BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012076
(471 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q304B9|NCASE_ARATH Neutral ceramidase OS=Arabidopsis thaliana GN=At2g38010 PE=2 SV=1
Length = 757
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/468 (76%), Positives = 403/468 (86%), Gaps = 9/468 (1%)
Query: 1 MMGYANMEQIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYG 60
MMGYAN +QIASGIHFRLRAR FIVAEPQGNRVVFVNLDACMASQIV IKV+ERLKARYG
Sbjct: 44 MMGYANSDQIASGIHFRLRARAFIVAEPQGNRVVFVNLDACMASQIVTIKVLERLKARYG 103
Query: 61 DLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRP 120
+LYTEKNVAISGIHTHAGPGGYLQYV YIVTSLGFVRQSFD +V+GIE+S++QAHE+LRP
Sbjct: 104 ELYTEKNVAISGIHTHAGPGGYLQYVTYIVTSLGFVRQSFDVVVNGIEQSIVQAHESLRP 163
Query: 121 GSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNWF 180
GS FVNKG+LLDA ++RSPS+YLNNPA+ER KYKY+VDKEMTL+KFVD Q GP GSFNWF
Sbjct: 164 GSAFVNKGDLLDAGVNRSPSSYLNNPAAERSKYKYDVDKEMTLVKFVDSQLGPTGSFNWF 223
Query: 181 ATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDFR 240
ATHGTSMSRTNSLISGDNKGAAARFMEDWFE + + + S IPRRVS I+SDF
Sbjct: 224 ATHGTSMSRTNSLISGDNKGAAARFMEDWFE-----NGQKNSVSSRNIPRRVSTIVSDFS 278
Query: 241 NNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVL 300
N LL++AA+++S G + K L V RV R K FVSAFCQSNCGDVSPN L
Sbjct: 279 RNRDRLLDIAATYKSSRGHSVDKSLDVKTRV----RNGSKRKFVSAFCQSNCGDVSPNTL 334
Query: 301 GAFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEK 360
G FCID+GLPCDFNHSTC G+NE+CYGRGPGYPDEFESTRIIGE+QF+ AV+LFNKA+EK
Sbjct: 335 GTFCIDTGLPCDFNHSTCNGQNELCYGRGPGYPDEFESTRIIGEKQFKMAVELFNKATEK 394
Query: 361 LEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMGFAFAAGTTDGPGAFDFTQGDD 420
L+GKI Y+H+YLDFS L+VT+PK GGSETVKTCPAAMGF FAAGTTDGPGAFDF QGDD
Sbjct: 395 LQGKIGYQHAYLDFSNLDVTVPKAGGGSETVKTCPAAMGFGFAAGTTDGPGAFDFKQGDD 454
Query: 421 KGNPFWRLVRDLLKKPDKEQINCQYPKPILLDTGEMKQPYDWAVSPIP 468
+GN FWRLVR++L+ P EQ+ CQ PKPILLDTGEMK+PYDWA S +P
Sbjct: 455 QGNVFWRLVRNVLRTPGPEQVQCQKPKPILLDTGEMKEPYDWAPSILP 502
>sp|Q0JL46|NCASE_ORYSJ Neutral ceramidase OS=Oryza sativa subsp. japonica GN=Os01g0624000
PE=1 SV=1
Length = 785
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/476 (73%), Positives = 401/476 (84%), Gaps = 11/476 (2%)
Query: 1 MMGYANMEQIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYG 60
MMGYAN EQIASGIHFRL++R FIVAEP G RVVFVN+DACMASQIV IKV+ERLKARYG
Sbjct: 59 MMGYANTEQIASGIHFRLKSRAFIVAEPNGKRVVFVNIDACMASQIVTIKVLERLKARYG 118
Query: 61 DLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRP 120
DLY E NVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFD +VDGIE+S+++AH NLRP
Sbjct: 119 DLYNENNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDVIVDGIEQSIVEAHNNLRP 178
Query: 121 GSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNWF 180
G IFVNKG+LLDA ++RSPSAYLNNPA ER KY+YNVDKEMTL+KFVDD+ GPVGSFNWF
Sbjct: 179 GKIFVNKGDLLDAGVNRSPSAYLNNPAEERSKYEYNVDKEMTLIKFVDDELGPVGSFNWF 238
Query: 181 ATHGTSMSRTNSLISGDNKGAAARFMEDWFEQ----SNAGHSSADELVS----EGIPRRV 232
ATHGTSMSRTNSLISGDNKGAAARFMEDW EQ + H+++D+L S +PRRV
Sbjct: 239 ATHGTSMSRTNSLISGDNKGAAARFMEDWAEQMGLPKQSAHANSDDLRSLHKTSVLPRRV 298
Query: 233 SDIISDFRNNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNC 292
S II + +L++LA+S+++ G+ S+ RR+R + KP FVSAFCQSNC
Sbjct: 299 STIIPEPNEITDDLIQLASSYEASGGRRLAGS-SITRRIRST--QQNKPKFVSAFCQSNC 355
Query: 293 GDVSPNVLGAFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYPDEFESTRIIGERQFRKAVD 352
GDVSPNVLG FCID+ LPCDFNHSTC GKNE+CYGRGPGYPDEFESTR+IG RQF KA D
Sbjct: 356 GDVSPNVLGTFCIDTNLPCDFNHSTCNGKNELCYGRGPGYPDEFESTRVIGNRQFLKARD 415
