Query 012083
Match_columns 471
No_of_seqs 136 out of 1247
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 21:17:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012083.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012083hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 4.1E-70 1.4E-74 540.0 37.3 432 16-470 12-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.3E-65 4.4E-70 518.3 38.9 445 16-470 7-478 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 1.3E-62 4.5E-67 494.6 44.4 434 17-470 6-468 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 2.3E-63 7.8E-68 497.0 37.4 435 16-470 6-451 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 5.7E-61 2E-65 480.9 37.9 427 17-471 9-463 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 5.1E-47 1.8E-51 378.0 35.8 388 8-450 3-405 (424)
7 4amg_A Snogd; transferase, pol 100.0 1.9E-45 6.7E-50 363.8 26.9 358 16-469 21-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 2.9E-43 9.9E-48 349.7 28.4 372 18-469 1-398 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 3.1E-42 1.1E-46 342.5 34.4 377 9-467 16-410 (415)
10 1rrv_A Glycosyltransferase GTF 100.0 3.6E-42 1.2E-46 342.1 28.5 357 18-450 1-385 (416)
11 3ia7_A CALG4; glycosysltransfe 100.0 1E-40 3.4E-45 330.2 34.9 370 18-465 5-393 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 7.6E-41 2.6E-45 330.8 28.8 350 18-449 1-366 (404)
13 2yjn_A ERYCIII, glycosyltransf 100.0 2.8E-40 9.6E-45 330.9 29.9 354 18-450 21-419 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 3.5E-39 1.2E-43 322.1 34.3 360 18-451 8-384 (430)
15 2p6p_A Glycosyl transferase; X 100.0 5.3E-39 1.8E-43 315.9 34.0 348 18-465 1-374 (384)
16 3oti_A CALG3; calicheamicin, T 100.0 1.1E-37 3.8E-42 307.9 25.3 350 17-469 20-395 (398)
17 4fzr_A SSFS6; structural genom 100.0 7.1E-38 2.4E-42 309.3 23.2 341 17-450 15-384 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.1E-35 3.7E-40 293.0 29.9 355 17-468 1-385 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 1.7E-33 5.8E-38 279.3 34.3 345 16-450 19-392 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 3.3E-29 1.1E-33 243.5 26.1 336 17-469 2-354 (365)
21 2o6l_A UDP-glucuronosyltransfe 100.0 1.3E-27 4.3E-32 206.8 14.9 164 271-450 6-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 3E-21 1E-25 187.7 23.8 318 17-448 6-337 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 5.6E-16 1.9E-20 143.0 16.8 115 286-413 157-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 2.4E-15 8.2E-20 133.0 10.0 134 281-431 23-196 (224)
25 1v4v_A UDP-N-acetylglucosamine 99.6 1.3E-13 4.4E-18 134.3 18.9 321 18-443 6-343 (376)
26 3ot5_A UDP-N-acetylglucosamine 99.5 5.1E-13 1.8E-17 130.9 18.3 345 16-467 26-390 (403)
27 3c48_A Predicted glycosyltrans 99.5 2.5E-11 8.7E-16 120.5 29.1 343 18-440 21-397 (438)
28 3okp_A GDP-mannose-dependent a 99.5 3.6E-11 1.2E-15 117.5 28.6 324 16-444 3-354 (394)
29 3dzc_A UDP-N-acetylglucosamine 99.5 4.2E-12 1.4E-16 124.2 21.0 327 18-445 26-378 (396)
30 1vgv_A UDP-N-acetylglucosamine 99.5 2.6E-12 8.7E-17 125.4 18.8 320 18-442 1-350 (384)
31 3fro_A GLGA glycogen synthase; 99.4 5.3E-11 1.8E-15 118.0 24.6 364 16-442 1-404 (439)
32 2gek_A Phosphatidylinositol ma 99.4 1.1E-10 3.8E-15 114.5 24.5 316 17-443 20-358 (406)
33 3beo_A UDP-N-acetylglucosamine 99.4 2.7E-11 9.3E-16 117.6 19.2 325 17-442 8-350 (375)
34 2iuy_A Avigt4, glycosyltransfe 99.3 2.9E-11 9.9E-16 116.0 17.1 133 289-445 164-315 (342)
35 2jjm_A Glycosyl transferase, g 99.3 3.3E-09 1.1E-13 103.6 29.7 325 17-443 15-359 (394)
36 2iw1_A Lipopolysaccharide core 99.3 1.1E-09 3.9E-14 105.9 26.0 159 287-467 196-369 (374)
37 4hwg_A UDP-N-acetylglucosamine 99.3 2.9E-11 9.9E-16 117.4 13.5 317 18-437 10-345 (385)
38 2r60_A Glycosyl transferase, g 99.3 1.8E-09 6.1E-14 109.1 27.0 354 17-441 7-431 (499)
39 2x6q_A Trehalose-synthase TRET 99.1 1E-08 3.5E-13 100.9 22.4 87 343-443 292-388 (416)
40 3s28_A Sucrose synthase 1; gly 98.9 5.6E-07 1.9E-11 94.7 25.9 93 343-447 639-747 (816)
41 2vsy_A XCC0866; transferase, g 98.9 1.8E-06 6.3E-11 88.4 29.3 91 344-445 434-533 (568)
42 1rzu_A Glycogen synthase 1; gl 98.9 2.5E-07 8.5E-12 92.9 22.2 136 288-442 292-451 (485)
43 2qzs_A Glycogen synthase; glyc 98.8 1.6E-06 5.4E-11 87.0 26.4 137 288-442 293-452 (485)
44 3oy2_A Glycosyltransferase B73 98.7 3.2E-06 1.1E-10 82.8 22.5 88 346-447 256-368 (413)
45 2xci_A KDO-transferase, 3-deox 98.6 4.3E-06 1.5E-10 80.8 21.5 92 345-447 261-362 (374)
46 2hy7_A Glucuronosyltransferase 98.5 1.3E-05 4.4E-10 78.4 22.7 76 343-436 264-354 (406)
47 2f9f_A First mannosyl transfer 98.4 7.2E-07 2.5E-11 76.4 8.2 140 288-446 24-175 (177)
48 3q3e_A HMW1C-like glycosyltran 98.1 0.0045 1.5E-07 62.5 28.7 142 286-442 440-596 (631)
49 2x0d_A WSAF; GT4 family, trans 98.1 2.2E-05 7.4E-10 76.9 11.7 85 343-440 294-385 (413)
50 1psw_A ADP-heptose LPS heptosy 97.9 0.0012 4E-08 62.8 20.0 103 18-153 1-106 (348)
51 3tov_A Glycosyl transferase fa 97.8 0.00052 1.8E-08 65.3 16.5 109 12-153 3-115 (349)
52 4gyw_A UDP-N-acetylglucosamine 97.8 0.00035 1.2E-08 73.2 15.3 147 285-440 521-674 (723)
53 3qhp_A Type 1 capsular polysac 97.6 0.00022 7.7E-09 59.7 9.3 137 287-446 2-152 (166)
54 3vue_A GBSS-I, granule-bound s 97.6 0.042 1.4E-06 55.4 27.0 134 288-433 328-476 (536)
55 2bfw_A GLGA glycogen synthase; 97.4 0.0015 5.3E-08 56.3 12.4 86 345-443 96-190 (200)
56 3rhz_A GTF3, nucleotide sugar 97.1 0.00099 3.4E-08 63.0 8.1 108 345-468 215-336 (339)
57 2gt1_A Lipopolysaccharide hept 96.8 0.014 4.8E-07 54.7 13.3 46 18-63 1-48 (326)
58 2phj_A 5'-nucleotidase SURE; S 93.4 0.14 4.7E-06 45.3 6.4 113 18-156 2-127 (251)
59 3ty2_A 5'-nucleotidase SURE; s 92.5 0.11 3.8E-06 46.1 4.4 113 16-156 10-135 (261)
60 2wqk_A 5'-nucleotidase SURE; S 90.9 0.77 2.6E-05 40.8 8.2 112 18-156 2-127 (251)
61 3q0i_A Methionyl-tRNA formyltr 90.7 2.2 7.4E-05 39.4 11.3 35 15-54 5-39 (318)
62 1g5t_A COB(I)alamin adenosyltr 90.3 2.4 8.2E-05 36.0 10.3 98 17-138 28-131 (196)
63 3nb0_A Glycogen [starch] synth 90.0 1.4 4.8E-05 45.0 10.0 46 344-391 490-551 (725)
64 1j9j_A Stationary phase surviV 88.1 1.5 5E-05 38.8 7.6 113 18-156 1-128 (247)
65 1l5x_A SurviVal protein E; str 87.7 1.4 4.8E-05 39.7 7.4 113 18-157 1-128 (280)
66 3io3_A DEHA2D07832P; chaperone 87.6 2 7E-05 40.2 8.9 45 13-57 13-60 (348)
67 4dzz_A Plasmid partitioning pr 87.2 3.8 0.00013 34.6 9.9 82 19-137 2-85 (206)
68 2ywr_A Phosphoribosylglycinami 86.9 6.5 0.00022 33.9 11.0 103 18-157 2-111 (216)
69 2bw0_A 10-FTHFDH, 10-formyltet 86.8 3.6 0.00012 38.1 9.9 102 16-158 21-131 (329)
70 3lqk_A Dipicolinate synthase s 86.4 0.72 2.5E-05 39.4 4.6 50 11-60 1-50 (201)
71 2e6c_A 5'-nucleotidase SURE; S 86.0 2.8 9.6E-05 36.9 8.2 111 18-156 1-129 (244)
72 2yxb_A Coenzyme B12-dependent 85.9 3.1 0.00011 34.1 8.1 45 16-60 17-61 (161)
73 3qxc_A Dethiobiotin synthetase 85.6 2.6 9E-05 37.2 8.0 34 18-51 21-56 (242)
74 3tqr_A Phosphoribosylglycinami 85.5 5 0.00017 34.6 9.5 108 13-157 1-114 (215)
75 3t5t_A Putative glycosyltransf 84.8 3.1 0.0001 41.0 8.8 106 345-470 353-471 (496)
76 3auf_A Glycinamide ribonucleot 84.7 7.9 0.00027 33.7 10.5 103 18-157 23-132 (229)
77 3fgn_A Dethiobiotin synthetase 84.1 12 0.0004 33.1 11.6 37 15-51 23-61 (251)
78 3kjh_A CO dehydrogenase/acetyl 83.6 7.1 0.00024 34.0 10.2 38 18-55 1-38 (254)
79 3av3_A Phosphoribosylglycinami 83.4 7.5 0.00026 33.4 9.7 103 18-157 4-113 (212)
80 1fmt_A Methionyl-tRNA FMet for 83.0 7.6 0.00026 35.7 10.2 34 16-54 2-35 (314)
81 3qjg_A Epidermin biosynthesis 82.4 1.8 6.2E-05 36.0 5.2 45 17-62 5-49 (175)
82 4dim_A Phosphoribosylglycinami 82.1 6 0.0002 37.7 9.6 38 12-55 3-40 (403)
83 2v4n_A Multifunctional protein 81.7 3.1 0.0001 36.9 6.6 111 18-156 2-126 (254)
84 3lrx_A Putative hydrogenase; a 80.9 20 0.0007 28.9 11.2 37 17-56 23-59 (158)
85 2qyt_A 2-dehydropantoate 2-red 80.8 1 3.5E-05 41.5 3.5 47 11-62 2-54 (317)
86 3tqq_A Methionyl-tRNA formyltr 79.9 8.4 0.00029 35.4 9.3 33 17-54 2-34 (314)
87 3zqu_A Probable aromatic acid 79.8 2.5 8.7E-05 36.2 5.3 46 17-63 4-49 (209)
88 1sbz_A Probable aromatic acid 78.7 2.7 9.2E-05 35.7 5.1 45 18-63 1-46 (197)
89 3vot_A L-amino acid ligase, BL 78.2 5.8 0.0002 38.1 8.1 37 13-54 1-37 (425)
90 1ccw_A Protein (glutamate muta 77.8 3.3 0.00011 32.8 5.2 45 16-60 2-46 (137)
91 3igf_A ALL4481 protein; two-do 77.6 3.9 0.00013 38.7 6.4 36 18-53 2-38 (374)
92 3dm5_A SRP54, signal recogniti 77.3 6.9 0.00024 37.8 8.1 43 17-59 100-142 (443)
93 2q5c_A NTRC family transcripti 76.7 17 0.00058 30.7 9.7 44 110-160 129-172 (196)
94 3ug7_A Arsenical pump-driving 76.0 12 0.00041 34.9 9.4 39 18-56 26-65 (349)
95 1qzu_A Hypothetical protein MD 75.7 2.7 9.3E-05 36.0 4.3 50 12-62 14-64 (206)
96 3lyu_A Putative hydrogenase; t 75.0 18 0.0006 28.6 8.9 36 18-56 19-54 (142)
97 3kcq_A Phosphoribosylglycinami 74.7 16 0.00056 31.3 9.0 104 11-157 3-113 (215)
98 3iqw_A Tail-anchored protein t 74.2 40 0.0014 31.1 12.3 41 18-58 16-57 (334)
99 1uqt_A Alpha, alpha-trehalose- 73.6 8.4 0.00029 37.8 7.9 104 346-469 333-451 (482)
100 2iz6_A Molybdenum cofactor car 73.5 15 0.00052 30.4 8.3 78 347-433 92-173 (176)
101 3q9l_A Septum site-determining 73.1 24 0.00083 30.7 10.4 38 18-55 2-41 (260)
102 3rfo_A Methionyl-tRNA formyltr 72.6 26 0.00089 32.1 10.4 33 18-55 5-37 (317)
103 2ejb_A Probable aromatic acid 72.6 5.1 0.00017 33.7 5.2 44 18-62 2-45 (189)
104 3u7q_B Nitrogenase molybdenum- 72.2 31 0.0011 34.1 11.6 33 17-54 364-396 (523)
105 2bln_A Protein YFBG; transfera 70.5 18 0.00062 33.0 8.8 32 18-54 1-32 (305)
106 2xxa_A Signal recognition part 70.4 20 0.00067 34.6 9.5 41 18-58 101-142 (433)
107 3mcu_A Dipicolinate synthase, 70.3 4.5 0.00015 34.6 4.4 44 16-60 4-48 (207)
108 3mc3_A DSRE/DSRF-like family p 70.2 8.8 0.0003 30.1 5.9 44 18-61 16-62 (134)
109 1jkx_A GART;, phosphoribosylgl 70.2 20 0.0007 30.6 8.6 102 18-157 1-110 (212)
110 2vqe_B 30S ribosomal protein S 70.2 11 0.00039 33.2 7.0 34 126-159 157-192 (256)
111 3bfv_A CAPA1, CAPB2, membrane 69.8 34 0.0012 30.4 10.5 40 17-56 81-122 (271)
112 3zq6_A Putative arsenical pump 69.6 48 0.0016 30.3 11.8 38 18-55 14-52 (324)
113 3cio_A ETK, tyrosine-protein k 69.6 25 0.00084 31.9 9.6 39 17-55 103-143 (299)
114 3la6_A Tyrosine-protein kinase 68.5 28 0.00096 31.3 9.7 40 17-56 91-132 (286)
115 4a1f_A DNAB helicase, replicat 67.8 6.1 0.00021 36.8 5.1 42 19-60 48-89 (338)
116 3pdi_B Nitrogenase MOFE cofact 67.2 14 0.00048 35.9 7.8 87 17-154 313-399 (458)
117 1qgu_B Protein (nitrogenase mo 67.1 38 0.0013 33.5 11.0 35 17-56 360-394 (519)
118 1y80_A Predicted cobalamin bin 67.1 8.7 0.0003 32.8 5.7 46 16-61 87-132 (210)
119 1mvl_A PPC decarboxylase athal 67.1 7.5 0.00026 33.3 5.1 46 16-63 18-63 (209)
120 3rg8_A Phosphoribosylaminoimid 67.0 33 0.0011 27.7 8.5 138 288-452 4-150 (159)
121 3ghy_A Ketopantoate reductase 66.9 5 0.00017 37.2 4.4 42 17-63 3-44 (335)
122 3bgw_A DNAB-like replicative h 66.0 18 0.0006 35.1 8.2 43 18-60 198-240 (444)
123 4b4o_A Epimerase family protei 65.4 6.5 0.00022 35.5 4.8 33 18-54 1-33 (298)
124 4ds3_A Phosphoribosylglycinami 65.0 36 0.0012 28.9 9.1 105 16-157 6-117 (209)
125 1id1_A Putative potassium chan 64.6 5.1 0.00017 32.1 3.5 34 16-54 2-35 (153)
126 3i83_A 2-dehydropantoate 2-red 64.5 9.3 0.00032 35.1 5.7 40 18-63 3-42 (320)
127 2vo1_A CTP synthase 1; pyrimid 64.3 7.6 0.00026 34.4 4.6 44 15-58 20-66 (295)
128 3oow_A Phosphoribosylaminoimid 63.5 58 0.002 26.4 12.7 145 287-456 6-161 (166)
129 2fb6_A Conserved hypothetical 63.4 12 0.00042 28.6 5.2 45 13-58 4-52 (117)
130 3hn2_A 2-dehydropantoate 2-red 63.2 11 0.00037 34.5 5.9 40 18-63 3-42 (312)
131 3pdi_A Nitrogenase MOFE cofact 63.0 22 0.00074 34.9 8.3 27 126-155 400-426 (483)
132 2i2x_B MTAC, methyltransferase 62.8 11 0.00037 33.5 5.6 43 16-58 122-164 (258)
133 1mio_A Nitrogenase molybdenum 62.6 26 0.00089 34.8 8.8 33 112-154 448-480 (533)
134 4gi5_A Quinone reductase; prot 62.5 12 0.0004 33.8 5.8 42 10-51 15-59 (280)
135 3dfu_A Uncharacterized protein 62.4 5.2 0.00018 34.9 3.3 37 13-54 2-38 (232)
136 3k96_A Glycerol-3-phosphate de 61.6 4.3 0.00015 38.1 2.8 45 13-62 25-70 (356)
137 1meo_A Phosophoribosylglycinam 61.5 45 0.0015 28.4 9.1 103 18-157 1-110 (209)
138 3hwr_A 2-dehydropantoate 2-red 61.5 8.7 0.0003 35.3 4.9 43 16-63 18-60 (318)
139 1lss_A TRK system potassium up 61.4 6.1 0.00021 30.8 3.4 33 17-54 4-36 (140)
140 1p3y_1 MRSD protein; flavoprot 61.2 5.7 0.0002 33.6 3.3 45 17-62 8-52 (194)
141 1g63_A Epidermin modifying enz 60.8 8.3 0.00028 32.2 4.2 44 18-62 3-46 (181)
142 3eag_A UDP-N-acetylmuramate:L- 60.6 16 0.00053 33.7 6.5 32 18-53 5-36 (326)
143 2ixd_A LMBE-related protein; h 60.3 32 0.0011 30.0 8.2 36 17-52 3-38 (242)
144 2r8r_A Sensor protein; KDPD, P 60.3 13 0.00045 32.2 5.5 39 17-55 6-44 (228)
145 3bbn_B Ribosomal protein S2; s 60.1 58 0.002 28.2 9.5 32 127-158 157-190 (231)
146 3o1l_A Formyltetrahydrofolate 59.8 96 0.0033 28.0 11.4 103 17-157 105-212 (302)
147 2l2q_A PTS system, cellobiose- 59.7 11 0.00037 28.3 4.4 36 16-51 3-38 (109)
148 3ih5_A Electron transfer flavo 59.7 8.6 0.00029 33.2 4.2 109 18-155 4-122 (217)
149 3da8_A Probable 5'-phosphoribo 59.4 30 0.001 29.6 7.6 104 17-157 12-120 (215)
150 1uan_A Hypothetical protein TT 58.4 46 0.0016 28.7 8.8 35 18-52 2-36 (227)
151 1jx7_A Hypothetical protein YC 57.4 18 0.00063 27.1 5.5 44 18-61 2-50 (117)
152 3ezx_A MMCP 1, monomethylamine 57.1 16 0.00056 31.3 5.6 45 16-60 91-135 (215)
153 1f0y_A HCDH, L-3-hydroxyacyl-C 56.4 7.7 0.00026 35.3 3.6 37 13-54 11-47 (302)
154 3obb_A Probable 3-hydroxyisobu 56.2 9.7 0.00033 34.7 4.2 31 18-53 4-34 (300)
155 3u7q_A Nitrogenase molybdenum- 55.7 34 0.0012 33.6 8.2 93 17-154 348-441 (492)
156 1mio_B Nitrogenase molybdenum 55.6 39 0.0014 32.7 8.7 26 126-154 384-409 (458)
157 3ego_A Probable 2-dehydropanto 55.3 14 0.00046 33.8 5.0 41 17-63 2-43 (307)
158 2j37_W Signal recognition part 54.6 47 0.0016 32.6 9.0 43 17-59 101-143 (504)
159 2gk4_A Conserved hypothetical 54.6 18 0.00062 31.4 5.4 23 33-55 31-53 (232)
160 2lpm_A Two-component response 54.6 8.2 0.00028 29.8 2.9 30 126-155 52-86 (123)
161 1kjn_A MTH0777; hypotethical p 54.5 26 0.0009 27.8 5.7 46 18-63 7-54 (157)
162 3tov_A Glycosyl transferase fa 54.2 1E+02 0.0034 28.4 11.0 100 18-157 186-289 (349)
163 3zzm_A Bifunctional purine bio 53.9 44 0.0015 32.6 8.3 43 16-63 8-50 (523)
164 2b8t_A Thymidine kinase; deoxy 53.9 42 0.0014 28.9 7.7 37 19-55 13-50 (223)
165 3gl9_A Response regulator; bet 53.7 20 0.00068 26.9 5.1 34 126-159 45-87 (122)
166 1p9o_A Phosphopantothenoylcyst 53.3 8.5 0.00029 35.2 3.2 39 18-56 37-90 (313)
167 3mjf_A Phosphoribosylamine--gl 53.2 34 0.0012 32.9 7.7 24 18-46 4-27 (431)
168 4hcj_A THIJ/PFPI domain protei 53.2 14 0.00049 30.5 4.4 45 10-55 1-45 (177)
169 3g0o_A 3-hydroxyisobutyrate de 53.0 8.3 0.00029 35.1 3.2 34 16-54 6-39 (303)
170 1o4v_A Phosphoribosylaminoimid 53.0 55 0.0019 27.0 7.6 142 287-454 14-165 (183)
171 2zts_A Putative uncharacterize 52.8 54 0.0018 28.1 8.5 44 18-61 31-75 (251)
172 1o4v_A Phosphoribosylaminoimid 52.7 97 0.0033 25.5 12.5 105 298-433 51-157 (183)
173 3l49_A ABC sugar (ribose) tran 52.0 1.2E+02 0.0041 26.4 11.6 41 13-53 1-43 (291)
174 3to5_A CHEY homolog; alpha(5)b 51.9 16 0.00056 28.5 4.3 35 126-160 56-99 (134)
175 3cty_A Thioredoxin reductase; 51.1 8.9 0.0003 34.9 3.1 48 1-54 1-48 (319)
176 2hy5_A Putative sulfurtransfer 51.0 26 0.00089 27.1 5.4 43 19-61 2-48 (130)
177 2q6t_A DNAB replication FORK h 51.0 21 0.00072 34.5 5.9 42 19-60 202-244 (444)
178 1wcv_1 SOJ, segregation protei 50.9 13 0.00045 32.7 4.1 43 14-56 2-46 (257)
179 1psw_A ADP-heptose LPS heptosy 50.9 23 0.0008 32.5 6.0 103 18-156 181-288 (348)
180 3qvl_A Putative hydantoin race 50.8 53 0.0018 28.7 7.9 37 18-54 2-39 (245)
181 2ew2_A 2-dehydropantoate 2-red 50.5 19 0.00064 32.6 5.3 41 18-63 4-45 (316)
182 1xrs_B D-lysine 5,6-aminomutas 50.5 22 0.00076 31.5 5.3 47 16-62 119-174 (262)
183 1u11_A PURE (N5-carboxyaminoim 50.2 1.1E+02 0.0036 25.3 10.9 146 287-456 22-177 (182)
184 4eg0_A D-alanine--D-alanine li 50.1 23 0.00079 32.3 5.8 39 17-55 13-55 (317)
185 4dll_A 2-hydroxy-3-oxopropiona 49.7 18 0.00061 33.2 4.9 33 17-54 31-63 (320)
186 1yt5_A Inorganic polyphosphate 49.5 13 0.00045 33.0 3.8 52 363-434 42-96 (258)
187 1z7e_A Protein aRNA; rossmann 49.0 29 0.00099 35.5 6.9 32 126-157 74-106 (660)
188 3nrc_A Enoyl-[acyl-carrier-pro 48.9 1.4E+02 0.0047 26.2 11.5 45 13-60 21-67 (280)
189 4egs_A Ribose 5-phosphate isom 48.9 19 0.00064 30.0 4.4 40 9-48 26-66 (180)
190 3kl4_A SRP54, signal recogniti 48.3 29 0.00099 33.4 6.2 43 17-59 97-139 (433)
191 2i2c_A Probable inorganic poly 48.1 14 0.00047 33.1 3.7 52 363-434 36-93 (272)
192 3abi_A Putative uncharacterize 47.9 16 0.00056 34.2 4.4 40 9-54 8-47 (365)
193 2r85_A PURP protein PF1517; AT 47.9 17 0.00059 33.2 4.5 34 17-56 2-35 (334)
194 1e2b_A Enzyme IIB-cellobiose; 47.7 35 0.0012 25.4 5.4 36 18-53 4-39 (106)
195 3s2u_A UDP-N-acetylglucosamine 47.7 36 0.0012 31.7 6.8 36 287-324 4-39 (365)
196 2gt1_A Lipopolysaccharide hept 47.7 1.3E+02 0.0044 27.1 10.6 98 18-157 179-281 (326)
197 2g1u_A Hypothetical protein TM 47.4 22 0.00077 28.3 4.7 34 17-55 19-52 (155)
198 3h7a_A Short chain dehydrogena 46.8 99 0.0034 26.8 9.3 35 18-55 7-41 (252)
199 3k9g_A PF-32 protein; ssgcid, 46.2 21 0.00071 31.5 4.7 43 13-56 22-66 (267)
200 1z82_A Glycerol-3-phosphate de 46.2 14 0.00048 34.1 3.7 33 17-54 14-46 (335)
201 4hb9_A Similarities with proba 46.2 13 0.00045 35.0 3.5 30 18-52 2-31 (412)
202 1ehi_A LMDDL2, D-alanine:D-lac 46.2 19 0.00064 33.9 4.6 38 16-53 2-44 (377)
203 1bg6_A N-(1-D-carboxylethyl)-L 46.1 15 0.0005 34.2 3.8 34 16-54 3-36 (359)
204 3f6r_A Flavodoxin; FMN binding 45.8 29 0.00098 27.3 5.0 39 18-56 2-41 (148)
205 2h78_A Hibadh, 3-hydroxyisobut 45.6 18 0.0006 32.8 4.2 32 18-54 4-35 (302)
206 3fwz_A Inner membrane protein 45.5 15 0.00052 28.8 3.2 34 17-55 7-40 (140)
207 1j8m_F SRP54, signal recogniti 45.2 94 0.0032 28.0 9.0 42 17-58 98-139 (297)
208 3n0v_A Formyltetrahydrofolate 44.9 1.5E+02 0.0053 26.4 10.2 104 16-157 89-197 (286)
209 3tri_A Pyrroline-5-carboxylate 44.9 1E+02 0.0035 27.3 9.2 34 16-54 2-38 (280)
210 3gpi_A NAD-dependent epimerase 44.9 23 0.0008 31.4 4.9 33 17-54 3-35 (286)
211 4etn_A LMPTP, low molecular we 44.7 24 0.00081 29.4 4.4 44 10-53 27-73 (184)
212 3p9x_A Phosphoribosylglycinami 44.7 1.4E+02 0.0049 25.2 10.1 103 18-157 3-112 (211)
213 3doj_A AT3G25530, dehydrogenas 44.4 21 0.00071 32.5 4.5 32 18-54 22-53 (310)
214 3t6k_A Response regulator rece 44.3 32 0.0011 26.3 5.1 34 126-159 47-89 (136)
215 3gi1_A LBP, laminin-binding pr 44.3 93 0.0032 27.8 8.7 79 46-156 179-259 (286)
216 4gbj_A 6-phosphogluconate dehy 44.2 18 0.00061 32.8 3.9 34 10-51 1-34 (297)
217 1pq4_A Periplasmic binding pro 44.2 1.7E+02 0.0057 26.2 10.4 81 47-161 191-273 (291)
218 1qkk_A DCTD, C4-dicarboxylate 43.0 74 0.0025 24.6 7.2 62 381-448 74-135 (155)
219 1ks9_A KPA reductase;, 2-dehyd 42.9 16 0.00054 32.7 3.3 32 18-54 1-32 (291)
220 2h31_A Multifunctional protein 42.8 1.6E+02 0.0056 27.9 10.3 141 286-452 265-413 (425)
221 3ius_A Uncharacterized conserv 42.5 36 0.0012 30.1 5.8 34 18-56 6-39 (286)
222 2dzd_A Pyruvate carboxylase; b 42.4 90 0.0031 30.0 9.0 34 18-56 7-40 (461)
223 2pn1_A Carbamoylphosphate synt 42.1 28 0.00096 31.8 5.0 34 15-54 2-37 (331)
224 3nbm_A PTS system, lactose-spe 41.9 33 0.0011 25.6 4.4 37 16-52 5-41 (108)
225 1gsa_A Glutathione synthetase; 41.9 20 0.00069 32.3 4.0 37 18-54 2-41 (316)
226 1e4e_A Vancomycin/teicoplanin 41.9 17 0.00058 33.6 3.5 38 16-53 2-43 (343)
227 3kuu_A Phosphoribosylaminoimid 41.7 1.4E+02 0.0049 24.3 10.9 147 287-456 13-168 (174)
228 3f6p_A Transcriptional regulat 41.6 38 0.0013 25.0 5.0 34 126-159 45-84 (120)
229 3qsg_A NAD-binding phosphogluc 41.5 18 0.00063 32.9 3.6 34 16-54 23-57 (312)
230 2yvq_A Carbamoyl-phosphate syn 41.5 42 0.0015 26.5 5.3 97 21-154 27-131 (143)
231 4huj_A Uncharacterized protein 41.3 13 0.00044 32.0 2.4 33 16-53 22-54 (220)
232 2c5m_A CTP synthase; cytidine 41.3 20 0.00068 31.5 3.4 42 17-58 22-66 (294)
233 3sju_A Keto reductase; short-c 40.9 1.1E+02 0.0038 26.9 8.7 35 17-54 23-57 (279)
234 2q62_A ARSH; alpha/beta, flavo 40.9 38 0.0013 29.7 5.4 37 17-53 34-73 (247)
235 3qjg_A Epidermin biosynthesis 40.8 76 0.0026 26.1 6.9 113 287-408 7-142 (175)
236 2i87_A D-alanine-D-alanine lig 40.3 15 0.00051 34.4 2.8 38 16-53 2-43 (364)
237 3c24_A Putative oxidoreductase 40.1 26 0.0009 31.3 4.4 33 17-54 11-44 (286)
238 3m6m_D Sensory/regulatory prot 40.1 31 0.001 26.7 4.3 33 126-158 57-100 (143)
239 2r6a_A DNAB helicase, replicat 40.1 37 0.0013 32.8 5.7 42 18-59 204-246 (454)
240 3e8x_A Putative NAD-dependent 40.0 85 0.0029 26.6 7.6 37 16-56 20-56 (236)
241 3lk7_A UDP-N-acetylmuramoylala 39.7 55 0.0019 31.6 6.9 33 16-53 8-40 (451)
242 1xmp_A PURE, phosphoribosylami 39.7 1.5E+02 0.0052 24.1 13.3 145 286-454 11-165 (170)
243 2vpq_A Acetyl-COA carboxylase; 39.6 70 0.0024 30.7 7.6 32 18-54 2-33 (451)
244 3e5n_A D-alanine-D-alanine lig 39.6 19 0.00066 34.0 3.5 42 11-54 18-63 (386)
245 3n7t_A Macrophage binding prot 39.6 54 0.0018 28.7 6.2 37 18-54 10-57 (247)
246 3qlj_A Short chain dehydrogena 38.6 1.8E+02 0.0063 26.1 10.1 39 12-53 21-59 (322)
247 3v8b_A Putative dehydrogenase, 38.4 1.4E+02 0.0048 26.3 9.1 35 18-55 28-62 (283)
248 1u0t_A Inorganic polyphosphate 38.3 15 0.00052 33.5 2.5 29 362-390 75-107 (307)
249 2o1e_A YCDH; alpha-beta protei 38.0 1.5E+02 0.0052 26.8 9.2 79 46-156 190-270 (312)
250 3l4b_C TRKA K+ channel protien 38.0 14 0.00047 31.6 2.0 33 18-55 1-33 (218)
251 1q57_A DNA primase/helicase; d 37.9 60 0.0021 31.8 6.9 42 19-60 244-286 (503)
252 1cp2_A CP2, nitrogenase iron p 37.9 35 0.0012 30.0 4.8 37 18-54 2-38 (269)
253 2ffh_A Protein (FFH); SRP54, s 37.9 1.4E+02 0.0047 28.5 9.1 42 18-59 99-140 (425)
254 2raf_A Putative dinucleotide-b 37.9 26 0.0009 29.7 3.8 32 17-53 19-50 (209)
255 3llv_A Exopolyphosphatase-rela 37.8 22 0.00075 27.7 3.1 33 18-55 7-39 (141)
256 2pju_A Propionate catabolism o 37.8 34 0.0012 29.5 4.4 41 109-156 140-180 (225)
257 1iow_A DD-ligase, DDLB, D-ALA\ 37.6 53 0.0018 29.3 6.1 38 17-54 2-43 (306)
258 3kkl_A Probable chaperone prot 37.6 50 0.0017 28.9 5.6 37 18-54 4-51 (244)
259 3goc_A Endonuclease V; alpha-b 37.5 33 0.0011 29.8 4.2 30 126-155 106-142 (237)
260 3l4e_A Uncharacterized peptida 37.4 63 0.0021 27.3 6.1 43 278-320 20-62 (206)
261 4e5s_A MCCFLIKE protein (BA_56 37.4 34 0.0012 31.6 4.6 73 299-390 62-136 (331)
262 3rot_A ABC sugar transporter, 37.3 2.1E+02 0.0072 25.0 10.3 30 126-155 60-93 (297)
263 3ic5_A Putative saccharopine d 37.2 27 0.00092 25.8 3.4 33 18-55 6-39 (118)
264 4grd_A N5-CAIR mutase, phospho 36.9 1.7E+02 0.0058 23.8 12.3 145 286-453 12-165 (173)
265 3sc4_A Short chain dehydrogena 36.8 1.5E+02 0.0052 26.1 9.0 35 18-55 9-43 (285)
266 3bfj_A 1,3-propanediol oxidore 36.5 2.5E+02 0.0086 26.1 10.8 20 36-55 23-43 (387)
267 2a33_A Hypothetical protein; s 36.3 53 0.0018 28.0 5.4 37 18-54 14-54 (215)
268 1dbw_A Transcriptional regulat 36.3 62 0.0021 24.0 5.5 34 126-159 46-86 (126)
269 3czc_A RMPB; alpha/beta sandwi 36.1 45 0.0015 24.9 4.4 36 18-53 19-56 (110)
270 2an1_A Putative kinase; struct 36.0 26 0.00088 31.6 3.6 27 363-389 64-94 (292)
271 1tvm_A PTS system, galactitol- 35.9 66 0.0022 24.1 5.4 36 17-52 21-57 (113)
272 2vou_A 2,6-dihydroxypyridine h 35.8 28 0.00096 32.8 4.0 37 13-54 1-37 (397)
273 3ew7_A LMO0794 protein; Q8Y8U8 35.8 28 0.00094 29.3 3.6 34 18-55 1-34 (221)
274 2w36_A Endonuclease V; hypoxan 35.8 53 0.0018 28.3 5.2 30 126-155 102-138 (225)
275 1vlj_A NADH-dependent butanol 35.7 2.5E+02 0.0086 26.4 10.7 20 36-55 33-53 (407)
276 3t7c_A Carveol dehydrogenase; 35.4 1.6E+02 0.0056 26.1 9.0 35 17-54 27-61 (299)
277 4g65_A TRK system potassium up 35.3 14 0.00046 36.1 1.7 33 17-54 3-35 (461)
278 3tox_A Short chain dehydrogena 35.3 2.1E+02 0.0072 25.1 9.7 34 18-54 8-41 (280)
279 3lou_A Formyltetrahydrofolate 35.2 2.5E+02 0.0084 25.2 10.9 102 17-156 95-201 (292)
280 2nly_A BH1492 protein, diverge 34.9 2.3E+02 0.0077 24.7 10.5 39 109-153 114-155 (245)
281 1p3y_1 MRSD protein; flavoprot 34.9 68 0.0023 26.9 5.8 138 287-434 10-186 (194)
282 1evy_A Glycerol-3-phosphate de 34.8 21 0.00072 33.3 2.9 31 19-54 17-47 (366)
283 2qh8_A Uncharacterized protein 34.8 1.8E+02 0.006 25.7 9.2 30 126-155 68-97 (302)
284 3pdu_A 3-hydroxyisobutyrate de 34.7 30 0.001 30.9 3.9 32 18-54 2-33 (287)
285 1g3q_A MIND ATPase, cell divis 34.7 45 0.0015 28.5 4.9 38 18-55 2-41 (237)
286 4e5v_A Putative THUA-like prot 34.6 45 0.0015 29.9 4.9 39 15-54 2-43 (281)
287 1txg_A Glycerol-3-phosphate de 34.3 31 0.0011 31.5 4.0 31 18-53 1-31 (335)
288 3end_A Light-independent proto 34.3 47 0.0016 29.9 5.2 38 18-55 42-79 (307)
289 3obi_A Formyltetrahydrofolate 34.2 2E+02 0.007 25.6 9.2 102 17-156 89-196 (288)
290 3bul_A Methionine synthase; tr 34.2 52 0.0018 32.9 5.6 46 16-61 97-142 (579)
291 3c3m_A Response regulator rece 34.1 56 0.0019 24.8 5.0 32 126-157 46-86 (138)
292 1pno_A NAD(P) transhydrogenase 34.0 41 0.0014 27.2 3.9 40 17-56 23-65 (180)
293 2a5l_A Trp repressor binding p 34.0 54 0.0019 27.1 5.2 38 18-55 6-44 (200)
294 3euw_A MYO-inositol dehydrogen 33.9 1.6E+02 0.0054 26.8 8.9 109 287-412 6-122 (344)
295 3i12_A D-alanine-D-alanine lig 33.9 27 0.00092 32.6 3.5 39 16-54 2-44 (364)
296 3r5x_A D-alanine--D-alanine li 33.7 36 0.0012 30.6 4.2 45 17-61 3-51 (307)
297 1xjc_A MOBB protein homolog; s 33.7 70 0.0024 26.1 5.5 38 18-55 5-42 (169)
298 3b6i_A Flavoprotein WRBA; flav 33.6 52 0.0018 27.2 5.0 38 18-55 2-41 (198)
299 2ark_A Flavodoxin; FMN, struct 33.6 51 0.0017 27.2 4.9 38 18-55 5-44 (188)
300 3c01_A Surface presentation of 33.6 80 0.0027 19.7 4.4 31 420-450 2-32 (48)
301 1d4o_A NADP(H) transhydrogenas 33.5 42 0.0014 27.3 3.9 39 18-56 23-64 (184)
302 4fn4_A Short chain dehydrogena 33.5 1.5E+02 0.005 26.0 8.1 34 18-54 7-40 (254)
303 3oid_A Enoyl-[acyl-carrier-pro 33.5 2.1E+02 0.0072 24.7 9.2 32 18-52 4-35 (258)
304 3fwy_A Light-independent proto 33.2 48 0.0016 30.2 5.0 46 10-55 40-86 (314)
305 2qk4_A Trifunctional purine bi 33.2 1.5E+02 0.0051 28.3 8.8 32 17-53 24-56 (452)
306 3hl0_A Maleylacetate reductase 33.2 2E+02 0.0067 26.6 9.3 33 126-158 86-121 (353)
307 1t1j_A Hypothetical protein; s 33.1 61 0.0021 25.0 4.7 32 18-49 8-47 (125)
308 1i36_A Conserved hypothetical 33.0 30 0.001 30.4 3.5 30 18-52 1-30 (264)
309 3gt7_A Sensor protein; structu 32.9 58 0.002 25.4 5.0 33 126-158 50-91 (154)
310 3pgx_A Carveol dehydrogenase; 32.8 1.3E+02 0.0045 26.4 7.8 34 17-53 14-47 (280)
311 3trh_A Phosphoribosylaminoimid 32.6 2E+02 0.0068 23.3 13.5 143 287-452 7-158 (169)
312 3imf_A Short chain dehydrogena 32.5 2.1E+02 0.0072 24.6 9.1 34 18-54 6-39 (257)
313 1kjq_A GART 2, phosphoribosylg 32.4 40 0.0014 31.6 4.5 38 13-55 7-44 (391)
314 2afh_E Nitrogenase iron protei 32.3 49 0.0017 29.4 4.9 37 18-54 3-39 (289)
315 1ydh_A AT5G11950; structural g 32.2 57 0.0019 27.9 4.9 37 18-54 10-50 (216)
316 2izz_A Pyrroline-5-carboxylate 32.0 37 0.0013 31.0 4.0 35 16-55 21-59 (322)
317 3ga2_A Endonuclease V; alpha-b 31.9 41 0.0014 29.3 3.9 30 126-155 108-144 (246)
318 1vpd_A Tartronate semialdehyde 31.7 40 0.0014 30.2 4.2 32 18-54 6-37 (299)
319 1o97_C Electron transferring f 31.6 47 0.0016 29.4 4.5 31 126-156 111-147 (264)
320 2zki_A 199AA long hypothetical 31.5 47 0.0016 27.5 4.4 37 18-55 5-42 (199)
321 4ibo_A Gluconate dehydrogenase 31.5 2.6E+02 0.0089 24.3 9.6 34 18-54 26-59 (271)
322 3kuu_A Phosphoribosylaminoimid 31.5 89 0.0031 25.5 5.6 48 13-61 8-57 (174)
323 3a10_A Response regulator; pho 31.4 84 0.0029 22.6 5.4 32 126-157 44-82 (116)
324 1hdo_A Biliverdin IX beta redu 31.4 85 0.0029 25.7 6.0 34 18-55 4-37 (206)
325 2a33_A Hypothetical protein; s 31.3 97 0.0033 26.4 6.2 44 347-390 94-147 (215)
326 3cky_A 2-hydroxymethyl glutara 31.2 44 0.0015 29.9 4.4 32 17-53 4-35 (301)
327 3nhm_A Response regulator; pro 31.1 80 0.0027 23.5 5.4 32 126-157 46-86 (133)
328 4b4k_A N5-carboxyaminoimidazol 31.1 2.2E+02 0.0075 23.4 13.4 145 286-454 22-176 (181)
329 4e21_A 6-phosphogluconate dehy 31.1 30 0.001 32.4 3.2 34 16-54 21-54 (358)
330 2uyy_A N-PAC protein; long-cha 31.1 35 0.0012 31.0 3.7 34 16-54 29-62 (316)
331 3q2i_A Dehydrogenase; rossmann 31.1 1.4E+02 0.0049 27.3 8.1 127 287-434 15-150 (354)
332 3qha_A Putative oxidoreductase 31.0 32 0.0011 31.0 3.4 33 17-54 15-47 (296)
333 3eod_A Protein HNR; response r 31.0 68 0.0023 23.8 4.9 34 126-159 50-90 (130)
334 1vma_A Cell division protein F 31.0 2.8E+02 0.0094 25.0 9.7 41 18-58 105-145 (306)
335 1jay_A Coenzyme F420H2:NADP+ o 30.8 39 0.0013 28.4 3.7 32 18-54 1-33 (212)
336 4e7p_A Response regulator; DNA 30.8 79 0.0027 24.3 5.4 43 113-159 56-105 (150)
337 3bzy_A ESCU; auto cleavage pro 30.8 95 0.0033 19.9 4.5 34 417-450 5-38 (54)
338 3pnx_A Putative sulfurtransfer 30.8 63 0.0022 26.1 4.7 43 21-63 9-51 (160)
339 2fsv_C NAD(P) transhydrogenase 30.7 49 0.0017 27.5 3.9 40 17-56 46-88 (203)
340 2rjn_A Response regulator rece 30.7 71 0.0024 24.7 5.1 34 126-159 50-90 (154)
341 1pzg_A LDH, lactate dehydrogen 30.6 29 0.00098 32.0 3.0 38 13-55 5-43 (331)
342 1zu4_A FTSY; GTPase, signal re 30.6 2.6E+02 0.009 25.3 9.6 41 18-58 106-146 (320)
343 3ruf_A WBGU; rossmann fold, UD 30.5 38 0.0013 31.0 3.9 39 13-55 21-59 (351)
344 3e9m_A Oxidoreductase, GFO/IDH 30.5 1.6E+02 0.0055 26.7 8.2 128 287-434 7-142 (330)
345 1y81_A Conserved hypothetical 30.5 1.9E+02 0.0064 22.4 7.4 36 17-54 14-50 (138)
346 3of5_A Dethiobiotin synthetase 30.5 61 0.0021 27.9 4.9 34 18-51 4-39 (228)
347 1sby_A Alcohol dehydrogenase; 30.4 1E+02 0.0035 26.6 6.6 37 15-55 3-40 (254)
348 1oi4_A Hypothetical protein YH 30.4 1.1E+02 0.0036 25.4 6.4 38 17-55 23-60 (193)
349 2qs7_A Uncharacterized protein 30.4 77 0.0026 24.9 5.2 44 19-62 9-53 (144)
350 1ydg_A Trp repressor binding p 30.4 69 0.0023 26.8 5.3 38 18-55 7-45 (211)
351 2pju_A Propionate catabolism o 30.3 52 0.0018 28.3 4.4 30 362-392 63-92 (225)
352 2rir_A Dipicolinate synthase, 30.3 75 0.0026 28.5 5.8 33 15-52 5-37 (300)
353 4g81_D Putative hexonate dehyd 30.3 1.6E+02 0.0054 25.8 7.7 33 18-53 9-41 (255)
354 3pef_A 6-phosphogluconate dehy 30.3 44 0.0015 29.8 4.2 32 18-54 2-33 (287)
355 1rw7_A YDR533CP; alpha-beta sa 30.2 89 0.003 27.0 6.1 38 18-55 4-52 (243)
356 3grc_A Sensor protein, kinase; 30.2 78 0.0027 23.9 5.2 43 112-158 39-90 (140)
357 1djl_A Transhydrogenase DIII; 30.2 50 0.0017 27.5 3.9 40 17-56 45-87 (207)
358 2rcy_A Pyrroline carboxylate r 30.0 22 0.00077 31.2 2.1 33 16-53 3-39 (262)
359 3dtt_A NADP oxidoreductase; st 29.9 43 0.0015 29.1 3.9 34 16-54 18-51 (245)
360 3uhj_A Probable glycerol dehyd 29.7 1.3E+02 0.0044 28.3 7.4 96 36-159 43-141 (387)
361 3ors_A N5-carboxyaminoimidazol 29.7 2.2E+02 0.0076 22.9 11.7 142 287-453 4-156 (163)
362 3sty_A Methylketone synthase 1 29.6 43 0.0015 28.6 3.9 36 19-54 13-48 (267)
363 2w70_A Biotin carboxylase; lig 29.6 1.2E+02 0.0041 29.0 7.5 31 18-53 3-33 (449)
364 1xgk_A Nitrogen metabolite rep 29.6 49 0.0017 30.6 4.5 37 16-56 4-40 (352)
365 2d1p_A TUSD, hypothetical UPF0 29.5 1.1E+02 0.0039 23.9 5.9 43 18-60 13-59 (140)
366 3t4x_A Oxidoreductase, short c 29.4 67 0.0023 28.1 5.2 34 18-54 10-43 (267)
367 3dqp_A Oxidoreductase YLBE; al 29.4 35 0.0012 28.8 3.2 34 18-55 1-34 (219)
368 2qxy_A Response regulator; reg 29.4 82 0.0028 23.8 5.2 33 126-159 47-86 (142)
369 1tmy_A CHEY protein, TMY; chem 29.4 66 0.0023 23.4 4.5 34 126-159 46-86 (120)
370 1vi6_A 30S ribosomal protein S 29.3 62 0.0021 27.4 4.5 33 126-158 114-148 (208)
371 1u94_A RECA protein, recombina 29.3 2.6E+02 0.009 25.7 9.4 41 18-58 64-104 (356)
372 1efv_B Electron transfer flavo 29.3 55 0.0019 28.8 4.5 31 126-156 115-151 (255)
373 3g17_A Similar to 2-dehydropan 29.2 18 0.00061 32.7 1.3 32 18-54 3-34 (294)
374 4fu0_A D-alanine--D-alanine li 29.2 36 0.0012 31.6 3.5 37 16-52 2-42 (357)
375 1yb4_A Tartronic semialdehyde 29.2 40 0.0014 30.1 3.7 30 18-52 4-33 (295)
376 3r6d_A NAD-dependent epimerase 29.1 57 0.002 27.4 4.6 34 18-54 5-39 (221)
377 3l77_A Short-chain alcohol deh 29.0 55 0.0019 27.9 4.5 34 18-54 2-35 (235)
378 2rdm_A Response regulator rece 28.9 1E+02 0.0035 22.7 5.7 37 13-53 1-37 (132)
379 3f67_A Putative dienelactone h 28.9 69 0.0024 26.8 5.1 36 18-53 32-67 (241)
380 3jzd_A Iron-containing alcohol 28.7 2.2E+02 0.0074 26.4 8.7 33 126-158 88-123 (358)
381 3nrb_A Formyltetrahydrofolate 28.7 3E+02 0.01 24.5 9.3 106 17-157 88-196 (287)
382 2lnd_A De novo designed protei 28.6 55 0.0019 22.6 3.3 49 381-433 50-100 (112)
383 4g6h_A Rotenone-insensitive NA 28.5 32 0.0011 33.8 3.1 35 17-56 42-76 (502)
384 3dhn_A NAD-dependent epimerase 28.5 69 0.0024 26.9 5.0 34 18-55 5-38 (227)
385 1efp_B ETF, protein (electron 28.5 55 0.0019 28.7 4.3 31 126-156 112-148 (252)
386 3l7i_A Teichoic acid biosynthe 28.4 53 0.0018 34.0 4.9 109 350-469 605-718 (729)
387 1xhf_A DYE resistance, aerobic 28.3 91 0.0031 22.7 5.2 34 126-159 46-85 (123)
388 1zgz_A Torcad operon transcrip 28.3 81 0.0028 23.0 4.9 34 126-159 45-84 (122)
389 4ezb_A Uncharacterized conserv 28.2 41 0.0014 30.7 3.6 33 17-54 24-57 (317)
390 3rkr_A Short chain oxidoreduct 28.2 68 0.0023 28.0 5.0 43 10-55 21-63 (262)
391 1hyq_A MIND, cell division inh 28.2 53 0.0018 28.6 4.3 38 18-55 2-41 (263)
392 2jk1_A HUPR, hydrogenase trans 28.2 1.6E+02 0.0055 22.0 6.8 63 381-448 71-133 (139)
393 3hr8_A Protein RECA; alpha and 28.1 3.1E+02 0.011 25.3 9.6 39 19-57 63-101 (356)
394 3hly_A Flavodoxin-like domain; 28.0 71 0.0024 25.5 4.7 38 18-55 1-39 (161)
395 2a9o_A Response regulator; ess 28.0 77 0.0026 23.0 4.7 34 126-159 44-83 (120)
396 2xj4_A MIPZ; replication, cell 27.9 68 0.0023 28.5 5.0 38 18-55 4-43 (286)
397 4dgk_A Phytoene dehydrogenase; 27.7 26 0.00088 34.2 2.3 31 18-53 2-32 (501)
398 3uug_A Multiple sugar-binding 27.7 3.2E+02 0.011 24.1 12.1 31 126-156 58-92 (330)
399 2gf2_A Hibadh, 3-hydroxyisobut 27.7 43 0.0015 29.9 3.7 31 18-53 1-31 (296)
400 3m2t_A Probable dehydrogenase; 27.6 1E+02 0.0035 28.5 6.4 39 352-390 58-101 (359)
401 2bru_C NAD(P) transhydrogenase 27.5 47 0.0016 27.0 3.3 39 18-56 31-72 (186)
402 1srr_A SPO0F, sporulation resp 27.5 65 0.0022 23.7 4.2 34 126-159 46-86 (124)
403 3kht_A Response regulator; PSI 27.4 1.1E+02 0.0037 23.2 5.7 33 126-158 50-91 (144)
404 3sr3_A Microcin immunity prote 27.4 53 0.0018 30.3 4.2 73 299-390 63-137 (336)
405 2qzj_A Two-component response 27.3 74 0.0025 24.0 4.6 34 126-159 47-86 (136)
406 1mv8_A GMD, GDP-mannose 6-dehy 27.2 56 0.0019 31.4 4.5 31 18-53 1-31 (436)
407 3s40_A Diacylglycerol kinase; 27.2 1.1E+02 0.0037 27.5 6.3 81 288-391 12-98 (304)
408 1f4p_A Flavodoxin; electron tr 27.2 56 0.0019 25.5 3.9 36 18-53 1-37 (147)
409 3cu5_A Two component transcrip 27.2 84 0.0029 23.9 4.9 31 126-156 48-85 (141)
410 3ox4_A Alcohol dehydrogenase 2 27.2 1.1E+02 0.0036 28.8 6.4 22 34-55 19-41 (383)
411 3l18_A Intracellular protease 27.2 1.3E+02 0.0044 24.0 6.2 38 17-55 2-39 (168)
412 4hn9_A Iron complex transport 27.2 48 0.0017 30.4 3.9 32 126-157 115-146 (335)
413 4h1h_A LMO1638 protein; MCCF-l 27.1 57 0.0019 29.9 4.3 27 299-325 62-88 (327)
414 3hv2_A Response regulator/HD d 27.1 81 0.0028 24.4 4.9 43 112-158 47-96 (153)
415 2r6j_A Eugenol synthase 1; phe 27.1 55 0.0019 29.4 4.3 33 19-55 13-45 (318)
416 3bch_A 40S ribosomal protein S 26.8 71 0.0024 28.0 4.6 33 126-158 150-184 (253)
417 3gg2_A Sugar dehydrogenase, UD 26.7 44 0.0015 32.3 3.6 33 18-55 3-35 (450)
418 3rqi_A Response regulator prot 26.7 65 0.0022 26.1 4.3 34 126-159 50-90 (184)
419 3lp6_A Phosphoribosylaminoimid 26.6 2.6E+02 0.0089 22.8 11.3 141 287-452 8-157 (174)
420 3md9_A Hemin-binding periplasm 26.5 61 0.0021 28.1 4.3 30 126-155 58-89 (255)
421 3g79_A NDP-N-acetyl-D-galactos 26.5 43 0.0015 32.7 3.5 33 18-55 19-53 (478)
422 3p9x_A Phosphoribosylglycinami 26.4 95 0.0033 26.4 5.3 46 111-156 15-60 (211)
423 3m9w_A D-xylose-binding peripl 26.4 3.3E+02 0.011 23.9 10.0 31 126-156 57-91 (313)
424 3trh_A Phosphoribosylaminoimid 26.4 1.2E+02 0.0041 24.7 5.5 42 16-58 5-48 (169)
425 3l6d_A Putative oxidoreductase 26.4 35 0.0012 30.9 2.8 32 17-53 9-40 (306)
426 3kvo_A Hydroxysteroid dehydrog 26.4 2.8E+02 0.0096 25.3 9.1 35 18-55 45-79 (346)
427 3f2v_A General stress protein 26.3 46 0.0016 27.8 3.3 35 18-52 2-37 (192)
428 3c85_A Putative glutathione-re 26.3 39 0.0013 27.7 2.8 35 16-55 38-73 (183)
429 3guy_A Short-chain dehydrogena 26.2 51 0.0017 28.1 3.7 34 18-54 1-34 (230)
430 3nva_A CTP synthase; rossman f 26.2 72 0.0025 31.4 5.0 42 17-58 2-46 (535)
431 1ydn_A Hydroxymethylglutaryl-C 26.2 2.5E+02 0.0086 24.9 8.6 26 298-323 22-47 (295)
432 2qx0_A 7,8-dihydro-6-hydroxyme 26.2 95 0.0032 25.0 4.9 29 288-316 3-31 (159)
433 3h2s_A Putative NADH-flavin re 26.2 55 0.0019 27.5 3.9 34 18-55 1-34 (224)
434 3i42_A Response regulator rece 26.1 82 0.0028 23.2 4.6 32 126-157 46-86 (127)
435 2pl1_A Transcriptional regulat 26.0 1.1E+02 0.0037 22.1 5.3 34 126-159 43-83 (121)
436 2bi7_A UDP-galactopyranose mut 25.9 48 0.0016 31.1 3.7 35 16-55 2-36 (384)
437 2vrn_A Protease I, DR1199; cys 25.9 1.4E+02 0.0049 24.3 6.4 39 16-55 8-46 (190)
438 2vns_A Metalloreductase steap3 25.9 44 0.0015 28.4 3.2 32 18-54 29-60 (215)
439 3lp8_A Phosphoribosylamine-gly 25.9 2.8E+02 0.0096 26.4 9.3 26 16-46 20-45 (442)
440 1eiw_A Hypothetical protein MT 25.9 96 0.0033 23.2 4.6 63 360-433 38-109 (111)
441 1fjh_A 3alpha-hydroxysteroid d 25.8 74 0.0025 27.4 4.8 32 19-53 2-33 (257)
442 3sbx_A Putative uncharacterize 25.8 79 0.0027 26.3 4.6 38 17-54 13-53 (189)
443 3grp_A 3-oxoacyl-(acyl carrier 25.7 85 0.0029 27.5 5.2 40 12-54 21-60 (266)
444 2hy5_B Intracellular sulfur ox 25.7 1.3E+02 0.0046 23.3 5.7 43 19-61 7-52 (136)
445 3cx3_A Lipoprotein; zinc-bindi 25.6 1.5E+02 0.005 26.4 6.8 40 112-155 215-256 (284)
446 2x5n_A SPRPN10, 26S proteasome 25.6 1.2E+02 0.0042 25.1 5.9 37 18-54 107-144 (192)
447 3iv7_A Alcohol dehydrogenase I 25.5 2.7E+02 0.0092 25.8 8.8 33 126-158 87-122 (364)
448 2jk1_A HUPR, hydrogenase trans 25.5 1E+02 0.0035 23.2 5.2 33 126-158 43-82 (139)
449 1rrm_A Lactaldehyde reductase; 25.4 1.8E+02 0.0063 27.1 7.8 34 126-159 87-143 (386)
450 1ulz_A Pyruvate carboxylase N- 25.4 3.2E+02 0.011 25.9 9.7 32 18-54 3-34 (451)
451 1jbe_A Chemotaxis protein CHEY 25.3 1.1E+02 0.0038 22.5 5.2 33 126-158 48-89 (128)
452 1f9y_A HPPK, protein (6-hydrox 25.1 77 0.0026 25.5 4.2 28 288-315 2-29 (158)
453 3kcn_A Adenylate cyclase homol 25.1 1.7E+02 0.0057 22.4 6.4 52 381-438 75-127 (151)
454 2ph1_A Nucleotide-binding prot 25.1 73 0.0025 27.8 4.6 40 18-57 18-59 (262)
455 3orf_A Dihydropteridine reduct 25.0 69 0.0024 27.7 4.4 34 18-54 22-55 (251)
456 3ip0_A 2-amino-4-hydroxy-6-hyd 24.9 79 0.0027 25.5 4.2 29 288-316 2-30 (158)
457 1p6q_A CHEY2; chemotaxis, sign 24.9 90 0.0031 23.0 4.6 33 126-158 50-91 (129)
458 3lqk_A Dipicolinate synthase s 24.9 3E+02 0.01 22.9 11.1 70 364-434 89-186 (201)
459 1zi8_A Carboxymethylenebutenol 24.8 94 0.0032 25.8 5.2 36 18-53 28-63 (236)
460 1g63_A Epidermin modifying enz 24.8 2.9E+02 0.0098 22.6 9.1 134 288-432 5-176 (181)
461 3ea0_A ATPase, para family; al 24.5 62 0.0021 27.7 4.0 39 18-56 4-45 (245)
462 3g1w_A Sugar ABC transporter; 24.5 3.5E+02 0.012 23.5 10.9 31 126-156 60-94 (305)
463 3cz5_A Two-component response 24.4 1.3E+02 0.0044 23.1 5.6 34 126-159 50-90 (153)
464 3pxx_A Carveol dehydrogenase; 24.4 88 0.003 27.5 5.1 39 13-54 5-43 (287)
465 2vzf_A NADH-dependent FMN redu 24.3 86 0.0029 26.0 4.7 36 18-53 3-42 (197)
466 1t5b_A Acyl carrier protein ph 24.2 80 0.0027 26.0 4.5 36 18-53 2-43 (201)
467 4imr_A 3-oxoacyl-(acyl-carrier 24.2 3.3E+02 0.011 23.7 8.9 34 18-54 33-66 (275)
468 3psh_A Protein HI_1472; substr 24.2 71 0.0024 29.0 4.5 31 126-156 83-114 (326)
469 2zbw_A Thioredoxin reductase; 24.2 47 0.0016 30.1 3.2 35 16-55 4-38 (335)
470 4ao6_A Esterase; hydrolase, th 24.1 68 0.0023 27.9 4.2 39 17-55 55-95 (259)
471 2w84_A Peroxisomal membrane pr 24.1 1E+02 0.0036 20.8 3.9 48 419-469 12-59 (70)
472 2rjo_A Twin-arginine transloca 24.1 3.8E+02 0.013 23.8 10.8 29 128-156 64-96 (332)
473 2f1k_A Prephenate dehydrogenas 24.1 57 0.0019 28.8 3.7 31 18-53 1-31 (279)
474 2q8p_A Iron-regulated surface 23.8 57 0.0019 28.4 3.6 31 126-156 59-90 (260)
475 3rpe_A MDAB, modulator of drug 23.8 88 0.003 26.7 4.6 36 18-53 26-68 (218)
476 2z04_A Phosphoribosylaminoimid 23.8 82 0.0028 29.1 4.9 34 18-56 2-35 (365)
477 4e12_A Diketoreductase; oxidor 23.7 62 0.0021 28.8 3.9 32 18-54 5-36 (283)
478 2cvz_A Dehydrogenase, 3-hydrox 23.6 54 0.0018 29.1 3.5 31 18-54 2-32 (289)
479 2ehd_A Oxidoreductase, oxidore 23.6 99 0.0034 26.2 5.1 33 19-54 6-38 (234)
480 3h5i_A Response regulator/sens 23.6 1.2E+02 0.0042 22.8 5.2 37 13-53 1-37 (140)
481 2x3n_A Probable FAD-dependent 23.5 46 0.0016 31.2 3.1 33 17-54 6-38 (399)
482 3afo_A NADH kinase POS5; alpha 23.5 63 0.0022 30.5 3.9 58 355-434 109-171 (388)
483 2z1m_A GDP-D-mannose dehydrata 23.5 82 0.0028 28.5 4.8 35 17-55 3-37 (345)
484 3j20_B 30S ribosomal protein S 23.4 88 0.003 26.4 4.4 33 126-158 110-144 (202)
485 1byi_A Dethiobiotin synthase; 23.4 92 0.0032 26.1 4.8 33 19-51 3-36 (224)
486 3cg0_A Response regulator rece 23.4 94 0.0032 23.3 4.5 34 126-159 53-93 (140)
487 1ydh_A AT5G11950; structural g 23.4 67 0.0023 27.5 3.7 45 346-390 89-143 (216)
488 3qbc_A 2-amino-4-hydroxy-6-hyd 23.3 93 0.0032 25.1 4.3 28 288-315 6-33 (161)
489 2zyd_A 6-phosphogluconate dehy 23.3 42 0.0014 32.7 2.8 34 16-54 14-47 (480)
490 1zl0_A Hypothetical protein PA 23.3 86 0.0029 28.5 4.7 74 298-390 63-138 (311)
491 1dhr_A Dihydropteridine reduct 23.2 80 0.0027 27.0 4.4 34 18-54 7-40 (241)
492 3slg_A PBGP3 protein; structur 23.2 48 0.0017 30.6 3.2 36 16-55 23-59 (372)
493 2etv_A Iron(III) ABC transport 23.2 54 0.0018 30.2 3.4 31 126-156 95-126 (346)
494 2rjn_A Response regulator rece 23.1 39 0.0013 26.3 2.2 63 381-449 78-141 (154)
495 3ors_A N5-carboxyaminoimidazol 23.1 1.3E+02 0.0044 24.3 5.1 43 17-60 3-47 (163)
496 3kfl_A Methionyl-tRNA syntheta 23.1 34 0.0012 34.2 2.2 52 2-56 13-74 (564)
497 3ax6_A Phosphoribosylaminoimid 22.9 1.1E+02 0.0037 28.4 5.6 33 18-55 2-34 (380)
498 4dyv_A Short-chain dehydrogena 22.8 84 0.0029 27.7 4.6 39 13-54 23-61 (272)
499 3o26_A Salutaridine reductase; 22.8 81 0.0028 28.1 4.6 36 17-55 11-46 (311)
500 1sqs_A Conserved hypothetical 22.7 87 0.003 27.0 4.6 36 18-53 2-41 (242)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=4.1e-70 Score=539.98 Aligned_cols=432 Identities=24% Similarity=0.408 Sum_probs=354.6
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCC--CeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC-
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCR--IKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED- 92 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rG--h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~- 92 (471)
++.||+++|+|++||++|++.||+.|+.+| +.|||++++.+...+.+... ...++++|+.+|+++++..
