Query 012077
Match_columns 471
No_of_seqs 242 out of 431
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 21:10:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012077.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012077hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p6w_A VP54, putative glycosyl 100.0 3.8E-41 1.3E-45 316.2 10.8 135 149-292 4-150 (213)
2 1ll2_A Glycogenin-1; protein-s 96.3 0.0037 1.3E-07 62.7 5.6 82 216-329 89-172 (333)
3 1g9r_A Glycosyl transferase; a 96.2 0.0052 1.8E-07 60.3 6.1 86 220-329 94-197 (311)
4 3u2u_A Glycogenin-1, GN-1, GN1 95.1 0.042 1.4E-06 53.6 7.5 91 203-329 82-173 (263)
5 3tzt_A Glycosyl transferase fa 94.8 0.35 1.2E-05 46.8 13.1 124 182-329 55-202 (276)
6 2fy7_A Beta-1,4-galactosyltran 53.6 77 0.0026 30.6 10.3 77 150-238 64-146 (287)
7 2c0n_A A197; thermophil protei 44.3 22 0.00074 33.8 4.5 52 179-235 16-67 (203)
8 3hd7_A Vesicle-associated memb 20.1 39 0.0013 27.7 1.6 26 10-35 55-82 (91)
9 2lju_A Putative oxidoreductase 18.6 79 0.0027 27.1 3.2 18 178-195 70-87 (108)
10 2jya_A AGR_C_3324P, uncharacte 16.1 65 0.0022 27.6 2.0 16 179-194 63-78 (106)
No 1
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=100.00 E-value=3.8e-41 Score=316.16 Aligned_cols=135 Identities=24% Similarity=0.488 Sum_probs=122.3
Q ss_pred CCCcEEEEEeeCCCCCCCCcchHHHHHHHHHHHHHHHHhCCcEEEecccc-Cc-ccccccchHHHHHHHHhcCCCccEEE
Q 012077 149 KKPRVLLVTGSSPKACENPVGDHYLLKSIKNKIDYCRVHGLEIFYSTALL-DA-EMAGFWAKLPLIRNLLLGHPEVEFLW 226 (471)
Q Consensus 149 g~prIvIVT~sd~~~c~~~~gd~yL~ksikNk~~YAr~HGY~~~~~~~~l-d~-~~~~~WaKip~IR~aL~a~PeaEWIw 226 (471)
.+|||+||||++|++| +|++++++||++||++|||+++|+...+ +. ++.+.|.|..+||++|.+||++||||
T Consensus 4 ~~p~IllvtGs~p~ew------~yl~ksiKNK~DYArrHGYelfy~d~~l~k~~e~a~eW~ksW~IR~AM~khPeAEWfW 77 (213)
T 2p6w_A 4 TTPCITILSGHFPKET------IYARKTKELVEEYCSIHGYNFYYEESEPLETEEHALHFRRSWIIQQAAEKFPSTEWFL 77 (213)
T ss_dssp --CCEEEEEECSCTTC------HHHHHHHHHHHHHHHHHTCEEEEECSCCSCCSHHHHHHTHHHHHHHHHHHCTTCSEEE
T ss_pred CCceEEEEeCCCCCCc------HHHHHHHHHHHHHHHHcCCeEEEeecccccchhhcccchhhHHHHHHHHHCCCceEEE
Confidence 4799999999999987 8999999999999999999999974433 33 36778999999999999999999999
Q ss_pred EeeCCceeecCCCCCCcccc---CCCCeeecCccceeeeCCCCcccccccee-------EeccHHHHHHHHHhccc
Q 012077 227 WMDSDAMFTDMTFEVPWERY---KDYNLVMHGWNEMVYDQKNWIGLNTGSFL-------LRNCQWSLDILDAWAPM 292 (471)
Q Consensus 227 WLDsDAlImNp~~sLpLe~~---~d~nLvI~g~~dlI~tqddw~GLNtGsFL-------IRNs~WS~~fLDaWa~m 292 (471)
|||+||+||||++++|++++ +++|+++|||.++++++ .|||||||| |||||||++|||+|++|
T Consensus 78 WLDsDAlIMDmnf~lPLe~yldl~~~NlvvHGw~e~~~~~---~~lNtGvfL~~~~~~~irncqWSld~~~~w~~~ 150 (213)
T 2p6w_A 78 WLDSDVYVNPKNKNKPITSFIDLSDPNILYHTFHEAPWGS---YPINTGVKFVHKDALEIEKIVWSLRNEAPWNTF 150 (213)
T ss_dssp EECTTEEECGGGTTSCGGGTCCCCCTTCCEEEECCTTTSS---SSCCTTEEEEEGGGHHHHHHHHHTTTSTTTTST