Query: 353 LFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMGFAFAAGTTDGPGA 412
LF+ ASE+++GKIDYRH+YLDFS+LEV + GG +TVKTCPAAMGFAFAAGTTDGPGA
Sbjct: 416 LFDSASEEIQGKIDYRHTYLDFSKLEVKVSTSAGGQQTVKTCPAAMGFAFAAGTTDGPGA 475
Query: 413 FDFTQGDDKGNPFWRLVRDLLKKPDKEQINCQYPKPILLDTGEMKQPYDWAVSPIP 468
FDF QGD KGNPFW+LVR+LLK P K+Q+ C PKPILLDTGEMK+PYDWA + +P
Sbjct: 476 FDFRQGDVKGNPFWKLVRNLLKTPGKDQVECHSPKPILLDTGEMKEPYDWAPAILP 531
>sp|Q9VA70|NCASE_DROME Neutral ceramidase OS=Drosophila melanogaster GN=CDase PE=1 SV=1
Length = 704
Score = 339 bits (869), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 186/483 (38%), Positives = 264/483 (54%), Gaps = 83/483 (17%)
Query: 2 MGYANMEQIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGD 61
MGYAN++Q+ GIH R+ AR F+V + +GNRV FV+ DA M +K +VI+RL+ARYG+
Sbjct: 44 MGYANIKQVGRGIHTRVFARAFVVEDEKGNRVAFVSADAGMMGYGLKREVIKRLQARYGN 103
Query: 62 LYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPG 121
+Y NVAISG HTH PGG+L +++Y ++ LGFV Q+F+ + G+ + +A +NL G
Sbjct: 104 IYHNDNVAISGTHTHGAPGGFLMHLLYDISILGFVPQTFEVMAQGLYLCIKRATDNLVDG 163
Query: 122 SIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNWFA 181
I ++K +L+ +I+RSPS+YL NPA ER +Y+++ DK +T L+FVD + +G+FNW+A
Sbjct: 164 RILLSKTTVLNVNINRSPSSYLRNPAEERAQYEHDTDKTLTQLRFVDLENNLLGAFNWYA 223
Query: 182 THGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDFRN 241
H TSM+ TN L++ D N G+++
Sbjct: 224 VHATSMNNTNRLVTSD----------------NVGYAAL--------------------- 246
Query: 242 NHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVLG 301
LLE + PGK FV AFC SN GDVSPN++G
Sbjct: 247 ----LLEKEYNPNKMPGKGK---------------------FVGAFCSSNLGDVSPNIMG 281
Query: 302 AFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEK- 360
C SG CD S C C+ GPG D FEST+I+G+R A+ L N+ S++
Sbjct: 282 PKCSISGNECDLLTSRCPTGEGDCFASGPG-KDMFESTQILGQRLADAALGLLNEQSQES 340
Query: 361 ----LEGKIDYRHSYLDFSQLEVTIPKQNGGS--------ETVKTCPAAMGFAFAAGTTD 408
+ G + + H ++D +P NG + + ++ C AMG++FAAGTTD
Sbjct: 341 TAREVTGDVRFIHQFVD-------MPNYNGSTYNPLSRKVDKIRGCQPAMGYSFAAGTTD 393
Query: 409 GPGAFDFTQGDDKGNPFWRLVRDLLKKPDKEQINCQYPKPILLDTGEMKQPYDWAVSPIP 468
GPGAF F QG NP W VRD + P +E I C PKPILL TG PY+W +
Sbjct: 394 GPGAFSFEQGTTTDNPMWNFVRDFIAAPTQEDIKCHEPKPILLATGRATFPYEWQPKIVS 453
Query: 469 DWI 471
D +
Sbjct: 454 DQL 456
>sp|Q29C43|NCASE_DROPS Neutral ceramidase OS=Drosophila pseudoobscura pseudoobscura
GN=CDase PE=3 SV=1
Length = 704
Score = 337 bits (865), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 185/483 (38%), Positives = 263/483 (54%), Gaps = 83/483 (17%)
Query: 2 MGYANMEQIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGD 61
MGYAN++Q+ GIH R+ AR F+V + +GNRV FV+ DA M +K +VI+RL+ARYG+
Sbjct: 44 MGYANIKQVGRGIHTRVFARAFVVEDEKGNRVAFVSADAGMMGYGLKREVIKRLQARYGN 103
Query: 62 LYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPG 121
LY NVAISG HTH PGG+L +++Y ++ LGFV Q+F+ + G+ + +A +NL G
Sbjct: 104 LYHTDNVAISGTHTHGAPGGFLMHLLYDISILGFVPQTFEVMAQGLYLCIKRATDNLVDG 163
Query: 122 SIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNWFA 181
IF++K +L+ +I+RSP++YL NP ER +Y+++ DK +T L+FVD + +G+FNW+A
Sbjct: 164 RIFLSKTTVLNVNINRSPTSYLRNPEEERAQYEHDTDKTLTQLRFVDLENNLLGAFNWYA 223
Query: 182 THGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDFRN 241
H TSM+ TN L++ D N G+++
Sbjct: 224 VHATSMNNTNRLVTSD----------------NVGYAAL--------------------- 246
Query: 242 NHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVLG 301
LLE + PGK FV AFC SN GDVSPN++G
Sbjct: 247 ----LLEKEYNPNKMPGKGK---------------------FVGAFCSSNLGDVSPNIMG 281
