-IGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHhh-CcchhHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh---cch-HHHHHHHHHHHHHHHHHHHHh
Confidence 5666 567899999999999999999999887333 221 122 223344444444444444454
No 152
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.40 E-value=3.9e-06 Score=86.31 Aligned_cols=140 Identities=11% Similarity=0.014 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHh--hhccc------chHHHHHHHHHHhhhhhH-HH
Q 012075 62 NANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLY--YNHHK------HQAFAIAAGAILGIGAGL-LW 132 (471)
Q Consensus 62 ~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~--~~~~~------~~~~li~~r~l~G~g~g~-~~ 132 (471)
........+..++.+++++++||+|||+.+.++.++..+....... ....+ +...+....++ +.+.+. ..
T Consensus 323 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 401 (481)
T TIGR00879 323 LVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLF-IAFFAMGWG 401 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHH-HHHHHcccc
Confidence 3344445556678899999999999999998887655443222221 01111 22222223332 222222 23
Q ss_pred hhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccC
Q 012075 133 AAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILP 207 (471)
Q Consensus 133 ~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~ 207 (471)
+....++.|..|+++||+.+++.....++|..+++.+...+... .++.+ .|+...++.+++.++.+++.|
T Consensus 402 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~----~~~~~-~f~~~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 402 PVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES----IGVGG-VFIFFGGLNVLGLIFVYFFLP 471 (481)
T ss_pred CeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCccc-eehhHHHHHHHHHHHHheecc
Confidence 44556778999999999999999999999999999875333211 12333 334444455555555544444
No 153
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.39 E-value=3.8e-06 Score=85.72 Aligned_cols=108 Identities=12% Similarity=0.106 Sum_probs=70.5
Q ss_pred hHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhh--hhHHHhhhhhh
Q 012075 61 NNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIG--AGLLWAAEGAI 138 (471)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g--~g~~~~~~~~~ 138 (471)
....+....+..++.++++++.||+|||+.+..+.+...+....... ..++... ...-++.|++ ........+.+
T Consensus 269 ~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 345 (426)
T PRK12307 269 SNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFR--IPQDNYL-LLGACLFGLMATNVGVGGLVPKF 345 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH--HccccHH-HHHHHHHHHHHhcccHhHHHHHH
Confidence 33444455556677899999999999999988887654332221111 1112222 2222333332 22223445677
Q ss_pred hccCCCCCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 139 MTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 139 i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
+.|..|+++||+++|+......+|..+||.+..
T Consensus 346 ~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g 378 (426)
T PRK12307 346 LYDYFPLEVRGLGTGLIYNLAATSGTFNSMAAT 378 (426)
T ss_pred HHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHH
Confidence 889999999999999999999999999999863
No 154
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.39 E-value=2e-06 Score=85.27 Aligned_cols=107 Identities=12% Similarity=0.058 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhccc-chHHHHHHHHHHhhhhhHHHhhhhhhh
Q 012075 61 NNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHK-HQAFAIAAGAILGIGAGLLWAAEGAIM 139 (471)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~-~~~~li~~r~l~G~g~g~~~~~~~~~i 139 (471)
+...+....+..++.++.+++.||+|||+.+..+.+...+...... ..+ +.+.+++..++.|++.+...+....++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 326 (365)
T TIGR00900 250 GWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVG---LTPPNFPLFLVLWFAIGVGYGPINVPQGTLL 326 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHH---hhchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555667788899999999999998887654443222222 234 477888999999999999888888999
Q ss_pred ccCCCCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 140 TSYPPPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 140 ~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
.|..|+++||+..|++.....+|..+|+.+.
T Consensus 327 ~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~ 357 (365)
T TIGR00900 327 QRRVPAELLGRVFGAQFSLSHAAWPLGLILA 357 (365)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999886
No 155
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.39 E-value=9.4e-06 Score=81.73 Aligned_cols=104 Identities=7% Similarity=-0.055 Sum_probs=79.4
Q ss_pred HHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCC
Q 012075 64 NTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYP 143 (471)
Q Consensus 64 ~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~ 143 (471)
.+.......+..++.+++.||+|+|+.+.++.+...+..... ...++.+.+++..++.|++.+...+....++.+.
T Consensus 246 ~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~- 321 (382)
T PRK11128 246 WSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLM---GSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR- 321 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 333334445566889999999999999998887665432221 2357888889999999999999888888888886
Q ss_pred CCCchhhHHHHHH-HHHHhhhhhhhHHHH
Q 012075 144 PPNRKGTYISIFW-SIFNMGGVIGGLIPF 171 (471)
Q Consensus 144 ~~~~RG~~~g~~~-~~~~~G~~iG~~i~~ 171 (471)
+++++++..+.+. .....|..+|+.++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~g~~ig~~i~G 350 (382)
T PRK11128 322 PGSEVIRLQALYSALAMGGSIAIMTVLSG 350 (382)
T ss_pred CHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6667899999886 556778889998873
No 156
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.37 E-value=1e-05 Score=83.52 Aligned_cols=107 Identities=15% Similarity=0.242 Sum_probs=86.3
Q ss_pred HHHHHHhhhchhhhhhhccchh--HHHHHHHHHHHHHH-HHHH--h--hhcccchHHHHHHHHHHhhhhhHHHhhhhhhh
Q 012075 67 LYTTFTIFGILGGGIYNILGPQ--VTLISACSTYVLYA-GSFL--Y--YNHHKHQAFAIAAGAILGIGAGLLWAAEGAIM 139 (471)
Q Consensus 67 ~~~~~~i~~~~~g~l~d~~Grk--~~l~i~~~~~~~~~-~~~~--~--~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i 139 (471)
......+|++++|++.||+|.| ++++++.+.+.+.. .+++ . ....++.+.+++..++.|+..|..++..-++.
T Consensus 326 ~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~ 405 (477)
T PF11700_consen 326 VQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLF 405 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 3455577889999999999999 88888887764311 1111 0 00146788899999999999999999999999
Q ss_pred ccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 140 TSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 140 ~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
+|+.|+++.+..+|+|...-...+.+||++-..+
T Consensus 406 ~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i 439 (477)
T PF11700_consen 406 SRLIPPGREAEFFGLYAITGKASSWLGPLLFGLI 439 (477)
T ss_pred HHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999986333
No 157
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.35 E-value=1.4e-06 Score=85.86 Aligned_cols=107 Identities=23% Similarity=0.330 Sum_probs=83.5
Q ss_pred hHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhc
Q 012075 61 NNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMT 140 (471)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~ 140 (471)
....+.......++.++.+++.||+|+|+.+.+......+...........++....++.-++.|++.+...+....++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 325 (352)
T PF07690_consen 246 GLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQ 325 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345555556667889999999999988887777666554333332222345567777889999999999999999999
Q ss_pred cCCCCCchhhHHHHHHHHHHhhhhhhh
Q 012075 141 SYPPPNRKGTYISIFWSIFNMGGVIGG 167 (471)
Q Consensus 141 ~~~~~~~RG~~~g~~~~~~~~G~~iG~ 167 (471)
|..|+++||+..|++....++|..+||
T Consensus 326 ~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 326 ELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp CCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999999999999999999999999887
No 158
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.35 E-value=9.2e-06 Score=83.15 Aligned_cols=105 Identities=12% Similarity=0.095 Sum_probs=79.9
Q ss_pred HHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCC
Q 012075 65 TALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPP 144 (471)
Q Consensus 65 ~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~ 144 (471)
.+......++.+++++++||+|||+.+.++.++..+....... ..++.+.+++..++.|++.+...+...++++|..|
T Consensus 264 ~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 341 (437)
T TIGR00792 264 SIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFF--AGSNLPLILVLIILAGFGQNFVTGLVWALVADTVD 341 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 3334555667789999999999999999988765543322222 12456677788889999999888878888888765
Q ss_pred -------CCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 145 -------PNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 145 -------~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
++++|..+|+++....+|..+|+.+..
T Consensus 342 ~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g 375 (437)
T TIGR00792 342 YGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVG 375 (437)
T ss_pred hhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566899999999999999999988753
No 159
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.35 E-value=6.5e-06 Score=84.90 Aligned_cols=109 Identities=13% Similarity=-0.028 Sum_probs=63.9
Q ss_pred hHHHHHHHHHHHhhhchhhhhhhcc--chhHHHH-HHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhh
Q 012075 61 NNANTALYTTFTIFGILGGGIYNIL--GPQVTLI-SACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGA 137 (471)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~g~l~d~~--Grk~~l~-i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~ 137 (471)
+........+..++.+++|+++||+ |||.... ....+..+....... ...++.+..+++.++.|.+..........
T Consensus 292 ~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 370 (452)
T PRK11273 292 SWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWL-NPAGNPTVDMACMIVIGFLIYGPVMLIGL 370 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHH-hcccChHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3334444455556789999999999 5664322 222222221111111 11234455555555555544333333445
Q ss_pred hhccCCCCCchhhHHHHHHHHHHhhhh-hhhHHH
Q 012075 138 IMTSYPPPNRKGTYISIFWSIFNMGGV-IGGLIP 170 (471)
Q Consensus 138 ~i~~~~~~~~RG~~~g~~~~~~~~G~~-iG~~i~ 170 (471)
+..|..|+++||+.+|+.....++|.. +||.+.
T Consensus 371 ~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~ 404 (452)
T PRK11273 371 HALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV 404 (452)
T ss_pred HHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhH
Confidence 667899999999999999888788754 477765
No 160
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.34 E-value=4e-06 Score=88.53 Aligned_cols=58 Identities=21% Similarity=0.315 Sum_probs=53.4
Q ss_pred HHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 116 FAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 116 ~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
.++++-++.|+|....++...+|+.|...+++-..++|+++++..+|+++|.+++..+
T Consensus 239 lff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~ 296 (735)
T KOG3626|consen 239 LFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFC 296 (735)
T ss_pred HHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 5678999999999999999999999999999999999999999999999999987443
No 161
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.33 E-value=2.5e-05 Score=79.01 Aligned_cols=94 Identities=23% Similarity=0.394 Sum_probs=74.5
Q ss_pred chhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHH----HHHHHHhhhhhHHHhhhhhhhccCCCCCchhhH
Q 012075 76 ILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAI----AAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTY 151 (471)
Q Consensus 76 ~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li----~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~ 151 (471)
++.+.+..|+|.|+.+.++.+.+.+=-..... .+++.+..+ .+-.++|+..+..+.+...|+.+.+|++.|++.
T Consensus 261 ~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~--~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~ 338 (400)
T PF03825_consen 261 FFSGRFLKRFGIKWLLLLALVAYAVRWLLYAY--FSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATA 338 (400)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH--hcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHH
Confidence 57899999999999999999987663222222 124444433 334579999999999999999999999999999
Q ss_pred HHHHHHH-HHhhhhhhhHHHH
Q 012075 152 ISIFWSI-FNMGGVIGGLIPF 171 (471)
Q Consensus 152 ~g~~~~~-~~~G~~iG~~i~~ 171 (471)
.+++... ..+|..+|+.++.
T Consensus 339 Q~l~~~~~~Glg~~iG~~igG 359 (400)
T PF03825_consen 339 QGLYSALSFGLGGAIGSLIGG 359 (400)
T ss_pred HHHHHHHHhhHHHHHHHHHHH
Confidence 9999875 5689999999873
No 162
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.31 E-value=1.3e-05 Score=79.96 Aligned_cols=111 Identities=22% Similarity=0.114 Sum_probs=71.5
Q ss_pred hhHHHHHHHHHHHhhhchhhhhhhccchhHHHHH-H----HHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 60 ANNANTALYTTFTIFGILGGGIYNILGPQVTLIS-A----CSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 60 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i-~----~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
.+...+.......++.++.++++||+|||+.... . .+...+...........++.+..+..-.+.+++.+ ..+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 331 (399)
T TIGR00893 253 AGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAI 331 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhH
Confidence 3444455556667788999999999999961111 1 11111101111111112344444444555555555 6677
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
...++.|..|+++||+.+|++.....+|..+|+.+..
T Consensus 332 ~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g 368 (399)
T TIGR00893 332 GWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIG 368 (399)
T ss_pred HHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhh
Confidence 8889999999999999999999999999999998863
No 163
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.31 E-value=1.3e-05 Score=83.08 Aligned_cols=104 Identities=10% Similarity=-0.012 Sum_probs=70.7
Q ss_pred HHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchH-HHHHHHHHHhhhhhHHH-hhhhhhhccCCC
Q 012075 67 LYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQA-FAIAAGAILGIGAGLLW-AAEGAIMTSYPP 144 (471)
Q Consensus 67 ~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~-~li~~r~l~G~g~g~~~-~~~~~~i~~~~~ 144 (471)
......++++++++++||+|||+.++.+.++..+...........+..+ ..+.+-++.+++.+..+ +....++.|..|
T Consensus 315 ~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 394 (479)
T PRK10077 315 VGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFP 394 (479)
T ss_pred HHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCC
Confidence 3344567789999999999999999999887665433322111111111 22233344444444333 456788899999
Q ss_pred CCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 145 PNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 145 ~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
+++||+++|+......+|.++++.+.
T Consensus 395 ~~~r~~~~g~~~~~~~~g~~~~~~~~ 420 (479)
T PRK10077 395 NAIRGKALAIAVAAQWIANYFVSWTF 420 (479)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998887664
No 164
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.31 E-value=2.2e-05 Score=80.46 Aligned_cols=110 Identities=13% Similarity=0.126 Sum_probs=62.7
Q ss_pred hHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHh-hhcccchHHHHHHHHHHhhhhhHHHhhhhhhh
Q 012075 61 NNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLY-YNHHKHQAFAIAAGAILGIGAGLLWAAEGAIM 139 (471)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~-~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i 139 (471)
....++......++.++.|+++||+|||+.++++.++..+....... ....++....+..-.+.++..+........+.
T Consensus 282 ~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (432)
T PRK10406 282 SGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILK 361 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444555677788899999999999888776543222111111 11112233222222223333343344466788
Q ss_pred ccCCCCCchhhHHHHHHHHHHh-hhhhhhHHH
Q 012075 140 TSYPPPNRKGTYISIFWSIFNM-GGVIGGLIP 170 (471)
Q Consensus 140 ~~~~~~~~RG~~~g~~~~~~~~-G~~iG~~i~ 170 (471)
.|..|++.||..+|+.+..-+. .....|.+.
T Consensus 362 ~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~ 393 (432)
T PRK10406 362 AEMFPAQVRALGVGLSYAVANALFGGSAEYVA 393 (432)
T ss_pred HHHCCCCccchhhhHHHHHHHHHHHhHHHHHH
Confidence 9999999999999998754332 222355554
No 165
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.30 E-value=8.6e-06 Score=85.07 Aligned_cols=116 Identities=16% Similarity=0.108 Sum_probs=87.5
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++...+...........+++++.|++.||+|||+.+..+.++..+...........++.+..+..-++.|+|.|...+..
T Consensus 293 s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~ 372 (495)
T PRK14995 293 SPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLAS 372 (495)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHH
Confidence 34444444555556667788999999999999999888877655433222221223456667778899999999987777
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
...+.+..|++++|...++++...++|..+|+.+..
T Consensus 373 ~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g 408 (495)
T PRK14995 373 TSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFG 408 (495)
T ss_pred HHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 777778889999999999999999999999998863
No 166
>PRK03699 putative transporter; Provisional
Probab=98.30 E-value=1.7e-05 Score=80.24 Aligned_cols=110 Identities=9% Similarity=0.039 Sum_probs=80.2
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEG 136 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~ 136 (471)
+...+...+....+..++.++.+.++||+|||+.+....++..+..... ...++.+.+.+..++.|++.+..++...
T Consensus 240 ~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~G~~~~~~~~~~~ 316 (394)
T PRK03699 240 LEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLF---VNTDDPSHLLYAILGLGFFSSAIYTTII 316 (394)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH---HHcCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445566667778899999999999999998887765443321111 1245666677788889998887777766
Q ss_pred hhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 137 AIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 137 ~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
++..|..| +++++..+.......+|..+||.+.
T Consensus 317 ~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~ 349 (394)
T PRK03699 317 TLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVT 349 (394)
T ss_pred HHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHH
Confidence 67777654 5577888888888899999999886
No 167
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.29 E-value=8.2e-06 Score=82.20 Aligned_cols=112 Identities=13% Similarity=0.109 Sum_probs=84.5
Q ss_pred hhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhh
Q 012075 60 ANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIM 139 (471)
Q Consensus 60 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i 139 (471)
.+...+....+..++.++.+++.||+|||+.+.++.+...+...... ...++.+.+.++.++.|+..+..++..+.++
T Consensus 276 ~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (405)
T TIGR00891 276 VANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVF--AIGANVAVLGLGLFFQQMLVQGIWGILPKHL 353 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHH--HhCCchHHHHHHHHHHHHHHccchhhHHHHH
Confidence 33444555566677889999999999999999888765422211111 1235666777777888887777777788899
Q ss_pred ccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 140 TSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 140 ~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
.|..|+++||+.+|+.+....+|..+||.+...+
T Consensus 354 ~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l 387 (405)
T TIGR00891 354 GEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALL 387 (405)
T ss_pred hhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999987333
No 168
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.27 E-value=5.3e-06 Score=84.48 Aligned_cols=113 Identities=11% Similarity=0.093 Sum_probs=79.0
Q ss_pred ccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCC
Q 012075 270 NLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSD 349 (471)
Q Consensus 270 ~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (471)
+..+.++....+.++..++.++.|++.|| +|||+.+..+.+...+ ..... .+ . ++
T Consensus 41 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr--~G~r~~~~~~~~~~~~-~~~~~----~~----~--------------~~ 95 (412)
T TIGR02332 41 SATMFGLAATLFYAAYVICGIPSNIMLAI--IGARRWIAGIMVLWGI-ASTAT----MF----A--------------TG 95 (412)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhHHHHHHH--hChHHHHHHHHHHHHH-HHHHH----HH----h--------------cC
Confidence 34456677777888889999999999999 8999976555443311 11111 10 0 12
Q ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 350 FAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 350 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
+...++.-++.|++.+...+....++.|.++ ++++++++++++...++|..++..+..
T Consensus 96 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~-~~~rg~~~~~~~~~~~~g~~~~~~~~~ 153 (412)
T TIGR02332 96 PESLYLLRILVGIAEAGFLPGILLYLTFWFP-AYFRARANALFMIAMPVTMALGLILSG 153 (412)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3335666778899988888877778899984 445689999999888888888777654
No 169
>PRK15075 citrate-proton symporter; Provisional
Probab=98.26 E-value=2.1e-05 Score=80.62 Aligned_cols=105 Identities=18% Similarity=0.128 Sum_probs=67.3
Q ss_pred HHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHH-HHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCC
Q 012075 66 ALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAG-SFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPP 144 (471)
Q Consensus 66 ~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~-~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~ 144 (471)
....+..++++++|+++||+|||+.++++.+...+... ........++...+.+..++.|++.+...+....++.|..|
T Consensus 282 ~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p 361 (434)
T PRK15075 282 CVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMP 361 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCC
Confidence 33444557788999999999999998876543322111 11111112344445555666677777666666678899999
Q ss_pred CCchhhHHHHHHHH-HHhhhhhhhHHH
Q 012075 145 PNRKGTYISIFWSI-FNMGGVIGGLIP 170 (471)
Q Consensus 145 ~~~RG~~~g~~~~~-~~~G~~iG~~i~ 170 (471)
+++||+.+++.+.. ..++..++|.+.
T Consensus 362 ~~~rg~~~g~~~~~~~~~~g~~~p~~~ 388 (434)
T PRK15075 362 AEVRTAGFSLAYSLATAIFGGFTPAIS 388 (434)
T ss_pred CCccchheeHHHHHHHHHHhhhHHHHH
Confidence 99999999986443 334456677665
No 170
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.26 E-value=1.3e-05 Score=83.26 Aligned_cols=115 Identities=15% Similarity=0.072 Sum_probs=85.1
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHH-hhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFL-YYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~-~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
+...+........+..++.+++|++.||+|||+.+.++.++..+...... ......+.+.++..-++.|+|.+...+..
T Consensus 290 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~ 369 (485)
T TIGR00711 290 ALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPL 369 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444445555566677889999999999999999888876554322222 11112345667777889999999887666
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
.....+..|+++||+++|+++...++|..+|+.+..
T Consensus 370 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g 405 (485)
T TIGR00711 370 TTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALIT 405 (485)
T ss_pred HHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 666667789999999999999999999999988863
No 171
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.21 E-value=2.4e-07 Score=96.91 Aligned_cols=57 Identities=21% Similarity=0.313 Sum_probs=3.0
Q ss_pred HHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 115 AFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 115 ~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
..++++.++.|+|.+..++...+|+.|+.++++-+.++|+++++..+|+.+|.+++.
T Consensus 142 ~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~ 198 (539)
T PF03137_consen 142 YVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGS 198 (539)
T ss_dssp ----------SSS--------------------------------------------
T ss_pred HHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHH
Confidence 457889999999999999999999999999999999999999999999999988863
No 172
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.20 E-value=1.5e-05 Score=79.76 Aligned_cols=113 Identities=19% Similarity=0.121 Sum_probs=79.0
Q ss_pred ccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCC
Q 012075 270 NLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSD 349 (471)
Q Consensus 270 ~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (471)
+..+.++....+.++..++.++.|++.|| +|||+....+.+... +..... ... ++
T Consensus 38 s~~~~g~~~~~~~~~~~~~~~~~g~l~d~--~g~r~~~~~~~~~~~-~~~~~~----~~~------------------~~ 92 (385)
T TIGR00710 38 PASIVQMTLTLYLLGFAAGQLLWGPLSDR--YGRRPVLLLGLFIFA-LSSLGL----ALS------------------NN 92 (385)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhHHHh--cCChHHHHHHHHHHH-HHHHHH----HHH------------------cc
Confidence 44456777778889999999999999999 899987766554432 111111 000 12
Q ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 350 FAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 350 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
+....+..++.|++.+...+....++.|.++ +++++++.+..+....++..++..+..
T Consensus 93 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~ 150 (385)
T TIGR00710 93 IETLLVLRFVQAFGASAGSVISQALVRDIYP-GEELSRIYSILMPVLALAPAVAPLLGG 150 (385)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2334556677888888888888888999884 445688999988888888777766554
No 173
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.20 E-value=2.6e-05 Score=79.05 Aligned_cols=92 Identities=13% Similarity=0.036 Sum_probs=68.7
Q ss_pred hhhhhh-hccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHH
Q 012075 77 LGGGIY-NILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIF 155 (471)
Q Consensus 77 ~~g~l~-d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~ 155 (471)
..+++. ||++.|+.+..+.+.+.+... .....++.+.+++..++.|++.+...+...+++.|..|+++||+.+|++
T Consensus 262 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~ 338 (400)
T PRK11646 262 PIARWSEKRFRLEHRLMAGLLIMSLSMF---PIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFS 338 (400)
T ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHHH---HHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHH
Confidence 334444 556766666666655543222 1122466777777888899988887778888899999999999999999
Q ss_pred HHHHHhhhhhhhHHHH
Q 012075 156 WSIFNMGGVIGGLIPF 171 (471)
Q Consensus 156 ~~~~~~G~~iG~~i~~ 171 (471)
+....+|..+||.+..