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~--------~~~~~i~~~~ipdglp~~~~ 83 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN--------EFLPNIKYYNVHDGLPKGYV 83 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS--------CCCTTEEEEECCCCCCTTCC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc--------cCCCCceEEecCCCCCCCcc
Confidence 368999999999999999999999999999 99999999876655532210 1135799999999888762
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
...+...++..+...+.+.+++.++++..... .++|+||+|.++.|+..+|+++|||++.+++++++.+..+++.+.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~ 162 (454)
T 3hbf_A 84 SSGNPREPIFLFIKAMQENFKHVIDEAVAETG-KNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIR 162 (454)
T ss_dssp CCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHH
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHH
Confidence 22333344455555555566666666433211 58999999999999999999999999999999999999988877655
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhh----hh
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSA----NK 248 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~----~~ 248 (471)
...... .......+..+|+++.++..++++ ++.. .....+.+++.+..+...+++.+++||+++||++. ++
T Consensus 163 ~~~~~~---~~~~~~~~~~iPg~p~~~~~dlp~-~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~ 237 (454)
T 3hbf_A 163 EKTGSK---EVHDVKSIDVLPGFPELKASDLPE-GVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNS 237 (454)
T ss_dssp HTCCHH---HHTTSSCBCCSTTSCCBCGGGSCT-TSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHT
T ss_pred hhcCCC---ccccccccccCCCCCCcChhhCch-hhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHh
Confidence 431100 001123344689999999999994 4332 23344566777777888999999999999999864 34
Q ss_pred hCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCC
Q 012083 249 ILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFIN 328 (471)
Q Consensus 249 ~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 328 (471)
..+++++|||++..... ...+.+.++.+||+.++++++|||||||+...+.+++.+++.+|++.+++|||+++..
T Consensus 238 ~~~~v~~vGPl~~~~~~--~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~--- 312 (454)
T 3hbf_A 238 KFKLLLNVGPFNLTTPQ--RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD--- 312 (454)
T ss_dssp TSSCEEECCCHHHHSCC--SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC---
T ss_pred cCCCEEEECCccccccc--ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc---
Confidence 46799999999865431 1234467899999998888999999999998899999999999999999999999865
Q ss_pred CCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcce
Q 012083 329 GSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIG 408 (471)
Q Consensus 329 ~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G 408 (471)
....+|++|.+++++|+++++|+||.++|+|+++++||||||+||++|++++|||||++|++.||+.||+++++.+|+|
T Consensus 313 -~~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~G 391 (454)
T 3hbf_A 313 -PKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIG 391 (454)
T ss_dssp -HHHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSE
T ss_pred -chhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCee
Confidence 2235889999999999999999999999999999999999999999999999999999999999999999999845999
Q ss_pred eeecCCCCCCcCHhHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 409 LWLEPDDNGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 409 ~~~~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
+.+.. ..+++++|.++|+++|+|+ +||+||+++++++++++.+||||++++++||++|+
T Consensus 392 v~l~~---~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 392 VGVDN---GVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp EECGG---GSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred EEecC---CCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 99974 6799999999999999987 89999999999999999999999999999999986
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.3e-65 Score=518.29 Aligned_cols=445 Identities=31% Similarity=0.597 Sum_probs=343.0
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC---
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED--- 92 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--- 92 (471)
+++||+++|+|++||++|++.||++|++|||+|||++++.+.+.+.+...... ....++++|++++++++..+
T Consensus 7 ~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~----~~~~~~i~~~~l~~~lp~~~~~~ 82 (482)
T 2pq6_A 7 RKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKA----FDGFTDFNFESIPDGLTPMEGDG 82 (482)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC----------------CEEEEEECCCCC------
T ss_pred CCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhcccccccc----ccCCCceEEEECCCCCCCccccc
Confidence 35799999999999999999999999999999999999887766543210000 00013899999998776521
Q ss_pred -CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhh
Q 012083 93 -DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKF 171 (471)
Q Consensus 93 -~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~ 171 (471)
...+...++..+...+.+.++++++.+.......+||+||+|.++.|+..+|+++|||++.++++++.....+.+++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 162 (482)
T 2pq6_A 83 DVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSF 162 (482)
T ss_dssp ---CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHH
T ss_pred CcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHH
Confidence 1234555666665778888999998876420016899999999999999999999999999999999887777666766
Q ss_pred hhhCCCCCCccc--cc---ccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhh
Q 012083 172 IEAGIISSDGIV--IK---NEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSA 246 (471)
Q Consensus 172 ~~~~~~~~~~~~--~~---~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~ 246 (471)
...++.+..... .. ......+|+++.+...+++ .+.........+.+++.+..+...+++.+++||+++||++.
T Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~ 241 (482)
T 2pq6_A 163 VERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIV-DFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDV 241 (482)
T ss_dssp HHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSC-GGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHH
T ss_pred HhcCCCCCccccccccccccCccccCCCCCCCchHHCc-hhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHH
Confidence 555655432110 00 1122345677666666665 33332222333455555555667889999999999999863
Q ss_pred ----hhhCCCcceeccccCC-CCC-------C--CCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHH
Q 012083 247 ----NKILPSIIPVGPLIAN-GQP-------T--GNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLE 312 (471)
Q Consensus 247 ----~~~~~~~~~vGp~~~~-~~~-------~--~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~ 312 (471)
++..+++++|||++.. ... . ...++.+.++.+|++.++++++|||||||+...+.+++..++.+|+
T Consensus 242 ~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~ 321 (482)
T 2pq6_A 242 INALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLA 321 (482)
T ss_dssp HHHHHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHH
Confidence 3334789999999763 111 0 1123456678999999888899999999998888889999999999
Q ss_pred hCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeeccccc
Q 012083 313 LAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGH 392 (471)
Q Consensus 313 ~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 392 (471)
+.+++|||+++.....+....+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.
T Consensus 322 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~ 401 (482)
T 2pq6_A 322 NCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFA 401 (482)
T ss_dssp HTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCST
T ss_pred hcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCccc
Confidence 99999999997542111222378899888999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHH-hhhcceeeecCCCCCCcCHhHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHH
Q 012083 393 DHLYIKSCIC-DDWKIGLWLEPDDNGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQ 468 (471)
Q Consensus 393 DQ~~na~~v~-~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 468 (471)
||+.||++++ + +|+|+.+. ..++.++|.++|+++|+|+ +||+||+++++++++++.+||||..++++|+++
T Consensus 402 dQ~~na~~~~~~-~G~g~~l~----~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~ 476 (482)
T 2pq6_A 402 DQPTDCRFICNE-WEIGMEID----TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKD 476 (482)
T ss_dssp THHHHHHHHHHT-SCCEEECC----SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHH-hCEEEEEC----CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 9999999997 6 79999995 4589999999999999998 699999999999999999999999999999998
Q ss_pred Hh
Q 012083 469 IT 470 (471)
Q Consensus 469 ~~ 470 (471)
++
T Consensus 477 ~~ 478 (482)
T 2pq6_A 477 VL 478 (482)
T ss_dssp TT
T ss_pred HH
Confidence 75
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.3e-62 Score=494.60 Aligned_cols=434 Identities=28% Similarity=0.438 Sum_probs=333.4
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCc--chhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC-C
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADC-RIKVTFVTTEF--ICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE-D 92 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~r-Gh~Vt~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~ 92 (471)
++||+++|+|++||++|+++||++|++| ||+|||++++. +...+.+... ....+++|+.+++...+. .
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~--------~~~~~i~~~~l~~~~~~~~~ 77 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD--------SLPSSISSVFLPPVDLTDLS 77 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC---------CCTTEEEEECCCCCCTTSC
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc--------ccCCCceEEEcCCCCCCCCC
Confidence 4899999999999999999999999998 99999999987 4444443210 112489999998653221 1
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCe-eEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhh
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKI-TCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKF 171 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~p-D~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~ 171 (471)
...+....+......+.+.++++++.+.. . .++ |+||+|.++.|+..+|+++|||++.++++++..+..++++|..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~~-~--~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 154 (480)
T 2vch_A 78 SSTRIESRISLTVTRSNPELRKVFDSFVE-G--GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKL 154 (480)
T ss_dssp TTCCHHHHHHHHHHTTHHHHHHHHHHHHH-T--TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHhhhHHHHHHHHHhcc-C--CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHH
Confidence 12233333434455667778888887642 1 578 9999999999999999999999999999999888777777655
Q ss_pred hhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhh--
Q 012083 172 IEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKI-- 249 (471)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~-- 249 (471)
......+ +... .....+|+++++...+++..+. .. .. .....+.+.....++++.+++|++.+|+......
T Consensus 155 ~~~~~~~---~~~~-~~~~~~Pg~~p~~~~~l~~~~~-~~-~~-~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~ 227 (480)
T 2vch_A 155 DETVSCE---FREL-TEPLMLPGCVPVAGKDFLDPAQ-DR-KD-DAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQ 227 (480)
T ss_dssp HHHCCSC---GGGC-SSCBCCTTCCCBCGGGSCGGGS-CT-TS-HHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHH
T ss_pred HhcCCCc---cccc-CCcccCCCCCCCChHHCchhhh-cC-Cc-hHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHH
Confidence 4332111 1100 1112467777777777663322 11 11 2333444455566788899999999999753321
Q ss_pred -----CCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcC
Q 012083 250 -----LPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRP 324 (471)
Q Consensus 250 -----~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 324 (471)
.+++++|||++...... ...+.+.++.+||+.++++++|||||||+...+.+++.+++.+|++++++|||+++.
T Consensus 228 ~~~~~~~~v~~vGpl~~~~~~~-~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~ 306 (480)
T 2vch_A 228 EPGLDKPPVYPVGPLVNIGKQE-AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRS 306 (480)
T ss_dssp SCCTTCCCEEECCCCCCCSCSC-C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred hcccCCCcEEEEeccccccccc-cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECC
Confidence 36899999998754210 012356788999999888899999999998889999999999999999999999986
Q ss_pred CCCCC-----------C-CCCCCchhHHhhCCCcEEEe-ccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccc
Q 012083 325 GFING-----------S-STNNPDGLVAKVADFGKMVK-WAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWG 391 (471)
Q Consensus 325 ~~~~~-----------~-~~~lp~~~~~~~~~nv~~~~-~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~ 391 (471)
....+ . ...+|++|.+++.++.+++. |+||.+||+|++|++||||||+||++||+++|||||++|++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~ 386 (480)
T 2vch_A 307 PSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLY 386 (480)
T ss_dssp CCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred ccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEecccc
Confidence 42111 1 12588899888888888875 99999999999999999999999999999999999999999
Q ss_pred cchhhhHHHH-HhhhcceeeecCCCCCCcCHhHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH
Q 012083 392 HDHLYIKSCI-CDDWKIGLWLEPDDNGIIGRHEIKRKVDELLS---NDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIK 467 (471)
Q Consensus 392 ~DQ~~na~~v-~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~---~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 467 (471)
.||+.||+++ ++ +|+|+.+...+.+.++.++|.++|+++|+ +++||+||+++++++++++.+||+|..++++|++
T Consensus 387 ~DQ~~na~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~ 465 (480)
T 2vch_A 387 AEQKMNAVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVAL 465 (480)
T ss_dssp TTHHHHHHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHH
T ss_pred ccchHHHHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 9999999997 57 89999997522237999999999999998 7899999999999999999999999999999999
Q ss_pred HHh
Q 012083 468 QIT 470 (471)
Q Consensus 468 ~~~ 470 (471)
+++
T Consensus 466 ~~~ 468 (480)
T 2vch_A 466 KWK 468 (480)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.3e-63 Score=496.97 Aligned_cols=435 Identities=24% Similarity=0.425 Sum_probs=332.4
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCe--EEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC-
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIK--VTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED- 92 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~--Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~- 92 (471)
+++||+++|+|++||++|++.||+.|++|||. |||++++.....+.+... +....+++|+.++++++...
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~-------~~~~~~i~~~~i~~glp~~~~ 78 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSM-------HTMQCNIKSYDISDGVPEGYV 78 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC--------------CTTEEEEECCCCCCTTCC
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhcccc-------ccCCCceEEEeCCCCCCCccc
Confidence 35899999999999999999999999999755 688888765544432210 00124899999998776542
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
........+..+...+...++++++++.+... .+||+||+|.++.|+..+|+++|||+|.++++++..+..+.+.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~-~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 157 (456)
T 2c1x_A 79 FAGRPQEDIELFTRAAPESFRQGMVMAVAETG-RPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIR 157 (456)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHH
T ss_pred ccCChHHHHHHHHHHhHHHHHHHHHHHHhccC-CCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHH
Confidence 11223333444444445556666665442211 69999999999999999999999999999999888776665554432
Q ss_pred hh-CCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhh----h
Q 012083 173 EA-GIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSA----N 247 (471)
Q Consensus 173 ~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~----~ 247 (471)
.. +..+. .....+.+..+|+++.++..+++. .+........+.+.+.+......+++.+++||+++||++. +
T Consensus 158 ~~~~~~~~--~~~~~~~~~~~pg~~~~~~~~lp~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~ 234 (456)
T 2c1x_A 158 EKIGVSGI--QGREDELLNFIPGMSKVRFRDLQE-GIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLK 234 (456)
T ss_dssp HHHCSSCC--TTCTTCBCTTSTTCTTCBGGGSCT-TTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHH
T ss_pred hccCCccc--ccccccccccCCCCCcccHHhCch-hhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHH
Confidence 22 21110 011123334578888777777773 2222222223444455555556789999999999999863 3
Q ss_pred hhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCC
Q 012083 248 KILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFI 327 (471)
Q Consensus 248 ~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 327 (471)
+..+++++|||+...... ..++.+.++.+|++.++++++|||||||+...+.+++..++.+|++.+++|||+++..
T Consensus 235 ~~~~~~~~vGpl~~~~~~--~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~-- 310 (456)
T 2c1x_A 235 SKLKTYLNIGPFNLITPP--PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK-- 310 (456)
T ss_dssp HHSSCEEECCCHHHHC-----------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG--
T ss_pred hcCCCEEEecCcccCccc--ccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCc--
Confidence 445799999999865321 1134456788999998888999999999988888899999999999999999999764
Q ss_pred CCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcc
Q 012083 328 NGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKI 407 (471)
Q Consensus 328 ~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~ 407 (471)
....+|++|.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.||+
T Consensus 311 --~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~ 388 (456)
T 2c1x_A 311 --ARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEI 388 (456)
T ss_dssp --GGGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCC
T ss_pred --chhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCe
Confidence 233578888888899999999999999999999999999999999999999999999999999999999999993399
Q ss_pred eeeecCCCCCCcCHhHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 408 GLWLEPDDNGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 408 G~~~~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
|+.+.. ..++.++|.++|+++|+|+ +||+||+++++++++++.+||||.+++++||++++
T Consensus 389 g~~l~~---~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~ 451 (456)
T 2c1x_A 389 GVRIEG---GVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVS 451 (456)
T ss_dssp EEECGG---GSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHT
T ss_pred EEEecC---CCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHH
Confidence 999974 6789999999999999997 89999999999999999999999999999999875
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=5.7e-61 Score=480.93 Aligned_cols=427 Identities=24% Similarity=0.421 Sum_probs=329.7
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcch-----hhhHHhhhcCCCCccCCCCCCeEEEeCCCCC-
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFIC-----ERIKESRQLGSFSEMGDAQQLVRIVPLPDGL- 88 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 88 (471)
++||+++|+|++||++|++.||+.|++| ||+|||++++.+. ..+.+.. ....+++|+.+|++.
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~---------~~~~~i~~~~lp~~~~ 79 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL---------ASQPQIQLIDLPEVEP 79 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH---------CSCTTEEEEECCCCCC
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcc---------cCCCCceEEECCCCCC
Confidence 5899999999999999999999999999 9999999998763 2222210 122489999999763
Q ss_pred CCCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhch
Q 012083 89 EPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNI 168 (471)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 168 (471)
+..+........+......+.+.++++++.+.. .+||+||+|.++.|+..+|+++|||++.++++++..+..++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~----~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~ 155 (463)
T 2acv_A 80 PPQELLKSPEFYILTFLESLIPHVKATIKTILS----NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSL 155 (463)
T ss_dssp CCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHCC----TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHG
T ss_pred CcccccCCccHHHHHHHHhhhHHHHHHHHhccC----CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHH
Confidence 221101111111333345667778888887622 6999999999999999999999999999999999887777766
Q ss_pred hhhhhhCCCCCCccccccc--ccccCCCC-CCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchh
Q 012083 169 PKFIEAGIISSDGIVIKNE--KIELSPYL-PAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPS 245 (471)
Q Consensus 169 p~~~~~~~~~~~~~~~~~~--~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~ 245 (471)
+...... + +..... ....+|++ +++...+++..+... .. ....+.+.....++++.+++||+.+|++.
T Consensus 156 ~~~~~~~--~---~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~---~~-~~~~~~~~~~~~~~~~~~l~nt~~ele~~ 226 (463)
T 2acv_A 156 KNRQIEE--V---FDDSDRDHQLLNIPGISNQVPSNVLPDACFNK---DG-GYIAYYKLAERFRDTKGIIVNTFSDLEQS 226 (463)
T ss_dssp GGSCTTC--C---CCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT---TT-HHHHHHHHHHHHTTSSEEEESCCHHHHHH
T ss_pred HhhcccC--C---CCCccccCceeECCCCCCCCChHHCchhhcCC---ch-HHHHHHHHHHhcccCCEEEECCHHHHhHH
Confidence 5432110 0 111010 02356777 666666555222111 11 33444445556688899999999999986
Q ss_pred hhhh-------CCCcceeccccCCCC-CC-CCCCcCcchhcccccCCCCCcEEEEecCccc-cCCHHHHHHHHHHHHhCC
Q 012083 246 ANKI-------LPSIIPVGPLIANGQ-PT-GNFWSEDLTCLSWLDKQPPGSVIYAAFGSIS-KLSQQQFNELALGLELAG 315 (471)
Q Consensus 246 ~~~~-------~~~~~~vGp~~~~~~-~~-~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~-~~~~~~~~~~~~al~~~~ 315 (471)
...+ .+++++|||+..... .. ...++.+.++.+|++.++++++|||+|||+. ..+.+++..++.+|++.+
T Consensus 227 ~~~~l~~~~~p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~ 306 (463)
T 2acv_A 227 SIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSG 306 (463)
T ss_dssp HHHHHHHHCTTSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHhccccCCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCC
Confidence 5332 578999999986532 10 0001345688999999888899999999998 888888999999999999
Q ss_pred CCEEEEEcCCCCCCCCCCCCchhHHhh--CCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccc
Q 012083 316 QPFLCGVRPGFINGSSTNNPDGLVAKV--ADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHD 393 (471)
Q Consensus 316 ~~~i~~~~~~~~~~~~~~lp~~~~~~~--~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~D 393 (471)
++|||+++.. ...+|++|.++. ++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.|
T Consensus 307 ~~~l~~~~~~-----~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~d 381 (463)
T 2acv_A 307 VRFLWSNSAE-----KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAE 381 (463)
T ss_dssp CEEEEECCCC-----GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTT
T ss_pred CcEEEEECCC-----cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhh
Confidence 9999999752 124778888887 899999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHH-Hhhhcceeee-cCCCCC--CcCHhHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHH
Q 012083 394 HLYIKSCI-CDDWKIGLWL-EPDDNG--IIGRHEIKRKVDELLS-NDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQ 468 (471)
Q Consensus 394 Q~~na~~v-~~~~G~G~~~-~~~~~~--~~~~~~l~~~i~~ll~-~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 468 (471)
|+.||+++ ++ +|+|+.+ ...+.. .++.++|.++|+++|+ +++||+||+++++++++++.+||||..++++||++
T Consensus 382 Q~~Na~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~ 460 (463)
T 2acv_A 382 QQLNAFRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDD 460 (463)
T ss_dssp HHHHHHHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 99999995 78 7999999 311124 6899999999999997 47999999999999999999999999999999999
Q ss_pred HhC
Q 012083 469 ITE 471 (471)
Q Consensus 469 ~~~ 471 (471)
+++
T Consensus 461 ~~~ 463 (463)
T 2acv_A 461 ITG 463 (463)
T ss_dssp HHC
T ss_pred hcC
Confidence 864
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=5.1e-47 Score=378.03 Aligned_cols=388 Identities=15% Similarity=0.194 Sum_probs=268.2
Q ss_pred ccccccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCC
Q 012083 8 SESESLNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDG 87 (471)
Q Consensus 8 ~~~~~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 87 (471)
+++.|+.++.|||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+.+. |++|++++..
T Consensus 3 ~~~~~~~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~--------------g~~~~~~~~~ 68 (424)
T 2iya_A 3 SEHRSASVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA--------------GATPVVYDSI 68 (424)
T ss_dssp --------CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH--------------TCEEEECCCC
T ss_pred cccccCCcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC--------------CCEEEecCcc
Confidence 45555434568999999999999999999999999999999999999998888776 8899998876
Q ss_pred CCCCC-C----cccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHH
Q 012083 88 LEPED-D----RKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGIL 162 (471)
Q Consensus 88 ~~~~~-~----~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 162 (471)
++... . ..+....+..+........+++.+.+++ .+||+||+|.+..++..+|+++|||++.+++.+....
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~ 144 (424)
T 2iya_A 69 LPKESNPEESWPEDQESAMGLFLDEAVRVLPQLEDAYAD----DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYE 144 (424)
T ss_dssp SCCTTCTTCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTT----SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCT
T ss_pred ccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccc
Confidence 54321 1 2233333433333333344455444444 8999999999888999999999999999987654110
Q ss_pred HHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhh----------hccCc
Q 012083 163 AMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQN----------IEASD 232 (471)
Q Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 232 (471)
.. ...+.....+..+ .... ...|. ...... .+.........+.+.+.+.... ...++
T Consensus 145 ~~-~~~~~~~~~~~~~------~~~~-~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 211 (424)
T 2iya_A 145 GF-EEDVPAVQDPTAD------RGEE-AAAPA----GTGDAE-EGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPN 211 (424)
T ss_dssp TH-HHHSGGGSCCCC---------------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCS
T ss_pred cc-ccccccccccccc------cccc-ccccc----ccccch-hhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCC
Confidence 00 0000000000000 0000 00000 000000 0000000001111111111111 12578
Q ss_pred EEEEcchhhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHH
Q 012083 233 RILCTWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLE 312 (471)
Q Consensus 233 ~~l~~s~~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~ 312 (471)
.++++++++|+++...+++++++|||+..... +..+|++..+++++|||++||......+.+..++++++
T Consensus 212 ~~l~~~~~~l~~~~~~~~~~~~~vGp~~~~~~----------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~ 281 (424)
T 2iya_A 212 RCIVALPRTFQIKGDTVGDNYTFVGPTYGDRS----------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVD 281 (424)
T ss_dssp SEEESSCTTTSTTGGGCCTTEEECCCCCCCCG----------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHT
T ss_pred cEEEEcchhhCCCccCCCCCEEEeCCCCCCcc----------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHh
Confidence 89999999999875567789999999764321 12267776666789999999998667788889999999
Q ss_pred hCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeeccccc
Q 012083 313 LAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGH 392 (471)
Q Consensus 313 ~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 392 (471)
+.+.+++|.++... ..+.+ +..++|+++++|+||.++|+|+++ ||||||+||++||+++|||+|++|...
T Consensus 282 ~~~~~~~~~~g~~~-------~~~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~ 351 (424)
T 2iya_A 282 GLDWHVVLSVGRFV-------DPADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIA 351 (424)
T ss_dssp TCSSEEEEECCTTS-------CGGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSH
T ss_pred cCCcEEEEEECCcC-------ChHHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCcc
Confidence 88889999887541 01111 124688999999999999988776 999999999999999999999999999
Q ss_pred chhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Q 012083 393 DHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQK 450 (471)
Q Consensus 393 DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 450 (471)
||..||.++++ +|+|+.+.. ..++.++|.++|+++|+|++++++++++++++++
T Consensus 352 dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 352 EQTMNAERIVE-LGLGRHIPR---DQVTAEKLREAVLAVASDPGVAERLAAVRQEIRE 405 (424)
T ss_dssp HHHHHHHHHHH-TTSEEECCG---GGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHH-CCCEEEcCc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 99999999999 799999974 5689999999999999999999999999999976
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.9e-45 Score=363.82 Aligned_cols=358 Identities=16% Similarity=0.185 Sum_probs=233.9
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC----
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE---- 91 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---- 91 (471)
+.|||||+++|+.||++|+++||++|++|||+|||++++.+.+..+ . ++.+..+.......
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~-~--------------g~~~~~~~~~~~~~~~~~ 85 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE-A--------------GLCAVDVSPGVNYAKLFV 85 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT-T--------------TCEEEESSTTCCSHHHHS
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh-c--------------CCeeEecCCchhHhhhcc
Confidence 3589999999999999999999999999999999999988776433 3 77777765432211
Q ss_pred -------C----CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHH
Q 012083 92 -------D----DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPG 160 (471)
Q Consensus 92 -------~----~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 160 (471)
. .......+...+.......+.++++.+++ ++||+||+|.++.++..+|+.+|||++.+...+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~ 161 (400)
T 4amg_A 86 PDDTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS----WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPAD 161 (400)
T ss_dssp CCC------------CHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTT
T ss_pred ccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCEEEECcchHHHHHHHHHcCCCceeecccccc
Confidence 0 00011111222222233334445454444 89999999999999999999999999987654432
Q ss_pred HHHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhh-hccCcEEEEcch
Q 012083 161 ILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQN-IEASDRILCTWF 239 (471)
Q Consensus 161 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~s~ 239 (471)
......... .+.+.....+..-. .......+....
T Consensus 162 ~~~~~~~~~--------------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~ 197 (400)
T 4amg_A 162 SEPGLGALI--------------------------------------------RRAMSKDYERHGVTGEPTGSVRLTTTP 197 (400)
T ss_dssp CCHHHHHHH--------------------------------------------HHHTHHHHHHTTCCCCCSCEEEEECCC
T ss_pred cccchhhHH--------------------------------------------HHHHHHHHHHhCCCcccccchhhcccC
Confidence 111100000 00000000000000 011222222222
Q ss_pred hhhchh--hhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCC--HHHHHHHHHHHHhCC
Q 012083 240 HELAPS--ANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLS--QQQFNELALGLELAG 315 (471)
Q Consensus 240 ~~l~~~--~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~--~~~~~~~~~al~~~~ 315 (471)
+.+... .....+....+.+... .....+.+|++..+++++|||||||+.... .+.+..+++++++.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~ 268 (400)
T 4amg_A 198 PSVEALLPEDRRSPGAWPMRYVPY---------NGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVD 268 (400)
T ss_dssp HHHHHTSCGGGCCTTCEECCCCCC---------CCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSS
T ss_pred chhhccCcccccCCcccCcccccc---------cccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccC
Confidence 221111 0011112222222111 122334478888888899999999985544 356888999999999
Q ss_pred CCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchh
Q 012083 316 QPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHL 395 (471)
Q Consensus 316 ~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~ 395 (471)
.+++|.+++. ...... ..++|+++++|+||.++|+|+++ ||||||+||++||+++|||+|++|++.||+
T Consensus 269 ~~~v~~~~~~----~~~~~~-----~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~ 337 (400)
T 4amg_A 269 AEFVLTLGGG----DLALLG-----ELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQD 337 (400)
T ss_dssp SEEEEECCTT----CCCCCC-----CCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CH
T ss_pred ceEEEEecCc----cccccc-----cCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHH
Confidence 9999998765 111111 23788999999999999988776 999999999999999999999999999999
Q ss_pred hhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012083 396 YIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469 (471)
Q Consensus 396 ~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 469 (471)
.||+++++ +|+|+.++. ...+. ++|+++|+|++||+||+++++++++. .+. ..+...++++
T Consensus 338 ~na~~v~~-~G~g~~l~~---~~~~~----~al~~lL~d~~~r~~a~~l~~~~~~~----~~~-~~~a~~le~l 398 (400)
T 4amg_A 338 TNRDVLTG-LGIGFDAEA---GSLGA----EQCRRLLDDAGLREAALRVRQEMSEM----PPP-AETAAXLVAL 398 (400)
T ss_dssp HHHHHHHH-HTSEEECCT---TTCSH----HHHHHHHHCHHHHHHHHHHHHHHHTS----CCH-HHHHHHHHHH
T ss_pred HHHHHHHH-CCCEEEcCC---CCchH----HHHHHHHcCHHHHHHHHHHHHHHHcC----CCH-HHHHHHHHHh
Confidence 99999999 799999974 44554 57888999999999999999999874 333 3444555554
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.9e-43 Score=349.71 Aligned_cols=372 Identities=16% Similarity=0.152 Sum_probs=254.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC-CC-cc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE-DD-RK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~-~~ 95 (471)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.+. |++|+.++...... .. ..
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~--------------g~~~~~i~~~~~~~~~~~~~ 66 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV--------------GVPHVPVGPSARAPIQRAKP 66 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT--------------TCCEEECCC-------CCSC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc--------------CCeeeeCCCCHHHHhhcccc
Confidence 5999999999999999999999999999999999999987777665 88999888653211 00 11
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECC-Ccch--HHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV-TFGW--ALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
.....+..+. .....+.++.+.... .+||+||+|. +..+ +..+|+++|||++.+++++....
T Consensus 67 ~~~~~~~~~~---~~~~~~~~~~l~~~~--~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~---------- 131 (415)
T 1iir_A 67 LTAEDVRRFT---TEAIATQFDEIPAAA--EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP---------- 131 (415)
T ss_dssp CCHHHHHHHH---HHHHHHHHHHHHHHT--TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC----------
T ss_pred cchHHHHHHH---HHHHHHHHHHHHHHh--cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC----------
Confidence 1111121221 122333444443212 7999999998 5668 89999999999999987664310
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCC----chhHHH----HHHHHHHhhh------------ccCc
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPS----LQTLMF----QYINVIRQNI------------EASD 232 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~~~------------~~~~ 232 (471)
..+. |... ... .++.....+.. ...... ..+.+..... ...
T Consensus 132 -~~~~---------------p~~~-~~~-~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~- 192 (415)
T 1iir_A 132 -SPYY---------------PPPP-LGE-PSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD- 192 (415)
T ss_dssp -CSSS---------------CCCC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-
T ss_pred -Cccc---------------CCcc-CCc-cccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-
Confidence 0000 0000 000 00000000000 000000 0111111111 122
Q ss_pred EEEEcchhhhch-hhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHH
Q 012083 233 RILCTWFHELAP-SANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGL 311 (471)
Q Consensus 233 ~~l~~s~~~l~~-~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al 311 (471)
.+++++++.|++ + .+.. ++++|||+..+.. ++.+.++.+|++..+ ++|||++||+. ...+.+..+++++
T Consensus 193 ~~l~~~~~~l~~~~-~~~~-~~~~vG~~~~~~~-----~~~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~~~~~al 262 (415)
T 1iir_A 193 HPWVAADPVLAPLQ-PTDL-DAVQTGAWILPDE-----RPLSPELAAFLDAGP--PPVYLGFGSLG-APADAVRVAIDAI 262 (415)
T ss_dssp SCEECSCTTTSCCC-CCSS-CCEECCCCCCCCC-----CCCCHHHHHHHHTSS--CCEEEECC----CCHHHHHHHHHHH
T ss_pred CEEEeeChhhcCCC-cccC-CeEeeCCCccCcc-----cCCCHHHHHHHhhCC--CeEEEeCCCCC-CcHHHHHHHHHHH
Confidence 689999999987 4 2222 8999999987532 344567789997653 59999999987 6677788899999
Q ss_pred HhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccc
Q 012083 312 ELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWG 391 (471)
Q Consensus 312 ~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~ 391 (471)
++.+.+++|+++... .. . ...++|+++++|+||.++| +++++||||||+||++||+++|+|+|++|..
T Consensus 263 ~~~~~~~v~~~g~~~----~~-~-----~~~~~~v~~~~~~~~~~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~ 330 (415)
T 1iir_A 263 RAHGRRVILSRGWAD----LV-L-----PDDGADCFAIGEVNHQVLF--GRVAAVIHHGGAGTTHVAARAGAPQILLPQM 330 (415)
T ss_dssp HHTTCCEEECTTCTT----CC-C-----SSCGGGEEECSSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred HHCCCeEEEEeCCCc----cc-c-----cCCCCCEEEeCcCChHHHH--hhCCEEEeCCChhHHHHHHHcCCCEEECCCC
Confidence 999999999887541 11 1 1235788999999999999 5566699999999999999999999999999
Q ss_pred cchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012083 392 HDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469 (471)
Q Consensus 392 ~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 469 (471)
.||..||.++++ +|+|+.++. ..++.++|.++|+++ +|++|++++++++++++. ..+...+.+.|+++
T Consensus 331 ~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~ 398 (415)
T 1iir_A 331 ADQPYYAGRVAE-LGVGVAHDG---PIPTFDSLSAALATA-LTPETHARATAVAGTIRT-----DGAAVAARLLLDAV 398 (415)
T ss_dssp TTHHHHHHHHHH-HTSEEECSS---SSCCHHHHHHHHHHH-TSHHHHHHHHHHHHHSCS-----CHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHH-CCCcccCCc---CCCCHHHHHHHHHHH-cCHHHHHHHHHHHHHHhh-----cChHHHHHHHHHHH
Confidence 999999999999 799999975 668999999999999 999999999999998854 23344555555544
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=3.1e-42 Score=342.54 Aligned_cols=377 Identities=13% Similarity=0.172 Sum_probs=268.0
Q ss_pred cccccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCC
Q 012083 9 ESESLNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGL 88 (471)
Q Consensus 9 ~~~~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 88 (471)
+.+.| |||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++. |+.+..++...
T Consensus 16 ~~~~m----~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~--------------G~~~~~~~~~~ 77 (415)
T 3rsc_A 16 EGRHM----AHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA--------------GATVVPYQSEI 77 (415)
T ss_dssp ---CC----CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT--------------TCEEEECCCST
T ss_pred CcccC----CEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc--------------CCEEEeccccc
Confidence 55557 9999999999999999999999999999999999999998888776 89999988655
Q ss_pred CCCCCc-----ccHHHHHHH-HHhhccHHHHHHHHHHhcccCCCCeeEEEEC-CCcchHHHHHHHcCCceEEEeCchHHH
Q 012083 89 EPEDDR-----KDEAKMTRS-ISKVMPGYLEELIQKINQQEEDEKITCVIAD-VTFGWALQVAAKLELKKASIYTSAPGI 161 (471)
Q Consensus 89 ~~~~~~-----~~~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~ 161 (471)
+..... ......+.. +.......++++.+.+++ ++||+||+| ....++..+|+.+|||++.+.+.....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~ 153 (415)
T 3rsc_A 78 IDADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEALDG----DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASN 153 (415)
T ss_dssp TTCCHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSS----SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cccccchhhccccHHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEECchhhhHHHHHHHHhCCCEEEEEeccccc
Confidence 433110 011111222 233333344555555555 899999999 777789999999999999987544310
Q ss_pred HHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhh----------hcc-
Q 012083 162 LAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQN----------IEA- 230 (471)
Q Consensus 162 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~- 230 (471)
... ...+..... .....+. ....+.+.+.+.... ...
T Consensus 154 ~~~-~~~~~~~~~----------------~~~~~p~---------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 201 (415)
T 3rsc_A 154 EHY-SFSQDMVTL----------------AGTIDPL---------------DLPVFRDTLRDLLAEHGLSRSVVDCWNHV 201 (415)
T ss_dssp SSC-CHHHHHHHH----------------HTCCCGG---------------GCHHHHHHHHHHHHHTTCCCCHHHHHTCC
T ss_pred Ccc-ccccccccc----------------cccCChh---------------hHHHHHHHHHHHHHHcCCCCChhhhhcCC
Confidence 000 000000000 0000000 000111111111111 122
Q ss_pred CcEEEEcchhhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHH
Q 012083 231 SDRILCTWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALG 310 (471)
Q Consensus 231 ~~~~l~~s~~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~a 310 (471)
++..++.+.+.++++...++.+++++||...+.. +..+|....+++++||+++||......+.+..++++
T Consensus 202 ~~~~l~~~~~~~~~~~~~~~~~~~~vGp~~~~~~----------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~a 271 (415)
T 3rsc_A 202 EQLNLVFVPKAFQIAGDTFDDRFVFVGPCFDDRR----------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARA 271 (415)
T ss_dssp CSEEEESSCTTTSTTGGGCCTTEEECCCCCCCCG----------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHH
T ss_pred CCeEEEEcCcccCCCcccCCCceEEeCCCCCCcc----------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHH
Confidence 2788889988888875556778999998875431 122555555567899999999977777888899999
Q ss_pred HHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeeccc
Q 012083 311 LELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPW 390 (471)
Q Consensus 311 l~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~ 390 (471)
+++.+.+++|.++... ..+. .+..++|+++.+|+|+.++|+++++ ||||||+||++|++++|+|+|++|.
T Consensus 272 l~~~~~~~v~~~g~~~-------~~~~-l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~ 341 (415)
T 3rsc_A 272 FDGQPWHVVMTLGGQV-------DPAA-LGDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQ 341 (415)
T ss_dssp HTTSSCEEEEECTTTS-------CGGG-GCCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCC
T ss_pred HhcCCcEEEEEeCCCC-------ChHH-hcCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCC
Confidence 9988899999887541 0111 1234688999999999999977666 9999999999999999999999999
Q ss_pred ccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH
Q 012083 391 GHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIK 467 (471)
Q Consensus 391 ~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 467 (471)
..||..||.++++ .|+|..+.. ..++.++|.++|+++|+|++++++++++++.+++ +++....++.+.+
T Consensus 342 ~~~q~~~a~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 410 (415)
T 3rsc_A 342 SFDVQPMARRVDQ-LGLGAVLPG---EKADGDTLLAAVGAVAADPALLARVEAMRGHVRR----AGGAARAADAVEA 410 (415)
T ss_dssp SGGGHHHHHHHHH-HTCEEECCG---GGCCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH----SCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHH-cCCEEEccc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHH
Confidence 9999999999999 699999975 6789999999999999999999999999999987 3444444444433
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.6e-42 Score=342.05 Aligned_cols=357 Identities=16% Similarity=0.079 Sum_probs=251.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC-CC--c
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE-DD--R 94 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~--~ 94 (471)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.+. |++|++++...... .. .
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~--------------g~~~~~~~~~~~~~~~~~~~ 66 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV--------------GVPHVPVGLPQHMMLQEGMP 66 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH--------------TCCEEECSCCGGGCCCTTSC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc--------------CCeeeecCCCHHHHHhhccc
Confidence 5999999999999999999999999999999999999888877776 88898887643211 00 0
Q ss_pred ccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECC-Ccch--HHHHHHHcCCceEEEeCchHHHHHHHhchhhh
Q 012083 95 KDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV-TFGW--ALQVAAKLELKKASIYTSAPGILAMIMNIPKF 171 (471)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~ 171 (471)
......+..+.. ....++++.+.... .+||+||+|. +..+ +..+|+.+|||++.+++++....
T Consensus 67 ~~~~~~~~~~~~---~~~~~~~~~l~~~~--~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~--------- 132 (416)
T 1rrv_A 67 PPPPEEEQRLAA---MTVEMQFDAVPGAA--EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA--------- 132 (416)
T ss_dssp CCCHHHHHHHHH---HHHHHHHHHHHHHT--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC---------
T ss_pred cchhHHHHHHHH---HHHHHHHHHHHHHh--cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC---------
Confidence 111111222211 22344444444222 7999999997 4556 88999999999999887653210
Q ss_pred hhhCCCCCCcccccccccccCC-CCCCCCccccCCCCCCCCCc----hhH----HHHHHHHHHhh------------hcc
Q 012083 172 IEAGIISSDGIVIKNEKIELSP-YLPAASPAEFLWNCPGNPSL----QTL----MFQYINVIRQN------------IEA 230 (471)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~------------~~~ 230 (471)
.. .+| ... +. +.+....+... ... +.....+.... ...
T Consensus 133 --~~---------------~~p~~~~-~~---~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 191 (416)
T 1rrv_A 133 --SP---------------HLPPAYD-EP---TTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHG 191 (416)
T ss_dssp --CS---------------SSCCCBC-SC---CCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTC
T ss_pred --Cc---------------ccCCCCC-CC---CCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccC
Confidence 00 011 000 00 00000000000 000 00011111111 122
Q ss_pred CcEEEEcchhhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCcccc-CCHHHHHHHHH
Q 012083 231 SDRILCTWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISK-LSQQQFNELAL 309 (471)
Q Consensus 231 ~~~~l~~s~~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~~~~ 309 (471)
. .++++++++|+++... . ++++|||+..+.. ++.+.++.+|++..+ ++|||++||+.. ...+.+..+++
T Consensus 192 ~-~~l~~~~~~l~~~~~~-~-~~~~vG~~~~~~~-----~~~~~~~~~~l~~~~--~~v~v~~Gs~~~~~~~~~~~~~~~ 261 (416)
T 1rrv_A 192 E-RPLLAADPVLAPLQPD-V-DAVQTGAWLLSDE-----RPLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKVAVE 261 (416)
T ss_dssp S-SCEECSCTTTSCCCSS-C-CCEECCCCCCCCC-----CCCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHHHHH
T ss_pred C-CeEEccCccccCCCCC-C-CeeeECCCccCcc-----CCCCHHHHHHHhcCC--CeEEEecCCCCccChHHHHHHHHH
Confidence 3 6899999999875222 2 8999999987632 234567789987653 599999999754 34566788999
Q ss_pred HHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecc
Q 012083 310 GLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWP 389 (471)
Q Consensus 310 al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P 389 (471)
++++.+.+++|+++.. ... + +..++|+++++|+||.++| +++++||||||+||++||+++|||+|++|
T Consensus 262 al~~~~~~~v~~~g~~----~~~-~-----~~~~~~v~~~~~~~~~~ll--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p 329 (416)
T 1rrv_A 262 AIRAQGRRVILSRGWT----ELV-L-----PDDRDDCFAIDEVNFQALF--RRVAAVIHHGSAGTEHVATRAGVPQLVIP 329 (416)
T ss_dssp HHHHTTCCEEEECTTT----TCC-C-----SCCCTTEEEESSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred HHHHCCCeEEEEeCCc----ccc-c-----cCCCCCEEEeccCChHHHh--ccCCEEEecCChhHHHHHHHcCCCEEEcc
Confidence 9999999999998764 111 1 1246789999999999999 55556999999999999999999999999
Q ss_pred cccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Q 012083 390 WGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQK 450 (471)
Q Consensus 390 ~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 450 (471)
+..||..||.++++ +|+|+.+.. ..++.++|.++|+++ +|++|+++++++++++++
T Consensus 330 ~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 330 RNTDQPYFAGRVAA-LGIGVAHDG---PTPTFESLSAALTTV-LAPETRARAEAVAGMVLT 385 (416)
T ss_dssp CSBTHHHHHHHHHH-HTSEEECSS---SCCCHHHHHHHHHHH-TSHHHHHHHHHHTTTCCC
T ss_pred CCCCcHHHHHHHHH-CCCccCCCC---CCCCHHHHHHHHHHh-hCHHHHHHHHHHHHHHhh
Confidence 99999999999999 799999974 568999999999999 999999999999998864
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=1e-40 Score=330.16 Aligned_cols=370 Identities=16% Similarity=0.221 Sum_probs=265.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC-----
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED----- 92 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----- 92 (471)
+||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++. |+.+..++...+...
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~--------------G~~~~~~~~~~~~~~~~~~~ 70 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA--------------GAEVVLYKSEFDTFHVPEVV 70 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT--------------TCEEEECCCGGGTSSSSSSS
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc--------------CCEEEecccccccccccccc
Confidence 6999999999999999999999999999999999998888888766 899998875433221
Q ss_pred CcccHHHHHHH-HHhhccHHHHHHHHHHhcccCCCCeeEEEEC-CCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhh
Q 012083 93 DRKDEAKMTRS-ISKVMPGYLEELIQKINQQEEDEKITCVIAD-VTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPK 170 (471)
Q Consensus 93 ~~~~~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~ 170 (471)
...+....+.. +.......+.++.+.+++ ++||+||+| ....++..+|+.+|||++.+.+........ ...+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~-~~~~~ 145 (402)
T 3ia7_A 71 KQEDAETQLHLVYVRENVAILRAAEEALGD----NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHY-SLFKE 145 (402)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHTT----CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTB-CHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccc-ccccc
Confidence 12233333333 444444445555555555 899999999 777789999999999999987544321000 00000
Q ss_pred hhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhh----------hcc-CcEEEEcch
Q 012083 171 FIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQN----------IEA-SDRILCTWF 239 (471)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~l~~s~ 239 (471)
..... ....+. ....+...+.+.... ... .+..++.+.
T Consensus 146 ~~~~~----------------~~~~~~---------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~ 194 (402)
T 3ia7_A 146 LWKSN----------------GQRHPA---------------DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLP 194 (402)
T ss_dssp HHHHH----------------TCCCGG---------------GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSC
T ss_pred ccccc----------------cccChh---------------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcC
Confidence 00000 000000 000011111111111 112 277888888
Q ss_pred hhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEE
Q 012083 240 HELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFL 319 (471)
Q Consensus 240 ~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i 319 (471)
++++++...+..+++++||...... +...|....+++++||+++||......+.+..+++++++.+.+++
T Consensus 195 ~~~~~~~~~~~~~~~~vGp~~~~~~----------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (402)
T 3ia7_A 195 KSFQPFAETFDERFAFVGPTLTGRD----------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVV 264 (402)
T ss_dssp GGGSTTGGGCCTTEEECCCCCCC--------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEE
T ss_pred hHhCCccccCCCCeEEeCCCCCCcc----------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEE
Confidence 8888774555778999998865432 112455555567899999999987777788999999998888899
Q ss_pred EEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeeccc-ccchhhhH
Q 012083 320 CGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPW-GHDHLYIK 398 (471)
Q Consensus 320 ~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~-~~DQ~~na 398 (471)
|.+++.. ..+. .+..++|+++.+|+|+.++|+++++ ||||||+||++|++++|+|+|++|. ..||..||
T Consensus 265 ~~~g~~~-------~~~~-~~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a 334 (402)
T 3ia7_A 265 MAIGGFL-------DPAV-LGPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSA 334 (402)
T ss_dssp EECCTTS-------CGGG-GCSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHH
T ss_pred EEeCCcC-------Chhh-hCCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHH
Confidence 8887541 1111 1224789999999999999977665 9999999999999999999999999 99999999
Q ss_pred HHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHH
Q 012083 399 SCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYF 465 (471)
Q Consensus 399 ~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~ 465 (471)
.++++ .|+|..+.. ..++.+.|.++++++|+|++++++++++++++.+ +++.....+.+
T Consensus 335 ~~~~~-~g~g~~~~~---~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i 393 (402)
T 3ia7_A 335 ERVIE-LGLGSVLRP---DQLEPASIREAVERLAADSAVRERVRRMQRDILS----SGGPARAADEV 393 (402)
T ss_dssp HHHHH-TTSEEECCG---GGCSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCHHHHHHHHH
T ss_pred HHHHH-cCCEEEccC---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh----CChHHHHHHHH
Confidence 99999 699999975 6789999999999999999999999999999876 34444444433
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=7.6e-41 Score=330.84 Aligned_cols=350 Identities=17% Similarity=0.151 Sum_probs=246.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC--CCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE--DDRK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~ 95 (471)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++. |+.|.+++...... ....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~--------------g~~~~~l~~~~~~~~~~~~~ 66 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV--------------GVPMVPVGRAVRAGAREPGE 66 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT--------------TCCEEECSSCSSGGGSCTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc--------------CCceeecCCCHHHHhccccC
Confidence 5999999999999999999999999999999999999998888877 88999887543211 0000
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchH---HHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWA---LQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
........+... +.+.++.+.... .+||+||+|.....+ ..+|+.+|||++.+..++.......++ ...
T Consensus 67 ~~~~~~~~~~~~----~~~~~~~l~~~~--~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~--~~~ 138 (404)
T 3h4t_A 67 LPPGAAEVVTEV----VAEWFDKVPAAI--EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQ--AER 138 (404)
T ss_dssp CCTTCGGGHHHH----HHHHHHHHHHHH--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCH--HHH
T ss_pred CHHHHHHHHHHH----HHHHHHHHHHHh--cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHH--HHH
Confidence 000111111111 222222222222 479999998665533 789999999999988776531000000 000
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhh-----------ccCcEEEEcchhh
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNI-----------EASDRILCTWFHE 241 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~s~~~ 241 (471)
. +. .....+.+.+.+.+....+ ...+..+++..+.
T Consensus 139 ~-----------------------------~~-----~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~ 184 (404)
T 3h4t_A 139 D-----------------------------MY-----NQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPV 184 (404)
T ss_dssp H-----------------------------HH-----HHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTT
T ss_pred H-----------------------------HH-----HHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcc
Confidence 0 00 0000000000011100000 0123346677777
Q ss_pred hchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEE
Q 012083 242 LAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCG 321 (471)
Q Consensus 242 l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 321 (471)
+.+. .++.++++++|++..+.. .+.+.++.+|++.. +++|||++||+.. ..+.+..+++++++.+.++||+
T Consensus 185 l~p~-~~~~~~~~~~G~~~~~~~-----~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~ 255 (404)
T 3h4t_A 185 LSPL-RPTDLGTVQTGAWILPDQ-----RPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLS 255 (404)
T ss_dssp TSCC-CTTCCSCCBCCCCCCCCC-----CCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEE
T ss_pred eeCC-CCCCCCeEEeCccccCCC-----CCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEE
Confidence 7665 456778999998865532 24456777888754 4699999999876 6778889999999999999999
Q ss_pred EcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHH
Q 012083 322 VRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCI 401 (471)
Q Consensus 322 ~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v 401 (471)
++.. ....+ ..++|+++++|+||.++|.+ +++||||||+||+.|++++|+|+|++|+..||+.||.++
T Consensus 256 ~g~~----~~~~~------~~~~~v~~~~~~~~~~ll~~--~d~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~ 323 (404)
T 3h4t_A 256 SGWA----GLGRI------DEGDDCLVVGEVNHQVLFGR--VAAVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRV 323 (404)
T ss_dssp CTTT----TCCCS------SCCTTEEEESSCCHHHHGGG--SSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH
T ss_pred eCCc----ccccc------cCCCCEEEecCCCHHHHHhh--CcEEEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHH
Confidence 8754 11111 12688999999999999955 555999999999999999999999999999999999999
Q ss_pred HhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHH
Q 012083 402 CDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQ 449 (471)
Q Consensus 402 ~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~ 449 (471)
++ .|+|..+.. ..++.++|.++|+++|+ ++|+++++++++.++
T Consensus 324 ~~-~G~g~~l~~---~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 324 AD-LGVGVAHDG---PTPTVESLSAALATALT-PGIRARAAAVAGTIR 366 (404)
T ss_dssp HH-HTSEEECSS---SSCCHHHHHHHHHHHTS-HHHHHHHHHHHTTCC
T ss_pred HH-CCCEeccCc---CCCCHHHHHHHHHHHhC-HHHHHHHHHHHHHHh
Confidence 99 799999975 67899999999999999 999999999998874
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=2.8e-40 Score=330.86 Aligned_cols=354 Identities=16% Similarity=0.151 Sum_probs=240.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC-----
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED----- 92 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----- 92 (471)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++. |++|++++...+..+
T Consensus 21 mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~--------------G~~~~~i~~~~~~~~~~~~~ 86 (441)
T 2yjn_A 21 MRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA--------------GLTAVPVGTDVDLVDFMTHA 86 (441)
T ss_dssp CEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT--------------TCCEEECSCCCCHHHHHHHT
T ss_pred cEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC--------------CCceeecCCccchHHHhhhh
Confidence 8999999999999999999999999999999999999887777665 899999876531000
Q ss_pred -----------C-----cc--cHH---HHHHHHHhh----c-cH-HHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHH
Q 012083 93 -----------D-----RK--DEA---KMTRSISKV----M-PG-YLEELIQKINQQEEDEKITCVIADVTFGWALQVAA 145 (471)
Q Consensus 93 -----------~-----~~--~~~---~~~~~~~~~----~-~~-~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~ 145 (471)
+ .. ... .....+... . .. .++++++.+++ ++||+||+|..+.++..+|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~pDlVv~d~~~~~~~~aA~ 162 (441)
T 2yjn_A 87 GHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK----WRPDLVIWEPLTFAAPIAAA 162 (441)
T ss_dssp THHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH----HCCSEEEECTTCTHHHHHHH
T ss_pred hcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh----cCCCEEEecCcchhHHHHHH
Confidence 0 10 110 111112111 1 12 56666665555 89999999998788999999
Q ss_pred HcCCceEEEeCchHHHHHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHH
Q 012083 146 KLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIR 225 (471)
Q Consensus 146 ~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (471)
.+|||++.+...+............ ..+ ..+.. .. ...+.+.+.+..