T ss_pred EecCCceeecCCCCCcHHHccccccCceeecccccccccc---ccccceeeeecccchhhhhceeehhhhhcccCC
Confidence 99999999999999999999 99999999998887764 499999999 99999999999999986
No 2
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=96.31 E-value=0.0037 Score=62.65 Aligned_cols=82 Identities=15% Similarity=0.197 Sum_probs=47.9
Q ss_pred HhcCCCccEEEEeeCCceeecCCCCCCccccCCCCeeecCccceeeeCCCC-ccccccceeEeccHHH-HHHHHHhcccC
Q 012077 216 LLGHPEVEFLWWMDSDAMFTDMTFEVPWERYKDYNLVMHGWNEMVYDQKNW-IGLNTGSFLLRNCQWS-LDILDAWAPMG 293 (471)
Q Consensus 216 L~a~PeaEWIwWLDsDAlImNp~~sLpLe~~~d~nLvI~g~~dlI~tqddw-~GLNtGsFLIRNs~WS-~~fLDaWa~m~ 293 (471)
+-..+++|.|+|||+|++|...=-+| -... .+. .-+|. .| ..+|+|+|+|+.+.-. ..+++....
T Consensus 89 i~~l~~ydrvlYLDaD~lv~~di~eL--f~~~--~~a--Av~d~-----~~~~~fNsGvmlin~~~~~~~~l~~~~~~-- 155 (333)
T 1ll2_A 89 CWSLTQYSKCVFMDADTLVLANIDDL--FERE--ELS--AAPDP-----GWPDCFNSGVFVYQPSVETYNQLLHVASE-- 155 (333)
T ss_dssp GGGCTTCSEEEEECTTEEECSCCGGG--GGSC--SSE--EEECS-----SSTTSEEEEEEEECCCHHHHHHHHHHHHH--
T ss_pred HhHhcCCCeEEEEeCCEEeccCHHHH--hCCC--cee--EEecC-----CCCcceeeeEEEEeCCHHHHHHHHHHHHh--
Confidence 33347899999999999999852211 1111 111 00110 12 4799999999876322 122222211
Q ss_pred CCCccccchhhhhhhhhcCCCCCCCCchhHHHHHHh
Q 012077 294 PKGKVRDDAGKKLTKELKDRPAFEADDQSAMVYSLA 329 (471)
Q Consensus 294 P~~pv~~~~g~~L~~~l~~~~~f~~~DQsAL~yLL~ 329 (471)
...+...||+.|..++.
T Consensus 156 -------------------~~~~~~~DQ~~LN~~f~ 172 (333)
T 1ll2_A 156 -------------------QGSFDGGDQGLLNTFFN 172 (333)
T ss_dssp -------------------TCCTTSSHHHHHHHHTT
T ss_pred -------------------cCCCCCCCHHHHHHHHH
Confidence 12345689999999886
No 3
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=96.23 E-value=0.0052 Score=60.32 Aligned_cols=86 Identities=14% Similarity=0.131 Sum_probs=48.6
Q ss_pred CCccEEEEeeCCceeecCCCC---CCccccCCCCee-ecC--------cc-ceeeeCCCCccccccceeEeccHHH----
Q 012077 220 PEVEFLWWMDSDAMFTDMTFE---VPWERYKDYNLV-MHG--------WN-EMVYDQKNWIGLNTGSFLLRNCQWS---- 282 (471)
Q Consensus 220 PeaEWIwWLDsDAlImNp~~s---LpLe~~~d~nLv-I~g--------~~-dlI~tqddw~GLNtGsFLIRNs~WS---- 282 (471)
|+++.|.+||+|++|...=-+ +++ .+..+. ... +. .+-+... -.++|+|+++|..+.|-
T Consensus 94 ~~~~kvlyLD~D~iv~~di~eL~~~~l---~~~~~aav~d~~~~~~~~~~~~~~~~~~-~~yfNsGv~linl~~~r~~~~ 169 (311)
T 1g9r_A 94 ADCDKVLYLDIDVLVRDSLTPLWDTDL---GDNWLGASIDLFVERQEGYKQKIGMADG-EYYFNAGVLLINLKKWRRHDI 169 (311)
T ss_dssp CSCSCEEEECSSEEECSCCHHHHTCCC---TTCSEEEEECHHHHTSTTHHHHTTCCTT-SCCEEEEEEEECHHHHTTSCH
T ss_pred hhcCEEEEEcCCeEeccCHHHHhccCC---CCcEEEEEeccchhhhHHHHHhcCCCCC-CceEeeeeeeeeHHHHHhcch
Confidence 789999999999999875211 111 111111 100 00 0001112 24899999999988773
Q ss_pred -HHHHHHhcccCCCCccccchhhhhhhhhcCCCCCCCCchhHHHHHHh
Q 012077 283 -LDILDAWAPMGPKGKVRDDAGKKLTKELKDRPAFEADDQSAMVYSLA 329 (471)
Q Consensus 283 -~~fLDaWa~m~P~~pv~~~~g~~L~~~l~~~~~f~~~DQsAL~yLL~ 329 (471)
..+++.... . . ..+...||++|..++.