T Consensus 339 ~~~~~~g~~ig~~l~G 354 (400)
T PRK11646 339 RLGLALGGAIGYIGGG 354 (400)
T ss_pred HHHHHHHHHhcccchH
Confidence 9999999999999873
No 174
>PRK09848 glucuronide transporter; Provisional
Probab=98.20 E-value=2.1e-05 Score=81.09 Aligned_cols=99 Identities=22% Similarity=0.159 Sum_probs=76.5
Q ss_pred HHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCC----
Q 012075 71 FTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPN---- 146 (471)
Q Consensus 71 ~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~---- 146 (471)
..++.++++++.||+|+|+.+.++.++..+....... ....+.+.+++..++.|+|.+...+...+..+|..|++
T Consensus 277 ~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~-~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~ 355 (448)
T PRK09848 277 TVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFW-VSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLT 355 (448)
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhh
Confidence 4456788999999999999999998765543222222 11235677778888999999998888888888887643
Q ss_pred ---chhhHHHHHHHHHHhhhhhhhHHH
Q 012075 147 ---RKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 147 ---~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
++|...|.++....+|..+|+.+.
T Consensus 356 g~r~~G~~~~~~~~~~klg~aig~~i~ 382 (448)
T PRK09848 356 GVRIEGLTYSLFSFTRKCGQAIGGSIP 382 (448)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999998875
No 175
>PRK09669 putative symporter YagG; Provisional
Probab=98.20 E-value=1.7e-05 Score=81.62 Aligned_cols=101 Identities=10% Similarity=0.089 Sum_probs=75.2
Q ss_pred HHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCC----
Q 012075 69 TTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPP---- 144 (471)
Q Consensus 69 ~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~---- 144 (471)
....++.+++++++||+|+|+.+.++.+...+....... ...++.+.+++..++.|++.+...+...+.++|..|
T Consensus 275 i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~ 353 (444)
T PRK09669 275 IAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFF-IPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEK 353 (444)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-hCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 333456688999999999999999887655432221221 113567778888899999999998888888888875
Q ss_pred ---CCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 145 ---PNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 145 ---~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
++..|...+.+.....+|..+|+.+.
T Consensus 354 ~~G~r~~g~~~s~~~~~~klg~alg~~i~ 382 (444)
T PRK09669 354 RSGRRLDGLVFSTNLFAIKLGLAIGGAVV 382 (444)
T ss_pred hcCcCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 23356778888888899999998876
No 176
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.18 E-value=1.8e-05 Score=78.71 Aligned_cols=91 Identities=18% Similarity=0.179 Sum_probs=71.1
Q ss_pred HHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhh-cc-------cchHHHHHHHHHHhhhhhHHHhhhhhhhcc
Q 012075 70 TFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYN-HH-------KHQAFAIAAGAILGIGAGLLWAAEGAIMTS 141 (471)
Q Consensus 70 ~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~-~~-------~~~~~li~~r~l~G~g~g~~~~~~~~~i~~ 141 (471)
...++.++++++.||+|||+.++++.++..+......... .. ++.+.++.+.++.|++.+..++...+++.|
T Consensus 257 ~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 336 (356)
T TIGR00901 257 GAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSK 336 (356)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3456778999999999999998888876654333222211 11 345678888999999999999999999999
Q ss_pred CCCCCchhhHHHHHHHHHH
Q 012075 142 YPPPNRKGTYISIFWSIFN 160 (471)
Q Consensus 142 ~~~~~~RG~~~g~~~~~~~ 160 (471)
.+|+|+||+.+|++++..+
T Consensus 337 ~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 337 LSNPKFGATQMALLSSLSA 355 (356)
T ss_pred hcCCCccHHHHHHHHHHHh
Confidence 9999999999999877654
No 177
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.18 E-value=3.9e-05 Score=77.62 Aligned_cols=105 Identities=11% Similarity=-0.037 Sum_probs=79.1
Q ss_pred HHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccC
Q 012075 63 ANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSY 142 (471)
Q Consensus 63 ~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~ 142 (471)
..+.......++.++.+++.||+|||+.+.++.+++.+..... ..++|.+.+++.+++.|++.+........+..+.
T Consensus 259 ~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~---~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 335 (396)
T TIGR00882 259 VTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGS---SFATTALEVVILKMLHAFEVPFLLVGCFKYITSQ 335 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHH---HhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444556667889999999999999999887766533222 2257888889999999999877665566677777
Q ss_pred CCCCchhhHHHH-HHHHHHhhhhhhhHHH
Q 012075 143 PPPNRKGTYISI-FWSIFNMGGVIGGLIP 170 (471)
Q Consensus 143 ~~~~~RG~~~g~-~~~~~~~G~~iG~~i~ 170 (471)
.+++.|+...+. ++....+|..+|+.+.
T Consensus 336 ~~~~~~at~~~~~~~~~~~lg~~~~~~l~ 364 (396)
T TIGR00882 336 FDVRLSATIYLIGFQFAKQLAMIFLSTLA 364 (396)
T ss_pred CCcceEEEeehHHHHHHHHHHHHHHHHhH
Confidence 788888877666 6778899999998876
No 178
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.17 E-value=0.00011 Score=76.74 Aligned_cols=103 Identities=15% Similarity=0.050 Sum_probs=70.7
Q ss_pred HHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhc-ccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCC
Q 012075 68 YTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNH-HKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPN 146 (471)
Q Consensus 68 ~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~-~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~ 146 (471)
..+..++.+++|+++||+|||+.++++.++..+....++.... .++.+.+.+.-++..+..|...++..++..+..+++
T Consensus 269 ~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~ 348 (491)
T PRK11010 269 LLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKS 348 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4556688899999999999998887766544432222221121 234555555556655555555555567778888999
Q ss_pred chhhHHHHHHHHHHhhhhhhhHHH
Q 012075 147 RKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 147 ~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
.+|+..++.++...+|..+++.+.
T Consensus 349 ~~~t~~gl~~s~~~lg~~~~~~~~ 372 (491)
T PRK11010 349 FSATQFALLSALSAVGRVYVGPVA 372 (491)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987666654
No 179
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.17 E-value=3.9e-05 Score=78.82 Aligned_cols=116 Identities=15% Similarity=0.030 Sum_probs=71.3
Q ss_pred ccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCC
Q 012075 268 QFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSG 347 (471)
Q Consensus 268 ~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (471)
+.+..+.++....+.++..++.++.|++.|| +|||+....+...... ..... ... + . ..
T Consensus 57 g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr--~g~~~~~~~~~~~~~~-~~~~~----~~~---~--------~-~~-- 115 (438)
T TIGR00712 57 GFSKGELGFALSAISIAYGFSKFIMGSVSDR--SNPRVFLPAGLILSAA-VMLLM----GFV---P--------W-AT-- 115 (438)
T ss_pred CCCHhHhHHHHHHHHHHHHHhhhccchhhhc--cCCceehHHHHHHHHH-HHHHH----hcc---c--------c-cc--
Confidence 3444456677778889999999999999999 7899866655443321 11111 000 0 0 01
Q ss_pred CCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhh
Q 012075 348 SDFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQ 405 (471)
Q Consensus 348 ~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~ 405 (471)
.++....+..++.|++.+...+.....+.+.++ ++++++++++++...+++..+.-.
T Consensus 116 ~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~~g~~~~~~ 172 (438)
T TIGR00712 116 SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWS-QSERGTIVSIWNCAHNIGGGIPPL 172 (438)
T ss_pred chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcC-cccchhHHHHHHHHHHhHhHHHHH
Confidence 122223444456677666666656667778774 345689999888877776666543
No 180
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.17 E-value=5.7e-05 Score=76.62 Aligned_cols=105 Identities=10% Similarity=-0.039 Sum_probs=74.9
Q ss_pred HHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhh--cccchHHHHHHHHHHhhhhhHHHhhhhhhhccC
Q 012075 65 TALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYN--HHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSY 142 (471)
Q Consensus 65 ~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~--~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~ 142 (471)
.....+..++.++.++++||+|||+.+.++.+...+......... ..++.+.++++-++.|+|.+...+....... .
T Consensus 258 ~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~-~ 336 (406)
T PRK15402 258 VPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTL-F 336 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHh-h
Confidence 334445667789999999999999999888765543222221110 1234566778889999999887655444433 3
Q ss_pred CCCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 143 PPPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 143 ~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
.++++||+..+.+.....+|..+|+.+.
T Consensus 337 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~ 364 (406)
T PRK15402 337 SSDVSKGTVSAAMGMLSMLIFTVGIELS 364 (406)
T ss_pred hccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 4568999999999999999999998876
No 181
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.15 E-value=2.3e-05 Score=80.24 Aligned_cols=107 Identities=16% Similarity=0.163 Sum_probs=85.7
Q ss_pred HHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCC
Q 012075 64 NTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYP 143 (471)
Q Consensus 64 ~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~ 143 (471)
..+......++.+++++++||+|+|+++..+.+++.+......... .+|.+.+++.-++.|++.+..++...+.++|+.
T Consensus 266 ~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~i 344 (428)
T PF13347_consen 266 MLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLG-PGSPWLVLILFILAGIGYGAFFVIPWAMLADVI 344 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHH-hhhHHHHHHHHHHhHhhhcccccccccccccch
Confidence 3445555667778999999999999999999998876444333311 258899999999999999999999999999987
Q ss_pred C-------CCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 144 P-------PNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 144 ~-------~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
+ +++.|...|.+.....+|..+++.+..
T Consensus 345 d~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g 379 (428)
T PF13347_consen 345 DYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVG 379 (428)
T ss_pred hhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHH
Confidence 6 344688999999999999988888753
No 182
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.14 E-value=5.7e-05 Score=78.91 Aligned_cols=103 Identities=17% Similarity=0.086 Sum_probs=81.3
Q ss_pred HHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCC
Q 012075 66 ALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPP 145 (471)
Q Consensus 66 ~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~ 145 (471)
..-.+..+|+++.+.+.+++++++.+..+.+.+.+.. ...+.+++.+..+++-++.|++.....+...+.+.+..|+
T Consensus 262 ~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~---~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~ 338 (524)
T PF05977_consen 262 AFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALAL---LLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPD 338 (524)
T ss_pred HHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHH---HHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 3333344455677788888888888888887665432 2224468888888999999999999888888888899999
Q ss_pred CchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 146 NRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 146 ~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
+.|||.++++.+....+..+|.++..
T Consensus 339 ~~~GRv~si~~~~~~g~~~lGsll~G 364 (524)
T PF05977_consen 339 WVRGRVFSIYQMVFFGGMPLGSLLWG 364 (524)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988863
No 183
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.13 E-value=2.4e-05 Score=81.26 Aligned_cols=147 Identities=14% Similarity=0.023 Sum_probs=77.7
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHH----HHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHH
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVT----LISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLW 132 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~----l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~ 132 (471)
+...+...+....+..++.+++|+++||+|||+. ..+..+...+...........++.+..++.-++.|++.+...
T Consensus 287 ~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 366 (476)
T PLN00028 287 LETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAAC 366 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhh
Confidence 3444455556667777889999999999997621 111111111111111111223455555555566666655544
Q ss_pred hhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCc
Q 012075 133 AAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGR 210 (471)
Q Consensus 133 ~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~ 210 (471)
.....+..++ .+++||...|+......+|+.+++.+- .. . ...++.. .+....++.+++.++.++.+.|.+
T Consensus 367 ~~~~~~~~~~-~~~~~g~~~g~~~~~g~lg~~i~~~l~-~~--~--~~~~y~~-~f~~~~~~~~i~~~~~~~~~~~~~ 437 (476)
T PLN00028 367 GATFGIVPFV-SRRSLGVISGLTGAGGNVGAVLTQLLF-FT--G--SSYSTET-GISLMGVMIIACTLPVAFIHFPQW 437 (476)
T ss_pred hhhcccCccc-ChhhchhhhhhhhccccHHHHHHHHHH-Hh--c--CCccHhh-HHHHHHHHHHHHHHHHHheeccch
Confidence 4444455565 467999999998655555555555432 11 1 1122333 344444455555556666655544
No 184
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.10 E-value=1.6e-05 Score=79.67 Aligned_cols=113 Identities=19% Similarity=0.147 Sum_probs=77.1
Q ss_pred ccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCC
Q 012075 270 NLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSD 349 (471)
Q Consensus 270 ~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (471)
+..+.++......++..++.++.|++.|| +|||+....+...... ...... . . ++
T Consensus 24 s~~~~~~~~~~~~~~~~~~~~~~g~l~d~--~g~~~~~~~~~~~~~i-~~~~~~--~--~------------------~~ 78 (377)
T PRK11102 24 SAGSVQMTLSAYILGFAIGQLFYGPMADS--FGRKPVILGGTLVFAL-AAVACA--L--A------------------QT 78 (377)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhchHHhh--cCChHHHHHHHHHHHH-HHHHHH--H--H------------------cc
Confidence 43456667777889999999999999999 7899877666544421 111111 0 0 12
Q ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 350 FAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 350 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
+....+..++.|++.+...+....++.+.++ ++++++++++.+....++..++..+..
T Consensus 79 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~ 136 (377)
T PRK11102 79 IDQLIYMRFLHGLAAAAASVVINALMRDMFP-KEEFSRMMSFVTLVMTIAPLLAPIIGG 136 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2335566777888888888888888899884 445688898888777777777665543
No 185
>PRK10054 putative transporter; Provisional
Probab=98.09 E-value=7.1e-05 Score=75.80 Aligned_cols=94 Identities=16% Similarity=0.185 Sum_probs=73.2
Q ss_pred hchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHH
Q 012075 75 GILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISI 154 (471)
Q Consensus 75 ~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~ 154 (471)
.++.+.+.||.+||+.+..+.+.+.+....... ..++.+.++++.++.|+|.+...+....++.+.+|++.||++.+.
T Consensus 261 ~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~ 338 (395)
T PRK10054 261 QYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIF--SGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSA 338 (395)
T ss_pred hhHHHHHHccCCchhHHHHHHHHHHHHHHHHHH--cchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhH
Confidence 367789999999999998887666553322221 124667778889999999998888888899999999999999887
Q ss_pred HHHHHHhhhhhhhHHHH
Q 012075 155 FWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 155 ~~~~~~~G~~iG~~i~~ 171 (471)
.. ...+|..+||.++.
T Consensus 339 ~~-~~~~G~~~Gp~~~G 354 (395)
T PRK10054 339 QS-LGWLGAAINPLVSG 354 (395)
T ss_pred HH-HHHHHHHHHHHHHH
Confidence 65 45578999998873
No 186
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.06 E-value=3.8e-05 Score=77.51 Aligned_cols=109 Identities=11% Similarity=0.083 Sum_probs=73.1
Q ss_pred hhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchh
Q 012075 273 TRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAG 352 (471)
Q Consensus 273 ~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (471)
+.++....+.++..++.++.|++.|| +|||+.+..+..... +..... .. . +++..
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~G~l~Dr--~g~r~~l~~~~~~~~-i~~~~~----~~----~--------------~~~~~ 93 (392)
T PRK10473 39 QLHIAFSVYLAGMAAAMLFAGKIADR--SGRKPVAIPGAALFI-IASLLC----SL----A--------------ETSSL 93 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhHhHHHHH--hCChHHHHHHHHHHH-HHHHHH----HH----h--------------CcHHH
Confidence 45566667788899999999999999 899987766654332 111111 00 0 12223
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 012075 353 PFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVD 407 (471)
Q Consensus 353 ~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~ 407 (471)
..+..++.|++.+...+..+.++.|.++ +++++++.+..+...+++..++..+.
T Consensus 94 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~i~~~~~~~i~ 147 (392)
T PRK10473 94 FLAGRFLQGIGAGCCYVVAFAILRDTLD-DRRRAKVLSLLNGITCIIPVLAPVLG 147 (392)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667788887777778888888884 45668889988887777766665543
No 187
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.05 E-value=1.6e-05 Score=66.70 Aligned_cols=104 Identities=19% Similarity=0.127 Sum_probs=70.4
Q ss_pred HHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHH
Q 012075 280 FYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFC 359 (471)
Q Consensus 280 ~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (471)
...++.+++.++.+++.|| +|||+....+...... ..... . . . .+.....+..++
T Consensus 6 ~~~~~~~~~~~~~g~~~d~--~g~~~~~~~~~~~~~~-~~~~~----~-~---~--------------~~~~~~~~~~~~ 60 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDR--FGRKPVLLVGLFIFVL-STAMF----A-L---S--------------SNITVLIIARFL 60 (141)
T ss_pred eehhHHHHHHhhHHHHHhh--cchhHHHHHHHHHHHH-HHHHH----H-H---h--------------ccHHHHHHHHHH
Confidence 4567888899999999999 7899876555433311 11111 0 0 0 122234556677
Q ss_pred HHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhccc
Q 012075 360 YGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTH 409 (471)
Q Consensus 360 ~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~ 409 (471)
.++..+...+..+.++.|.++ +++++++.++.+....++..++..+...
T Consensus 61 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 109 (141)
T TIGR00880 61 QGFGAAFALVAGAALIADIYP-PEERGVALGLMSAGIALGPLLGPPLGGV 109 (141)
T ss_pred HHHHHHHHHHhHHHHHHHHCC-hhhhhHHHHHHHHhHHHHHHHhHHhHHH
Confidence 888888888888888899884 3455889999998888888887766543
No 188
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.05 E-value=9.7e-05 Score=68.95 Aligned_cols=147 Identities=18% Similarity=0.158 Sum_probs=98.5
Q ss_pred cccchhHHHHHHHHHHhhhhhhhHhh-hhc-CCCCCCChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHH
Q 012075 21 RYNSPLVQVCLIGLVCFCCPGMFNAL-SGM-GGGGQVDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTY 98 (471)
Q Consensus 21 ~~~~~~~~~~~~~~~~f~~~~~~~~~-~~l-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~ 98 (471)
-+.+++..+.+++.+..+.-.-+.++ +.+ +.....++...+...++.|+..++.+.+.|.++||+||+...+.+..+-
T Consensus 261 ~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~ 340 (459)
T KOG4686|consen 261 TFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACIL 340 (459)
T ss_pred ccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHH
Confidence 35566666666666554332222222 111 1111123445566788999999999999999999999999988887654
Q ss_pred HHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 99 VLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
.+..=+.+ .-+.+.-+.+-.+.|+..+....+--..++.+.|+++.|.+.|..++..++|..+-+++..
T Consensus 341 tl~~H~~l----~Ft~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag 409 (459)
T KOG4686|consen 341 TLLGHSGL----FFTFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAG 409 (459)
T ss_pred HHHHhhhH----HhhhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhh
Confidence 44211111 1235556788888998888754433334455668899999999999999999999999973
No 189
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.05 E-value=9.6e-05 Score=77.33 Aligned_cols=99 Identities=11% Similarity=-0.103 Sum_probs=61.4
Q ss_pred HhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhh-cccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhh
Q 012075 72 TIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYN-HHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGT 150 (471)
Q Consensus 72 ~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~-~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~ 150 (471)
.++.+++++++||+|||+.++++.++..+......... ..++...+...-+...++.....+....+.+|+.|++.||+
T Consensus 349 i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~ 428 (502)
T TIGR00887 349 VPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRST 428 (502)
T ss_pred HHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHH
Confidence 34668899999999999999888765543222211100 00111111111111111111122344566799999999999
Q ss_pred HHHHHHHHHHhhhhhhhHHH
Q 012075 151 YISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 151 ~~g~~~~~~~~G~~iG~~i~ 170 (471)
..|+.+....+|.++++.+.
T Consensus 429 ~~g~~~~~~~~~~~~~~~~~ 448 (502)
T TIGR00887 429 AHGISAASGKAGAIIGQFGF 448 (502)
T ss_pred HHHHHHHHhhhHHHHHHHHh
Confidence 99999999999999998875
No 190
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.05 E-value=4.4e-05 Score=75.35 Aligned_cols=100 Identities=11% Similarity=0.178 Sum_probs=83.2
Q ss_pred HHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCc
Q 012075 68 YTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNR 147 (471)
Q Consensus 68 ~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~ 147 (471)
.....+|++++|.+.||+|.|+++.++.+++.+ .+... ........+.+...+.|+..|..+...=+|.++..|+++
T Consensus 298 ~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~--~~~~~-~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k 374 (438)
T COG2270 298 SVVAALGAIIAGFLDERFGSKPVLMIGLVILSI--AALYL-IFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK 374 (438)
T ss_pred HHHHHHHHHHHHHHHHHhCCceeehHHHHHHHH--HHHHH-HHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc
Confidence 344578899999999999999999999987765 22221 123345556778899999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhhhhhHHH
Q 012075 148 KGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 148 RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
-|+.+|+|...-...+.+||+.-
T Consensus 375 ~~~fFglyaltgra~S~~gp~lv 397 (438)
T COG2270 375 EGRFFGLYALTGRAASFLGPFLV 397 (438)
T ss_pred ccceeehhhhhhhHHHHHHHHHH
Confidence 99999999999999999999875
No 191
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.05 E-value=8e-05 Score=74.03 Aligned_cols=110 Identities=10% Similarity=0.066 Sum_probs=74.5
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhcc-chhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNIL-GPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
+...+...+....+..+++++.|++.||+ +||+.+.++.+...+....... .++.+... .-++.|++.+...+..
T Consensus 231 ~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~l~g~~~g~~~~~~ 306 (355)
T TIGR00896 231 AATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLF---APMHGLWA-WALVLGLGQGGAFPLA 306 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHH---hhhhHHHH-HHHHHHHhhhhHhHHH
Confidence 44445556666777788899999999999 5677777766655443222221 22222222 4567899998877665
Q ss_pred hhhhcc-CCCCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 136 GAIMTS-YPPPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 136 ~~~i~~-~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
...+.+ ..+++++|...++.+....+|..+||.+.
T Consensus 307 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~ 342 (355)
T TIGR00896 307 LTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFV 342 (355)
T ss_pred HHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555544 44567789999998888888888898876
No 192
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.03 E-value=8.9e-05 Score=76.33 Aligned_cols=169 Identities=13% Similarity=0.087 Sum_probs=89.4
Q ss_pred ccchhhhHHHHHHHHHHHHhhhhhhhccc--CCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCC
Q 012075 270 NLRTRGLNNVFYWGAQMLGSVGIGYIFDF--SFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSG 347 (471)
Q Consensus 270 ~~~~~~l~~~~~~i~~i~g~~~~g~l~D~--~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (471)
+....++......+..++..++.|.++|| .|+|||+..+.+......+.+.... +....... ...+.....