T Consensus 163 ~lgiP~v~~~~~~~~~~~~~~~~~~--~~~---------------~~~~~-----------~~-----~~~~~~~l~~~~ 209 (441)
T 2yjn_A 163 VTGTPHARLLWGPDITTRARQNFLG--LLP---------------DQPEE-----------HR-----EDPLAEWLTWTL 209 (441)
T ss_dssp HHTCCEEEECSSCCHHHHHHHHHHH--HGG---------------GSCTT-----------TC-----CCHHHHHHHHHH
T ss_pred HcCCCEEEEecCCCcchhhhhhhhh--hcc---------------ccccc-----------cc-----cchHHHHHHHHH
Confidence 9999999996554332111100000 000 00000 00 011112222222
Q ss_pred hhhc---------cCcEEEEcchhhhchhhhhhC-CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCc
Q 012083 226 QNIE---------ASDRILCTWFHELAPSANKIL-PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGS 295 (471)
Q Consensus 226 ~~~~---------~~~~~l~~s~~~l~~~~~~~~-~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS 295 (471)
..+. ..+.++..+.+.++++ ..++ ..+++++ .. .+.++.+|++..+++++|||++||
T Consensus 210 ~~~g~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~---~~---------~~~~~~~~l~~~~~~~~v~v~~Gs 276 (441)
T 2yjn_A 210 EKYGGPAFDEEVVVGQWTIDPAPAAIRLD-TGLKTVGMRYVD---YN---------GPSVVPEWLHDEPERRRVCLTLGI 276 (441)
T ss_dssp HHTTCCCCCGGGTSCSSEEECSCGGGSCC-CCCCEEECCCCC---CC---------SSCCCCGGGSSCCSSCEEEEEC--
T ss_pred HHcCCCCCCccccCCCeEEEecCccccCC-CCCCCCceeeeC---CC---------CCcccchHhhcCCCCCEEEEECCC
Confidence 2111 2455666666666542 2221 1222221 11 122345888876667899999999
Q ss_pred cccC---CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCc
Q 012083 296 ISKL---SQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGW 372 (471)
Q Consensus 296 ~~~~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~ 372 (471)
+... ..+.+..+++++++.+.+++|++++. ....+. ..++|+++++|+||.++|+ .+++||||||+
T Consensus 277 ~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~----~~~~l~-----~~~~~v~~~~~~~~~~ll~--~ad~~V~~~G~ 345 (441)
T 2yjn_A 277 SSRENSIGQVSIEELLGAVGDVDAEIIATFDAQ----QLEGVA-----NIPDNVRTVGFVPMHALLP--TCAATVHHGGP 345 (441)
T ss_dssp --------CCSTTTTHHHHHTSSSEEEECCCTT----TTSSCS-----SCCSSEEECCSCCHHHHGG--GCSEEEECCCH
T ss_pred CcccccChHHHHHHHHHHHHcCCCEEEEEECCc----chhhhc-----cCCCCEEEecCCCHHHHHh--hCCEEEECCCH
Confidence 8653 33456778899998899999988754 111221 2367899999999999995 45559999999
Q ss_pred chhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Q 012083 373 NSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQK 450 (471)
Q Consensus 373 ~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 450 (471)
||++|++++|+|+|++|+..||..||.++++ .|+|+.+.. ..++.++|.++|+++|+|++++++++++++++++
T Consensus 346 ~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 419 (441)
T 2yjn_A 346 GSWHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPV---PELTPDQLRESVKRVLDDPAHRAGAARMRDDMLA 419 (441)
T ss_dssp HHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCT---TTCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEccc---ccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999 699999975 6789999999999999999999999999999876
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.5e-39 Score=322.07 Aligned_cols=360 Identities=14% Similarity=0.174 Sum_probs=253.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCC----
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDD---- 93 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---- 93 (471)
|||+|++.++.||++|+++|+++|+++||+|+++++....+.+.+. |++++.++...+....
T Consensus 8 ~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~--------------g~~~~~~~~~~~~~~~~~~~ 73 (430)
T 2iyf_A 8 AHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT--------------GPRPVLYHSTLPGPDADPEA 73 (430)
T ss_dssp CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT--------------SCEEEECCCCSCCTTSCGGG
T ss_pred ceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC--------------CCEEEEcCCcCccccccccc
Confidence 7999999999999999999999999999999999999887666554 8899988865432211
Q ss_pred -cccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 94 -RKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 94 -~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
..+....+..+.......+..+.+.+++ .+||+||+|....++..+|+.+|||++.+++........ ...+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~-~~~~~-- 146 (430)
T 2iyf_A 74 WGSTLLDNVEPFLNDAIQALPQLADAYAD----DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGY-EEEVA-- 146 (430)
T ss_dssp GCSSHHHHHHHHHHHHHHHHHHHHHHHTT----SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTH-HHHTH--
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccc-ccccc--
Confidence 1233333333333233334455555544 899999999877788999999999999998654310000 00000
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHh----------hhccCcEEEEcchhhh
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQ----------NIEASDRILCTWFHEL 242 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~s~~~l 242 (471)
.. .. ......++ ...+...+.+... ....++.+++++.+.+
T Consensus 147 -~~------~~---~~~~~~~~-------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~ 197 (430)
T 2iyf_A 147 -EP------MW---REPRQTER-------------------GRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKAL 197 (430)
T ss_dssp -HH------HH---HHHHHSHH-------------------HHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGG
T ss_pred -cc------hh---hhhccchH-------------------HHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHh
Confidence 00 00 00000000 0000001111111 1125788999999999
Q ss_pred chhhhhhCCC-cceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhC-CCCEEE
Q 012083 243 APSANKILPS-IIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA-GQPFLC 320 (471)
Q Consensus 243 ~~~~~~~~~~-~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~ 320 (471)
+++...++++ +++|||...... . ..+|....+++++||+++||+.....+.+..+++++++. +.+++|
T Consensus 198 ~~~~~~~~~~~v~~vG~~~~~~~---~-------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~ 267 (430)
T 2iyf_A 198 QPHADRVDEDVYTFVGACQGDRA---E-------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVL 267 (430)
T ss_dssp STTGGGSCTTTEEECCCCC---------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEE
T ss_pred CCCcccCCCccEEEeCCcCCCCC---C-------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEE
Confidence 8764455667 999998654321 0 124555445577999999998855677788899999885 778888
Q ss_pred EEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHH
Q 012083 321 GVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSC 400 (471)
Q Consensus 321 ~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 400 (471)
.++... ..+.+ +..++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..||.+
T Consensus 268 ~~G~~~-------~~~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~ 337 (430)
T 2iyf_A 268 QIGRKV-------TPAEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADM 337 (430)
T ss_dssp ECC----------CGGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHH
T ss_pred EeCCCC-------ChHHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHH
Confidence 887541 01111 124678999999999999988777 99999999999999999999999999999999999
Q ss_pred HHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Q 012083 401 ICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKS 451 (471)
Q Consensus 401 v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~ 451 (471)
+++ .|+|+.+.. ..++.++|.++|+++++|++++++++++++++++.
T Consensus 338 ~~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~ 384 (430)
T 2iyf_A 338 LQG-LGVARKLAT---EEATADLLRETALALVDDPEVARRLRRIQAEMAQE 384 (430)
T ss_dssp HHH-TTSEEECCC---C-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHH-cCCEEEcCC---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence 999 699999974 56799999999999999999999999999998764
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=5.3e-39 Score=315.92 Aligned_cols=348 Identities=15% Similarity=0.116 Sum_probs=247.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCC--------
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLE-------- 89 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------- 89 (471)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... |+.++.++....
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~--------------g~~~~~~~~~~~~~~~~~~~ 66 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV--------------GLPAVATTDLPIRHFITTDR 66 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT--------------TCCEEESCSSCHHHHHHBCT
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC--------------CCEEEEeCCcchHHHHhhhc
Confidence 5999999999999999999999999999999999998877666655 888888875420
Q ss_pred ----CCCCcc-cHHHHH-HH-HHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHH
Q 012083 90 ----PEDDRK-DEAKMT-RS-ISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGIL 162 (471)
Q Consensus 90 ----~~~~~~-~~~~~~-~~-~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 162 (471)
...... .....+ .. +.......++++.+.+++ .+||+||+|....++..+|+.+|||++.++..+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-- 140 (384)
T 2p6p_A 67 EGRPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA----WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-- 140 (384)
T ss_dssp TSCBCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC--
T ss_pred ccCccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc----cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc--
Confidence 000010 111111 21 111222334445444444 89999999988778889999999999987632110
Q ss_pred HHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhh-----ccCcEEEEc
Q 012083 163 AMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNI-----EASDRILCT 237 (471)
Q Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~ 237 (471)
..++ ...+...+.+..... ..++.++++
T Consensus 141 -----------------------------~~~~------------------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 173 (384)
T 2p6p_A 141 -----------------------------ADGI------------------HPGADAELRPELSELGLERLPAPDLFIDI 173 (384)
T ss_dssp -----------------------------CTTT------------------HHHHHHHTHHHHHHTTCSSCCCCSEEEEC
T ss_pred -----------------------------cchh------------------hHHHHHHHHHHHHHcCCCCCCCCCeEEEE
Confidence 0000 000111111111111 126789999
Q ss_pred chhhhchhhhhhC-CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccC-----CHHHHHHHHHHH
Q 012083 238 WFHELAPSANKIL-PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKL-----SQQQFNELALGL 311 (471)
Q Consensus 238 s~~~l~~~~~~~~-~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~-----~~~~~~~~~~al 311 (471)
+.+.++++ .+++ .++.+++. . .+.++.+|++..+++++||+++||+... +.+.+..+++++
T Consensus 174 ~~~~~~~~-~~~~~~~~~~~~~---~---------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al 240 (384)
T 2p6p_A 174 CPPSLRPA-NAAPARMMRHVAT---S---------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDL 240 (384)
T ss_dssp SCGGGSCT-TSCCCEECCCCCC---C---------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHH
T ss_pred CCHHHCCC-CCCCCCceEecCC---C---------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHH
Confidence 99988765 2322 23444421 1 1123457887655567999999998654 456788899999
Q ss_pred HhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccc
Q 012083 312 ELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWG 391 (471)
Q Consensus 312 ~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~ 391 (471)
++.+.+++|++++. ..+.+ +..++|+.+ +|+||.++|++++ +||||||+||++||+++|+|+|++|..
T Consensus 241 ~~~~~~~~~~~g~~--------~~~~l-~~~~~~v~~-~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~v~~p~~ 308 (384)
T 2p6p_A 241 VRWDVELIVAAPDT--------VAEAL-RAEVPQARV-GWTPLDVVAPTCD--LLVHHAGGVSTLTGLSAGVPQLLIPKG 308 (384)
T ss_dssp HTTTCEEEEECCHH--------HHHHH-HHHCTTSEE-ECCCHHHHGGGCS--EEEECSCTTHHHHHHHTTCCEEECCCS
T ss_pred hcCCcEEEEEeCCC--------CHHhh-CCCCCceEE-cCCCHHHHHhhCC--EEEeCCcHHHHHHHHHhCCCEEEccCc
Confidence 98999999987632 01111 235789999 9999999995555 599999999999999999999999999
Q ss_pred cchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHH
Q 012083 392 HDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYF 465 (471)
Q Consensus 392 ~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~ 465 (471)
.||..||.++++ .|+|+.+.. ..++.++|.++|+++|+|++++++++++++++++. .+..+.++.+
T Consensus 309 ~dq~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i 374 (384)
T 2p6p_A 309 SVLEAPARRVAD-YGAAIALLP---GEDSTEAIADSCQELQAKDTYARRAQDLSREISGM----PLPATVVTAL 374 (384)
T ss_dssp HHHHHHHHHHHH-HTSEEECCT---TCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTS----CCHHHHHHHH
T ss_pred ccchHHHHHHHH-CCCeEecCc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhC----CCHHHHHHHH
Confidence 999999999999 699999874 56799999999999999999999999999999873 4444444433
No 16
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=1.1e-37 Score=307.94 Aligned_cols=350 Identities=14% Similarity=0.135 Sum_probs=239.0
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCC-------
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLE------- 89 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------- 89 (471)
.|||+|++.++.||++|+++||++|+++||+|+++++ .+.+.++.. |+.+..++....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~--------------G~~~~~~~~~~~~~~~~~~ 84 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA--------------GLEVVDVAPDYSAVKVFEQ 84 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT--------------TCEEEESSTTCCHHHHHHH
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC--------------CCeeEecCCccCHHHHhhh
Confidence 3899999999999999999999999999999999999 777777765 899999875321
Q ss_pred ---------------CCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEE
Q 012083 90 ---------------PEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASI 154 (471)
Q Consensus 90 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~ 154 (471)
...........+..........+.+++++ ++||+||+|....++..+|+.+|||++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~pDlVv~d~~~~~~~~aA~~~giP~v~~ 157 (398)
T 3oti_A 85 VAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDD-------YRPDLVVYEQGATVGLLAADRAGVPAVQR 157 (398)
T ss_dssp HHHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHTCCEEEE
T ss_pred cccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCCEEEECchhhHHHHHHHHcCCCEEEE
Confidence 11111122222233333333334444444 89999999988888999999999999987
Q ss_pred eCchHHHHHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEE
Q 012083 155 YTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRI 234 (471)
Q Consensus 155 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (471)
........ . ..... ...+.....+..-.....+..
T Consensus 158 ~~~~~~~~-------------------------------~-----~~~~~---------~~~l~~~~~~~~~~~~~~~~~ 192 (398)
T 3oti_A 158 NQSAWRTR-------------------------------G-----MHRSI---------ASFLTDLMDKHQVSLPEPVAT 192 (398)
T ss_dssp CCTTCCCT-------------------------------T-----HHHHH---------HTTCHHHHHHTTCCCCCCSEE
T ss_pred eccCCCcc-------------------------------c-----hhhHH---------HHHHHHHHHHcCCCCCCCCeE
Confidence 53321000 0 00000 000011111100001233555
Q ss_pred EEcchhhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccC--CHHHHHHHHHHHH
Q 012083 235 LCTWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKL--SQQQFNELALGLE 312 (471)
Q Consensus 235 l~~s~~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~--~~~~~~~~~~al~ 312 (471)
+....+.+..+.......+.++. . .....+.+|+...+++++||+++||.... ..+.+..++++++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~ 260 (398)
T 3oti_A 193 IESFPPSLLLEAEPEGWFMRWVP-Y-----------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAG 260 (398)
T ss_dssp ECSSCGGGGTTSCCCSBCCCCCC-C-----------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHH
T ss_pred EEeCCHHHCCCCCCCCCCccccC-C-----------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHH
Confidence 65555555433101111112210 0 11223346776666678999999998442 5566888999999
Q ss_pred hCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeeccccc
Q 012083 313 LAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGH 392 (471)
Q Consensus 313 ~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 392 (471)
+.+.+++|+.++. . .+. .+..++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...
T Consensus 261 ~~~~~~v~~~g~~----~----~~~-l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~ 329 (398)
T 3oti_A 261 EVDADFVLALGDL----D----ISP-LGTLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPR 329 (398)
T ss_dssp TSSSEEEEECTTS----C----CGG-GCSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTT
T ss_pred cCCCEEEEEECCc----C----hhh-hccCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCc
Confidence 8999999988764 1 111 1134789999999999999977665 999999999999999999999999999
Q ss_pred chhhhH--HHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012083 393 DHLYIK--SCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469 (471)
Q Consensus 393 DQ~~na--~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 469 (471)
||..|| .++++ .|+|+.++. ...+.+.|. ++|+|++++++++++++++++. . +...+...++++
T Consensus 330 dq~~~a~~~~~~~-~g~g~~~~~---~~~~~~~l~----~ll~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~l~~l 395 (398)
T 3oti_A 330 DQFQHTAREAVSR-RGIGLVSTS---DKVDADLLR----RLIGDESLRTAAREVREEMVAL----P-TPAETVRRIVER 395 (398)
T ss_dssp CCSSCTTHHHHHH-HTSEEECCG---GGCCHHHHH----HHHHCHHHHHHHHHHHHHHHTS----C-CHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHH-CCCEEeeCC---CCCCHHHHH----HHHcCHHHHHHHHHHHHHHHhC----C-CHHHHHHHHHHH
Confidence 999999 99999 699999975 556777666 8899999999999999999763 3 344555555544
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=7.1e-38 Score=309.35 Aligned_cols=341 Identities=13% Similarity=0.070 Sum_probs=224.8
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCC------
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEP------ 90 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------ 90 (471)
+|||+|++.++.||++|+++|+++|+++||+|++++++.+.+.+.+. |+.+..++.....
T Consensus 15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~--------------G~~~~~~~~~~~~~~~~~~ 80 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA--------------GLPFAPTCPSLDMPEVLSW 80 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT--------------TCCEEEEESSCCHHHHHSB
T ss_pred ceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC--------------CCeeEecCCccchHhhhhh
Confidence 38999999999999999999999999999999999998888888776 7777777532110
Q ss_pred ---C---CCcccH----HHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHH
Q 012083 91 ---E---DDRKDE----AKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPG 160 (471)
Q Consensus 91 ---~---~~~~~~----~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 160 (471)
. ...... ......+.......++++.+.+++ ++||+||+|....++..+|+.+|||++.+......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~ 156 (398)
T 4fzr_A 81 DREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER----WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLAS 156 (398)
T ss_dssp CTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC
T ss_pred hccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh----CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCC
Confidence 0 000011 111112222222333444444444 89999999987778999999999999987654321
Q ss_pred HHHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhh-----hccCcEEE
Q 012083 161 ILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQN-----IEASDRIL 235 (471)
Q Consensus 161 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l 235 (471)
....... ....+.+.... ....+..+
T Consensus 157 ~~~~~~~-------------------------------------------------~~~~l~~~~~~~~~~~~~~~~~~~ 187 (398)
T 4fzr_A 157 PELIKSA-------------------------------------------------GVGELAPELAELGLTDFPDPLLSI 187 (398)
T ss_dssp CHHHHHH-------------------------------------------------HHHHTHHHHHTTTCSSCCCCSEEE
T ss_pred chhhhHH-------------------------------------------------HHHHHHHHHHHcCCCCCCCCCeEE
Confidence 1000000 00000000110 12335556
Q ss_pred EcchhhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccC--------CHHHHHHH
Q 012083 236 CTWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKL--------SQQQFNEL 307 (471)
Q Consensus 236 ~~s~~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~--------~~~~~~~~ 307 (471)
....+.++.........+.++++.. ...++.+|+...+++++||+++||.... ..+.+..+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~ 256 (398)
T 4fzr_A 188 DVCPPSMEAQPKPGTTKMRYVPYNG-----------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQAL 256 (398)
T ss_dssp ECSCGGGC----CCCEECCCCCCCC-----------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHH
T ss_pred EeCChhhCCCCCCCCCCeeeeCCCC-----------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHH
Confidence 6666666543111111122332110 1223346776656678999999998543 33457889
Q ss_pred HHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceee
Q 012083 308 ALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLC 387 (471)
Q Consensus 308 ~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~ 387 (471)
++++.+.+.+++|+.++. ....+ +..++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|+
T Consensus 257 ~~al~~~~~~~v~~~~~~----~~~~l-----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~ 325 (398)
T 4fzr_A 257 SQELPKLGFEVVVAVSDK----LAQTL-----QPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVS 325 (398)
T ss_dssp HHHGGGGTCEEEECCCC-----------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEE
T ss_pred HHHHHhCCCEEEEEeCCc----chhhh-----ccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEe
Confidence 999998899999888754 11111 234789999999999999987666 9999999999999999999999
Q ss_pred cccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Q 012083 388 WPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQK 450 (471)
Q Consensus 388 ~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 450 (471)
+|...||..||.++++ .|+|+.+.. ..++.++|.++|+++|+|++++++++++++++++
T Consensus 326 ~p~~~~q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 326 VPVIAEVWDSARLLHA-AGAGVEVPW---EQAGVESVLAACARIRDDSSYVGNARRLAAEMAT 384 (398)
T ss_dssp CCCSGGGHHHHHHHHH-TTSEEECC----------CHHHHHHHHHHCTHHHHHHHHHHHHHTT
T ss_pred cCCchhHHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHc
Confidence 9999999999999999 699999975 6678999999999999999999999999999876
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.1e-35 Score=293.05 Aligned_cols=355 Identities=12% Similarity=0.146 Sum_probs=238.9
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeC-CCCCCCC----
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPL-PDGLEPE---- 91 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~---- 91 (471)
+|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+... |+.+..+ +......
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~--------------g~~~~~~~~~~~~~~~~~~ 66 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA--------------GLTTAGIRGNDRTGDTGGT 66 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB--------------TCEEEEC------------
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC--------------CCceeeecCCccchhhhhh
Confidence 37999999999999999999999999999999999998887777766 7888877 3221100
Q ss_pred ------C------CcccHHHHHHHHHhhc----cHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEe
Q 012083 92 ------D------DRKDEAKMTRSISKVM----PGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIY 155 (471)
Q Consensus 92 ------~------~~~~~~~~~~~~~~~~----~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~ 155 (471)
. ........+......+ ...++++.+.+++ ++||+||+|...+++..+|+.+|||++.+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~ 142 (391)
T 3tsa_A 67 TQLRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA----WRPSVLLVDVCALIGRVLGGLLDLPVVLHR 142 (391)
T ss_dssp --CCSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEEETTCHHHHHHHHHTTCCEEEEC
T ss_pred hcccccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh----cCCCEEEeCcchhHHHHHHHHhCCCEEEEe
Confidence 0 0011112222221111 1114444444444 899999999877788889999999999975
Q ss_pred CchHHHHHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhh-----cc
Q 012083 156 TSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNI-----EA 230 (471)
Q Consensus 156 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 230 (471)
........ .........+.+....+ ..
T Consensus 143 ~~~~~~~~------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 174 (391)
T 3tsa_A 143 WGVDPTAG------------------------------------------------PFSDRAHELLDPVCRHHGLTGLPT 174 (391)
T ss_dssp CSCCCTTT------------------------------------------------HHHHHHHHHHHHHHHHTTSSSSCC
T ss_pred cCCccccc------------------------------------------------cccchHHHHHHHHHHHcCCCCCCC
Confidence 43211000 00001111111111111 22
Q ss_pred CcEEEEcchhhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCcccc--CC-HHHHHHH
Q 012083 231 SDRILCTWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISK--LS-QQQFNEL 307 (471)
Q Consensus 231 ~~~~l~~s~~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~--~~-~~~~~~~ 307 (471)
.+.++..+.++++.........++++ |. .....+..|+...+++++||+++||... .. .+.+..+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~-p~-----------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~ 242 (391)
T 3tsa_A 175 PELILDPCPPSLQASDAPQGAPVQYV-PY-----------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAV 242 (391)
T ss_dssp CSEEEECSCGGGSCTTSCCCEECCCC-CC-----------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHH
T ss_pred CceEEEecChhhcCCCCCccCCeeee-cC-----------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHH
Confidence 36667777777665421111123333 11 1122233677766667899999999833 33 6778888
Q ss_pred HHHHHhC-CCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCcee
Q 012083 308 ALGLELA-GQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFL 386 (471)
Q Consensus 308 ~~al~~~-~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l 386 (471)
+++ ++. +.+++|..++. ..+.+ +..++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|
T Consensus 243 ~~~-~~~p~~~~v~~~~~~----~~~~l-----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v 310 (391)
T 3tsa_A 243 AAA-TELPGVEAVIAVPPE----HRALL-----TDLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQL 310 (391)
T ss_dssp HHH-HTSTTEEEEEECCGG----GGGGC-----TTCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEE
T ss_pred HHh-ccCCCeEEEEEECCc----chhhc-----ccCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEE
Confidence 888 877 77888887653 11111 124688999999999999955555 999999999999999999999
Q ss_pred ecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHH
Q 012083 387 CWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFI 466 (471)
Q Consensus 387 ~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 466 (471)
++|...||..|+.++++ .|+|..+..+ ....+.+.|.++++++|+|++++++++++++++.+ +.+... +.+.+
T Consensus 311 ~~p~~~~q~~~a~~~~~-~g~g~~~~~~-~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~i 383 (391)
T 3tsa_A 311 VLPQYFDQFDYARNLAA-AGAGICLPDE-QAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITA----MPHPAA-LVRTL 383 (391)
T ss_dssp ECCCSTTHHHHHHHHHH-TTSEEECCSH-HHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHT----SCCHHH-HHHHH
T ss_pred ecCCcccHHHHHHHHHH-cCCEEecCcc-cccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHc----CCCHHH-HHHHH
Confidence 99999999999999999 6999999520 02378999999999999999999999999999876 344444 44444
Q ss_pred HH
Q 012083 467 KQ 468 (471)
Q Consensus 467 ~~ 468 (471)
++
T Consensus 384 ~~ 385 (391)
T 3tsa_A 384 EN 385 (391)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=1.7e-33 Score=279.26 Aligned_cols=345 Identities=17% Similarity=0.201 Sum_probs=239.4
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCC-------
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGL------- 88 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------- 88 (471)
++|||+|++.++.||++|+++|+++|+++||+|++++++.+.+.+.+. |+.+..++...
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~--------------g~~~~~~~~~~~~~~~~~ 84 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL--------------GFEPVATGMPVFDGFLAA 84 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT--------------TCEEEECCCCHHHHHHHH
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc--------------CCceeecCcccccchhhh
Confidence 458999999999999999999999999999999999998876666655 89998887410
Q ss_pred -----CCC-CCcccHH----HHHHHHHhh-ccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCc
Q 012083 89 -----EPE-DDRKDEA----KMTRSISKV-MPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTS 157 (471)
Q Consensus 89 -----~~~-~~~~~~~----~~~~~~~~~-~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~ 157 (471)
... ....... .....+... ....+.++.+.+++ .+||+||+|....++..+|+.+|||+|.+...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~ 160 (412)
T 3otg_A 85 LRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER----LRPDLVVQEISNYGAGLAALKAGIPTICHGVG 160 (412)
T ss_dssp HHHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH----HCCSEEEEETTCHHHHHHHHHHTCCEEEECCS
T ss_pred hhhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh----cCCCEEEECchhhHHHHHHHHcCCCEEEeccc
Confidence 000 0000011 111111111 11122333333333 89999999987778888999999999986543
Q ss_pred hHHHHHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhh----------
Q 012083 158 APGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQN---------- 227 (471)
Q Consensus 158 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 227 (471)
....... ...+.+.+.+....
T Consensus 161 ~~~~~~~-------------------------------------------------~~~~~~~~~~~~~~~g~~~~~~~~ 191 (412)
T 3otg_A 161 RDTPDDL-------------------------------------------------TRSIEEEVRGLAQRLGLDLPPGRI 191 (412)
T ss_dssp CCCCSHH-------------------------------------------------HHHHHHHHHHHHHHTTCCCCSSCC
T ss_pred ccCchhh-------------------------------------------------hHHHHHHHHHHHHHcCCCCCcccc
Confidence 2210000 00001111111111
Q ss_pred hccCcEEEEcchhhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhccc-ccCCCCCcEEEEecCccccCCHHHHHH
Q 012083 228 IEASDRILCTWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSW-LDKQPPGSVIYAAFGSISKLSQQQFNE 306 (471)
Q Consensus 228 ~~~~~~~l~~s~~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~vv~vs~GS~~~~~~~~~~~ 306 (471)
...++.++..+...++...........++- .... .......+| ....+++++|++++||......+.+..
T Consensus 192 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~ 262 (412)
T 3otg_A 192 DGFGNPFIDIFPPSLQEPEFRARPRRHELR---PVPF------AEQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRA 262 (412)
T ss_dssp GGGGCCEEECSCGGGSCHHHHTCTTEEECC---CCCC------CCCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHH
T ss_pred cCCCCeEEeeCCHHhcCCcccCCCCcceee---ccCC------CCCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHH
Confidence 135677787777777654222111111111 1111 111223355 333345679999999987667788889
Q ss_pred HHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCcee
Q 012083 307 LALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFL 386 (471)
Q Consensus 307 ~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l 386 (471)
+++++.+.+.+++|.+++.. ..+.+. ..++|+.+.+|+|+..+|+++++ ||+|||.||++||+++|+|+|
T Consensus 263 ~~~~l~~~~~~~~~~~g~~~---~~~~l~-----~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v 332 (412)
T 3otg_A 263 AIDGLAGLDADVLVASGPSL---DVSGLG-----EVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQL 332 (412)
T ss_dssp HHHHHHTSSSEEEEECCSSC---CCTTCC-----CCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEE
T ss_pred HHHHHHcCCCEEEEEECCCC---Chhhhc-----cCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEE
Confidence 99999988999999887651 011121 23678999999999999987776 999999999999999999999
Q ss_pred ecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Q 012083 387 CWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQK 450 (471)
Q Consensus 387 ~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 450 (471)
++|...||..|+..+++ .|+|..+.. ..++.++|.++|.++|+|+++++++.+.++++.+
T Consensus 333 ~~p~~~~q~~~~~~v~~-~g~g~~~~~---~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~ 392 (412)
T 3otg_A 333 SFPWAGDSFANAQAVAQ-AGAGDHLLP---DNISPDSVSGAAKRLLAEESYRAGARAVAAEIAA 392 (412)
T ss_dssp ECCCSTTHHHHHHHHHH-HTSEEECCG---GGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred ecCCchhHHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc
Confidence 99999999999999999 699999975 5679999999999999999999999999999876
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=3.3e-29 Score=243.54 Aligned_cols=336 Identities=11% Similarity=0.031 Sum_probs=207.8
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchh--hhHHhhhcCCCCccCCCCCCeEEEeCCCC-CCCCCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICE--RIKESRQLGSFSEMGDAQQLVRIVPLPDG-LEPEDD 93 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~ 93 (471)
+.||+|...|+.||++|+++||++|+++||+|+|+++....+ .+.+. |+.++.++.. +.....
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~--------------g~~~~~i~~~~~~~~~~ 67 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA--------------GLPLHLIQVSGLRGKGL 67 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG--------------TCCEEECC---------
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc--------------CCcEEEEECCCcCCCCH
Confidence 468999998889999999999999999999999999876432 33433 8888887632 221111
Q ss_pred ---cccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeCchHHHHHHHhch
Q 012083 94 ---RKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYTSAPGILAMIMNI 168 (471)
Q Consensus 94 ---~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 168 (471)
...+..++..+ .....++++ .+||+||++..+. .+..+|..+|||++..-.
T Consensus 68 ~~~~~~~~~~~~~~-----~~~~~~l~~-------~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~------------ 123 (365)
T 3s2u_A 68 KSLVKAPLELLKSL-----FQALRVIRQ-------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ------------ 123 (365)
T ss_dssp -----CHHHHHHHH-----HHHHHHHHH-------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC------------
T ss_pred HHHHHHHHHHHHHH-----HHHHHHHHh-------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEec------------
Confidence 11122222221 123344555 8999999997655 456788999999987321
Q ss_pred hhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhh
Q 012083 169 PKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANK 248 (471)
Q Consensus 169 p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~ 248 (471)
+ .+|+.. .+++ .+.++.++......+ +
T Consensus 124 ------n---------------~~~G~~---------------------nr~l------~~~a~~v~~~~~~~~-----~ 150 (365)
T 3s2u_A 124 ------N---------------AVAGTA---------------------NRSL------APIARRVCEAFPDTF-----P 150 (365)
T ss_dssp ------S---------------SSCCHH---------------------HHHH------GGGCSEEEESSTTSS-----C
T ss_pred ------c---------------hhhhhH---------------------HHhh------ccccceeeecccccc-----c
Confidence 0 111110 0111 124455554432211 2
Q ss_pred hCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCC----CCEEEEEcC
Q 012083 249 ILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAG----QPFLCGVRP 324 (471)
Q Consensus 249 ~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~----~~~i~~~~~ 324 (471)
...+..++|........ .. .. ......+++++|++..||..... ....+.++++.+. ..++|.++.
T Consensus 151 ~~~k~~~~g~pvr~~~~-----~~-~~--~~~~~~~~~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~~~G~ 220 (365)
T 3s2u_A 151 ASDKRLTTGNPVRGELF-----LD-AH--ARAPLTGRRVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRHQAGR 220 (365)
T ss_dssp C---CEECCCCCCGGGC-----CC-TT--SSCCCTTSCCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEEECCT
T ss_pred CcCcEEEECCCCchhhc-----cc-hh--hhcccCCCCcEEEEECCcCCccc--cchhhHHHHHhcccccceEEEEecCc
Confidence 23466677755433211 00 00 11122234569999999975533 2334556665543 356666654
Q ss_pred CCCCCCCCCCCchhHHhhCCCcEEEeccchh-hhhccCcceeeeeccCcchhhHhhhcCCceeecccc----cchhhhHH
Q 012083 325 GFINGSSTNNPDGLVAKVADFGKMVKWAPQE-KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWG----HDHLYIKS 399 (471)
Q Consensus 325 ~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~-~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~ 399 (471)
. ..+.+ ....+..+.++.+.+|++++ .+|+.+++ +|||+|.+|++|++++|+|+|.+|+. .+|..||+
T Consensus 221 ~----~~~~~-~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~ 293 (365)
T 3s2u_A 221 Q----HAEIT-AERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAE 293 (365)
T ss_dssp T----THHHH-HHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHH
T ss_pred c----ccccc-cceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHH
Confidence 3 11111 11223456789999999986 79977776 99999999999999999999999974 58999999
Q ss_pred HHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012083 400 CICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469 (471)
Q Consensus 400 ~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 469 (471)
.+++ .|+|..+.. ..++++.|.++|.++|+|++.++++.+-++++.. . .+.+.+.+.|.++
T Consensus 294 ~l~~-~G~a~~l~~---~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~~----~-~aa~~ia~~i~~l 354 (365)
T 3s2u_A 294 FLVR-SGAGRLLPQ---KSTGAAELAAQLSEVLMHPETLRSMADQARSLAK----P-EATRTVVDACLEV 354 (365)
T ss_dssp HHHT-TTSEEECCT---TTCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTCC----T-THHHHHHHHHHHH
T ss_pred HHHH-CCCEEEeec---CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcCC----c-cHHHHHHHHHHHH
Confidence 9999 699999974 7789999999999999998765554444433321 2 2344455555443
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.3e-27 Score=206.79 Aligned_cols=164 Identities=18% Similarity=0.328 Sum_probs=140.8
Q ss_pred cCcchhcccccCCCCCcEEEEecCccc-cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEE
Q 012083 271 SEDLTCLSWLDKQPPGSVIYAAFGSIS-KLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMV 349 (471)
Q Consensus 271 ~~~~~l~~~l~~~~~~~vv~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~ 349 (471)
+.+.++.+|++..+++++||+++||+. ......+..+++++++.+.+++|+.++. . ++ ..++|+++.
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~----~----~~----~~~~~v~~~ 73 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGN----K----PD----TLGLNTRLY 73 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSS----C----CT----TCCTTEEEE
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCc----C----cc----cCCCcEEEe
Confidence 456788899987766789999999985 4567788899999998889999998754 1 11 236789999
Q ss_pred eccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHH
Q 012083 350 KWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVD 429 (471)
Q Consensus 350 ~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~ 429 (471)
+|+||.+++.|+.+++||||||+||++||+++|+|+|++|...||..||.++++ .|+|+.++. ..++.++|.++|.
T Consensus 74 ~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~ 149 (170)
T 2o6l_A 74 KWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDF---NTMSSTDLLNALK 149 (170)
T ss_dssp SSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCT---TTCCHHHHHHHHH
T ss_pred cCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecc---ccCCHHHHHHHHH
Confidence 999999999888899999999999999999999999999999999999999999 699999975 6789999999999
Q ss_pred HHhCcHHHHHHHHHHHHHHHH
Q 012083 430 ELLSNDVVRKNALKLKELAQK 450 (471)
Q Consensus 430 ~ll~~~~~~~~a~~l~~~~~~ 450 (471)
++++|++|+++++++++.+++
T Consensus 150 ~ll~~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 150 RVINDPSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHCHHHHHHHHHHC-----
T ss_pred HHHcCHHHHHHHHHHHHHhhC
Confidence 999999999999999998864
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.88 E-value=3e-21 Score=187.74 Aligned_cols=318 Identities=12% Similarity=0.046 Sum_probs=197.4
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchh--hhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICE--RIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDR 94 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 94 (471)
+|||++++.+..||..+++.|+++|+++||+|++++...... .+.+. |+.+..++......
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~--------------g~~~~~~~~~~~~~--- 68 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKH--------------GIEIDFIRISGLRG--- 68 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGG--------------TCEEEECCCCCCTT---
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcccc--------------CCceEEecCCccCc---
Confidence 489999998888999999999999999999999999865322 22222 77877765321111
Q ss_pred ccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCc--chHHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 95 KDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTF--GWALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
......+..... ....+..+.+.+++ .+||+|+++... ..+..++..+|+|++......
T Consensus 69 ~~~~~~~~~~~~-~~~~~~~l~~~l~~----~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~-------------- 129 (364)
T 1f0k_A 69 KGIKALIAAPLR-IFNAWRQARAIMKA----YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG-------------- 129 (364)
T ss_dssp CCHHHHHTCHHH-HHHHHHHHHHHHHH----HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS--------------
T ss_pred CccHHHHHHHHH-HHHHHHHHHHHHHh----cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC--------------
Confidence 111111111000 01112233333333 799999998653 245677888999998643210
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhhCCC
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPS 252 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~ 252 (471)
.++ ...+. ..+.++.+++.+... .++
T Consensus 130 -------------------~~~---------------------~~~~~------~~~~~d~v~~~~~~~--------~~~ 155 (364)
T 1f0k_A 130 -------------------IAG---------------------LTNKW------LAKIATKVMQAFPGA--------FPN 155 (364)
T ss_dssp -------------------SCC---------------------HHHHH------HTTTCSEEEESSTTS--------SSS
T ss_pred -------------------CCc---------------------HHHHH------HHHhCCEEEecChhh--------cCC
Confidence 000 00011 123567777655332 124
Q ss_pred cceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCC
Q 012083 253 IIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA--GQPFLCGVRPGFINGS 330 (471)
Q Consensus 253 ~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~ 330 (471)
+..+|....... ..... ..+.+...+++++|++..|+... ......++++++.+ +.++++.+++. .
T Consensus 156 ~~~i~n~v~~~~-----~~~~~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~----~ 223 (364)
T 1f0k_A 156 AEVVGNPVRTDV-----LALPL-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKG----S 223 (364)
T ss_dssp CEECCCCCCHHH-----HTSCC-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTT----C
T ss_pred ceEeCCccchhh-----cccch-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCc----h
Confidence 555553322110 00000 01122222345678888888533 34445566666554 45666666654 1
Q ss_pred CCCCCchhHH---hhC-CCcEEEeccch-hhhhccCcceeeeeccCcchhhHhhhcCCceeecccc---cchhhhHHHHH
Q 012083 331 STNNPDGLVA---KVA-DFGKMVKWAPQ-EKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWG---HDHLYIKSCIC 402 (471)
Q Consensus 331 ~~~lp~~~~~---~~~-~nv~~~~~vpq-~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~v~ 402 (471)
.+.+.+ +.+ +|+.+.+|+++ ..+++.+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+.
T Consensus 224 ----~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~ 297 (364)
T 1f0k_A 224 ----QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLE 297 (364)
T ss_dssp ----HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHH
T ss_pred ----HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHH
Confidence 122222 222 58999999955 578977777 99999999999999999999999987 79999999999
Q ss_pred hhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHH
Q 012083 403 DDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELA 448 (471)
Q Consensus 403 ~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~ 448 (471)
+ .|.|..++. ..++.+++.++|.++ |++.+++..+-+++.
T Consensus 298 ~-~g~g~~~~~---~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~ 337 (364)
T 1f0k_A 298 K-AGAAKIIEQ---PQLSVDAVANTLAGW--SRETLLTMAERARAA 337 (364)
T ss_dssp H-TTSEEECCG---GGCCHHHHHHHHHTC--CHHHHHHHHHHHHHT
T ss_pred h-CCcEEEecc---ccCCHHHHHHHHHhc--CHHHHHHHHHHHHHh
Confidence 9 599998875 556789999999998 877776665555443
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.69 E-value=5.6e-16 Score=143.00 Aligned_cols=115 Identities=7% Similarity=-0.001 Sum_probs=86.8
Q ss_pred CcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHh--hCCCcEEEeccchh-hhhccCc
Q 012083 286 GSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAK--VADFGKMVKWAPQE-KVLAHPS 362 (471)
Q Consensus 286 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~--~~~nv~~~~~vpq~-~lL~~~~ 362 (471)
.+.|+|++|... ..+....+++++.+.. ++.++++.. ....+.+.+. ...|+.+..|++++ .+|+.++
T Consensus 157 ~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~------~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aD 227 (282)
T 3hbm_A 157 KYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSS------NPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESN 227 (282)
T ss_dssp CEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTT------CTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEE
T ss_pred CCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCC------chHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCC
Confidence 458999999642 3335566778876544 566666654 1222333222 13589999999987 6996666
Q ss_pred ceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecC
Q 012083 363 VACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEP 413 (471)
Q Consensus 363 ~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~ 413 (471)
+ +||+|| +|++|++++|+|++++|...+|..||..+++ .|++..+..
T Consensus 228 l--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~~ 274 (282)
T 3hbm_A 228 K--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYKY 274 (282)
T ss_dssp E--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECGG
T ss_pred E--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcch
Confidence 5 999999 8999999999999999999999999999999 699999853
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.60 E-value=2.4e-15 Score=133.04 Aligned_cols=134 Identities=8% Similarity=0.080 Sum_probs=94.7
Q ss_pred cCCCCCcEEEEecCccccCCHHHHHHH-----HHHHHhCC-CCEEEEEcCCCCCCCCCCCCchhHHhh---------C--
Q 012083 281 DKQPPGSVIYAAFGSISKLSQQQFNEL-----ALGLELAG-QPFLCGVRPGFINGSSTNNPDGLVAKV---------A-- 343 (471)
Q Consensus 281 ~~~~~~~vv~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~lp~~~~~~~---------~-- 343 (471)
...+++++|||+.||... -.+.+..+ +++|...+ .++++.++.... .....+.+.. |
T Consensus 23 ~~~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~-----~~~~~~~~~~~~~~~~~l~p~~ 96 (224)
T 2jzc_A 23 EGIIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS-----SEFEHLVQERGGQRESQKIPID 96 (224)
T ss_dssp -CCCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC-----CCCCSHHHHHTCEECSCCCSSC
T ss_pred CCCCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch-----hhHHHHHHhhhccccccccccc
Confidence 333456799999999732 23333333 48887777 789999886511 0111111111 1
Q ss_pred ---------------C--CcEEEeccchh-hhhc-cCcceeeeeccCcchhhHhhhcCCceeecccc----cchhhhHHH
Q 012083 344 ---------------D--FGKMVKWAPQE-KVLA-HPSVACYLTHCGWNSTMEGISMGVPFLCWPWG----HDHLYIKSC 400 (471)
Q Consensus 344 ---------------~--nv~~~~~vpq~-~lL~-~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~ 400 (471)
. ++.+.+|++++ .+|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~ 174 (224)
T 2jzc_A 97 QFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADK 174 (224)
T ss_dssp TTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHH
T ss_pred cccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHH
Confidence 2 34456888886 7896 6666 99999999999999999999999984 479999999
Q ss_pred HHhhhcceeeecCCCCCCcCHhHHHHHHHHH
Q 012083 401 ICDDWKIGLWLEPDDNGIIGRHEIKRKVDEL 431 (471)
Q Consensus 401 v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~l 431 (471)
+++ .|+|+.+ +.+.|.++|+++
T Consensus 175 l~~-~G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 175 FVE-LGYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp HHH-HSCCCEE--------CSCTTTHHHHHH
T ss_pred HHH-CCCEEEc--------CHHHHHHHHHHH
Confidence 999 6998766 446777777776
No 25
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.56 E-value=1.3e-13 Score=134.32 Aligned_cols=321 Identities=11% Similarity=-0.014 Sum_probs=168.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEE-EeCCCCCCCCCCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC-RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRI-VPLPDGLEPEDDRK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~ 95 (471)
|||++++.. .++......|+++|.++ ||+|.++++............ . .++.+ ..++-.- ...
T Consensus 6 mkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~----~~~ 70 (376)
T 1v4v_A 6 KRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALS-L---------FGIQEDRNLDVMQ----ERQ 70 (376)
T ss_dssp EEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHH-T---------TTCCCSEECCCCS----SCC
T ss_pred eEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHH-H---------cCCCcccccccCC----CCc
Confidence 899999844 44455567889999998 899887766543332221110 0 14332 2222110 111
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECC--Cc-chHHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV--TF-GWALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~--~~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
.....+.. ....+.+++++ .+||+|++-. .. ..+..+|..+|||++.+.....
T Consensus 71 ~~~~~~~~----~~~~l~~~l~~-------~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~------------- 126 (376)
T 1v4v_A 71 ALPDLAAR----ILPQAARALKE-------MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLR------------- 126 (376)
T ss_dssp CHHHHHHH----HHHHHHHHHHH-------TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCC-------------
T ss_pred cHHHHHHH----HHHHHHHHHHH-------cCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCCc-------------
Confidence 22111111 11234455555 8999999832 22 2456788999999875422100
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhh-hh-C
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSAN-KI-L 250 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~-~~-~ 250 (471)
.... .. .+ ........+ ...++.+++.+...-+.-.. .. .
T Consensus 127 ------------------------~~~~--~~-~~-----~~~~~~~~~------~~~~~~~~~~s~~~~~~l~~~g~~~ 168 (376)
T 1v4v_A 127 ------------------------SGNL--KE-PF-----PEEANRRLT------DVLTDLDFAPTPLAKANLLKEGKRE 168 (376)
T ss_dssp ------------------------CSCT--TS-ST-----THHHHHHHH------HHHCSEEEESSHHHHHHHHTTTCCG
T ss_pred ------------------------cccc--cC-CC-----chHHHHHHH------HHHhceeeCCCHHHHHHHHHcCCCc
Confidence 0000 00 00 011111111 13467777776554332211 11 1
Q ss_pred CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCC
Q 012083 251 PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA-----GQPFLCGVRPG 325 (471)
Q Consensus 251 ~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~ 325 (471)
.++..+|....+.. ...+...++.+.+ ++++.|+++.|...... .+..+++|++.+ +.++++..+++
T Consensus 169 ~ki~vi~n~~~d~~---~~~~~~~~~~~~~---~~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~ 240 (376)
T 1v4v_A 169 EGILVTGQTGVDAV---LLAAKLGRLPEGL---PEGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN 240 (376)
T ss_dssp GGEEECCCHHHHHH---HHHHHHCCCCTTC---CSSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC
T ss_pred ceEEEECCchHHHH---hhhhhhhHHHHhc---CCCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC
Confidence 24666664321110 0000001111222 23457788888653222 344455555432 34555444432
Q ss_pred CCCCCCCCCCchhHHhh--CCCcEEEeccch---hhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHH
Q 012083 326 FINGSSTNNPDGLVAKV--ADFGKMVKWAPQ---EKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSC 400 (471)
Q Consensus 326 ~~~~~~~~lp~~~~~~~--~~nv~~~~~vpq---~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 400 (471)
..+.+.+.+.. .+++.+.+++++ ..+++.+++ ||+++| |.+.||+++|+|+|+.+...++..
T Consensus 241 ------~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~---- 307 (376)
T 1v4v_A 241 ------PVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE---- 307 (376)
T ss_dssp ------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----
T ss_pred ------HHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----
Confidence 00111222211 358888866665 478866666 998884 446699999999999876666554
Q ss_pred HHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHH
Q 012083 401 ICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALK 443 (471)
Q Consensus 401 v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~ 443 (471)
+.+ .|.|..+. .+.++|.+++.++++|++.+++..+
T Consensus 308 ~~~-~g~g~lv~------~d~~~la~~i~~ll~d~~~~~~~~~ 343 (376)
T 1v4v_A 308 GLK-AGILKLAG------TDPEGVYRVVKGLLENPEELSRMRK 343 (376)
T ss_dssp HHH-HTSEEECC------SCHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred hhc-CCceEECC------CCHHHHHHHHHHHHhChHhhhhhcc
Confidence 245 38887773 2889999999999999876655544
No 26
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.51 E-value=5.1e-13 Score=130.90 Aligned_cols=345 Identities=11% Similarity=0.017 Sum_probs=180.9
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEE-EeCCCCCCCCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRI-VPLPDGLEPED 92 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~ 92 (471)
++|||+++. ++...+.=+.+|.++|.++ |+++.++.+....+...+.. ..+ ++.. +.+. -..
T Consensus 26 ~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~-~~~---------~i~~~~~l~----v~~ 90 (403)
T 3ot5_A 26 AKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVL-EIF---------DIKPDIDLD----IMK 90 (403)
T ss_dssp CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHH-HHT---------TCCCSEECC----CCC
T ss_pred ccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHH-Hhc---------CCCCCcccc----cCC
Confidence 457998887 7777777779999999987 68987665553321111110 001 3311 1111 111
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECC--C-cchHHHHHHHcCCceEEEeCchHHHHHHHhchh
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV--T-FGWALQVAAKLELKKASIYTSAPGILAMIMNIP 169 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~--~-~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p 169 (471)
........ + ......+.+++++ .+||+|++-. . ..++..+|..+|||++.+....
T Consensus 91 ~~~~~~~~---~-~~~~~~l~~~l~~-------~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~agl----------- 148 (403)
T 3ot5_A 91 KGQTLAEI---T-SRVMNGINEVIAA-------ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGL----------- 148 (403)
T ss_dssp -CCCHHHH---H-HHHHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC-----------
T ss_pred CCCCHHHH---H-HHHHHHHHHHHHH-------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-----------
Confidence 12233221 1 1223335566666 8999999732 2 2345788999999987643210
Q ss_pred hhhhhCCCCCCcccccccccccCCCCCCCCc-cccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhh
Q 012083 170 KFIEAGIISSDGIVIKNEKIELSPYLPAASP-AEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANK 248 (471)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~ 248 (471)
..+.. ..++ ....+..+. ..++.+++.+...-+.-...
T Consensus 149 --------------------------rs~~~~~~~p---------~~~~r~~~~------~~a~~~~~~se~~~~~l~~~ 187 (403)
T 3ot5_A 149 --------------------------RTWNKYSPFP---------EEMNRQLTG------VMADIHFSPTKQAKENLLAE 187 (403)
T ss_dssp --------------------------CCSCTTSSTT---------HHHHHHHHH------HHCSEEEESSHHHHHHHHHT
T ss_pred --------------------------cccccccCCc---------HHHHHHHHH------HhcCEEECCCHHHHHHHHHc
Confidence 00000 0000 111111111 24677777776544332111
Q ss_pred -h-CCCcceeccccCCCCC-CCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHh-----CCCCEEE
Q 012083 249 -I-LPSIIPVGPLIANGQP-TGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLEL-----AGQPFLC 320 (471)
Q Consensus 249 -~-~~~~~~vGp~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~ 320 (471)
. +.++..+|....+... .... ....+..+.+ +++++++++.|....... .+..+++++.. .+.++++
T Consensus 188 Gi~~~~i~vvGn~~~D~~~~~~~~-~~~~~~~~~l---~~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~ 262 (403)
T 3ot5_A 188 GKDPATIFVTGNTAIDALKTTVQK-DYHHPILENL---GDNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVY 262 (403)
T ss_dssp TCCGGGEEECCCHHHHHHHHHSCT-TCCCHHHHSC---TTCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEE
T ss_pred CCCcccEEEeCCchHHHHHhhhhh-hcchHHHHhc---cCCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEE
Confidence 1 2368888854322100 0000 0011222222 345678887664322111 24455555533 2445665
Q ss_pred EEcCCCCCCCCCCCCchhHHh--hCCCcEEEeccch---hhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchh
Q 012083 321 GVRPGFINGSSTNNPDGLVAK--VADFGKMVKWAPQ---EKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHL 395 (471)
Q Consensus 321 ~~~~~~~~~~~~~lp~~~~~~--~~~nv~~~~~vpq---~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~ 395 (471)
..+++ ..+...+.+. ..+++++.+++++ ..+++++++ +|+..|..+ .||..+|+|+|++|-..++.
T Consensus 263 ~~~~~------~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~ 333 (403)
T 3ot5_A 263 PMHLN------PAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERP 333 (403)
T ss_dssp ECCSC------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCH
T ss_pred ecCCC------HHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcch
Confidence 54432 0011111111 2368889998874 368866666 998875333 69999999999997666655
Q ss_pred hhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH
Q 012083 396 YIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIK 467 (471)
Q Consensus 396 ~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 467 (471)
. +.+ .|.|+.+.. +.++|.+++.++++|++.++++.+.+..+ ..|+++.+.++.+.+
T Consensus 334 e----~v~-~g~~~lv~~------d~~~l~~ai~~ll~~~~~~~~m~~~~~~~----g~~~aa~rI~~~l~~ 390 (403)
T 3ot5_A 334 E----GIE-AGTLKLIGT------NKENLIKEALDLLDNKESHDKMAQAANPY----GDGFAANRILAAIKS 390 (403)
T ss_dssp H----HHH-HTSEEECCS------CHHHHHHHHHHHHHCHHHHHHHHHSCCTT----CCSCHHHHHHHHHHH
T ss_pred h----hee-CCcEEEcCC------CHHHHHHHHHHHHcCHHHHHHHHhhcCcc----cCCcHHHHHHHHHHH
Confidence 3 245 388877742 78999999999999987766554433222 335555555544443
No 27
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.49 E-value=2.5e-11 Score=120.48 Aligned_cols=343 Identities=12% Similarity=0.057 Sum_probs=175.5
Q ss_pred cEEEEEcC-----------CCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCC
Q 012083 18 VHVLLVSF-----------PAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPD 86 (471)
Q Consensus 18 ~~Il~~~~-----------~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 86 (471)
|||+|++. ...|+-..+..|++.|.++||+|++++........... ...++++++.++.
T Consensus 21 mkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~----------~~~~~v~v~~~~~ 90 (438)
T 3c48_A 21 MRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV----------RVAENLRVINIAA 90 (438)
T ss_dssp CEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEE----------EEETTEEEEEECC
T ss_pred heeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccc----------cccCCeEEEEecC
Confidence 89999995 24688899999999999999999999875432211000 0113777777654
Q ss_pred CCCCCCCcccHHHHHHHHHhhccHHHHHHHHH-HhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeCchHHHHH
Q 012083 87 GLEPEDDRKDEAKMTRSISKVMPGYLEELIQK-INQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYTSAPGILA 163 (471)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~ 163 (471)
..............+..+ .+.+++. ++.. .+||+|++..... .+..++..+++|+|..........
T Consensus 91 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~- 159 (438)
T 3c48_A 91 GPYEGLSKEELPTQLAAF-------TGGMLSFTRREK---VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK- 159 (438)
T ss_dssp SCSSSCCGGGGGGGHHHH-------HHHHHHHHHHHT---CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH-
T ss_pred CCccccchhHHHHHHHHH-------HHHHHHHHHhcc---CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc-
Confidence 321111111111111111 1122222 2210 2599999875322 344567788999988755433210
Q ss_pred HHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhc
Q 012083 164 MIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELA 243 (471)
Q Consensus 164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~ 243 (471)
. ..+. . ............. ...+..++.+++.|....+
T Consensus 160 ---~-------------------------~~~~---------~---~~~~~~~~~~~~~--~~~~~~~d~ii~~s~~~~~ 197 (438)
T 3c48_A 160 ---N-------------------------SYRD---------D---SDTPESEARRICE--QQLVDNADVLAVNTQEEMQ 197 (438)
T ss_dssp ---S-------------------------CC----------------CCHHHHHHHHHH--HHHHHHCSEEEESSHHHHH
T ss_pred ---c-------------------------cccc---------c---cCCcchHHHHHHH--HHHHhcCCEEEEcCHHHHH
Confidence 0 0000 0 0000000111111 1224679999999887655
Q ss_pred hhhhhh--C-CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCcccc-CCHHHHHHHHHHHH-hC---C
Q 012083 244 PSANKI--L-PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISK-LSQQQFNELALGLE-LA---G 315 (471)
Q Consensus 244 ~~~~~~--~-~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~~~~al~-~~---~ 315 (471)
.-...+ . .++..|...................+.+-+...+ ...+++..|+... ...+.+-..+..+. +. +
T Consensus 198 ~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~ 276 (438)
T 3c48_A 198 DLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELGIPL-HTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRN 276 (438)
T ss_dssp HHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHHTTCCS-SSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCS
T ss_pred HHHHHhCCChhheEEecCCccccccCCcccchhhhhHHhcCCCC-CCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcc
Confidence 431212 1 2444454332221100000000001222222222 2366777787632 22333333333332 22 2
Q ss_pred CCEEEEEcCCCCCCCCCCCCchhH---Hh--hCCCcEEEeccchh---hhhccCcceeeeec----cCcchhhHhhhcCC
Q 012083 316 QPFLCGVRPGFINGSSTNNPDGLV---AK--VADFGKMVKWAPQE---KVLAHPSVACYLTH----CGWNSTMEGISMGV 383 (471)
Q Consensus 316 ~~~i~~~~~~~~~~~~~~lp~~~~---~~--~~~nv~~~~~vpq~---~lL~~~~~~~~ItH----gG~~s~~eal~~Gv 383 (471)
.+++ .++.....+ ...+.+. ++ ..+++.+.+|+|+. .+++.+++ +|.. |..+++.||+++|+
T Consensus 277 ~~l~-i~G~~~~~g---~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~ 350 (438)
T 3c48_A 277 LRVI-ICGGPSGPN---ATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGT 350 (438)
T ss_dssp EEEE-EECCBC---------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTC
T ss_pred eEEE-EEeCCCCCC---cHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCC
Confidence 3333 344310000 1112222 22 24789999999864 67877777 6654 33568999999999
Q ss_pred ceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHH
Q 012083 384 PFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKN 440 (471)
Q Consensus 384 P~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 440 (471)
|+|+.+. ......+.+ -+.|..++. -+.+++.++|.++++|++.+++
T Consensus 351 PvI~~~~----~~~~e~i~~-~~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~~ 397 (438)
T 3c48_A 351 PVIAARV----GGLPIAVAE-GETGLLVDG-----HSPHAWADALATLLDDDETRIR 397 (438)
T ss_dssp CEEEESC----TTHHHHSCB-TTTEEEESS-----CCHHHHHHHHHHHHHCHHHHHH
T ss_pred CEEecCC----CChhHHhhC-CCcEEECCC-----CCHHHHHHHHHHHHcCHHHHHH
Confidence 9999753 344555556 367888853 4789999999999999865443
No 28
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.47 E-value=3.6e-11 Score=117.46 Aligned_cols=324 Identities=13% Similarity=0.050 Sum_probs=178.5
Q ss_pred CCcEEEEEcC--C--CcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC
Q 012083 16 TNVHVLLVSF--P--AQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE 91 (471)
Q Consensus 16 ~~~~Il~~~~--~--~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 91 (471)
++|||++++. + ..|.-..+..+++.| +||+|++++........... ....++.+..++......
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 70 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAY----------DKTLDYEVIRWPRSVMLP 70 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHH----------HTTCSSEEEEESSSSCCS
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhh----------ccccceEEEEcccccccc
Confidence 4589999975 3 467888899999999 79999999887665422222 112377777765422111
Q ss_pred CCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeCchHHHHHHHhchh
Q 012083 92 DDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYTSAPGILAMIMNIP 169 (471)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p 169 (471)
.. .....+.+++++ .+||+|++..... ....++..+++|.+++.........
T Consensus 71 ----~~---------~~~~~l~~~~~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------ 124 (394)
T 3okp_A 71 ----TP---------TTAHAMAEIIRE-------REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW------ 124 (394)
T ss_dssp ----CH---------HHHHHHHHHHHH-------TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH------
T ss_pred ----ch---------hhHHHHHHHHHh-------cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh------
Confidence 11 111224455555 8999999865443 4455688899985553322111000
Q ss_pred hhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhh
Q 012083 170 KFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKI 249 (471)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~ 249 (471)
.. ........ ......++.+++.|....+.-....