Query: 302 AFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEK- 360
C SG CD S C C+ GPG D EST+I+G+R A+ L N+ S++
Sbjct: 282 PKCSISGNECDLLTSRCPAGEGECFASGPGR-DMVESTQILGQRLADAALGLLNEQSQES 340
Query: 361 ----LEGKIDYRHSYLDFSQLEVTIPKQNGGS--------ETVKTCPAAMGFAFAAGTTD 408
+ G + + H ++D +P NG + + ++ C AMG++FAAGTTD
Sbjct: 341 TAREVTGDVRFIHQFVD-------MPNYNGSAYNPLSRKIDKIRGCQPAMGYSFAAGTTD 393
Query: 409 GPGAFDFTQGDDKGNPFWRLVRDLLKKPDKEQINCQYPKPILLDTGEMKQPYDWAVSPIP 468
GPGAF F QG NP W VRD + P +E I C PKPILL TG PY+W +
Sbjct: 394 GPGAFSFEQGTTTDNPMWNFVRDFIATPTQEDIKCHEPKPILLATGRATFPYEWQPKIVS 453
Query: 469 DWI 471
D +
Sbjct: 454 DQL 456
>sp|Q55G11|NCSEB_DICDI Neutral ceramidase B OS=Dictyostelium discoideum GN=dcd2B PE=3 SV=1
Length = 718
Score = 337 bits (863), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 194/473 (41%), Positives = 265/473 (56%), Gaps = 71/473 (15%)
Query: 1 MMGYANMEQIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYG 60
+MGYAN Q+ +GIHFR RAR F+ + GNR V+V+ D+CM Q VKI V+E L+ +G
Sbjct: 64 LMGYANPLQVGAGIHFRQRARAFVFVDSNGNRAVYVSTDSCMIFQEVKIHVVELLQDIFG 123
Query: 61 -DLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLR 119
++YTE NV +SG HTH+GP G+ QY +Y +TSLGF +++FD + +GI +++++AH++++
Sbjct: 124 PNVYTEANVLLSGTHTHSGPAGFSQYALYGITSLGFYKKNFDTICNGIVQAIVKAHKSVQ 183
Query: 120 PGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNW 179
P ++F GEL + +I+RSP AY NNP E+ Y NVDK MT+L+ D P + ++
Sbjct: 184 PANMFTETGELWNTNINRSPFAYDNNPEEEKAMYDSNVDKNMTVLRIEDMNGNPFAAISF 243
Query: 180 FATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNA-GHSSADELVSEGIPRRVSDIISD 238
FA H TSM+ TN LISGDNKG A+ W +Q N G + V
Sbjct: 244 FAVHCTSMNNTNHLISGDNKGYASYL---WEKQVNGPGTAGKGPFV-------------- 286
Query: 239 FRNNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPN 298
AA QS G V+ RG C D SP
Sbjct: 287 -----------AAFGQSNEGD-------VSPNTRG----------------PTCRDGSP- 311
Query: 299 VLGAFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYP-DEFESTRIIGERQFRKAVDLFNKA 357
C C+ + C + GPG D FEST+IIG QF KA++LFN A
Sbjct: 312 -----CDYKTSTCNGRNEEC-------WSLGPGKDGDMFESTQIIGGNQFNKALELFNNA 359
Query: 358 SEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMGFAFAAGTTDGPGAFDFTQ 417
S ++ G + YRHS++ F+ + V P N G + TC AMG++FAAGTTDGPGAF+F Q
Sbjct: 360 SIQVSGPVQYRHSWVQFTNVSVE-PPYNSGVDNATTCRGAMGYSFAAGTTDGPGAFNFVQ 418
Query: 418 GDDK--GNPFWRLVRDLLKKPDKEQINCQYPKPILLDTGEMKQPYDWAVSPIP 468
D+ GNPFW + D + KP +QI CQ PKPILLD G M +P W +P
Sbjct: 419 SDNNTSGNPFWNFIGDFIAKPTPDQIRCQSPKPILLDVG-MVEPIPWVPDVMP 470
>sp|Q9NR71|ASAH2_HUMAN Neutral ceramidase OS=Homo sapiens GN=ASAH2 PE=1 SV=2
Length = 780
Score = 327 bits (838), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/465 (39%), Positives = 258/465 (55%), Gaps = 70/465 (15%)
Query: 1 MMGYANMEQIASGIHFRLRARTFIVAEPQG-NRVVFVNLDACMASQIVKIKVIERLKARY 59
+MGY Q A GI RL +R FI+AEP G NR VFV++D M SQ ++++V+ RL+++Y
Sbjct: 120 LMGYGKSGQNAQGILTRLYSRAFIMAEPDGSNRTVFVSIDIGMVSQRLRLEVLNRLQSKY 179
Query: 60 GDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLR 119
G LY NV +SG HTH+GP GY QY V+++ S GF Q+F +V GI KS+ AH N++
Sbjct: 180 GSLYRRDNVILSGTHTHSGPAGYFQYTVFVIASEGFSNQTFQHMVTGILKSIDIAHTNMK 239
Query: 120 PGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNW 179
PG IF+NKG + I+RSP +YL NP SER +Y N DKEM +LK VD
Sbjct: 240 PGKIFINKGNVDGVQINRSPYSYLQNPQSERARYSSNTDKEMIVLKMVD----------- 288
Query: 180 FATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDF 239
++GD+ G + WF ++++ LV+ SD
Sbjct: 289 --------------LNGDDLG-----LISWFAIHPVSMNNSNHLVN-----------SDN 318