T Consensus 170 ~~~~~~~~~~-----------------~-~--~~~~~~DQd~lN~~f~ 197 (311)
T 1g9r_A 170 FKMSSEWVEQ-----------------Y-K--DVMQYQDQDILNGLFK 197 (311)
T ss_dssp HHHHHHHHHH-----------------H-T--TTCSSHHHHHHHHHHT
T ss_pred HHHHHHHHHh-----------------c-c--CcCccCCcCHHHHHHc
Confidence 333332211 0 1 1345689999998775
No 4
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=95.12 E-value=0.042 Score=53.63 Aligned_cols=91 Identities=15% Similarity=0.200 Sum_probs=53.5
Q ss_pred ccccchHHHHHHHHhcCCCccEEEEeeCCceeecCCCCCCccccCCCCeeecCccceeeeCCCC-ccccccceeEeccHH
Q 012077 203 AGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTFEVPWERYKDYNLVMHGWNEMVYDQKNW-IGLNTGSFLLRNCQW 281 (471)
Q Consensus 203 ~~~WaKip~IR~aL~a~PeaEWIwWLDsDAlImNp~~sLpLe~~~d~nLvI~g~~dlI~tqddw-~GLNtGsFLIRNs~W 281 (471)
...|.|+.+.+ + .++|=|.|||+|+++...--+| -... .+.- -+| ..| ..+|+|+|+|..+..
T Consensus 82 ~~~~~kl~~~~--l---~~~~~vlylD~D~~v~~~~~~L--f~~~--~~aA--~~d-----~~~~~~fNsGv~li~p~~~ 145 (263)
T 3u2u_A 82 GVTLTKLHCWS--L---TQYSKCVFMDADTLVLANIDDL--FDRE--ELSA--APD-----PGWPDCFNSGVFVYQPSVE 145 (263)
T ss_dssp GGGGGGGGGGG--C---TTCSEEEEECTTEEECSCCGGG--GGSC--SSEE--EEC-----TTSTTSEEEEEEEECCCHH
T ss_pred hHHhHHHHhcc--c---cCcceEEEEcCCEeeccCHHHH--hCCC--cceE--ecc-----CCCCccccCeEEEEcccHH
Confidence 45788876654 2 3579999999999998852211 1111 1110 011 012 479999999998642
Q ss_pred HHHHHHHhcccCCCCccccchhhhhhhhhcCCCCCCCCchhHHHHHHh
Q 012077 282 SLDILDAWAPMGPKGKVRDDAGKKLTKELKDRPAFEADDQSAMVYSLA 329 (471)
Q Consensus 282 S~~fLDaWa~m~P~~pv~~~~g~~L~~~l~~~~~f~~~DQsAL~yLL~ 329 (471)
..+.+.++ + .....+...||+.|..++.
T Consensus 146 ---~~~~l~~~-------------~----~~~~~~~~~DQd~LN~~f~ 173 (263)
T 3u2u_A 146 ---TYNQLLHL-------------A----SEQGSFDGGDQGILNTFFS 173 (263)
T ss_dssp ---HHHHHHHH-------------H----HHHCCTTSSHHHHHHHHTT
T ss_pred ---HHHHHHHH-------------H----HhcCCCCcccHHHHHHHhc
Confidence 22222211 0 1112456799999999996
No 5
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=94.79 E-value=0.35 Score=46.79 Aligned_cols=124 Identities=15% Similarity=0.176 Sum_probs=56.6
Q ss_pred HHHHHhCCcEEE-ec--cccCc-ccccccchHHHHHHHHhc-CC-CccEEEEeeCCceeecCCCC---CCccccCCCCee
Q 012077 182 DYCRVHGLEIFY-ST--ALLDA-EMAGFWAKLPLIRNLLLG-HP-EVEFLWWMDSDAMFTDMTFE---VPWERYKDYNLV 252 (471)
Q Consensus 182 ~YAr~HGY~~~~-~~--~~ld~-~~~~~WaKip~IR~aL~a-~P-eaEWIwWLDsDAlImNp~~s---LpLe~~~d~nLv 252 (471)
..+...|.++.+ .. ..+.. .....|+...+.|-.+-. .| +++.|+|||+|++|...=-+ +++ .+..+.