T Consensus 125 ------------------------------------~~------~~~~~~~~---~~~~~~~d~ii~~s~~~~~~~~~~~ 159 (394)
T 3okp_A 125 ------------------------------------SM------LPGSRQSL---RKIGTEVDVLTYISQYTLRRFKSAF 159 (394)
T ss_dssp ------------------------------------TT------SHHHHHHH---HHHHHHCSEEEESCHHHHHHHHHHH
T ss_pred ------------------------------------hh------cchhhHHH---HHHHHhCCEEEEcCHHHHHHHHHhc
Confidence 00 00001111 1123678999999887655432222
Q ss_pred --CCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccc-cCCHHHHHHHHHHHHh--CCCCEEEEEcC
Q 012083 250 --LPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSIS-KLSQQQFNELALGLEL--AGQPFLCGVRP 324 (471)
Q Consensus 250 --~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~-~~~~~~~~~~~~al~~--~~~~~i~~~~~ 324 (471)
..++..|...................+.+-+... ++..+++..|+.. ....+.+...+..+.+ .+.++++. +.
T Consensus 160 ~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~ 237 (394)
T 3okp_A 160 GSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFT-DTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIV-GS 237 (394)
T ss_dssp CSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCC-TTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEE-CC
T ss_pred CCCCCeEEecCCcCHHHcCCCCchhhHHHHHhcCCC-cCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEE-cC
Confidence 2355555433322110000000112222222222 2336677778762 2233333333333322 24454443 32
Q ss_pred CCCCCCCCCCCchhH---HhhCCCcEEEeccchh---hhhccCcceeeee-----------ccCcchhhHhhhcCCceee
Q 012083 325 GFINGSSTNNPDGLV---AKVADFGKMVKWAPQE---KVLAHPSVACYLT-----------HCGWNSTMEGISMGVPFLC 387 (471)
Q Consensus 325 ~~~~~~~~~lp~~~~---~~~~~nv~~~~~vpq~---~lL~~~~~~~~It-----------HgG~~s~~eal~~GvP~l~ 387 (471)
. ...+.+. ....+++.+.+|+|+. .+++.+++ +|. -|..+++.||+++|+|+|+
T Consensus 238 g-------~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~ 308 (394)
T 3okp_A 238 G-------RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIA 308 (394)
T ss_dssp C-------TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEE
T ss_pred c-------hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEE
Confidence 2 1111221 2235789999999865 57877777 665 5556789999999999999
Q ss_pred cccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHH
Q 012083 388 WPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKL 444 (471)
Q Consensus 388 ~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l 444 (471)
.+.. .....+.+ |.|..++. -+.+++.++|.++++|++.+++..+-
T Consensus 309 ~~~~----~~~e~i~~--~~g~~~~~-----~d~~~l~~~i~~l~~~~~~~~~~~~~ 354 (394)
T 3okp_A 309 GTSG----GAPETVTP--ATGLVVEG-----SDVDKLSELLIELLDDPIRRAAMGAA 354 (394)
T ss_dssp CSST----TGGGGCCT--TTEEECCT-----TCHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred eCCC----ChHHHHhc--CCceEeCC-----CCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 7653 23333334 57777743 47899999999999998655544433
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.46 E-value=4.2e-12 Score=124.21 Aligned_cols=327 Identities=11% Similarity=0.007 Sum_probs=175.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEE-EeCCCCCCCCCCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC-RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRI-VPLPDGLEPEDDRK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~ 95 (471)
|||+++. +++....=+.+|.++|.++ |+++.++.+....+...+.. ..+ ++.. +.+. -.....
T Consensus 26 ~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~-~~~---------~i~~~~~l~----~~~~~~ 90 (396)
T 3dzc_A 26 KKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVL-ELF---------SITPDFDLN----IMEPGQ 90 (396)
T ss_dssp EEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHH-HHT---------TCCCSEECC----CCCTTC
T ss_pred CeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHH-Hhc---------CCCCceeee----cCCCCC
Confidence 7888777 7888888889999999987 79987665544432111110 001 3310 1111 101122
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECC--Cc-chHHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV--TF-GWALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~--~~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
...... ......+.+++++ .+||+|++-. .. .++..+|..+|||++.+....
T Consensus 91 ~~~~~~----~~~~~~l~~~l~~-------~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~-------------- 145 (396)
T 3dzc_A 91 TLNGVT----SKILLGMQQVLSS-------EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGL-------------- 145 (396)
T ss_dssp CHHHHH----HHHHHHHHHHHHH-------HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCC--------------
T ss_pred CHHHHH----HHHHHHHHHHHHh-------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc--------------
Confidence 332211 1223335566666 8999998732 33 345678999999987642110
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhh-h-C
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANK-I-L 250 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~-~-~ 250 (471)
..+... . .+ .....+..+ ...++.+++.+...-+.-... . .
T Consensus 146 -----------------------rs~~~~--~-~~-----~~~~~r~~~------~~~a~~~~~~se~~~~~l~~~G~~~ 188 (396)
T 3dzc_A 146 -----------------------RTGNIY--S-PW-----PEEGNRKLT------AALTQYHFAPTDTSRANLLQENYNA 188 (396)
T ss_dssp -----------------------CCSCTT--S-ST-----THHHHHHHH------HHTCSEEEESSHHHHHHHHHTTCCG
T ss_pred -----------------------cccccc--c-CC-----cHHHHHHHH------HHhcCEEECCCHHHHHHHHHcCCCc
Confidence 000000 0 00 011111111 135778888776543332111 1 2
Q ss_pred CCcceeccccCCCCCCCCCCcC--------cchhccccc-CCCCCcEEEEecCccccCCHHHHHHHHHHHHhC-----CC
Q 012083 251 PSIIPVGPLIANGQPTGNFWSE--------DLTCLSWLD-KQPPGSVIYAAFGSISKLSQQQFNELALGLELA-----GQ 316 (471)
Q Consensus 251 ~~~~~vGp~~~~~~~~~~~~~~--------~~~l~~~l~-~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-----~~ 316 (471)
.++..+|-...+.. ...+. ..++.+.+. -.+++++|+++.+-....... +..+++|+..+ +.
T Consensus 189 ~ki~vvGn~~~d~~---~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~-~~~ll~A~~~l~~~~~~~ 264 (396)
T 3dzc_A 189 ENIFVTGNTVIDAL---LAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGG-FERICQALITTAEQHPEC 264 (396)
T ss_dssp GGEEECCCHHHHHH---HHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTH-HHHHHHHHHHHHHHCTTE
T ss_pred CcEEEECCcHHHHH---HHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchhH-HHHHHHHHHHHHHhCCCc
Confidence 36788884322210 00000 022223332 123356777776432222222 45666666443 44
Q ss_pred CEEEEEcCCCCCCCCCCCCchhHHh--hCCCcEEEeccch---hhhhccCcceeeeeccCcchhhHhhhcCCceeecccc
Q 012083 317 PFLCGVRPGFINGSSTNNPDGLVAK--VADFGKMVKWAPQ---EKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWG 391 (471)
Q Consensus 317 ~~i~~~~~~~~~~~~~~lp~~~~~~--~~~nv~~~~~vpq---~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~ 391 (471)
++++.++.+ ..+.+.+.+. ..+++++.+++++ ..+++.+++ +|+-.| |.+.||.++|+|+|+..-.
T Consensus 265 ~~v~~~g~~------~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~ 335 (396)
T 3dzc_A 265 QILYPVHLN------PNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRET 335 (396)
T ss_dssp EEEEECCBC------HHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSS
T ss_pred eEEEEeCCC------hHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCC
Confidence 566554422 0011112211 2368888877753 478877777 999987 6667999999999997554
Q ss_pred cchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHH
Q 012083 392 HDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLK 445 (471)
Q Consensus 392 ~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~ 445 (471)
.++. .+.+ .|.++.+.. +.++|.+++.++++|++.++++.+.+
T Consensus 336 ~~~~----e~v~-~G~~~lv~~------d~~~l~~ai~~ll~d~~~~~~m~~~~ 378 (396)
T 3dzc_A 336 TERP----EAVA-AGTVKLVGT------NQQQICDALSLLLTDPQAYQAMSQAH 378 (396)
T ss_dssp CSCH----HHHH-HTSEEECTT------CHHHHHHHHHHHHHCHHHHHHHHTSC
T ss_pred Ccch----HHHH-cCceEEcCC------CHHHHHHHHHHHHcCHHHHHHHhhcc
Confidence 4543 2345 387766531 68999999999999987766555433
No 30
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.45 E-value=2.6e-12 Score=125.39 Aligned_cols=320 Identities=12% Similarity=0.019 Sum_probs=170.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCC-eEEEEeCCcchh----hhHHhhhcCCCCccCCCCCCeEE-EeCCCCCCCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRI-KVTFVTTEFICE----RIKESRQLGSFSEMGDAQQLVRI-VPLPDGLEPE 91 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh-~Vt~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~ 91 (471)
|||+|++ +..++...+..|+++|+++|+ +|.++.+..... ..... ++.+ ..++-. .
T Consensus 1 mkIl~v~-~~~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~--~- 62 (384)
T 1vgv_A 1 MKVLTVF-GTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLF--------------SIVPDYDLNIM--Q- 62 (384)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHH--------------TCCCSEECCCC--S-
T ss_pred CeEEEEe-cccHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHc--------------CCCCCcceecC--C-
Confidence 5999886 456778888999999999994 777654432211 22222 4333 233211 0
Q ss_pred CCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCC---cchHHHHHHHcCCceEEEeCchHHHHHHHhch
Q 012083 92 DDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVT---FGWALQVAAKLELKKASIYTSAPGILAMIMNI 168 (471)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~---~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 168 (471)
........ .. .....+.+++++ .+||+|++-.. .+.+..+|..+|+|++.+.....
T Consensus 63 -~~~~~~~~---~~-~~~~~l~~~l~~-------~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~--------- 121 (384)
T 1vgv_A 63 -PGQGLTEI---TC-RILEGLKPILAE-------FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR--------- 121 (384)
T ss_dssp -TTSCHHHH---HH-HHHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC---------
T ss_pred -CCccHHHH---HH-HHHHHHHHHHHH-------hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc---------
Confidence 11122221 11 112234555555 89999998432 22456678889999887432110
Q ss_pred hhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhh-
Q 012083 169 PKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSAN- 247 (471)
Q Consensus 169 p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~- 247 (471)
... . +..+ ... ..+.+ ....++.+++.+...-+.-..
T Consensus 122 ----------------------------~~~---~-~~~~----~~~-~~~~~-----~~~~~d~ii~~s~~~~~~l~~~ 159 (384)
T 1vgv_A 122 ----------------------------TGD---L-YSPW----PEE-ANRTL-----TGHLAMYHFSPTETSRQNLLRE 159 (384)
T ss_dssp ----------------------------CSC---T-TSST----THH-HHHHH-----HHTTCSEEEESSHHHHHHHHHT
T ss_pred ----------------------------ccc---c-cCCC----chH-hhHHH-----HHhhccEEEcCcHHHHHHHHHc
Confidence 000 0 0000 000 01110 023588888887655433211
Q ss_pred hh-CCCcceeccccCCCCCCCCCCcC--------cchhccccc-CCCCCcEEEEecCccccCCHHHHHHHHHHHHhC---
Q 012083 248 KI-LPSIIPVGPLIANGQPTGNFWSE--------DLTCLSWLD-KQPPGSVIYAAFGSISKLSQQQFNELALGLELA--- 314 (471)
Q Consensus 248 ~~-~~~~~~vGp~~~~~~~~~~~~~~--------~~~l~~~l~-~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~--- 314 (471)
.. ..++..+|....+.. ...+. ..++.+.+. ..+++++++++.|+...... .+..+++++..+
T Consensus 160 g~~~~~i~vi~n~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~ 235 (384)
T 1vgv_A 160 NVADSRIFITGNTVIDAL---LWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGR-GFEEICHALADIATT 235 (384)
T ss_dssp TCCGGGEEECCCHHHHHH---HHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHH
T ss_pred CCChhhEEEeCChHHHHH---HhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCccccch-HHHHHHHHHHHHHhh
Confidence 11 124555653321100 00000 012223322 21335678888887643322 344455555332
Q ss_pred --CCCEEEEEcCCCCCCCCCCCCchhHHhh--CCCcEEEeccch---hhhhccCcceeeeeccCcchhhHhhhcCCceee
Q 012083 315 --GQPFLCGVRPGFINGSSTNNPDGLVAKV--ADFGKMVKWAPQ---EKVLAHPSVACYLTHCGWNSTMEGISMGVPFLC 387 (471)
Q Consensus 315 --~~~~i~~~~~~~~~~~~~~lp~~~~~~~--~~nv~~~~~vpq---~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~ 387 (471)
+.++++..++. ..+.+.+.+.. .+++.+.+++++ ..+++.+++ ||+.+|. .+.||+++|+|+|+
T Consensus 236 ~~~~~l~i~~g~~------~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~ 306 (384)
T 1vgv_A 236 HQDIQIVYPVHLN------PNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLV 306 (384)
T ss_dssp CTTEEEEEECCBC------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSE--EEESSST-GGGTGGGGTCCEEE
T ss_pred CCCeEEEEEcCCC------HHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcE--EEECCcc-hHHHHHHcCCCEEE
Confidence 34555533321 00111222211 368888777764 467877777 9988854 48899999999999
Q ss_pred cccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHH
Q 012083 388 WPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNAL 442 (471)
Q Consensus 388 ~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~ 442 (471)
.+...+.. .+.+ .|.|..++ . +.++|.++|.++++|++.+++..
T Consensus 307 ~~~~~~~~----e~v~-~g~g~lv~----~--d~~~la~~i~~ll~d~~~~~~~~ 350 (384)
T 1vgv_A 307 MRDTTERP----EAVT-AGTVRLVG----T--DKQRIVEEVTRLLKDENEYQAMS 350 (384)
T ss_dssp ESSCCSCH----HHHH-HTSEEEEC----S--SHHHHHHHHHHHHHCHHHHHHHH
T ss_pred ccCCCCcc----hhhh-CCceEEeC----C--CHHHHHHHHHHHHhChHHHhhhh
Confidence 98744332 3455 38888884 2 88999999999999986655443
No 31
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.40 E-value=5.3e-11 Score=117.97 Aligned_cols=364 Identities=12% Similarity=0.006 Sum_probs=179.3
Q ss_pred CCcEEEEEcCC-----CcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHH------hhhcCCCCccCCCCCCeEEEeC
Q 012083 16 TNVHVLLVSFP-----AQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKE------SRQLGSFSEMGDAQQLVRIVPL 84 (471)
Q Consensus 16 ~~~~Il~~~~~-----~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~ 84 (471)
|+|||++++.. ..|--.-+..|+++|+++||+|+++++......-.. .+............+|+.+..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 46899999833 456667789999999999999999995432211000 0000000000001237777766
Q ss_pred CCCCCCC-CCcccHHHH-HHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeCchHH
Q 012083 85 PDGLEPE-DDRKDEAKM-TRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYTSAPG 160 (471)
Q Consensus 85 ~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~ 160 (471)
+...... ......... ...+. .....+..++..+.... .+||+|.+..... .+..++...++|+|........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~ 157 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAV-TFGRASVLLLNDLLREE--PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNK 157 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHH-HHHHHHHHHHHHHTTTS--CCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCC
T ss_pred cchhccccccccCCcchhhhhhH-HHHHHHHHHHHHHhccC--CCCeEEEecchhhhhhHHHHhhccCCCEEEEeccccc
Confidence 5411111 111111111 22211 12222334444441111 7999999876543 3456778889999886543321
Q ss_pred HHHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchh
Q 012083 161 ILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFH 240 (471)
Q Consensus 161 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~ 240 (471)
. . ++.... ....+. .+. ... .....+. .+..++.+++.|..
T Consensus 158 ~-----~--------------~~~~~~---~~~~~~-----~~~--~~~----~~~~~~~------~~~~ad~ii~~S~~ 198 (439)
T 3fro_A 158 S-----K--------------LPAFYF---HEAGLS-----ELA--PYP----DIDPEHT------GGYIADIVTTVSRG 198 (439)
T ss_dssp C-----C--------------EEHHHH---HHTTCG-----GGC--CSS----EECHHHH------HHHHCSEEEESCHH
T ss_pred c-----c--------------CchHHh---Cccccc-----ccc--ccc----eeeHhhh------hhhhccEEEecCHH
Confidence 0 0 000000 000000 000 000 0001111 23578999998876
Q ss_pred hhchhhhh----hCCCcceeccccCCCCCCCCCC-----cCcchhcccccCCCCCcEEEEecCccc--cCCHHHHHHHHH
Q 012083 241 ELAPSANK----ILPSIIPVGPLIANGQPTGNFW-----SEDLTCLSWLDKQPPGSVIYAAFGSIS--KLSQQQFNELAL 309 (471)
Q Consensus 241 ~l~~~~~~----~~~~~~~vGp~~~~~~~~~~~~-----~~~~~l~~~l~~~~~~~vv~vs~GS~~--~~~~~~~~~~~~ 309 (471)
..+.. .. ...++..|..-.....-..... .....+.+-+.-. ++ .+++..|+.. ....+.+-..+.
T Consensus 199 ~~~~~-~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~i~~~G~~~~~~Kg~~~li~a~~ 275 (439)
T 3fro_A 199 YLIDE-WGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMD-EG-VTFMFIGRFDRGQKGVDVLLKAIE 275 (439)
T ss_dssp HHHHT-HHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTCC-SC-EEEEEECCSSCTTBCHHHHHHHHH
T ss_pred HHHHH-hhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCCC-CC-cEEEEEcccccccccHHHHHHHHH
Confidence 65542 22 1334444433221111000000 0111222222222 23 7777788865 233444444444
Q ss_pred HHHh----CCCCEEEEEcCCCCCCCCC--CCCchhHHhhCCCcEEEeccchh---hhhccCcceeeeec----cCcchhh
Q 012083 310 GLEL----AGQPFLCGVRPGFINGSST--NNPDGLVAKVADFGKMVKWAPQE---KVLAHPSVACYLTH----CGWNSTM 376 (471)
Q Consensus 310 al~~----~~~~~i~~~~~~~~~~~~~--~lp~~~~~~~~~nv~~~~~vpq~---~lL~~~~~~~~ItH----gG~~s~~ 376 (471)
.+.. .+.++++ ++.. ... ..-....++.++++.+.+|+|+. .+++.+++ +|.- |-.+++.
T Consensus 276 ~l~~~~~~~~~~l~i-~G~g----~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~ 348 (439)
T 3fro_A 276 ILSSKKEFQEMRFII-IGKG----DPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVAL 348 (439)
T ss_dssp HHHTSGGGGGEEEEE-ECCC----CHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHH
T ss_pred HHHhcccCCCeEEEE-EcCC----ChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHH
Confidence 4443 2334443 3322 000 00011222335445566999985 57877776 6633 4457999
Q ss_pred HhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhC-cHHHHHHHH
Q 012083 377 EGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLS-NDVVRKNAL 442 (471)
Q Consensus 377 eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~a~ 442 (471)
||+++|+|+|+... ......+.. |.|..+++ -+.+++.++|.++++ |++.+++..
T Consensus 349 EAma~G~Pvi~s~~----~~~~e~~~~--~~g~~~~~-----~d~~~la~~i~~ll~~~~~~~~~~~ 404 (439)
T 3fro_A 349 EAMCLGAIPIASAV----GGLRDIITN--ETGILVKA-----GDPGELANAILKALELSRSDLSKFR 404 (439)
T ss_dssp HHHHTTCEEEEESS----THHHHHCCT--TTCEEECT-----TCHHHHHHHHHHHHHHTTTTTHHHH
T ss_pred HHHHCCCCeEEcCC----CCcceeEEc--CceEEeCC-----CCHHHHHHHHHHHHhcCHHHHHHHH
Confidence 99999999998743 334444433 78888853 478999999999998 764444333
No 32
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.37 E-value=1.1e-10 Score=114.47 Aligned_cols=316 Identities=10% Similarity=0.044 Sum_probs=166.5
Q ss_pred CcEEEEEcCC---C-cccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC
Q 012083 17 NVHVLLVSFP---A-QGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED 92 (471)
Q Consensus 17 ~~~Il~~~~~---~-~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 92 (471)
+|||+|+... . .|.-..+..++++|.++||+|++++............ ...+ ++..++.. .
T Consensus 20 ~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~----------~~~~-~~~~~~~~----~ 84 (406)
T 2gek_A 20 HMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYV----------VSGG-KAVPIPYN----G 84 (406)
T ss_dssp -CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTE----------EECC-CCC----------
T ss_pred cceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCccc----------ccCC-cEEecccc----C
Confidence 5999999842 2 5677889999999999999999999875533111100 0001 11111100 0
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeCchHHHHHHHhchhh
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYTSAPGILAMIMNIPK 170 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~ 170 (471)
....+ .+.......+.+++++ .+||+|++..... .+..++...++|+|.........
T Consensus 85 ---~~~~~--~~~~~~~~~l~~~l~~-------~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--------- 143 (406)
T 2gek_A 85 ---SVARL--RFGPATHRKVKKWIAE-------GDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTK--------- 143 (406)
T ss_dssp -----------CCHHHHHHHHHHHHH-------HCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCS---------
T ss_pred ---Ccccc--cccHHHHHHHHHHHHh-------cCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchh---------
Confidence 00000 0000011224444444 7999999876544 34566777899999864321100
Q ss_pred hhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHH-hhhccCcEEEEcchhhhchhhhhh
Q 012083 171 FIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIR-QNIEASDRILCTWFHELAPSANKI 249 (471)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~s~~~l~~~~~~~ 249 (471)
......+.+.. ..+..++.+++.+....+.-...+
T Consensus 144 --------------------------------------------~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 179 (406)
T 2gek_A 144 --------------------------------------------SLTLSVFQGILRPYHEKIIGRIAVSDLARRWQMEAL 179 (406)
T ss_dssp --------------------------------------------HHHHHHHHSTTHHHHTTCSEEEESSHHHHHHHHHHH
T ss_pred --------------------------------------------hhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHHhc
Confidence 00000011111 224678888888876654432222
Q ss_pred C-CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCcc-cc-CCHHHHHHHHHHHHhC--CCCEEEEEcC
Q 012083 250 L-PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSI-SK-LSQQQFNELALGLELA--GQPFLCGVRP 324 (471)
Q Consensus 250 ~-~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~-~~-~~~~~~~~~~~al~~~--~~~~i~~~~~ 324 (471)
. +++ .|......... ....... .... +..+++..|+. .. ...+.+...+..+.+. +.+++ .++.
T Consensus 180 ~~~~~-vi~~~v~~~~~--~~~~~~~------~~~~-~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~-i~G~ 248 (406)
T 2gek_A 180 GSDAV-EIPNGVDVASF--ADAPLLD------GYPR-EGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEIL-IVGR 248 (406)
T ss_dssp SSCEE-ECCCCBCHHHH--HTCCCCT------TCSC-SSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEE-EESC
T ss_pred CCCcE-EecCCCChhhc--CCCchhh------hccC-CCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEE-EEcC
Confidence 2 233 33322111000 0000000 0001 12566667775 22 2233333333333222 34444 3443
Q ss_pred CCCCCCCCCCCchhHHh---hCCCcEEEeccchh---hhhccCcceeeeec----cC-cchhhHhhhcCCceeecccccc
Q 012083 325 GFINGSSTNNPDGLVAK---VADFGKMVKWAPQE---KVLAHPSVACYLTH----CG-WNSTMEGISMGVPFLCWPWGHD 393 (471)
Q Consensus 325 ~~~~~~~~~lp~~~~~~---~~~nv~~~~~vpq~---~lL~~~~~~~~ItH----gG-~~s~~eal~~GvP~l~~P~~~D 393 (471)
. . . +.+.+. ..+++.+.+++|+. .+++.+++ +|.- .| .+++.||+++|+|+|+.+.
T Consensus 249 ~----~---~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~--- 315 (406)
T 2gek_A 249 G----D---E-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL--- 315 (406)
T ss_dssp S----C---H-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC---
T ss_pred C----c---H-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC---
Confidence 3 1 1 233222 25788999999974 78877887 5533 34 4489999999999999855
Q ss_pred hhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHH
Q 012083 394 HLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALK 443 (471)
Q Consensus 394 Q~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~ 443 (471)
......+.+ -+.|..++. -+.+++.++|.++++|++.+++..+
T Consensus 316 -~~~~e~i~~-~~~g~~~~~-----~d~~~l~~~i~~l~~~~~~~~~~~~ 358 (406)
T 2gek_A 316 -DAFRRVLAD-GDAGRLVPV-----DDADGMAAALIGILEDDQLRAGYVA 358 (406)
T ss_dssp -HHHHHHHTT-TTSSEECCT-----TCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred -CcHHHHhcC-CCceEEeCC-----CCHHHHHHHHHHHHcCHHHHHHHHH
Confidence 445556666 367887743 3789999999999999865554433
No 33
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.36 E-value=2.7e-11 Score=117.63 Aligned_cols=325 Identities=12% Similarity=0.014 Sum_probs=167.0
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhC-C-CeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEE-EeCCCCCCCCCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADC-R-IKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRI-VPLPDGLEPEDD 93 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~r-G-h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~ 93 (471)
+|||++++ ++.++......++++|+++ | |+|+++++....+........ . ++.. ..++... .
T Consensus 8 ~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~----~ 72 (375)
T 3beo_A 8 RLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSI-F---------GITPDFDLNIMK----D 72 (375)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHH-H---------TCCCSEECCCCC----T
T ss_pred CceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHH-c---------CCCCccccccCC----C
Confidence 48999997 4577888889999999987 5 888877765443322211000 0 2221 1221110 1
Q ss_pred cccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc---hHHHHHHHcCCceEEEeCchHHHHHHHhchhh
Q 012083 94 RKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG---WALQVAAKLELKKASIYTSAPGILAMIMNIPK 170 (471)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~ 170 (471)
..+...... .....+.+++++ .+||+|++..... .+..+|...|+|++.+....
T Consensus 73 ~~~~~~~~~----~~~~~l~~~l~~-------~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~------------ 129 (375)
T 3beo_A 73 RQTLIDITT----RGLEGLDKVMKE-------AKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL------------ 129 (375)
T ss_dssp TCCHHHHHH----HHHHHHHHHHHH-------HCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC------------
T ss_pred cccHHHHHH----HHHHHHHHHHHH-------hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc------------
Confidence 111111111 111224455555 8999999853222 34467788999998642110
Q ss_pred hhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhh-hh
Q 012083 171 FIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSAN-KI 249 (471)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~-~~ 249 (471)
..... . ..+ ........+ ...++.+++.+...-+.-.. ..
T Consensus 130 -------------------------~~~~~--~--~~~----~~~~~~~~~------~~~~d~ii~~s~~~~~~~~~~g~ 170 (375)
T 3beo_A 130 -------------------------RTWDK--Y--SPY----PEEMNRQLT------GVMADLHFSPTAKSATNLQKENK 170 (375)
T ss_dssp -------------------------CCSCT--T--SST----THHHHHHHH------HHHCSEEEESSHHHHHHHHHTTC
T ss_pred -------------------------ccccc--c--CCC----hhHhhhhHH------hhhhheeeCCCHHHHHHHHHcCC
Confidence 00000 0 000 011111111 12478888887765443211 11
Q ss_pred C-CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhC-----CCCEEEEEc
Q 012083 250 L-PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA-----GQPFLCGVR 323 (471)
Q Consensus 250 ~-~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~ 323 (471)
. .++..+|....+............++.+-+ +++++++++.|...... ..+..+++++..+ +.++++ +
T Consensus 171 ~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~---~~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~ 244 (375)
T 3beo_A 171 DESRIFITGNTAIDALKTTVKETYSHPVLEKL---GNNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--P 244 (375)
T ss_dssp CGGGEEECCCHHHHHHHHHCCSSCCCHHHHTT---TTSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--E
T ss_pred CcccEEEECChhHhhhhhhhhhhhhHHHHHhc---cCCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--e
Confidence 1 245556533111000000000111111112 23457778888754322 2345566665432 334443 3
Q ss_pred CCCCCCCCCCCCchhHHhhC--CCcEEEeccchh---hhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhH
Q 012083 324 PGFINGSSTNNPDGLVAKVA--DFGKMVKWAPQE---KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIK 398 (471)
Q Consensus 324 ~~~~~~~~~~lp~~~~~~~~--~nv~~~~~vpq~---~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na 398 (471)
.. ....+.+.+.+... +++.+.+++++. .+++.+++ ||+.+| +.+.||+++|+|+|+.......
T Consensus 245 ~g----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~---- 313 (375)
T 3beo_A 245 VH----MNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER---- 313 (375)
T ss_dssp CC----SCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC----
T ss_pred CC----CCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC----
Confidence 22 00001111222223 689987877754 67877776 888864 4588999999999988543332
Q ss_pred HHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHH
Q 012083 399 SCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNAL 442 (471)
Q Consensus 399 ~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~ 442 (471)
..+.+ .|.|..++ . +.++|.++|.++++|++.+++..
T Consensus 314 ~e~v~-~g~g~~v~-----~-d~~~la~~i~~ll~~~~~~~~~~ 350 (375)
T 3beo_A 314 PEGIE-AGTLKLAG-----T-DEETIFSLADELLSDKEAHDKMS 350 (375)
T ss_dssp HHHHH-TTSEEECC-----S-CHHHHHHHHHHHHHCHHHHHHHC
T ss_pred ceeec-CCceEEcC-----C-CHHHHHHHHHHHHhChHhHhhhh
Confidence 22345 38888773 2 78999999999999987665543
No 34
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.33 E-value=2.9e-11 Score=115.96 Aligned_cols=133 Identities=14% Similarity=0.101 Sum_probs=84.6
Q ss_pred EEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchh---hhhccCccee
Q 012083 289 IYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQE---KVLAHPSVAC 365 (471)
Q Consensus 289 v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~---~lL~~~~~~~ 365 (471)
+++..|+.. ....+..++++++.++.+++++-.+. ....+ ..+.++..+|+.+.+|+|+. .+++.+++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~----~~~~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv-- 234 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAW----EPEYF-DEITRRYGSTVEPIGEVGGERRLDLLASAHA-- 234 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCC----CHHHH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCSE--
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcc----cHHHH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCCE--
Confidence 344567653 23345667777777777766543221 00001 12333345899999999975 78877777
Q ss_pred ee--ec------------cCcchhhHhhhcCCceeecccccchhhhHHHHHh--hhcceeeecCCCCCCcCHhHHHHHHH
Q 012083 366 YL--TH------------CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICD--DWKIGLWLEPDDNGIIGRHEIKRKVD 429 (471)
Q Consensus 366 ~I--tH------------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~--~~G~G~~~~~~~~~~~~~~~l~~~i~ 429 (471)
+| +. |-.+++.||+++|+|+|+... ..+...+.+ . +.|..+ .. +.+++.++|.
T Consensus 235 ~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~-----~~-d~~~l~~~i~ 303 (342)
T 2iuy_A 235 VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGT-----DF-APDEARRTLA 303 (342)
T ss_dssp EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSS-----CC-CHHHHHHHHH
T ss_pred EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEc-----CC-CHHHHHHHHH
Confidence 55 32 334689999999999999865 334444444 2 466666 34 8899999999
Q ss_pred HHhCcHHHHHHHHHHH
Q 012083 430 ELLSNDVVRKNALKLK 445 (471)
Q Consensus 430 ~ll~~~~~~~~a~~l~ 445 (471)
++++ .+++++..
T Consensus 304 ~l~~----~~~~~~~~ 315 (342)
T 2iuy_A 304 GLPA----SDEVRRAA 315 (342)
T ss_dssp TSCC----HHHHHHHH
T ss_pred HHHH----HHHHHHHH
Confidence 9997 44554443
No 35
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.30 E-value=3.3e-09 Score=103.62 Aligned_cols=325 Identities=13% Similarity=0.091 Sum_probs=169.1
Q ss_pred CcEEEEEcCCC-cccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcc
Q 012083 17 NVHVLLVSFPA-QGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRK 95 (471)
Q Consensus 17 ~~~Il~~~~~~-~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 95 (471)
+.++....+|. .|.-..+..|+++|+++||+|++++...... .. ...+++.+..++.........
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~------------~~~~~i~~~~~~~~~~~~~~~- 80 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LN------------KVYPNIYFHEVTVNQYSVFQY- 80 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----------------CCCTTEEEECCCCC----CCS-
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-cc------------ccCCceEEEeccccccccccc-
Confidence 67888887775 4577788899999999999999998854321 11 112377776654321110000
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHH-c--CCceEEEeCchHHHHHHHhchhh
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAK-L--ELKKASIYTSAPGILAMIMNIPK 170 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~-l--giP~v~~~~~~~~~~~~~~~~p~ 170 (471)
.... +. ....+.+++++ .+||+|++..... ....++.. + ++|+|.........
T Consensus 81 ~~~~-~~-----~~~~l~~~l~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--------- 138 (394)
T 2jjm_A 81 PPYD-LA-----LASKMAEVAQR-------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT--------- 138 (394)
T ss_dssp CCHH-HH-----HHHHHHHHHHH-------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH---------
T ss_pred cccc-HH-----HHHHHHHHHHH-------cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc---------
Confidence 0000 00 11223444554 7999999875433 22334443 3 59988765432110
Q ss_pred hhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhh-
Q 012083 171 FIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKI- 249 (471)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~- 249 (471)
. .+.. .. .....+ ..+..++.+++.|....+.-....
T Consensus 139 --------------------~-~~~~---------~~------~~~~~~------~~~~~ad~ii~~s~~~~~~~~~~~~ 176 (394)
T 2jjm_A 139 --------------------V-LGSD---------PS------LNNLIR------FGIEQSDVVTAVSHSLINETHELVK 176 (394)
T ss_dssp --------------------T-TTTC---------TT------THHHHH------HHHHHSSEEEESCHHHHHHHHHHTC
T ss_pred --------------------c-cCCC---------HH------HHHHHH------HHHhhCCEEEECCHHHHHHHHHhhC
Confidence 0 0000 00 000111 123578999998877655431111
Q ss_pred -CCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCcccc-CCHHHHHHHHHHHHh-CCCCEEEEEcCCC
Q 012083 250 -LPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISK-LSQQQFNELALGLEL-AGQPFLCGVRPGF 326 (471)
Q Consensus 250 -~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~~~~al~~-~~~~~i~~~~~~~ 326 (471)
..++..+......... .......+.+-+...+ +..+++..|+... ...+.+-..+..+.+ .+.+++ .++..
T Consensus 177 ~~~~~~vi~ngv~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~-i~G~g- 250 (394)
T 2jjm_A 177 PNKDIQTVYNFIDERVY---FKRDMTQLKKEYGISE-SEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLL-LVGDG- 250 (394)
T ss_dssp CSSCEEECCCCCCTTTC---CCCCCHHHHHHTTCC----CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEE-EECCC-
T ss_pred CcccEEEecCCccHHhc---CCcchHHHHHHcCCCC-CCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEEE-EECCc-
Confidence 2355555433322110 0011112222222112 2356666787632 223333333333322 244444 34432
Q ss_pred CCCCCCCCCchhHHh---h--CCCcEEEeccch-hhhhccCcceeee----eccCcchhhHhhhcCCceeecccccchhh
Q 012083 327 INGSSTNNPDGLVAK---V--ADFGKMVKWAPQ-EKVLAHPSVACYL----THCGWNSTMEGISMGVPFLCWPWGHDHLY 396 (471)
Q Consensus 327 ~~~~~~~lp~~~~~~---~--~~nv~~~~~vpq-~~lL~~~~~~~~I----tHgG~~s~~eal~~GvP~l~~P~~~DQ~~ 396 (471)
...+.+.+. . .+++.+.++..+ ..+++.+++ +| .-|..+++.||+++|+|+|+.+.. .
T Consensus 251 ------~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~ 318 (394)
T 2jjm_A 251 ------PEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----G 318 (394)
T ss_dssp ------TTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----T
T ss_pred ------hHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----C
Confidence 111222221 1 367888887554 368877776 77 456677999999999999998653 2
Q ss_pred hHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHH
Q 012083 397 IKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALK 443 (471)
Q Consensus 397 na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~ 443 (471)
....+.+ -+.|..++. -+.+++.++|.++++|++.+++..+
T Consensus 319 ~~e~v~~-~~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~~~~~ 359 (394)
T 2jjm_A 319 IPEVIQH-GDTGYLCEV-----GDTTGVADQAIQLLKDEELHRNMGE 359 (394)
T ss_dssp STTTCCB-TTTEEEECT-----TCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred hHHHhhc-CCceEEeCC-----CCHHHHHHHHHHHHcCHHHHHHHHH
Confidence 3334444 257887753 3789999999999999865544433
No 36
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.29 E-value=1.1e-09 Score=105.94 Aligned_cols=159 Identities=14% Similarity=0.100 Sum_probs=98.6
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHhCCC----C-EEEEEcCCCCCCCCCCCCchhHH---hh--CCCcEEEeccch-h
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLELAGQ----P-FLCGVRPGFINGSSTNNPDGLVA---KV--ADFGKMVKWAPQ-E 355 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~lp~~~~~---~~--~~nv~~~~~vpq-~ 355 (471)
+.+++..|+... ...+..+++++..... . -++.++.. . .+.+.+ +. .+|+.+.++..+ .
T Consensus 196 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g----~----~~~~~~~~~~~~~~~~v~~~g~~~~~~ 265 (374)
T 2iw1_A 196 QNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQD----K----PRKFEALAEKLGVRSNVHFFSGRNDVS 265 (374)
T ss_dssp CEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSS----C----CHHHHHHHHHHTCGGGEEEESCCSCHH
T ss_pred CeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCC----C----HHHHHHHHHHcCCCCcEEECCCcccHH
Confidence 467777787533 2335556667665432 2 23444432 1 122222 22 478888888654 3
Q ss_pred hhhccCcceeeee----ccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHH
Q 012083 356 KVLAHPSVACYLT----HCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDEL 431 (471)
Q Consensus 356 ~lL~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~l 431 (471)
.+++.+++ +|. -|..+++.||+++|+|+|+... ..+...+.+ -+.|..+. ..-+.+++.++|.++
T Consensus 266 ~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~-~~~g~~~~----~~~~~~~l~~~i~~l 334 (374)
T 2iw1_A 266 ELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIAD-ANCGTVIA----EPFSQEQLNEVLRKA 334 (374)
T ss_dssp HHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHH-HTCEEEEC----SSCCHHHHHHHHHHH
T ss_pred HHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhcc-CCceEEeC----CCCCHHHHHHHHHHH
Confidence 68877777 665 4667899999999999999754 345667777 48898885 234789999999999
Q ss_pred hCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH
Q 012083 432 LSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIK 467 (471)
Q Consensus 432 l~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 467 (471)
++|++.+++..+-+.+..+.. .-.+..+.+.++++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 369 (374)
T 2iw1_A 335 LTQSPLRMAWAENARHYADTQ-DLYSLPEKAADIIT 369 (374)
T ss_dssp HHCHHHHHHHHHHHHHHHHHS-CCSCHHHHHHHHHH
T ss_pred HcChHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHH
Confidence 999876655554444443321 11333444444443
No 37
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.28 E-value=2.9e-11 Score=117.41 Aligned_cols=317 Identities=14% Similarity=0.058 Sum_probs=172.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchh-hhHHhhhcCCCCccCCCCCCeEEEeCCC-CCCCCCCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICE-RIKESRQLGSFSEMGDAQQLVRIVPLPD-GLEPEDDRK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~ 95 (471)
.|++++. |++-.+.=+.+|.++|.++ +++.++.+....+ ...+.... ++.+. -|+ .+.. ...
T Consensus 10 ~~~~~v~-GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~-----------~~~i~-~~~~~l~~--~~~ 73 (385)
T 4hwg_A 10 LKVMTIV-GTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFFD-----------DMGIR-KPDYFLEV--AAD 73 (385)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC------------CCCC-CCSEECCC--CCC
T ss_pred hheeEEE-EcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHh-----------hCCCC-CCceecCC--CCC
Confidence 7887765 8999999999999999987 9988877765544 23221111 22220 111 0111 122
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEE--CCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhh
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIA--DVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIE 173 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~--D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 173 (471)
+..+.. ......+++++++ .+||+|++ |....++..+|.++|||++.+....
T Consensus 74 ~~~~~~----~~~~~~l~~~l~~-------~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl--------------- 127 (385)
T 4hwg_A 74 NTAKSI----GLVIEKVDEVLEK-------EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN--------------- 127 (385)
T ss_dssp CSHHHH----HHHHHHHHHHHHH-------HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC---------------
T ss_pred CHHHHH----HHHHHHHHHHHHh-------cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC---------------
Confidence 222222 2233346666666 89999886 3334445889999999976643210
Q ss_pred hCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhh-h-CC
Q 012083 174 AGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANK-I-LP 251 (471)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~-~-~~ 251 (471)
..... .++ ....+..+. ..++.+++.+...-+.-... . ..
T Consensus 128 ----------------------rs~~~-~~p---------ee~nR~~~~------~~a~~~~~~te~~~~~l~~~G~~~~ 169 (385)
T 4hwg_A 128 ----------------------RCFDQ-RVP---------EEINRKIID------HISDVNITLTEHARRYLIAEGLPAE 169 (385)
T ss_dssp ----------------------CCSCT-TST---------HHHHHHHHH------HHCSEEEESSHHHHHHHHHTTCCGG
T ss_pred ----------------------ccccc-cCc---------HHHHHHHHH------hhhceeecCCHHHHHHHHHcCCCcC
Confidence 00000 001 111111111 24677777766543322111 1 23
Q ss_pred CcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCC-HHHHHHHHHHHHhC----CCCEEEEEcCCC
Q 012083 252 SIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLS-QQQFNELALGLELA----GQPFLCGVRPGF 326 (471)
Q Consensus 252 ~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~-~~~~~~~~~al~~~----~~~~i~~~~~~~ 326 (471)
++..+|-...+.-..........++.+.+.-.+ ++.|+++.|...... .+.+..+++++..+ +..+|+...+.
T Consensus 170 ~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~- 247 (385)
T 4hwg_A 170 LTFKSGSHMPEVLDRFMPKILKSDILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR- 247 (385)
T ss_dssp GEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH-
T ss_pred cEEEECCchHHHHHHhhhhcchhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH-
Confidence 678888432221000000001112223333222 458888888753332 24456666766543 56677655421
Q ss_pred CCCCCCCCCchhHHh-----hCCCcEEEeccch---hhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhH
Q 012083 327 INGSSTNNPDGLVAK-----VADFGKMVKWAPQ---EKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIK 398 (471)
Q Consensus 327 ~~~~~~~lp~~~~~~-----~~~nv~~~~~vpq---~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na 398 (471)
....+.+. ..+|+++.+.+++ ..+++++++ +||-.|.. +.||..+|+|+|+++-..+.+.
T Consensus 248 -------~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGgv-~~EA~alG~Pvv~~~~~ter~e-- 315 (385)
T 4hwg_A 248 -------TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGTI-TEEASILNLPALNIREAHERPE-- 315 (385)
T ss_dssp -------HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTTH-HHHHHHTTCCEEECSSSCSCTH--
T ss_pred -------HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCccH-HHHHHHcCCCEEEcCCCccchh--
Confidence 10111111 1357777665554 478877777 99998764 6999999999999987554222
Q ss_pred HHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHH
Q 012083 399 SCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVV 437 (471)
Q Consensus 399 ~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~ 437 (471)
..+ .|.++.+. .+.++|.+++.++|+|+..
T Consensus 316 --~v~-~G~~~lv~------~d~~~i~~ai~~ll~d~~~ 345 (385)
T 4hwg_A 316 --GMD-AGTLIMSG------FKAERVLQAVKTITEEHDN 345 (385)
T ss_dssp --HHH-HTCCEECC------SSHHHHHHHHHHHHTTCBT
T ss_pred --hhh-cCceEEcC------CCHHHHHHHHHHHHhChHH
Confidence 245 38776664 2789999999999998743
No 38
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.27 E-value=1.8e-09 Score=109.09 Aligned_cols=354 Identities=12% Similarity=0.025 Sum_probs=178.6
Q ss_pred CcEEEEEcCC---------------CcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHh---hhcCCCCccCCCCCC
Q 012083 17 NVHVLLVSFP---------------AQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKES---RQLGSFSEMGDAQQL 78 (471)
Q Consensus 17 ~~~Il~~~~~---------------~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 78 (471)
+|||++++.. ..|.-..+..|++.|.++||+|++++........... .... ....+
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~------~~~~g 80 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYY------QETNK 80 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEEC------TTCSS
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhc------cCCCC
Confidence 4899999852 3577788999999999999999999865332110000 0000 01247
Q ss_pred eEEEeCCCCCCCCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeC
Q 012083 79 VRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYT 156 (471)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~ 156 (471)
++++.++...........+...+..+. ..+..++++. . .+||+|.+..... .+..++..+|+|+|....
T Consensus 81 v~v~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~l~~~---~--~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H 151 (499)
T 2r60_A 81 VRIVRIPFGGDKFLPKEELWPYLHEYV----NKIINFYREE---G--KFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGH 151 (499)
T ss_dssp EEEEEECCSCSSCCCGGGCGGGHHHHH----HHHHHHHHHH---T--CCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECS
T ss_pred eEEEEecCCCcCCcCHHHHHHHHHHHH----HHHHHHHHhc---C--CCCCEEEEcCCcchHHHHHHHHhcCCcEEEEcc
Confidence 888777643211111111111111111 1122333321 1 4899999865322 344577888999987655
Q ss_pred chHHHHHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHH--HHhhhccCcEE
Q 012083 157 SAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINV--IRQNIEASDRI 234 (471)
Q Consensus 157 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 234 (471)
.......... .. .+.. ...+ ...+...... ....+..++.+
T Consensus 152 ~~~~~~~~~~----------~~--------------~~~~---~~~~----------~~~~~~~~~~~~~~~~~~~ad~v 194 (499)
T 2r60_A 152 SLGAQKMEKL----------NV--------------NTSN---FKEM----------DERFKFHRRIIAERLTMSYADKI 194 (499)
T ss_dssp SCHHHHHHTT----------CC--------------CSTT---SHHH----------HHHHCHHHHHHHHHHHHHHCSEE
T ss_pred Ccccccchhh----------cc--------------CCCC---cchh----------hhhHHHHHHHHHHHHHHhcCCEE
Confidence 4332110000 00 0000 0000 0000000000 11234689999
Q ss_pred EEcchhhhchhhhh--h--------CCCcceeccccCCCCCCCCCCcCc-----chhccccc-----CCCCCcEEEEecC
Q 012083 235 LCTWFHELAPSANK--I--------LPSIIPVGPLIANGQPTGNFWSED-----LTCLSWLD-----KQPPGSVIYAAFG 294 (471)
Q Consensus 235 l~~s~~~l~~~~~~--~--------~~~~~~vGp~~~~~~~~~~~~~~~-----~~l~~~l~-----~~~~~~vv~vs~G 294 (471)
++.|....+.-... + ..++..|..-..... ..+.. ..+.+-+. ... +..+++..|
T Consensus 195 i~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~----~~~~~~~~~~~~~r~~~~~~~~~~~~-~~~~i~~vG 269 (499)
T 2r60_A 195 IVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRV----FDGEYGDKIKAKITKYLERDLGSERM-ELPAIIASS 269 (499)
T ss_dssp EESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTT----SSSCCCHHHHHHHHHHHHHHSCGGGT-TSCEEEECS
T ss_pred EECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhh----cCccchhhhHHHHHHHhcccccccCC-CCcEEEEee
Confidence 99887765432111 1 123333332221111 11111 11212111 111 235667778
Q ss_pred ccccCCHHHHHHHHHHHHhCC-----CCEEEEEcCCCCCC-CCCCC-------CchhHH---h--hCCCcEEEeccchh-
Q 012083 295 SISKLSQQQFNELALGLELAG-----QPFLCGVRPGFING-SSTNN-------PDGLVA---K--VADFGKMVKWAPQE- 355 (471)
Q Consensus 295 S~~~~~~~~~~~~~~al~~~~-----~~~i~~~~~~~~~~-~~~~l-------p~~~~~---~--~~~nv~~~~~vpq~- 355 (471)
+... ...+..+++|+..+. ...++.+++..... ....+ .+.+.+ + ..++|.+.+++|+.
T Consensus 270 rl~~--~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~ 347 (499)
T 2r60_A 270 RLDQ--KKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQE 347 (499)
T ss_dssp CCCG--GGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHH
T ss_pred cCcc--ccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHH
Confidence 7532 223555666665542 12355555420000 00001 111211 1 25789999999865
Q ss_pred --hhhccC----cceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHH
Q 012083 356 --KVLAHP----SVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIK 425 (471)
Q Consensus 356 --~lL~~~----~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~ 425 (471)
.+++.+ ++ +|.- |--+++.||+++|+|+|+... ......+.. -+.|..+++ -+.+++.
T Consensus 348 ~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~-~~~g~l~~~-----~d~~~la 415 (499)
T 2r60_A 348 LAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDG-GKYGVLVDP-----EDPEDIA 415 (499)
T ss_dssp HHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGG-GTSSEEECT-----TCHHHHH
T ss_pred HHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcC-CceEEEeCC-----CCHHHHH
Confidence 577666 66 6632 334689999999999998853 334445555 257888853 4789999
Q ss_pred HHHHHHhCcHHHHHHH
Q 012083 426 RKVDELLSNDVVRKNA 441 (471)
Q Consensus 426 ~~i~~ll~~~~~~~~a 441 (471)
++|.++++|++.+++.
T Consensus 416 ~~i~~ll~~~~~~~~~ 431 (499)
T 2r60_A 416 RGLLKAFESEETWSAY 431 (499)
T ss_dssp HHHHHHHSCHHHHHHH
T ss_pred HHHHHHHhCHHHHHHH
Confidence 9999999998655443
No 39
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.10 E-value=1e-08 Score=100.88 Aligned_cols=87 Identities=20% Similarity=0.024 Sum_probs=63.8
Q ss_pred CCCcEEEeccc---h---hhhhccCcceeeeecc----CcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeec
Q 012083 343 ADFGKMVKWAP---Q---EKVLAHPSVACYLTHC----GWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLE 412 (471)
Q Consensus 343 ~~nv~~~~~vp---q---~~lL~~~~~~~~ItHg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~ 412 (471)
.++|.+.+|++ + ..+++.+++ +|.-. ..+++.||+++|+|+|+.+. ..+...+.. -+.|..+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~-~~~g~l~- 363 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVD-GETGFLV- 363 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCB-TTTEEEE-
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheec-CCCeEEE-
Confidence 47899999886 2 257766776 66544 46689999999999999764 345555555 3677777
Q ss_pred CCCCCCcCHhHHHHHHHHHhCcHHHHHHHHH
Q 012083 413 PDDNGIIGRHEIKRKVDELLSNDVVRKNALK 443 (471)
Q Consensus 413 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~ 443 (471)
. +.+++.++|.++++|++.+++..+
T Consensus 364 ----~--d~~~la~~i~~ll~~~~~~~~~~~ 388 (416)
T 2x6q_A 364 ----R--DANEAVEVVLYLLKHPEVSKEMGA 388 (416)
T ss_dssp ----S--SHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred ----C--CHHHHHHHHHHHHhCHHHHHHHHH
Confidence 2 789999999999999865554433
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.88 E-value=5.6e-07 Score=94.75 Aligned_cols=93 Identities=9% Similarity=0.060 Sum_probs=61.5
Q ss_pred CCCcEEEe----ccchhhhhc----cCcceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceee
Q 012083 343 ADFGKMVK----WAPQEKVLA----HPSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLW 410 (471)
Q Consensus 343 ~~nv~~~~----~vpq~~lL~----~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~ 410 (471)
.++|.+.+ ++|+.++.. .+++ ||.- |-..++.||+++|+|+|+. |-......+.. -+.|..
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~d-g~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVH-GKSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCB-TTTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHcc-CCcEEE
Confidence 47888887 444454443 3344 6643 3456999999999999996 44445555555 367888
Q ss_pred ecCCCCCCcCHhHHHHHHHHHh----CcHHHHHHHHHHHHH
Q 012083 411 LEPDDNGIIGRHEIKRKVDELL----SNDVVRKNALKLKEL 447 (471)
Q Consensus 411 ~~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~a~~l~~~ 447 (471)
+++ -+.++++++|.+++ .|++.+++..+-+.+
T Consensus 712 v~p-----~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~ 747 (816)
T 3s28_A 712 IDP-----YHGDQAADTLADFFTKCKEDPSHWDEISKGGLQ 747 (816)
T ss_dssp ECT-----TSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHH
T ss_pred eCC-----CCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 854 47789999997766 787655554444333
No 41
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.87 E-value=1.8e-06 Score=88.40 Aligned_cols=91 Identities=12% Similarity=0.034 Sum_probs=65.8
Q ss_pred CCcEEEeccchh---hhhccCcceeeee---ccCcchhhHhhhcCCceeecccc---cchhhhHHHHHhhhcceeeecCC
Q 012083 344 DFGKMVKWAPQE---KVLAHPSVACYLT---HCGWNSTMEGISMGVPFLCWPWG---HDHLYIKSCICDDWKIGLWLEPD 414 (471)
Q Consensus 344 ~nv~~~~~vpq~---~lL~~~~~~~~It---HgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~v~~~~G~G~~~~~~ 414 (471)
++|.+.+++|+. .+++.+++ ||. .|+.+++.||+++|+|+|++|-. .|. -+..+.. .|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~--~~~~l~~-~g~~e~v~-- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARV--AGSLNHH-LGLDEMNV-- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSH--HHHHHHH-HTCGGGBC--
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHH--HHHHHHH-CCChhhhc--
Confidence 789999999854 56877776 652 26677999999999999997642 222 2344555 47777664
Q ss_pred CCCCcCHhHHHHHHHHHhCcHHHHHHHHHHH
Q 012083 415 DNGIIGRHEIKRKVDELLSNDVVRKNALKLK 445 (471)
Q Consensus 415 ~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~ 445 (471)
. +.+++.+++.++++|++.+++..+-+
T Consensus 507 --~--~~~~la~~i~~l~~~~~~~~~~~~~~ 533 (568)
T 2vsy_A 507 --A--DDAAFVAKAVALASDPAALTALHARV 533 (568)
T ss_dssp --S--SHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred --C--CHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 2 78999999999999987666544433
No 42
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.86 E-value=2.5e-07 Score=92.89 Aligned_cols=136 Identities=6% Similarity=-0.003 Sum_probs=80.5
Q ss_pred EEEEecCcccc-CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCc---hhHHhhCCCcE-EEeccchh---hhhc
Q 012083 288 VIYAAFGSISK-LSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPD---GLVAKVADFGK-MVKWAPQE---KVLA 359 (471)
Q Consensus 288 vv~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~---~~~~~~~~nv~-~~~~vpq~---~lL~ 359 (471)
.+++..|++.. ...+.+...+..+.+.+.+++++-.+. ..+.+ .+.++.++++. +.++ +.. .+++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~------~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~ 364 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD------VALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQA 364 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBC------HHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCc------hHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHHh
Confidence 47777888643 223333333333333355655544321 00111 12223357887 5688 543 5787
Q ss_pred cCcceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhh---------cceeeecCCCCCCcCHhHHHH
Q 012083 360 HPSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDW---------KIGLWLEPDDNGIIGRHEIKR 426 (471)
Q Consensus 360 ~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------G~G~~~~~~~~~~~~~~~l~~ 426 (471)
.+++ +|.- |.-+++.||+++|+|+|+... ......+.+ - +.|..++. -+.+++.+
T Consensus 365 ~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~~~la~ 432 (485)
T 1rzu_A 365 GCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFSP-----VTLDGLKQ 432 (485)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEESS-----CSHHHHHH
T ss_pred cCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeCC-----CCHHHHHH
Confidence 7776 6632 445689999999999999754 233444443 2 47777753 46799999
Q ss_pred HHHHHh---CcHHHHHHHH
Q 012083 427 KVDELL---SNDVVRKNAL 442 (471)
Q Consensus 427 ~i~~ll---~~~~~~~~a~ 442 (471)
+|.+++ +|++.+++..
T Consensus 433 ~i~~ll~~~~~~~~~~~~~ 451 (485)
T 1rzu_A 433 AIRRTVRYYHDPKLWTQMQ 451 (485)
T ss_dssp HHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHH
Confidence 999999 7876555443
No 43
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.82 E-value=1.6e-06 Score=86.98 Aligned_cols=137 Identities=12% Similarity=0.075 Sum_probs=79.5
Q ss_pred EEEEecCcccc-CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCch---hHHhhCCCcE-EEeccchh--hhhcc
Q 012083 288 VIYAAFGSISK-LSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDG---LVAKVADFGK-MVKWAPQE--KVLAH 360 (471)
Q Consensus 288 vv~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~---~~~~~~~nv~-~~~~vpq~--~lL~~ 360 (471)
.+++..|++.. ...+.+...+..+.+.+.+++++-.+. ....+. +.++.++++. +.++.... .+++.
T Consensus 293 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ 366 (485)
T 2qzs_A 293 PLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGD------PVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGG 366 (485)
T ss_dssp CEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEEC------HHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHH
T ss_pred eEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCc------hHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHh
Confidence 56666777532 233333333333333355655544321 001111 2223356886 66883332 57877
Q ss_pred Ccceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhh---------cceeeecCCCCCCcCHhHHHHH
Q 012083 361 PSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDW---------KIGLWLEPDDNGIIGRHEIKRK 427 (471)
Q Consensus 361 ~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------G~G~~~~~~~~~~~~~~~l~~~ 427 (471)
+++ +|.- |.-+++.||+++|+|+|+... ......+.. - +.|..++. -+.++++++
T Consensus 367 adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~~~la~~ 434 (485)
T 2qzs_A 367 ADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVASGFVFED-----SNAWSLLRA 434 (485)
T ss_dssp CSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEECS-----SSHHHHHHH
T ss_pred CCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-CccccccccccceEEECC-----CCHHHHHHH
Confidence 777 6632 445688999999999999854 233444443 2 47787753 478999999
Q ss_pred HHHHh---CcHHHHHHHH
Q 012083 428 VDELL---SNDVVRKNAL 442 (471)
Q Consensus 428 i~~ll---~~~~~~~~a~ 442 (471)
|.+++ +|++.+++..
T Consensus 435 i~~ll~~~~~~~~~~~~~ 452 (485)
T 2qzs_A 435 IRRAFVLWSRPSLWRFVQ 452 (485)
T ss_dssp HHHHHHHHTSHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHH
Confidence 99999 7876555443
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.67 E-value=3.2e-06 Score=82.81 Aligned_cols=88 Identities=14% Similarity=0.064 Sum_probs=58.9
Q ss_pred cEEEeccchh---hhhccCcceeeee----ccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcc-----------
Q 012083 346 GKMVKWAPQE---KVLAHPSVACYLT----HCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKI----------- 407 (471)
Q Consensus 346 v~~~~~vpq~---~lL~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~----------- 407 (471)
+.+.+|+|+. .+++.+++ +|. -|..+++.||+++|+|+|+.... .....+.+ |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~--~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSG--DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCT--TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHcc--Ccccccccccccc
Confidence 5566999954 57877777 663 23355899999999999997542 33333333 22
Q ss_pred -----ee--eecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHH
Q 012083 408 -----GL--WLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKEL 447 (471)
Q Consensus 408 -----G~--~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~ 447 (471)
|. .+.. -+.+++.++| ++++|++.+++..+-+.+
T Consensus 328 ~~~~~G~~gl~~~-----~d~~~la~~i-~l~~~~~~~~~~~~~a~~ 368 (413)
T 3oy2_A 328 VDDRDGIGGIEGI-----IDVDDLVEAF-TFFKDEKNRKEYGKRVQD 368 (413)
T ss_dssp CTTTCSSCCEEEE-----CCHHHHHHHH-HHTTSHHHHHHHHHHHHH
T ss_pred cccccCcceeeCC-----CCHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 44 5532 3889999999 999998766554444443
No 45
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.62 E-value=4.3e-06 Score=80.77 Aligned_cols=92 Identities=18% Similarity=0.203 Sum_probs=61.9
Q ss_pred CcEEEeccchh-hhhccCcceeeeec-----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCC
Q 012083 345 FGKMVKWAPQE-KVLAHPSVACYLTH-----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGI 418 (471)
Q Consensus 345 nv~~~~~vpq~-~lL~~~~~~~~ItH-----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~ 418 (471)
++.+.++.... .+++.+++ ++.- +|..++.||+++|+|+|+-|...+.......+.+ -|.++...