Query: 240 RNNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNV 299
LLE + PG+ FV+AF SN GDVSPN+
Sbjct: 319 VGYASYLLEQEKNKGYLPGQGP---------------------FVAAFASSNLGDVSPNI 357
Query: 300 LGAFCIDSGLPCDFNHSTCG-GKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKAS 358
LG CI++G CD +STC G MC +GPG D F+ST+IIG +++A +L+ AS
Sbjct: 358 LGPRCINTGESCDNANSTCPIGGPSMCIAKGPGQ-DMFDSTQIIGRAMYQRAKELYASAS 416
Query: 359 EKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMGFAFAAGTTDGPGAFDFTQG 418
+++ G + H ++D + + V + + KTC A+G++FAAGT DG G +FTQG
Sbjct: 417 QEVTGPLASAHQWVDMTDVTVWL----NSTHASKTCKPALGYSFAAGTIDGVGGLNFTQG 472
Query: 419 DDKGNPFWRLVRD-LLKKPDKEQINCQYPKPILLDTGEMKQPYDW 462
+G+PFW +RD +L KP +E C PKPILL TGE+ +P+ W
Sbjct: 473 KTEGDPFWDTIRDQILGKPSEEIKECHKPKPILLHTGELSKPHPW 517
>sp|Q5W7F1|ASAH2_DANRE Neutral ceramidase OS=Danio rerio GN=asah2 PE=1 SV=1
Length = 743
Score = 324 bits (830), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 186/466 (39%), Positives = 257/466 (55%), Gaps = 73/466 (15%)
Query: 1 MMGYANMEQIASGIHFRLRARTFIVAEPQGN-RVVFVNLDACMASQIVKIKVIERLKARY 59
MMGYAN +Q A G+H RL +R FIV + GN RVVFV D M SQ ++++V + LK +Y
Sbjct: 79 MMGYANTDQTARGLHTRLFSRAFIVDD--GNKRVVFVTSDIGMVSQRLRLEVFQALKEKY 136
Query: 60 GDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLR 119
GDLY + NV +SG HTH+G GGY QY ++++TS G+++ S A+V GI KS+ AH NLR
Sbjct: 137 GDLYRQDNVVLSGTHTHSGVGGYFQYTLFMITSKGYIKPSIQAIVSGIVKSIDIAHRNLR 196
Query: 120 PGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNW 179
PG IF+NKG++ D++ +RSP +Y+NNP ER +Y++N DK++ +LKF D
Sbjct: 197 PGRIFINKGQVADSNFNRSPHSYMNNPEEERNRYEFNTDKQIVVLKFTD----------- 245
Query: 180 FATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDF 239
+ GD G + WF + + +VS SD
Sbjct: 246 --------------LDGDGIG-----LLSWFAVHPVSMNYTNRMVS-----------SDN 275
Query: 240 RNNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNV 299
+ E + PG EK FV+ F SN GD SPN+
Sbjct: 276 LGYASYIFEQEKNIGFLPG--------------------EKGPFVAGFSSSNLGDSSPNI 315
Query: 300 LGAFCIDSGLPCDFNHSTC--GGKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKA 357
G C+++GL CD+ +S+C GGK + C GPG D FESTRIIGE F+ A +L+ A
Sbjct: 316 RGPVCVNTGLKCDYINSSCPVGGK-KACIAFGPG-EDMFESTRIIGENMFKIAKELYGSA 373
Query: 358 SEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMGFAFAAGTTDGPGAFDFTQ 417
++L G + H +++ + V Q + T +TC A+G +FAAGTTDG G F+F Q
Sbjct: 374 KQELHGPVYGAHQWVNMTDETV----QFNSTHTGRTCKPALGHSFAAGTTDGGGEFNFLQ 429
Query: 418 GDDKGNPFWRLVRD-LLKKPDKEQINCQYPKPILLDTGEMKQPYDW 462
GD +G+PFW +RD +L P E C PKPIL TGEM P W
Sbjct: 430 GDTEGDPFWDGIRDAVLGPPSNETKACHQPKPILFSTGEMDSPLPW 475
>sp|Q91XT9|ASAH2_RAT Neutral ceramidase OS=Rattus norvegicus GN=Asah2 PE=1 SV=1
Length = 761
Score = 319 bits (817), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 178/465 (38%), Positives = 257/465 (55%), Gaps = 70/465 (15%)
Query: 1 MMGYANMEQIASGIHFRLRARTFIVAEPQG-NRVVFVNLDACMASQIVKIKVIERLKARY 59
+MGY Q A G+ RL +R FI+A+P G NR+ FV+++ CM SQ ++++V++RL+++Y
Sbjct: 101 LMGYGKNGQNAQGLLTRLFSRAFILADPDGSNRMAFVSVELCMISQRLRLEVLKRLQSKY 160
Query: 60 GDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLR 119
G LY NV +S HTH+GP G+ QY +YI+ S GF ++F +V GI KS+ AH NL+
Sbjct: 161 GSLYRRDNVILSATHTHSGPAGFFQYTLYILASEGFSNRTFQYIVSGIVKSIDIAHTNLK 220
Query: 120 PGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNW 179
PG + +NKG + + I+RSPS+YL NP SER +Y + DKEM +LK VD
Sbjct: 221 PGKVLINKGNVANVQINRSPSSYLQNPPSERARYSSDTDKEMVVLKLVD----------- 269
Query: 180 FATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDF 239