T Consensus 37 ~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~----~~~~~~~~---~~~~~~~~~ 109 (477)
T TIGR01301 37 PHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIG----FAADIGHL---FGDNLDKKT 109 (477)
T ss_pred CHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHH----hCchhhhh---ccccccccc
Confidence 33445667777888899999999999996 2489999876542222122222111 11000000 000000000
Q ss_pred CCch--hHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CchhhhHHHHHHHHHHHHHHHHHhhhcccC-----chhhH----
Q 012075 348 SDFA--GPFVLYFCYGLLDAMFQSMVYWVIGALAD-DSETLSRYSGFYKGVQSAGAAVAWQVDTHK-----VSLLS---- 415 (471)
Q Consensus 348 ~~~~--~~~~~~~~~g~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~s~g~~i~~~~~~~~-----~p~~~---- 415 (471)
..+. ..++...+..+.....++..-++++|+.+ +.|++..+.+..+.+.++|..+++.+.... .|..+
T Consensus 110 ~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~ 189 (477)
T TIGR01301 110 KPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEAC 189 (477)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccccc
Confidence 1111 11222223334444555666778899884 444446788888888899999998865421 11110
Q ss_pred -----HHHHHHHHHHhhhhhhhheeeeeeccCCCc
Q 012075 416 -----QLVVNWSLTTISYPLLVILVLLAVKDEKSP 445 (471)
Q Consensus 416 -----~~~~~~~~~~~~~~~~i~~~~~~~pet~~~ 445 (471)
++-..+.+-++.++.++.+..+.+||+...
T Consensus 190 ~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~ 224 (477)
T TIGR01301 190 GVSCANLKSCFLIDIILLAILTYIALSAVKENPLI 224 (477)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCC
Confidence 111222232333445556677888998543
No 193
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.02 E-value=1.6e-05 Score=77.62 Aligned_cols=148 Identities=16% Similarity=0.094 Sum_probs=106.0
Q ss_pred hhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchh
Q 012075 273 TRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAG 352 (471)
Q Consensus 273 ~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (471)
+.++......+.+++.+++.|.+.|| +|+|..+++|..+|. ...++++ + . ..|..
T Consensus 107 ~iG~LFaskA~~qllvnp~~G~l~~~--iGy~ipm~~Gl~vmf-~sTilFa----f----g--------------~sy~~ 161 (464)
T KOG3764|consen 107 QIGLLFASKALVQLLVNPFFGNLIDR--IGYKIPMVAGLFVMF-LSTILFA----F----G--------------NSYPM 161 (464)
T ss_pred chhHHHHHHHHHHHHhcccchhhHHH--hccccHHHHHHHHHH-HHHHHHH----H----c--------------chhHH
Confidence 46788888999999999999999998 899999988887773 2223322 1 1 23445
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccCchhhHHHHHHHHHHHhhhhhhh
Q 012075 353 PFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTHKVSLLSQLVVNWSLTTISYPLLV 432 (471)
Q Consensus 353 ~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~i 432 (471)
.++.=.+.|+++++..+.-..++.+.|++..+|++++|+.-.+.++|..++.-++.+..-.... ...+.+.++.+++-.
T Consensus 162 l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk-~aPFlVL~~v~Lld~ 240 (464)
T KOG3764|consen 162 LFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGK-SAPFLVLAIVLLLDG 240 (464)
T ss_pred HHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCC-cCcHHHHHHHHHHHH
Confidence 6777779999999999998899999996556679999888877777777776666543211111 245555555555666
Q ss_pred heeeeeeccCCCcc
Q 012075 433 ILVLLAVKDEKSPE 446 (471)
Q Consensus 433 ~~~~~~~pet~~~~ 446 (471)
...++.++.|+.+|
T Consensus 241 ~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 241 ALQLLVIEPTEMDP 254 (464)
T ss_pred HHHHheeCccccCc
Confidence 66767777776665
No 194
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.98 E-value=0.0002 Score=72.19 Aligned_cols=102 Identities=17% Similarity=0.032 Sum_probs=68.5
Q ss_pred HHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHh-hh--cccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCC-
Q 012075 70 TFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLY-YN--HHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPP- 145 (471)
Q Consensus 70 ~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~-~~--~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~- 145 (471)
...++.++.|++.||+|+|+.+.++.+........... .. ..++.+.++..-++.+++.+...++......+..++
T Consensus 256 ~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 335 (390)
T TIGR02718 256 TVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDG 335 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 33456789999999999999988876544221111111 00 013334445555566666676655555565555555
Q ss_pred CchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 146 NRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 146 ~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
+++|+.++++++..++|..+||.++.
T Consensus 336 ~~~g~~~~~~~~~~~lg~~~g~~~~G 361 (390)
T TIGR02718 336 DQAGTDVTAVQSTRDLGELIASSIAG 361 (390)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999973
No 195
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.97 E-value=2.5e-05 Score=75.46 Aligned_cols=94 Identities=14% Similarity=0.129 Sum_probs=74.4
Q ss_pred HhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchH--HHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchh
Q 012075 72 TIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQA--FAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKG 149 (471)
Q Consensus 72 ~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~--~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG 149 (471)
.-|.++.+.+.||+|||++|..+.+++.+|...... ....|.. .+..+|++. +....++.+|..|+.|.+.|+
T Consensus 395 fPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~-c~~rn~~tvllf~arafi----sg~fqvaYvYtPEVyPTavRa 469 (528)
T KOG0253|consen 395 FPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTT-CKTRNAYTVLLFTARAFI----SGAFQVAYVYTPEVYPTAVRA 469 (528)
T ss_pred CCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHH-hcCcchhHHHHHHHHHHH----hchheEEEEecCcccchhhhh
Confidence 345689999999999999999999988887655433 1233332 456677664 334456788999999999999
Q ss_pred hHHHHHHHHHHhhhhhhhHHH
Q 012075 150 TYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 150 ~~~g~~~~~~~~G~~iG~~i~ 170 (471)
...|.-..+..+|.++.|.|+
T Consensus 470 tgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred cchhhhhhHHhhhhhhhhHHH
Confidence 999999999999999999998
No 196
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.97 E-value=1.4e-05 Score=78.67 Aligned_cols=113 Identities=14% Similarity=0.129 Sum_probs=75.1
Q ss_pred cccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCC
Q 012075 269 FNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGS 348 (471)
Q Consensus 269 ~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (471)
++..+.+.....+.+..=++=.+.|.++|| .+-|..+-.|.+..+++. +.+ ... +
T Consensus 61 lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr--~npr~fm~~gLilsai~n-il~-------------------Gfs---~ 115 (448)
T COG2271 61 LSKTQLGILGSAFSITYGVSKFVMGVLSDR--SNPRYFMAFGLILSAIVN-ILF-------------------GFS---P 115 (448)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhhccc--CCCceeehHHHHHHHHHH-HHH-------------------hhh---h
Confidence 555555555444444444555556789999 555554444443332111 111 111 2
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 012075 349 DFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVD 407 (471)
Q Consensus 349 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~ 407 (471)
+.....++..+.|++.+...|.+.-.+...|++. ||++..++.|..+++|.++...+.
T Consensus 116 s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~-eRG~~~siWn~shNiGGal~~~~~ 173 (448)
T COG2271 116 SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRK-ERGTWWSIWNTSHNIGGALAPLVA 173 (448)
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCcc-ccCceEEEehhhhhcccchHHHHH
Confidence 3455677888999999999999999999999543 569999999999999999988765
No 197
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.96 E-value=3.8e-06 Score=83.47 Aligned_cols=115 Identities=21% Similarity=0.217 Sum_probs=89.6
Q ss_pred ccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCC
Q 012075 270 NLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSD 349 (471)
Q Consensus 270 ~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (471)
+....++....+.++..++++++|++.|| ..|++++.+|..+...+.++. ++. ..
T Consensus 66 ~~s~~Gll~~vf~v~~~i~sPl~gyLadr--yNR~~v~~vG~~iW~~Av~~~---~fs--------------------~~ 120 (493)
T KOG1330|consen 66 SDSELGLLQTVFIVVFMIASPLFGYLADR--YNRKRVIAVGIFIWTLAVFAS---GFS--------------------NH 120 (493)
T ss_pred CchhccchhHHHHHHHHHHHHHHHHHHhh--cCcceEEeeHHHHHHHHHHHH---HHH--------------------HH
Confidence 33456788888899999999999999999 789998888866553222211 110 12
Q ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccC
Q 012075 350 FAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTHK 410 (471)
Q Consensus 350 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~~ 410 (471)
++...++=.+.|++.+.+.+....++++.|++. ++++.++++++....|..++|.++...
T Consensus 121 Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~-~Rs~~~~ify~~ipvGsglG~vvgs~v 180 (493)
T KOG1330|consen 121 FWQVLLCRGFVGIGEASYSPIAPSLIADSFPDD-KRSRVLGIFYFAIPVGSGLGYVVGSVV 180 (493)
T ss_pred HHHHHHHHHHhccchhhhcccchhHhhhcCcch-hhhHHHHHhhhhcccccceeEEeeeee
Confidence 455677788899999999999999999999544 458999999999999999999987643
No 198
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.96 E-value=4.4e-05 Score=77.82 Aligned_cols=110 Identities=11% Similarity=0.051 Sum_probs=70.8
Q ss_pred hhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchh
Q 012075 273 TRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAG 352 (471)
Q Consensus 273 ~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (471)
..+.....+.++..++.++.|.++|| +|||+....+..+.. ++.... .. . +++..
T Consensus 52 ~~~~~~s~~~~~~~~~~~~~G~l~dr--~Grr~~l~~~~~~~~-~~~~~~----~~---------------a---~~~~~ 106 (413)
T PRK15403 52 LAPASVSLYLAGGMALQWLLGPLSDR--IGRRPVLITGALIFT-LACAAT----LF---------------T---TSMTQ 106 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHH--cCchHHHHHHHHHHH-HHHHHH----HH---------------c---CCHHH
Confidence 34445556678888889999999999 899997766644331 111111 00 0 22333
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 353 PFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 353 ~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
..+.-++.|++.+...+..+.++.|.++ +++++++++......+++..++..+..
T Consensus 107 l~~~r~l~Gi~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~lg~ 161 (413)
T PRK15403 107 FLIARFIQGTSICFIATVGYVTVQEAFG-QTKGIKLMAIITSIVLVAPIIGPLSGA 161 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555566777776555666677788884 345578888888887788877766654
No 199
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=97.95 E-value=8.8e-05 Score=85.58 Aligned_cols=109 Identities=14% Similarity=0.017 Sum_probs=85.8
Q ss_pred hhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhh
Q 012075 60 ANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIM 139 (471)
Q Consensus 60 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i 139 (471)
.+...+....+..+++++++.+.||+++|+.+.++.++..+...... ..++.+.++++-++.|++.+...+...+++
T Consensus 271 ~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 347 (1146)
T PRK08633 271 VQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLP---TAPSLASVLVLFFLFGFSAGLFIVPLNALI 347 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHH---HhhhHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 34444445555667789999999999999988888776554332222 245777888889999999999888888899
Q ss_pred ccCCCCCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 140 TSYPPPNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 140 ~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
.+..|+++||+.+|+......+|.++++.++.
T Consensus 348 ~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~ 379 (1146)
T PRK08633 348 QFRAPEKELGKVLAANNFLQNVGMLLFLALTT 379 (1146)
T ss_pred hhcCCccchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888877764
No 200
>PRK11043 putative transporter; Provisional
Probab=97.95 E-value=0.00031 Score=71.09 Aligned_cols=105 Identities=10% Similarity=0.011 Sum_probs=69.9
Q ss_pred HHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhh--cccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCC
Q 012075 68 YTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYN--HHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPP 145 (471)
Q Consensus 68 ~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~--~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~ 145 (471)
..+..++.++.+.+.||+|||+.+....+...+.....+... ..++.+.+++.-.+.|++.+...+....+..|.. |
T Consensus 248 ~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 326 (401)
T PRK11043 248 TIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPF-P 326 (401)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-c
Confidence 345566778889999999999877655544333222221111 1244555666677888888887776666666654 5
Q ss_pred CchhhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 146 NRKGTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 146 ~~RG~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
++||++.|++......+...++.+...+
T Consensus 327 ~~~g~~~g~~~~~~~~~~~~~~~~~g~l 354 (401)
T PRK11043 327 QATGKAAALQNTLQLGLCFLASLLVSAL 354 (401)
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 6899999999988777777776665333
No 201
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.94 E-value=0.00023 Score=73.84 Aligned_cols=102 Identities=17% Similarity=0.199 Sum_probs=75.2
Q ss_pred HHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhh--hcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCC--
Q 012075 69 TTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYY--NHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPP-- 144 (471)
Q Consensus 69 ~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~--~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~-- 144 (471)
....++.+++++++||+|+|+.+.++.++.++........ ...++.+.+++.-++.|++.+..++...++++|..|
T Consensus 277 i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~ 356 (473)
T PRK10429 277 AANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYG 356 (473)
T ss_pred HHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 3445566889999999999999988887554422222211 113456677788889999999999888899999866
Q ss_pred -----CCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 145 -----PNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 145 -----~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
.++.|..+|.......+|..+|+.+.
T Consensus 357 e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~ 387 (473)
T PRK10429 357 EYKLGIRCESIAYSVQTMVVKGGSAFAAFFI 387 (473)
T ss_pred hHhcCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 33456688998888889998888775
No 202
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.93 E-value=0.00055 Score=69.53 Aligned_cols=148 Identities=18% Similarity=0.106 Sum_probs=95.8
Q ss_pred ccchhHHHHHHHHHHhhhhhhhHhhhhcCCC-CCCChhh-hhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHH
Q 012075 22 YNSPLVQVCLIGLVCFCCPGMFNALSGMGGG-GQVDTTA-ANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYV 99 (471)
Q Consensus 22 ~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~-~~~~~~~-~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~ 99 (471)
.+|++..+.+..++.++.+...++....-.. ....+++ ....+........++.++++++.+|+|+|+.+.++.+.++
T Consensus 234 ~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~ 313 (467)
T COG2211 234 KNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLA 313 (467)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHH
Confidence 5566666666555555444322222111111 1112222 2222222333333446899999999999999999999887
Q ss_pred HHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCC-------CCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 100 LYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPP-------PNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 100 ~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~-------~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
+.....+... .++.+.+++..++.++|.+...+..-+.++|..+ .+.-|...+.+....-+|..+|..+.
T Consensus 314 i~~~~~~f~~-~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~ 390 (467)
T COG2211 314 VGYLLLYFTP-AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIP 390 (467)
T ss_pred HHHHHHHhhc-CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence 7555544422 5678899999999999999988888888888765 34457777887778888888887553
No 203
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.92 E-value=0.0085 Score=60.00 Aligned_cols=130 Identities=17% Similarity=0.089 Sum_probs=89.2
Q ss_pred hhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHH
Q 012075 74 FGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYIS 153 (471)
Q Consensus 74 ~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g 153 (471)
.-+....+.|.+|.|++++++.+..++.-...+. .++.+.+-+.-++-|++.+. -++-.+|+=...|+++--|+++
T Consensus 57 ~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~---~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts 132 (412)
T PF01770_consen 57 FLLPVFLLTDYLRYKPVIILQALSYIITWLLLLF---GTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTS 132 (412)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH---HCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHH
Confidence 4466788999999999999999886553322333 58899999999999999887 3455667666668888888999
Q ss_pred HHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCc
Q 012075 154 IFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGR 210 (471)
Q Consensus 154 ~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~ 210 (471)
.-.+...+|..+|.+++..+..... .+.....++. .....++.+..+++.+|++
T Consensus 133 ~~raa~l~g~~~s~~lgQllvs~~~--~sy~~L~~is-l~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 133 YTRAATLVGRFISSLLGQLLVSFGG--VSYFQLNYIS-LASVSLALLIALFLPMPKR 186 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC--CCHHHHHHHH-HHHHHHHHHHHHHcCCCCc
Confidence 9989999999988888754432110 1111122222 2345556666677755543
No 204
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.92 E-value=7.1e-05 Score=74.40 Aligned_cols=114 Identities=17% Similarity=0.080 Sum_probs=72.1
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccc-hhH-HHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILG-PQV-TLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~G-rk~-~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
+...+...+.......++.++.+++.||.+ ||+ .+.....................+.+..++..++.|+......+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 330 (379)
T TIGR00881 251 KEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQML 330 (379)
T ss_pred HHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHH
Confidence 334444455555666678899999999864 333 222221111110111111111234455666777777766555555
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
...+..|..|+++||+..|+++....+|..+|+.+.
T Consensus 331 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 366 (379)
T TIGR00881 331 IGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPL 366 (379)
T ss_pred HHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhH
Confidence 667888999999999999999999999999999886
No 205
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.92 E-value=0.00011 Score=73.53 Aligned_cols=137 Identities=14% Similarity=0.042 Sum_probs=92.7
Q ss_pred HHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccC
Q 012075 63 ANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSY 142 (471)
Q Consensus 63 ~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~ 142 (471)
..++-....++.=.+.+++.+|+|.|+.++++.++..+=.... +.+++.+.+.+.+.++|+-.+....+.--|+++.
T Consensus 264 l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~---~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~ 340 (412)
T PF01306_consen 264 LWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGS---GFATNPWVISLIKLLHALEFPLLLVAAFKYITAH 340 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH---HT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHH---hhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444444455555789999999999999999998876643332 3478999999999999999999999999999999
Q ss_pred CCCCchhhHHHH-HHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccC
Q 012075 143 PPPNRKGTYISI-FWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILP 207 (471)
Q Consensus 143 ~~~~~RG~~~g~-~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~ 207 (471)
.|+|..++...+ ++...++|..+.+.+. |..++. -+. ...|++...+.....++..+..+
T Consensus 341 fd~rlsAt~y~v~~~~~~~~~~~i~s~~~-G~lyd~---~G~-~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 341 FDKRLSATLYLVGFQFAKQIGIIILSPLA-GYLYDR---IGF-QHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp S-GGGHHHHHHHHHTTTHHHHHHHHHHHH-HHHHHH---HHH-HHHHHHHHHHHHHHHHHHHHHS-
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHHhhhH-HhhHhh---cCc-HHHHHHHHHHHHHHHHHheeeec
Confidence 999887777666 4566677777666654 333321 111 23465555555555555555544
No 206
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=97.90 E-value=0.00055 Score=68.06 Aligned_cols=97 Identities=21% Similarity=0.201 Sum_probs=70.6
Q ss_pred HHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhh
Q 012075 71 FTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGT 150 (471)
Q Consensus 71 ~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~ 150 (471)
..+|+++.|.+.|| +.|+.+....+...+....+.. ..++.+..++.-++.|++.+..-..-..-+++ ..|+.++.
T Consensus 260 ~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~--~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~ 335 (394)
T COG2814 260 GFIGNLLGGRLADR-GPRRALIAALLLLALALLALTF--TGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADL 335 (394)
T ss_pred HHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHH--hcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHH
Confidence 45778999999999 8888888886655443333222 24566677777777777777654443444444 34889999
Q ss_pred HHHHHHHHHHhhhhhhhHHHH
Q 012075 151 YISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 151 ~~g~~~~~~~~G~~iG~~i~~ 171 (471)
..+++...+|+|..+|.+++.
T Consensus 336 a~sl~~aa~nlgia~GA~lGG 356 (394)
T COG2814 336 AGSLNVAAFNLGIALGAALGG 356 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999983
No 207
>PRK10091 MFS transport protein AraJ; Provisional
Probab=97.88 E-value=0.00029 Score=70.87 Aligned_cols=110 Identities=15% Similarity=0.041 Sum_probs=69.2
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh-h
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA-E 135 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~-~ 135 (471)
+...+...+....+..++.++.+++.||+|+|+.+.++..+..+....... ..++.+..++..++.++|.....+. .
T Consensus 234 ~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~ 311 (382)
T PRK10091 234 ETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFF--FGGMKTASLIFAFICCAGLFALSAPLQ 311 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHhhhHHHH
Confidence 334444455555667788899999999999999998887655442222111 1244555566666667665544332 3
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
.....+..+++.+|... .+....+|..+||.+.
T Consensus 312 ~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~ 344 (382)
T PRK10091 312 ILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCG 344 (382)
T ss_pred HHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHh
Confidence 33444444555666543 4667789999999987
No 208
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.88 E-value=0.00033 Score=65.64 Aligned_cols=95 Identities=20% Similarity=0.184 Sum_probs=68.0
Q ss_pred hchhhhhhhccchhHHHHHHHHHHHHHHHHHHhh-h-c--ccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhh
Q 012075 75 GILGGGIYNILGPQVTLISACSTYVLYAGSFLYY-N-H--HKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGT 150 (471)
Q Consensus 75 ~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~-~-~--~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~ 150 (471)
+++.|.+.|++|+|.++.+|.+...+.-...+.. . . ..+.|.+.+..++.|.+.+...++.-....+++| ++||+
T Consensus 53 G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~ 131 (250)
T PF06813_consen 53 GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGT 131 (250)
T ss_pred cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCc
Confidence 4889999999999999999987543322222221 1 1 2467888888888888877766666666667765 68999
Q ss_pred HHHHHHHHHHhhhhhhhHHH
Q 012075 151 YISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 151 ~~g~~~~~~~~G~~iG~~i~ 170 (471)
+.|+.-....++..+=..+.
T Consensus 132 vvgilk~~~GLSaai~t~i~ 151 (250)
T PF06813_consen 132 VVGILKGFFGLSAAIFTQIY 151 (250)
T ss_pred eehhhhHHHHhHHHHHHHHH
Confidence 99999988888776544443
No 209
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.85 E-value=0.0001 Score=74.45 Aligned_cols=111 Identities=14% Similarity=0.007 Sum_probs=67.4
Q ss_pred ccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCC
Q 012075 270 NLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSD 349 (471)
Q Consensus 270 ~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (471)
+..+.++....+.++..++.++.|++.|| +|||+....+..... +..... . . . ++
T Consensus 41 s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr--~grr~~~~~~~~~~~-~~~~~~----~-~---~--------------~~ 95 (394)
T PRK11652 41 REGAVQAVMAAYLLTYGLSQLFYGPLSDR--VGRRPVILVGMSIFI-LGTLVA----L-F---A--------------HS 95 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhHHHh--cCChHHHHHHHHHHH-HHHHHH----H-H---H--------------cc
Confidence 44455667777889999999999999999 899997766544331 111111 0 0 0 12
Q ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhh
Q 012075 350 FAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQV 406 (471)
Q Consensus 350 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~ 406 (471)
+....+..++.|++.+...+....+..+.+++ ++++++.+..+....++..++..+
T Consensus 96 ~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~i 151 (394)
T PRK11652 96 LTVLIAASAIQGLGTGVGGVMARTLPRDLYEG-TQLRHANSLLNMGILVSPLLAPLI 151 (394)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345556667777766666666677777633 344666666655555444444443
No 210
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.80 E-value=0.00067 Score=66.26 Aligned_cols=109 Identities=11% Similarity=0.053 Sum_probs=74.9
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++.......+....++.+|.++.+++.||+|+|+.+.++.++-++....... .++... ..+=++.|++.+..++..