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~-~G~l~~~~------ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEK-EGAGFEVK------ 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHH-TTCEEECC------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHH-CCCEEEeC------
Confidence 45555655443 57765665 5431 2457899999999999987766666665555555 37766652
Q ss_pred cCHhHHHHHHHHHhCcHH----HHHHHHHHHHH
Q 012083 419 IGRHEIKRKVDELLSNDV----VRKNALKLKEL 447 (471)
Q Consensus 419 ~~~~~l~~~i~~ll~~~~----~~~~a~~l~~~ 447 (471)
+.++|.++|.++++| + +.+++++..+.
T Consensus 332 -d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 332 -NETELVTKLTELLSV-KKEIKVEEKSREIKGC 362 (374)
T ss_dssp -SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHh
Confidence 678999999999988 5 44444444433
No 46
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.54 E-value=1.3e-05 Score=78.38 Aligned_cols=76 Identities=9% Similarity=0.031 Sum_probs=57.7
Q ss_pred CCCcEEEeccchh---hhhccCcceeeee---c-cCcchhhHhh-------hcCCceeecccccchhhhHHHHHhhhcce
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLT---H-CGWNSTMEGI-------SMGVPFLCWPWGHDHLYIKSCICDDWKIG 408 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~It---H-gG~~s~~eal-------~~GvP~l~~P~~~DQ~~na~~v~~~~G~G 408 (471)
.+||.+.+++|+. .+++.+++ +|. + |-.+++.||+ ++|+|+|+... +... ..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cce
Confidence 5789999999965 57877777 553 2 3345788999 99999999854 4552 567
Q ss_pred ee-ecCCCCCCcCHhHHHHHHHHHhCcHH
Q 012083 409 LW-LEPDDNGIIGRHEIKRKVDELLSNDV 436 (471)
Q Consensus 409 ~~-~~~~~~~~~~~~~l~~~i~~ll~~~~ 436 (471)
.. +.+ -+.+++.++|.++++|++
T Consensus 331 ~l~v~~-----~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 331 RFGYTP-----GNADSVIAAITQALEAPR 354 (406)
T ss_dssp EEEECT-----TCHHHHHHHHHHHHHCCC
T ss_pred EEEeCC-----CCHHHHHHHHHHHHhCcc
Confidence 77 643 378999999999998875
No 47
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.39 E-value=7.2e-07 Score=76.43 Aligned_cols=140 Identities=10% Similarity=0.040 Sum_probs=90.3
Q ss_pred EEEEecCccccCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCCchh---HHhhCCCcEEEeccch---hhhhcc
Q 012083 288 VIYAAFGSISKLSQQQFNELALGLELA-GQPFLCGVRPGFINGSSTNNPDGL---VAKVADFGKMVKWAPQ---EKVLAH 360 (471)
Q Consensus 288 vv~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~lp~~~---~~~~~~nv~~~~~vpq---~~lL~~ 360 (471)
.+++..|+... ...+..+++++... +.++++.-.+. ....+.... ....++|+.+.+|+|+ ..+++.
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~----~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ 97 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFS----KGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSR 97 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCC----TTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHH
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCc----cHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHh
Confidence 44556676532 33456677777766 45665544322 111121111 1124579999999997 478877
Q ss_pred Ccceeeee---ccC-cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHH
Q 012083 361 PSVACYLT---HCG-WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDV 436 (471)
Q Consensus 361 ~~~~~~It---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~ 436 (471)
+++ +|. +.| .+++.||+++|+|+|+... ..+...+.+ .+.|..+ . -+.+++.++|.++++|++
T Consensus 98 adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~-~~~g~~~-~-----~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 98 CKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVIN-EKTGYLV-N-----ADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp CSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCB-TTTEEEE-C-----SCHHHHHHHHHHHHHCTT
T ss_pred CCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcC-CCccEEe-C-----CCHHHHHHHHHHHHhCHH
Confidence 777 665 334 4499999999999998753 445555555 3677777 3 277999999999998886
Q ss_pred H-HHHHHHHHH
Q 012083 437 V-RKNALKLKE 446 (471)
Q Consensus 437 ~-~~~a~~l~~ 446 (471)
. ++++++.++
T Consensus 165 ~~~~~~~~~a~ 175 (177)
T 2f9f_A 165 KFKKDCFRRAK 175 (177)
T ss_dssp TTHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 4 666655543
No 48
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.08 E-value=0.0045 Score=62.46 Aligned_cols=142 Identities=12% Similarity=0.084 Sum_probs=95.2
Q ss_pred CcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEE--EcCCCCCCCCCCCCchhHH-----hhCCCcEEEeccchhh--
Q 012083 286 GSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCG--VRPGFINGSSTNNPDGLVA-----KVADFGKMVKWAPQEK-- 356 (471)
Q Consensus 286 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~--~~~~~~~~~~~~lp~~~~~-----~~~~nv~~~~~vpq~~-- 356 (471)
+.++|.+|++.....++.+....+.+.+.+..++|. ++.. ........+ .+.+++.+.+.+|+.+
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~------~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~l 513 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQS------NGITHPYVERFIKSYLGDSATAHPHSPYHQYL 513 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSC------CGGGHHHHHHHHHHHHGGGEEEECCCCHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC------chhhHHHHHHHHHcCCCccEEEcCCCCHHHHH
Confidence 359999999998889999999999998888777764 3321 111111111 1356788889998654
Q ss_pred -hhccCcceeeee---ccCcchhhHhhhcCCceeeccccc-chhhhHHHHHhhhcceee-ecCCCCCCcCHhHHHHHHHH
Q 012083 357 -VLAHPSVACYLT---HCGWNSTMEGISMGVPFLCWPWGH-DHLYIKSCICDDWKIGLW-LEPDDNGIIGRHEIKRKVDE 430 (471)
Q Consensus 357 -lL~~~~~~~~It---HgG~~s~~eal~~GvP~l~~P~~~-DQ~~na~~v~~~~G~G~~-~~~~~~~~~~~~~l~~~i~~ 430 (471)
.+...++ |+. .+|.+|++|||++|||+|+++-.. --..-+..+.. .|+... +.. +.++..+...+
T Consensus 514 a~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA~------d~eeYv~~Av~ 584 (631)
T 3q3e_A 514 RILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIAN------TVDEYVERAVR 584 (631)
T ss_dssp HHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEES------SHHHHHHHHHH
T ss_pred HHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceecC------CHHHHHHHHHH
Confidence 4455555 543 378899999999999999987421 11222233444 476653 432 67888888889
Q ss_pred HhCcHHHHHHHH
Q 012083 431 LLSNDVVRKNAL 442 (471)
Q Consensus 431 ll~~~~~~~~a~ 442 (471)
+.+|++.+++.+
T Consensus 585 La~D~~~l~~LR 596 (631)
T 3q3e_A 585 LAENHQERLELR 596 (631)
T ss_dssp HHHCHHHHHHHH
T ss_pred HhCCHHHHHHHH
Confidence 999987655543
No 49
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=98.06 E-value=2.2e-05 Score=76.88 Aligned_cols=85 Identities=14% Similarity=-0.027 Sum_probs=57.4
Q ss_pred CCCcEEEeccchh---hhhccCcceeeeecc---C-cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCC
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLTHC---G-WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDD 415 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~ItHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~ 415 (471)
.+++.+.+++|+. .+++.+++ ||.-. | .+++.||+++|+|+|+- ..+ ....+... ..|..+++
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g----~~e~v~~~-~~G~lv~~-- 363 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVITN-KYE----NKDLSNWH-SNIVSLEQ-- 363 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEEE-CBT----TBCGGGTB-TTEEEESS--
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEEe-CCC----cchhhhcC-CCEEEeCC--
Confidence 4678889999865 57877777 66422 3 35679999999999982 221 12233441 46777753
Q ss_pred CCCcCHhHHHHHHHHHhCcHHHHHH
Q 012083 416 NGIIGRHEIKRKVDELLSNDVVRKN 440 (471)
Q Consensus 416 ~~~~~~~~l~~~i~~ll~~~~~~~~ 440 (471)
-+.++++++|.++++|++.+++
T Consensus 364 ---~d~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 364 ---LNPENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp ---CSHHHHHHHHHHHHHHTC----
T ss_pred ---CCHHHHHHHHHHHHcCHHHHHH
Confidence 4789999999999999876665
No 50
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.88 E-value=0.0012 Score=62.80 Aligned_cols=103 Identities=11% Similarity=0.084 Sum_probs=69.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCe-EEEeCCCCCCCCCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLV-RIVPLPDGLEPEDDR 94 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~ 94 (471)
|||+++.....|++.-..++.++|+++ +.+|++++.+.+.+.++.. +.+ +++.++.. ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~-------------p~i~~v~~~~~~----~~~ 63 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM-------------PEVNEAIPMPLG----HGA 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC-------------TTEEEEEEC----------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC-------------CccCEEEEecCC----ccc
Confidence 599999999999999999999999987 9999999998877765433 245 34444210 000
Q ss_pred ccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEE
Q 012083 95 KDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKAS 153 (471)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~ 153 (471)
. ....+.++.+.++. .+||++|.-....-...++...|+|...
T Consensus 64 ~------------~~~~~~~l~~~l~~----~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 64 L------------EIGERRKLGHSLRE----KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -------------CHHHHHHHHHHTTT----TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred c------------chHHHHHHHHHHHh----cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 0 11223455566665 7999999332334556678888999744
No 51
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.84 E-value=0.00052 Score=65.34 Aligned_cols=109 Identities=13% Similarity=0.118 Sum_probs=76.2
Q ss_pred ccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeE-EEeCCCCC
Q 012083 12 SLNKTNVHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVR-IVPLPDGL 88 (471)
Q Consensus 12 ~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~ 88 (471)
.|+...+||+++-..+.|++.-..++.++|+++ +.+|++++.+.+.+.++.. +.+. ++.++..
T Consensus 3 ~~~l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~-------------p~vd~vi~~~~~- 68 (349)
T 3tov_A 3 AMELDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN-------------PNIDELIVVDKK- 68 (349)
T ss_dssp SCCCTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC-------------TTCSEEEEECCS-
T ss_pred CcCCCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC-------------CCccEEEEeCcc-
Confidence 344566899999999999999999999999987 9999999999988877643 2443 4444321
Q ss_pred CCCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCe-eEEEECCCcchHHHHHHHcCCceEE
Q 012083 89 EPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKI-TCVIADVTFGWALQVAAKLELKKAS 153 (471)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~p-D~vV~D~~~~~~~~~A~~lgiP~v~ 153 (471)
.....+. .+.+++..++. .++ |++|.-....-...++...|+|..+
T Consensus 69 -------~~~~~~~--------~~~~l~~~Lr~----~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 -------GRHNSIS--------GLNEVAREINA----KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp -------SHHHHHH--------HHHHHHHHHHH----HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred -------cccccHH--------HHHHHHHHHhh----CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 1111111 12234455554 789 9999655555566788889999765
No 52
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.78 E-value=0.00035 Score=73.23 Aligned_cols=147 Identities=15% Similarity=0.088 Sum_probs=96.4
Q ss_pred CCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHh--hCCCcEEEeccchhhhh-ccC
Q 012083 285 PGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAK--VADFGKMVKWAPQEKVL-AHP 361 (471)
Q Consensus 285 ~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~--~~~nv~~~~~vpq~~lL-~~~ 361 (471)
+..+||.||.+....+++.+..-.+.|++.+...+|....... ....+-..+.+. .++++.+.+.+|..+-| .+.
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~--~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~ 598 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV--GEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQ 598 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG--GHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGG
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH--HHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhC
Confidence 3469999999999999999999999999999999998865410 000111111110 14667788888865433 223
Q ss_pred cceeeee---ccCcchhhHhhhcCCceeecccc-cchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHH
Q 012083 362 SVACYLT---HCGWNSTMEGISMGVPFLCWPWG-HDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVV 437 (471)
Q Consensus 362 ~~~~~It---HgG~~s~~eal~~GvP~l~~P~~-~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~ 437 (471)
.+++++- .+|.+|++|||++|||+|.++-. .=-..-+..+.. .|+...+-. +.++-.+..-++-+|++.
T Consensus 599 ~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia~------~~~~Y~~~a~~la~d~~~ 671 (723)
T 4gyw_A 599 LADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIAK------NRQEYEDIAVKLGTDLEY 671 (723)
T ss_dssp GCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBCS------SHHHHHHHHHHHHHCHHH
T ss_pred CCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCcccccC------CHHHHHHHHHHHhcCHHH
Confidence 3444764 89999999999999999999832 222333445555 577766642 555555555566677654
Q ss_pred HHH
Q 012083 438 RKN 440 (471)
Q Consensus 438 ~~~ 440 (471)
+++
T Consensus 672 l~~ 674 (723)
T 4gyw_A 672 LKK 674 (723)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 53
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.63 E-value=0.00022 Score=59.72 Aligned_cols=137 Identities=17% Similarity=0.183 Sum_probs=79.5
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHhCCC--CE-EEEEcCCCCCCCCCCCCch---hHHhhCCCcEEEeccchh---hh
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLELAGQ--PF-LCGVRPGFINGSSTNNPDG---LVAKVADFGKMVKWAPQE---KV 357 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~--~~-i~~~~~~~~~~~~~~lp~~---~~~~~~~nv~~~~~vpq~---~l 357 (471)
+++++..|+... ...+..+++++..+.. .+ ++.++.. ...+. ..++.+.++.+ +|+|+. .+
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g-------~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~ 71 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKG-------PDEKKIKLLAQKLGVKAEF-GFVNSNELLEI 71 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCS-------TTHHHHHHHHHHHTCEEEC-CCCCHHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCC-------ccHHHHHHHHHHcCCeEEE-eecCHHHHHHH
Confidence 477778887633 2335566667765531 22 2333322 11122 22233457778 999864 57
Q ss_pred hccCcceeeee----ccCcchhhHhhhcCC-ceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHh
Q 012083 358 LAHPSVACYLT----HCGWNSTMEGISMGV-PFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELL 432 (471)
Q Consensus 358 L~~~~~~~~It----HgG~~s~~eal~~Gv-P~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll 432 (471)
++.+++ +|. -|..+++.||+++|+ |+|+.... ......+.. -+. .+. .-+.+++.++|.+++
T Consensus 72 ~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~---~~~~~~~~~-~~~--~~~-----~~~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 72 LKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPL---SATRQFALD-ERS--LFE-----PNNAKDLSAKIDWWL 138 (166)
T ss_dssp HTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTT---CGGGGGCSS-GGG--EEC-----TTCHHHHHHHHHHHH
T ss_pred HHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCC---CchhhhccC-Cce--EEc-----CCCHHHHHHHHHHHH
Confidence 877776 664 244569999999996 99994321 111112222 132 332 237899999999999
Q ss_pred CcHHHHHHHHHHHH
Q 012083 433 SNDVVRKNALKLKE 446 (471)
Q Consensus 433 ~~~~~~~~a~~l~~ 446 (471)
+|++.+++..+-+.
T Consensus 139 ~~~~~~~~~~~~~~ 152 (166)
T 3qhp_A 139 ENKLERERMQNEYA 152 (166)
T ss_dssp HCHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHH
Confidence 99865554444333
No 54
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=97.60 E-value=0.042 Score=55.37 Aligned_cols=134 Identities=11% Similarity=0.086 Sum_probs=70.9
Q ss_pred EEEEecCccccCCHHHHHHHHHHHH---hCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchh---hhhccC
Q 012083 288 VIYAAFGSISKLSQQQFNELALGLE---LAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQE---KVLAHP 361 (471)
Q Consensus 288 vv~vs~GS~~~~~~~~~~~~~~al~---~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~---~lL~~~ 361 (471)
++++..|.+.. ...+..+++|+. +.+.++++...+. +.....-.......+.++.+....+.. .+++.+
T Consensus 328 p~i~~vgRl~~--~Kg~~~li~a~~~l~~~~~~l~l~G~G~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 402 (536)
T 3vue_A 328 PLIAFIGRLEE--QKGPDVMAAAIPELMQEDVQIVLLGTGK---KKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGA 402 (536)
T ss_dssp CEEEEECCBSG--GGCHHHHHHHHHHHTTSSCEEEEECCBC---HHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHC
T ss_pred cEEEEEeeccc--cCChHHHHHHHHHhHhhCCeEEEEeccC---chHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhh
Confidence 55666777532 222444444443 3455555444322 000000011223347888888777754 467666
Q ss_pred cceeeeecc---C-cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCC-----CCCcCHhHHHHHHHHHh
Q 012083 362 SVACYLTHC---G-WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDD-----NGIIGRHEIKRKVDELL 432 (471)
Q Consensus 362 ~~~~~ItHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~-----~~~~~~~~l~~~i~~ll 432 (471)
++ ||.-. | -.+++||+++|+|+|+.... -....+.+. .-|....... -...+.++|.++|+++|
T Consensus 403 D~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral 475 (536)
T 3vue_A 403 DV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRAI 475 (536)
T ss_dssp SE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHHH
T ss_pred he--eecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHHH
Confidence 66 66532 3 35889999999999987542 233333331 2333222100 02235688999998877
Q ss_pred C
Q 012083 433 S 433 (471)
Q Consensus 433 ~ 433 (471)
.
T Consensus 476 ~ 476 (536)
T 3vue_A 476 K 476 (536)
T ss_dssp H
T ss_pred H
Confidence 4
No 55
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.44 E-value=0.0015 Score=56.32 Aligned_cols=86 Identities=9% Similarity=0.017 Sum_probs=62.9
Q ss_pred CcEE-Eeccchh---hhhccCcceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCC
Q 012083 345 FGKM-VKWAPQE---KVLAHPSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDN 416 (471)
Q Consensus 345 nv~~-~~~vpq~---~lL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~ 416 (471)
++.+ .+++++. .+++.+++ +|.. |..+++.||+++|+|+|+... ..+...+ . -+.|..++.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~-~~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-T-NETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-C-TTTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-C-CCceEEecC---
Confidence 8999 8999953 67877777 6643 235688999999999998754 3344455 5 367888853
Q ss_pred CCcCHhHHHHHHHHHhC-cHHHHHHHHH
Q 012083 417 GIIGRHEIKRKVDELLS-NDVVRKNALK 443 (471)
Q Consensus 417 ~~~~~~~l~~~i~~ll~-~~~~~~~a~~ 443 (471)
-+.+++.++|.++++ |++.+++..+
T Consensus 165 --~~~~~l~~~i~~l~~~~~~~~~~~~~ 190 (200)
T 2bfw_A 165 --GDPGELANAILKALELSRSDLSKFRE 190 (200)
T ss_dssp --TCHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 378999999999999 9865544433
No 56
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.13 E-value=0.00099 Score=62.97 Aligned_cols=108 Identities=13% Similarity=0.111 Sum_probs=77.8
Q ss_pred CcEEEeccchhhh---hccCcceeeeeccCc---------chhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeec
Q 012083 345 FGKMVKWAPQEKV---LAHPSVACYLTHCGW---------NSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLE 412 (471)
Q Consensus 345 nv~~~~~vpq~~l---L~~~~~~~~ItHgG~---------~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~ 412 (471)
||.+.+|+|+.++ |+..+.+++.+-+.. +-+.|+|++|+|+|+.+ ...++..+.+ .|+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~-~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIEN-NGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHH-HTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHh-CCeEEEeC
Confidence 8999999998754 544555545433322 35789999999999754 5678888889 59999994
Q ss_pred CCCCCCcCHhHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHH
Q 012083 413 PDDNGIIGRHEIKRKVDELLSND--VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQ 468 (471)
Q Consensus 413 ~~~~~~~~~~~l~~~i~~ll~~~--~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 468 (471)
+.+++.+++..+..++ ++++|+++.++++++ |-...+.+.+.+.+
T Consensus 290 -------~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQ 336 (339)
T ss_dssp -------SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHH
Confidence 4688999998876443 678888888888765 55555555555444
No 57
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=96.84 E-value=0.014 Score=54.70 Aligned_cols=46 Identities=20% Similarity=0.194 Sum_probs=41.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHh
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFICERIKES 63 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~ 63 (471)
|||+++-..+.|++.-..++.++|+++ +.+|++++.+.+.+.+...
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~ 48 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWH 48 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTS
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcC
Confidence 599999999999999999999999987 9999999999988877643
No 58
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=93.44 E-value=0.14 Score=45.34 Aligned_cols=113 Identities=12% Similarity=0.108 Sum_probs=65.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccH
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDE 97 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 97 (471)
||||+.-=-+. |.--+.+|+++|.+.| +|+++.+...+.-.-.+. .....+++..+..... ..-...+
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si---------t~~~pl~~~~~~~~~~-~~v~GTP 69 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL---------TFTEPLKMRKIDTDFY-TVIDGTP 69 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC---------CCSSCEEEEEEETTEE-EETTCCH
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccce---------ecCCCeEEEEecCCCe-EEECCCH
Confidence 78887653333 4455788999999988 999999987766554321 2233566665543210 0011122
Q ss_pred HHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEEC----------CCcc---hHHHHHHHcCCceEEEeC
Q 012083 98 AKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIAD----------VTFG---WALQVAAKLELKKASIYT 156 (471)
Q Consensus 98 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D----------~~~~---~~~~~A~~lgiP~v~~~~ 156 (471)
.+ |-.+. +..++. . .+||+||+. .+++ +|+.-|..+|||.|.+|.
T Consensus 70 aD-CV~la------l~~l~~---~----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 70 AD-CVHLG------YRVILE---E----KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HH-HHHHH------HHTTTT---T----CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HH-HHHHH------HHHhcC---C----CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 11 11111 112221 1 589999963 3333 456677899999999875
No 59
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=92.47 E-value=0.11 Score=46.10 Aligned_cols=113 Identities=19% Similarity=0.127 Sum_probs=63.7
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcc
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRK 95 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 95 (471)
++||||+.-=-+. +---+.+|+++|.+ +|+|+++.+...+.-.-.+. .....+++..+.++. ..-..
T Consensus 10 ~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~si---------Tl~~pl~~~~~~~~~--~~v~G 76 (261)
T 3ty2_A 10 PKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASNSL---------TLNAPLHIKNLENGM--ISVEG 76 (261)
T ss_dssp -CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTTCC---------CCSSCEEEEECTTSC--EEESS
T ss_pred CCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCcccce---------ecCCCeEEEEecCCe--EEECC
Confidence 3589888764333 44557788999987 89999999987776544321 223356776654321 00011
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEEC----------CCcch---HHHHHHHcCCceEEEeC
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIAD----------VTFGW---ALQVAAKLELKKASIYT 156 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D----------~~~~~---~~~~A~~lgiP~v~~~~ 156 (471)
.+.+ |-.+ -+..+.. .+||+||+. ..++. |+.-|..+|||.|.+|.
T Consensus 77 TPaD-CV~l----------al~~l~~----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 135 (261)
T 3ty2_A 77 TPTD-CVHL----------AITGVLP----EMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSL 135 (261)
T ss_dssp CHHH-HHHH----------HTTTTSS----SCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEE
T ss_pred CHHH-HHHH----------HHHHhcC----CCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEc
Confidence 2211 1111 1122222 689999963 22332 23344678999999875
No 60
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=90.92 E-value=0.77 Score=40.79 Aligned_cols=112 Identities=13% Similarity=0.146 Sum_probs=61.7
Q ss_pred cEEEEEcCCCcccH-HHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCccc
Q 012083 18 VHVLLVSFPAQGHV-ASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKD 96 (471)
Q Consensus 18 ~~Il~~~~~~~GH~-~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 96 (471)
.|||+.- --|-. --+.+|+++|.+.|| |+++.+...+.-.-.+. +....+++..+...... .-.+.
T Consensus 2 p~ILlTN--DDGi~apGi~~L~~~l~~~g~-V~VvAP~~~~Sg~g~si---------T~~~pl~~~~~~~~~~~-~v~GT 68 (251)
T 2wqk_A 2 PTFLLVN--DDGYFSPGINALREALKSLGR-VVVVAPDRNLSGVGHSL---------TFTEPLKMRKIDTDFYT-VIDGT 68 (251)
T ss_dssp CEEEEEC--SSCTTCHHHHHHHHHHTTTSE-EEEEEESSCCTTSCCSC---------CCSSCEEEEEEETTEEE-ETTCC
T ss_pred CEEEEEc--CCCCCcHHHHHHHHHHHhCCC-EEEEeeCCCCcccccCc---------CCCCCceeEEeecccee-ecCCC
Confidence 6777654 33323 346788999999984 88888877665443221 22335666544321000 00112
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEE----------CCCcc---hHHHHHHHcCCceEEEeC
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIA----------DVTFG---WALQVAAKLELKKASIYT 156 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~----------D~~~~---~~~~~A~~lgiP~v~~~~ 156 (471)
+.+ |-.+. +..++. + .+||+||+ |..++ +|+.-|..+|||.|.+|.
T Consensus 69 PaD-CV~la------l~~~l~---~----~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 69 PAD-CVHLG------YRVILE---E----KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHH-HHHHH------HHTTTT---T----CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred hHH-HHhhh------hhhhcC---C----CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 221 11111 112222 2 68999997 33333 566777899999999874
No 61
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=90.71 E-value=2.2 Score=39.41 Aligned_cols=35 Identities=11% Similarity=0.176 Sum_probs=25.1
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 15 KTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 15 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|++|||+|+..+.. .+...++|.++||+|..+.+.
T Consensus 5 ~~~mrivf~Gt~~f-----a~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGTPDF-----AARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECCSHH-----HHHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEcC
Confidence 35799999987643 345568888899999866663
No 62
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=90.31 E-value=2.4 Score=35.95 Aligned_cols=98 Identities=10% Similarity=0.016 Sum_probs=63.5
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc------hhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFI------CERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEP 90 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 90 (471)
+-.|++++..+.|=..-.+++|.+.+.+|++|.|+..-.. ...+... ++++.....++..
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L--------------~v~~~~~g~gf~~ 93 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH--------------GVEFQVMATGFTW 93 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG--------------TCEEEECCTTCCC
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC--------------CcEEEEccccccc
Confidence 3468888888899999999999999999999999955432 1222222 5778777664432
Q ss_pred CCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc
Q 012083 91 EDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG 138 (471)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~ 138 (471)
. ..+..+ -.......+....+.+.. .++|+||.|-...
T Consensus 94 ~--~~~~~~----~~~~a~~~l~~a~~~l~~----~~yDlvILDEi~~ 131 (196)
T 1g5t_A 94 E--TQNREA----DTAACMAVWQHGKRMLAD----PLLDMVVLDELTY 131 (196)
T ss_dssp C--GGGHHH----HHHHHHHHHHHHHHHTTC----TTCSEEEEETHHH
T ss_pred C--CCCcHH----HHHHHHHHHHHHHHHHhc----CCCCEEEEeCCCc
Confidence 2 111111 111224445555555544 7999999998754
No 63
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=90.02 E-value=1.4 Score=45.00 Aligned_cols=46 Identities=17% Similarity=0.112 Sum_probs=33.1
Q ss_pred CCcEEE---eccchh---------hhhccCcceeeeecc---C-cchhhHhhhcCCceeecccc
Q 012083 344 DFGKMV---KWAPQE---------KVLAHPSVACYLTHC---G-WNSTMEGISMGVPFLCWPWG 391 (471)
Q Consensus 344 ~nv~~~---~~vpq~---------~lL~~~~~~~~ItHg---G-~~s~~eal~~GvP~l~~P~~ 391 (471)
++|+++ .|++.. .+++.+++ ||.-. | -.+.+||+++|+|+|+.-..
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 566654 888764 47877777 66543 3 45899999999999987553
No 64
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=88.11 E-value=1.5 Score=38.80 Aligned_cols=113 Identities=9% Similarity=0.077 Sum_probs=63.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCC-CC-CCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLE-PE-DDRK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~-~~~~ 95 (471)
||||+.-=-+. |---+.+|+++|++.| +|+++.+...+.-+-.+. .....+++..+..+-. .. .-..
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si---------Tl~~pl~~~~~~~~~~~~~~~v~G 69 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSI---------TIHVPLWMKKVFISERVVAYSTTG 69 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC---------CCSSCCCEEECCCSSSEEEEEESS
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc---------cCCCCeEEEEeccCCCCceEEECC
Confidence 46665542222 3344788999999888 899999987766554331 2223566666543200 00 0011
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEEC----------CCcc---hHHHHHHHcCCceEEEeC
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIAD----------VTFG---WALQVAAKLELKKASIYT 156 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D----------~~~~---~~~~~A~~lgiP~v~~~~ 156 (471)
.+.+ ++.--+..+.. .+||+||+. ..++ +|+.-|..+|||.|.++.
T Consensus 70 TPaD-----------CV~lal~~l~~----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 70 TPAD-----------CVKLAYNVVMD----KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp CHHH-----------HHHHHHHTTST----TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred cHHH-----------HHHHHHHhhcc----CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 1211 11111222322 689999963 2322 456677889999999975
No 65
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=87.71 E-value=1.4 Score=39.71 Aligned_cols=113 Identities=12% Similarity=-0.022 Sum_probs=63.1
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC-CCccc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE-DDRKD 96 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~ 96 (471)
||||+.-=-+. +---+.+|+++|++.| +|+++.+...+.-+-.+. .....+++..++.+-... .-.+.
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~si---------Tl~~pl~~~~~~~~~~~~~~v~GT 69 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGI---------TLHKPLRMYEVDLCGFRAIATSGT 69 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSC---------CCSSCBCEEEEECSSSEEEEESSC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc---------cCCCCeEEEEeccCCCceEEECCc
Confidence 46666542222 3344788999999988 899999987766543321 222345555543210000 00112
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEEC-----------CCcc---hHHHHHHHcCCceEEEeCc
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIAD-----------VTFG---WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D-----------~~~~---~~~~~A~~lgiP~v~~~~~ 157 (471)
+.+ ++.--+..+ . .+||+||+. .+++ +|+.-|..+|||.|.++..
T Consensus 70 PaD-----------CV~lal~~l-~----~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 70 PSD-----------TVYLATFGL-G----RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp HHH-----------HHHHHHHHH-T----SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHH-----------HHHHHHhcC-C----CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 211 111122333 3 699999963 2222 4566678899999999864
No 66
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=87.59 E-value=2 Score=40.21 Aligned_cols=45 Identities=13% Similarity=0.180 Sum_probs=35.9
Q ss_pred cCCCCcEEEEEc-CCCcccHHHHHHHHHHHH--hCCCeEEEEeCCcch
Q 012083 13 LNKTNVHVLLVS-FPAQGHVASLMKLAHRLA--DCRIKVTFVTTEFIC 57 (471)
Q Consensus 13 m~~~~~~Il~~~-~~~~GH~~p~~~La~~L~--~rGh~Vt~~~~~~~~ 57 (471)
++.+.++|+|++ -|+-|=..-..+||..|+ ++|++|.++......
T Consensus 13 l~~~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~~ 60 (348)
T 3io3_A 13 VQHDSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPAH 60 (348)
T ss_dssp HTCTTCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSSC
T ss_pred hcCCCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCCC
Confidence 444456777665 467799999999999999 899999999987543
No 67
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=87.21 E-value=3.8 Score=34.61 Aligned_cols=82 Identities=13% Similarity=0.094 Sum_probs=52.8
Q ss_pred EEE-EE-cCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCccc
Q 012083 19 HVL-LV-SFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKD 96 (471)
Q Consensus 19 ~Il-~~-~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 96 (471)
|++ |. +-|+-|=..-...||..|+++|++|.++-.........-.. ....++.+.+.+.
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~~~~~---------~~~~~~~~~~~~~---------- 62 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSK---------AGKAAFDVFTAAS---------- 62 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHT---------TSCCSSEEEECCS----------
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHHHHHh---------cCCCCCcEEecCc----------
Confidence 544 44 34577889999999999999999999997654433322221 1122455544321
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCc
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTF 137 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~ 137 (471)
..+.+.++.+. .++|+||.|.-.
T Consensus 63 -------------~~l~~~l~~l~-----~~yD~viiD~~~ 85 (206)
T 4dzz_A 63 -------------EKDVYGIRKDL-----ADYDFAIVDGAG 85 (206)
T ss_dssp -------------HHHHHTHHHHT-----TTSSEEEEECCS
T ss_pred -------------HHHHHHHHHhc-----CCCCEEEEECCC
Confidence 34555666654 479999999753
No 68
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=86.85 E-value=6.5 Score=33.92 Aligned_cols=103 Identities=12% Similarity=0.071 Sum_probs=57.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCC--eEEEEe-CCcc---hhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRI--KVTFVT-TEFI---CERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE 91 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh--~Vt~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 91 (471)
|||+|+..++.+ .+.++.++|.+.+| +|..+. .+.. .+..++. |+.+..++..-
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~--------------gIp~~~~~~~~--- 61 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH--------------NVECKVIQRKE--- 61 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH--------------TCCEEECCGGG---
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc--------------CCCEEEeCccc---
Confidence 799998766653 46777888888888 766554 4322 2233434 77766543210
Q ss_pred CCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHHHcCCceEEEeCc
Q 012083 92 DDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~~ 157 (471)
..+ .....+.+.+.+++ .+||+||+-.+.. -...+-+...-.++=++++
T Consensus 62 --~~~--------r~~~~~~~~~~l~~-------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 62 --FPS--------KKEFEERMALELKK-------KGVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp --SSS--------HHHHHHHHHHHHHH-------TTCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred --ccc--------hhhhhHHHHHHHHh-------cCCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 000 01112223334444 8999999876533 3444445555567776654
No 69
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=86.79 E-value=3.6 Score=38.14 Aligned_cols=102 Identities=7% Similarity=-0.034 Sum_probs=56.7
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC-C-------cchhhhHHhhhcCCCCccCCCCCCeEEEeCCCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT-E-------FICERIKESRQLGSFSEMGDAQQLVRIVPLPDG 87 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 87 (471)
++|||+|+. --+....+.++|.++||+|..+.+ + ...+...+. |+.+.....
T Consensus 21 ~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~--------------gIpv~~~~~- 80 (329)
T 2bw0_A 21 QSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKD--------------GVPVFKYSR- 80 (329)
T ss_dssp CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHH--------------TCCEEECSC-
T ss_pred CCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHc--------------CCCEEecCc-
Confidence 358999993 224444677899999999886654 2 122233333 666655422
Q ss_pred CCCCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHHHcCCceEEEeCch
Q 012083 88 LEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-WALQVAAKLELKKASIYTSA 158 (471)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~~~ 158 (471)
+... ....+ ++++.++. .+||++|+-.+.. -...+-+.....++-++++.
T Consensus 81 ~~~~--------------~~~~~---~~~~~l~~----~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 81 WRAK--------------GQALP---DVVAKYQA----LGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp CEET--------------TEECH---HHHHHHHT----TCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred cccc--------------ccccH---HHHHHHHh----cCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 1000 01112 23333444 8999999876533 33444455556677777654
No 70
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=86.42 E-value=0.72 Score=39.44 Aligned_cols=50 Identities=18% Similarity=0.074 Sum_probs=38.7
Q ss_pred cccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 012083 11 ESLNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERI 60 (471)
Q Consensus 11 ~~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~ 60 (471)
++|..+++||++-..|+.+=+.=...+.+.|+++|++|.++.++.....+
T Consensus 1 ~~m~l~~k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 1 GHMNFAGKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp --CCCTTCEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTT
T ss_pred CCCCcCCCEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHH
Confidence 35666678999998888554437899999999999999999987665444
No 71
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=85.97 E-value=2.8 Score=36.90 Aligned_cols=111 Identities=14% Similarity=0.137 Sum_probs=63.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC-----
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED----- 92 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----- 92 (471)
||||+.-=-+. +---+.+|+++|++.| +|+++.+...+.-+-.+. .....+++..++.+.+..+
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si---------Tl~~pl~~~~~~~~~~~~~~~~~~ 69 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAI---------TIAHPVRAYPHPSPLHAPHFPAYR 69 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSC---------CCSSCBEEEECCCCTTSCCCCEEE
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc---------cCCCCeEEEEeccCcCCCCCceEE
Confidence 46666542222 3334778999999888 899999987765443321 2334677777754211000
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEEC----------CCcc---hHHHHHHHcCCceEEEeC
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIAD----------VTFG---WALQVAAKLELKKASIYT 156 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D----------~~~~---~~~~~A~~lgiP~v~~~~ 156 (471)
-...+.+ |-.+. +. + . .+||+||+. .+++ +|+.-|..+|||.|.++.
T Consensus 70 v~GTPaD-CV~la----------l~-l-~----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 70 VRGTPAD-CVALG----------LH-L-F----GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp EESCHHH-HHHHH----------HH-H-S----CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred EcCcHHH-HHHHH----------Hc-C-C----CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 0112221 11111 11 2 2 699999963 2322 456677889999999874
No 72
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=85.92 E-value=3.1 Score=34.08 Aligned_cols=45 Identities=20% Similarity=0.271 Sum_probs=37.9
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERI 60 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~ 60 (471)
++.||++.+.++-.|-....-++..|..+|++|.........+.+
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~l 61 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQV 61 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 457999999999999999999999999999999988765444333
No 73
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=85.62 E-value=2.6 Score=37.16 Aligned_cols=34 Identities=24% Similarity=0.388 Sum_probs=28.1
Q ss_pred cEEEEEcCC--CcccHHHHHHHHHHHHhCCCeEEEE
Q 012083 18 VHVLLVSFP--AQGHVASLMKLAHRLADCRIKVTFV 51 (471)
Q Consensus 18 ~~Il~~~~~--~~GH~~p~~~La~~L~~rGh~Vt~~ 51 (471)
+|.+|++.. .-|=..-.+.|++.|+++|.+|.++
T Consensus 21 ~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~f 56 (242)
T 3qxc_A 21 GHMLFISATNTNAGKTTCARLLAQYCNACGVKTILL 56 (242)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEE
Confidence 676666644 4578888999999999999999987
No 74
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=85.47 E-value=5 Score=34.56 Aligned_cols=108 Identities=8% Similarity=0.090 Sum_probs=57.9
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHHh-CCCeEEEEeCCcc----hhhhHHhhhcCCCCccCCCCCCeEEEeCCCC
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLAD-CRIKVTFVTTEFI----CERIKESRQLGSFSEMGDAQQLVRIVPLPDG 87 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~-rGh~Vt~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 87 (471)
|+.+++||+++..+..+.+. +|.++..+ .+++|..+.+... .+..++. |+.+..++..
T Consensus 1 ~~~~~~riavl~SG~Gsnl~---all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~--------------gIp~~~~~~~ 63 (215)
T 3tqr_A 1 MNREPLPIVVLISGNGTNLQ---AIIGAIQKGLAIEIRAVISNRADAYGLKRAQQA--------------DIPTHIIPHE 63 (215)
T ss_dssp ---CCEEEEEEESSCCHHHH---HHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHT--------------TCCEEECCGG
T ss_pred CCCCCcEEEEEEeCCcHHHH---HHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHc--------------CCCEEEeCcc
Confidence 56678999988877655544 44444444 3688887665322 1233333 7777665321
Q ss_pred CCCCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHHHcCCceEEEeCc
Q 012083 88 LEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~~ 157 (471)
-- .+-. ...+ ++++.+++ .+||+||+-.+.. -...+-+...-.++-++++
T Consensus 64 ~~-----~~r~--------~~d~---~~~~~l~~----~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 64 EF-----PSRT--------DFES---TLQKTIDH----YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp GS-----SSHH--------HHHH---HHHHHHHT----TCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred cc-----Cchh--------HhHH---HHHHHHHh----cCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 00 0000 0112 33344444 8999999876533 4445556666667776654
No 75
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=84.80 E-value=3.1 Score=40.98 Aligned_cols=106 Identities=8% Similarity=-0.022 Sum_probs=69.4
Q ss_pred CcEEEeccchh---hhhccCcceeeee---ccCcch-hhHhhhcC---CceeecccccchhhhHHHHHhhhc-ceeeecC
Q 012083 345 FGKMVKWAPQE---KVLAHPSVACYLT---HCGWNS-TMEGISMG---VPFLCWPWGHDHLYIKSCICDDWK-IGLWLEP 413 (471)
Q Consensus 345 nv~~~~~vpq~---~lL~~~~~~~~It---HgG~~s-~~eal~~G---vP~l~~P~~~DQ~~na~~v~~~~G-~G~~~~~ 413 (471)
.|++.+.+|+. .+++.+++ |+. .=|+|. ..|++++| .|+|+--+.+ .+ ++ +| -|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~---~~-l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AA---EV-LGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----TH---HH-HGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CH---HH-hCCCEEEECC
Confidence 57777888864 67777777 443 458875 58999996 5555443322 12 22 33 4778865
Q ss_pred CCCCCcCHhHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 414 DDNGIIGRHEIKRKVDELLSND--VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 414 ~~~~~~~~~~l~~~i~~ll~~~--~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
.+.++++++|.++|+++ +-+++.+++.+.+++ -....-.+.|++++.
T Consensus 423 -----~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 423 -----FDLVEQAEAISAALAAGPRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLA 471 (496)
T ss_dssp -----TBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHh
Confidence 47899999999999875 455555666665544 255666677777664
No 76
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=84.70 E-value=7.9 Score=33.70 Aligned_cols=103 Identities=12% Similarity=0.047 Sum_probs=58.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCC-cch---hhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTE-FIC---ERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE 91 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 91 (471)
|||+|+..++.+ .+.++.++|.+. +++|..+.+. ... +.+.+. |+.+..++..-
T Consensus 23 ~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~--------------gIp~~~~~~~~--- 82 (229)
T 3auf_A 23 IRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRA--------------GVDALHMDPAA--- 82 (229)
T ss_dssp EEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHT--------------TCEEEECCGGG---
T ss_pred cEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHc--------------CCCEEEECccc---
Confidence 899999766643 367777888876 6888755544 222 223333 78777553210
Q ss_pred CCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHHHcCCceEEEeCc
Q 012083 92 DDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~~ 157 (471)
..+- ....+.+.+.+++ .+||+||+-.+.. -...+-+.+.-.++=+.++
T Consensus 83 --~~~r--------~~~~~~~~~~l~~-------~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 83 --YPSR--------TAFDAALAERLQA-------YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp --SSSH--------HHHHHHHHHHHHH-------TTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred --ccch--------hhccHHHHHHHHh-------cCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 0000 1111223334444 8999999876633 4445556666667776653
No 77
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=84.13 E-value=12 Score=33.13 Aligned_cols=37 Identities=19% Similarity=0.269 Sum_probs=29.5
Q ss_pred CCCcEEEEEcCC--CcccHHHHHHHHHHHHhCCCeEEEE
Q 012083 15 KTNVHVLLVSFP--AQGHVASLMKLAHRLADCRIKVTFV 51 (471)
Q Consensus 15 ~~~~~Il~~~~~--~~GH~~p~~~La~~L~~rGh~Vt~~ 51 (471)
.++||.+|++.. .-|=..-.+.|++.|+++|++|.++
T Consensus 23 ~~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~f 61 (251)
T 3fgn_A 23 QSHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVC 61 (251)
T ss_dssp CSSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred ccCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEE
Confidence 345677666644 4578888999999999999999987
No 78
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=83.62 E-value=7.1 Score=34.05 Aligned_cols=38 Identities=13% Similarity=0.043 Sum_probs=32.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
|||+|..-|+-|=..-...||..|+++|++|.++=...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 58999777788999999999999999999999885443
No 79
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=83.37 E-value=7.5 Score=33.41 Aligned_cols=103 Identities=9% Similarity=0.020 Sum_probs=57.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCc-ch---hhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEF-IC---ERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE 91 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 91 (471)
+||.++-.++.+ .+.++.++|.+. +|+|..+.+.. .. +...+. |+.+..++..-
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~--------------gIp~~~~~~~~--- 63 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARE--------------NVPAFVFSPKD--- 63 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHT--------------TCCEEECCGGG---
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHc--------------CCCEEEeCccc---
Confidence 788888766644 366777888876 78987665542 22 223333 77766543210
Q ss_pred CCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHHHcCCceEEEeCc
Q 012083 92 DDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~~ 157 (471)
..+- ....+.+.+.+++ .+||+||+-.+.. -...+-+.+.-.++=++++
T Consensus 64 --~~~~--------~~~~~~~~~~l~~-------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 64 --YPSK--------AAFESEILRELKG-------RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp --SSSH--------HHHHHHHHHHHHH-------TTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred --ccch--------hhhHHHHHHHHHh-------cCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 0010 1112223333444 8999999876533 4445556666667776654
No 80
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=83.02 E-value=7.6 Score=35.65 Aligned_cols=34 Identities=15% Similarity=0.177 Sum_probs=24.1
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
++|||+|+..+..+ ....++|.+.||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeC
Confidence 35799999876432 45557777789999866554
No 81
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=82.39 E-value=1.8 Score=35.99 Aligned_cols=45 Identities=11% Similarity=0.034 Sum_probs=37.3
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHH
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKE 62 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~ 62 (471)
++||++...|+.|=+. ...+.+.|+++|++|.++.++.....+..
T Consensus 5 ~k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 5 GENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFING 49 (175)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSCH
T ss_pred CCEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhhH
Confidence 3689888888877665 88999999999999999999877765543
No 82
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=82.10 E-value=6 Score=37.70 Aligned_cols=38 Identities=13% Similarity=0.064 Sum_probs=27.8
Q ss_pred ccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 12 SLNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 12 ~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
.| ++.+||+++..+.. .+.+++++++.|++|.++..+.
T Consensus 3 ~m-~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~ 40 (403)
T 4dim_A 3 AM-YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPN 40 (403)
T ss_dssp ----CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSS
T ss_pred cc-cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCC
Confidence 34 34579999987754 3668999999999999997643
No 83
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=81.70 E-value=3.1 Score=36.88 Aligned_cols=111 Identities=14% Similarity=0.148 Sum_probs=62.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCc-cc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDR-KD 96 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~ 96 (471)
||||+.-=-+. |---+.+|+++|++.| +|+++.+...+.-+-.+. .....++...+... .-.-. ..
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~ai---------Tl~~Pl~~~~~~~~--~~~v~~GT 68 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASNSL---------TLESSLRTFTFDNG--DIAVQMGT 68 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC---------CCSSCCEEEECTTS--CEEEETCC
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccCCc---------CCCCCeEEEEeCCC--CeEECCCC
Confidence 57777643332 4444778999998876 999999988766554331 22235666655211 00011 22
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEEC----------CCcc---hHHHHHHHcCCceEEEeC
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIAD----------VTFG---WALQVAAKLELKKASIYT 156 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D----------~~~~---~~~~~A~~lgiP~v~~~~ 156 (471)
+.+ | +.--+..+.. .+||+||+. .+++ +|+.-|..+|||.|.++.
T Consensus 69 PaD-C----------V~lal~~ll~----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 69 PTD-C----------VYLGVNALMR----PRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp HHH-H----------HHHHHHTTSS----SCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred HHH-H----------HHHHHhhccC----CCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 221 1 1111222222 689999963 3333 344555679999999875
No 84
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=80.95 E-value=20 Score=28.86 Aligned_cols=37 Identities=11% Similarity=0.064 Sum_probs=30.0
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
..+++++..++. +.|++++++.|.++|.+|+++ ....
T Consensus 23 ~~~~llIaGG~G--ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 23 FGKILAIGAYTG--IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp CSEEEEEEETTH--HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CCeEEEEEccCc--HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 358888885553 999999999999999999998 5443
No 85
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=80.80 E-value=1 Score=41.53 Aligned_cols=47 Identities=15% Similarity=0.255 Sum_probs=30.6
Q ss_pred cccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhC-----C-CeEEEEeCCcchhhhHH
Q 012083 11 ESLNKTNVHVLLVSFPAQGHVASLMKLAHRLADC-----R-IKVTFVTTEFICERIKE 62 (471)
Q Consensus 11 ~~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~r-----G-h~Vt~~~~~~~~~~~~~ 62 (471)
.+|+.++|||+|+..|..|. .+|..|.+. | |+|+++..+...+.+.+
T Consensus 2 ~~m~~~~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~~ 54 (317)
T 2qyt_A 2 NAMNQQPIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIARGAHLEAIRA 54 (317)
T ss_dssp -----CCEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECCHHHHHHHHH
T ss_pred CCCCCCCCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEcHHHHHHHHh
Confidence 45666678999998777774 567888888 9 99999876333344443
No 86
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=79.87 E-value=8.4 Score=35.36 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
+|||+|+..+..+- ...++|.++||+|..+.+.
T Consensus 2 ~mrivf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~ 34 (314)
T 3tqq_A 2 SLKIVFAGTPQFAV-----PTLRALIDSSHRVLAVYTQ 34 (314)
T ss_dssp CCEEEEEECSGGGH-----HHHHHHHHSSSEEEEEECC
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEeC
Confidence 58999999886653 4567888899999877664
No 87
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=79.80 E-value=2.5 Score=36.22 Aligned_cols=46 Identities=15% Similarity=0.092 Sum_probs=39.6
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHh
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKES 63 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~ 63 (471)
++||++-..|+.|-+. ...|.+.|+++|++|.++.++.....+...
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~e 49 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMATE 49 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHHH
Confidence 3789999989988887 889999999999999999998887776643
No 88
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=78.67 E-value=2.7 Score=35.70 Aligned_cols=45 Identities=13% Similarity=0.186 Sum_probs=38.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCcchhhhHHh
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC-RIKVTFVTTEFICERIKES 63 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r-Gh~Vt~~~~~~~~~~~~~~ 63 (471)
|||++-..|+.|-+. ...+.+.|+++ |++|.++.++.....+...
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~~ 46 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIELE 46 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHHH
Confidence 589998888888776 89999999999 9999999998877766643
No 89
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=78.17 E-value=5.8 Score=38.15 Aligned_cols=37 Identities=16% Similarity=0.180 Sum_probs=26.6
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|..++.||+++..+-... -+.+++++.|++|+++...
T Consensus 1 M~~~~k~l~Il~~~~~~~-----~i~~aa~~lG~~vv~v~~~ 37 (425)
T 3vot_A 1 MTKRNKNLAIICQNKHLP-----FIFEEAERLGLKVTFFYNS 37 (425)
T ss_dssp -CCCCCEEEEECCCTTCC-----HHHHHHHHTTCEEEEEEET
T ss_pred CCCCCcEEEEECCChhHH-----HHHHHHHHCCCEEEEEECC
Confidence 677888999997554322 3567888899999988654
No 90
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=77.84 E-value=3.3 Score=32.81 Aligned_cols=45 Identities=13% Similarity=0.092 Sum_probs=37.4
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERI 60 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~ 60 (471)
++.||++.+.++-.|-....=++..|..+|++|...+.....+.+
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~ 46 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELF 46 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHH
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 457899999999999999999999999999999987665444433
No 91
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=77.63 E-value=3.9 Score=38.68 Aligned_cols=36 Identities=14% Similarity=0.016 Sum_probs=31.0
Q ss_pred cEEEEEcC-CCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 18 VHVLLVSF-PAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 18 ~~Il~~~~-~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
|+|+|++. ++-|-..-..++|..|+++|++|.++..
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 78877664 4668888999999999999999999988
No 92
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=77.28 E-value=6.9 Score=37.84 Aligned_cols=43 Identities=21% Similarity=0.257 Sum_probs=37.6
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhh
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICER 59 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~ 59 (471)
+..|+++..++.|=..-+..||..|+++|++|.++..+.++..
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~a 142 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPG 142 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTH
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchh
Confidence 4677888888999999999999999999999999998877553
No 93
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=76.74 E-value=17 Score=30.66 Aligned_cols=44 Identities=23% Similarity=0.245 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHH
Q 012083 110 GYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPG 160 (471)
Q Consensus 110 ~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 160 (471)
+.+++.++++++ .+.|+||.|. .+..+|+++|+|.+.+.++.-+
T Consensus 129 ~e~~~~i~~l~~----~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 129 DEITTLISKVKT----ENIKIVVSGK---TVTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp GGHHHHHHHHHH----TTCCEEEECH---HHHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHHHHH----CCCeEEECCH---HHHHHHHHcCCcEEEEecCHHH
Confidence 456777777777 8999999984 4678999999999998876554
No 94
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=75.98 E-value=12 Score=34.90 Aligned_cols=39 Identities=18% Similarity=0.169 Sum_probs=32.6
Q ss_pred cEEEEEc-CCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 18 VHVLLVS-FPAQGHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 18 ~~Il~~~-~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
++|+|++ -|+-|=..-..+||..|+++|++|.++..+..
T Consensus 26 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 26 TKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp CEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5565554 45779999999999999999999999998774
No 95
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=75.73 E-value=2.7 Score=35.98 Aligned_cols=50 Identities=26% Similarity=0.207 Sum_probs=37.5
Q ss_pred ccCCCCcEEEEEcCCCcccHHHHHHHHHHHHh-CCCeEEEEeCCcchhhhHH
Q 012083 12 SLNKTNVHVLLVSFPAQGHVASLMKLAHRLAD-CRIKVTFVTTEFICERIKE 62 (471)
Q Consensus 12 ~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~-rGh~Vt~~~~~~~~~~~~~ 62 (471)
.|..+++||++...|+.+=+. ...+.+.|.+ +|++|.++.++.....+..
T Consensus 14 ~~~l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~ 64 (206)
T 1qzu_A 14 PLMERKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFYSP 64 (206)
T ss_dssp --CCSSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSSCG
T ss_pred hcccCCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHhCH
Confidence 354567899999988888665 5899999999 8999999999887766543
No 96
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=75.02 E-value=18 Score=28.63 Aligned_cols=36 Identities=11% Similarity=0.091 Sum_probs=29.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
.+++++..++ =+.|++++++.|.++|.+|+++ ....
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R~ 54 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVTF 54 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEEE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 5888887554 3899999999999999999998 5544
No 97
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=74.67 E-value=16 Score=31.28 Aligned_cols=104 Identities=11% Similarity=0.037 Sum_probs=56.1
Q ss_pred cccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCc-c---hhhhHHhhhcCCCCccCCCCCCeEEEeC
Q 012083 11 ESLNKTNVHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEF-I---CERIKESRQLGSFSEMGDAQQLVRIVPL 84 (471)
Q Consensus 11 ~~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 84 (471)
+|| .+++||+++..+..+. +.+|.+++.+. +++|..+.+.. . .+...+. |+.+..+
T Consensus 3 ~~~-~~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~--------------gIp~~~~ 64 (215)
T 3kcq_A 3 GSM-KKELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSY--------------GIPTFVV 64 (215)
T ss_dssp -----CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHT--------------TCCEEEC
T ss_pred CCC-CCCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHc--------------CCCEEEe
Confidence 456 3357898877665443 45566666554 37888665532 2 1233333 7777665
Q ss_pred CCCCCCCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHHHcCCceEEEeCc
Q 012083 85 PDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~~ 157 (471)
+.. ...+ +.+.+.+++ .+||+||+-.+.. -...+-+...-.++=++++
T Consensus 65 ~~~-----~~~~-------------~~~~~~L~~-------~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 65 KRK-----PLDI-------------EHISTVLRE-------HDVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp CBT-----TBCH-------------HHHHHHHHH-------TTCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred Ccc-----cCCh-------------HHHHHHHHH-------hCCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 321 0000 223344444 8999999876643 4445556666667776653
No 98
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=74.25 E-value=40 Score=31.08 Aligned_cols=41 Identities=22% Similarity=0.258 Sum_probs=34.1
Q ss_pred cEEEEEc-CCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 012083 18 VHVLLVS-FPAQGHVASLMKLAHRLADCRIKVTFVTTEFICE 58 (471)
Q Consensus 18 ~~Il~~~-~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~ 58 (471)
++|+|++ -|+-|=..-..++|..|+++|++|.++..+....
T Consensus 16 ~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~~ 57 (334)
T 3iqw_A 16 LRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAHN 57 (334)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSCH
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCCC
Confidence 5776665 4677999999999999999999999999885544
No 99
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=73.58 E-value=8.4 Score=37.83 Aligned_cols=104 Identities=15% Similarity=0.161 Sum_probs=63.6
Q ss_pred cEE-Eeccchh---hhhccCcceeeee---ccCcc-hhhHhhhcCC-----ceeecccccchhhhHHHHHhhhcceeeec
Q 012083 346 GKM-VKWAPQE---KVLAHPSVACYLT---HCGWN-STMEGISMGV-----PFLCWPWGHDHLYIKSCICDDWKIGLWLE 412 (471)
Q Consensus 346 v~~-~~~vpq~---~lL~~~~~~~~It---HgG~~-s~~eal~~Gv-----P~l~~P~~~DQ~~na~~v~~~~G~G~~~~ 412 (471)
+.+ .+++|+. .+++.+++ ||. .=|.| ++.||+++|+ |+|+--+.+ .+ .+ +.-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~---~~-l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AA---NE-LTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GG---GT-CTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CH---HH-hCCeEEEC
Confidence 553 4888876 56777777 654 33554 8899999998 666554322 11 11 22356665
Q ss_pred CCCCCCcCHhHHHHHHHHHhCcH-H-HHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012083 413 PDDNGIIGRHEIKRKVDELLSND-V-VRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469 (471)
Q Consensus 413 ~~~~~~~~~~~l~~~i~~ll~~~-~-~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 469 (471)
+ .+.++++++|.++|+++ + -+++.+++.+.+++ -+.....+.+++.+
T Consensus 403 p-----~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l 451 (482)
T 1uqt_A 403 P-----YDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-----NDINHWQECFISDL 451 (482)
T ss_dssp T-----TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHH
T ss_pred C-----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHH
Confidence 4 47799999999999863 3 33444444444433 24555666666655
No 100
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=73.45 E-value=15 Score=30.36 Aligned_cols=78 Identities=13% Similarity=0.009 Sum_probs=43.9
Q ss_pred EEEeccchh-hhhccCcceeeeeccCcchhhHh---hhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHh
Q 012083 347 KMVKWAPQE-KVLAHPSVACYLTHCGWNSTMEG---ISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRH 422 (471)
Q Consensus 347 ~~~~~vpq~-~lL~~~~~~~~ItHgG~~s~~ea---l~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~ 422 (471)
.+++..+.. .++..-+-..++--||.||..|+ +.+++|++.+|.+. .....+... -.....- .-+.+
T Consensus 92 i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~~-----~~~~~ 162 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVHV-----AADVA 162 (176)
T ss_dssp EECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEEE-----ESSHH
T ss_pred EEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEEE-----cCCHH
Confidence 344666653 44433333457778999986654 77999999999832 111122221 1222221 12667
Q ss_pred HHHHHHHHHhC
Q 012083 423 EIKRKVDELLS 433 (471)
Q Consensus 423 ~l~~~i~~ll~ 433 (471)
++.+.+.+.+.
T Consensus 163 e~~~~l~~~~~ 173 (176)
T 2iz6_A 163 GAIAAVKQLLA 173 (176)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777776653
No 101
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=73.09 E-value=24 Score=30.75 Aligned_cols=38 Identities=18% Similarity=0.218 Sum_probs=30.3
Q ss_pred cEEEEEc--CCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVS--FPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~--~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
+|++.+. -++-|=..-...||..|+++|++|.++=...