++G++ G + WF ++++ LV+ SD
Sbjct: 270 --------------LNGEDLG-----LISWFAVHPVSMNNSNHLVN-----------SDN 299
Query: 240 RNNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNV 299
L E + PG+ FV+ F SN GDVSPN+
Sbjct: 300 MGYAAYLFEQEKNRGYLPGQGP---------------------FVAGFASSNLGDVSPNI 338
Query: 300 LGAFCIDSGLPCDFNHSTC-GGKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKAS 358
LG C+++G CD + STC G MC GPG D FEST IIG ++KA +L AS
Sbjct: 339 LGPHCVNTGESCDNDKSTCPSGGPSMCMASGPG-QDMFESTHIIGRVIYQKAKELHASAS 397
Query: 359 EKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMGFAFAAGTTDGPGAFDFTQG 418
+++ G + H +++ + + V Q + TVKTC AA+G++FAAGT DG + TQG
Sbjct: 398 QEVTGPVLTAHQWVNMTDVSV----QLNATHTVKTCKAALGYSFAAGTIDGVSGLNITQG 453
Query: 419 DDKGNPFWRLVRD-LLKKPDKEQINCQYPKPILLDTGEMKQPYDW 462
+GN FW +RD LL KP +E I CQ PKPIL+ TGE+ +P+ W
Sbjct: 454 TTEGNLFWDTLRDQLLGKPSEEIIECQKPKPILIHTGELTKPHPW 498
>sp|P0C7U2|ASA2C_HUMAN Putative neutral ceramidase C OS=Homo sapiens GN=ASAH2C PE=2 SV=1
Length = 622
Score = 281 bits (719), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 158/414 (38%), Positives = 224/414 (54%), Gaps = 69/414 (16%)
Query: 51 VIERLKARYGDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKS 110
V+ RL+++YG LY NV +SG HTH+GP GY QY V+++ S GF Q+F +V GI KS
Sbjct: 13 VLNRLQSKYGSLYRRDNVILSGTHTHSGPAGYFQYTVFVIASEGFSNQTFQHMVTGILKS 72
Query: 111 VLQAHENLRPGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQ 170
+ AH N++PG IF+NKG + I+RSP +YL NP SER +Y N DKEM +LK VD
Sbjct: 73 IDIAHTNMKPGKIFINKGNVDGVQINRSPYSYLQNPQSERARYSSNTDKEMIVLKMVD-- 130
Query: 171 WGPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPR 230
++GD+ G + WF ++++ LV+
Sbjct: 131 -----------------------LNGDDLG-----LISWFAIHPVSMNNSNHLVN----- 157
Query: 231 RVSDIISDFRNNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQS 290
SD LLE + PG+ FV+AF S
Sbjct: 158 ------SDNVGYASYLLEQEKNKGYLPGQGP---------------------FVAAFSSS 190
Query: 291 NCGDVSPNVLGAFCIDSGLPCDFNHSTCG-GKNEMCYGRGPGYPDEFESTRIIGERQFRK 349
N GDVSPN+LG CI++G CD +STC G MC +GPG D F+ST+IIG +++
Sbjct: 191 NLGDVSPNILGPRCINTGESCDNANSTCPIGGPSMCIAKGPGQ-DMFDSTQIIGRAMYQR 249
Query: 350 AVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMGFAFAAGTTDG 409
A +L+ AS+++ G + H ++D + + V + + KTC A+G++FAAGT DG
Sbjct: 250 AKELYASASQEVTGPLASAHQWVDMTDVTVWL----NSTHASKTCKPALGYSFAAGTIDG 305
Query: 410 PGAFDFTQGDDKGNPFWRLVRD-LLKKPDKEQINCQYPKPILLDTGEMKQPYDW 462
G +FTQG +G+PFW +RD +L KP +E C PKPILL TGE+ +P+ W
Sbjct: 306 VGGLNFTQGKTEGDPFWDTIRDQILGKPSEEIKECHKPKPILLHTGELSKPHPW 359
>sp|Q54BK2|NCSEA_DICDI Neutral ceramidase A OS=Dictyostelium discoideum GN=dcd2A PE=1 SV=1
Length = 714
Score = 209 bits (532), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 143/208 (68%), Gaps = 1/208 (0%)
Query: 1 MMGYANMEQIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYG 60
MMGYA QI GIHFR RAR F+ + +GNR V+V+ D+CM Q VKI+VI+ L+ +G
Sbjct: 58 MMGYAMPGQITGGIHFRQRARAFVFIDSEGNRAVYVSTDSCMIFQEVKIQVIQDLQEIFG 117
Query: 61 -DLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLR 119
LYT NV +SG HTH+GP G+ +Y +Y +T+LGF +++FD + DGI +++++AH++++
Sbjct: 118 PTLYTHDNVLLSGTHTHSGPAGFSEYALYGITALGFYKKNFDTICDGIVQAIVKAHKSVQ 177
Query: 120 PGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNW 179
P + +GEL +++I+RSP AY NNP E+ Y NVDK MT+++ D P + ++
Sbjct: 178 PARMLTQQGELWNSNINRSPYAYDNNPEEEKAMYDANVDKNMTVIRIEDMSGNPFAAISF 237
Query: 180 FATHGTSMSRTNSLISGDNKGAAARFME 207
F H TSM+ TN LISGDNKG A+ E
Sbjct: 238 FGVHCTSMNNTNHLISGDNKGYASYLWE 265