T Consensus 176 s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~---~~~~~~-~~~~~l~g~~~s~i~P~~ 251 (310)
T TIGR01272 176 PEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAAL---THGYVA-MWFVLALGLFNSIMFPTI 251 (310)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH---cCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 3555566677778888899999999999999999888877655443222211 233322 234557899999988887
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
-+...+..| ++.+++.++. .+-.+|..++|.+.
T Consensus 252 ~s~a~~~~~-~~~~~asai~-~~~~~Gg~i~P~l~ 284 (310)
T TIGR01272 252 FSLALNALG-RHTSQGSGIL-CLAIVGGAIVPLLQ 284 (310)
T ss_pred HHHHHhhhh-hhhhhhHHHH-HHHHhcchHHHHHH
Confidence 766666544 3456677775 45668888888764
No 211
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=97.80 E-value=0.0005 Score=69.53 Aligned_cols=111 Identities=9% Similarity=-0.071 Sum_probs=79.4
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEG 136 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~ 136 (471)
+...+...+....+..+++++.+++.||.++|+.+..+.+. .+ ..... ...++.+..++.-++.|++.+...+...
T Consensus 240 ~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~-~~--~~~~~-~~~~~~~~~~~~~~~~G~~~g~~~~~~~ 315 (393)
T PRK11195 240 LNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM-GL--VVLLM-ALQHSLLPAYPLLILIGALGGFFVVPMN 315 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH-HH--HHHHH-HHHhHHHHHHHHHHHHHHhhhhhhhhHH
Confidence 33444445555566677888999999999999888777532 22 11111 2235666677788899999988776666
Q ss_pred hhhccCCCCCc-hhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 137 AIMTSYPPPNR-KGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 137 ~~i~~~~~~~~-RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
+.+.+..|+|+ +|+..++.+...++|..+|..+..
T Consensus 316 ~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~ 351 (393)
T PRK11195 316 ALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYS 351 (393)
T ss_pred HHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHH
Confidence 77777766655 799999999999999999988764
No 212
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.75 E-value=4.5e-05 Score=78.95 Aligned_cols=113 Identities=14% Similarity=0.100 Sum_probs=78.5
Q ss_pred chhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCch
Q 012075 272 RTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFA 351 (471)
Q Consensus 272 ~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (471)
.+.++....+.++.+++.++.|++.|| +|||+.+..+.++..+.. .... .. . . ..+.
T Consensus 76 ~~~g~~~s~~~~~~~~~~~~~g~l~dr--~g~r~~l~~~~~~~~~~~-~~~~--~~-~--------------~---~~~~ 132 (465)
T TIGR00894 76 ALQGLILSSHFYGQIIIQIPVGYLAGK--YVFKWSIGIGMFLSSVIS-IVIP--WA-A--------------G---GGIA 132 (465)
T ss_pred HHhhHHHHHHHHHHHHHHcchHHHHHH--hCcchhhHHHHHHHHHHH-HHHH--HH-H--------------H---cCch
Confidence 345667777889999999999999999 899987766544332111 1110 00 0 0 1223
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 352 GPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 352 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
..++.-++.|++.+...+....++++.++ +++++++.++......+|..++..+..
T Consensus 133 ~l~~~r~~~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~i~~~l~~ 188 (465)
T TIGR00894 133 LVVFCRVIQGLAQGSVSPATHKIIVKWAP-PKERSRLLGMSTSGFQLGTFIFLPISG 188 (465)
T ss_pred HHHHHHHHHHHhcccchhhHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666778899988888888888999984 456689999988877888887776543
No 213
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.75 E-value=0.0011 Score=66.94 Aligned_cols=100 Identities=14% Similarity=0.031 Sum_probs=69.3
Q ss_pred HHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCch
Q 012075 69 TTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRK 148 (471)
Q Consensus 69 ~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~R 148 (471)
.+..++.++.+.+.||.+ |+.++.+.++..+.. .......++.+.+++..++.|++.+...+...+++.+..| +++
T Consensus 263 ~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~ 338 (394)
T PRK10213 263 IASFVGTSLSSFILKRSV-KLALAGAPLVLAVSA--LVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQA 338 (394)
T ss_pred HHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHH--HHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccH
Confidence 344566788899999954 444444444332211 1111113567788889999999999888877877877765 567
Q ss_pred hhHHHHHHHHHHhhhhhhhHHHHH
Q 012075 149 GTYISIFWSIFNMGGVIGGLIPFI 172 (471)
Q Consensus 149 G~~~g~~~~~~~~G~~iG~~i~~~ 172 (471)
++..+++....++|..+|+.++..
T Consensus 339 ~~~~~~~~~~~~lg~~~G~~l~G~ 362 (394)
T PRK10213 339 EKAGSIQVAVIQLANTCGAAIGGY 362 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788888888889999999998733
No 214
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.74 E-value=0.00044 Score=70.38 Aligned_cols=116 Identities=11% Similarity=0.124 Sum_probs=81.6
Q ss_pred ccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCC
Q 012075 270 NLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSD 349 (471)
Q Consensus 270 ~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (471)
+..+.++......++..++++..|++.|| +|||+....+..++. ++.+.+. . . . .. .+
T Consensus 36 s~~~~g~l~s~~~~g~~i~~~~~g~l~~r--~G~r~~~~~g~~l~~-~g~~l~~--~--~------------~-~~--~~ 93 (410)
T TIGR00885 36 TAFQAALVQSAFYGGYFIMAIPAAIFMKK--LSYKAGILLGLFLYA-LGAFLFW--P--A------------A-EI--MN 93 (410)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCchHHHHHHHHHHH-HHHHHHH--H--H------------H-hh--cc
Confidence 33456777788899999999999999999 899998877765552 2222211 0 0 0 01 23
Q ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 350 FAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 350 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
+...++..++.|++.+..++....++.+..+ ++++++..++.+...++|..++..+.+
T Consensus 94 ~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~lG~~~g~~i~~ 151 (410)
T TIGR00885 94 YTLFLVGLFILTAGLGFLETAANPYILVMGP-ESTATRRLNLAQSFNPFGSIIGMVVAQ 151 (410)
T ss_pred HHHHHHHHHHHHhhHHHHHhhhhHHHHHHCC-HhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445666677888888888877777877763 344578889999999999998877654
No 215
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.73 E-value=0.00028 Score=81.42 Aligned_cols=117 Identities=12% Similarity=0.016 Sum_probs=87.1
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhh-----------------hcccchHHHHH
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYY-----------------NHHKHQAFAIA 119 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~-----------------~~~~~~~~li~ 119 (471)
+...+...+....+..++.++.+.++++.++++.+..+.++..+........ ...++.+.+++
T Consensus 260 ~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (1140)
T PRK06814 260 ENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILI 339 (1140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHH
Confidence 3444555566667778888999999988887766655554443322211110 01256778888
Q ss_pred HHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 120 AGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 120 ~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
+-++.|++.+...+...+++.+.+|+++||+.+|.++...++|..+|+++...+
T Consensus 340 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l 393 (1140)
T PRK06814 340 DLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALL 393 (1140)
T ss_pred HHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888899999999999999999999999999999999886333
No 216
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.73 E-value=0.00046 Score=70.66 Aligned_cols=136 Identities=13% Similarity=0.015 Sum_probs=75.8
Q ss_pred HHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhc-cc-c-hHH---HHHHHHHHhhhhhHH-Hhhhhhhhcc
Q 012075 69 TTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNH-HK-H-QAF---AIAAGAILGIGAGLL-WAAEGAIMTS 141 (471)
Q Consensus 69 ~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~-~~-~-~~~---li~~r~l~G~g~g~~-~~~~~~~i~~ 141 (471)
....+..+.++.+.||+|||+.++++..+..+.......... .. . .|. .+++-++..++.+.. -+...-+.+|
T Consensus 316 ~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aE 395 (485)
T KOG0569|consen 316 IVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAE 395 (485)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHH
Confidence 334456788999999999999999998765443222111000 11 1 221 233333333333322 2345677899
Q ss_pred CCCCCchhhHHHHHHHHHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCCc
Q 012075 142 YPPPNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPGR 210 (471)
Q Consensus 142 ~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~~ 210 (471)
.+|++.|..++++-.+..-+..++=...-.-+.. .+....++.|.+..++..+..+...|+.+
T Consensus 396 Lf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~------~~g~~~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 396 LFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQN------VIGPYVFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred hCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhcchhhHHHHHHHHHHHHHHHHhCcccC
Confidence 9999999999988776665555432221111111 12224456666666655555555556543
No 217
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.71 E-value=0.0009 Score=67.82 Aligned_cols=97 Identities=15% Similarity=0.076 Sum_probs=58.9
Q ss_pred HHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcc-cchHHHHHHH----HHHhhhhhHHHhhhhhhhccCCC
Q 012075 70 TFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHH-KHQAFAIAAG----AILGIGAGLLWAAEGAIMTSYPP 144 (471)
Q Consensus 70 ~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~-~~~~~li~~r----~l~G~g~g~~~~~~~~~i~~~~~ 144 (471)
...++.++++++.||+|||+.+.++.++..+........+.. ++.+.++++- +..|++.+...+....++.+..|
T Consensus 258 ~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 337 (402)
T PRK11902 258 ATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFS 337 (402)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 356778999999999999998887776554432222221222 3455554444 45566666666667777777666
Q ss_pred CCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 145 PNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 145 ~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
.++++ ++.....+|..+++.++
T Consensus 338 ~~~~~----~~~~~~~l~~~~~~~~~ 359 (402)
T PRK11902 338 ATQYA----LLSALASVGRVYVGPTS 359 (402)
T ss_pred HHHHH----HHHHHHHHHHHHHHHHH
Confidence 55554 44444456665444444
No 218
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.70 E-value=0.00031 Score=66.67 Aligned_cols=109 Identities=17% Similarity=0.240 Sum_probs=83.9
Q ss_pred hhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhccc--chHHHHHHHHHHhhhhhHHHhhhhh
Q 012075 60 ANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHK--HQAFAIAAGAILGIGAGLLWAAEGA 137 (471)
Q Consensus 60 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~--~~~~li~~r~l~G~g~g~~~~~~~~ 137 (471)
.....+.......+++++.|.+.||+|||+.+..+...+.+..... .... +.+.+++.|++.|++.+...+....
T Consensus 41 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 117 (338)
T COG0477 41 YGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLL---ALAPNVGLALLLILRLLQGLGGGGLLPVASA 117 (338)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHH---HhCccchHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 3445555666666777999999999999988888876533321111 1223 4789999999999999999999999
Q ss_pred hhccCCCC-CchhhHHHHHHH-HHHhhhhhhhHHHH
Q 012075 138 IMTSYPPP-NRKGTYISIFWS-IFNMGGVIGGLIPF 171 (471)
Q Consensus 138 ~i~~~~~~-~~RG~~~g~~~~-~~~~G~~iG~~i~~ 171 (471)
++.|..|+ ++|+...+.... ....|.++++.++.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T COG0477 118 LLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAG 153 (338)
T ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999887 789999999888 57888888886653
No 219
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.69 E-value=0.00024 Score=72.02 Aligned_cols=94 Identities=23% Similarity=0.381 Sum_probs=78.8
Q ss_pred hhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHH
Q 012075 74 FGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYIS 153 (471)
Q Consensus 74 ~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g 153 (471)
.=++.+++.+|+|+-+++.++..++.+ =+++.+..+|.|+.+..-+++|+..+..|.+..+|++..+||+.|..+.+
T Consensus 422 ~~ffs~klI~kiGHv~v~~lgLa~~~~---Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~ 498 (618)
T KOG3762|consen 422 FYFFSFKLIEKIGHVNVMYLGLACNVG---RFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQG 498 (618)
T ss_pred HHHHHHHHHHHhcccceeeehhhHHHH---HHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHH
Confidence 336788999999999999999887653 23333446899999999999999999999999999999999999999999
Q ss_pred HHHHHH-HhhhhhhhHHH
Q 012075 154 IFWSIF-NMGGVIGGLIP 170 (471)
Q Consensus 154 ~~~~~~-~~G~~iG~~i~ 170 (471)
+.+... .+|--+|.+|+
T Consensus 499 l~~g~f~GlG~g~GslIG 516 (618)
T KOG3762|consen 499 LLQGIFHGLGKGLGSLIG 516 (618)
T ss_pred HHHHHhcccCcchhhhhh
Confidence 988654 46667777776
No 220
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.64 E-value=0.00046 Score=71.56 Aligned_cols=117 Identities=12% Similarity=0.074 Sum_probs=86.4
Q ss_pred hhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhh----h---cccchHHHHHHHHHHhhhhh
Q 012075 57 TTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYY----N---HHKHQAFAIAAGAILGIGAG 129 (471)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~----~---~~~~~~~li~~r~l~G~g~g 129 (471)
+...+...+..-.+..++..+.+.+.+|++.|+.+.++.+++.+........ + ..++.+.++..-++.+++.+
T Consensus 287 ~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g 366 (468)
T TIGR00788 287 PSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQ 366 (468)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHH
Confidence 3333333334345555667788888899999999999998776522111100 0 01334466777889999999
Q ss_pred HHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 130 LLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 130 ~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
..+++...++.+.+|++++|...+++.+..++|..+|+.++..+
T Consensus 367 ~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l 410 (468)
T TIGR00788 367 LKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLL 410 (468)
T ss_pred HHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999876433
No 221
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.63 E-value=8e-05 Score=72.42 Aligned_cols=155 Identities=19% Similarity=0.200 Sum_probs=85.9
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhH
Q 012075 274 RGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGP 353 (471)
Q Consensus 274 ~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (471)
.++..-.+++++++.++..|.++|| .|||+.++.+.... .+....|+ . . .++. .
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~--yGRkpvll~c~~~v-a~s~ll~~--~------------------S--~~F~-a 123 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDR--YGRKPVLLACLIGV-ALSYLLWA--L------------------S--RNFA-A 123 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhh--hCchHHHHHHHHHH-HHHHHHHH--H------------------H--HHHH-H
Confidence 4566677899999999999999999 89999887665433 22222222 0 0 2332 2
Q ss_pred HHH-HHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccCchhhHHH----------HHHHH
Q 012075 354 FVL-YFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTHKVSLLSQL----------VVNWS 422 (471)
Q Consensus 354 ~~~-~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~~~p~~~~~----------~~~~~ 422 (471)
++. =++.|.+.+.. +++-++++|+.++ ++++.+++....--++|..++-.++. |..++ ..++.
T Consensus 124 fv~aR~l~Gi~kgnl-~v~rAiisdV~se-k~r~l~ms~v~~a~~lGfilGPmIGg----yla~f~~~~g~~p~alP~~~ 197 (451)
T KOG2615|consen 124 FVLARFLGGIFKGNL-SVIRAIISDVVSE-KYRPLGMSLVGTAFGLGFILGPMIGG----YLAQFSSISGSYPFALPCLL 197 (451)
T ss_pred HHHHHHhhhhccCch-HHHHHHHHhhcCh-hhccceeeeeehhhhcchhhcchhhh----HHHhhHhhhccCchHHHHHH
Confidence 222 34556665544 4567899999944 45577777554433444443333332 22221 11233
Q ss_pred HHHhhhhhhhheeeeeeccCCCccCccccccCcC-CCCCCC
Q 012075 423 LTTISYPLLVILVLLAVKDEKSPEESTNSKEVTL-PAADDG 462 (471)
Q Consensus 423 ~~~~~~~~~i~~~~~~~pet~~~~~~~~~~~~~~-~~~~~~ 462 (471)
.++... .-+.+..+++|||...+|.. ++|.+. |++||.
T Consensus 198 v~i~a~-~~v~~~~~~lpETL~~rk~~-~~~~~~~~~~~~~ 236 (451)
T KOG2615|consen 198 VFILAA-GDVTFFPWFLPETLPLRKRN-DEHSTLQEAADDR 236 (451)
T ss_pred HHHHHH-HHHHHHHHhCCccccchhhc-ccccchhhhhhhh
Confidence 322222 22344557889996665555 555533 334443
No 222
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.62 E-value=0.0038 Score=58.09 Aligned_cols=71 Identities=24% Similarity=0.473 Sum_probs=52.4
Q ss_pred hhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh-hhhhhccCCCCCchhh
Q 012075 74 FGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA-EGAIMTSYPPPNRKGT 150 (471)
Q Consensus 74 ~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~-~~~~i~~~~~~~~RG~ 150 (471)
...+.|.++|+-|||+..+.-++.|.+ +++. -.++.+-.++++|++.|++.+.+..+ ..=+++|. .++||.
T Consensus 88 FGtivgSLaDkqGRKracvtycitYiL---sCiT-KhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEH--nekr~F 159 (454)
T KOG4332|consen 88 FGTIVGSLADKQGRKRACVTYCITYIL---SCIT-KHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEH--NEKRGF 159 (454)
T ss_pred HHHHHHHHHhhhccccceeeehHHHHH---HHHh-hcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHh--hhccCC
Confidence 346788999999999998888877754 4443 23567778999999999999998665 45556664 344543
No 223
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.62 E-value=0.00027 Score=70.32 Aligned_cols=112 Identities=15% Similarity=0.099 Sum_probs=73.8
Q ss_pred ccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCC-
Q 012075 270 NLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGS- 348 (471)
Q Consensus 270 ~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 348 (471)
+..+.++......++..++.++.|++.|| +|||+...++...+.+ ...... . . +
T Consensus 35 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr--~g~r~~~~~~~~~~~i-~~~~~~--~--~------------------~~ 89 (366)
T TIGR00886 35 STAQLGNLVAVPVLAGAVLRIILGFLVDK--FGPRYTTTLSLLLLAI-PCLWAG--L--A------------------VQ 89 (366)
T ss_pred CHHHhhHhhHHHHHHHHHHHHHHHHHHHH--hCchHHHHHHHHHHHH-HHHHHH--H--H------------------hh
Confidence 44456677778899999999999999999 8999977766554422 111111 0 0 1
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 349 DFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 349 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
++....+..++.|++.+.+ +....++.+.++ +++++++.++.....++|..++..+.+
T Consensus 90 ~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~i~~ 147 (366)
T TIGR00886 90 SYSVLLLLRLFIGIAGGSF-ASCMPWISFFFP-KKIQGTALGLAAGWGNMGGGVAQFVMP 147 (366)
T ss_pred hHHHHHHHHHHHHHhchhh-HhHHHHHHHhcC-HhhhhHHHHHHHHHhHHHHHHHHHHHH
Confidence 2333455566677765554 345567788874 345688888888777788877766554
No 224
>PRK11462 putative transporter; Provisional
Probab=97.61 E-value=0.0011 Score=68.70 Aligned_cols=102 Identities=9% Similarity=0.028 Sum_probs=63.0
Q ss_pred HHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCC---
Q 012075 68 YTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPP--- 144 (471)
Q Consensus 68 ~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~--- 144 (471)
.....++.+++++++||+|+|+.+..+.....+....... ...++...+++.-++.|++.+...+...+.++|..+
T Consensus 273 ~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e 351 (460)
T PRK11462 273 CVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFF-VPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGE 351 (460)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhH
Confidence 3444566789999999999999877555433221111111 112233344555567788877766655666676655
Q ss_pred ----CCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 145 ----PNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 145 ----~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
.++.|...+.+.....+|..+|+.+.
T Consensus 352 ~~tG~r~~g~~~a~~~f~~Klg~alg~~i~ 381 (460)
T PRK11462 352 WCNGKRLTGISFAGTLFVLKLGLAFGGALI 381 (460)
T ss_pred HhcCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345556777777888888887765
No 225
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=97.60 E-value=0.0011 Score=68.06 Aligned_cols=118 Identities=15% Similarity=0.086 Sum_probs=73.8
Q ss_pred cccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCC
Q 012075 269 FNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGS 348 (471)
Q Consensus 269 ~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (471)
++..+.++......++..++.+..|++.|| +|.|+...++.+...+ ..+... +..+ +. . +
T Consensus 67 ls~~q~g~l~ai~~l~~al~rip~G~l~Dr--~G~R~v~~~~~ll~~i-~~~~~~--~a~~------------~~-~--~ 126 (462)
T PRK15034 67 FTTDQLFLLTALPSVSGALLRVPYSFMVPI--FGGRRWTVFSTAILII-PCVWLG--IAVQ------------NP-N--T 126 (462)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChHHHHHHHHHHHH-HHHHHH--HHHc------------cc-C--C
Confidence 344455666666677777888888999999 7888866655544321 111111 1100 11 1 3
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 349 DFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 349 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
++...+++.++.|+..+ ..+.....+++.++ +++++++.|++....++|..+...+.+
T Consensus 127 s~~~lli~r~l~Gigg~-~f~~~~~~vs~wfp-~~~rG~A~Gi~~g~G~~G~~l~~~l~p 184 (462)
T PRK15034 127 PFGIFIVIALLCGFAGA-NFASSMGNISFFFP-KAKQGSALGINGGLGNLGVSVMQLVAP 184 (462)
T ss_pred CHHHHHHHHHHHHHHHH-hHHHHHHHHHHHCC-HhHhHHHHHHHHHHHhhHHHHHHHHHH
Confidence 45567778888888744 44555567888884 455699999987777777776665543
No 226
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.52 E-value=0.00058 Score=71.38 Aligned_cols=98 Identities=11% Similarity=0.040 Sum_probs=72.8
Q ss_pred hhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhh-c-----ccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCC
Q 012075 73 IFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYN-H-----HKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPN 146 (471)
Q Consensus 73 i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~-~-----~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~ 146 (471)
+...+++++.+|++++..+.+|.++..+......... . .-|.+.++...++.|+|.....+....++.+.+|++
T Consensus 335 ~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~ 414 (500)
T PRK09584 335 ILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQR 414 (500)
T ss_pred HHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHH
Confidence 3345567778888777778887766554322211100 0 013567899999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHhhhhhhhHHH
Q 012075 147 RKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 147 ~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
.||+.+|.+.....+|+.++..+.
T Consensus 415 ~rg~~~g~~~l~~a~g~~~~g~~~ 438 (500)
T PRK09584 415 LMGFIMGSWFLTTAGAALIAGYVA 438 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888878887776665
No 227
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.46 E-value=0.0026 Score=63.75 Aligned_cols=62 Identities=11% Similarity=-0.055 Sum_probs=47.3
Q ss_pred cchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 112 KHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 112 ~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
++.+..++.-.+.|++....++....+.+|..|++.||+.+|+.+..-++|.+.+|.+...+
T Consensus 278 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~ 339 (368)
T TIGR00903 278 LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLF 339 (368)
T ss_pred cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHH
Confidence 33444444555666766666666778899999999999999999999999998888876333
No 228
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.45 E-value=0.0011 Score=69.03 Aligned_cols=100 Identities=14% Similarity=0.176 Sum_probs=73.9
Q ss_pred HhhhchhhhhhhccchhHH-------HHHHHHHHHHHHH-----HHHhhhc--ccchHHHHHHHHHHhhhhhHHHhhhhh
Q 012075 72 TIFGILGGGIYNILGPQVT-------LISACSTYVLYAG-----SFLYYNH--HKHQAFAIAAGAILGIGAGLLWAAEGA 137 (471)
Q Consensus 72 ~i~~~~~g~l~d~~Grk~~-------l~i~~~~~~~~~~-----~~~~~~~--~~~~~~li~~r~l~G~g~g~~~~~~~~ 137 (471)
.+.+++.+++.||+|||+. +.+|.++..+... ....... ..+.+.++..-++.|+|.+...+....