T Consensus 2 ~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 5665554 3466889999999999999999999986554
No 102
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=72.63 E-value=26 Score=32.09 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=25.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
|||+|+..+..+ +...++|.++||+|..+.+..
T Consensus 5 mrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 5 IKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp SEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred eEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 999999988654 345677888899998776643
No 103
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=72.59 E-value=5.1 Score=33.74 Aligned_cols=44 Identities=23% Similarity=0.200 Sum_probs=37.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHH
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKE 62 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~ 62 (471)
+||++...|+.|-+ =...+.+.|.++|++|.++.++.....+..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 68999999998866 478899999999999999999887777665
No 104
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=72.20 E-value=31 Score=34.14 Aligned_cols=33 Identities=12% Similarity=0.052 Sum_probs=23.6
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
..|++++. .-.-..+|++.|.+.|.+|..+.+.
T Consensus 364 GKrvaI~g-----d~~~~~~la~fL~elGm~vv~v~~~ 396 (523)
T 3u7q_B 364 GKRFALWG-----DPDFVMGLVKFLLELGCEPVHILCH 396 (523)
T ss_dssp TCEEEEEC-----SHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHcCCEEEEEEeC
Confidence 46888873 3344567888888899988877654
No 105
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=70.48 E-value=18 Score=32.97 Aligned_cols=32 Identities=6% Similarity=0.055 Sum_probs=22.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|||+|+..+. ......++|.++||+|..+.+.
T Consensus 1 mrivf~gt~~-----fa~~~L~~L~~~~~~i~~Vvt~ 32 (305)
T 2bln_A 1 MKTVVFAYHD-----MGCLGIEALLAAGYEISAIFTH 32 (305)
T ss_dssp CEEEEEECHH-----HHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEEEcCH-----HHHHHHHHHHHCCCcEEEEEcC
Confidence 5899986532 2345567788889999876654
No 106
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=70.43 E-value=20 Score=34.59 Aligned_cols=41 Identities=24% Similarity=0.314 Sum_probs=35.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCcchh
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC-RIKVTFVTTEFICE 58 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r-Gh~Vt~~~~~~~~~ 58 (471)
..|+|+..++.|=..-...||..|+++ |++|.++....+..
T Consensus 101 ~vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r~ 142 (433)
T 2xxa_A 101 AVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRP 142 (433)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSST
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCCc
Confidence 456777778889999999999999999 99999998886654
No 107
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=70.28 E-value=4.5 Score=34.62 Aligned_cols=44 Identities=9% Similarity=-0.063 Sum_probs=31.4
Q ss_pred CCcEEEEEcCCCcccHHH-HHHHHHHHHhCCCeEEEEeCCcchhhh
Q 012083 16 TNVHVLLVSFPAQGHVAS-LMKLAHRLADCRIKVTFVTTEFICERI 60 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p-~~~La~~L~~rGh~Vt~~~~~~~~~~~ 60 (471)
+++||++...|+. ...- ...+.+.|+++|++|.++.++.....+
T Consensus 4 ~~k~IllgiTGsi-aayk~~~~ll~~L~~~g~eV~vv~T~~A~~vl 48 (207)
T 3mcu_A 4 KGKRIGFGFTGSH-CTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTN 48 (207)
T ss_dssp TTCEEEEEECSCG-GGGTTSHHHHHHHHHTTCEEEEEECC------
T ss_pred CCCEEEEEEEChH-HHHHHHHHHHHHHHhCCCEEEEEEehHHHHHH
Confidence 4578988888874 4443 789999999999999999987765433
No 108
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=70.23 E-value=8.8 Score=30.15 Aligned_cols=44 Identities=9% Similarity=-0.013 Sum_probs=32.2
Q ss_pred cEEEEEcCCC---cccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhH
Q 012083 18 VHVLLVSFPA---QGHVASLMKLAHRLADCRIKVTFVTTEFICERIK 61 (471)
Q Consensus 18 ~~Il~~~~~~---~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~ 61 (471)
+|++|+-..+ .......+.+|...++.||+|+++-+..-...+.
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~l~ 62 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXLLD 62 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGGGB
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHHHh
Confidence 5665555443 4567778888999999999999888776665444
No 109
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=70.15 E-value=20 Score=30.62 Aligned_cols=102 Identities=13% Similarity=0.110 Sum_probs=58.1
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcc----hhhhHHhhhcCCCCccCCCCCCeEEEeCCC-CCCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFI----CERIKESRQLGSFSEMGDAQQLVRIVPLPD-GLEP 90 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 90 (471)
|||+++..+..+ -+.+|.+++.+. +|+|..+.+... .+...+. |+.+..++. .+.
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~--------------gIp~~~~~~~~~~- 62 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQA--------------GIATHTLIASAFD- 62 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHT--------------TCEEEECCGGGCS-
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHc--------------CCcEEEeCccccc-
Confidence 488888766654 366777777765 688876654432 1223333 787776532 110
Q ss_pred CCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHHHcCCceEEEeCc
Q 012083 91 EDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~~ 157 (471)
+- .... .++++.+++ .+||+||+-.+.. -...+-+...-.++-++++
T Consensus 63 -----~r--------~~~~---~~~~~~l~~----~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 63 -----SR--------EAYD---RELIHEIDM----YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp -----SH--------HHHH---HHHHHHHGG----GCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -----ch--------hhcc---HHHHHHHHh----cCCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 00 0111 233444554 8999999876633 4445556666677776654
No 110
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=70.15 E-value=11 Score=33.16 Aligned_cols=34 Identities=18% Similarity=0.118 Sum_probs=25.4
Q ss_pred CCeeEEEE-CCCcc-hHHHHHHHcCCceEEEeCchH
Q 012083 126 EKITCVIA-DVTFG-WALQVAAKLELKKASIYTSAP 159 (471)
Q Consensus 126 ~~pD~vV~-D~~~~-~~~~~A~~lgiP~v~~~~~~~ 159 (471)
..||+||+ |...- .+..=|.++|||+|.+..+..
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn~ 192 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDS 192 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTTS
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCC
Confidence 58898775 54332 678899999999999876543
No 111
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=69.81 E-value=34 Score=30.42 Aligned_cols=40 Identities=20% Similarity=0.289 Sum_probs=31.4
Q ss_pred CcEEEEEcC--CCcccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 17 NVHVLLVSF--PAQGHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 17 ~~~Il~~~~--~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
++|+++++. ++-|=..-...||..|++.|.+|.++-....
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 456655543 5778899999999999999999999866543
No 112
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=69.61 E-value=48 Score=30.31 Aligned_cols=38 Identities=13% Similarity=0.103 Sum_probs=32.0
Q ss_pred cEEEEEc-CCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVS-FPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~-~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
++|+|++ -|+-|=..-..+||..|+++|++|.++....
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4565554 5677999999999999999999999998876
No 113
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=69.56 E-value=25 Score=31.88 Aligned_cols=39 Identities=23% Similarity=0.390 Sum_probs=30.7
Q ss_pred CcEEEEEcC--CCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 17 NVHVLLVSF--PAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 17 ~~~Il~~~~--~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
++|+++++. ++-|=..-...||..|++.|.+|.++-...
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 445554443 577889999999999999999999986654
No 114
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=68.51 E-value=28 Score=31.28 Aligned_cols=40 Identities=18% Similarity=0.293 Sum_probs=31.0
Q ss_pred CcEEEEEc--CCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 17 NVHVLLVS--FPAQGHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 17 ~~~Il~~~--~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
+.|++.++ -++-|=..-...||..|++.|.+|.++-....
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 34554444 35778899999999999999999999966544
No 115
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=67.79 E-value=6.1 Score=36.76 Aligned_cols=42 Identities=17% Similarity=0.266 Sum_probs=36.1
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERI 60 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~ 60 (471)
=+++...|+.|=..-++.+|..++..|+.|.|++.....+.+
T Consensus 48 LiiIaG~pG~GKTt~al~ia~~~a~~g~~Vl~fSlEms~~ql 89 (338)
T 4a1f_A 48 LVIIGARPSMGKTSLMMNMVLSALNDDRGVAVFSLEMSAEQL 89 (338)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCEEEEEESSSCHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCCCHHHH
Confidence 367788899999999999999999999999999988765544
No 116
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=67.17 E-value=14 Score=35.91 Aligned_cols=87 Identities=15% Similarity=0.075 Sum_probs=54.3
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCccc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKD 96 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 96 (471)
.+|++++.. -.-..++++.|.+.|.+|..+.+....+...+. . ...+ ...+
T Consensus 313 Gkrv~i~~~-----~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~----------~-~~~v-------------~~~D 363 (458)
T 3pdi_B 313 SARTAIAAD-----PDLLLGFDALLRSMGAHTVAAVVPARAAALVDS----------P-LPSV-------------RVGD 363 (458)
T ss_dssp TCEEEEECC-----HHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTT----------T-SSCE-------------EESH
T ss_pred CCEEEEECC-----cHHHHHHHHHHHHCCCEEEEEEECCCChhhhhC----------c-cCcE-------------EeCC
Confidence 468888543 245578888998999999987765432222111 0 0000 0011
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEE
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASI 154 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~ 154 (471)
+. .+++++++ .+||++|.+.. ...+|+++|||++.+
T Consensus 364 ~~------------~le~~i~~-------~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 364 LE------------DLEHAARA-------GQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HH------------HHHHHHHH-------HTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HH------------HHHHHHHh-------cCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 11 14455555 79999999844 677999999999985
No 117
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=67.10 E-value=38 Score=33.49 Aligned_cols=35 Identities=14% Similarity=0.045 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
.+|++++. .-.-.++|++.|.+.|-+|..+.....
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~~ 394 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSHNA 394 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEETTC
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeCCC
Confidence 46888874 334567888888899998886655443
No 118
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=67.09 E-value=8.7 Score=32.84 Aligned_cols=46 Identities=11% Similarity=-0.008 Sum_probs=39.3
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhH
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIK 61 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~ 61 (471)
++.+|++.+.++-.|-....-++..|..+|++|.+++.....+.+.
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~ 132 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFV 132 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHH
Confidence 3568999999999999999999999999999999988765554443
No 119
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=67.06 E-value=7.5 Score=33.25 Aligned_cols=46 Identities=17% Similarity=0.173 Sum_probs=38.1
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHh
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKES 63 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~ 63 (471)
+++||++...|+.+-+. ...|.+.|+++| +|.++.++.....+...
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~~~ 63 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLDKL 63 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCCGG
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcCHH
Confidence 35799999999988776 899999999999 99999998877665533
No 120
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=66.98 E-value=33 Score=27.67 Aligned_cols=138 Identities=12% Similarity=0.080 Sum_probs=74.7
Q ss_pred EEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccC-cceee
Q 012083 288 VIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHP-SVACY 366 (471)
Q Consensus 288 vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~-~~~~~ 366 (471)
.|-|-+|| ..+....++....|+..+..+-+.+.+- ..+|+.+.+ |+... .+. ..+++
T Consensus 4 ~V~Iimgs--~SD~~v~~~a~~~l~~~gi~~ev~V~sa------HR~p~~~~~----------~~~~a---~~~~~~~Vi 62 (159)
T 3rg8_A 4 LVIILMGS--SSDMGHAEKIASELKTFGIEYAIRIGSA------HKTAEHVVS----------MLKEY---EALDRPKLY 62 (159)
T ss_dssp EEEEEESS--GGGHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHHH----------HHHHH---HTSCSCEEE
T ss_pred eEEEEECc--HHHHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHHH----------HHHHh---hhcCCCcEE
Confidence 56666676 3456667788888998898776555433 234444221 11111 111 24448
Q ss_pred eeccCcc----hhhHhhhcCCceeeccccc---chhh-hHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHH
Q 012083 367 LTHCGWN----STMEGISMGVPFLCWPWGH---DHLY-IKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVR 438 (471)
Q Consensus 367 ItHgG~~----s~~eal~~GvP~l~~P~~~---DQ~~-na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~ 438 (471)
|.=.|.- ++..++ .-+|+|.+|... +-.+ ++-.=.- -|+.+.-- .+.++..-++..| --+.|++++
T Consensus 63 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dLlS~vqmp-~GvpVatv---~~~~nAa~lA~~I-l~~~d~~l~ 136 (159)
T 3rg8_A 63 ITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGADIYSSLRMP-SGISPALV---LEPKNAALLAARI-FSLYDKEIA 136 (159)
T ss_dssp EEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTHHHHHHCCC-TTCCCEEC---CSHHHHHHHHHHH-HTTTCHHHH
T ss_pred EEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCccHHHHHhCC-CCCceEEe---cCchHHHHHHHHH-HhCCCHHHH
Confidence 8777744 333333 568999999632 1111 1111011 15543321 1444444444444 345688999
Q ss_pred HHHHHHHHHHHHHh
Q 012083 439 KNALKLKELAQKSV 452 (471)
Q Consensus 439 ~~a~~l~~~~~~~~ 452 (471)
++.+.+++..++.+
T Consensus 137 ~kl~~~r~~~~~~v 150 (159)
T 3rg8_A 137 DSVKSYMESNAQKI 150 (159)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999888887653
No 121
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=66.90 E-value=5 Score=37.23 Aligned_cols=42 Identities=17% Similarity=0.162 Sum_probs=31.6
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHh
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKES 63 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~ 63 (471)
.|||+|+-.|..|- .+|..|++.||+|+++......+.+.+.
T Consensus 3 ~mkI~IiGaG~~G~-----~~a~~L~~~g~~V~~~~r~~~~~~~~~~ 44 (335)
T 3ghy_A 3 LTRICIVGAGAVGG-----YLGARLALAGEAINVLARGATLQALQTA 44 (335)
T ss_dssp CCCEEEESCCHHHH-----HHHHHHHHTTCCEEEECCHHHHHHHHHT
T ss_pred CCEEEEECcCHHHH-----HHHHHHHHCCCEEEEEEChHHHHHHHHC
Confidence 48999998777664 5788999999999999875444444443
No 122
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=65.98 E-value=18 Score=35.08 Aligned_cols=43 Identities=23% Similarity=0.224 Sum_probs=36.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERI 60 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~ 60 (471)
-=+++...|+.|=..-++.+|...+.+|..|.+++.....+.+
T Consensus 198 ~liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ql 240 (444)
T 3bgw_A 198 NFVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKEN 240 (444)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTTHH
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHHHH
Confidence 3478888899999999999999999889999999988665543
No 123
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=65.42 E-value=6.5 Score=35.53 Aligned_cols=33 Identities=24% Similarity=0.332 Sum_probs=24.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|||++. |+.|-+- ..|++.|.++||+|+.++-.
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 587765 4555554 45789999999999998754
No 124
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=64.96 E-value=36 Score=28.95 Aligned_cols=105 Identities=8% Similarity=-0.045 Sum_probs=56.5
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCc--c--hhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEF--I--CERIKESRQLGSFSEMGDAQQLVRIVPLPDGLE 89 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 89 (471)
+++||+++..+..+. +.+|.+++.+. .++|..+.+.. . .+..++. |+.+..++..-
T Consensus 6 ~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~--------------gIp~~~~~~~~- 67 (209)
T 4ds3_A 6 KRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAA--------------GIATQVFKRKD- 67 (209)
T ss_dssp CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHT--------------TCCEEECCGGG-
T ss_pred CCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHc--------------CCCEEEeCccc-
Confidence 467898887666444 45666666654 37888665532 2 1233333 77776653210
Q ss_pred CCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHHHcCCceEEEeCc
Q 012083 90 PEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~~ 157 (471)
..+ .....+.+.+.+++ .+||+||+-.+.. -...+-+.+.-.++=++++
T Consensus 68 ----~~~--------r~~~d~~~~~~l~~-------~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 68 ----FAS--------KEAHEDAILAALDV-------LKPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp ----SSS--------HHHHHHHHHHHHHH-------HCCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred ----cCC--------HHHHHHHHHHHHHh-------cCCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 000 01112233344444 8999999876543 3444555555556666543
No 125
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=64.59 E-value=5.1 Score=32.15 Aligned_cols=34 Identities=15% Similarity=0.203 Sum_probs=26.9
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
++.||+++.. |++- ..+++.|.++||+|+++...
T Consensus 2 ~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 4578888843 5544 67899999999999999874
No 126
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=64.45 E-value=9.3 Score=35.12 Aligned_cols=40 Identities=23% Similarity=0.233 Sum_probs=31.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHh
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKES 63 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~ 63 (471)
|||+++..|+.|- .+|..|++.||+|+++.... .+.+.+.
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD-YETVKAK 42 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT-HHHHHHH
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh-HHHHHhC
Confidence 7999998887774 57888999999999998866 3556555
No 127
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=64.27 E-value=7.6 Score=34.37 Aligned_cols=44 Identities=16% Similarity=0.171 Sum_probs=36.6
Q ss_pred CCCcEEEEEcCC---CcccHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 012083 15 KTNVHVLLVSFP---AQGHVASLMKLAHRLADCRIKVTFVTTEFICE 58 (471)
Q Consensus 15 ~~~~~Il~~~~~---~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~ 58 (471)
++.||.+|++.+ +-|--.-...|+.-|..||++||..=.+++..
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlN 66 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYIN 66 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSC
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccccee
Confidence 367999999987 55777788899999999999999987776654
No 128
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=63.53 E-value=58 Score=26.40 Aligned_cols=145 Identities=14% Similarity=0.120 Sum_probs=79.5
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceee
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACY 366 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ 366 (471)
|.|-|-+|| ..+....++....|+..+..+-+.+.+- ...|+.+.+ |+.. +....++.+
T Consensus 6 p~V~IimgS--~SD~~v~~~a~~~l~~~gi~~ev~V~Sa------HRtp~~l~~----------~~~~---~~~~g~~Vi 64 (166)
T 3oow_A 6 VQVGVIMGS--KSDWSTMKECCDILDNLGIGYECEVVSA------HRTPDKMFD----------YAET---AKERGLKVI 64 (166)
T ss_dssp EEEEEEESS--GGGHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHHH----------HHHH---TTTTTCCEE
T ss_pred CeEEEEECc--HHhHHHHHHHHHHHHHcCCCEEEEEEcC------cCCHHHHHH----------HHHH---HHhCCCcEE
Confidence 456666776 4456667788888998998766555432 234444321 1111 111223458
Q ss_pred eeccCcc----hhhHhhhcCCceeecccccch------hhhHHHHHhhhcceeee-cCCCCCCcCHhHHHHHHHHHhCcH
Q 012083 367 LTHCGWN----STMEGISMGVPFLCWPWGHDH------LYIKSCICDDWKIGLWL-EPDDNGIIGRHEIKRKVDELLSND 435 (471)
Q Consensus 367 ItHgG~~----s~~eal~~GvP~l~~P~~~DQ------~~na~~v~~~~G~G~~~-~~~~~~~~~~~~l~~~i~~ll~~~ 435 (471)
|.=+|.. ++..+ ..-+|+|.+|...-. ..-.-+... |+++.. ..++.+.++..-++..| --+.|+
T Consensus 65 Ia~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~--gvpVatV~I~~ag~~nAa~lAa~I-l~~~d~ 140 (166)
T 3oow_A 65 IAGAGGAAHLPGMVAA-KTTLPVLGVPVKSSTLNGQDSLLSIVQMPA--GIPVATFAIGMAGAKNAALFAASI-LQHTDI 140 (166)
T ss_dssp EEEECSSCCHHHHHHH-TCSSCEEEEECCCTTTTTHHHHHHHHTCCT--TSCCEECCSTHHHHHHHHHHHHHH-HGGGCH
T ss_pred EEECCcchhhHHHHHh-ccCCCEEEeecCcCCCCCHHHHHHHhcCCC--CCceEEEecCCccchHHHHHHHHH-HcCCCH
Confidence 8777644 33333 346899999984321 111112222 544433 11000123333334333 345689
Q ss_pred HHHHHHHHHHHHHHHHhhcCC
Q 012083 436 VVRKNALKLKELAQKSVTKEG 456 (471)
Q Consensus 436 ~~~~~a~~l~~~~~~~~~~gg 456 (471)
+++++.+.+++..++.+.+..
T Consensus 141 ~l~~kl~~~r~~~~~~v~~~~ 161 (166)
T 3oow_A 141 NIAKALAEFRAEQTRFVLENP 161 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999988765543
No 129
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=63.36 E-value=12 Score=28.56 Aligned_cols=45 Identities=4% Similarity=-0.026 Sum_probs=32.7
Q ss_pred cCCCCcEEEEEcCCCcccH--HHHHHHHHHHHhCC--CeEEEEeCCcchh
Q 012083 13 LNKTNVHVLLVSFPAQGHV--ASLMKLAHRLADCR--IKVTFVTTEFICE 58 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~--~p~~~La~~L~~rG--h~Vt~~~~~~~~~ 58 (471)
|.++ +|++|+-+...-.. +..+..|....++| |+|.++.......
T Consensus 4 ~~~~-~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~ 52 (117)
T 2fb6_A 4 MSAN-DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASVK 52 (117)
T ss_dssp SSTT-SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHH
T ss_pred cccC-CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeee
Confidence 4444 78877776643333 44677888899999 8999998877766
No 130
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=63.23 E-value=11 Score=34.51 Aligned_cols=40 Identities=20% Similarity=0.175 Sum_probs=31.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHh
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKES 63 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~ 63 (471)
|||+++..|+.|- .+|..|++.||+|+++.... .+.+.+.
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIAGN 42 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHHHT
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHHhC
Confidence 6999999888884 46888999999999998866 3555544
No 131
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=62.97 E-value=22 Score=34.85 Aligned_cols=27 Identities=19% Similarity=0.019 Sum_probs=22.2
Q ss_pred CCeeEEEECCCcchHHHHHHHcCCceEEEe
Q 012083 126 EKITCVIADVTFGWALQVAAKLELKKASIY 155 (471)
Q Consensus 126 ~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~ 155 (471)
.+||++|... ....+|+++|||++.+.
T Consensus 400 ~~pDL~ig~~---~~~~~a~k~gIP~~~~~ 426 (483)
T 3pdi_A 400 YQADILIAGG---RNMYTALKGRVPFLDIN 426 (483)
T ss_dssp TTCSEEECCG---GGHHHHHHTTCCBCCCC
T ss_pred cCCCEEEECC---chhHHHHHcCCCEEEec
Confidence 8999999864 46678999999998653
No 132
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=62.81 E-value=11 Score=33.49 Aligned_cols=43 Identities=14% Similarity=-0.032 Sum_probs=37.2
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICE 58 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~ 58 (471)
++.+|++.+.++-.|-....-++..|..+|++|.+++.....+
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e 164 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAE 164 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSH
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 4679999999999999999999999999999999887544333
No 133
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=62.62 E-value=26 Score=34.78 Aligned_cols=33 Identities=18% Similarity=0.125 Sum_probs=25.4
Q ss_pred HHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEE
Q 012083 112 LEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASI 154 (471)
Q Consensus 112 ~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~ 154 (471)
++++++. .+||+++... ....+|+++|||++.+
T Consensus 448 l~~~i~~-------~~pDl~ig~~---~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 448 MEVVLEK-------LKPDMFFAGI---KEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHH-------HCCSEEEECH---HHHHHHHHTTCEEEET
T ss_pred HHHHHHh-------cCCCEEEccc---chhHHHHhcCCCEEEe
Confidence 4455555 7999999773 4578999999999964
No 134
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=62.54 E-value=12 Score=33.76 Aligned_cols=42 Identities=19% Similarity=0.211 Sum_probs=23.6
Q ss_pred ccccCCCCcEEEEEc-CCCcccHHH--HHHHHHHHHhCCCeEEEE
Q 012083 10 SESLNKTNVHVLLVS-FPAQGHVAS--LMKLAHRLADCRIKVTFV 51 (471)
Q Consensus 10 ~~~m~~~~~~Il~~~-~~~~GH~~p--~~~La~~L~~rGh~Vt~~ 51 (471)
++.|-++.||||++- .|-...++- .-...+.|.+.||+|+++
T Consensus 15 t~~~~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~ 59 (280)
T 4gi5_A 15 TENLYFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVS 59 (280)
T ss_dssp -------CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCcchhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEE
Confidence 334445779996664 444443433 234677888899999986
No 135
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=62.42 E-value=5.2 Score=34.90 Aligned_cols=37 Identities=14% Similarity=0.146 Sum_probs=29.7
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|...+|||.|+..|..|- .||+.|+++||+|+.+...
T Consensus 2 ~~~~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 2 MQAPRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp -CCCCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCCCCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 444568999999998884 5889999999999987663
No 136
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=61.60 E-value=4.3 Score=38.12 Aligned_cols=45 Identities=18% Similarity=0.149 Sum_probs=32.5
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc-chhhhHH
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF-ICERIKE 62 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~-~~~~~~~ 62 (471)
|.+++|||.|+-.|..|. ++|..|++.||+|++..... ..+.+.+
T Consensus 25 m~~~~mkI~VIGaG~mG~-----alA~~La~~G~~V~l~~r~~~~~~~i~~ 70 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGT-----ALALVLARKGQKVRLWSYESDHVDEMQA 70 (356)
T ss_dssp --CCCSCEEEECCSHHHH-----HHHHHHHTTTCCEEEECSCHHHHHHHHH
T ss_pred ccccCCeEEEECccHHHH-----HHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 555678999998877764 58899999999999987753 3334443
No 137
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=61.51 E-value=45 Score=28.36 Aligned_cols=103 Identities=11% Similarity=0.056 Sum_probs=54.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcch----hhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFIC----ERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE 91 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 91 (471)
+||+++..+..+.+ .+|.+++.+. +|+|..+.+.... +.+.+. |+.+..++..-
T Consensus 1 ~riaVl~SG~Gs~L---~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~--------------gIp~~~~~~~~--- 60 (209)
T 1meo_A 1 ARVAVLISGTGSNL---QALIDSTREPNSSAQIDIVISNKAAVAGLDKAERA--------------GIPTRVINHKL--- 60 (209)
T ss_dssp CEEEEEESSSCTTH---HHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHT--------------TCCEEECCGGG---
T ss_pred CeEEEEEECCchHH---HHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHc--------------CCCEEEECccc---
Confidence 47888776666544 4455565554 7998876554332 223333 77666543210
Q ss_pred CCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCc-chHHHHHHHcCCceEEEeCc
Q 012083 92 DDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTF-GWALQVAAKLELKKASIYTS 157 (471)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~-~~~~~~A~~lgiP~v~~~~~ 157 (471)
..+- ....+.+.+.+++ .+||+||+-.+. .-...+-+...-.++-+.++
T Consensus 61 --~~~r--------~~~~~~~~~~l~~-------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 61 --YKNR--------VEFDSAIDLVLEE-------FSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp --SSSH--------HHHHHHHHHHHHH-------TTCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred --cCch--------hhhhHHHHHHHHh-------cCCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
Confidence 0000 0111223344444 899999977653 33444555566667776654
No 138
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=61.49 E-value=8.7 Score=35.30 Aligned_cols=43 Identities=16% Similarity=0.180 Sum_probs=31.6
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHh
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKES 63 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~ 63 (471)
.+|||+|+..|+.| ..+|..|++.||+|+++..+...+.+.+.
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~~ 60 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEAT 60 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHHH
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHhC
Confidence 35899999888777 45788899999999999444455555555
No 139
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=61.43 E-value=6.1 Score=30.77 Aligned_cols=33 Identities=15% Similarity=0.409 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
.|||+++.. |.+- ..+++.|.+.||+|+++...
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 369998843 5553 35789999999999998764
No 140
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=61.22 E-value=5.7 Score=33.58 Aligned_cols=45 Identities=11% Similarity=0.052 Sum_probs=37.2
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHH
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKE 62 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~ 62 (471)
++||++...|+.+=+. ...+.+.|.++|++|.++.++.....+..
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSCH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 4689888888887775 78999999999999999999877665543
No 141
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=60.81 E-value=8.3 Score=32.15 Aligned_cols=44 Identities=9% Similarity=0.028 Sum_probs=36.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHH
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKE 62 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~ 62 (471)
+||++...|+.+=+ =...+.+.|+++|++|.++.++.....+..
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 46 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFINT 46 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSCG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 57888888887766 578999999999999999999887665543
No 142
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=60.59 E-value=16 Score=33.72 Aligned_cols=32 Identities=13% Similarity=0.117 Sum_probs=28.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
+||.|+..++.| +-++|+.|+++||+|+..=.
T Consensus 5 ~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 5 KHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 799999999888 55799999999999998744
No 143
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=60.33 E-value=32 Score=30.04 Aligned_cols=36 Identities=11% Similarity=0.119 Sum_probs=21.2
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVT 52 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~ 52 (471)
+++|+++..---=-..-+-+....++++|++|++++
T Consensus 3 ~~~vL~v~aHPDDe~l~~Ggtia~~~~~G~~V~vv~ 38 (242)
T 2ixd_A 3 GLHILAFGAHADDVEIGMAGTIAKYTKQGYEVGICD 38 (242)
T ss_dssp CCSEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CccEEEEEeCCChHHHhHHHHHHHHHHCCCeEEEEE
Confidence 456655543222234445556667778999988773
No 144
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=60.33 E-value=13 Score=32.17 Aligned_cols=39 Identities=21% Similarity=0.274 Sum_probs=35.4
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
+++|++..-|+.|=..-++.+|..|+++|++|.++....
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 589999999999999999999999999999998876654
No 145
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=60.15 E-value=58 Score=28.17 Aligned_cols=32 Identities=19% Similarity=0.070 Sum_probs=23.9
Q ss_pred CeeEEEE-CCCc-chHHHHHHHcCCceEEEeCch
Q 012083 127 KITCVIA-DVTF-GWALQVAAKLELKKASIYTSA 158 (471)
Q Consensus 127 ~pD~vV~-D~~~-~~~~~~A~~lgiP~v~~~~~~ 158 (471)
.||+||+ |... ..+..=|.++|||+|.+.-+.
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDTn 190 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDTN 190 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCSS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecCC
Confidence 6998875 4433 267888999999999986543
No 146
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=59.81 E-value=96 Score=28.05 Aligned_cols=103 Identities=15% Similarity=0.145 Sum_probs=57.3
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCC--cchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTE--FICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED 92 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 92 (471)
++||+++..+. || .+.+|..+-... +.+|..+.+. .....+++. |+.+..+|....
T Consensus 105 ~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~--------------gIp~~~~~~~~~--- 164 (302)
T 3o1l_A 105 KKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWH--------------DIPYYHVPVDPK--- 164 (302)
T ss_dssp CCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTT--------------TCCEEECCCCSS---
T ss_pred CcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHc--------------CCCEEEcCCCcC---
Confidence 48998888666 54 456666665543 4677766542 233333333 888877653210
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHHHcCCceEEEeCc
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~~ 157 (471)
. . ....+.+.+.+++ .+||+||.-.+.. -...+.+.+.-.++=+.++
T Consensus 165 ~--r---------~~~~~~~~~~l~~-------~~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 165 D--K---------EPAFAEVSRLVGH-------HQADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp C--C---------HHHHHHHHHHHHH-------TTCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred C--H---------HHHHHHHHHHHHH-------hCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
Confidence 0 0 0012223344444 8999999876543 3444555555566666543
No 147
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=59.75 E-value=11 Score=28.35 Aligned_cols=36 Identities=14% Similarity=0.151 Sum_probs=28.6
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEE
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFV 51 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~ 51 (471)
+.|||+++|..+.|+-.-.-.+-+.+.++|.++.+-
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~ 38 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIE 38 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEE
Confidence 447999999999988866667788888899876653
No 148
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=59.68 E-value=8.6 Score=33.16 Aligned_cols=109 Identities=15% Similarity=0.030 Sum_probs=60.0
Q ss_pred cEEEEEcCCCcccHHH----HHHHHHHHHhC-CCeEEEEeCCcc-hhhhHHhhhcCCCCccCCCCCCeE-EEeCCCCCCC
Q 012083 18 VHVLLVSFPAQGHVAS----LMKLAHRLADC-RIKVTFVTTEFI-CERIKESRQLGSFSEMGDAQQLVR-IVPLPDGLEP 90 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p----~~~La~~L~~r-Gh~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~ 90 (471)
.+|+++.--..|.+.| ++.-|++|++. |-+|+.++.... .+.+.+... .|.. .+.+.+.
T Consensus 4 ~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~-----------~Gad~v~~v~~~--- 69 (217)
T 3ih5_A 4 NNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILP-----------YGVDKLHVFDAE--- 69 (217)
T ss_dssp CCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGG-----------GTCSEEEEEECG---
T ss_pred ccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHh-----------cCCCEEEEecCc---
Confidence 5788888766666555 57778888764 767775544332 222222211 0221 1111110
Q ss_pred CCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc---hHHHHHHHcCCceEEEe
Q 012083 91 EDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG---WALQVAAKLELKKASIY 155 (471)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~---~~~~~A~~lgiP~v~~~ 155 (471)
.-...+... ....+.+++++ .+||+|+...... .+..+|.+|++|++.-.
T Consensus 70 ~~~~~~~~~--------~a~~l~~~i~~-------~~p~~Vl~g~t~~G~~laprlAa~L~~~~~sdv 122 (217)
T 3ih5_A 70 GLYPYTSLP--------HTSILVNLFKE-------EQPQICLMGATVIGRDLGPRVSSALTSGLTADC 122 (217)
T ss_dssp GGSSCCHHH--------HHHHHHHHHHH-------HCCSEEEEECSHHHHHHHHHHHHHTTCCCBCSC
T ss_pred ccccCCHHH--------HHHHHHHHHHh-------cCCCEEEEeCCcchhhHHHHHHHHhCCCccceE
Confidence 000111111 12224455555 6899999987655 35679999999998843
No 149
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=59.44 E-value=30 Score=29.61 Aligned_cols=104 Identities=8% Similarity=0.037 Sum_probs=53.3
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHh-CCCeEEEEeCCcchh---hhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLAD-CRIKVTFVTTEFICE---RIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED 92 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~-rGh~Vt~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 92 (471)
++||+|+..+..+.+. +|.+++.. .+++|..+.+..... ..++. |+.+..++.. ..
T Consensus 12 ~~ri~vl~SG~gsnl~---all~~~~~~~~~eI~~Vis~~~a~~~~~A~~~--------------gIp~~~~~~~--~~- 71 (215)
T 3da8_A 12 PARLVVLASGTGSLLR---SLLDAAVGDYPARVVAVGVDRECRAAEIAAEA--------------SVPVFTVRLA--DH- 71 (215)
T ss_dssp SEEEEEEESSCCHHHH---HHHHHSSTTCSEEEEEEEESSCCHHHHHHHHT--------------TCCEEECCGG--GS-
T ss_pred CcEEEEEEeCChHHHH---HHHHHHhccCCCeEEEEEeCCchHHHHHHHHc--------------CCCEEEeCcc--cc-
Confidence 4799998877655444 44444433 356877665543322 23333 7776655211 00
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCc-chHHHHHHHcCCceEEEeCc
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTF-GWALQVAAKLELKKASIYTS 157 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~-~~~~~~A~~lgiP~v~~~~~ 157 (471)
.+- ....+ ++++.+++ .+||+||+-.+. .-...+-+.+.-.++=++++
T Consensus 72 --~~r--------~~~d~---~~~~~l~~----~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 72 --PSR--------DAWDV---AITAATAA----HEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp --SSH--------HHHHH---HHHHHHHT----TCCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred --cch--------hhhhH---HHHHHHHh----hCCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
Confidence 000 11122 33344444 899999976553 23344445555556666543
No 150
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=58.36 E-value=46 Score=28.67 Aligned_cols=35 Identities=9% Similarity=0.008 Sum_probs=20.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVT 52 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~ 52 (471)
++|+++..---=-..-+-+....+.+.|++|++++
T Consensus 2 ~~vL~v~aHPDDe~l~~ggtia~~~~~G~~v~vv~ 36 (227)
T 1uan_A 2 LDLLVVAPHPDDGELGCGGTLARAKAEGLSTGILD 36 (227)
T ss_dssp EEEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ceEEEEEeCCCcHHHhHHHHHHHHHhCCCcEEEEE
Confidence 67655543222223445556666778999987663
No 151
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=57.43 E-value=18 Score=27.09 Aligned_cols=44 Identities=9% Similarity=0.035 Sum_probs=31.7
Q ss_pred cEEEEEcCC---CcccHHHHHHHHHHHHhC-CC-eEEEEeCCcchhhhH
Q 012083 18 VHVLLVSFP---AQGHVASLMKLAHRLADC-RI-KVTFVTTEFICERIK 61 (471)
Q Consensus 18 ~~Il~~~~~---~~GH~~p~~~La~~L~~r-Gh-~Vt~~~~~~~~~~~~ 61 (471)
+|++|+-.. +.......+.+|..+.+. || +|+++-..+......
T Consensus 2 ~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~~ 50 (117)
T 1jx7_A 2 QKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGL 50 (117)
T ss_dssp CEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGGB
T ss_pred cEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHHh
Confidence 466555444 245567789999999998 99 999888877665544
No 152
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=57.08 E-value=16 Score=31.29 Aligned_cols=45 Identities=7% Similarity=0.007 Sum_probs=38.7
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERI 60 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~ 60 (471)
++.||++.+.++-.|-....-++..|..+|++|..++.....+.+
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENV 135 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHH
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHH
Confidence 357999999999999999999999999999999999876554444
No 153
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=56.38 E-value=7.7 Score=35.28 Aligned_cols=37 Identities=19% Similarity=0.107 Sum_probs=28.2
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|.++.+||.|+-.|..|+ .+|..|+++||+|+++...
T Consensus 11 ~~~~~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp -CCCCCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred ccccCCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 433347899998887776 5788899999999987654
No 154
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=56.22 E-value=9.7 Score=34.70 Aligned_cols=31 Identities=10% Similarity=0.186 Sum_probs=27.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
.||.|+-.+..|. ++|+.|.++||+|++.-.
T Consensus 4 ~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 4 KQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 7999999999885 689999999999998743
No 155
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=55.71 E-value=34 Score=33.57 Aligned_cols=93 Identities=12% Similarity=0.042 Sum_probs=54.0
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc-hhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFI-CERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRK 95 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 95 (471)
..|++++..+. | ...+++.|.+.|-+|..+++... .+..++... ....+.... ...
T Consensus 348 GKrv~i~g~~~--~---~~~la~~L~ElGm~vv~~gt~~~~~~d~~~l~~--------~~~~~~~i~----------~~~ 404 (492)
T 3u7q_A 348 GKRVMLYIGGL--R---PRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMK--------EMGDSTLLY----------DDV 404 (492)
T ss_dssp TCEEEECBSSS--H---HHHTHHHHHTTTCEEEEEEESSCCHHHHHHHHT--------TSCTTCEEE----------ESC
T ss_pred CCEEEEECCCc--h---HHHHHHHHHHCCCEEEEEeCCCCCHHHHHHHHH--------hCCCCcEEE----------cCC
Confidence 46888865443 3 56677888899999998766542 222222100 000011111 001
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEE
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASI 154 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~ 154 (471)
+. ..+.+++++ .+||++|.. .....+|+++|||++.+
T Consensus 405 d~------------~el~~~i~~-------~~pDL~ig~---~~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 405 TG------------YEFEEFVKR-------IKPDLIGSG---IKEKFIFQKMGIPFREM 441 (492)
T ss_dssp BH------------HHHHHHHHH-------HCCSEEEEC---HHHHHHHHHTTCCEEES
T ss_pred CH------------HHHHHHHHh-------cCCcEEEeC---cchhHHHHHcCCCEEec
Confidence 11 123444555 799999997 34678999999999974
No 156
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=55.58 E-value=39 Score=32.71 Aligned_cols=26 Identities=12% Similarity=0.144 Sum_probs=22.4
Q ss_pred CCeeEEEECCCcchHHHHHHHcCCceEEE
Q 012083 126 EKITCVIADVTFGWALQVAAKLELKKASI 154 (471)
Q Consensus 126 ~~pD~vV~D~~~~~~~~~A~~lgiP~v~~ 154 (471)
.+||++|.+.. ...+|+++|||++.+
T Consensus 384 ~~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 384 EGVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp SCCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred cCCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 89999998854 577889999999986
No 157
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=55.26 E-value=14 Score=33.79 Aligned_cols=41 Identities=20% Similarity=0.110 Sum_probs=31.4
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc-hhhhHHh
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFI-CERIKES 63 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~-~~~~~~~ 63 (471)
+|||+|+..|+.|- .+|..|+ .||+|+++..... .+.+.+.
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l~~~ 43 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAIQSE 43 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHHHhC
Confidence 37999998887775 5678888 9999999987653 4555555
No 158
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=54.64 E-value=47 Score=32.61 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=36.6
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhh
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICER 59 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~ 59 (471)
+..|+|+..++.|=..-+..||..|+++|++|.++..+.++..
T Consensus 101 ~~vI~ivG~~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~r~a 143 (504)
T 2j37_W 101 QNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAG 143 (504)
T ss_dssp -EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEECCSSSH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEeccccchh
Confidence 4578889899999999999999999999999999988665443
No 159
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=54.63 E-value=18 Score=31.42 Aligned_cols=23 Identities=17% Similarity=0.117 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCc
Q 012083 33 SLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 33 p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
.-.++|++|.++|++|++++.+.
T Consensus 31 mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 31 LGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHCCCEEEEEeCCc
Confidence 34678999999999999998864
No 160
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=54.56 E-value=8.2 Score=29.83 Aligned_cols=30 Identities=17% Similarity=0.086 Sum_probs=22.0
Q ss_pred CCeeEEEECCCcc--hHHHHHH---HcCCceEEEe
Q 012083 126 EKITCVIADVTFG--WALQVAA---KLELKKASIY 155 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~---~lgiP~v~~~ 155 (471)
.+||+|+.|...+ -|..+++ ..++|+|.++
T Consensus 52 ~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 52 GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 8999999999877 3444443 4578977754
No 161
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=54.48 E-value=26 Score=27.81 Aligned_cols=46 Identities=15% Similarity=0.200 Sum_probs=34.8
Q ss_pred cEEEEEc-CCCc-ccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHh
Q 012083 18 VHVLLVS-FPAQ-GHVASLMKLAHRLADCRIKVTFVTTEFICERIKES 63 (471)
Q Consensus 18 ~~Il~~~-~~~~-GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~ 63 (471)
||++++- .|.. -.+--.+=++..|.++||+|++++++.....++-+
T Consensus 7 m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 7 GKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp CEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred eeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc
Confidence 5765553 4544 44444678899999999999999999988887755
No 162
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=54.23 E-value=1e+02 Score=28.41 Aligned_cols=100 Identities=10% Similarity=0.085 Sum_probs=59.3
Q ss_pred cEEEEEcCCCcc--c--HHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCC
Q 012083 18 VHVLLVSFPAQG--H--VASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDD 93 (471)
Q Consensus 18 ~~Il~~~~~~~G--H--~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 93 (471)
.-|+|.|..+.. . ..-+..|++.|.++|++|.+.+.+...+..++..... +-....+. .
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~----------~~~~~~l~-------g 248 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQM----------ETKPIVAT-------G 248 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTC----------SSCCEECT-------T
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhc----------ccccEEee-------C
Confidence 457777765433 2 3468899999998999999877766555544331100 00001110 0
Q ss_pred cccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCc
Q 012083 94 RKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTS 157 (471)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~ 157 (471)
..+ +.++..-+ .+.|++|+.- .+..++|..+|+|+|.++..
T Consensus 249 ~~s---------------l~e~~ali------~~a~~~i~~D--sG~~HlAaa~g~P~v~lfg~ 289 (349)
T 3tov_A 249 KFQ---------------LGPLAAAM------NRCNLLITND--SGPMHVGISQGVPIVALYGP 289 (349)
T ss_dssp CCC---------------HHHHHHHH------HTCSEEEEES--SHHHHHHHTTTCCEEEECSS
T ss_pred CCC---------------HHHHHHHH------HhCCEEEECC--CCHHHHHHhcCCCEEEEECC
Confidence 111 22222322 3678888743 46788899999999998653
No 163
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=53.92 E-value=44 Score=32.55 Aligned_cols=43 Identities=19% Similarity=0.291 Sum_probs=30.6
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHh
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKES 63 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~ 63 (471)
++||-+|++. ++=.-++.+|+.|.+.|+++. ++......+++.
T Consensus 8 ~~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~ 50 (523)
T 3zzm_A 8 RPIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT 50 (523)
T ss_dssp CCCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT
T ss_pred ccccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc
Confidence 3456566665 344558899999999999875 566677777776
No 164
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=53.91 E-value=42 Score=28.87 Aligned_cols=37 Identities=22% Similarity=0.363 Sum_probs=30.4
Q ss_pred EEEEEcCC-CcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 19 HVLLVSFP-AQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 19 ~Il~~~~~-~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
.|.+++.+ +.|=..-++.++..+..+|..|.++.+..
T Consensus 13 ~i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~~~~ 50 (223)
T 2b8t_A 13 WIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKI 50 (223)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEEecc
Confidence 45555555 99999999999999999999999886544
No 165
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=53.68 E-value=20 Score=26.88 Aligned_cols=34 Identities=9% Similarity=0.061 Sum_probs=24.3
Q ss_pred CCeeEEEECCCcc--hHHHHHHHc-------CCceEEEeCchH
Q 012083 126 EKITCVIADVTFG--WALQVAAKL-------ELKKASIYTSAP 159 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~l-------giP~v~~~~~~~ 159 (471)
.+||+||.|...+ .+..+++.+ ++|.+.++....
T Consensus 45 ~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~ 87 (122)
T 3gl9_A 45 FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGG 87 (122)
T ss_dssp BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCS
T ss_pred cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCc
Confidence 7899999998765 455555543 589888876543
No 166
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=53.31 E-value=8.5 Score=35.22 Aligned_cols=39 Identities=15% Similarity=-0.006 Sum_probs=30.0
Q ss_pred cE-EEEEcCCCcccH--------------HHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 18 VH-VLLVSFPAQGHV--------------ASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 18 ~~-Il~~~~~~~GH~--------------~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
.| |++...|++=.+ ..-.++|+++.++|++|++++.+..
T Consensus 37 k~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 37 RRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp CCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred CeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 45 777777775555 2567899999999999999987643
No 167
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=53.24 E-value=34 Score=32.86 Aligned_cols=24 Identities=17% Similarity=0.401 Sum_probs=19.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRI 46 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh 46 (471)
||||++..+++.| +||+.|++.+.
T Consensus 4 mkvlviG~ggre~-----ala~~l~~s~~ 27 (431)
T 3mjf_A 4 MNILIIGNGGREH-----ALGWKAAQSPL 27 (431)
T ss_dssp EEEEEEECSHHHH-----HHHHHHTTCTT
T ss_pred cEEEEECCCHHHH-----HHHHHHHhCCC
Confidence 8999998886544 68999998875
No 168
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=53.20 E-value=14 Score=30.52 Aligned_cols=45 Identities=16% Similarity=0.094 Sum_probs=29.5
Q ss_pred ccccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 10 SESLNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 10 ~~~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
|..|++.+.+|+++...+.-... +..-.+.|.+.|++|++++...
T Consensus 1 s~~m~~t~~~v~il~~~gFe~~E-~~~p~~~l~~ag~~V~~~s~~~ 45 (177)
T 4hcj_A 1 SNAMGKTNNILYVMSGQNFQDEE-YFESKKIFESAGYKTKVSSTFI 45 (177)
T ss_dssp ----CCCCEEEEECCSEEECHHH-HHHHHHHHHHTTCEEEEEESSS
T ss_pred CCccccCCCEEEEECCCCccHHH-HHHHHHHHHHCCCEEEEEECCC
Confidence 34577766666666655554444 4566788899999999998754
No 169
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=53.00 E-value=8.3 Score=35.09 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
++|||.|+-.|..|. .+|+.|++.||+|++....
T Consensus 6 ~~~~I~iIG~G~mG~-----~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGM-----GAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECCCHHHH-----HHHHHHHHCCCeEEEEECC
Confidence 458999997776664 6789999999999988543
No 170
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=52.96 E-value=55 Score=26.99 Aligned_cols=142 Identities=12% Similarity=0.113 Sum_probs=73.5
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceee
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACY 366 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ 366 (471)
|.|-|-+|| ..+....++....|+..+..+-+.+.+- ...|+.+.+.. -+.. ...++++
T Consensus 14 ~~V~IimGS--~SD~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~~~----------~~a~---~~g~~Vi 72 (183)
T 1o4v_A 14 PRVGIIMGS--DSDLPVMKQAAEILEEFGIDYEITIVSA------HRTPDRMFEYA----------KNAE---ERGIEVI 72 (183)
T ss_dssp CEEEEEESC--GGGHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHHHHH----------HHTT---TTTCCEE
T ss_pred CeEEEEecc--HHHHHHHHHHHHHHHHcCCCeEEEEEcc------cCCHHHHHHHH----------HHHH---hCCCcEE
Confidence 477777777 4456667778888888888766555433 34555533221 1100 0112235
Q ss_pred eeccCcc----hhhHhhhcCCceeecccccc--hhhhHH-HHHhhh--ccee-eecCCCCCCcCHhHHHHHHHHHhCcHH
Q 012083 367 LTHCGWN----STMEGISMGVPFLCWPWGHD--HLYIKS-CICDDW--KIGL-WLEPDDNGIIGRHEIKRKVDELLSNDV 436 (471)
Q Consensus 367 ItHgG~~----s~~eal~~GvP~l~~P~~~D--Q~~na~-~v~~~~--G~G~-~~~~~~~~~~~~~~l~~~i~~ll~~~~ 436 (471)
|.=+|.- ++..++ .-+|+|.+|.... ....+. -+.+ . |+.+ ++.. ++.++..-++..|- -+.|++
T Consensus 73 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~I--d~~~nAa~lAaqIl-a~~d~~ 147 (183)
T 1o4v_A 73 IAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAI--NNAKNAGILAASIL-GIKYPE 147 (183)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCT--TCHHHHHHHHHHHH-HTTCHH
T ss_pred EEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEec--CCchHHHHHHHHHH-hcCCHH
Confidence 5554432 333333 5678888887432 111111 1122 2 4332 1222 13444444454443 456778
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 012083 437 VRKNALKLKELAQKSVTK 454 (471)
Q Consensus 437 ~~~~a~~l~~~~~~~~~~ 454 (471)
++++.+.+++..++.+.+
T Consensus 148 l~~kL~~~r~~~~~~v~~ 165 (183)
T 1o4v_A 148 IARKVKEYKERMKREVLE 165 (183)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888888887777766433
No 171
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=52.76 E-value=54 Score=28.09 Aligned_cols=44 Identities=18% Similarity=0.166 Sum_probs=34.1
Q ss_pred cEEEEEcCCCcccHHHHHHHHHH-HHhCCCeEEEEeCCcchhhhH
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHR-LADCRIKVTFVTTEFICERIK 61 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~-L~~rGh~Vt~~~~~~~~~~~~ 61 (471)
.=+++...|+.|=..-++.+|.. +.+.|..|.+++.....+.+.
T Consensus 31 ~l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~~ 75 (251)
T 2zts_A 31 TTVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLR 75 (251)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHHH
Confidence 45788888999999999998766 455688999998887665544
No 172
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=52.75 E-value=97 Score=25.55 Aligned_cols=105 Identities=22% Similarity=0.171 Sum_probs=67.8
Q ss_pred cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhH
Q 012083 298 KLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTME 377 (471)
Q Consensus 298 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~e 377 (471)
-..++.+..+++..+..+.+++++..+. ...||.-....++--|.-++ .+.+ +-+|..+.+.
T Consensus 51 HR~p~~l~~~~~~a~~~g~~ViIa~AG~-----aa~LpgvvA~~t~~PVIgVP----------~~~~---~l~G~dsLlS 112 (183)
T 1o4v_A 51 HRTPDRMFEYAKNAEERGIEVIIAGAGG-----AAHLPGMVASITHLPVIGVP----------VKTS---TLNGLDSLFS 112 (183)
T ss_dssp TTCHHHHHHHHHHTTTTTCCEEEEEEES-----SCCHHHHHHHHCSSCEEEEE----------ECCT---TTTTHHHHHH
T ss_pred cCCHHHHHHHHHHHHhCCCcEEEEecCc-----ccccHHHHHhccCCCEEEee----------CCCC---CCCcHHHHHH
Confidence 4567888888888877788888887764 35677654444444444443 1111 3478888888
Q ss_pred hhhc--CCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhC
Q 012083 378 GISM--GVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLS 433 (471)
Q Consensus 378 al~~--GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 433 (471)
.+.. |+|+-++ ..|-..||..++-. + +. ++..+|.+.+++--.
T Consensus 113 ivqmP~GvpVatV--~Id~~~nAa~lAaq--I---la------~~d~~l~~kL~~~r~ 157 (183)
T 1o4v_A 113 IVQMPGGVPVATV--AINNAKNAGILAAS--I---LG------IKYPEIARKVKEYKE 157 (183)
T ss_dssp HHTCCTTCCCEEC--CTTCHHHHHHHHHH--H---HH------TTCHHHHHHHHHHHH
T ss_pred HhcCCCCCeeEEE--ecCCchHHHHHHHH--H---Hh------cCCHHHHHHHHHHHH
Confidence 8998 9995444 45688898877663 1 22 244577777765543
No 173
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=52.00 E-value=1.2e+02 Score=26.44 Aligned_cols=41 Identities=0% Similarity=-0.066 Sum_probs=25.8
Q ss_pred cCCCCcEEEEEcCCCcccHH--HHHHHHHHHHhCCCeEEEEeC
Q 012083 13 LNKTNVHVLLVSFPAQGHVA--SLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~--p~~~La~~L~~rGh~Vt~~~~ 53 (471)
|.++..+|.++.......+. -...+-+++.++|+++.+...
T Consensus 1 ~s~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 43 (291)
T 3l49_A 1 MSLEGKTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDA 43 (291)
T ss_dssp -CCTTCEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcC
Confidence 44556788777654443332 244677777888998888754
No 174
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=51.87 E-value=16 Score=28.55 Aligned_cols=35 Identities=14% Similarity=0.174 Sum_probs=26.3
Q ss_pred CCeeEEEECCCcc--hHHHHHHHc-------CCceEEEeCchHH
Q 012083 126 EKITCVIADVTFG--WALQVAAKL-------ELKKASIYTSAPG 160 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~l-------giP~v~~~~~~~~ 160 (471)
.+||+||.|...+ -|..+++.+ .+|.|.++.....
T Consensus 56 ~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~~ 99 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKR 99 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCCH
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCCH
Confidence 6899999999887 566666644 5898888765443
No 175
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=51.14 E-value=8.9 Score=34.93 Aligned_cols=48 Identities=27% Similarity=0.353 Sum_probs=26.5
Q ss_pred CccccccccccccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 1 MEFRYFASESESLNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 1 ~~~~~~~~~~~~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|||.+-.+.+.+|.+ ..+|+++-.+..| +..|..|+++|++|+++-..
T Consensus 1 ~~~~l~~~~~~~m~~-~~dvvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 48 (319)
T 3cty_A 1 MEFNLHAVSSEEKER-DFDVVIVGAGAAG-----FSAAVYAARSGFSVAILDKA 48 (319)
T ss_dssp -------------CC-EEEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred CcccccccccccccC-CCcEEEECcCHHH-----HHHHHHHHhCCCcEEEEeCC
Confidence 678777777777743 3678888877555 56788889999999999763
No 176
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=51.04 E-value=26 Score=27.11 Aligned_cols=43 Identities=7% Similarity=-0.134 Sum_probs=29.8
Q ss_pred EEEEEc-CCCc--ccHHHHHHHHHHHHhCCCeE-EEEeCCcchhhhH
Q 012083 19 HVLLVS-FPAQ--GHVASLMKLAHRLADCRIKV-TFVTTEFICERIK 61 (471)
Q Consensus 19 ~Il~~~-~~~~--GH~~p~~~La~~L~~rGh~V-t~~~~~~~~~~~~ 61 (471)
|++|+- .+.+ ......+.+|.++.+.||+| +++-..+-.....
T Consensus 2 k~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV~~~~ 48 (130)
T 2hy5_A 2 KFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGVNNST 48 (130)
T ss_dssp EEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGGB
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHHHHHh
Confidence 554443 3333 35667889999999999999 8887766654443
No 177
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=50.98 E-value=21 Score=34.49 Aligned_cols=42 Identities=19% Similarity=0.230 Sum_probs=34.5
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHh-CCCeEEEEeCCcchhhh
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLAD-CRIKVTFVTTEFICERI 60 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~-rGh~Vt~~~~~~~~~~~ 60 (471)
=+++...|+.|=..-++.+|...+. .|..|.+++.....+.+
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~l 244 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQL 244 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHHH
Confidence 4677888999999999999999886 58999999887655433
No 178
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=50.94 E-value=13 Score=32.71 Aligned_cols=43 Identities=19% Similarity=0.190 Sum_probs=31.4
Q ss_pred CCCCcEEEEEc--CCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 14 NKTNVHVLLVS--FPAQGHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 14 ~~~~~~Il~~~--~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
..++||++.+. -|+-|=..-...||..|+++|++|.++=....
T Consensus 2 ~~~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 46 (257)
T 1wcv_1 2 LRAKVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQ 46 (257)
T ss_dssp ---CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCCCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 33456665554 45668889999999999999999999865543
No 179
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=50.89 E-value=23 Score=32.53 Aligned_cols=103 Identities=17% Similarity=0.134 Sum_probs=57.0
Q ss_pred cEEEEEcCCCcc---c--HHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC
Q 012083 18 VHVLLVSFPAQG---H--VASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED 92 (471)
Q Consensus 18 ~~Il~~~~~~~G---H--~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 92 (471)
..|++.|....+ . ..-+..+++.|.++|++|.+++.+.-.+..++... .. ..........+..
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~-~~-----~~~~~~~~~~l~g------ 248 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILA-AL-----NTEQQAWCRNLAG------ 248 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHT-TS-----CHHHHTTEEECTT------
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHH-hh-----hhccccceEeccC------
Confidence 457777755222 2 33688999999989999988776655443332210 00 0000000111100
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeC
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYT 156 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~ 156 (471)
..+ +.++..-+ .+.|++|+.. .+...+|..+|+|+|.++.
T Consensus 249 -~~s---------------l~e~~ali------~~a~l~I~~D--sg~~HlAaa~g~P~v~lfg 288 (348)
T 1psw_A 249 -ETQ---------------LDQAVILI------AACKAIVTND--SGLMHVAAALNRPLVALYG 288 (348)
T ss_dssp -TSC---------------HHHHHHHH------HTSSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred -cCC---------------HHHHHHHH------HhCCEEEecC--CHHHHHHHHcCCCEEEEEC
Confidence 001 22333322 3678888753 4677889999999999864
No 180
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=50.85 E-value=53 Score=28.71 Aligned_cols=37 Identities=11% Similarity=0.086 Sum_probs=27.2
Q ss_pred cEEEEEcCCCcccHH-HHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVA-SLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~-p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|||+++-..+.-++. .+...++.++.-|.+|.+++.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 589888777766664 5666888877778888887754
No 181
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=50.50 E-value=19 Score=32.60 Aligned_cols=41 Identities=20% Similarity=0.204 Sum_probs=29.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc-chhhhHHh
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF-ICERIKES 63 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~-~~~~~~~~ 63 (471)
|||+|+..|..|. .+|..|.++||+|+++.... ..+.+.+.