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 126/197 (63%), Gaps = 8/197 (4%)
Query: 277 EAEKPG---FVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYP 333
++ PG F++AF QSN GDVSPN G C D G PCD+ STC GK E C+ GPG
Sbjct: 271 QSSLPGTGPFIAAFGQSNEGDVSPNTRGPTCRD-GKPCDYKTSTCNGKVEECWALGPGTD 329
Query: 334 -DEFESTRIIGERQFRKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVK 392
D FEST+IIG QF KA++LFN A+ ++ GKI YRH++ F+ + V P N G E
Sbjct: 330 GDMFESTQIIGGNQFNKALELFNNATIQVSGKIQYRHTWKPFTNVSVEAPY-NSGVEGAT 388
Query: 393 TCPAAMGFAFAAGTTDGPGAFDFTQGDDK-GNPFWRLVRDLLKKPDKEQINCQYPKPILL 451
TC AMG++FA GTTDGPGAF+F QGD+ NPFW + ++ KP +Q CQ PKPIL+
Sbjct: 389 TCRGAMGYSFAGGTTDGPGAFNFIQGDNSTTNPFWNFIGGIIAKPTPQQTACQAPKPILI 448
Query: 452 DTGEMKQPYDWAVSPIP 468
D G M +P W +P
Sbjct: 449 DVG-MVEPIPWVPDVMP 464
>sp|Q9JHE3|ASAH2_MOUSE Neutral ceramidase OS=Mus musculus GN=Asah2 PE=1 SV=1
Length = 756
Score = 209 bits (532), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 145/218 (66%), Gaps = 4/218 (1%)
Query: 1 MMGYANMEQIASGIHFRLRARTFIVAEPQG-NRVVFVNLDACMASQIVKIKVIERLKARY 59
+MGY Q A G+ RL +R FI+A+P G NR+ FV+++ CM SQ ++++V++RL+++Y
Sbjct: 96 LMGYGKNGQNARGLLTRLFSRAFILADPDGSNRMAFVSVELCMISQRLRLEVLKRLESKY 155
Query: 60 GDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLR 119
G LY NV +S IHTH+GP G+ QY +YI+ S GF ++F +V GI KS+ AH NL+
Sbjct: 156 GSLYRRDNVILSAIHTHSGPAGFFQYTLYILASEGFSNRTFQYIVSGIMKSIDIAHTNLK 215
Query: 120 PGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNW 179
PG IF+NKG + + I+RSPS+YL NP SER +Y N DKEM +LK VD +G +W
Sbjct: 216 PGKIFINKGNVANVQINRSPSSYLLNPQSERARYSSNTDKEMLVLKLVDLNGEDLGLISW 275
Query: 180 FATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGH 217
FA H SM+ +N ++ DN G AA E ++ N G+
Sbjct: 276 FAIHPVSMNNSNHFVNSDNMGYAAYLFE---QEKNKGY 310
Score = 168 bits (426), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 115/182 (63%), Gaps = 7/182 (3%)
Query: 283 FVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNHSTC-GGKNEMCYGRGPGYPDEFESTRI 341
FV+ F SN GDVSPN+LG C+++G CD + STC G MC GPG D FEST I
Sbjct: 317 FVAGFASSNLGDVSPNILGPHCVNTGESCDNDKSTCPNGGPSMCMASGPG-QDMFESTHI 375
Query: 342 IGERQFRKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMGFA 401
IG ++KA +L+ AS+++ G + H +++ + + V Q + TVKTC A+G++
Sbjct: 376 IGRIIYQKAKELYASASQEVTGPVLAAHQWVNMTDVSV----QLNATHTVKTCKPALGYS 431
Query: 402 FAAGTTDGPGAFDFTQGDDKGNPFWRLVRD-LLKKPDKEQINCQYPKPILLDTGEMKQPY 460
FAAGT DG + TQG +G+PFW +RD LL KP +E + CQ PKPILL +GE+ P+
Sbjct: 432 FAAGTIDGVSGLNITQGTTEGDPFWDTLRDQLLGKPSEEIVECQKPKPILLHSGELTIPH 491
Query: 461 DW 462
W
Sbjct: 492 PW 493
>sp|Q9I596|NCASE_PSEAE Neutral ceramidase OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=PA0845 PE=1 SV=1
Length = 670
Score = 182 bits (462), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 143/232 (61%), Gaps = 13/232 (5%)
Query: 1 MMGYANMEQIASGIHFRLRARTFIVAEP-QGNRVVFVNLDACMASQIVKIKVIERLKARY 59
MMGY+++EQ +GIH R AR F++ E G R+V+VN D M Q V +KV+ RLKA+Y
Sbjct: 47 MMGYSSLEQKTAGIHMRQWARAFVIEEAASGRRLVYVNTDLGMIFQAVHLKVLARLKAKY 106
Query: 60 GDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLR 119
+Y E NV ++ HTH+GPGG+ Y +Y ++ LGF ++F+A+VDGI +S+ +A L+
Sbjct: 107 PGVYDENNVMLAATHTHSGPGGFSHYAMYNLSVLGFQEKTFNAIVDGIVRSIERAQARLQ 166
Query: 120 PGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNW 179
PG +F GEL +A+ +RS ++L NP + Y+ +D +M++L FVD G+ +W
Sbjct: 167 PGRLFYGSGELRNANRNRSLLSHLKNP--DIVGYEDGIDPQMSVLSFVDANGELAGAISW 224
Query: 180 FATHGTSMSRTNSLISGDNKGAAARFMED----------WFEQSNAGHSSAD 221
F H TSM+ N LIS DNKG A+ E F Q+NAG+ S +