T Consensus 323 ii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~ 402 (489)
T PRK10207 323 VVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLA 402 (489)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 3455667899999998863 4455443222111 0111111 135677888999999999999999999
Q ss_pred hhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 138 IMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 138 ~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
++.+.+|++.+|.++|+++...++|..+|..++.
T Consensus 403 ~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~ 436 (489)
T PRK10207 403 MIAALVPQHLMGFILGMWFLTQAAAFLLGGYVAT 436 (489)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988863
No 229
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.44 E-value=0.00064 Score=70.36 Aligned_cols=117 Identities=14% Similarity=0.121 Sum_probs=72.2
Q ss_pred cccchhhhHHHHHHHHHHHHhhhhhhhcccCCC-CccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCC
Q 012075 269 FNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFP-TRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSG 347 (471)
Q Consensus 269 ~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~-gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (471)
++..+.+.....+.....++.+++|+++|| + |||+..++|.+.+. ++.... .. . + ..
T Consensus 42 ls~~~a~~i~~~~~~~~~l~~ligG~LaDR--ilGrrr~iliG~il~~-lg~lll----~~----~--------~-~~-- 99 (493)
T PRK15462 42 YDDNHAYELFSAYCSLVYVTPILGGFLADK--VLGNRMAVMLGALLMA-IGHVVL----GA----S--------E-IH-- 99 (493)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--ccCcHHHHHHHHHHHH-HHHHHH----HH----h--------h-cc--
Confidence 344445566667778888899999999999 6 99998777765542 222111 00 0 0 00
Q ss_pred CCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CchhhhHHHHHHHHHHHHHHHHHhhhccc
Q 012075 348 SDFAGPFVLYFCYGLLDAMFQSMVYWVIGALAD-DSETLSRYSGFYKGVQSAGAAVAWQVDTH 409 (471)
Q Consensus 348 ~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~s~g~~i~~~~~~~ 409 (471)
... ..+...+..++.+...+....+++|+++ +++++.++++++....++|..++..+...
T Consensus 100 ~~~--~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~ 160 (493)
T PRK15462 100 PSF--LYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY 160 (493)
T ss_pred hhH--HHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHH
Confidence 111 1222223334455555666778999993 33345788999999888888888776543
No 230
>PRK10133 L-fucose transporter; Provisional
Probab=97.43 E-value=0.0057 Score=62.82 Aligned_cols=110 Identities=12% Similarity=-0.019 Sum_probs=74.3
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhh
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~ 134 (471)
.++............+..+++++.+++.||+|||+.+..+.++-.+...... ..++.+ .+..=++.|++.+..++.
T Consensus 292 ~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~---~~~~~~-~~~~~~l~glg~~~i~P~ 367 (438)
T PRK10133 292 MTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISA---FAGGHV-GLIALTLCSAFMSIQYPT 367 (438)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH---HcCChH-HHHHHHHHHHHHHHHHHH
Confidence 3455556666777777889999999999999999998888765443222211 123332 245567899999999988
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
..+...+..+ ++.+.+.++..... +|..++|.+.
T Consensus 368 ~~s~a~~~~~-~~~~~as~l~~~~~-~g~~~~~~i~ 401 (438)
T PRK10133 368 IFSLGIKNLG-QDTKYGSSFIVMTI-IGGGIVTPVM 401 (438)
T ss_pred HHHHHHcccc-hhhccchhHHhHHh-ccchHHHHHH
Confidence 8877777644 45677777775433 5555555543
No 231
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.38 E-value=0.0054 Score=59.68 Aligned_cols=163 Identities=10% Similarity=0.013 Sum_probs=98.5
Q ss_pred cCCcccccccccccccccccc-hhHHHHHHHHHHhhhhhhhHhhhhcCCCCCCChhhhhHHHHHHHHHHHhhhchhhhhh
Q 012075 4 RGESAGKQQMVVGKSRFRYNS-PLVQVCLIGLVCFCCPGMFNALSGMGGGGQVDTTAANNANTALYTTFTIFGILGGGIY 82 (471)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~ 82 (471)
|...++.+...+++.+-|.++ .|...+..++-+++......=+..+-.+..-+.+..+..++.........++..+.+.
T Consensus 188 r~~~~~~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la 267 (395)
T COG2807 188 REQAASIATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLA 267 (395)
T ss_pred cccccccccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 333455555555544444444 5777888888776554433222222111112344455566677777788889999999
Q ss_pred hcc-chhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCC-CCCchhhHHHHHHHHHH
Q 012075 83 NIL-GPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYP-PPNRKGTYISIFWSIFN 160 (471)
Q Consensus 83 d~~-Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~-~~~~RG~~~g~~~~~~~ 160 (471)
+|. .+|+..+...+.+.+...++.+ .+....++- -++.|+|.|...+.+-..+.+-+ ++++-++..|+-|..-.
T Consensus 268 ~R~~n~r~~~~~~~~~~l~G~~G~~~---~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GY 343 (395)
T COG2807 268 RRSKNQRPLVVLALLLMLVGLVGLLL---APGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGY 343 (395)
T ss_pred HHhcccchHHHHHHHHHHHHHHHHHH---hhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhH
Confidence 964 4677777776666554444433 222222222 49999999998877776665544 57777888888776555
Q ss_pred hhhhhhhHHH
Q 012075 161 MGGVIGGLIP 170 (471)
Q Consensus 161 ~G~~iG~~i~ 170 (471)
+=..+||++.
T Consensus 344 llAa~GP~l~ 353 (395)
T COG2807 344 LLAAFGPWLF 353 (395)
T ss_pred HHHhhhhhhH
Confidence 5556677765
No 232
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.30 E-value=0.002 Score=66.99 Aligned_cols=60 Identities=15% Similarity=0.257 Sum_probs=56.1
Q ss_pred cchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 112 KHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 112 ~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
.|.+.+++..++.|+|.....+....++++.+|++.||+++|++.....+|..+|+.+..
T Consensus 379 ~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~ 438 (475)
T TIGR00924 379 TSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLAT 438 (475)
T ss_pred cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999988764
No 233
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.25 E-value=0.0022 Score=68.90 Aligned_cols=133 Identities=17% Similarity=0.093 Sum_probs=85.6
Q ss_pred chhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCC---------C---C--
Q 012075 272 RTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHD---------K---P-- 337 (471)
Q Consensus 272 ~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---------~---~-- 337 (471)
.+.++....+.++..++.++.+++.|| .|||+.+.+|.++++ ++.++++....+..+|..+ + .
T Consensus 68 ~~~G~i~s~~~i~~~~~~i~v~~~~~r--~~r~~~i~~g~ll~~-lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~ 144 (633)
T TIGR00805 68 SSSGLINGSYEIGNLLLIIFVSYFGTK--LHRPIVIGIGCAIMG-LGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFL 144 (633)
T ss_pred CcceeeeehhhHHHHHHHHHHHHhhcc--cCcceEEEecHHHHH-HHHHHHhChHHhcCCcccccccccccccccccccc
Confidence 356677777889999999999999999 789998888876663 3333332111111111100 0 0
Q ss_pred ------C---Cc----cCCCCC--CCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHH
Q 012075 338 ------P---AK----LDFKNS--GSDFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 402 (471)
Q Consensus 338 ------~---~~----~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i 402 (471)
+ +. ....+. ...+...++.-++.|++.+...+....+++|.++ +++++.+.+++.....+|.++
T Consensus 145 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~-~~~~~~~~~i~~~~~~iG~~l 223 (633)
T TIGR00805 145 CMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAK-SKNSPLYIGILESIAVFGPAF 223 (633)
T ss_pred ccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCC-ccccHHHHHHHHHHHHhhhHH
Confidence 0 00 000000 0123345567788899998888888889999984 345689999999999999999
Q ss_pred Hhhhcc
Q 012075 403 AWQVDT 408 (471)
Q Consensus 403 ~~~~~~ 408 (471)
++.+..
T Consensus 224 G~llgg 229 (633)
T TIGR00805 224 GYLLGS 229 (633)
T ss_pred HHHHHH
Confidence 988764
No 234
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.25 E-value=0.084 Score=54.35 Aligned_cols=147 Identities=10% Similarity=0.044 Sum_probs=81.8
Q ss_pred HHHHHHHHHhhhhhhhHhhhhcCCCCCC---Ch--hhhhHHHHHHHHHHHhh-hchhhhhhhccchhHHHHHHHHHHHHH
Q 012075 28 QVCLIGLVCFCCPGMFNALSGMGGGGQV---DT--TAANNANTALYTTFTIF-GILGGGIYNILGPQVTLISACSTYVLY 101 (471)
Q Consensus 28 ~~~~~~~~~f~~~~~~~~~~~l~~~~~~---~~--~~~~~~~~~~~~~~~i~-~~~~g~l~d~~Grk~~l~i~~~~~~~~ 101 (471)
.++.+++.+|+....|+.+-.+-..... +. +.....-.......++. .++-+++++|++|++.+-+....|..+
T Consensus 8 k~~~~~l~fF~il~~Y~iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~ 87 (472)
T TIGR00769 8 KFLPLFLMFFCILFNYTILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGF 87 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHH
Confidence 4566777777777677766544332111 11 11111111111222222 466789999999999988877666554
Q ss_pred HHHHHhh---hc--c-c----------------------chHHHHHHHHHHhhhhhHHHh-hhhhhhccCCCCCchhhHH
Q 012075 102 AGSFLYY---NH--H-K----------------------HQAFAIAAGAILGIGAGLLWA-AEGAIMTSYPPPNRKGTYI 152 (471)
Q Consensus 102 ~~~~~~~---~~--~-~----------------------~~~~li~~r~l~G~g~g~~~~-~~~~~i~~~~~~~~RG~~~ 152 (471)
.+.+... .. . + +.|..-+.-+..-+-...... .--.++.|+.+++|-.|..
T Consensus 88 f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy 167 (472)
T TIGR00769 88 FALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFY 167 (472)
T ss_pred HHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 4432221 10 0 0 122211112222222222211 2345678999999999999
Q ss_pred HHHHHHHHhhhhhhhHHHHHhh
Q 012075 153 SIFWSIFNMGGVIGGLIPFILN 174 (471)
Q Consensus 153 g~~~~~~~~G~~iG~~i~~~~~ 174 (471)
+++..+-++|.++|+.+...+.
T Consensus 168 ~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 168 ALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997764443
No 235
>PTZ00207 hypothetical protein; Provisional
Probab=97.24 E-value=0.0045 Score=65.41 Aligned_cols=94 Identities=15% Similarity=0.162 Sum_probs=61.6
Q ss_pred HhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHHH
Q 012075 288 GSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAMF 367 (471)
Q Consensus 288 g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 367 (471)
..++.|++.|| +|||+.+.++.+... ++.+... . . ++ +... ++++..++..++.|++.+..
T Consensus 77 ~~lp~G~L~Dr--~G~R~vllig~ll~~-iG~ll~a--l--a--~~--------~~i~--~s~~~l~l~r~l~G~G~~~~ 137 (591)
T PTZ00207 77 FLLPYSFIYDY--LGPRPIFVLSMTVFC-LGTLLFA--L--T--FQ--------EVIE--GSVVRLSVYNGLMTLGCMLF 137 (591)
T ss_pred HHHHHHHHHHH--hCcHHHHHHHHHHHH-HHHHHHH--H--H--hc--------cccc--CcHHHHHHHHHHHHHHHHHH
Confidence 44567999999 899998887766552 2222221 1 1 00 1111 23444555666778887777
Q ss_pred HHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHH
Q 012075 368 QSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 402 (471)
Q Consensus 368 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i 402 (471)
.+.....+.+.|+ ++++++.|+.+...++|.++
T Consensus 138 ~~~~~~~i~~~Fp--~~RG~a~Gi~~~~~gLGsaI 170 (591)
T PTZ00207 138 DLGAVVTVLSVFP--SNRGAVVAIMKTFTGLGSAI 170 (591)
T ss_pred HHHHHHHHHHhCh--hhhHHHHHHHHHHHHHHHHH
Confidence 7776767788884 45599999999999888875
No 236
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.22 E-value=0.0033 Score=65.51 Aligned_cols=112 Identities=13% Similarity=0.099 Sum_probs=87.5
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccch--hHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHh
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGP--QVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWA 133 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Gr--k~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~ 133 (471)
+.......++++-....++.++.|+++|+... +....++.++-.+ .. .....+++++.++...++.|+..|....
T Consensus 331 ~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl--~~-~~~p~~~~~~~l~~~~~~fG~~~g~~~~ 407 (509)
T KOG2504|consen 331 SSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL--AR-LFLPFATTYVGLIVFSILFGFCVGSFSS 407 (509)
T ss_pred ChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH--HH-HHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 34455566666666677788999999999993 3344444433322 22 2224568899999999999999999988
Q ss_pred hhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 134 AEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 134 ~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
..+.++.|+...++-..+.|+......++.++||.+.
T Consensus 408 l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPia 444 (509)
T KOG2504|consen 408 LTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIA 444 (509)
T ss_pred HHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccc
Confidence 8888999999999999999999999999999999987
No 237
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.17 E-value=0.0052 Score=63.63 Aligned_cols=153 Identities=16% Similarity=0.144 Sum_probs=89.9
Q ss_pred hhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHH
Q 012075 275 GLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPF 354 (471)
Q Consensus 275 ~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (471)
+.....+.++.+++-++++.+.|| +. +..+...+. +.|+....+.. +. .+++...
T Consensus 84 ~~~~t~F~v~Yii~~~p~~~L~~r--~~----ls~~l~~~~----~~w~~~~~~~~------------~~---~s~~~~i 138 (495)
T KOG2533|consen 84 GVLDTVFYVGYIIGQFPSGLLGDR--FP----LSKGLSVSG----ILWGLFGFLTA------------AV---HSFPGLI 138 (495)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHHh--CC----hHHHHHHHH----HHHHHHHHHHH------------HH---hhhHHHH
Confidence 344566788888999999999999 44 111222221 11111000110 10 2333457
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccCch---hhHHHHHHHH--HHHhhhh
Q 012075 355 VLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTHKVS---LLSQLVVNWS--LTTISYP 429 (471)
Q Consensus 355 ~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~~~p---~~~~~~~~~~--~~~~~~~ 429 (471)
+.-++.|++.++..|..-.+++..|.+ ++++.-+|++...+++|..++-++++.... .....+-.|. +-++..+
T Consensus 139 alr~llGl~es~~wP~~~~~lg~wy~~-~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~ 217 (495)
T KOG2533|consen 139 ALRFLLGLFESGGWPGVVAILGNWYGK-SERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITL 217 (495)
T ss_pred HHHHHHHHHhcccchHHHHHHHhhcCh-hhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHH
Confidence 778899999999999988899999943 456899999998888888888776643100 0000111222 2222223
Q ss_pred hhhheeeeeeccCCCccCcccccc
Q 012075 430 LLVILVLLAVKDEKSPEESTNSKE 453 (471)
Q Consensus 430 ~~i~~~~~~~pet~~~~~~~~~~~ 453 (471)
...+++++++|+-.++.+...++|
T Consensus 218 ~~gi~~f~~lp~~P~~~~fl~~~e 241 (495)
T KOG2533|consen 218 VLGIVVFFFLPDNPSKAWFLTDEE 241 (495)
T ss_pred HHHheEEEEecCChhhccccchHH
Confidence 344557788888766555555444
No 238
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.04 E-value=0.026 Score=56.12 Aligned_cols=96 Identities=17% Similarity=0.218 Sum_probs=72.5
Q ss_pred chhhhhh-hccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHH
Q 012075 76 ILGGGIY-NILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISI 154 (471)
Q Consensus 76 ~~~g~l~-d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~ 154 (471)
...+.+. .+.+.|+.-.+++..-.+........+..++.+.+..+-++.|+|.|...++.-+.+.+.+++++-|..+|.
T Consensus 262 ~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~ 341 (403)
T PF03209_consen 262 LLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGA 341 (403)
T ss_pred HHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHH
Confidence 3445444 477777777777765444333333334456889999999999999999999988889999999999999999
Q ss_pred HHHHHHhhhhhhhHHHH
Q 012075 155 FWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 155 ~~~~~~~G~~iG~~i~~ 171 (471)
+.....+..-+|..++.
T Consensus 342 WGaaQA~A~Glg~~~GG 358 (403)
T PF03209_consen 342 WGAAQAIARGLGTFLGG 358 (403)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99888877777766653
No 239
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.00 E-value=0.0016 Score=64.45 Aligned_cols=153 Identities=15% Similarity=0.080 Sum_probs=90.7
Q ss_pred ccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCC
Q 012075 268 QFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSG 347 (471)
Q Consensus 268 ~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (471)
+++..+.++......+...+..++.|++.|| +|-|+....+.+++.+- ++....+. ..
T Consensus 45 ~LS~~q~~ll~aiPil~GallRl~~g~l~dr--fGgR~~~~~s~~l~~IP---~~~~~~a~---------------~~-- 102 (417)
T COG2223 45 GLSEGQKGLLVAIPILVGALLRLPYGFLTDR--FGGRKWTILSMLLLLIP---CLGLAFAV---------------TY-- 102 (417)
T ss_pred CCCHHHHHHHHHHHHHHhHHHHHHHHhhhcc--cCchHHHHHHHHHHHHH---HHHHHHHc---------------cC--
Confidence 3455567777777778888889999999999 66666554444433211 11111111 11
Q ss_pred CCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccCchhhH--HHHHHHHHHH
Q 012075 348 SDFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTHKVSLLS--QLVVNWSLTT 425 (471)
Q Consensus 348 ~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~~~p~~~--~~~~~~~~~~ 425 (471)
++++..+++.++.|+..+.+-.-+ ..+++.|+ +++++.+.|++- ..++|.++.-++.|....... .......++.
T Consensus 103 ~~~~~ll~~gll~G~~GasFav~m-~~~s~~fP-~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~ 179 (417)
T COG2223 103 PSTWQLLVIGLLLGLAGASFAVGM-PNASFFFP-KEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYV 179 (417)
T ss_pred CchHHHHHHHHHHhcccceehccc-ccccccCC-hhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 334556777788888777665433 35777774 567799999888 889999999888774311111 0111222333
Q ss_pred hhhhhhhheeeeeeccCCCc
Q 012075 426 ISYPLLVILVLLAVKDEKSP 445 (471)
Q Consensus 426 ~~~~~~i~~~~~~~pet~~~ 445 (471)
..++......++.+.|..|+
T Consensus 180 ~~l~v~~v~~~~~~~d~p~~ 199 (417)
T COG2223 180 VALAIAAVLAWLGMNDVPEH 199 (417)
T ss_pred HHHHHHHHHHHHHhCCChhh
Confidence 33333334455665555554
No 240
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.81 E-value=0.015 Score=54.63 Aligned_cols=117 Identities=14% Similarity=0.020 Sum_probs=66.4
Q ss_pred ccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCC
Q 012075 270 NLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSD 349 (471)
Q Consensus 270 ~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (471)
+.++.........+|.-+| ++.|.+.|+ .|.+..+++|.+.. .++....- .. +.+ .... +.
T Consensus 35 sq~~l~~l~~~~~~G~~~G-~~~G~l~d~--~gp~~~l~iG~~~~-~~GY~~~~-l~-----~~~-------~i~~--~~ 95 (250)
T PF06813_consen 35 SQSQLNTLSTAGDIGSYFG-ILAGLLYDR--FGPWVVLLIGAVLG-FVGYGLLW-LA-----VSG-------RIPS--LP 95 (250)
T ss_pred CHHHHHHHHHHHHHHhhcc-HHHHHHHHh--cchHHHHHHHHHHH-HHHHHHHH-HH-----HhC-------ccCc--cc
Confidence 3333344455667777775 678999999 78887777776544 23322211 11 111 1111 34
Q ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 012075 350 FAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVD 407 (471)
Q Consensus 350 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~ 407 (471)
++..++..++.+.+.+..++......-+-| |++|+++.|+.+.+..+++++--.+.
T Consensus 96 ~~~~~~~~~l~~~s~~~~~ta~lvt~~~NF--P~~RG~vvgilk~~~GLSaai~t~i~ 151 (250)
T PF06813_consen 96 VWLMCLFLFLGGNSSCWFNTASLVTCVRNF--PRSRGTVVGILKGFFGLSAAIFTQIY 151 (250)
T ss_pred hHHHHHHHHHHcccHHHhhhHHHHHHHHhC--ccccCceehhhhHHHHhHHHHHHHHH
Confidence 444444434444444444454433344556 34568999999999988888765543
No 241
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.77 E-value=7.3e-05 Score=76.91 Aligned_cols=111 Identities=14% Similarity=0.166 Sum_probs=73.6
Q ss_pred hhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHH
Q 012075 275 GLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPF 354 (471)
Q Consensus 275 ~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (471)
++......++.++|+++.|.+.|| +|||+....+...+. ++.+..+ +.+ + . .++....
T Consensus 49 ~~~~~~~~~g~~~G~~~~g~~~d~--~GRk~~~~~~~~~~~-i~~~~~~--------~~~-------~-~---~~~~~~~ 106 (451)
T PF00083_consen 49 SLLTSSFFIGAIVGALIFGFLADR--YGRKPALIISALLMI-IGSILIA--------FAP-------S-Y---NNFWMLL 106 (451)
T ss_pred HHHHHHHHhhhccccccccccccc--ccccccccccccccc-ccccccc--------ccc-------c-c---ccccccc
Confidence 455667889999999999999999 899998877765542 1111110 110 0 0 0233345
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 355 VLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 355 ~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
+.-++.|++.+...+....++.|..++ +++++..+..+....+|..++..++.
T Consensus 107 ~~R~~~G~~~g~~~~~~~~~~~E~~~~-~~R~~~~~~~~~~~~~G~~~~~~~~~ 159 (451)
T PF00083_consen 107 IGRFLIGFGIGGAYVVSPIYISEIAPP-KHRGFLSSLFQLFWALGILLASLIGY 159 (451)
T ss_pred ccccccccccccccccccccccccccc-cccccccccccccccccccccccccc
Confidence 556678888888888888889999843 34467777777766667666666543
No 242
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=96.76 E-value=0.0062 Score=63.93 Aligned_cols=109 Identities=18% Similarity=0.173 Sum_probs=80.2
Q ss_pred hhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHH
Q 012075 275 GLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPF 354 (471)
Q Consensus 275 ~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (471)
++......++..++.++.|+++|+ +|||+.++.+.+.. .++.++.+ .. .++....