T Consensus 55 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl---~~~~~a 131 (276)
T 3tzt_A 55 EDLKKFSYTLYPIRATDDLFSFAKVTDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDI---SDYILA 131 (276)
T ss_dssp HHHHTTTCEEEEEECC-------------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCC---TTSSEE
T ss_pred HHHHHcCCEEEEEEeCHHHHhcCccccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCC---CCCeEE
Confidence 345566776653 21 11211 112236555555554432 27 69999999999999864111 121 111111
Q ss_pred e--c-C---c----cceeeeCCCCccccccceeEeccHHHH-----HHHHHhcccCCCCccccchhhhhhhhhcCCCCCC
Q 012077 253 M--H-G---W----NEMVYDQKNWIGLNTGSFLLRNCQWSL-----DILDAWAPMGPKGKVRDDAGKKLTKELKDRPAFE 317 (471)
Q Consensus 253 I--~-g---~----~dlI~tqddw~GLNtGsFLIRNs~WS~-----~fLDaWa~m~P~~pv~~~~g~~L~~~l~~~~~f~ 317 (471)
. . + + ..+-+.... .++|+|+++|-...|-. .+++.... ....+.
T Consensus 132 av~d~~~~~~~~~~~~~~l~~~~-~yfNsGV~linl~~~R~~~~~~~~~~~~~~--------------------~~~~~~ 190 (276)
T 3tzt_A 132 AASHTGKTDMANNVNRIRLGTDT-DYYNSGLLLINLKRAREEIDPDEIFSFVED--------------------NHMNLL 190 (276)
T ss_dssp EEEC---------------------CEEEEEEEEEHHHHHHHCCHHHHHHHHHH--------------------C-----
T ss_pred EEEecccchHHHHHHHhcCCCCC-CeEEeeEEEEEHHHHHhhhHHHHHHHHHHh--------------------cccccc
Confidence 0 0 0 0 011111112 58999999999888754 33332211 111344
Q ss_pred CCchhHHHHHHh
Q 012077 318 ADDQSAMVYSLA 329 (471)
Q Consensus 318 ~~DQsAL~yLL~ 329 (471)
..||++|..++.
T Consensus 191 ~~DQd~LN~~f~ 202 (276)
T 3tzt_A 191 LPDQDILNAMYG 202 (276)
T ss_dssp ---CHHHHHHHG
T ss_pred CCChhHHHHHHh
Confidence 689999998886
No 6
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=53.65 E-value=77 Score=30.58 Aligned_cols=77 Identities=8% Similarity=0.014 Sum_probs=44.2
Q ss_pred CCcEEEEEeeCCCCCCCCcchHHHHHHHHHHHHHHHHhC--CcEEEeccccCcccccccchHHHHHHHH----hcCCCcc
Q 012077 150 KPRVLLVTGSSPKACENPVGDHYLLKSIKNKIDYCRVHG--LEIFYSTALLDAEMAGFWAKLPLIRNLL----LGHPEVE 223 (471)
Q Consensus 150 ~prIvIVT~sd~~~c~~~~gd~yL~ksikNk~~YAr~HG--Y~~~~~~~~ld~~~~~~WaKip~IR~aL----~a~PeaE 223 (471)
.++|.||...... ..+|..++..-..+.+... |++++-.. ..+..+++-.++-..+ .. -..|
T Consensus 64 ~~~VSIIIP~yN~-------~~~L~~~L~sl~~~l~q~~~~~EIiVVdd----s~d~~f~~a~a~N~G~~~al~~-A~gd 131 (287)
T 2fy7_A 64 PHKVAIIIPFRNR-------QEHLKYWLYYLHPVLQRQQLDYGIYVINQ----AGDTIFNRAKLLNVGFQEALKD-YDYT 131 (287)
T ss_dssp SCEEEEEEEESSC-------HHHHHHHHHHHHHHHHHTTCEEEEEEEEE----CSSSCCCHHHHHHHHHHHHHHH-SCCC
T ss_pred CCcEEEEEeeCCC-------HHHHHHHHHHHHHHHHHhcCCceEEEEEe----CCCCccchhhhhhhHHHHHHHh-CCCC
Confidence 4678777765432 3556666666554434443 44543111 1223355554444433 32 4689
Q ss_pred EEEEeeCCceeecCC
Q 012077 224 FLWWMDSDAMFTDMT 238 (471)
Q Consensus 224 WIwWLDsDAlImNp~ 238 (471)
||+++|+|+++.+-.