T Consensus 4 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r~~~~~~~~~~~ 45 (316)
T 2ew2_A 4 MKIAIAGAGAMGS-----RLGIMLHQGGNDVTLIDQWPAHIEAIRKN 45 (316)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred CeEEEECcCHHHH-----HHHHHHHhCCCcEEEEECCHHHHHHHHhC
Confidence 7999998766663 57889999999999987633 33344433
No 182
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=50.48 E-value=22 Score=31.50 Aligned_cols=47 Identities=13% Similarity=0.118 Sum_probs=39.2
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHH--------HHhC-CCeEEEEeCCcchhhhHH
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHR--------LADC-RIKVTFVTTEFICERIKE 62 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~--------L~~r-Gh~Vt~~~~~~~~~~~~~ 62 (471)
++.||++.+.++-.|-....-++.. |..+ |++|..++.....+.+.+
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~ 174 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIK 174 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHH
Confidence 4679999999999999999989877 9999 999999888665555443
No 183
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=50.18 E-value=1.1e+02 Score=25.28 Aligned_cols=146 Identities=14% Similarity=0.096 Sum_probs=80.2
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceee
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACY 366 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ 366 (471)
+.|-|-+|| ..+-...++....|+..+..+-+.+-+- ...|+.+.+.. -+ .....++++
T Consensus 22 ~~V~IimGS--~SD~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~~~----------~~---a~~~g~~Vi 80 (182)
T 1u11_A 22 PVVGIIMGS--QSDWETMRHADALLTELEIPHETLIVSA------HRTPDRLADYA----------RT---AAERGLNVI 80 (182)
T ss_dssp CSEEEEESS--GGGHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHHHH----------HH---TTTTTCCEE
T ss_pred CEEEEEECc--HHHHHHHHHHHHHHHHcCCCeEEEEEcc------cCCHHHHHHHH----------HH---HHhCCCcEE
Confidence 356666676 4456667788889999998876655433 23444432111 10 001113347
Q ss_pred eeccCcc----hhhHhhhcCCceeecccccc--hhhhH-HHHHh--hhcceee-ecCCCCCCcCHhHHHHHHHHHhCcHH
Q 012083 367 LTHCGWN----STMEGISMGVPFLCWPWGHD--HLYIK-SCICD--DWKIGLW-LEPDDNGIIGRHEIKRKVDELLSNDV 436 (471)
Q Consensus 367 ItHgG~~----s~~eal~~GvP~l~~P~~~D--Q~~na-~~v~~--~~G~G~~-~~~~~~~~~~~~~l~~~i~~ll~~~~ 436 (471)
|.=.|.- ++..++ .-+|+|.+|.... ....+ .-+.+ . |+.+. +..++.+.++..-+...|- -+.|++
T Consensus 81 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~~ 157 (182)
T 1u11_A 81 IAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALYNPA 157 (182)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGGCHH
T ss_pred EEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccCCHH
Confidence 7766633 444443 4789999998542 11111 11222 2 66632 2221002234444444443 567899
Q ss_pred HHHHHHHHHHHHHHHhhcCC
Q 012083 437 VRKNALKLKELAQKSVTKEG 456 (471)
Q Consensus 437 ~~~~a~~l~~~~~~~~~~gg 456 (471)
++++.+.+++..++.+.+..
T Consensus 158 l~~kL~~~r~~~~~~v~~~~ 177 (182)
T 1u11_A 158 LAARLETWRALQTASVPNSP 177 (182)
T ss_dssp HHHHHHHHHHHHHHHSCSSC
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999999988765443
No 184
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=50.07 E-value=23 Score=32.25 Aligned_cols=39 Identities=13% Similarity=-0.056 Sum_probs=30.3
Q ss_pred CcEEEEEcCCCccc----HHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 17 NVHVLLVSFPAQGH----VASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 17 ~~~Il~~~~~~~GH----~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
++||+++..+..+- +.-...++++|.+.||+|..+....
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 57999988765442 3457889999999999999988543
No 185
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=49.65 E-value=18 Score=33.17 Aligned_cols=33 Identities=12% Similarity=0.254 Sum_probs=27.5
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
.|||.|+-.|..| ..+|+.|++.||+|+++...
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 4899999888777 56888999999999987543
No 186
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=49.47 E-value=13 Score=32.95 Aligned_cols=52 Identities=15% Similarity=0.171 Sum_probs=37.4
Q ss_pred ceeeeeccCcchhhHhhhc---CCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCc
Q 012083 363 VACYLTHCGWNSTMEGISM---GVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSN 434 (471)
Q Consensus 363 ~~~~ItHgG~~s~~eal~~---GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 434 (471)
++++|+=||-||+.++++. ++|++.++.. . +|.-. .+.++++.++++.++++
T Consensus 42 ~D~vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~-~Gfl~--------~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 42 ADLIVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------R-LGFLT--------SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CSEEEEEECHHHHHHHHTTBCTTCEEEEEESS-----------S-CCSSC--------CBCGGGHHHHHHHHHTT
T ss_pred CCEEEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------C-CCccC--------cCCHHHHHHHHHHHHcC
Confidence 4459999999999999877 8898888521 1 22221 24567888888888765
No 187
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=49.05 E-value=29 Score=35.47 Aligned_cols=32 Identities=3% Similarity=-0.267 Sum_probs=21.8
Q ss_pred CCeeEEEECCCc-chHHHHHHHcCCceEEEeCc
Q 012083 126 EKITCVIADVTF-GWALQVAAKLELKKASIYTS 157 (471)
Q Consensus 126 ~~pD~vV~D~~~-~~~~~~A~~lgiP~v~~~~~ 157 (471)
.+||+||+-.+. .-...+-+.....++-++++
T Consensus 74 ~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~s 106 (660)
T 1z7e_A 74 LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (660)
T ss_dssp HCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred cCCCEEEEcCcccccCHHHHhcCCCCeEEecCC
Confidence 799999986553 34444555566667888776
No 188
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=48.92 E-value=1.4e+02 Score=26.23 Aligned_cols=45 Identities=9% Similarity=0.115 Sum_probs=29.4
Q ss_pred cCCCCcEEEEEcCCC--cccHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 012083 13 LNKTNVHVLLVSFPA--QGHVASLMKLAHRLADCRIKVTFVTTEFICERI 60 (471)
Q Consensus 13 m~~~~~~Il~~~~~~--~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~ 60 (471)
|..-+-|+++++.++ .| + -.++|+.|+++|++|.++......+.+
T Consensus 21 M~~l~~k~vlVTGasg~~G-I--G~~ia~~l~~~G~~V~~~~r~~~~~~~ 67 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKS-I--AYGIAKAMHREGAELAFTYVGQFKDRV 67 (280)
T ss_dssp -CTTTTCEEEECCCCSTTC-H--HHHHHHHHHHTTCEEEEEECTTCHHHH
T ss_pred ccccCCCEEEEECCCCCCC-H--HHHHHHHHHHcCCEEEEeeCchHHHHH
Confidence 654445677777644 22 2 357899999999999988776533333
No 189
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=48.92 E-value=19 Score=29.96 Aligned_cols=40 Identities=8% Similarity=0.032 Sum_probs=19.0
Q ss_pred cccccCCCCcEEEEEcCCCcccHHHHHHHHHHHH-hCCCeE
Q 012083 9 ESESLNKTNVHVLLVSFPAQGHVASLMKLAHRLA-DCRIKV 48 (471)
Q Consensus 9 ~~~~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~-~rGh~V 48 (471)
.+..|+..+|||||++.+=..---..-+|.+.+. ..|.++
T Consensus 26 ~g~~m~~~~mkVLFVC~GNiCRSpmAE~l~r~~~~~~g~~~ 66 (180)
T 4egs_A 26 GGQQMGRGSMRVLFVCTGNTCRSPMAEGIFNAKSKALGKDW 66 (180)
T ss_dssp --------CCEEEEEESSSSSHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCcCCCCCeEEEEEeCCCcccCHHHHHHHHHHHHhcCCce
Confidence 4556888899999999874443333444555543 345433
No 190
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=48.34 E-value=29 Score=33.39 Aligned_cols=43 Identities=21% Similarity=0.213 Sum_probs=35.7
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhh
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICER 59 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~ 59 (471)
+.-|+++..++.|=..-+..||..|+.+|++|.+++.+.++..
T Consensus 97 ~~vI~lvG~~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~r~~ 139 (433)
T 3kl4_A 97 PFIIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYRPA 139 (433)
T ss_dssp SEEEEECCCTTSCHHHHHHHHHHHHHHTTCCEEEEEECCSCHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEecCccchh
Confidence 3456777777889999999999999999999999987766543
No 191
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=48.06 E-value=14 Score=33.10 Aligned_cols=52 Identities=12% Similarity=0.074 Sum_probs=36.7
Q ss_pred ceeeeeccCcchhhHhhhc------CCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCc
Q 012083 363 VACYLTHCGWNSTMEGISM------GVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSN 434 (471)
Q Consensus 363 ~~~~ItHgG~~s~~eal~~------GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 434 (471)
++++|+=||-||+.++... ++|++.+|.. . +|. + ..+.++++.++++.++++
T Consensus 36 ~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~-lgf---l-----~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------H-LGF---Y-----ADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------S-CCS---S-----CCBCGGGHHHHHHHHHTT
T ss_pred CCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------C-CCc---C-----CcCCHHHHHHHHHHHHcC
Confidence 3459999999999999765 8899988741 1 231 1 223567788888887765
No 192
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=47.92 E-value=16 Score=34.17 Aligned_cols=40 Identities=18% Similarity=0.321 Sum_probs=22.7
Q ss_pred cccccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 9 ESESLNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 9 ~~~~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
..++|+.++|||+++. + |.+-. .+++.|+ +.|+|+++...
T Consensus 8 ~~~~~~g~~mkilvlG--a-G~vG~--~~~~~L~-~~~~v~~~~~~ 47 (365)
T 3abi_A 8 HHHHIEGRHMKVLILG--A-GNIGR--AIAWDLK-DEFDVYIGDVN 47 (365)
T ss_dssp --------CCEEEEEC--C-SHHHH--HHHHHHT-TTSEEEEEESC
T ss_pred ccccccCCccEEEEEC--C-CHHHH--HHHHHHh-cCCCeEEEEcC
Confidence 4567888999999994 4 66543 4567776 46999987653
No 193
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=47.88 E-value=17 Score=33.24 Aligned_cols=34 Identities=9% Similarity=0.070 Sum_probs=28.2
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
+|||+++..+ ....+++++.++||+|.++.....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~ 35 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSKV 35 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCC
Confidence 4799999876 467899999999999999877644
No 194
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=47.73 E-value=35 Score=25.36 Aligned_cols=36 Identities=14% Similarity=0.141 Sum_probs=29.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
+||+++|..+.|--.-.-.+=+.+.++|.++.+-..
T Consensus 4 kkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~ 39 (106)
T 1e2b_A 4 KHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAF 39 (106)
T ss_dssp EEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 789999988887666667888889999988776543
No 195
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=47.73 E-value=36 Score=31.73 Aligned_cols=36 Identities=17% Similarity=-0.007 Sum_probs=23.3
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcC
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRP 324 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 324 (471)
++++.+.||-+ .-.-...++++|.+.+++++|....
T Consensus 4 ~i~i~~GGTgG--Hi~palala~~L~~~g~~V~~vg~~ 39 (365)
T 3s2u_A 4 NVLIMAGGTGG--HVFPALACAREFQARGYAVHWLGTP 39 (365)
T ss_dssp EEEEECCSSHH--HHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred cEEEEcCCCHH--HHHHHHHHHHHHHhCCCEEEEEECC
Confidence 46666666632 1111345788898899999988754
No 196
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=47.66 E-value=1.3e+02 Score=27.09 Aligned_cols=98 Identities=17% Similarity=0.207 Sum_probs=55.9
Q ss_pred cEEEEEcCCCcc--c--HHHHHHHHHHHHhCCCeEEEE-eCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC
Q 012083 18 VHVLLVSFPAQG--H--VASLMKLAHRLADCRIKVTFV-TTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED 92 (471)
Q Consensus 18 ~~Il~~~~~~~G--H--~~p~~~La~~L~~rGh~Vt~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 92 (471)
..|++.|..+.. . ..-+..|++.|.++|++|.+. +++.-.+..++.. ...+++.+ .
T Consensus 179 ~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~---------~~~~~~~l--~-------- 239 (326)
T 2gt1_A 179 EYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLA---------EGFAYVEV--L-------- 239 (326)
T ss_dssp SEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHH---------TTCTTEEE--C--------
T ss_pred CEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHH---------hhCCcccc--c--------
Confidence 467777765432 1 336889999999889998876 4333333333221 00112211 0
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCc
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTS 157 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~ 157 (471)
...+ +.++..-+ .+.|++|+.. .+..++|..+|+|+|.++..
T Consensus 240 g~~s---------------l~el~ali------~~a~l~I~~D--SG~~HlAaa~g~P~v~lfg~ 281 (326)
T 2gt1_A 240 PKMS---------------LEGVARVL------AGAKFVVSVD--TGLSHLTAALDRPNITVYGP 281 (326)
T ss_dssp CCCC---------------HHHHHHHH------HTCSEEEEES--SHHHHHHHHTTCCEEEEESS
T ss_pred CCCC---------------HHHHHHHH------HhCCEEEecC--CcHHHHHHHcCCCEEEEECC
Confidence 0111 22222222 3678888654 35778899999999998753
No 197
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=47.42 E-value=22 Score=28.28 Aligned_cols=34 Identities=12% Similarity=0.159 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
.++|+++.. |.+- ..+++.|.++|++|+++....
T Consensus 19 ~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECCH
Confidence 579999864 4333 457889999999999987643
No 198
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=46.84 E-value=99 Score=26.75 Aligned_cols=35 Identities=11% Similarity=-0.125 Sum_probs=25.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
.|+++++.++.| --.++|+.|+++|++|.++.-..
T Consensus 7 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~~ 41 (252)
T 3h7a_A 7 NATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRRNG 41 (252)
T ss_dssp SCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 456666655543 24688999999999999886643
No 199
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=46.23 E-value=21 Score=31.50 Aligned_cols=43 Identities=16% Similarity=0.228 Sum_probs=30.9
Q ss_pred cCCCCcEEEEEcC--CCcccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 13 LNKTNVHVLLVSF--PAQGHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 13 m~~~~~~Il~~~~--~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
|..+++|++.+.. |+-|=..-...||..|+ +|++|.++-....
T Consensus 22 ~~~~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~ 66 (267)
T 3k9g_A 22 MDNKKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDTQ 66 (267)
T ss_dssp ----CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECTT
T ss_pred CCCCCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCCC
Confidence 5555677766654 46688899999999999 9999999865543
No 200
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=46.21 E-value=14 Score=34.07 Aligned_cols=33 Identities=12% Similarity=0.169 Sum_probs=28.1
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
+|||.|+..|..| ..+|..|.+.||+|++....
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 6899999888777 47889999999999998764
No 201
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=46.17 E-value=13 Score=35.02 Aligned_cols=30 Identities=37% Similarity=0.404 Sum_probs=25.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVT 52 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~ 52 (471)
|||+|+-.+-.| +.+|..|+++||+|+++-
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 599999877655 778889999999999984
No 202
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=46.17 E-value=19 Score=33.93 Aligned_cols=38 Identities=16% Similarity=0.144 Sum_probs=28.9
Q ss_pred CCcEEEEEcCCCcc-c---HHHHHHHHHHH-HhCCCeEEEEeC
Q 012083 16 TNVHVLLVSFPAQG-H---VASLMKLAHRL-ADCRIKVTFVTT 53 (471)
Q Consensus 16 ~~~~Il~~~~~~~G-H---~~p~~~La~~L-~~rGh~Vt~~~~ 53 (471)
+||||+++..+-.+ | +.....++++| .++||+|+.+..
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 46899999866555 3 23467889999 999999998854
No 203
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=46.05 E-value=15 Score=34.16 Aligned_cols=34 Identities=18% Similarity=0.097 Sum_probs=26.0
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
++|||+|+..|..|. .+|..|++.||+|+++...
T Consensus 3 ~~mki~iiG~G~~G~-----~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGH-----AFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CcCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEeCC
Confidence 348999998766553 4688899999999988653
No 204
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=45.78 E-value=29 Score=27.30 Aligned_cols=39 Identities=26% Similarity=0.263 Sum_probs=29.0
Q ss_pred cEEEEEcCCCcccHHHHH-HHHHHHHhCCCeEEEEeCCcc
Q 012083 18 VHVLLVSFPAQGHVASLM-KLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~-~La~~L~~rGh~Vt~~~~~~~ 56 (471)
|||+++-....|+..-+. .|++.|.++|++|.++.....
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~ 41 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAADA 41 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTTB
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhhC
Confidence 688777666788876544 467888889999998866543
No 205
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=45.59 E-value=18 Score=32.77 Aligned_cols=32 Identities=9% Similarity=0.160 Sum_probs=26.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|||.|+-.+..|. .+|+.|.+.||+|+++...
T Consensus 4 ~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 8999998887775 6788999999999988543
No 206
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=45.47 E-value=15 Score=28.77 Aligned_cols=34 Identities=26% Similarity=0.355 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
+.||+++..+..| ..+|+.|.++||+|+++....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 4689998765544 478899999999999998754
No 207
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=45.21 E-value=94 Score=27.95 Aligned_cols=42 Identities=21% Similarity=0.208 Sum_probs=35.3
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICE 58 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~ 58 (471)
+..|+++..++.|-..-+..||..|+.+|++|.++....++.
T Consensus 98 ~~vi~i~G~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~r~ 139 (297)
T 1j8m_F 98 PYVIMLVGVQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYRP 139 (297)
T ss_dssp SEEEEEECSSCSSTTHHHHHHHHHHHHTTCCEEEEECCCSSS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCH
Confidence 345677777788999999999999999999999998876543
No 208
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=44.94 E-value=1.5e+02 Score=26.40 Aligned_cols=104 Identities=14% Similarity=0.055 Sum_probs=58.3
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCC-c-chhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTE-F-ICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE 91 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 91 (471)
+++||+++..+. || .+.+|..+-... ..+|..+.+. . .....++. |+.+..+|....
T Consensus 89 ~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~--------------gIp~~~~~~~~~-- 149 (286)
T 3n0v_A 89 HRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWH--------------KIPYYHFALDPK-- 149 (286)
T ss_dssp CCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHT--------------TCCEEECCCBTT--
T ss_pred CCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHc--------------CCCEEEeCCCcC--
Confidence 468998888666 43 455565555432 3677765443 2 33344444 888887754210
Q ss_pred CCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHHHcCCceEEEeCc
Q 012083 92 DDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~~ 157 (471)
+- ....+.+.+.+++ .+||+||.-.+.. -...+.+.+.-.++=++++
T Consensus 150 ----~r--------~~~~~~~~~~l~~-------~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 150 ----DK--------PGQERKVLQVIEE-------TGAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp ----BH--------HHHHHHHHHHHHH-------HTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred ----CH--------HHHHHHHHHHHHh-------cCCCEEEecccccccCHHHHhhhcCCeEEeccc
Confidence 10 0112233344454 7999999876543 4455556666667766543
No 209
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=44.92 E-value=1e+02 Score=27.30 Aligned_cols=34 Identities=3% Similarity=0.053 Sum_probs=25.8
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCC---eEEEEeCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRI---KVTFVTTE 54 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh---~Vt~~~~~ 54 (471)
+.|||.|+-.|..| .++++.|.+.|| +|++....
T Consensus 2 ~~~~I~iIG~G~mG-----~aia~~l~~~g~~~~~V~v~dr~ 38 (280)
T 3tri_A 2 NTSNITFIGGGNMA-----RNIVVGLIANGYDPNRICVTNRS 38 (280)
T ss_dssp CCSCEEEESCSHHH-----HHHHHHHHHTTCCGGGEEEECSS
T ss_pred CCCEEEEEcccHHH-----HHHHHHHHHCCCCCCeEEEEeCC
Confidence 34799999776555 467889999999 89887653
No 210
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=44.89 E-value=23 Score=31.45 Aligned_cols=33 Identities=24% Similarity=0.303 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
.|||++.. + |-+ -..|++.|.++||+|+.++..
T Consensus 3 ~~~ilVtG--a-G~i--G~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIAG--C-GDL--GLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEEC--C-SHH--HHHHHHHHHHTTCCEEEEECT
T ss_pred CCcEEEEC--C-CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 37888773 4 633 457889999999999998764
No 211
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=44.74 E-value=24 Score=29.43 Aligned_cols=44 Identities=9% Similarity=0.168 Sum_probs=23.6
Q ss_pred ccccCCCCcEEEEEcCCCcccHHHHHHHHHHHHh-CC--CeEEEEeC
Q 012083 10 SESLNKTNVHVLLVSFPAQGHVASLMKLAHRLAD-CR--IKVTFVTT 53 (471)
Q Consensus 10 ~~~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~-rG--h~Vt~~~~ 53 (471)
.++|..+++||||++.+=..---..-+|.+.+.. +| .+|.=+++
T Consensus 27 ~~~m~~~~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~~~~v~SAGt 73 (184)
T 4etn_A 27 GQQMGRGSMDIIFVCTGNTSRSPMAEALFKSIAEREGLNVNVRSAGV 73 (184)
T ss_dssp -------CEEEEEEESSSSSHHHHHHHHHHHHHHHHTCCEEEEEEET
T ss_pred ccccCCCCCEEEEECCCchhHHHHHHHHHHHHHHhcCCcEEEEeeec
Confidence 4557777899999998755554445567777765 33 44444444
No 212
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=44.66 E-value=1.4e+02 Score=25.22 Aligned_cols=103 Identities=11% Similarity=0.060 Sum_probs=54.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCc-chh---hhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEF-ICE---RIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE 91 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 91 (471)
+||+++..+..+ -+.+|.++..+. ..+|..+.+.. ... ..++. |+.+..++..-
T Consensus 3 ~riavl~Sg~Gs---nl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~--------------gIp~~~~~~~~--- 62 (211)
T 3p9x_A 3 KRVAIFASGSGT---NAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVH--------------EIPVCALDPKT--- 62 (211)
T ss_dssp CEEEEECCTTCH---HHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTT--------------TCCEEECCGGG---
T ss_pred CEEEEEEeCCch---HHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHc--------------CCCEEEeChhh---
Confidence 899888877543 356666666543 25777665542 222 22222 77766553210
Q ss_pred CCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHHHcCCceEEEeCc
Q 012083 92 DDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~~ 157 (471)
..+ .....+.+.+.+++ .+||+||+-.+.. -...+-+.....++-+.++
T Consensus 63 --~~~--------r~~~d~~~~~~l~~-------~~~Dliv~agy~~Il~~~~l~~~~~~~iNiHpS 112 (211)
T 3p9x_A 63 --YPS--------KEAYEIEVVQQLKE-------KQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPS 112 (211)
T ss_dssp --SSS--------HHHHHHHHHHHHHH-------TTCCEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred --cCc--------hhhhHHHHHHHHHh-------cCCCEEEEeCchhhcCHHHHhhccCCeEEECCc
Confidence 000 01112223344444 8999999876633 3444555555566666553
No 213
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=44.42 E-value=21 Score=32.52 Aligned_cols=32 Identities=19% Similarity=0.208 Sum_probs=26.1
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|||.|+-.|..| ..+|+.|++.||+|++....
T Consensus 22 ~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 22 MEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 899999776655 56889999999999987553
No 214
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=44.35 E-value=32 Score=26.26 Aligned_cols=34 Identities=12% Similarity=0.120 Sum_probs=23.5
Q ss_pred CCeeEEEECCCcc--hHHHHHHHc-------CCceEEEeCchH
Q 012083 126 EKITCVIADVTFG--WALQVAAKL-------ELKKASIYTSAP 159 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~l-------giP~v~~~~~~~ 159 (471)
.+||+||.|.... .+..+++.+ .+|.+.++....
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~~ 89 (136)
T 3t6k_A 47 NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQGD 89 (136)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTTC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCCC
Confidence 7899999998765 344444332 688888876543
No 215
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=44.33 E-value=93 Score=27.83 Aligned_cols=79 Identities=14% Similarity=0.160 Sum_probs=49.6
Q ss_pred CeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCC
Q 012083 46 IKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEED 125 (471)
Q Consensus 46 h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~ 125 (471)
.+..+++++.+.-..... |++...+.. ..++ . .-....+.++++.+++
T Consensus 179 ~~~~v~~H~af~Yf~~~y--------------Gl~~~~~~~-~~~~-~------------eps~~~l~~l~~~ik~---- 226 (286)
T 3gi1_A 179 SKTFVTQHTAFSYLAKRF--------------GLKQLGISG-ISPE-Q------------EPSPRQLKEIQDFVKE---- 226 (286)
T ss_dssp CCEEEEEESCCHHHHHHT--------------TCEEEEEEC-SCC----------------CCHHHHHHHHHHHHH----
T ss_pred CCEEEEECCchHHHHHHC--------------CCeEeeccc-cCCC-C------------CCCHHHHHHHHHHHHH----
Confidence 445566777777777777 777665422 1111 0 1122234445555555
Q ss_pred CCeeEEEECCCcc--hHHHHHHHcCCceEEEeC
Q 012083 126 EKITCVIADVTFG--WALQVAAKLELKKASIYT 156 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~ 156 (471)
.+..+|+++.... .+-.+|+..|++.+.+.+
T Consensus 227 ~~v~~if~e~~~~~~~~~~la~~~g~~v~~l~p 259 (286)
T 3gi1_A 227 YNVKTIFAEDNVNPKIAHAIAKSTGAKVKTLSP 259 (286)
T ss_dssp TTCCEEEECTTSCTHHHHHHHHTTTCEEEECCC
T ss_pred cCCCEEEEeCCCChHHHHHHHHHhCCeEEEecc
Confidence 8999999998766 556789999999987643
No 216
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=44.17 E-value=18 Score=32.81 Aligned_cols=34 Identities=12% Similarity=0.246 Sum_probs=26.3
Q ss_pred ccccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEE
Q 012083 10 SESLNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFV 51 (471)
Q Consensus 10 ~~~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~ 51 (471)
|.+|. .||.|+-.+..|. ++|+.|.++||+|++.
T Consensus 1 s~~Ms---~kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~ 34 (297)
T 4gbj_A 1 SNAMS---EKIAFLGLGNLGT-----PIAEILLEAGYELVVW 34 (297)
T ss_dssp ---CC---CEEEEECCSTTHH-----HHHHHHHHTTCEEEEC
T ss_pred CCCCC---CcEEEEecHHHHH-----HHHHHHHHCCCeEEEE
Confidence 34562 3899999998884 6899999999999975
No 217
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=44.16 E-value=1.7e+02 Score=26.18 Aligned_cols=81 Identities=14% Similarity=0.120 Sum_probs=52.7
Q ss_pred eEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCC
Q 012083 47 KVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDE 126 (471)
Q Consensus 47 ~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~ 126 (471)
+..+++++.+.-..... |++...+... . ..-....+.++++.+++ .
T Consensus 191 ~~~v~~H~af~Yf~~~y--------------Gl~~~~~~~~---~-------------~eps~~~l~~l~~~ik~----~ 236 (291)
T 1pq4_A 191 RKFIVFHPSWAYFARDY--------------NLVQIPIEVE---G-------------QEPSAQELKQLIDTAKE----N 236 (291)
T ss_dssp CEEEESSCCCHHHHHHT--------------TCEEEESCBT---T-------------BCCCHHHHHHHHHHHHT----T
T ss_pred CEEEEECCchHHHHHHC--------------CCEEeecccC---C-------------CCCCHHHHHHHHHHHHH----c
Confidence 44566666777666666 7777665321 0 01123335555666665 8
Q ss_pred CeeEEEECCCcc--hHHHHHHHcCCceEEEeCchHHH
Q 012083 127 KITCVIADVTFG--WALQVAAKLELKKASIYTSAPGI 161 (471)
Q Consensus 127 ~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~ 161 (471)
+..+|+++.... .+-.+|+..|++.+.+.+....+
T Consensus 237 ~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l~~~Y 273 (291)
T 1pq4_A 237 NLTMVFGETQFSTKSSEAIAAEIGAGVELLDPLAADW 273 (291)
T ss_dssp TCCEEEEETTSCCHHHHHHHHHHTCEEEEECTTCSSH
T ss_pred CCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCchhhH
Confidence 999999988766 56679999999999887655433
No 218
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=42.99 E-value=74 Score=24.63 Aligned_cols=62 Identities=6% Similarity=-0.025 Sum_probs=40.4
Q ss_pred cCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHH
Q 012083 381 MGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELA 448 (471)
Q Consensus 381 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~ 448 (471)
..+|++++--..+ ........+ .|+--.+. ..++.++|..+|+.++....++...+++++.+
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~-~g~~~~l~----kP~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~ 135 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQ-DGAYDFIA----KPFAADRLVQSARRAEEKRRLVMENRSLRRAA 135 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHH-TTCCEEEE----SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHh-cCCCeEEe----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788888754444 334444455 47766664 56799999999999997765555444444443
No 219
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=42.87 E-value=16 Score=32.69 Aligned_cols=32 Identities=13% Similarity=0.024 Sum_probs=25.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|||+|+..|..|. .+|..|.++||+|+++...
T Consensus 1 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALGQ-----LWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHHH-----HHHHHHHhCCCCEEEEEcC
Confidence 4899987766663 6789999999999998654
No 220
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=42.80 E-value=1.6e+02 Score=27.93 Aligned_cols=141 Identities=15% Similarity=0.113 Sum_probs=75.3
Q ss_pred CcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCccee
Q 012083 286 GSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVAC 365 (471)
Q Consensus 286 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~ 365 (471)
.+.|-|-+|| ..+-....++...|+..+..+-+.+.+- ..+|+...+ ++-+..--..+.|
T Consensus 265 ~~~V~Ii~gs--~SD~~~~~~a~~~l~~~gi~~~v~V~sa------HR~p~~~~~----------~~~~~~~~g~~~v-- 324 (425)
T 2h31_A 265 QCRVVVLMGS--TSDLGHCEKIKKACGNFGIPCELRVTSA------HKGPDETLR----------IKAEYEGDGIPTV-- 324 (425)
T ss_dssp CCEEEEEESC--GGGHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHH----------HHHHHHTTCCCEE--
T ss_pred CCeEEEEecC--cccHHHHHHHHHHHHHcCCceEEeeeec------cCCHHHHHH----------HHHHHHHCCCCeE--
Confidence 3567777777 4456667788888999998876655433 234444221 1111000000123
Q ss_pred eeeccCcc----hhhHhhhcCCceeecccccchhhhHHHHH--h--hhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHH
Q 012083 366 YLTHCGWN----STMEGISMGVPFLCWPWGHDHLYIKSCIC--D--DWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVV 437 (471)
Q Consensus 366 ~ItHgG~~----s~~eal~~GvP~l~~P~~~DQ~~na~~v~--~--~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~ 437 (471)
+|.=+|.. ++..++ .-+|+|.+|....-.-....+. + . |+.+..-- ...+..-++..|- -+.|+.+
T Consensus 325 iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~vqmp~-g~pvatv~---~~~nAa~~A~~Il-~~~~~~l 398 (425)
T 2h31_A 325 FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSLRLPS-GLGCSTVL---SPEGSAQFAAQIF-GLSNHLV 398 (425)
T ss_dssp EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTSSCCS-SCCCEECC---CHHHHHHHHHHHH-HTTCHHH
T ss_pred EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHhcCCC-CCceEEec---CchHHHHHHHHHH-ccCCHHH
Confidence 77666643 444444 4789999997421111111111 1 1 44433221 2334444454443 5678888
Q ss_pred HHHHHHHHHHHHHHh
Q 012083 438 RKNALKLKELAQKSV 452 (471)
Q Consensus 438 ~~~a~~l~~~~~~~~ 452 (471)
+++.+..+...+..+
T Consensus 399 ~~kl~~~~~~~~~~v 413 (425)
T 2h31_A 399 WSKLRASILNTWISL 413 (425)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888888777653
No 221
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=42.49 E-value=36 Score=30.06 Aligned_cols=34 Identities=18% Similarity=0.036 Sum_probs=25.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
|||++.. + |.+- ..|+++|.++||+|+.++-...
T Consensus 6 ~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 6 GTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESCGG
T ss_pred CcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcChh
Confidence 6887774 4 6554 4678999999999999887543
No 222
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=42.42 E-value=90 Score=29.99 Aligned_cols=34 Identities=12% Similarity=0.141 Sum_probs=24.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
+|||++.. |. -.+.+++++++.|++|..+.....
T Consensus 7 k~ILI~g~---g~--~~~~i~~a~~~~G~~vv~v~~~~~ 40 (461)
T 2dzd_A 7 RKVLVANR---GE--IAIRVFRACTELGIRTVAIYSKED 40 (461)
T ss_dssp SEEEECSC---HH--HHHHHHHHHHHHTCEEEEEECGGG
T ss_pred cEEEEECC---cH--HHHHHHHHHHHcCCEEEEEECCcc
Confidence 57887732 32 356789999999999998866443
No 223
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=42.10 E-value=28 Score=31.76 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=25.7
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhC-C-CeEEEEeCC
Q 012083 15 KTNVHVLLVSFPAQGHVASLMKLAHRLADC-R-IKVTFVTTE 54 (471)
Q Consensus 15 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~r-G-h~Vt~~~~~ 54 (471)
|++|||+++..+.. .++++.|++. | ++|..+...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 36789999866654 4789999886 7 888877554
No 224
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=41.94 E-value=33 Score=25.65 Aligned_cols=37 Identities=8% Similarity=0.050 Sum_probs=27.6
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVT 52 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~ 52 (471)
++|||++++..+.|--.-.-.+=++..++|.+|.+..
T Consensus 5 ~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 3579999998887766655566666667899998854
No 225
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=41.91 E-value=20 Score=32.34 Aligned_cols=37 Identities=8% Similarity=0.073 Sum_probs=28.0
Q ss_pred cEEEEEcCCCccc---HHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGH---VASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH---~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|||+|+..+.... ......++++|.++||+|.++...
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 6999999874321 233467999999999999988764
No 226
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=41.89 E-value=17 Score=33.64 Aligned_cols=38 Identities=8% Similarity=0.140 Sum_probs=28.0
Q ss_pred CCcEEEEEcCCCcccHH----HHHHHHHHHHhCCCeEEEEeC
Q 012083 16 TNVHVLLVSFPAQGHVA----SLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~----p~~~La~~L~~rGh~Vt~~~~ 53 (471)
+|+||+++..+..+-.. ....++++|.+.||+|..+..
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGI 43 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEE
Confidence 46899888855443333 456789999999999998764
No 227
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=41.67 E-value=1.4e+02 Score=24.32 Aligned_cols=147 Identities=16% Similarity=0.121 Sum_probs=77.9
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceee
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACY 366 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ 366 (471)
+.|-|-+|| ..+....++....|+..+..+-+.+.+- ...|+.+.+.. -. .....++++
T Consensus 13 ~~V~IimGS--~SD~~v~~~a~~~L~~~Gi~~ev~V~Sa------HR~p~~~~~~~----------~~---a~~~g~~Vi 71 (174)
T 3kuu_A 13 VKIAIVMGS--KSDWATMQFAADVLTTLNVPFHVEVVSA------HRTPDRLFSFA----------EQ---AEANGLHVI 71 (174)
T ss_dssp CCEEEEESS--GGGHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHHHH----------HH---TTTTTCSEE
T ss_pred CcEEEEECc--HHHHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHHHHH----------HH---HHhCCCcEE
Confidence 356666676 4456667788889999998876666433 23444432211 10 011223347
Q ss_pred eeccCcc----hhhHhhhcCCceeecccccchh-hhH--HHHHh-hhcceeee-cCCCCCCcCHhHHHHHHHHHhCcHHH
Q 012083 367 LTHCGWN----STMEGISMGVPFLCWPWGHDHL-YIK--SCICD-DWKIGLWL-EPDDNGIIGRHEIKRKVDELLSNDVV 437 (471)
Q Consensus 367 ItHgG~~----s~~eal~~GvP~l~~P~~~DQ~-~na--~~v~~-~~G~G~~~-~~~~~~~~~~~~l~~~i~~ll~~~~~ 437 (471)
|.=+|.. ++..+ ..-+|+|.+|...-.. ... .-+.+ .-|+.+.. ..++.+.++..-+...| --+.|+++
T Consensus 72 Ia~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~I-La~~d~~l 149 (174)
T 3kuu_A 72 IAGNGGAAHLPGMLAA-KTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQI-LALHDTEL 149 (174)
T ss_dssp EEEEESSCCHHHHHHH-TCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHH-HHTTCHHH
T ss_pred EEECChhhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHH-HcCCCHHH
Confidence 7766643 33333 3358999999753211 111 11111 01543222 21000122333344344 34578999
Q ss_pred HHHHHHHHHHHHHHhhcCC
Q 012083 438 RKNALKLKELAQKSVTKEG 456 (471)
Q Consensus 438 ~~~a~~l~~~~~~~~~~gg 456 (471)
+++.+.+++..++.+.+..
T Consensus 150 ~~kl~~~r~~~~~~v~~~~ 168 (174)
T 3kuu_A 150 AGRLAHWRQSQTDDVLDNP 168 (174)
T ss_dssp HHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHhCc
Confidence 9999999999988765543
No 228
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=41.62 E-value=38 Score=25.04 Aligned_cols=34 Identities=9% Similarity=0.144 Sum_probs=23.4
Q ss_pred CCeeEEEECCCcc--hHHHHHH----HcCCceEEEeCchH
Q 012083 126 EKITCVIADVTFG--WALQVAA----KLELKKASIYTSAP 159 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~----~lgiP~v~~~~~~~ 159 (471)
.+||+||.|.... .+..+++ ..++|.+.++....
T Consensus 45 ~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~ 84 (120)
T 3f6p_A 45 LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDS 84 (120)
T ss_dssp TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCC
Confidence 7999999998765 3444443 34789888776443
No 229
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=41.54 E-value=18 Score=32.95 Aligned_cols=34 Identities=9% Similarity=0.160 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCC-eEEEEeCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRI-KVTFVTTE 54 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh-~Vt~~~~~ 54 (471)
+.|||.|+-.|..| ..+|+.|++.|| +|++....
T Consensus 23 ~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcCC
Confidence 34899999877666 478999999999 99988663
No 230
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=41.49 E-value=42 Score=26.48 Aligned_cols=97 Identities=14% Similarity=0.138 Sum_probs=57.8
Q ss_pred EEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccHHHH
Q 012083 21 LLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDEAKM 100 (471)
Q Consensus 21 l~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 100 (471)
+|++... .+=.-++.+|+.|.+.|+++ +++......+++. |+....+....... +
T Consensus 27 vliSv~d-~dK~~l~~~a~~l~~lGf~i--~AT~GTa~~L~~~--------------Gi~v~~v~k~~egg----~---- 81 (143)
T 2yvq_A 27 ILIGIQQ-SFRPRFLGVAEQLHNEGFKL--FATEATSDWLNAN--------------NVPATPVAWPSQEG----Q---- 81 (143)
T ss_dssp EEEECCG-GGHHHHHHHHHHHHTTTCEE--EEEHHHHHHHHHT--------------TCCCEEECCGGGC----------
T ss_pred EEEEecc-cchHHHHHHHHHHHHCCCEE--EECchHHHHHHHc--------------CCeEEEEEeccCCC----c----
Confidence 5555443 45677889999999999974 3344555667665 55555443211100 0
Q ss_pred HHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc--------hHHHHHHHcCCceEEE
Q 012083 101 TRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG--------WALQVAAKLELKKASI 154 (471)
Q Consensus 101 ~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--------~~~~~A~~lgiP~v~~ 154 (471)
....+.+.++++. .+.|+||-..-.. .-...|-.++||++..
T Consensus 82 -----~~~~~~i~d~i~~-------g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 82 -----NPSLSSIRKLIRD-------GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp --------CBCHHHHHHT-------TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred -----ccccccHHHHHHC-------CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 0000334445555 8999999755331 2346788999999873
No 231
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=41.34 E-value=13 Score=31.96 Aligned_cols=33 Identities=18% Similarity=0.266 Sum_probs=25.6
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
+.|||.|+-.|..| ..+|+.|.+.||+|+++..
T Consensus 22 ~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 22 SMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred cCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 44899999866555 4678899999999998544
No 232
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=41.27 E-value=20 Score=31.54 Aligned_cols=42 Identities=17% Similarity=0.205 Sum_probs=34.3
Q ss_pred CcEEEEEcCC---CcccHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 012083 17 NVHVLLVSFP---AQGHVASLMKLAHRLADCRIKVTFVTTEFICE 58 (471)
Q Consensus 17 ~~~Il~~~~~---~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~ 58 (471)
+||.+|++.+ +-|--.-...|+.-|..||++||..=.+++..
T Consensus 22 ~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYlN 66 (294)
T 2c5m_A 22 SMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYIN 66 (294)
T ss_dssp CCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBCC
T ss_pred ceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCcee
Confidence 4799999977 55667788999999999999999876666543
No 233
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=40.92 E-value=1.1e+02 Score=26.94 Aligned_cols=35 Identities=20% Similarity=0.126 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
+.|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 23 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 23 RPQTAFVTGVSSG---IGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp --CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3567777766553 3357899999999999887654
No 234
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=40.91 E-value=38 Score=29.72 Aligned_cols=37 Identities=11% Similarity=0.020 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCc--ccHHHHHH-HHHHHHhCCCeEEEEeC
Q 012083 17 NVHVLLVSFPAQ--GHVASLMK-LAHRLADCRIKVTFVTT 53 (471)
Q Consensus 17 ~~~Il~~~~~~~--GH~~p~~~-La~~L~~rGh~Vt~~~~ 53 (471)
.|||+++....+ |...-++. +++.|.+.|++|.++--
T Consensus 34 ~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 34 RPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 489988886654 55555554 56667778999988654
No 235
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=40.79 E-value=76 Score=26.07 Aligned_cols=113 Identities=7% Similarity=0.007 Sum_probs=62.8
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEE---eccchhhhhccCcc
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMV---KWAPQEKVLAHPSV 363 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~---~~vpq~~lL~~~~~ 363 (471)
.+++.-.|+..... ...+++.|.+.++.+-+.+... ....+.....+...+.++.- .|+++-.+-..+++
T Consensus 7 ~IllgvTGs~aa~k---~~~ll~~L~~~g~~V~vv~T~~----A~~fi~~~~l~~l~~~v~~~~~~~~~~hi~l~~~aD~ 79 (175)
T 3qjg_A 7 NVLICLCGSVNSIN---ISHYIIELKSKFDEVNVIASTN----GRKFINGEILKQFCDNYYDEFEDPFLNHVDIANKHDK 79 (175)
T ss_dssp EEEEEECSSGGGGG---HHHHHHHHTTTCSEEEEEECTG----GGGGSCHHHHHHHCSCEECTTTCTTCCHHHHHHTCSE
T ss_pred EEEEEEeCHHHHHH---HHHHHHHHHHCCCEEEEEECcC----HHHHhhHHHHHHhcCCEEecCCCCccccccccchhCE
Confidence 46666667765432 3456667766777766555443 12233332233333433211 23445444443443
Q ss_pred eeeeeccCcchhhH-------------hhhcCCceeeccccc----c---hhhhHHHHHhhhcce
Q 012083 364 ACYLTHCGWNSTME-------------GISMGVPFLCWPWGH----D---HLYIKSCICDDWKIG 408 (471)
Q Consensus 364 ~~~ItHgG~~s~~e-------------al~~GvP~l~~P~~~----D---Q~~na~~v~~~~G~G 408 (471)
.+|--|-.||+.- ++..++|+++.|-.. . ...|-.++.+ +|+=
T Consensus 80 -~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~ 142 (175)
T 3qjg_A 80 -IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKD-YGVS 142 (175)
T ss_dssp -EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHH-TTCE
T ss_pred -EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHH-CCCE
Confidence 5777787776543 477899999999421 1 1347777777 5753
No 236
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=40.31 E-value=15 Score=34.38 Aligned_cols=38 Identities=8% Similarity=0.064 Sum_probs=27.5
Q ss_pred CCcEEEEEcCCCcccH----HHHHHHHHHHHhCCCeEEEEeC
Q 012083 16 TNVHVLLVSFPAQGHV----ASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~----~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
+||||+++..+..+.. .-...++++|.++||+|..+..
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYI 43 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEE
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEE
Confidence 4689988886544433 2347788999999999998864
No 237
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=40.13 E-value=26 Score=31.31 Aligned_cols=33 Identities=9% Similarity=0.218 Sum_probs=25.4
Q ss_pred CcEEEEEcC-CCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 17 NVHVLLVSF-PAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 17 ~~~Il~~~~-~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
.|||+|+.. |..| ..+|+.|.++||+|+++...
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECCS
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 379999977 6555 45788899999999976543
No 238
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=40.07 E-value=31 Score=26.71 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=23.1
Q ss_pred CCeeEEEECCCcc--hHHHHHHHc---------CCceEEEeCch
Q 012083 126 EKITCVIADVTFG--WALQVAAKL---------ELKKASIYTSA 158 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~l---------giP~v~~~~~~ 158 (471)
.+||+||.|.... -+..+++.+ .+|.+.++...
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV 100 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC
Confidence 7899999998765 355555443 37888877643
No 239
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=40.07 E-value=37 Score=32.81 Aligned_cols=42 Identities=17% Similarity=0.307 Sum_probs=34.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHh-CCCeEEEEeCCcchhh
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLAD-CRIKVTFVTTEFICER 59 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~-rGh~Vt~~~~~~~~~~ 59 (471)
--+++...|+.|=..-++.+|..++. .|..|.+++.......
T Consensus 204 ~liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s~~~ 246 (454)
T 2r6a_A 204 DLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQ 246 (454)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCHHH
Confidence 35778888899999999999999886 6899999998765443
No 240
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=39.98 E-value=85 Score=26.65 Aligned_cols=37 Identities=24% Similarity=0.214 Sum_probs=25.8
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
+.|+|++.. +.|.+- ..|+++|.++||+|+.++-...
T Consensus 20 ~~~~ilVtG--atG~iG--~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVVG--ANGKVA--RYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCeEEEEC--CCChHH--HHHHHHHHhCCCeEEEEECChH
Confidence 467877664 444433 4788999999999999886543
No 241
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=39.74 E-value=55 Score=31.56 Aligned_cols=33 Identities=27% Similarity=0.267 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
+.+||+|+-.+..|= ++|+.|+++||+|+..=.
T Consensus 8 ~~k~v~viG~G~sG~-----s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 8 ENKKVLVLGLARSGE-----AAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTCEEEEECCTTTHH-----HHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEeeCHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 457999999876653 459999999999998754
No 242
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=39.72 E-value=1.5e+02 Score=24.06 Aligned_cols=145 Identities=12% Similarity=0.082 Sum_probs=79.9
Q ss_pred CcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCccee
Q 012083 286 GSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVAC 365 (471)
Q Consensus 286 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~ 365 (471)
+|.|-|-+|| ..+....++....|+..+..+-+.+.+- ...|+.+.+.. .+. ....++.
T Consensus 11 ~~~V~IimGS--~SD~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~~~----------~~a---~~~g~~V 69 (170)
T 1xmp_A 11 KSLVGVIMGS--TSDWETMKYACDILDELNIPYEKKVVSA------HRTPDYMFEYA----------ETA---RERGLKV 69 (170)
T ss_dssp CCSEEEEESS--GGGHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHHH----------HHT---TTTTCCE
T ss_pred CCcEEEEECc--HHHHHHHHHHHHHHHHcCCCEEEEEEec------cCCHHHHHHHH----------HHH---HhCCCcE
Confidence 4567777777 4456667888889999998876655433 23444432111 100 0111334
Q ss_pred eeeccCcc----hhhHhhhcCCceeecccccc--hhhhHH-HHHh--hhcceee-ecCCCCCCcCHhHHHHHHHHHhCcH
Q 012083 366 YLTHCGWN----STMEGISMGVPFLCWPWGHD--HLYIKS-CICD--DWKIGLW-LEPDDNGIIGRHEIKRKVDELLSND 435 (471)
Q Consensus 366 ~ItHgG~~----s~~eal~~GvP~l~~P~~~D--Q~~na~-~v~~--~~G~G~~-~~~~~~~~~~~~~l~~~i~~ll~~~ 435 (471)
+|.=+|.- ++..++ .-+|+|.+|.... ....+. -+.+ . |+.+. +..++.+.++..-++..|- -+.|+
T Consensus 70 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~ 146 (170)
T 1xmp_A 70 IIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GSFHD 146 (170)
T ss_dssp EEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HTTCH
T ss_pred EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-ccCCH
Confidence 77766643 333333 4689999998542 111111 1122 2 55532 2221002234444554443 56789
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 012083 436 VVRKNALKLKELAQKSVTK 454 (471)
Q Consensus 436 ~~~~~a~~l~~~~~~~~~~ 454 (471)
+++++.+.++++.++.+.+
T Consensus 147 ~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 147 DIHDALELRREAIEKDVRE 165 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999887554
No 243
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=39.60 E-value=70 Score=30.68 Aligned_cols=32 Identities=19% Similarity=0.277 Sum_probs=24.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
+||+++.. | .....+++++.+.|++|.++.+.
T Consensus 2 k~ilI~g~---g--~~~~~i~~a~~~~G~~vv~v~~~ 33 (451)
T 2vpq_A 2 KKVLIANR---G--EIAVRIIRACRDLGIQTVAIYSE 33 (451)
T ss_dssp CEEEECCC---H--HHHHHHHHHHHHTTCEEEEEEEG
T ss_pred ceEEEeCC---C--HHHHHHHHHHHHcCCEEEEEecc
Confidence 57887652 2 24567899999999999988654
No 244
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=39.59 E-value=19 Score=34.04 Aligned_cols=42 Identities=10% Similarity=0.086 Sum_probs=29.7
Q ss_pred cccCCCCcEEEEEcCCCcccHHHH----HHHHHHHHhCCCeEEEEeCC
Q 012083 11 ESLNKTNVHVLLVSFPAQGHVASL----MKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 11 ~~m~~~~~~Il~~~~~~~GH~~p~----~~La~~L~~rGh~Vt~~~~~ 54 (471)
++| +++||+++..|..+--.-. ..++++|.+.||+|+.+...
T Consensus 18 ~~m--~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 18 GHM--RKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp -----CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred hhc--CCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 446 6789988887766544443 48889998999999988654
No 245
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=39.55 E-value=54 Score=28.68 Aligned_cols=37 Identities=16% Similarity=0.225 Sum_probs=28.4
Q ss_pred cEEEEEcCCCc----------c-cHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQ----------G-HVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~----------G-H~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
+||+++-.... | ...=++.--..|.+.|++|+++++.
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 68988877632 3 2445777788999999999999974
No 246
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=38.56 E-value=1.8e+02 Score=26.10 Aligned_cols=39 Identities=18% Similarity=0.085 Sum_probs=27.4
Q ss_pred ccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 12 SLNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 12 ~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
+|..-+-|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 21 ~m~~l~gk~vlVTGas~G---IG~aia~~la~~G~~Vv~~~r 59 (322)
T 3qlj_A 21 SMGVVDGRVVIVTGAGGG---IGRAHALAFAAEGARVVVNDI 59 (322)
T ss_dssp -CCTTTTCEEEETTTTSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred hhcccCCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 354444577888766543 235789999999999998754
No 247
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=38.42 E-value=1.4e+02 Score=26.32 Aligned_cols=35 Identities=20% Similarity=0.038 Sum_probs=25.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
.|+++++.++.| --.++|++|+++|++|.++....
T Consensus 28 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~~ 62 (283)
T 3v8b_A 28 SPVALITGAGSG---IGRATALALAADGVTVGALGRTR 62 (283)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 467777766553 24678999999999999886543
No 248
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=38.27 E-value=15 Score=33.47 Aligned_cols=29 Identities=14% Similarity=0.162 Sum_probs=23.4
Q ss_pred cceeeeeccCcchhhHhhhc----CCceeeccc
Q 012083 362 SVACYLTHCGWNSTMEGISM----GVPFLCWPW 390 (471)
Q Consensus 362 ~~~~~ItHgG~~s~~eal~~----GvP~l~~P~ 390 (471)
.++++|+-||-||+.++++. ++|++.++.
T Consensus 75 ~~d~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 75 GCELVLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp -CCCEEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCCEEEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 34559999999999999765 899988863
No 249
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=38.04 E-value=1.5e+02 Score=26.78 Aligned_cols=79 Identities=16% Similarity=0.160 Sum_probs=50.4
Q ss_pred CeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCC
Q 012083 46 IKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEED 125 (471)
Q Consensus 46 h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~ 125 (471)
.+..+++++.+.-..... |++...+.. ..++ ... ....+.++++.+++
T Consensus 190 ~~~~v~~H~af~Yfa~~y--------------Gl~~~~~~~-~~~~-~ep------------s~~~l~~l~~~ik~---- 237 (312)
T 2o1e_A 190 KKEFITQHTAFGYLAKEY--------------GLKQVPIAG-LSPD-QEP------------SAASLAKLKTYAKE---- 237 (312)
T ss_dssp CCEEEESSCTTHHHHHHT--------------TCEEEECSS-CCSS-SCC------------CHHHHHHHHHHTTS----
T ss_pred CCEEEEECCchHHHHHHC--------------CCeEEEeec-cCCC-CCC------------CHHHHHHHHHHHHH----
Confidence 345566677777666666 777765522 1111 111 22335556666666
Q ss_pred CCeeEEEECCCcc--hHHHHHHHcCCceEEEeC
Q 012083 126 EKITCVIADVTFG--WALQVAAKLELKKASIYT 156 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~ 156 (471)
.+..+|+++.... .+-.+|+..|++.+.+.+
T Consensus 238 ~~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~~ 270 (312)
T 2o1e_A 238 HNVKVIYFEEIASSKVADTLASEIGAKTEVLNT 270 (312)
T ss_dssp SCCCEEECSSCCCHHHHHHHHHHTCCEEECCCC
T ss_pred cCCCEEEEeCCCChHHHHHHHHHhCCcEEEecc
Confidence 8999999998776 467799999999877643
No 250
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=37.99 E-value=14 Score=31.62 Aligned_cols=33 Identities=12% Similarity=0.205 Sum_probs=24.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
|||+++.. |.+ -..+|+.|.++||+|+++....
T Consensus 1 M~iiIiG~---G~~--G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGG---ETT--AYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECC---HHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC---CHH--HHHHHHHHHhCCCeEEEEECCH
Confidence 47888764 332 4578999999999999987643
No 251
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=37.90 E-value=60 Score=31.77 Aligned_cols=42 Identities=14% Similarity=0.010 Sum_probs=35.2
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCcchhhh
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLADC-RIKVTFVTTEFICERI 60 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~r-Gh~Vt~~~~~~~~~~~ 60 (471)
=+++...|+.|=..-++.+|..++.+ |..|.+++.+...+.+
T Consensus 244 l~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~l 286 (503)
T 1q57_A 244 VIMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEET 286 (503)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHHH
T ss_pred EEEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHHH
Confidence 36777788999999999999999987 9999999988765543
No 252
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=37.88 E-value=35 Score=29.96 Aligned_cols=37 Identities=14% Similarity=0.124 Sum_probs=31.1
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
+.|.|..-|+-|=..-...||..|+++|++|.++=..
T Consensus 2 ~vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred cEEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 4566766778899999999999999999999988444
No 253
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=37.85 E-value=1.4e+02 Score=28.55 Aligned_cols=42 Identities=17% Similarity=0.112 Sum_probs=35.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhh
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICER 59 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~ 59 (471)
..|+++..++.|-..-+..||..|+.+|++|.++..+.+...
T Consensus 99 ~vi~i~G~~GsGKTT~~~~LA~~l~~~g~~Vllvd~D~~r~a 140 (425)
T 2ffh_A 99 NLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPA 140 (425)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCSSCHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEeeccccCch
Confidence 456777777889999999999999999999999988766543
No 254
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=37.85 E-value=26 Score=29.66 Aligned_cols=32 Identities=13% Similarity=0.242 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
.|||.|+..+..| ..+|..|.++||+|+++..
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 4799999766555 5678899999999998754
No 255
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=37.80 E-value=22 Score=27.66 Aligned_cols=33 Identities=15% Similarity=0.086 Sum_probs=25.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
+||+++.. |.+ -..+++.|.++||+|+++....
T Consensus 7 ~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECCH
Confidence 68888865 443 4578999999999999987643
No 256
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=37.76 E-value=34 Score=29.54 Aligned_cols=41 Identities=12% Similarity=0.148 Sum_probs=33.4
Q ss_pred cHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeC
Q 012083 109 PGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYT 156 (471)
Q Consensus 109 ~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~ 156 (471)
.+..++.+.++++ .+.|+||.|. .+..+|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~----~G~~vVVG~~---~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKA----NGTEAVVGAG---LITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHH----TTCCEEEESH---HHHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHH----CCCCEEECCH---HHHHHHHHcCCcEEEECC
Confidence 4456777777777 8999999984 457899999999999884
No 257
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=37.64 E-value=53 Score=29.31 Aligned_cols=38 Identities=11% Similarity=-0.023 Sum_probs=28.0
Q ss_pred CcEEEEEcCCCcc-cHH---HHHHHHHHHHhCCCeEEEEeCC
Q 012083 17 NVHVLLVSFPAQG-HVA---SLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 17 ~~~Il~~~~~~~G-H~~---p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
+|||+++..+... |-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 4799998865432 222 3457999999999999988765
No 258
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=37.57 E-value=50 Score=28.86 Aligned_cols=37 Identities=16% Similarity=0.287 Sum_probs=28.1
Q ss_pred cEEEEEcCCCc----------c-cHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQ----------G-HVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~----------G-H~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
+||+++..... | ...=++.....|.+.|++|+++++.
T Consensus 4 ~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 4 KRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp CEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 68988877532 3 2345777788999999999999974
No 259
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=37.52 E-value=33 Score=29.76 Aligned_cols=30 Identities=10% Similarity=-0.087 Sum_probs=24.1
Q ss_pred CCeeEEEECCCcc-------hHHHHHHHcCCceEEEe
Q 012083 126 EKITCVIADVTFG-------WALQVAAKLELKKASIY 155 (471)
Q Consensus 126 ~~pD~vV~D~~~~-------~~~~~A~~lgiP~v~~~ 155 (471)
.+||+|++|.... -|..+.-.+++|+|.+.
T Consensus 106 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 106 CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred CCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 6899999998755 24567788899999974
No 260
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=37.43 E-value=63 Score=27.34 Aligned_cols=43 Identities=12% Similarity=-0.039 Sum_probs=30.1
Q ss_pred ccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEE
Q 012083 278 SWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLC 320 (471)
Q Consensus 278 ~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 320 (471)
+|+.+...+.++||..+|......+.+....++|++++..+.+
T Consensus 20 ~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~ 62 (206)
T 3l4e_A 20 EFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEE 62 (206)
T ss_dssp HHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 4543333456999998875434456778899999999987553
No 261
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=37.36 E-value=34 Score=31.56 Aligned_cols=73 Identities=10% Similarity=0.138 Sum_probs=43.9
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHh
Q 012083 299 LSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEG 378 (471)
Q Consensus 299 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~ea 378 (471)
.+.+....+.+++.....+.||.+.+.- +-.++.+++....+-++|+. ||-+.-....+-+
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-----------------g~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~a 122 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGY-----------------NSNGLLKYLDYDLIRENPKF--FCGYSDITALNNA 122 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS-----------------CGGGGGGGCCHHHHHTSCCE--EEECGGGHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc-----------------cHHHHHhhcChhHHHhCCeE--EEEecchHHHHHH
Confidence 3556677788888888888888887651 11123344444455555655 6666665555555
Q ss_pred hh--cCCceeeccc
Q 012083 379 IS--MGVPFLCWPW 390 (471)
Q Consensus 379 l~--~GvP~l~~P~ 390 (471)
++ .|++.+-=|.