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~--~GRk~~l~~~~~~~-~iG~ii~~----~a------------------~~~~~l~ 146 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDR--IGRKKTLLLAVVLF-LIGAIIIA----LA------------------PSWYQLI 146 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHH-HHHHHHHH----Hh------------------hhHHHHH
Confidence 577778899999999999999999 89999777665443 22222211 00 2233467
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhccc
Q 012075 355 VLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTH 409 (471)
Q Consensus 355 ~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~ 409 (471)
+.=++.|++.+........+++|+.+ ++.|+...+.++....+|..+++..+..
T Consensus 147 ~GR~l~G~g~G~~~~~~piy~sEiap-~~~RG~l~~~~~l~~~~Gi~~~~~~~~~ 200 (513)
T KOG0254|consen 147 VGRILTGLGVGGASVLAPVYISEIAP-AHIRGTLVSLYQLFITIGILLGYCINYG 200 (513)
T ss_pred HHHHHhccchhhhhhcchhhHhhcCC-hhhhHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 77788899888888888888999984 3345788888888888999999877653
No 243
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=96.76 E-value=0.027 Score=57.56 Aligned_cols=115 Identities=9% Similarity=-0.041 Sum_probs=78.9
Q ss_pred ccccch-hhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCC
Q 012075 268 QFNLRT-RGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNS 346 (471)
Q Consensus 268 ~~~~~~-~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (471)
+++..+ .+...-.+..+..+..++.|.+.|| +|-|+.+..+.+...++ .++. .+.
T Consensus 57 glT~~qv~G~I~s~F~ysYal~qIp~GlLaDr--lG~K~vL~l~~l~Wsl~-t~L~-------------------~fa-- 112 (511)
T TIGR00806 57 NFTEETVTNEIIPVLPYSHLAVLVPVFLLTDY--LRYKPVLVLQALSFVCV-WLLL-------------------LLG-- 112 (511)
T ss_pred CCCHHHhcchHHHHHHHHHHHHHHHHHHHHHH--hCchHHHHHHHHHHHHH-HHHH-------------------HHH--
Confidence 344444 5666666778888888889999999 77777554443322111 1111 111
Q ss_pred CCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhccc
Q 012075 347 GSDFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTH 409 (471)
Q Consensus 347 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~ 409 (471)
.+.....++=+++|++.+... ..+.++...++ +++++++.+..+.-..+|.+++..+...
T Consensus 113 -~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP-~kER~ratsi~~sg~~vG~~Ia~~L~ql 172 (511)
T TIGR00806 113 -TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVP-PSRYQRAAAYSRAAVLLGVFLSSVLGQL 172 (511)
T ss_pred -HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123346777788999988888 77778888884 5677999999999999999998876643
No 244
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.72 E-value=0.019 Score=60.62 Aligned_cols=103 Identities=20% Similarity=0.181 Sum_probs=79.5
Q ss_pred HHHHhhhchhhhhhhccch-hHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCc
Q 012075 69 TTFTIFGILGGGIYNILGP-QVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNR 147 (471)
Q Consensus 69 ~~~~i~~~~~g~l~d~~Gr-k~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~ 147 (471)
.+..+++++.+.+..+++| |+.++++++.+.++.++... ...+|....++.-++.|+|.|...........-..|+++
T Consensus 360 fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~-~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ 438 (599)
T PF06609_consen 360 FGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAA-VRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDED 438 (599)
T ss_pred HHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHH-ccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchH
Confidence 3345667788888888886 77778888877766555433 234566667788999999999987666666666778999
Q ss_pred hhhHHHHHHHHHHhhhhhhhHHHHH
Q 012075 148 KGTYISIFWSIFNMGGVIGGLIPFI 172 (471)
Q Consensus 148 RG~~~g~~~~~~~~G~~iG~~i~~~ 172 (471)
.|.++|+..+...+|..+|..+-..
T Consensus 439 ig~a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 439 IGTATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 9999999999999999999887543
No 245
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.67 E-value=0.062 Score=56.48 Aligned_cols=98 Identities=10% Similarity=0.012 Sum_probs=74.7
Q ss_pred hhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccch-HHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHH
Q 012075 74 FGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQ-AFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYI 152 (471)
Q Consensus 74 ~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~-~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~ 152 (471)
.....+...|++|||+.+..+.....+......... .... +...+...+..++.+..+.....+.+|+.|...|+.+.
T Consensus 366 ~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~ 444 (521)
T KOG0255|consen 366 AYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLP-DDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAV 444 (521)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhh-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 335568999999999999999987655433333211 1122 35666777777777777777789999999999999999
Q ss_pred HHHHHHHHhhhhhhhHHHHH
Q 012075 153 SIFWSIFNMGGVIGGLIPFI 172 (471)
Q Consensus 153 g~~~~~~~~G~~iG~~i~~~ 172 (471)
+.......+|.+++|.+.+.
T Consensus 445 ~~~~~~~~~~~i~ap~~~~~ 464 (521)
T KOG0255|consen 445 GAISAAARLGSILAPLFPLL 464 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998743
No 246
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=96.62 E-value=0.0099 Score=59.63 Aligned_cols=95 Identities=8% Similarity=-0.060 Sum_probs=64.4
Q ss_pred hhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcc--cchHHHHHHHHHHhhhhhH-HHhhhhhhhccCCCCCchhh
Q 012075 74 FGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHH--KHQAFAIAAGAILGIGAGL-LWAAEGAIMTSYPPPNRKGT 150 (471)
Q Consensus 74 ~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~--~~~~~li~~r~l~G~g~g~-~~~~~~~~i~~~~~~~~RG~ 150 (471)
|-++...++|++|||++.+.|.++++++...... ... .+..-+++.-.+..+..-+ .......+.+|++|.+-||.
T Consensus 364 Gyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~-~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t 442 (538)
T KOG0252|consen 364 GYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAG-PYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRST 442 (538)
T ss_pred ceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcC-CcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhh
Confidence 4588999999999999999999988775443222 111 1122223333333333322 33455677899999999999
Q ss_pred HHHHHHHHHHhhhhhhhHH
Q 012075 151 YISIFWSIFNMGGVIGGLI 169 (471)
Q Consensus 151 ~~g~~~~~~~~G~~iG~~i 169 (471)
.-|+..+.--+|.++|...
T Consensus 443 ~hGIsAA~GK~GAivg~~~ 461 (538)
T KOG0252|consen 443 CHGISAASGKAGAIVGAFG 461 (538)
T ss_pred hhhHHHHhccchHHHHHHH
Confidence 9999988888888887653
No 247
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.57 E-value=0.48 Score=47.63 Aligned_cols=88 Identities=9% Similarity=0.053 Sum_probs=52.5
Q ss_pred hchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHH
Q 012075 75 GILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISI 154 (471)
Q Consensus 75 ~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~ 154 (471)
.++++++.+|...+.-..+..++.. .+.+..+.++|.+.-+++-++.+++.|..-..--.+.+ ..++ ...+-
T Consensus 76 Kl~aP~fi~~v~y~~Ri~~~~~l~~---~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~----~~l~~ 147 (402)
T PF02487_consen 76 KLIAPFFIHRVPYWIRILICVALSA---AGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGK----SSLSA 147 (402)
T ss_pred HHHhHhhhhhccchHHHHHHHHHHH---HHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCc----ccccc
Confidence 3668888888764333333333332 33444455788888888888999888885544444433 2232 24566
Q ss_pred HHHHHHhhhhhhhHHH
Q 012075 155 FWSIFNMGGVIGGLIP 170 (471)
Q Consensus 155 ~~~~~~~G~~iG~~i~ 170 (471)
+.++...+.++|+..-
T Consensus 148 wssGTG~aGl~Ga~~y 163 (402)
T PF02487_consen 148 WSSGTGGAGLVGALYY 163 (402)
T ss_pred ccCCcChhhHHHHHHH
Confidence 6555666667776654
No 248
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.39 E-value=0.025 Score=57.84 Aligned_cols=154 Identities=13% Similarity=0.091 Sum_probs=83.6
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhH
Q 012075 274 RGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGP 353 (471)
Q Consensus 274 ~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (471)
-|++.....++..++++++|.+..|.+-.||| +..|..++ +++.+++. .+. +.+ . ...+..
T Consensus 73 fG~viaa~slg~~i~~liF~~Ws~k~~~~k~P-li~s~ii~-~~g~llY~---~l~--~~~---------~---~~~y~m 133 (488)
T KOG2325|consen 73 FGLVIAASSLGHAIFSLIFGIWSNKTGSVKKP-LIVSFLIA-IIGNLLYL---ALA--YVP---------N---GVKYLM 133 (488)
T ss_pred hhHHHHHHHHHHHhcchhhcccccccCCcccC-HHHHHHHH-HHHHHHHH---HHH--hcc---------c---chHHHH
Confidence 35666678999999999999999884333555 44555544 44445542 111 110 1 122356
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccC----------ch-h-hHHHHH-H
Q 012075 354 FVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTHK----------VS-L-LSQLVV-N 420 (471)
Q Consensus 354 ~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~~----------~p-~-~~~~~~-~ 420 (471)
+++.++.|++.+.... .-.+++.... .+++.++++...+-+.+|..++...++.. .| . .+++.. .
T Consensus 134 L~~R~l~Gvg~~n~a~-lR~Y~a~~s~-~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~ 211 (488)
T KOG2325|consen 134 LVARILTGVGVGNFAV-LRAYIADAST-VEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPA 211 (488)
T ss_pred HHHHHHcCcCcccHHH-HHHHHHhccC-ccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHH
Confidence 7788888888665543 4456655441 22335677666665556666665544321 11 1 122222 3
Q ss_pred HHHHHhhhhhhhheeeeeeccCCCccCcc
Q 012075 421 WSLTTISYPLLVILVLLAVKDEKSPEEST 449 (471)
Q Consensus 421 ~~~~~~~~~~~i~~~~~~~pet~~~~~~~ 449 (471)
|...++. +..+++++++++|-+.++++-
T Consensus 212 w~m~i~~-i~~~v~i~~~f~E~~~~~~~~ 239 (488)
T KOG2325|consen 212 WLMAILW-IIYIVIILFFFKEVYRGIIDK 239 (488)
T ss_pred HHHHHHH-HHHHHHHHhheeecccCcccc
Confidence 3333333 344455667777875554443
No 249
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.31 E-value=0.065 Score=52.45 Aligned_cols=39 Identities=15% Similarity=0.088 Sum_probs=24.7
Q ss_pred ccccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccce
Q 012075 266 GLQFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKR 306 (471)
Q Consensus 266 ~~~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~ 306 (471)
.++++.++.+..++.-.....+...+.|.+.|| .|||+.
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~--~Grk~~ 101 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADR--YGRKKA 101 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCchHH
Confidence 345665566655544344444445567889999 899983
No 250
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.13 E-value=0.069 Score=57.49 Aligned_cols=103 Identities=17% Similarity=0.229 Sum_probs=71.5
Q ss_pred HHHHHhhhchhhhhhhc-cchhHHHHHHHHHHHHHHHHHHhhhccc-----chHHHHHHHHHHhhhhhHHHhhhhhhhcc
Q 012075 68 YTTFTIFGILGGGIYNI-LGPQVTLISACSTYVLYAGSFLYYNHHK-----HQAFAIAAGAILGIGAGLLWAAEGAIMTS 141 (471)
Q Consensus 68 ~~~~~i~~~~~g~l~d~-~Grk~~l~i~~~~~~~~~~~~~~~~~~~-----~~~~li~~r~l~G~g~g~~~~~~~~~i~~ 141 (471)
....-+.++++|.++|+ +||++++.++.+++.+........+..+ +....+++=.+..+|.|..-+..++...|
T Consensus 33 ~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gd 112 (654)
T TIGR00926 33 TYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGD 112 (654)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHh
Confidence 33345667889999996 9999999999998776432222111101 12235667777888888887777777777
Q ss_pred CCCCC---chhhHHHHHHHHHHhhhhhhhHHH
Q 012075 142 YPPPN---RKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 142 ~~~~~---~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
-.+++ +|-+.+.++....++|+++++.+.
T Consensus 113 qf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~ 144 (654)
T TIGR00926 113 QFEERQLSLRSRFFSFFYFAINAGSLISTIIT 144 (654)
T ss_pred hcCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66544 466778888888889988887765
No 251
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.11 E-value=1.7 Score=45.18 Aligned_cols=152 Identities=14% Similarity=0.108 Sum_probs=80.1
Q ss_pred cchhHHHHHHHHHHhhhhhhhHhhhhcCCCCC---CChhhhhHHHHHHHHHH-HhhhchhhhhhhccchhHHHHHHHHHH
Q 012075 23 NSPLVQVCLIGLVCFCCPGMFNALSGMGGGGQ---VDTTAANNANTALYTTF-TIFGILGGGIYNILGPQVTLISACSTY 98 (471)
Q Consensus 23 ~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~-~i~~~~~g~l~d~~Grk~~l~i~~~~~ 98 (471)
+.-+...+.+++.+|+....|+.+.++..... ..++.....-....+-. .+.-.+-..++|+++|.+.+-+....|
T Consensus 20 ~~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F 99 (491)
T PF03219_consen 20 RSELKKFLPLALMFFFILFNYTILRDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPF 99 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 34445577777777777666777665544311 12222211111111111 222356788999999999888776655
Q ss_pred HHHHHHH---Hhhh---cccchH-H---HHHHHHHHhh------------------hhhHHHh-hhhhhhccCCCCCchh
Q 012075 99 VLYAGSF---LYYN---HHKHQA-F---AIAAGAILGI------------------GAGLLWA-AEGAIMTSYPPPNRKG 149 (471)
Q Consensus 99 ~~~~~~~---~~~~---~~~~~~-~---li~~r~l~G~------------------g~g~~~~-~~~~~i~~~~~~~~RG 149 (471)
..+-+.+ +++. ..++.. . ....+.+.|+ -.+.... .--.+..|+.+.+|-.
T Consensus 100 ~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAK 179 (491)
T PF03219_consen 100 LGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAK 179 (491)
T ss_pred HHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 4443332 2211 111111 0 0001111111 1111000 1133456788899999
Q ss_pred hHHHHHHHHHHhhhhhhhHHHHHhh
Q 012075 150 TYISIFWSIFNMGGVIGGLIPFILN 174 (471)
Q Consensus 150 ~~~g~~~~~~~~G~~iG~~i~~~~~ 174 (471)
|..+++..+-++|.++++.+...+.
T Consensus 180 RfYpl~g~ganigli~sG~~~~~~~ 204 (491)
T PF03219_consen 180 RFYPLFGLGANIGLIFSGQLTSYFS 204 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998887754443
No 252
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=95.87 E-value=0.078 Score=52.57 Aligned_cols=112 Identities=12% Similarity=0.180 Sum_probs=78.1
Q ss_pred hhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchh
Q 012075 273 TRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAG 352 (471)
Q Consensus 273 ~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (471)
+.++...++..+..++++..+++.|| +|+|.-...|..++ .+++.++ +|.. + . ..|..
T Consensus 49 ~a~liqfaff~gYf~~~lpa~~~~kk--~gyk~gi~lgL~l~-avg~~lF---------~pAa------~--~--~~y~~ 106 (422)
T COG0738 49 EASLIQFAFFGGYFIMSLPAGLLIKK--LGYKAGIVLGLLLY-AVGAALF---------WPAA------S--S--KSYGF 106 (422)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHH--hhhHHHHHHHHHHH-HHHHHHH---------hhhh------h--h--hhHHH
Confidence 56788888899999999999999999 89998777776655 2222222 1110 1 1 23433
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 012075 353 PFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVD 407 (471)
Q Consensus 353 ~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~ 407 (471)
.+...+..+.+-+..++....+++.+.++ ++.++-+.+.+.+.++|+.++-.+.
T Consensus 107 FL~~lFila~Gi~~LetaaNp~v~~lg~~-~~a~~rlnl~q~fn~lGa~~gp~~g 160 (422)
T COG0738 107 FLVALFILASGIGLLETAANPYVTLLGKP-ESAAFRLNLAQAFNGLGAILGPLLG 160 (422)
T ss_pred HHHHHHHHHhhhHHHHhccchHHHHhCCc-hhHHHHHHHHHHhhhhHHHHHHHHH
Confidence 34444566777888888888888888843 2446677888999999999987755
No 253
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.85 E-value=0.17 Score=50.91 Aligned_cols=96 Identities=19% Similarity=0.154 Sum_probs=57.3
Q ss_pred hhhchhhhhhh----ccchhHHHHHHHHHHHHHHHHHHhhhcccch-----------------HHHHHHHHHHhhhhhHH
Q 012075 73 IFGILGGGIYN----ILGPQVTLISACSTYVLYAGSFLYYNHHKHQ-----------------AFAIAAGAILGIGAGLL 131 (471)
Q Consensus 73 i~~~~~g~l~d----~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~-----------------~~li~~r~l~G~g~g~~ 131 (471)
+.+++.|..+| |+|||+.++......+..... +. ..+++. ...+++=-+.=++.-.+
T Consensus 82 ~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~-Li-g~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~ 159 (498)
T KOG0637|consen 82 LVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLF-LI-GYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTL 159 (498)
T ss_pred eecccccccccccccccccccchHHHhhHHHHHHHh-hh-hhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhh
Confidence 34467888888 589988877765432221111 11 111111 12233333333444444
Q ss_pred HhhhhhhhccCCCCCchhh-HHHHHHHHHHhhhhhhhHHH
Q 012075 132 WAAEGAIMTSYPPPNRKGT-YISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 132 ~~~~~~~i~~~~~~~~RG~-~~g~~~~~~~~G~~iG~~i~ 170 (471)
....=++++|.+.++++-+ +.+++..+..+|..+|...+
T Consensus 160 qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g 199 (498)
T KOG0637|consen 160 QGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALG 199 (498)
T ss_pred hhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecc
Confidence 4556677888876555555 99999999999999999887
No 254
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.69 E-value=0.013 Score=59.48 Aligned_cols=123 Identities=15% Similarity=0.154 Sum_probs=74.9
Q ss_pred HHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHHHhhHHH
Q 012075 287 LGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCYGLLDAM 366 (471)
Q Consensus 287 ~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 366 (471)
+.++++|++.||. +|+|+....|.+++ .++..+.+ .+ . . .+....++...+.+++++.
T Consensus 76 ~t~i~GG~laDr~-LG~~~tI~lGail~-~iGh~~L~--------~~--------~--~--~~~~gl~i~L~~I~iG~Gl 133 (498)
T COG3104 76 LTPIIGGWLADRV-LGTRRTIVLGAILM-AIGHLVLA--------IS--------S--V--SGPGGLYIGLALIIVGTGL 133 (498)
T ss_pred HHHHHHHHHHHHh-cchhHHHHHHHHHH-HHHHHHHh--------cc--------c--c--ccccHHHHHHHHHHhcccc
Confidence 4456788999996 79999888887766 33433321 11 0 0 1112245556666788888
Q ss_pred HHHHHHHHHHHhc--CCchhhhHHHHHHHHHHHHHHHHHhhhcccCchhhHHHHHHHHHHHhhhhhhhh
Q 012075 367 FQSMVYWVIGALA--DDSETLSRYSGFYKGVQSAGAAVAWQVDTHKVSLLSQLVVNWSLTTISYPLLVI 433 (471)
Q Consensus 367 ~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~i~ 433 (471)
.-+-+..+++|++ +|+| +-.+++++..-.++|+.++-...+.... .......+++..+.+...++
T Consensus 134 ~K~NiS~llg~ly~~~Dpr-rD~gFt~fY~~iNiGsl~~p~i~~~~~~-~~g~~~gF~~aavGm~~gl~ 200 (498)
T COG3104 134 FKPNISSLLGELYPKDDPR-RDGGFTLFYMGINIGSLIAPIITGLLAI-NYGWHVGFGLAAVGMIIGLV 200 (498)
T ss_pred ccccHHHHHHHhcCCCCcc-cCCCccEEEEEeehHHHHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHH
Confidence 8888888999998 4555 5677887777778887777665443200 00123444555554444444
No 255
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=95.45 E-value=3.1 Score=41.33 Aligned_cols=93 Identities=14% Similarity=0.059 Sum_probs=51.4
Q ss_pred chhhhhhh-----ccchhHHHHHHHHHHHHHHHHHHh---hh-------cccchHHHHHHHHHHhhhhhHHHhhhhhhhc
Q 012075 76 ILGGGIYN-----ILGPQVTLISACSTYVLYAGSFLY---YN-------HHKHQAFAIAAGAILGIGAGLLWAAEGAIMT 140 (471)
Q Consensus 76 ~~~g~l~d-----~~Grk~~l~i~~~~~~~~~~~~~~---~~-------~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~ 140 (471)
++|.|+.| |+|||++-++=+- |.+.....+. .. ..++...+...=++.=+.++..=.+.-...-
T Consensus 81 llWaPiVDs~y~k~~GrrksWvvp~q-~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwAL 159 (510)
T KOG3574|consen 81 LLWAPIVDSVYSKRFGRRKSWVVPCQ-YLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWAL 159 (510)
T ss_pred HHHHhhhHHHHHHhhccccceeeehH-HHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 68999999 9999998655432 1111111110 00 1122222222223444555554444555555
Q ss_pred cCCCCCchhhHHHHHHHHHHhhhhhhhHH
Q 012075 141 SYPPPNRKGTYISIFWSIFNMGGVIGGLI 169 (471)
Q Consensus 141 ~~~~~~~RG~~~g~~~~~~~~G~~iG~~i 169 (471)
.+-.+++-|.+........+.|..+|+.+
T Consensus 160 tmLs~e~lgyaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 160 TMLSRENLGYASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred HhcCHhhcCchhHHHHHHHhhhHHhhcce
Confidence 56678898888877766666666666655
No 256
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.20 E-value=4.4 Score=41.71 Aligned_cols=70 Identities=7% Similarity=-0.031 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHhHhHhhhc-ccc---ccccccccchhhhHHHHHHHHHHHHhhhhhhhc
Q 012075 227 VSTEITQVLKLFSNWKMLLIFPASWASNFFYSYQ-FNN---VNGLQFNLRTRGLNNVFYWGAQMLGSVGIGYIF 296 (471)
Q Consensus 227 ~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~s~~-~~~---~~~~~~~~~~~~l~~~~~~i~~i~g~~~~g~l~ 296 (471)
.++..+.+++.++-|.+..++.+.+.+-+-+.-. -.+ ....+++.+.-++..++.-=.+++.+++.+++.