Sbjct: 225 FPVHSTSMTNANHLISPDNKGYASYHWEHDVSRKSGFVAAFAQTNAGNLSPN 276
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 105/193 (54%), Gaps = 32/193 (16%)
Query: 278 AEKPGFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYPDEFE 337
+ K GFV+AF Q+N G++SPN+ + G GP + +EF+
Sbjct: 256 SRKSGFVAAFAQTNAGNLSPNL-----------------------NLKPGSGP-FDNEFD 291
Query: 338 STRIIGERQFRKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAA 397
+TR IG RQF KA ++ +A E++ G++D R ++DF++L + +G + + C AA
Sbjct: 292 NTREIGLRQFAKAYEIAGQAQEEVLGELDSRFRFVDFTRLPIRPEFTDG--QPRQLCTAA 349
Query: 398 MGFAFAAGTT-DGPGAFDFTQGDDKGNPFWRLVRDLLKK-PDKEQINCQYPKPILLDTGE 455
+G + AAG+T DGPG +G+ NPF + LL P +E + CQ K IL DTG
Sbjct: 350 IGTSLAAGSTEDGPGPLGLEEGN---NPFLSALGGLLTGVPPQELVQCQAEKTILADTGN 406
Query: 456 MKQPYDWAVSPIP 468
K+PY W + +P
Sbjct: 407 -KKPYPWTPTVLP 418
>sp|O06769|NCASE_MYCTU Neutral ceramidase OS=Mycobacterium tuberculosis GN=Rv0669c PE=1
SV=1
Length = 637
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 140/454 (30%), Positives = 210/454 (46%), Gaps = 93/454 (20%)
Query: 1 MMGYANMEQIASGIHFRLRARTFIVAEPQGN---RVVFVNLDACMASQIVKIKVIERLKA 57
M+GY +Q +GIH RLR+R F+ + + R++ + + + Q V +V+ RL
Sbjct: 20 MLGYGKSDQRTAGIHQRLRSRAFVFRDDSQDGDARLLLIVAELPLPMQNVNEEVLRRLAD 79
Query: 58 RYGDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHEN 117
YGD Y+E+N I+ HTHAGPGGY Y++Y +T+ GF +F A+VDGI +SV AH +
Sbjct: 80 LYGDTYSEQNTLITATHTHAGPGGYCGYLLYNLTTSGFRPATFAAIVDGIVESVEHAHAD 139
Query: 118 LRPGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSF 177
+ P + ++ GEL ASI+RSPSA+ NP +++ + VD TL++ +D VG
Sbjct: 140 VAPAEVSLSHGELYGASINRSPSAFDRNPPADKAFFPKRVDPHTTLVR-IDRGEATVGVI 198
Query: 178 NWFATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIIS 237
++FATHGTSM+ N LISGDNKG AA +E++ G AD L +
Sbjct: 199 HFFATHGTSMTNRNHLISGDNKGFAAYH----WERTVGG---ADYLAGQ----------P 241
Query: 238 DFRNNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSP 297
DF +AA Q+ PG D+SP
Sbjct: 242 DF---------IAAFAQTNPG-----------------------------------DMSP 257
Query: 298 NVLGAFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKA 357
NV G ++ +F+++ + +C QF A + A
Sbjct: 258 NVDGPLSPEAPPDREFDNTR---RTGLC--------------------QFEDAFTQLSGA 294
Query: 358 SEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMGFAFAAGTTDGPGAFDFTQ 417
+ + ID R +Y+D + V G E +T G AGT +GPG F Q
Sbjct: 295 T-PIGAGIDARFTYVDLGSVLVRGEYTPDGEER-RTGRPMFGAGAMAGTDEGPGFHGFRQ 352
Query: 418 GDDKGNPFWRLVRDLLKKPDKEQINCQYPKPILL 451
G NPFW + + + + Q PK I++
Sbjct: 353 GR---NPFWDRLSRAMYRLARPTAAAQAPKGIVM 383
>sp|P21696|GPD1_SCHPO Glycerol-3-phosphate dehydrogenase [NAD(+)] 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=gpd1 PE=1 SV=2
Length = 385
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 18/135 (13%)
Query: 172 GPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRR 231
G VGS NW GT++++ I G+N AR F +E+ +G R+
Sbjct: 26 GVVGSGNW----GTAIAK----ICGEN----ARAHGHHFRSKVRMWVFEEEIEYKGEKRK 73
Query: 232 VSDIISDFRNNHHELLELAASFQSPPGKAAT-KILSVARRVRGILREAEKPGFVSAFCQS 290
++++ N HE ++ + PP A + VARR IL F+ C
Sbjct: 74 LTEVF----NEAHENVKYLPGIECPPNVIAVPDVREVARRAD-ILVFVVPHQFIERVCDQ 128
Query: 291 NCGDVSPNVLGAFCI 305
G + P +G CI
Sbjct: 129 MVGLIRPGAVGISCI 143
>sp|Q6GQ76|MTR1_XENLA Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Xenopus
laevis GN=ftsjd2 PE=2 SV=1
Length = 846
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 89 IVTSLGFVRQSFDALVDGIEKSVLQAHEN---LRPGSIFVNKGELLDASISRSPSAYLNN 145
++TSL + +FD L +G E + N + G F+N+ + A+I N