T Consensus 132 ~i~flD~D~i~~~d~ 146 (287)
T 2fy7_A 132 CFVFSDVDLIPMNDH 146 (287)
T ss_dssp EEEEECTTEEESBTT
T ss_pred EEEEECCCcccCCCc
Confidence 999999999887653
No 7
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=44.25 E-value=22 Score=33.84 Aligned_cols=52 Identities=15% Similarity=0.157 Sum_probs=31.2
Q ss_pred HHHHHHHHhCCcEEEeccccCcccccccchHHHHHHHHhcCCCccEEEEeeCCceee
Q 012077 179 NKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFT 235 (471)
Q Consensus 179 Nk~~YAr~HGY~~~~~~~~ld~~~~~~WaKip~IR~aL~a~PeaEWIwWLDsDAlIm 235 (471)
.-+.-|.++|+++..... ++-.+.+ +=.++-..| +.+++++++|||+|.+=+
T Consensus 16 ~l~~~l~~~gi~~~l~~~--~SlI~ra--RN~lv~~Fl-~~~~~dhllfIDAD~~~I 67 (203)
T 2c0n_A 16 PLIDFLVKNDIEYVILSR--RNHVAVQ--REIALDMFL-EMKDYDTLAFLDEDVVPI 67 (203)
T ss_dssp HHHHHHHHTTCCEEEECC--CSCHHHH--HHHHHHHHH-HCTTCCEEEEECTTEEEE
T ss_pred HHHHHHHhCCCeEEEEcc--ccchHHH--HHHHHHHHH-hcCCCCEEEEEeCCCCcc
Confidence 345668889999987433 2222222 222333333 347899999999994433
No 8
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=20.14 E-value=39 Score=27.69 Aligned_cols=26 Identities=19% Similarity=0.359 Sum_probs=19.6
Q ss_pred hHHHHHHh--hccceehhhhhhHHHhhh
Q 012077 10 RSRKFHRA--LRQCKVTALCLVLTVVVL 35 (471)
Q Consensus 10 ~~~~~~~~--~~~~k~t~~c~~~t~~vl 35 (471)
.+|++.|. ..|+|++++.|++.++++
T Consensus 55 ~A~~l~rkmwwkn~K~~iii~~iv~~il 82 (91)
T 3hd7_A 55 SAAKLKRKYWWKNLKMMIILGVICAIIL 82 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34666665 789999988888777665
No 9
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=18.61 E-value=79 Score=27.14 Aligned_cols=18 Identities=17% Similarity=0.228 Sum_probs=14.4
Q ss_pred HHHHHHHHHhCCcEEEec
Q 012077 178 KNKIDYCRVHGLEIFYST 195 (471)
Q Consensus 178 kNk~~YAr~HGY~~~~~~ 195 (471)
+--+.||++||+++.+..
T Consensus 70 E~AiayAek~G~~y~V~e 87 (108)
T 2lju_A 70 ELAIAYAVAHKIDYTVLQ 87 (108)
T ss_dssp HHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHcCCEEEEec
Confidence 445689999999999753
No 10
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for ST proteomics, OCSP; NMR {Agrobacterium tumefaciens str}
Probab=16.14 E-value=65 Score=27.60 Aligned_cols=16 Identities=19% Similarity=0.250 Sum_probs=13.4
Q ss_pred HHHHHHHHhCCcEEEe
Q 012077 179 NKIDYCRVHGLEIFYS 194 (471)
Q Consensus 179 Nk~~YAr~HGY~~~~~ 194 (471)
--+.||++||+++.+.
T Consensus 63 ~AiayAek~G~~y~V~ 78 (106)
T 2jya_A 63 QAEAYAQRKGIEYRVI 78 (106)
T ss_dssp HHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHcCCEEEEe
Confidence 3468999999999974
Done!