T Consensus 264 i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlEkG~~KE~LAl~~li~~P~qii~~~~~~Kws 337 (544)
T PF13000_consen 264 IKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLEKGLSKEDLALLVLIDFPFQIILPYYIGKWS 337 (544)
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHHcCCCHHHhHHHHHHhhhHHHHHHHHhhhhh
Confidence 3445566677777776665555544443311100 001 122344333334444444444555555566654
No 257
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=95.16 E-value=0.013 Score=60.50 Aligned_cols=116 Identities=19% Similarity=0.214 Sum_probs=76.2
Q ss_pred ccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCC
Q 012075 270 NLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSD 349 (471)
Q Consensus 270 ~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (471)
+.+++++..-....|.+++.+..|++.|| +|-|++...+.++..++. +. +.+. .+ .+
T Consensus 71 s~~~k~~i~ss~~~G~i~~~iP~g~l~~k--~G~r~v~~~~~~~sa~~t-~l----~P~a-----------a~-----~~ 127 (466)
T KOG2532|consen 71 SSTEKGLIFSSFFWGYILGQIPGGYLADK--FGARRVFFISGLISALLT-LL----TPLA-----------AS-----IG 127 (466)
T ss_pred CHHHHHHHHHHHHHHHHHHHcCcHHHHHH--cCchHHHHHHHHHHHHHH-HH----HHHH-----------HH-----hc
Confidence 44467788888899999999999999999 677765554433321111 11 1000 01 12
Q ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhccc
Q 012075 350 FAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTH 409 (471)
Q Consensus 350 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~ 409 (471)
+...+++=++.|+..+...|.+..+...-.+ +.|+++..++......+|..++..++..
T Consensus 128 ~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P-~~Ers~~~ail~~g~q~g~v~~mp~sg~ 186 (466)
T KOG2532|consen 128 FYLLLVLRFLQGLGQGVLFPAIGSILAKWAP-PNERSTFIAILTAGSQLGTIITMPVSGL 186 (466)
T ss_pred chhhHHHHHHhHHHHhHHHhhhhceeeeECC-HHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 2245677778898888888877777777664 4456888887777766777777766543
No 258
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.12 E-value=0.074 Score=53.48 Aligned_cols=121 Identities=10% Similarity=0.013 Sum_probs=64.1
Q ss_pred HHHHHHHhhhhhhhcccC--CCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCch--hHHHHH
Q 012075 282 WGAQMLGSVGIGYIFDFS--FPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFA--GPFVLY 357 (471)
Q Consensus 282 ~i~~i~g~~~~g~l~D~~--~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 357 (471)
-+..++..++.|..+||. |+|||+..+.....+..+.+...+.+--......++ + .... ...+ ...+.+
T Consensus 77 Pi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~--~---~~~~--~~rai~~~~lg~ 149 (498)
T KOG0637|consen 77 PLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDN--E---RKPV--KPRAIVLFILGF 149 (498)
T ss_pred ccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCC--c---cccc--chHHHHHHHHHh
Confidence 344555566778899995 789988776543333233322221110000001111 0 0000 1111 112222
Q ss_pred HHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhccc
Q 012075 358 FCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTH 409 (471)
Q Consensus 358 ~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~~ 409 (471)
-+.=+..-..++.+-+++.++..+..+.-++.+.+-++.++|..++|...+.
T Consensus 150 ~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 150 WLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSY 201 (498)
T ss_pred HHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccc
Confidence 2333334455667888899988333332338889999999999999998753
No 259
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=94.87 E-value=0.35 Score=49.58 Aligned_cols=62 Identities=15% Similarity=0.278 Sum_probs=53.7
Q ss_pred cchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHh
Q 012075 112 KHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFIL 173 (471)
Q Consensus 112 ~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~~ 173 (471)
++.+..++.-++.|+..|-..+....+..+..++++|..+-.+...+..+|..+|..+++.+
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677788899999999999888888888888999999998888888999999999887644
No 260
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=93.79 E-value=0.28 Score=49.06 Aligned_cols=82 Identities=12% Similarity=0.160 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccc------hHHHHHHHHHHhhhhhHHHhhhhhhhccCCCC---CchhhHHHHHHHHH
Q 012075 89 VTLISACSTYVLYAGSFLYYNHHKH------QAFAIAAGAILGIGAGLLWAAEGAIMTSYPPP---NRKGTYISIFWSIF 159 (471)
Q Consensus 89 ~~l~i~~~~~~~~~~~~~~~~~~~~------~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~---~~RG~~~g~~~~~~ 159 (471)
+++++|.++|++........+...+ .+.++++-++.++|.|..=+......+|-.++ ++|.+.+.+|....
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 4677777777764433222221222 35789999999999999888777777777654 46778889999999
Q ss_pred HhhhhhhhHHH
Q 012075 160 NMGGVIGGLIP 170 (471)
Q Consensus 160 ~~G~~iG~~i~ 170 (471)
++|..++..+.
T Consensus 82 n~G~~~~~~~~ 92 (372)
T PF00854_consen 82 NIGSLFSPTLV 92 (372)
T ss_dssp HHHHHHHHHCC
T ss_pred hhhhHhhcccc
Confidence 99999988765
No 261
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=93.17 E-value=12 Score=38.60 Aligned_cols=154 Identities=14% Similarity=0.088 Sum_probs=79.1
Q ss_pred ccchhHHHHHHHHHHhhhhhhhHhhhhcCCCCC---CChhhhhHHHHHHHH-HHHhhhchhhhhhhccchhHHHHHHHHH
Q 012075 22 YNSPLVQVCLIGLVCFCCPGMFNALSGMGGGGQ---VDTTAANNANTALYT-TFTIFGILGGGIYNILGPQVTLISACST 97 (471)
Q Consensus 22 ~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~-~~~i~~~~~g~l~d~~Grk~~l~i~~~~ 97 (471)
.+.-+...+.+++.+++....|+.+-++..+.. ++++.....-..... +..+..++-..+.+++-|.+.+-+-...
T Consensus 22 ~r~E~~kflpl~Ll~f~I~~ny~~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~ 101 (509)
T COG3202 22 RRYELKKFLPLALLFFCILFNYNLLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGF 101 (509)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 334555678888888777766776655544311 122221111111111 2233446778899999998887766654
Q ss_pred HHHHHHHH---Hhhh---cccc-----------------------hHHHHHHHHHHhhhhhHHHh-hhhhhhccCCCCCc
Q 012075 98 YVLYAGSF---LYYN---HHKH-----------------------QAFAIAAGAILGIGAGLLWA-AEGAIMTSYPPPNR 147 (471)
Q Consensus 98 ~~~~~~~~---~~~~---~~~~-----------------------~~~li~~r~l~G~g~g~~~~-~~~~~i~~~~~~~~ 147 (471)
|..+.+-+ +++. ..++ .|..-+.-+..=+-.+.... .--....|+.+.+|
T Consensus 102 F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~e 181 (509)
T COG3202 102 FLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEE 181 (509)
T ss_pred HHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 43322211 1100 0011 12111111111111111000 11223456777889
Q ss_pred hhhHHHHHHHHHHhhhhhhhHHHHHhhc
Q 012075 148 KGTYISIFWSIFNMGGVIGGLIPFILNY 175 (471)
Q Consensus 148 RG~~~g~~~~~~~~G~~iG~~i~~~~~~ 175 (471)
-.|..+++....+++..+++.+...++.
T Consensus 182 akRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 182 AKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999998887655554
No 262
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=92.83 E-value=4.5 Score=39.69 Aligned_cols=125 Identities=13% Similarity=0.048 Sum_probs=78.2
Q ss_pred hhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHH
Q 012075 78 GGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWS 157 (471)
Q Consensus 78 ~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~ 157 (471)
.-.+.|..-.|+++++-.+.+.. .....-..++.+.+=+.-++-|...+. -.+-.+|+=+..+|+++-|.+|.--+
T Consensus 62 vFlLTD~lrYKPvivlq~ls~v~---~w~~lv~g~sV~~mQvlE~FyG~~tAa-EIAYysYIYs~Vd~~~Yqrvt~y~Ra 137 (433)
T KOG3810|consen 62 VFLLTDYLRYKPVVVLQALSGVP---VWIMLVFGPSVKAMQVLEFFYGPATAA-EIAYYSYIYSKVDPEMYKRVTGYCRA 137 (433)
T ss_pred HHHHhhhhhcceeeeeeccchhH---HHHHHHhcCCchheeeehhhcChHHHH-HHhhhheeeeecCHHHHHHHHHHhHH
Confidence 34578999999998888765433 111111257777776777777776664 34556777777899999999999988
Q ss_pred HHHhhhhhhhHHHHHhhccCCCccccccchhHHHHHHHHHHHHHHHhccCCC
Q 012075 158 IFNMGGVIGGLIPFILNYNRNEAVSVNDGTYIGFMCFMSAGALLSLVILPPG 209 (471)
Q Consensus 158 ~~~~G~~iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~p~ 209 (471)
..-.|-..|...+-.+..... .+....-++ -..-+.+..+++.++++|+
T Consensus 138 A~L~g~~~g~vlaQlLvs~~~--~sy~~LN~I-SL~~~~ia~~~A~fLP~v~ 186 (433)
T KOG3810|consen 138 AFLVGKFVGSVLAQLLVSLET--LSYTTLNYI-SLAEVTIAVLLALFLPRVK 186 (433)
T ss_pred HHHHHhHHHhHHHHHHhhhcc--cchhhhchh-hHHHHHHHHHHHhhCCCCc
Confidence 888888888887744432110 111111122 2334455556667775554
No 263
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=92.57 E-value=14 Score=37.86 Aligned_cols=125 Identities=9% Similarity=-0.091 Sum_probs=62.9
Q ss_pred ccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCC
Q 012075 268 QFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSG 347 (471)
Q Consensus 268 ~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (471)
+++....+..-....+.++.|+++..++.+| +|-.+.++++......+..+... ..+ .+.+ +...
T Consensus 289 G~s~~~igi~R~~gav~Gl~gT~~~p~l~~r--iGlvr~G~~~l~~q~~~L~~~v~--~~~---~~~~------~~~~-- 353 (432)
T PF06963_consen 289 GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKR--IGLVRAGLWSLWWQWVCLALCVV--SFW---APGS------PFSS-- 353 (432)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcchhhHHHHHHHHHHHHHHHHH--HHh---cCCC------Cchh--
Confidence 3343344444455567788888888888887 77777777776555322222211 111 1110 0000
Q ss_pred CCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 348 SDFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 348 ~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
.+....+...++-=++--++--...-++.|.. +++++++..|+....|++.-.+.+...-
T Consensus 354 ~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V-~~~~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 354 ISAYLLLGGIALSRIGLWSFDLAVTQIMQENV-PESERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHhhcccC-CHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 11111111111111111111111122344544 3456689999999999999999998764
No 264
>PF12832 MFS_1_like: MFS_1 like family
Probab=92.27 E-value=0.77 Score=34.52 Aligned_cols=43 Identities=7% Similarity=-0.049 Sum_probs=35.1
Q ss_pred CChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHH
Q 012075 55 VDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACST 97 (471)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~ 97 (471)
.++.+.+...++......++++++|.++||+||++..+.....
T Consensus 32 l~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 32 LSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 3466667777788888888999999999999998888777654
No 265
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=91.05 E-value=0.99 Score=45.61 Aligned_cols=40 Identities=15% Similarity=0.098 Sum_probs=31.9
Q ss_pred hhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhH
Q 012075 273 TRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVV 314 (471)
Q Consensus 273 ~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~ 314 (471)
...+.+.++.+..+.-.+.+.++.|| +|-|...+++....
T Consensus 80 ~~~wlsmIym~v~vp~gf~~mw~ldk--~GLR~a~llgt~ln 119 (480)
T KOG2563|consen 80 AADWLSMIYMVVSVPFGFAAMWILDK--FGLRTALLLGTVLN 119 (480)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHhhcc--cchHHHHHHHHHHH
Confidence 34566778889999888888899999 78888777776655
No 266
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=91.04 E-value=1.4 Score=45.19 Aligned_cols=102 Identities=14% Similarity=0.074 Sum_probs=69.3
Q ss_pred hhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhh----c---ccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCC
Q 012075 73 IFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYN----H---HKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPP 145 (471)
Q Consensus 73 i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~----~---~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~ 145 (471)
+|..+......+..-|+.+..+.++.++.....+..- . -++.++.+.-.++..+...+.+......++|++|+
T Consensus 270 ~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~ 349 (433)
T PF03092_consen 270 LGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPK 349 (433)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3444444555566677778777776554222111000 0 12335556667777777777777778889999999
Q ss_pred CchhhHHHHHHHHHHhhhhhhhHHHHHhh
Q 012075 146 NRKGTYISIFWSIFNMGGVIGGLIPFILN 174 (471)
Q Consensus 146 ~~RG~~~g~~~~~~~~G~~iG~~i~~~~~ 174 (471)
..-|...++..+..++|..++..++..+.
T Consensus 350 G~Egt~yall~s~~Nlg~~~s~~lg~~l~ 378 (433)
T PF03092_consen 350 GSEGTVYALLASFSNLGSSVSSTLGAFLM 378 (433)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888875443
No 267
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=88.68 E-value=4.9 Score=41.52 Aligned_cols=100 Identities=18% Similarity=0.227 Sum_probs=75.4
Q ss_pred HHHHHHHhhhch-hhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCC
Q 012075 66 ALYTTFTIFGIL-GGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPP 144 (471)
Q Consensus 66 ~~~~~~~i~~~~-~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~ 144 (471)
.......+++++ .+.+...+|-|+...+|.+.-.+ .....+++++.|+++...++.++.... .++.-+.++.+.+
T Consensus 285 ~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~---~~~~~af~~~~w~~~~~~v~~~~~~~~-~pa~~s~~s~~v~ 360 (463)
T KOG2816|consen 285 LVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFL---QLLLFAFATETWMMFAAGVVVALAGIV-FPAIRAFASILVS 360 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHH---HHHHHHHhccchhhhHHHHHHHhhcch-hHHHHhHHHhhcc
Confidence 334444566655 45788889999977777765443 223335578999999999888776554 5566777888889
Q ss_pred CCchhhHHHHHHHHHHhhhhhhhHH
Q 012075 145 PNRKGTYISIFWSIFNMGGVIGGLI 169 (471)
Q Consensus 145 ~~~RG~~~g~~~~~~~~G~~iG~~i 169 (471)
++++|+..++......+...+++.+
T Consensus 361 ~~e~g~v~~~is~i~~l~~~~~~~~ 385 (463)
T KOG2816|consen 361 PEEQGKVFGIISGIEGLSGVVSPAL 385 (463)
T ss_pred cccccchhhHHHHHHHHhhhhhHHH
Confidence 9999999999999999999988876
No 268
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=88.28 E-value=11 Score=37.98 Aligned_cols=62 Identities=11% Similarity=0.068 Sum_probs=54.3
Q ss_pred ccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHH
Q 012075 111 HKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFI 172 (471)
Q Consensus 111 ~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~ 172 (471)
-++.|.+++.-+..|+-.|...+-....+.|-.++++|...+|.-....+.|..++.+++..
T Consensus 332 ipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~ 393 (402)
T PF02487_consen 332 IPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLP 393 (402)
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 47889888999999999999887777777777799999999999999999999999998753
No 269
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=85.64 E-value=0.21 Score=52.67 Aligned_cols=137 Identities=17% Similarity=0.135 Sum_probs=2.7
Q ss_pred ccccc--chhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeee-hhhhHHHHHHHHHHhHhhhhccc--CCCCC----
Q 012075 267 LQFNL--RTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFV-GIVVVALLGSAIWAGGLANQLNY--SHDKP---- 337 (471)
Q Consensus 267 ~~~~~--~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~-g~~~~~~~~~~~~~~~~~~~~~~--~~~~~---- 337 (471)
..|++ ++.++....+-++.++..++..++.+| ++|++++- |..++ .++.+++..=..+...| ...+.
T Consensus 31 rRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~---~hrprwig~g~~~~-~~g~~l~~lPhf~~~~y~~~~~~~~~~~ 106 (539)
T PF03137_consen 31 RRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGR---GHRPRWIGIGALLM-GLGSLLFALPHFLSGPYSYEEASNSNGN 106 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCCcceeeecHHHH-HHHHHHHhccHhhcCCCccccccccccc
Confidence 34443 356788888899999998888888876 56776643 33333 23333321100000011 10000
Q ss_pred ---CCccC----------------C-CCCC--CCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHH
Q 012075 338 ---PAKLD----------------F-KNSG--SDFAGPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGV 395 (471)
Q Consensus 338 ---~~~~~----------------~-~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 395 (471)
..... . .+.+ .-+...++.-++.|++..-.++.-.++++|... +++.....|+....
T Consensus 107 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~-~~~splYiGi~~~~ 185 (539)
T PF03137_consen 107 SSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVS-KKNSPLYIGILYAM 185 (539)
T ss_dssp ---------------------------------------------SSS--------------------------------
T ss_pred cccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccc-cccCccchhhhhHH
Confidence 00000 0 0000 112334566678888888888888889999873 44557888999999
Q ss_pred HHHHHHHHhhhcc
Q 012075 396 QSAGAAVAWQVDT 408 (471)
Q Consensus 396 ~s~g~~i~~~~~~ 408 (471)
..+|-+++|.+++
T Consensus 186 ~~lGPa~Gf~lg~ 198 (539)
T PF03137_consen 186 SILGPALGFLLGS 198 (539)
T ss_dssp -------------
T ss_pred hhccHHHHHHHHH
Confidence 9999999998874
No 270
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=84.33 E-value=9.4 Score=35.88 Aligned_cols=29 Identities=17% Similarity=0.273 Sum_probs=17.7
Q ss_pred hHHHHHHHHHHHHhhhhhhhcccCCCCccc
Q 012075 276 LNNVFYWGAQMLGSVGIGYIFDFSFPTRRK 305 (471)
Q Consensus 276 l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~ 305 (471)
...+++-++..+|....|.+... ...||+
T Consensus 145 ~~~I~fv~g~~~G~~~ig~~nkt-~~kRk~ 173 (267)
T PF07672_consen 145 IFQILFVAGYFLGPFTIGLWNKT-NYKRKP 173 (267)
T ss_pred HHHHHHHHHHhhhceeeccchhh-hhhhhh
Confidence 34455666666777777776644 345655
No 271
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=84.24 E-value=18 Score=37.76 Aligned_cols=45 Identities=9% Similarity=-0.018 Sum_probs=35.5
Q ss_pred ChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHH
Q 012075 56 DTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVL 100 (471)
Q Consensus 56 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~ 100 (471)
++.......++.-+...++++++|+++||+-+|+.+++++++-.+
T Consensus 44 ~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v 88 (618)
T KOG3762|consen 44 NPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSV 88 (618)
T ss_pred CHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHH
Confidence 355556667777788889999999999999998888888875433
No 272
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=83.18 E-value=0.41 Score=46.65 Aligned_cols=61 Identities=18% Similarity=0.268 Sum_probs=3.5
Q ss_pred cchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHH
Q 012075 112 KHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFI 172 (471)
Q Consensus 112 ~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~ 172 (471)
+|.+..++.-++.|+..|-..+....+..+..++++|..+-.+......+|..+|..+++.
T Consensus 246 ~~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 246 NSDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp ---------------------HHHH------------------------------------
T ss_pred cchHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556677888899999999988888888888889999988888888888898888888753
No 273
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=82.59 E-value=5.6 Score=43.06 Aligned_cols=114 Identities=13% Similarity=0.000 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHH
Q 012075 278 NVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLY 357 (471)
Q Consensus 278 ~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (471)
....+.+.+ ..+++|.+.|++ +||++...++.++. .++..+.. +. ..+ +..+ . ......++..
T Consensus 30 ~~f~~l~yl-~pilGg~iAD~~-lG~~~tIl~~~ii~-~lG~~lla----i~-a~~-----~~~~--~--~~~~~~l~gL 92 (654)
T TIGR00926 30 HTFTYLCYL-TPLIGAIIADGW-LGKFKTILYLSIVY-VVGHALLS----FG-AIP-----SSGH--P--LHDLLDLLGL 92 (654)
T ss_pred HHHHHHHHH-HHHHHHHHHHHH-hhhHHHHHHHHHHH-HHHHHHHH----hc-cCc-----cccc--c--hHHHHHHHHH
Confidence 333344443 445678899984 89999776665544 23322211 00 001 0001 0 1111234444
Q ss_pred HHHHhhHHHHHHHHHHHHHHhcC--CchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 358 FCYGLLDAMFQSMVYWVIGALAD--DSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 358 ~~~g~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
.+...+.+...+.+-+..++.++ +.+++.+.+.++.+..++|+.++..+.+
T Consensus 93 aLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~ 145 (654)
T TIGR00926 93 ALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITP 145 (654)
T ss_pred HHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566677777777777888773 2334677888888888888887766554
No 274
>PF12832 MFS_1_like: MFS_1 like family
Probab=82.06 E-value=2 Score=32.27 Aligned_cols=40 Identities=18% Similarity=0.104 Sum_probs=32.2
Q ss_pred cccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceee
Q 012075 267 LQFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGF 308 (471)
Q Consensus 267 ~~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~ 308 (471)
.+++..+.++.........+++.++.|.+.|| .+|++..+
T Consensus 30 ~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk--~~~~~~~l 69 (77)
T PF12832_consen 30 LGLSPSQIGILSAIRPLIRFLAPPLWGFLADK--FGKRKVIL 69 (77)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCccHHHH
Confidence 34566678888888899999999999999999 67777443
No 275
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.40 E-value=10 Score=38.95 Aligned_cols=92 Identities=13% Similarity=0.092 Sum_probs=61.7
Q ss_pred hhchhhhh---hhccchhHHHHHHHHHHHHHHHHHHhhh--ccc-------------chHHHHHHHHHHhhhhhHHHhhh
Q 012075 74 FGILGGGI---YNILGPQVTLISACSTYVLYAGSFLYYN--HHK-------------HQAFAIAAGAILGIGAGLLWAAE 135 (471)
Q Consensus 74 ~~~~~g~l---~d~~Grk~~l~i~~~~~~~~~~~~~~~~--~~~-------------~~~~li~~r~l~G~g~g~~~~~~ 135 (471)
++.+.+.+ ++++||++.+.++.++..++........ .++ +.....+..++.|++-+...+..
T Consensus 295 ~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~ 374 (461)
T KOG3098|consen 295 GGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQR 374 (461)
T ss_pred HHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHH
Confidence 34444444 5679999999999987766433322211 111 23456778899999999988888
Q ss_pred hhhhccCCCCCchhhHHHHHHHHHHhhhhhh
Q 012075 136 GAIMTSYPPPNRKGTYISIFWSIFNMGGVIG 166 (471)
Q Consensus 136 ~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG 166 (471)
..++.+.. |++|..+.+++-.-..++..++
T Consensus 375 ~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~ 404 (461)
T KOG3098|consen 375 YVIIALLY-PDDRAQAFSLFKFYQSVASCVA 404 (461)
T ss_pred HHHHHHHh-cCchHHHHHHHHHHHHHHHHHH
Confidence 88888876 7788877777765555554443
No 276
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=80.64 E-value=22 Score=36.33 Aligned_cols=98 Identities=12% Similarity=-0.023 Sum_probs=59.1
Q ss_pred HhhhchhhhhhhccchhHHHHHHHHHHHHHH----HHHHhhhccc----chHHHHHHHHHHhhhhhHHHhhhhhhhccCC
Q 012075 72 TIFGILGGGIYNILGPQVTLISACSTYVLYA----GSFLYYNHHK----HQAFAIAAGAILGIGAGLLWAAEGAIMTSYP 143 (471)
Q Consensus 72 ~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~----~~~~~~~~~~----~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~ 143 (471)
..+.+..+++.+|+|..++=+++...-..+. .+++.. ..+ +...++.+=++.-+|-=..=-+..-++-|..