Sbjct: 195 LLTSLLQCKSAFDEL-EGEEMRRARTRSNPYEMIRGVFFLNRAAMKMANIDHVFDYMFTN 253
Query: 146 PASERGKYKYNVDKEMTLLKFVDDQWGPVG 175
P +GK K DKE LL F D GP G
Sbjct: 254 PKDSQGKPKLK-DKESELLYFADVCAGPGG 282
>sp|Q38XK7|SYY_LACSS Tyrosine--tRNA ligase OS=Lactobacillus sakei subsp. sakei (strain
23K) GN=tyrS PE=3 SV=1
Length = 419
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 101 DALVD-GIEKSVLQAHENLRPGSIFVNKGELLDASISRSPSAYLNNP--ASERGKYKY 155
D LVD GIE S QA E+++ G+I +N L + ++ PS RGK KY
Sbjct: 356 DFLVDAGIESSKRQAREDVQNGAITINGDRLRETTLEIDPSENFEGKFVIVRRGKKKY 413
>sp|Q9SUU7|PP346_ARATH Pentatricopeptide repeat-containing protein At4g32450,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H63 PE=2
SV=1
Length = 537
Score = 32.0 bits (71), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 11/69 (15%)
Query: 178 NWFATHGTSMSRT--NSLISGDNKGAAARFMEDWFEQSNAGHSSADELVS---EGIPRRV 232
NW ++ G S T N + +N G + F+Q ++GHSS DEL S EG ++
Sbjct: 112 NWQSSDGCSSYGTTGNGVPQENNTGG------NHFQQDHSGHSSLDELDSICREGKVKKA 165
Query: 233 SDIISDFRN 241
+II +RN
Sbjct: 166 VEIIKSWRN 174
>sp|P0A4T3|OCCR_RHIRD Octopine catabolism/uptake operon regulatory protein OccR
OS=Rhizobium radiobacter GN=occR PE=4 SV=1
Length = 298
Score = 32.0 bits (71), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 2 MGYANMEQIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGD 61
+GYA+ Q G R+ +VA P G+R+ LD + ++I K G
Sbjct: 143 IGYADGPQERQGFLIETRSLPAVVAVPMGHRLA--GLDRVTPQDLAGERII---KQETGT 197
Query: 62 LYTEK-NVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSV-LQAHENLR 119
L+ + VAI GI L + T+L VR+ + ++ LR
Sbjct: 198 LFAMRVEVAIGGIQRRPSIEVSLSH-----TALSLVREGAGIAIIDPAAAIEFTDRIVLR 252
Query: 120 PGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLK 165
P SIF++ G L S +PS ++ +E ++ ++ K+ L++
Sbjct: 253 PFSIFIDAGFLEVRSAIGAPSTIVDRFTTEFWRFHDDLMKQNGLME 298
>sp|P0A4T4|OCCR_AGRT4 Octopine catabolism/uptake operon regulatory protein OccR
OS=Agrobacterium tumefaciens (strain Ach5) GN=occR PE=4
SV=1
Length = 298
Score = 32.0 bits (71), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 2 MGYANMEQIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGD 61
+GYA+ Q G R+ +VA P G+R+ LD + ++I K G
Sbjct: 143 IGYADGPQERQGFLIETRSLPAVVAVPMGHRLA--GLDRVTPQDLAGERII---KQETGT 197
Query: 62 LYTEK-NVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSV-LQAHENLR 119
L+ + VAI GI L + T+L VR+ + ++ LR
Sbjct: 198 LFAMRVEVAIGGIQRRPSIEVSLSH-----TALSLVREGAGIAIIDPAAAIEFTDRIVLR 252
Query: 120 PGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLK 165
P SIF++ G L S +PS ++ +E ++ ++ K+ L++
Sbjct: 253 PFSIFIDAGFLEVRSAIGAPSTIVDRFTTEFWRFHDDLMKQNGLME 298
>sp|Q9V1A9|RNH2_PYRAB Ribonuclease HII OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=rnhB
PE=3 SV=1
Length = 224
Score = 32.0 bits (71), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 8 EQIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDL 62
E+ A I RL +VAE + + + A + +++++ + IE+LKA YGD
Sbjct: 112 ERFAENIRSRLAYEAKVVAEHKADAKYEIVSAASILAKVIRDREIEKLKAEYGDF 166
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 187,820,909
Number of Sequences: 539616
Number of extensions: 8397046
Number of successful extensions: 18581
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 18505
Number of HSP's gapped (non-prelim): 40
length of query: 471
length of database: 191,569,459
effective HSP length: 121
effective length of query: 350
effective length of database: 126,275,923
effective search space: 44196573050
effective search space used: 44196573050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)