T Consensus 307 l~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~-~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V 385 (432)
T PF06963_consen 307 LLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAP-GSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENV 385 (432)
T ss_pred HHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcC-CCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccC
Confidence 3455889999999998887777765332221 222221 111 1122333333333332222234566677888
Q ss_pred CCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 144 PPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 144 ~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
|+++||...|...+..++--++-..+.
T Consensus 386 ~~~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 386 PESERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred CHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988888777766654
No 277
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=79.80 E-value=77 Score=32.53 Aligned_cols=52 Identities=23% Similarity=0.269 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 114 QAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 114 ~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
.+..++.-++.|++.+......-.+.+.. |++ .++.++.+..++.+++.++.
T Consensus 106 f~~~~~~v~~~g~~~~~~q~s~~gla~~f-p~~----~~~a~~~G~g~aGv~~s~~~ 157 (437)
T TIGR00939 106 FVTTMASVVIINSGMALLQGSLFGLAGVF-PST----YSSAVMSGQGLAGVLTSLAM 157 (437)
T ss_pred HHHHHHHHHHHHhhhhhhcccchhhcccC-CHH----HHHHHHhcchhHHHHHHHHH
Confidence 45567777888999888766656665544 432 45555555555555555443
No 278
>PRK03612 spermidine synthase; Provisional
Probab=79.00 E-value=41 Score=35.37 Aligned_cols=111 Identities=9% Similarity=0.071 Sum_probs=56.2
Q ss_pred hhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHH-HHHHHHHHH--hhhcccch-HHHHHHHHHHhhhhhHHHhh
Q 012075 59 AANNANTALYTTFTIFGILGGGIYNILGPQVTLISACST-YVLYAGSFL--YYNHHKHQ-AFAIAAGAILGIGAGLLWAA 134 (471)
Q Consensus 59 ~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~-~~~~~~~~~--~~~~~~~~-~~li~~r~l~G~g~g~~~~~ 134 (471)
.-+..+++..++.++|+.+++.+.++.-|+...+-..+. ........+ ........ ..++..-++.|+-.|...+.
T Consensus 51 ~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl 130 (521)
T PRK03612 51 QFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPL 130 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667788888999998888776444444332211110 000000000 00000011 12233344455555554444
Q ss_pred hhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHH
Q 012075 135 EGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 135 ~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 170 (471)
..-+..+. ..++-|+..|-......+|.++|.++.
T Consensus 131 ~~~~~~~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~ 165 (521)
T PRK03612 131 LMRILQRI-RDQHLGHNVATVLAADYLGALVGGLAF 165 (521)
T ss_pred HHHHHHhc-cccchhhhhhhhHhHHhHHHHHHHHHH
Confidence 33333322 122346777888888899999998885
No 279
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=77.93 E-value=34 Score=36.42 Aligned_cols=102 Identities=18% Similarity=0.130 Sum_probs=63.0
Q ss_pred HHHHhhhchhhhhhhc-cchhHHHHHHHHHHHHHHHHHHhhh----cc-------------c--c---hHHHHHHHHHHh
Q 012075 69 TTFTIFGILGGGIYNI-LGPQVTLISACSTYVLYAGSFLYYN----HH-------------K--H---QAFAIAAGAILG 125 (471)
Q Consensus 69 ~~~~i~~~~~g~l~d~-~Grk~~l~i~~~~~~~~~~~~~~~~----~~-------------~--~---~~~li~~r~l~G 125 (471)
+...+.+++++.++|. +||-+++.++++++.+.....-..+ .- + + ...++.+.-+..
T Consensus 84 G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia 163 (571)
T KOG1237|consen 84 GTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIA 163 (571)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHhe
Confidence 3334556889999996 7999999999998876533211111 00 0 1 124666667777
Q ss_pred hhhhHHHhhhhhhhccCCC----CCchh--hHHHHHHHHHHhhhhhhhHHH
Q 012075 126 IGAGLLWAAEGAIMTSYPP----PNRKG--TYISIFWSIFNMGGVIGGLIP 170 (471)
Q Consensus 126 ~g~g~~~~~~~~~i~~~~~----~~~RG--~~~g~~~~~~~~G~~iG~~i~ 170 (471)
+|.|..-+.....-+|-.+ ++.+. ..+.++....+.|..++..+.
T Consensus 164 ~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~ 214 (571)
T KOG1237|consen 164 LGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVL 214 (571)
T ss_pred eccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHH
Confidence 7888754444444444444 33333 677888777788777765553
No 280
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=77.01 E-value=8.8 Score=29.42 Aligned_cols=55 Identities=20% Similarity=0.178 Sum_probs=42.6
Q ss_pred hhhcCCCCCCChhhhhHHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHH
Q 012075 46 LSGMGGGGQVDTTAANNANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVL 100 (471)
Q Consensus 46 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~ 100 (471)
+..++.+...+...++...+..|.++.+|++....+.++..++..+..+.+.-.+
T Consensus 15 LP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~ 69 (85)
T PF06779_consen 15 LPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVL 69 (85)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 3444455556677788888899999999999999999998878888877765444
No 281
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=75.51 E-value=19 Score=36.27 Aligned_cols=61 Identities=16% Similarity=0.227 Sum_probs=50.1
Q ss_pred cchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHH
Q 012075 112 KHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPFI 172 (471)
Q Consensus 112 ~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~ 172 (471)
.+.+.++..-.+.|+..|=.......+..+-.|++++-.+-.+.......|...|.++++.
T Consensus 341 ~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l 401 (406)
T KOG1479|consen 341 ESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWV 401 (406)
T ss_pred cCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 4667788999999999999888888888777788888888777777788888888888753
No 282
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=74.71 E-value=28 Score=30.12 Aligned_cols=88 Identities=14% Similarity=0.158 Sum_probs=47.5
Q ss_pred HHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhHHHHHHHH
Q 012075 281 YWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGPFVLYFCY 360 (471)
Q Consensus 281 ~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (471)
......+++++...+.++ +|.|+.+.+|.+.. ..+.... .+ +.....+....+.
T Consensus 46 ~Y~~~~~s~l~~P~iv~~--lg~K~sm~lg~~~y-----~~y~~~~----~~---------------~~~~~l~~~s~l~ 99 (156)
T PF05978_consen 46 LYGSFAISCLFAPSIVNK--LGPKWSMILGSLGY-----AIYIASF----FY---------------PNSYTLYPASALL 99 (156)
T ss_pred HHHHHHHHHHhHHHHHHH--HhhHHHHHHHHHHH-----HHHHHHH----Hh---------------hhHHHHHHHHHHH
Confidence 344444555555566777 78887665554332 2222111 11 2223456777788
Q ss_pred HhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHH
Q 012075 361 GLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGV 395 (471)
Q Consensus 361 g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 395 (471)
|++.+..++..-.++.+..+ ++++++..+++-.+
T Consensus 100 G~~~a~lW~aqg~ylt~~s~-~~~~~~~~~ifw~i 133 (156)
T PF05978_consen 100 GFGAALLWTAQGTYLTSYST-EETIGRNTGIFWAI 133 (156)
T ss_pred hhhhHHhhHhhhHHHHHcCC-HHHHhhHHHHHHHH
Confidence 88877776665566777763 23335555444443
No 283
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=68.57 E-value=42 Score=31.64 Aligned_cols=92 Identities=17% Similarity=0.237 Sum_probs=47.4
Q ss_pred HHHHHHHHHhhhchhhhhhhccchhHHHHHHHH--HHHHHHHHHHhh-hccc----chHHHHHHHHHHhhhhhHHHhhhh
Q 012075 64 NTALYTTFTIFGILGGGIYNILGPQVTLISACS--TYVLYAGSFLYY-NHHK----HQAFAIAAGAILGIGAGLLWAAEG 136 (471)
Q Consensus 64 ~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~--~~~~~~~~~~~~-~~~~----~~~~li~~r~l~G~g~g~~~~~~~ 136 (471)
.-+...+..+|++..|+.+..-=+|+.++...+ ....+..+.++. .... +.+.+++.-++.|+. .|..|+
T Consensus 147 ~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f---~WgiQ~ 223 (267)
T PF07672_consen 147 QILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFF---LWGIQG 223 (267)
T ss_pred HHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHH---HHhhhH
Confidence 334455566777888888876444444433221 111112222221 1111 245677777766644 488888
Q ss_pred hhhc---cC--CCCCchhhHHHHHHHH
Q 012075 137 AIMT---SY--PPPNRKGTYISIFWSI 158 (471)
Q Consensus 137 ~~i~---~~--~~~~~RG~~~g~~~~~ 158 (471)
+.+. |+ ++|++-|...|+.|..
T Consensus 224 ViL~lPhEyK~~~pk~ig~~Fg~iWGf 250 (267)
T PF07672_consen 224 VILNLPHEYKGYNPKKIGIQFGLIWGF 250 (267)
T ss_pred HHhcChhhhcCCCcceehhHHHHHHHH
Confidence 8763 22 2456666666665543
No 284
>PF10951 DUF2776: Protein of unknown function (DUF2776); InterPro: IPR021240 This bacterial family of proteins has no known function.
Probab=60.63 E-value=8.4 Score=36.30 Aligned_cols=49 Identities=18% Similarity=0.302 Sum_probs=32.1
Q ss_pred hhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHH
Q 012075 80 GIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLL 131 (471)
Q Consensus 80 ~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~ 131 (471)
++++|+- .+=+-..+.++|..+++.-....|...++.+|++.|+|+=..
T Consensus 285 ~LAnRIP---lIPV~TaL~CLFlaAFlfE~~~~~~~yFvPARVL~GLGaICF 333 (347)
T PF10951_consen 285 KLANRIP---LIPVLTALACLFLAAFLFEAATVDMAYFVPARVLVGLGAICF 333 (347)
T ss_pred chhccCC---chHHHHHHHHHHHHHHHHHHhhcccceeeehhHhhccchHHH
Confidence 3555544 333444455666677766444467778999999999987654
No 285
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=52.69 E-value=15 Score=28.11 Aligned_cols=44 Identities=11% Similarity=0.135 Sum_probs=31.0
Q ss_pred ccccchhhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhh
Q 012075 268 QFNLRTRGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVV 313 (471)
Q Consensus 268 ~~~~~~~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~ 313 (471)
.++..+.++......+|.++|.+...++.++ ..++...+.+.+.
T Consensus 23 ~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~--~~~~~~~~~~l~~ 66 (85)
T PF06779_consen 23 GLSLSQAGWLASANYLGYLVGALLASRLPRH--SRPRRLLRAGLLL 66 (85)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHH
Confidence 5566677777788899999999988887776 3445545555443
No 286
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=51.77 E-value=42 Score=36.60 Aligned_cols=56 Identities=13% Similarity=0.122 Sum_probs=40.3
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 012075 352 GPFVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDT 408 (471)
Q Consensus 352 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~~~~ 408 (471)
+.++.-++.|++..-.++.-.+|+++...+ .+....+|+...+..+|=+++|.+++
T Consensus 239 lff~~q~l~GIG~Tpi~tlGisYiDDnvk~-~~SplYlgi~~~~~~lGPaiGfllgS 294 (735)
T KOG3626|consen 239 LFFLGQLLLGIGATPIFTLGISYIDDNVKK-KNSPLYLGILYSMAILGPAIGFLLGS 294 (735)
T ss_pred HHHHHHHHhhcCCCCCccCCCccccccccc-cCCcHHHHHHHHHHHhhhHHHHHHHH
Confidence 344555566777666666666678887732 35578889999999999999998764
No 287
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=50.41 E-value=1.5e+02 Score=26.97 Aligned_cols=108 Identities=20% Similarity=0.194 Sum_probs=57.5
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhcccCCCCccceeeehhhhHHHHHHHHHHhHhhhhcccCCCCCCCccCCCCCCCCchhH
Q 012075 274 RGLNNVFYWGAQMLGSVGIGYIFDFSFPTRRKRGFVGIVVVALLGSAIWAGGLANQLNYSHDKPPAKLDFKNSGSDFAGP 353 (471)
Q Consensus 274 ~~l~~~~~~i~~i~g~~~~g~l~D~~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (471)
.++......+...++.++.|.+.|| .|||+....+.... ...... .... . . . .....
T Consensus 41 ~~~~~~~~~~~~~~~~~~~g~l~d~--~g~~~~~~~~~~~~-~~~~~~----~~~~---~--------~--~---~~~~~ 97 (338)
T COG0477 41 YGLLLSAFFLGYAIGSLLAGPLGDR--YGRRKVLIIGLLLF-LLGTLL----LALA---P--------N--V---GLALL 97 (338)
T ss_pred HHHHHHHHHHHHHHHhhhhhhcccc--ccchHHHHHHHHHH-HHHHHH----HHhC---c--------c--c---hHHHH
Confidence 4555566677777777889999999 58985444443221 111011 1100 0 1 0 12223
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHH-HHHHHHHHHh
Q 012075 354 FVLYFCYGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKG-VQSAGAAVAW 404 (471)
Q Consensus 354 ~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~s~g~~i~~ 404 (471)
.+.....|+..+...+....++.+.+++..+++...+.... ...++..++.
T Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (338)
T COG0477 98 LILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGP 149 (338)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444467777777777788888888430133555555544 2334444443
No 288
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=47.71 E-value=67 Score=31.86 Aligned_cols=58 Identities=3% Similarity=-0.109 Sum_probs=46.6
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHhc-CC-chhhhHHHHHHHHHHHHHHHHHhhhccc
Q 012075 352 GPFVLYFCYGLLDAMFQSMVYWVIGALA-DD-SETLSRYSGFYKGVQSAGAAVAWQVDTH 409 (471)
Q Consensus 352 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~-~~-~~~~~~~~~~~~~~~s~g~~i~~~~~~~ 409 (471)
..++...+.+++.++.-+.+....++.+ ++ ++++.+.+..+....++|..++....+.
T Consensus 35 ~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~ 94 (372)
T PF00854_consen 35 LFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPY 94 (372)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchh
Confidence 4566666788999999999999999988 44 5667788888999999999999887653
No 289
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=39.95 E-value=4.2e+02 Score=26.90 Aligned_cols=33 Identities=6% Similarity=0.132 Sum_probs=19.1
Q ss_pred hHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCc
Q 012075 114 QAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNR 147 (471)
Q Consensus 114 ~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~ 147 (471)
+...++.-++.|++.|....+--...++. |++.
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~y 149 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEY 149 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHH
Confidence 34556677777888777554444444444 4443
No 290
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=37.73 E-value=1.7e+02 Score=25.22 Aligned_cols=83 Identities=12% Similarity=0.083 Sum_probs=46.1
Q ss_pred hhhhccchhHHHHHHH---HHHHHHHHHHHhhhc----ccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHH
Q 012075 80 GIYNILGPQVTLISAC---STYVLYAGSFLYYNH----HKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYI 152 (471)
Q Consensus 80 ~l~d~~Grk~~l~i~~---~~~~~~~~~~~~~~~----~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~ 152 (471)
.++||.-||..+..|. +.+.++.+.++.... .++...+++.-.+.|+|.-. ....+++.-+++++-|...
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllG---isYGilSaSWD~~r~GSll 132 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLG---ISYGILSASWDPEREGSLL 132 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHh---hhhhhcccccCCCCCCCcc
Confidence 4678888888777765 223333333222110 12233444444444444333 2344455566899999999
Q ss_pred HHHHHHHHhhhhh
Q 012075 153 SIFWSIFNMGGVI 165 (471)
Q Consensus 153 g~~~~~~~~G~~i 165 (471)
|+-..-.+++-+.
T Consensus 133 G~~e~~~N~~r~~ 145 (153)
T PF11947_consen 133 GWEEFKRNWGRMW 145 (153)
T ss_pred cHHHHHHhHHHHH
Confidence 9887777766543
No 291
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=36.16 E-value=5.2e+02 Score=26.87 Aligned_cols=49 Identities=8% Similarity=0.159 Sum_probs=26.7
Q ss_pred HHHHHHhhHHHHHH-HHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhh
Q 012075 356 LYFCYGLLDAMFQS-MVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQ 405 (471)
Q Consensus 356 ~~~~~g~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~s~g~~i~~~ 405 (471)
.++....+.....+ .-|....|+++ .++..|-++++....++|..++-.
T Consensus 134 FYv~~elw~~~vvS~lFW~fandi~t-~~qakRfy~l~~~ganlg~i~sg~ 183 (472)
T TIGR00769 134 FYVMAELWGSVVLSLLFWGFANQITT-IDEAKRFYALFGLGANVALIFSGR 183 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444444444 34446778873 334457777766666666655543
No 292
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=34.83 E-value=1.2e+02 Score=32.31 Aligned_cols=59 Identities=14% Similarity=0.186 Sum_probs=50.1
Q ss_pred chHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 113 HQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 113 ~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
+.+.++.--++.|++..+..+.+--+.=+-+|++.|...++++.....+|..++.++..
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~ 515 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVS 515 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678899999999999988876666555679999999999999999999999888763
No 293
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=24.59 E-value=1.1e+02 Score=30.54 Aligned_cols=91 Identities=13% Similarity=0.012 Sum_probs=59.9
Q ss_pred HHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhccCC
Q 012075 64 NTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYP 143 (471)
Q Consensus 64 ~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~ 143 (471)
-++..+..+++.++.|.+.-.+.|..-++++..--.. .+..+..+.+++.|..+++-++-+.--....+.+..-+++.-
T Consensus 277 eAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~-agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL 355 (433)
T KOG3810|consen 277 EAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQ-AGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNL 355 (433)
T ss_pred HHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHh-hhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhh
Confidence 3455566788899999999888887555555431111 122333345678888888777777666666666666666666
Q ss_pred CCCchhhHHHHH
Q 012075 144 PPNRKGTYISIF 155 (471)
Q Consensus 144 ~~~~RG~~~g~~ 155 (471)
..+.-|..+|+-
T Consensus 356 ~~e~~gLvFGiN 367 (433)
T KOG3810|consen 356 SSELFGLVFGIN 367 (433)
T ss_pred hhhhheeeeehH
Confidence 777777777764
No 294
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=24.04 E-value=2.2e+02 Score=27.93 Aligned_cols=61 Identities=13% Similarity=0.083 Sum_probs=44.7
Q ss_pred ccchHHHHHHHHHHhhhhhHHHhhhhhhhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHH
Q 012075 111 HKHQAFAIAAGAILGIGAGLLWAAEGAIMTSYPPPNRKGTYISIFWSIFNMGGVIGGLIPF 171 (471)
Q Consensus 111 ~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~ 171 (471)
.+++|...+.=+.-|+-.|...+..--=+.+-.+|++|-.+++.-....++|..++..++.
T Consensus 339 tpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 339 TPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred ccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 6788887777888887777655433333444458999999999988888888887777653
No 295
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.28 E-value=71 Score=25.52 Aligned_cols=21 Identities=24% Similarity=0.490 Sum_probs=14.4
Q ss_pred hhhhhhcccCCCCccceeeehh
Q 012075 290 VGIGYIFDFSFPTRRKRGFVGI 311 (471)
Q Consensus 290 ~~~g~l~D~~~~gRr~~~~~g~ 311 (471)
...|++.||+ .|-+|..++.+
T Consensus 60 a~iG~llD~~-agTsPwglIv~ 80 (116)
T COG5336 60 AGIGWLLDKF-AGTSPWGLIVF 80 (116)
T ss_pred HHHHHHHHHh-cCCCcHHHHHH
Confidence 3467899995 68888555443
No 296
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=21.78 E-value=2.8e+02 Score=28.16 Aligned_cols=92 Identities=13% Similarity=-0.008 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHhhhchhhhhhhccchhHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHhhhhhHHHhhhhhhhcc
Q 012075 62 NANTALYTTFTIFGILGGGIYNILGPQVTLISACSTYVLYAGSFLYYNHHKHQAFAIAAGAILGIGAGLLWAAEGAIMTS 141 (471)
Q Consensus 62 ~~~~~~~~~~~i~~~~~g~l~d~~Grk~~l~i~~~~~~~~~~~~~~~~~~~~~~~li~~r~l~G~g~g~~~~~~~~~i~~ 141 (471)
..-++..+..+++.+..|.+..++.+-.-+.++.+.... .++.+..+..+|.|..+++-++-+..--+..+.+..-++.
T Consensus 289 ~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~-a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~ 367 (412)
T PF01770_consen 289 AVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQ-AGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAK 367 (412)
T ss_pred HHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555666788889999997777775555555443221 1223333456889988888888877777766655555555
Q ss_pred CCCCCchhhHHHH
Q 012075 142 YPPPNRKGTYISI 154 (471)
Q Consensus 142 ~~~~~~RG~~~g~ 154 (471)
....+.-|..+|+
T Consensus 368 ~l~~e~yaLVFGi 380 (412)
T PF01770_consen 368 NLSEERYALVFGI 380 (412)
T ss_pred hccccceeeeeee
Confidence 5455555555544
No 297
>COG4810 EutS Ethanolamine utilization protein [Amino acid transport and metabolism]
Probab=21.38 E-value=18 Score=28.17 Aligned_cols=19 Identities=32% Similarity=0.352 Sum_probs=15.5
Q ss_pred ccC-CCccCccccccCcCCC
Q 012075 440 KDE-KSPEESTNSKEVTLPA 458 (471)
Q Consensus 440 pet-~~~~~~~~~~~~~~~~ 458 (471)
+|+ +-+||++++|.+++.|
T Consensus 10 m~keR~IQEyVPGKQVTLAH 29 (121)
T COG4810 10 MDKERIIQEYVPGKQVTLAH 29 (121)
T ss_pred chHhHHHHHhCCcceeeHHH
Confidence 444 4559999999999988
No 298
>CHL00031 psbT photosystem II protein T
Probab=20.08 E-value=1.9e+02 Score=17.71 Aligned_cols=11 Identities=18% Similarity=0.498 Sum_probs=6.0
Q ss_pred HHHhccCCCcc
Q 012075 201 LSLVILPPGRV 211 (471)
Q Consensus 201 ~~~~l~~p~~~ 211 (471)
.+.++++|.+.
T Consensus 19 FAI~FRePPri 29 (33)
T CHL00031 19 FAIFFREPPKV 29 (33)
T ss_pred HhheecCCCCC
Confidence 45566765444
Done!