T Consensus 123 l~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 123 IYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHCBCEEECCC
T ss_pred HHHhhCCcEEEccc
Confidence 55 3665555444
No 262
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=37.34 E-value=2.1e+02 Score=25.01 Aligned_cols=30 Identities=17% Similarity=0.132 Sum_probs=21.1
Q ss_pred CCeeEEEECCCcch----HHHHHHHcCCceEEEe
Q 012083 126 EKITCVIADVTFGW----ALQVAAKLELKKASIY 155 (471)
Q Consensus 126 ~~pD~vV~D~~~~~----~~~~A~~lgiP~v~~~ 155 (471)
.++|.||....... ....+...|||+|.+.
T Consensus 60 ~~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~ 93 (297)
T 3rot_A 60 TYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVD 93 (297)
T ss_dssp TCCSEEEECCCCSSTTHHHHHHHHHHTCCEEEES
T ss_pred cCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEc
Confidence 68999987655432 3345667799999974
No 263
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=37.21 E-value=27 Score=25.82 Aligned_cols=33 Identities=18% Similarity=0.279 Sum_probs=24.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCC-CeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCR-IKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rG-h~Vt~~~~~~ 55 (471)
++|+++.. |.+- ..+++.|.++| |+|+++....
T Consensus 6 ~~v~I~G~---G~iG--~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGA---GKIG--QMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECC---SHHH--HHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECC---CHHH--HHHHHHHHhCCCceEEEEeCCH
Confidence 68888854 4332 46788999999 9998877643
No 264
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=36.91 E-value=1.7e+02 Score=23.83 Aligned_cols=145 Identities=11% Similarity=0.083 Sum_probs=76.2
Q ss_pred CcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCccee
Q 012083 286 GSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVAC 365 (471)
Q Consensus 286 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~ 365 (471)
.|.|-|-+|| ..+-...++....|+..+..+-+.+.+- ...|+.+.+. +-.. ....++.
T Consensus 12 ~P~V~IimGS--~SD~~v~~~a~~~l~~~gi~~ev~V~sa------HR~p~~l~~~----------~~~a---~~~g~~V 70 (173)
T 4grd_A 12 APLVGVLMGS--SSDWDVMKHAVAILQEFGVPYEAKVVSA------HRMPDEMFDY----------AEKA---RERGLRA 70 (173)
T ss_dssp SCSEEEEESS--GGGHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHH----------HHHH---TTTTCSE
T ss_pred CCeEEEEeCc--HhHHHHHHHHHHHHHHcCCCEEEEEEcc------ccCHHHHHHH----------HHHH---HhcCCeE
Confidence 4678888887 4456667888889999998876665443 2345443221 1110 1122333
Q ss_pred eeeccCcc----hhhHhhhcCCceeecccccch---hhhHHHHHh-hhcceeeecC-CCCCCcCHhHHHHHHHHHhCcHH
Q 012083 366 YLTHCGWN----STMEGISMGVPFLCWPWGHDH---LYIKSCICD-DWKIGLWLEP-DDNGIIGRHEIKRKVDELLSNDV 436 (471)
Q Consensus 366 ~ItHgG~~----s~~eal~~GvP~l~~P~~~DQ---~~na~~v~~-~~G~G~~~~~-~~~~~~~~~~l~~~i~~ll~~~~ 436 (471)
+|.=.|.- ++.-+ ..-+|+|.+|..... .+--.-+.+ --|+.+..-. ...+..+..-++..| --+.|++
T Consensus 71 iIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~~I-La~~d~~ 148 (173)
T 4grd_A 71 IIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAVSI-LSGNSVD 148 (173)
T ss_dssp EEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHH-HTTSCHH
T ss_pred EEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHHHH-HcCCCHH
Confidence 66554432 34433 447899999974322 111111111 0144333211 000112222233333 3467899
Q ss_pred HHHHHHHHHHHHHHHhh
Q 012083 437 VRKNALKLKELAQKSVT 453 (471)
Q Consensus 437 ~~~~a~~l~~~~~~~~~ 453 (471)
+++|.+.++++.++.+.
T Consensus 149 l~~kl~~~r~~~~~~v~ 165 (173)
T 4grd_A 149 YANRLAAFRVRQNEAAH 165 (173)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999998887654
No 265
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=36.84 E-value=1.5e+02 Score=26.09 Aligned_cols=35 Identities=20% Similarity=0.232 Sum_probs=24.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
-|+++++.++.| --.++|+.|+++|++|.++....
T Consensus 9 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~~ 43 (285)
T 3sc4_A 9 GKTMFISGGSRG---IGLAIAKRVAADGANVALVAKSA 43 (285)
T ss_dssp TCEEEEESCSSH---HHHHHHHHHHTTTCEEEEEESCC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECCh
Confidence 356666655543 23578999999999999886643
No 266
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=36.47 E-value=2.5e+02 Score=26.14 Aligned_cols=20 Identities=20% Similarity=0.024 Sum_probs=14.4
Q ss_pred HHHHHHHhCC-CeEEEEeCCc
Q 012083 36 KLAHRLADCR-IKVTFVTTEF 55 (471)
Q Consensus 36 ~La~~L~~rG-h~Vt~~~~~~ 55 (471)
.|++.|.+.| .+|.+++.+.
T Consensus 23 ~l~~~l~~~g~~~~livtd~~ 43 (387)
T 3bfj_A 23 VVGERCQLLGGKKALLVTDKG 43 (387)
T ss_dssp GHHHHHHHTTCSEEEEECCTT
T ss_pred HHHHHHHHcCCCEEEEEECcc
Confidence 4566677667 7888888764
No 267
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=36.30 E-value=53 Score=28.05 Aligned_cols=37 Identities=14% Similarity=0.214 Sum_probs=27.0
Q ss_pred cEEEEEcCCCccc----HHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGH----VASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH----~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
.+|.+++....+. ..-...|++.|+++|+.|+.-...
T Consensus 14 ~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~ 54 (215)
T 2a33_A 14 RRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGS 54 (215)
T ss_dssp SEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred CeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCCh
Confidence 5799996665542 345678899999999998765554
No 268
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=36.29 E-value=62 Score=23.97 Aligned_cols=34 Identities=6% Similarity=0.149 Sum_probs=23.0
Q ss_pred CCeeEEEECCCcc--hHHHHHHH-----cCCceEEEeCchH
Q 012083 126 EKITCVIADVTFG--WALQVAAK-----LELKKASIYTSAP 159 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~-----lgiP~v~~~~~~~ 159 (471)
.+||+||.|.... .+..+++. .++|.+.++....
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (126)
T 1dbw_A 46 VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGD 86 (126)
T ss_dssp CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 7899999997654 34444433 3688888876543
No 269
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=36.09 E-value=45 Score=24.92 Aligned_cols=36 Identities=17% Similarity=0.194 Sum_probs=29.2
Q ss_pred cEEEEEcCCCcccHHHHH-HHHHHHHhCCCe-EEEEeC
Q 012083 18 VHVLLVSFPAQGHVASLM-KLAHRLADCRIK-VTFVTT 53 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~-~La~~L~~rGh~-Vt~~~~ 53 (471)
+||+++|..+.|+-.-+. .|-+.+.++|.+ +.+-..
T Consensus 19 ~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~ 56 (110)
T 3czc_A 19 VKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASC 56 (110)
T ss_dssp EEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 789999999999888877 777888889987 654433
No 270
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=36.00 E-value=26 Score=31.59 Aligned_cols=27 Identities=4% Similarity=-0.029 Sum_probs=22.8
Q ss_pred ceeeeeccCcchhhHhhhc----CCceeecc
Q 012083 363 VACYLTHCGWNSTMEGISM----GVPFLCWP 389 (471)
Q Consensus 363 ~~~~ItHgG~~s~~eal~~----GvP~l~~P 389 (471)
++++|+=||-||+.+++.. ++|++.++
T Consensus 64 ~D~vi~~GGDGT~l~a~~~~~~~~~P~lGI~ 94 (292)
T 2an1_A 64 ADLAVVVGGDGNMLGAARTLARYDINVIGIN 94 (292)
T ss_dssp CSEEEECSCHHHHHHHHHHHTTSSCEEEEBC
T ss_pred CCEEEEEcCcHHHHHHHHHhhcCCCCEEEEE
Confidence 4459999999999999753 78998887
No 271
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=35.91 E-value=66 Score=24.12 Aligned_cols=36 Identities=8% Similarity=0.076 Sum_probs=29.3
Q ss_pred CcEEEEEcCCCcccHHH-HHHHHHHHHhCCCeEEEEe
Q 012083 17 NVHVLLVSFPAQGHVAS-LMKLAHRLADCRIKVTFVT 52 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p-~~~La~~L~~rGh~Vt~~~ 52 (471)
++||+++|..+.|+-.- ...|-+.+.+.|.++.+-.
T Consensus 21 ~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp SEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 37999999999999875 6778888889999865443
No 272
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=35.80 E-value=28 Score=32.78 Aligned_cols=37 Identities=19% Similarity=0.240 Sum_probs=28.0
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|.+++++|+++-.+-.| +.+|..|+++|++|+++--.
T Consensus 1 M~~~~~~V~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~~ 37 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISG-----LTAALMLRDAGVDVDVYERS 37 (397)
T ss_dssp -CCCCSEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCCCCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEecC
Confidence 34456799999876554 67788899999999998543
No 273
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=35.80 E-value=28 Score=29.33 Aligned_cols=34 Identities=12% Similarity=0.204 Sum_probs=24.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
|||+++ |+.|.+- ..|+++|.++||+|+.++-..
T Consensus 1 MkvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGII--GATGRAG--SRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcCc
Confidence 477655 4445443 578899999999999987653
No 274
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=35.77 E-value=53 Score=28.27 Aligned_cols=30 Identities=17% Similarity=0.016 Sum_probs=23.6
Q ss_pred CCeeEEEECCCcch-------HHHHHHHcCCceEEEe
Q 012083 126 EKITCVIADVTFGW-------ALQVAAKLELKKASIY 155 (471)
Q Consensus 126 ~~pD~vV~D~~~~~-------~~~~A~~lgiP~v~~~ 155 (471)
.+||+|++|..... |..+...+++|+|.+.
T Consensus 102 ~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 102 TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 58999999987663 3456677799999975
No 275
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=35.69 E-value=2.5e+02 Score=26.41 Aligned_cols=20 Identities=20% Similarity=0.237 Sum_probs=14.3
Q ss_pred HHHHHHHhCC-CeEEEEeCCc
Q 012083 36 KLAHRLADCR-IKVTFVTTEF 55 (471)
Q Consensus 36 ~La~~L~~rG-h~Vt~~~~~~ 55 (471)
.|++.|.+.| .+|.+++...
T Consensus 33 ~l~~~l~~~g~~r~liVtd~~ 53 (407)
T 1vlj_A 33 KIGEEIKNAGIRKVLFLYGGG 53 (407)
T ss_dssp GHHHHHHHTTCCEEEEEECSS
T ss_pred HHHHHHHHcCCCeEEEEECch
Confidence 4566677777 7899998743
No 276
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=35.43 E-value=1.6e+02 Score=26.12 Aligned_cols=35 Identities=17% Similarity=0.069 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
+-|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 27 ~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 27 EGKVAFITGAARG---QGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEecc
Confidence 4567777766654 3467899999999999987643
No 277
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=35.33 E-value=14 Score=36.09 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
.|||+++..|-.|. .||+.|.+.||+|+++-..
T Consensus 3 ~M~iiI~G~G~vG~-----~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVGG-----TLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CEEEEEECCSHHHH-----HHHHHTCSTTEEEEEEESC
T ss_pred cCEEEEECCCHHHH-----HHHHHHHHCCCCEEEEECC
Confidence 47999998876663 5899999999999998664
No 278
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=35.32 E-value=2.1e+02 Score=25.13 Aligned_cols=34 Identities=18% Similarity=0.061 Sum_probs=24.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
-|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 8 gk~vlVTGas~G---IG~aia~~la~~G~~V~~~~r~ 41 (280)
T 3tox_A 8 GKIAIVTGASSG---IGRAAALLFAREGAKVVVTARN 41 (280)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEECCSC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEECC
Confidence 467777766543 2357899999999998876543
No 279
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=35.21 E-value=2.5e+02 Score=25.16 Aligned_cols=102 Identities=12% Similarity=0.095 Sum_probs=57.5
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCC--cchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTE--FICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED 92 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 92 (471)
++||+++..+. || -+.+|..+-... ..+|..+.+. .....+++. |+.+..+|....
T Consensus 95 ~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~--------------gIp~~~~~~~~~--- 154 (292)
T 3lou_A 95 RPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQH--------------GLPFRHFPITAD--- 154 (292)
T ss_dssp CCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHT--------------TCCEEECCCCSS---
T ss_pred CCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHc--------------CCCEEEeCCCcC---
Confidence 57998887655 54 455666655443 3677765543 233344444 888887764310
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCc-chHHHHHHHcCCceEEEeC
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTF-GWALQVAAKLELKKASIYT 156 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~-~~~~~~A~~lgiP~v~~~~ 156 (471)
+- ....+.+.+.+++ .+||+||.-.+. .-...+.+.+.-.++=+++
T Consensus 155 ---~r--------~~~~~~~~~~l~~-------~~~Dlivla~y~~il~~~~l~~~~~~~iNiHp 201 (292)
T 3lou_A 155 ---TK--------AQQEAQWLDVFET-------SGAELVILARYMQVLSPEASARLANRAINIHH 201 (292)
T ss_dssp ---CH--------HHHHHHHHHHHHH-------HTCSEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred ---CH--------HHHHHHHHHHHHH-------hCCCEEEecCchhhCCHHHHhhhcCCeEEeCC
Confidence 10 0112233344454 799999987654 3445555666666666654
No 280
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=34.93 E-value=2.3e+02 Score=24.66 Aligned_cols=39 Identities=18% Similarity=0.258 Sum_probs=29.5
Q ss_pred cHHHHHHHHHHhcccCCCCeeEEEECCCcc---hHHHHHHHcCCceEE
Q 012083 109 PGYLEELIQKINQQEEDEKITCVIADVTFG---WALQVAAKLELKKAS 153 (471)
Q Consensus 109 ~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~---~~~~~A~~lgiP~v~ 153 (471)
.+..+.+++.+++ -.+++.|.... -+..+|..+|||++.
T Consensus 114 ~~~m~~vm~~l~~------~gL~fvDS~Ts~~S~a~~~A~~~gvp~~~ 155 (245)
T 2nly_A 114 EKIMRAILEVVKE------KNAFIIDSGTSPHSLIPQLAEELEVPYAT 155 (245)
T ss_dssp HHHHHHHHHHHHH------TTCEEEECCCCSSCSHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHH------CCCEEEcCCCCcccHHHHHHHHcCCCeEE
Confidence 4456677776654 34888998753 678899999999998
No 281
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=34.91 E-value=68 Score=26.88 Aligned_cols=138 Identities=10% Similarity=0.028 Sum_probs=72.5
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEec-----cchhhhhccC
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKW-----APQEKVLAHP 361 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~-----vpq~~lL~~~ 361 (471)
.+++.-.|+..... ...+++.|.+.++.+-+.+... ....+.....+...++++.--| +.+-.+...+
T Consensus 10 ~IllgvTGs~aa~k---~~~l~~~L~~~g~~V~vv~T~~----A~~fi~~~~~~~l~~~v~~~~~~~~~~~~hi~l~~~a 82 (194)
T 1p3y_1 10 KLLIGICGSISSVG---ISSYLLYFKSFFKEIRVVMTKT----AEDLIPAHTVSYFCDHVYSEHGENGKRHSHVEIGRWA 82 (194)
T ss_dssp EEEEEECSCGGGGG---THHHHHHHTTTSSEEEEEECHH----HHHHSCHHHHGGGSSEEECTTCSSSCCCCHHHHHHHC
T ss_pred EEEEEEECHHHHHH---HHHHHHHHHHCCCEEEEEEchh----HHHHHHHHHHHHhcCCEeccccccCCCcCcccccccC
Confidence 46666667654332 2345555555566655444322 1112222222334455221122 2233333334
Q ss_pred cceeeeeccCcchhhHh-------------hhcCCceeeccccc----ch---hhhHHHHHhhhcceeeecCCCC-----
Q 012083 362 SVACYLTHCGWNSTMEG-------------ISMGVPFLCWPWGH----DH---LYIKSCICDDWKIGLWLEPDDN----- 416 (471)
Q Consensus 362 ~~~~~ItHgG~~s~~ea-------------l~~GvP~l~~P~~~----DQ---~~na~~v~~~~G~G~~~~~~~~----- 416 (471)
++ .+|.-|-.||+.-. +..++|+++.|-.. .. ..|-.++.+ +|+=+ +++...
T Consensus 83 D~-~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~i-v~p~~g~~f~l 159 (194)
T 1p3y_1 83 DI-YCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRK-DGHIV-IEPVEIMAFEI 159 (194)
T ss_dssp SE-EEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHH-HTCEE-CCCBCCC----
T ss_pred CE-EEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHH-CCCEE-ECCCCCccccc
Confidence 42 47777777765432 56789999999521 21 447788888 68733 333211
Q ss_pred ---------CCcCHhHHHHHHHHHhCc
Q 012083 417 ---------GIIGRHEIKRKVDELLSN 434 (471)
Q Consensus 417 ---------~~~~~~~l~~~i~~ll~~ 434 (471)
...+.++|.+.+.+.+.+
T Consensus 160 acg~~g~~g~~~~~~~iv~~v~~~l~~ 186 (194)
T 1p3y_1 160 ATGTRKPNRGLITPDKALLAIEKGFKE 186 (194)
T ss_dssp --------CBCCCHHHHHHHHHHHCC-
T ss_pred ccCCcCcCCCCCCHHHHHHHHHHHhcc
Confidence 224678899888888864
No 282
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=34.77 E-value=21 Score=33.35 Aligned_cols=31 Identities=19% Similarity=0.099 Sum_probs=25.9
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
||+|+..|..|. .+|..|.++||+|+++...
T Consensus 17 kI~iIG~G~mG~-----~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGT-----ALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHH-----HHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHH-----HHHHHHHhCCCEEEEEECC
Confidence 999998876664 5789999999999998664
No 283
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=34.75 E-value=1.8e+02 Score=25.74 Aligned_cols=30 Identities=13% Similarity=-0.065 Sum_probs=18.5
Q ss_pred CCeeEEEECCCcchHHHHHHHcCCceEEEe
Q 012083 126 EKITCVIADVTFGWALQVAAKLELKKASIY 155 (471)
Q Consensus 126 ~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~ 155 (471)
.++|.||.-.............++|+|.+.
T Consensus 68 ~~vDgII~~~~~~~~~~~~~~~~iPvV~~~ 97 (302)
T 2qh8_A 68 ENPDVLVGIATPTAQALVSATKTIPIVFTA 97 (302)
T ss_dssp TCCSEEEEESHHHHHHHHHHCSSSCEEEEE
T ss_pred CCCCEEEECChHHHHHHHhcCCCcCEEEEe
Confidence 799999975432111122235789999875
No 284
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=34.72 E-value=30 Score=30.93 Aligned_cols=32 Identities=16% Similarity=0.165 Sum_probs=26.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|||.|+-.|..|. .+|+.|+++||+|++....
T Consensus 2 ~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGG-----PMAANLVRAGFDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHHTCCEEEECSS
T ss_pred CeEEEEccCHHHH-----HHHHHHHHCCCeEEEEcCC
Confidence 7999998887774 5688899999999988654
No 285
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=34.68 E-value=45 Score=28.47 Aligned_cols=38 Identities=18% Similarity=0.182 Sum_probs=29.9
Q ss_pred cEEEEEc--CCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVS--FPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~--~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
+|++.+. -++-|=..-...||..|+++|++|.++-...
T Consensus 2 ~~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred ceEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 4554443 3567889999999999999999999986654
No 286
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=34.58 E-value=45 Score=29.87 Aligned_cols=39 Identities=21% Similarity=0.337 Sum_probs=29.6
Q ss_pred CCCcEEEEEcCCCcccHHH--HHHHHHHHHhCC-CeEEEEeCC
Q 012083 15 KTNVHVLLVSFPAQGHVAS--LMKLAHRLADCR-IKVTFVTTE 54 (471)
Q Consensus 15 ~~~~~Il~~~~~~~GH~~p--~~~La~~L~~rG-h~Vt~~~~~ 54 (471)
.++.|||++. +..+|-.+ ...|++.|.+.| ++|++...+
T Consensus 2 ~~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 4678999995 44588544 357788888888 999999874
No 287
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=34.30 E-value=31 Score=31.52 Aligned_cols=31 Identities=26% Similarity=0.204 Sum_probs=25.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
|||+|+..|..|. .+|..|.++||+|+++..
T Consensus 1 m~I~iiG~G~mG~-----~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGS-----ALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEEc
Confidence 4899987766663 568889999999999876
No 288
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=34.30 E-value=47 Score=29.88 Aligned_cols=38 Identities=8% Similarity=-0.027 Sum_probs=30.8
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
+.|+|..-|+-|=..-.+.||..|+++|++|.++=...
T Consensus 42 ~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 42 KVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred eEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 44566666677899999999999999999999985543
No 289
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=34.24 E-value=2e+02 Score=25.63 Aligned_cols=102 Identities=13% Similarity=0.117 Sum_probs=55.0
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCc---chhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEF---ICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE 91 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 91 (471)
++||+++..+. || -+.+|.++-.+. ..+|..+.+.. ..+.++ ..|+.+..+|....
T Consensus 89 ~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~--------------~~gIp~~~~~~~~~-- 149 (288)
T 3obi_A 89 RRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFD--------------FGDIPFYHFPVNKD-- 149 (288)
T ss_dssp CEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTT--------------TTTCCEEECCCCTT--
T ss_pred CcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHH--------------HcCCCEEEeCCCcc--
Confidence 58998887665 44 345555555433 24666555422 222222 23888887754310
Q ss_pred CCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCc-chHHHHHHHcCCceEEEeC
Q 012083 92 DDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTF-GWALQVAAKLELKKASIYT 156 (471)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~-~~~~~~A~~lgiP~v~~~~ 156 (471)
+- ....+.+.+.+++ .+||+||.-.+. .-...+.+.+.-.++=+++
T Consensus 150 ----~r--------~~~~~~~~~~l~~-------~~~Dlivlagy~~il~~~~l~~~~~~~iNiHp 196 (288)
T 3obi_A 150 ----TR--------RQQEAAITALIAQ-------THTDLVVLARYMQILSDEMSARLAGRCINIHH 196 (288)
T ss_dssp ----TH--------HHHHHHHHHHHHH-------HTCCEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred ----cH--------HHHHHHHHHHHHh-------cCCCEEEhhhhhhhCCHHHHhhhcCCeEEeCc
Confidence 00 1112223344444 799999987654 3445555666666666654
No 290
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=34.22 E-value=52 Score=32.91 Aligned_cols=46 Identities=13% Similarity=0.051 Sum_probs=39.7
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhH
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIK 61 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~ 61 (471)
++.||++.+.++-.|-....-++..|..+|++|..++.....+.+.
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv 142 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKIL 142 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHHH
Confidence 3579999999999999999999999999999999988776555443
No 291
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=34.09 E-value=56 Score=24.78 Aligned_cols=32 Identities=6% Similarity=0.117 Sum_probs=22.1
Q ss_pred CCeeEEEECCCcc--hHHHHHHHc-------CCceEEEeCc
Q 012083 126 EKITCVIADVTFG--WALQVAAKL-------ELKKASIYTS 157 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~l-------giP~v~~~~~ 157 (471)
.+||+||.|.... .+..+++.+ .+|.+.++..
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 46 TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 7899999998765 344444433 5788887654
No 292
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=34.04 E-value=41 Score=27.23 Aligned_cols=40 Identities=15% Similarity=0.167 Sum_probs=29.9
Q ss_pred CcEEEEEcCCCc---ccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 17 NVHVLLVSFPAQ---GHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 17 ~~~Il~~~~~~~---GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
..+|+++|.=+. ---.+...|++.|.++|.+|.|+.+|-.
T Consensus 23 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPVA 65 (180)
T 1pno_A 23 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVA 65 (180)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 357888874321 1345788999999999999999998643
No 293
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=34.03 E-value=54 Score=27.12 Aligned_cols=38 Identities=13% Similarity=0.241 Sum_probs=27.9
Q ss_pred cEEEEEcCCCcccHHHHH-HHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLM-KLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~-~La~~L~~rGh~Vt~~~~~~ 55 (471)
|||+++-....|+..-+. .+++.|.+.|++|.++.-..
T Consensus 6 ~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 44 (200)
T 2a5l_A 6 PYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPA 44 (200)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCCC
T ss_pred ceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhhh
Confidence 688887777778776655 45677777899998876543
No 294
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=33.92 E-value=1.6e+02 Score=26.83 Aligned_cols=109 Identities=14% Similarity=0.125 Sum_probs=56.0
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCccee
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLELA-GQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVAC 365 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~ 365 (471)
.+.+|.+|.++. .++.++.+. +..++.+.... ......+.++.. + .-+-...+++..+++++
T Consensus 6 rvgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~------~~~~~~~a~~~g--~--~~~~~~~~~l~~~~~D~ 68 (344)
T 3euw_A 6 RIALFGAGRIGH-------VHAANIAANPDLELVVIADPF------IEGAQRLAEANG--A--EAVASPDEVFARDDIDG 68 (344)
T ss_dssp EEEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSS------HHHHHHHHHTTT--C--EEESSHHHHTTCSCCCE
T ss_pred EEEEECCcHHHH-------HHHHHHHhCCCcEEEEEECCC------HHHHHHHHHHcC--C--ceeCCHHHHhcCCCCCE
Confidence 377888887543 345555554 44544444432 000011111111 2 23345667887667776
Q ss_pred eeeccCcc----hhhHhhhcCCceee-cccc--cchhhhHHHHHhhhcceeeec
Q 012083 366 YLTHCGWN----STMEGISMGVPFLC-WPWG--HDHLYIKSCICDDWKIGLWLE 412 (471)
Q Consensus 366 ~ItHgG~~----s~~eal~~GvP~l~-~P~~--~DQ~~na~~v~~~~G~G~~~~ 412 (471)
++----.. -+.+++.+|+++++ -|+. .++-.....++++.|+-+.+.
T Consensus 69 V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 122 (344)
T 3euw_A 69 IVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLG 122 (344)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEEC
T ss_pred EEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEec
Confidence 77544433 36778999999876 3543 333333333333246655554
No 295
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=33.85 E-value=27 Score=32.63 Aligned_cols=39 Identities=10% Similarity=0.122 Sum_probs=29.7
Q ss_pred CCcEEEEEcCCCcccHHHH----HHHHHHHHhCCCeEEEEeCC
Q 012083 16 TNVHVLLVSFPAQGHVASL----MKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~----~~La~~L~~rGh~Vt~~~~~ 54 (471)
+||||+++..|..+--.-. ..++++|.+.||+|+.+...
T Consensus 2 ~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~ 44 (364)
T 3i12_A 2 AKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGID 44 (364)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 5689999887766644443 48889999999999988653
No 296
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=33.74 E-value=36 Score=30.64 Aligned_cols=45 Identities=7% Similarity=0.056 Sum_probs=32.3
Q ss_pred CcEEEEEcCCCccc----HHHHHHHHHHHHhCCCeEEEEeCCcchhhhH
Q 012083 17 NVHVLLVSFPAQGH----VASLMKLAHRLADCRIKVTFVTTEFICERIK 61 (471)
Q Consensus 17 ~~~Il~~~~~~~GH----~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~ 61 (471)
+|||+++..+..+- ..-...++++|.++||+|..+........+.
T Consensus 3 ~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~ 51 (307)
T 3r5x_A 3 AMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMDLIE 51 (307)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSSGGGHHH
T ss_pred CcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccCchhHHH
Confidence 47999998664432 3345688999999999999988765544443
No 297
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=33.66 E-value=70 Score=26.08 Aligned_cols=38 Identities=13% Similarity=0.027 Sum_probs=31.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
..|.|....+.|=..-+..|++.|.++|++|.++....
T Consensus 5 ~~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~ 42 (169)
T 1xjc_A 5 NVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 42 (169)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeCC
Confidence 45667777788998999999999999999999887654
No 298
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=33.64 E-value=52 Score=27.16 Aligned_cols=38 Identities=16% Similarity=0.258 Sum_probs=27.9
Q ss_pred cEEEEEcCCCcccHHHHH-HHHHHHHh-CCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLM-KLAHRLAD-CRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~-~La~~L~~-rGh~Vt~~~~~~ 55 (471)
|||+++-....|+..-+. .+++.|.+ .|++|.++--..
T Consensus 2 mkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l~~ 41 (198)
T 3b6i_A 2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPE 41 (198)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEECCC
T ss_pred CeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEccc
Confidence 788888777778877655 45677777 899998875543
No 299
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=33.63 E-value=51 Score=27.17 Aligned_cols=38 Identities=13% Similarity=0.100 Sum_probs=29.0
Q ss_pred cEEEEEcCCCcccHHHHH-HHHHHHHh-CCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLM-KLAHRLAD-CRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~-~La~~L~~-rGh~Vt~~~~~~ 55 (471)
|||+++-....|+..-+. .+++.|.+ .|++|.++....
T Consensus 5 ~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~ 44 (188)
T 2ark_A 5 GKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDE 44 (188)
T ss_dssp EEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTT
T ss_pred CEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhhh
Confidence 799888877778876655 46777777 899999886554
No 300
>3c01_A Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=33.59 E-value=80 Score=19.66 Aligned_cols=31 Identities=19% Similarity=0.245 Sum_probs=27.3
Q ss_pred CHhHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Q 012083 420 GRHEIKRKVDELLSNDVVRKNALKLKELAQK 450 (471)
Q Consensus 420 ~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 450 (471)
|.+++.+...+--.||.+|.+-++++..+..
T Consensus 2 skqEvK~E~Ke~EGdP~iK~~~R~~~~e~a~ 32 (48)
T 3c01_A 2 DKEEVKREMKEQEGNPEVKSKRREVHMEILS 32 (48)
T ss_pred CHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 6678889999999999999999999988865
No 301
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=33.54 E-value=42 Score=27.27 Aligned_cols=39 Identities=13% Similarity=0.071 Sum_probs=29.5
Q ss_pred cEEEEEcCCCc---ccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 18 VHVLLVSFPAQ---GHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 18 ~~Il~~~~~~~---GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
.+|+++|.=+. ---.+...|++.|.++|.+|.|+.+|-.
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPVA 64 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPVA 64 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 57888874321 1345788999999999999999998643
No 302
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=33.51 E-value=1.5e+02 Score=25.95 Aligned_cols=34 Identities=21% Similarity=0.087 Sum_probs=26.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
=|+++++.++.| =-.++|+.|++.|.+|.++...
T Consensus 7 gKvalVTGas~G---IG~aiA~~la~~Ga~Vv~~~~~ 40 (254)
T 4fn4_A 7 NKVVIVTGAGSG---IGRAIAKKFALNDSIVVAVELL 40 (254)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEECC
Confidence 378888877775 3467899999999999887654
No 303
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=33.46 E-value=2.1e+02 Score=24.67 Aligned_cols=32 Identities=25% Similarity=0.187 Sum_probs=23.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVT 52 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~ 52 (471)
.|+++++.++.| + -.++|+.|+++|++|.+..
T Consensus 4 ~k~vlVTGas~g-I--G~aia~~l~~~G~~vv~~~ 35 (258)
T 3oid_A 4 NKCALVTGSSRG-V--GKAAAIRLAENGYNIVINY 35 (258)
T ss_dssp CCEEEESSCSSH-H--HHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEecCCch-H--HHHHHHHHHHCCCEEEEEc
Confidence 467777755543 2 3578999999999999863
No 304
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=33.23 E-value=48 Score=30.24 Aligned_cols=46 Identities=15% Similarity=0.088 Sum_probs=31.4
Q ss_pred ccccCCCCcEEEEE-cCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 10 SESLNKTNVHVLLV-SFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 10 ~~~m~~~~~~Il~~-~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
+..|...+.||+-+ -=|+-|=.+-.+.||.+|++.|++|.++=.+.
T Consensus 40 ~~~~~i~~aKVIAIaGKGGVGKTTtavNLA~aLA~~GkkVllID~Dp 86 (314)
T 3fwy_A 40 DEADKITGAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 86 (314)
T ss_dssp -------CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CcccCCCCceEEEEECCCccCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 33444445666444 44677899999999999999999999986554
No 305
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=33.18 E-value=1.5e+02 Score=28.34 Aligned_cols=32 Identities=25% Similarity=0.333 Sum_probs=23.2
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHh-CCCeEEEEeC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLAD-CRIKVTFVTT 53 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~-rGh~Vt~~~~ 53 (471)
+|||+++..++ ...++++.|++ .|++++++.+
T Consensus 24 ~~~IlIlG~g~-----r~~al~~~~a~~~g~~~v~~~~ 56 (452)
T 2qk4_A 24 AARVLIIGSGG-----REHTLAWKLAQSHHVKQVLVAP 56 (452)
T ss_dssp SEEEEEEECSH-----HHHHHHHHHTTCTTEEEEEEEE
T ss_pred CcEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEEC
Confidence 57999998763 35677888865 4888776654
No 306
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=33.16 E-value=2e+02 Score=26.58 Aligned_cols=33 Identities=15% Similarity=0.110 Sum_probs=25.1
Q ss_pred CCeeEEEECCCcc---hHHHHHHHcCCceEEEeCch
Q 012083 126 EKITCVIADVTFG---WALQVAAKLELKKASIYTSA 158 (471)
Q Consensus 126 ~~pD~vV~D~~~~---~~~~~A~~lgiP~v~~~~~~ 158 (471)
.++|+||.=.-.. .+-.+|...++|+|.+.|+.
T Consensus 86 ~~~D~IIavGGGs~iD~aK~iA~~~~~p~i~IPTTa 121 (353)
T 3hl0_A 86 AGADCVVSLGGGSTTGLGKAIALRTDAAQIVIPTTY 121 (353)
T ss_dssp TTCSEEEEEESHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred cCCCEEEEeCCcHHHHHHHHHHhccCCCEEEEeCCc
Confidence 7899998654322 45567788999999998875
No 307
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=33.13 E-value=61 Score=24.97 Aligned_cols=32 Identities=13% Similarity=0.122 Sum_probs=22.0
Q ss_pred cEEEEEcCCCcccHH--------HHHHHHHHHHhCCCeEE
Q 012083 18 VHVLLVSFPAQGHVA--------SLMKLAHRLADCRIKVT 49 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~--------p~~~La~~L~~rGh~Vt 49 (471)
||.++++.|-.|... -+-..|..|.++||.+.
T Consensus 8 M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 8 MRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp CCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 577788888777632 33455666889999665
No 308
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=32.98 E-value=30 Score=30.37 Aligned_cols=30 Identities=23% Similarity=0.306 Sum_probs=23.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVT 52 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~ 52 (471)
|||.|+-.|..|. .+|+.|.+.||+|++..
T Consensus 1 M~I~iIG~G~mG~-----~la~~l~~~g~~V~~~~ 30 (264)
T 1i36_A 1 LRVGFIGFGEVAQ-----TLASRLRSRGVEVVTSL 30 (264)
T ss_dssp CEEEEESCSHHHH-----HHHHHHHHTTCEEEECC
T ss_pred CeEEEEechHHHH-----HHHHHHHHCCCeEEEeC
Confidence 4899997666664 57899999999999853
No 309
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=32.90 E-value=58 Score=25.36 Aligned_cols=33 Identities=9% Similarity=0.017 Sum_probs=22.4
Q ss_pred CCeeEEEECCCcc--hHHHHHHH-------cCCceEEEeCch
Q 012083 126 EKITCVIADVTFG--WALQVAAK-------LELKKASIYTSA 158 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~-------lgiP~v~~~~~~ 158 (471)
.+||+||.|.... .+..+++. .++|+|.++...
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 50 TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC
Confidence 7899999997654 34444432 368888887543
No 310
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=32.77 E-value=1.3e+02 Score=26.39 Aligned_cols=34 Identities=21% Similarity=0.112 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
+-|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 14 ~gk~~lVTGas~g---IG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 14 QGRVAFITGAARG---QGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEec
Confidence 3467777766543 235789999999999998764
No 311
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=32.61 E-value=2e+02 Score=23.34 Aligned_cols=143 Identities=11% Similarity=0.160 Sum_probs=76.1
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceee
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACY 366 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ 366 (471)
|.|-|-+|| ..+....++....|+..+..+-+.+.+- ...|+.+.+. +-.. ....++++
T Consensus 7 ~~V~IimgS--~SD~~v~~~a~~~l~~~gi~~ev~V~Sa------HR~p~~~~~~----------~~~a---~~~g~~Vi 65 (169)
T 3trh_A 7 IFVAILMGS--DSDLSTMETAFTELKSLGIPFEAHILSA------HRTPKETVEF----------VENA---DNRGCAVF 65 (169)
T ss_dssp CEEEEEESC--GGGHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHH----------HHHH---HHTTEEEE
T ss_pred CcEEEEECc--HHhHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHHHH----------HHHH---HhCCCcEE
Confidence 356666776 4456667788889999998876666433 2344442211 1110 11223448
Q ss_pred eeccCcc----hhhHhhhcCCceeecccccchh-hhH--HHHHh-hhcceee-ecCCCCCCcCHhHHHHHHHHHhCcHHH
Q 012083 367 LTHCGWN----STMEGISMGVPFLCWPWGHDHL-YIK--SCICD-DWKIGLW-LEPDDNGIIGRHEIKRKVDELLSNDVV 437 (471)
Q Consensus 367 ItHgG~~----s~~eal~~GvP~l~~P~~~DQ~-~na--~~v~~-~~G~G~~-~~~~~~~~~~~~~l~~~i~~ll~~~~~ 437 (471)
|.=+|.. ++..+ ..-+|+|.+|...-.. ... .-+.+ .-|+.+. +..++.+.++..-+...| --+.|+++
T Consensus 66 Ia~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~I-l~~~d~~l 143 (169)
T 3trh_A 66 IAAAGLAAHLAGTIAA-HTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQI-IALQDKSI 143 (169)
T ss_dssp EEEECSSCCHHHHHHH-TCSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHH-HHTTCHHH
T ss_pred EEECChhhhhHHHHHh-cCCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHHHHHH-HcCCCHHH
Confidence 8777744 33333 3358999999853211 111 11121 0155322 222100122333333333 34578899
Q ss_pred HHHHHHHHHHHHHHh
Q 012083 438 RKNALKLKELAQKSV 452 (471)
Q Consensus 438 ~~~a~~l~~~~~~~~ 452 (471)
+++.+.++++.++.+
T Consensus 144 ~~kl~~~r~~~~~~v 158 (169)
T 3trh_A 144 AQKLVQQRTAKRETL 158 (169)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999888764
No 312
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=32.47 E-value=2.1e+02 Score=24.61 Aligned_cols=34 Identities=18% Similarity=0.193 Sum_probs=24.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
.|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 6 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 39 (257)
T 3imf_A 6 EKVVIITGGSSG---MGKGMATRFAKEGARVVITGRT 39 (257)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356677765543 3467899999999999887654
No 313
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=32.37 E-value=40 Score=31.59 Aligned_cols=38 Identities=16% Similarity=0.065 Sum_probs=28.1
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
|..++|||+++..+ . -...+++++++.||+|..+....
T Consensus 7 m~~~~~~ili~g~g---~--~~~~~~~a~~~~G~~v~~~~~~~ 44 (391)
T 1kjq_A 7 LRPAATRVMLLGSG---E--LGKEVAIECQRLGVEVIAVDRYA 44 (391)
T ss_dssp TSTTCCEEEEESCS---H--HHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCCCCEEEEECCC---H--HHHHHHHHHHHcCCEEEEEECCC
Confidence 44456899999543 2 34678999999999998886654
No 314
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=32.31 E-value=49 Score=29.45 Aligned_cols=37 Identities=19% Similarity=0.181 Sum_probs=30.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
+.|.|..-|+-|=..-.+.||..|+++|++|.++=..
T Consensus 3 kvIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 3 RQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred eEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 4566666678899999999999999999999988443
No 315
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=32.17 E-value=57 Score=27.90 Aligned_cols=37 Identities=11% Similarity=0.208 Sum_probs=27.0
Q ss_pred cEEEEEcCCCcc----cHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQG----HVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~G----H~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
.+|.+++....+ +..-...|++.|+++|+.|..-+..
T Consensus 10 ~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~ 50 (216)
T 1ydh_A 10 RKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGS 50 (216)
T ss_dssp SEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred CeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 469888655443 4456788999999999988666554
No 316
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=31.99 E-value=37 Score=31.01 Aligned_cols=35 Identities=11% Similarity=0.145 Sum_probs=26.6
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCC----CeEEEEeCCc
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCR----IKVTFVTTEF 55 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rG----h~Vt~~~~~~ 55 (471)
++|||.|+-.|..|. .+|..|.+.| |+|++.....
T Consensus 21 ~~mkI~iIG~G~mG~-----ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 21 QSMSVGFIGAGQLAF-----ALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp -CCCEEEESCSHHHH-----HHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCCEEEEECCCHHHH-----HHHHHHHHCCCCCcceEEEECCCc
Confidence 458999998776654 5688899999 9999886543
No 317
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=31.89 E-value=41 Score=29.33 Aligned_cols=30 Identities=17% Similarity=-0.083 Sum_probs=23.8
Q ss_pred CCeeEEEECCCcch-------HHHHHHHcCCceEEEe
Q 012083 126 EKITCVIADVTFGW-------ALQVAAKLELKKASIY 155 (471)
Q Consensus 126 ~~pD~vV~D~~~~~-------~~~~A~~lgiP~v~~~ 155 (471)
.+||+|++|..... |..+.-.+++|+|.+.
T Consensus 108 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 144 (246)
T 3ga2_A 108 TEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIA 144 (246)
T ss_dssp SCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred CCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeee
Confidence 58999999987552 4567788899999974
No 318
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=31.71 E-value=40 Score=30.18 Aligned_cols=32 Identities=9% Similarity=0.215 Sum_probs=25.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|||+|+-.|..|. .+++.|.+.||+|+++...
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEeCC
Confidence 7999998777774 4678888999999877543
No 319
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=31.60 E-value=47 Score=29.42 Aligned_cols=31 Identities=26% Similarity=0.246 Sum_probs=26.0
Q ss_pred CCeeEEEECCCcc------hHHHHHHHcCCceEEEeC
Q 012083 126 EKITCVIADVTFG------WALQVAAKLELKKASIYT 156 (471)
Q Consensus 126 ~~pD~vV~D~~~~------~~~~~A~~lgiP~v~~~~ 156 (471)
.+||+|++..... -+..+|+.||+|++....
T Consensus 111 ~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 111 EAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred cCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 6899999887663 578899999999998764
No 320
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=31.54 E-value=47 Score=27.54 Aligned_cols=37 Identities=11% Similarity=0.240 Sum_probs=27.5
Q ss_pred cEEEEEcCCCcccHHHHH-HHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLM-KLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~-~La~~L~~rGh~Vt~~~~~~ 55 (471)
|||+++-.. .|+..-+. .+++.|.+.|++|.++--..
T Consensus 5 mkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 42 (199)
T 2zki_A 5 PNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVRE 42 (199)
T ss_dssp CEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred cEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehhH
Confidence 799888877 88876655 35666777899998875543
No 321
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=31.52 E-value=2.6e+02 Score=24.32 Aligned_cols=34 Identities=21% Similarity=0.149 Sum_probs=24.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
-|+++++.++.| --.++|++|+++|++|.++...
T Consensus 26 gk~~lVTGas~g---IG~aia~~la~~G~~V~~~~r~ 59 (271)
T 4ibo_A 26 GRTALVTGSSRG---LGRAMAEGLAVAGARILINGTD 59 (271)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEECCSC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 466777755543 2357899999999998876543
No 322
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=31.46 E-value=89 Score=25.52 Aligned_cols=48 Identities=17% Similarity=0.170 Sum_probs=34.5
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCC--CeEEEEeCCcchhhhH
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLADCR--IKVTFVTTEFICERIK 61 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rG--h~Vt~~~~~~~~~~~~ 61 (471)
|-..+.+|.+++ ++.+++--+-..++.|.+-| |+|.+++....-+.+.
T Consensus 8 ~~~m~~~V~Iim-GS~SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR~p~~~~ 57 (174)
T 3kuu_A 8 AYAAGVKIAIVM-GSKSDWATMQFAADVLTTLNVPFHVEVVSAHRTPDRLF 57 (174)
T ss_dssp SSCCCCCEEEEE-SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHH
T ss_pred cccCCCcEEEEE-CcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHH
Confidence 333345788777 88999999999999999887 6666666555444443
No 323
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=31.44 E-value=84 Score=22.64 Aligned_cols=32 Identities=22% Similarity=0.203 Sum_probs=21.4
Q ss_pred CCeeEEEECCCcc--hHHHHHHH-----cCCceEEEeCc
Q 012083 126 EKITCVIADVTFG--WALQVAAK-----LELKKASIYTS 157 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~-----lgiP~v~~~~~ 157 (471)
.+||+|+.|.... .+..+++. -.+|.+.++..
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 44 GNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 7899999998654 34444332 25788887654
No 324
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=31.44 E-value=85 Score=25.71 Aligned_cols=34 Identities=12% Similarity=0.162 Sum_probs=24.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
|+|+++ |+.|-+ -..++++|.++||+|+.++...
T Consensus 4 ~~ilVt--GatG~i--G~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIF--GATGQT--GLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEE--cCCcHH--HHHHHHHHHHCCCeEEEEEeCh
Confidence 677765 444433 3578899999999999987643
No 325
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=31.32 E-value=97 Score=26.39 Aligned_cols=44 Identities=18% Similarity=0.035 Sum_probs=29.3
Q ss_pred EEEeccchh-hhhccCcceeeeeccCcchhhHhhh---------cCCceeeccc
Q 012083 347 KMVKWAPQE-KVLAHPSVACYLTHCGWNSTMEGIS---------MGVPFLCWPW 390 (471)
Q Consensus 347 ~~~~~vpq~-~lL~~~~~~~~ItHgG~~s~~eal~---------~GvP~l~~P~ 390 (471)
.++...+.. .++..-+-..++--||.||.-|... +++|++.+-.
T Consensus 94 ~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 94 RAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 345555643 4444334456788999999988752 4899998864
No 326
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=31.22 E-value=44 Score=29.94 Aligned_cols=32 Identities=16% Similarity=0.220 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
+|||+|+..|..|. .+++.|.+.||+|+++..
T Consensus 4 ~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 47999998777775 457888899999987654
No 327
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=31.13 E-value=80 Score=23.49 Aligned_cols=32 Identities=9% Similarity=0.063 Sum_probs=21.3
Q ss_pred CCeeEEEECCCcc--hHHHHHH---H----cCCceEEEeCc
Q 012083 126 EKITCVIADVTFG--WALQVAA---K----LELKKASIYTS 157 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~---~----lgiP~v~~~~~ 157 (471)
.+||+||.|.... .+..+++ . -++|++.++..
T Consensus 46 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 46 HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 7899999997654 3333332 2 26888887754
No 328
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=31.12 E-value=2.2e+02 Score=23.36 Aligned_cols=145 Identities=12% Similarity=0.084 Sum_probs=77.0
Q ss_pred CcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCccee
Q 012083 286 GSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVAC 365 (471)
Q Consensus 286 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~ 365 (471)
+|.|-|-+|| ..+-...++..+.|++.+..+-+.+-+- ...|+.+.+.. -. .....++.
T Consensus 22 kp~V~IimGS--~SD~~v~~~a~~~L~~~gI~~e~~V~SA------HRtp~~l~~~~----------~~---a~~~g~~V 80 (181)
T 4b4k_A 22 KSLVGVIMGS--TSDWETMKYACDILDELNIPYEKKVVSA------HRTPDYMFEYA----------ET---ARERGLKV 80 (181)
T ss_dssp CCSEEEEESS--GGGHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHHH----------HH---TTTTTCCE
T ss_pred CccEEEEECC--HhHHHHHHHHHHHHHHcCCCeeEEEEcc------ccChHHHHHHH----------HH---HHhcCceE
Confidence 4578888898 4455668889999999998876666433 23444332111 11 01122334
Q ss_pred eeeccCcc----hhhHhhhcCCceeecccccc---hhhhHHHHHhhh--cceeee-cCCCCCCcCHhHHHHHHHHHhCcH
Q 012083 366 YLTHCGWN----STMEGISMGVPFLCWPWGHD---HLYIKSCICDDW--KIGLWL-EPDDNGIIGRHEIKRKVDELLSND 435 (471)
Q Consensus 366 ~ItHgG~~----s~~eal~~GvP~l~~P~~~D---Q~~na~~v~~~~--G~G~~~-~~~~~~~~~~~~l~~~i~~ll~~~ 435 (471)
+|.=.|.- ++..+ ..-+|+|.+|.... -.+.-.-+.+ . |+.+.- .....+..+..-++..| --+.|+
T Consensus 81 iIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga~NAallA~qI-La~~d~ 157 (181)
T 4b4k_A 81 IIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQI-LGSFHD 157 (181)
T ss_dssp EEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHHHHHHHHHHHH-HTTTCH
T ss_pred EEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccHHHHHHHHHHH-HccCCH
Confidence 66655533 33333 45689999998542 2222222332 2 333322 11000001122222222 235688
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 012083 436 VVRKNALKLKELAQKSVTK 454 (471)
Q Consensus 436 ~~~~~a~~l~~~~~~~~~~ 454 (471)
+++++.+.+++..++.+.+
T Consensus 158 ~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 158 DIHDALELRREAIEKDVRE 176 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999988888876544
No 329
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=31.11 E-value=30 Score=32.35 Aligned_cols=34 Identities=9% Similarity=0.204 Sum_probs=26.5
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
+.|||.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 21 ~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 21 QSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 45899999766555 46789999999999987553
No 330
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=31.10 E-value=35 Score=30.96 Aligned_cols=34 Identities=15% Similarity=0.158 Sum_probs=26.4
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
..|||.|+-.|..|. .+|+.|.+.||+|+++...
T Consensus 29 ~~~~I~iIG~G~mG~-----~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGS-----GIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp CSSCEEEECCSHHHH-----HHHHHHHHTTCCEEEECSS
T ss_pred CCCeEEEEcccHHHH-----HHHHHHHhCCCEEEEEeCC
Confidence 358999998776664 4788899999999887553
No 331
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=31.10 E-value=1.4e+02 Score=27.29 Aligned_cols=127 Identities=10% Similarity=0.013 Sum_probs=0.0
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcce
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLELA--GQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVA 364 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~ 364 (471)
.+.+|.+|.++. .++.++.+. +..++.+.... ..-.++..+..-+..+-...++|..++++
T Consensus 15 rvgiiG~G~~g~-------~~~~~l~~~~~~~~lvav~d~~----------~~~~~~~~~~~~~~~~~~~~~ll~~~~~D 77 (354)
T 3q2i_A 15 RFALVGCGRIAN-------NHFGALEKHADRAELIDVCDID----------PAALKAAVERTGARGHASLTDMLAQTDAD 77 (354)
T ss_dssp EEEEECCSTTHH-------HHHHHHHHTTTTEEEEEEECSS----------HHHHHHHHHHHCCEEESCHHHHHHHCCCS
T ss_pred eEEEEcCcHHHH-------HHHHHHHhCCCCeEEEEEEcCC----------HHHHHHHHHHcCCceeCCHHHHhcCCCCC
Q ss_pred eeeeccCcch----hhHhhhcCCceee---cccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCc
Q 012083 365 CYLTHCGWNS----TMEGISMGVPFLC---WPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSN 434 (471)
Q Consensus 365 ~~ItHgG~~s----~~eal~~GvP~l~---~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 434 (471)
+++----... +.+++.+|+++++ +-...++-.....++++.|+-+.+. ....-....+.+++++.+
T Consensus 78 ~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~----~~~r~~p~~~~~k~~i~~ 150 (354)
T 3q2i_A 78 IVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVV----KQNRRNATLQLLKRAMQE 150 (354)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEEC----CGGGGSHHHHHHHHHHHT
T ss_pred EEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEE----EcccCCHHHHHHHHHHhc
No 332
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=31.04 E-value=32 Score=31.00 Aligned_cols=33 Identities=15% Similarity=0.216 Sum_probs=27.3
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
+|||.|+-.+..|. .+|+.|+++||+|+++...
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 47999998887774 6789999999999988543
No 333
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=30.96 E-value=68 Score=23.84 Aligned_cols=34 Identities=12% Similarity=0.055 Sum_probs=21.0
Q ss_pred CCeeEEEECCCcc--hHHHHHHH-----cCCceEEEeCchH
Q 012083 126 EKITCVIADVTFG--WALQVAAK-----LELKKASIYTSAP 159 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~-----lgiP~v~~~~~~~ 159 (471)
.+||+||.|.... .+..+.+. -.+|++.++....
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~ 90 (130)
T 3eod_A 50 FTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATEN 90 (130)
T ss_dssp CCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCC
Confidence 7899999997654 23333322 3588888876543
No 334
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=30.96 E-value=2.8e+02 Score=24.95 Aligned_cols=41 Identities=20% Similarity=0.242 Sum_probs=34.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICE 58 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~ 58 (471)
..|+++..++.|=..-+..||..|...|.+|.++..+.++.
T Consensus 105 ~vi~ivG~~GsGKTTl~~~LA~~l~~~g~kV~lv~~D~~r~ 145 (306)
T 1vma_A 105 FVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRA 145 (306)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH
T ss_pred eEEEEEcCCCChHHHHHHHHHHHHHhcCCEEEEEccccccH
Confidence 45677778889999999999999999999999998776543
No 335
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=30.85 E-value=39 Score=28.40 Aligned_cols=32 Identities=25% Similarity=0.238 Sum_probs=23.6
Q ss_pred cEEEEEc-CCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVS-FPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~-~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|||+++- .+..| ..+++.|.++||+|+++...
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 4888885 44434 35788999999999987653
No 336
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=30.83 E-value=79 Score=24.34 Aligned_cols=43 Identities=30% Similarity=0.299 Sum_probs=27.5
Q ss_pred HHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHH-----cCCceEEEeCchH
Q 012083 113 EELIQKINQQEEDEKITCVIADVTFG--WALQVAAK-----LELKKASIYTSAP 159 (471)
Q Consensus 113 ~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~-----lgiP~v~~~~~~~ 159 (471)
.+.++.+.. .+||+||.|.... .+..+++. -++|+|.++...-
T Consensus 56 ~~al~~l~~----~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 105 (150)
T 4e7p_A 56 QEAIQLLEK----ESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKR 105 (150)
T ss_dssp HHHHHHHTT----SCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred HHHHHHhhc----cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 445555554 7899999998654 34444432 3688888876543
No 337
>3bzy_A ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3bzl_A 3bzv_A 3bzx_A 3bzo_A 3bzz_A 3c03_B 3c00_A
Probab=30.80 E-value=95 Score=19.85 Aligned_cols=34 Identities=18% Similarity=0.292 Sum_probs=30.5
Q ss_pred CCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Q 012083 417 GIIGRHEIKRKVDELLSNDVVRKNALKLKELAQK 450 (471)
Q Consensus 417 ~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 450 (471)
-..|.+++.+...+--.||.+|.+-++++..+..
T Consensus 5 lkMskqEvK~E~Ke~EGdP~iK~r~R~~~re~a~ 38 (54)
T 3bzy_A 5 ASMSKDEVKREAKDTDGNPEIKGERRRLHSEIQS 38 (54)
T ss_pred cCCCHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999988865
No 338
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=30.78 E-value=63 Score=26.12 Aligned_cols=43 Identities=14% Similarity=0.124 Sum_probs=33.0
Q ss_pred EEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHh
Q 012083 21 LLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKES 63 (471)
Q Consensus 21 l~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~ 63 (471)
+++..+..--..+.+-+|..-+..|++|+++.+..-...+.+.
T Consensus 9 II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~K~ 51 (160)
T 3pnx_A 9 LLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLRDP 51 (160)
T ss_dssp EEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGBCG
T ss_pred EEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhccC
Confidence 3334456667888889999999999999999887776666544
No 339
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=30.74 E-value=49 Score=27.48 Aligned_cols=40 Identities=15% Similarity=0.167 Sum_probs=29.8
Q ss_pred CcEEEEEcCCCc---ccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 17 NVHVLLVSFPAQ---GHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 17 ~~~Il~~~~~~~---GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
..+|+|+|.-+. ---.+...|++.|.++|.+|.|+.+|-.
T Consensus 46 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVA 88 (203)
T 2fsv_C 46 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVA 88 (203)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEecccc
Confidence 357888874321 1345778999999999999999998643
No 340
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=30.69 E-value=71 Score=24.73 Aligned_cols=34 Identities=15% Similarity=0.157 Sum_probs=22.8
Q ss_pred CCeeEEEECCCcc--hHHHHHHH-----cCCceEEEeCchH
Q 012083 126 EKITCVIADVTFG--WALQVAAK-----LELKKASIYTSAP 159 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~-----lgiP~v~~~~~~~ 159 (471)
.+||+||.|.... .+..+++. -.+|+|.++....
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 50 TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYAD 90 (154)
T ss_dssp SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGG
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 7899999997654 34333332 2688888876544
No 341
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=30.62 E-value=29 Score=32.03 Aligned_cols=38 Identities=13% Similarity=0.050 Sum_probs=27.2
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCC-eEEEEeCCc
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRI-KVTFVTTEF 55 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh-~Vt~~~~~~ 55 (471)
|..++|||.++..|..|.. +|..|+..|| +|+++-...
T Consensus 5 ~~~~~~kI~VIGaG~vG~~-----lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 5 LVQRRKKVAMIGSGMIGGT-----MGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCSCCCEEEEECCSHHHHH-----HHHHHHHHTCCEEEEECSSS
T ss_pred cCCCCCEEEEECCCHHHHH-----HHHHHHhCCCCeEEEEECCh
Confidence 5455689999975444433 8888999999 988876543
No 342
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=30.57 E-value=2.6e+02 Score=25.26 Aligned_cols=41 Identities=24% Similarity=0.293 Sum_probs=34.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICE 58 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~ 58 (471)
.-|+++..++.|=..-+..||..|+..|.+|.++..+.+..
T Consensus 106 ~vI~ivG~~G~GKTT~~~~LA~~l~~~g~kVllid~D~~r~ 146 (320)
T 1zu4_A 106 NIFMLVGVNGTGKTTSLAKMANYYAELGYKVLIAAADTFRA 146 (320)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCCSCH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 45677777788999999999999999999999998876544
No 343
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=30.53 E-value=38 Score=31.01 Aligned_cols=39 Identities=15% Similarity=0.054 Sum_probs=27.4
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
|.++.|+|++. |+.|.+- ..|++.|.++||+|+.+.-..
T Consensus 21 ~~~~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 59 (351)
T 3ruf_A 21 LIFSPKTWLIT--GVAGFIG--SNLLEKLLKLNQVVIGLDNFS 59 (351)
T ss_dssp HHHSCCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCCeEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEeCCC
Confidence 33345787765 4455443 478899999999999987643
No 344
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=30.52 E-value=1.6e+02 Score=26.65 Aligned_cols=128 Identities=12% Similarity=0.022 Sum_probs=0.0
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHh-CCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCccee
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLEL-AGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVAC 365 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~-~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~ 365 (471)
.+.+|.+|.++. .++.++.+ .+..++.+.... ++...+-........-+-...+++..+++++
T Consensus 7 ~igiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~---------~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~ 70 (330)
T 3e9m_A 7 RYGIMSTAQIVP-------RFVAGLRESAQAEVRGIASRR---------LENAQKMAKELAIPVAYGSYEELCKDETIDI 70 (330)
T ss_dssp EEEECSCCTTHH-------HHHHHHHHSSSEEEEEEBCSS---------SHHHHHHHHHTTCCCCBSSHHHHHHCTTCSE
T ss_pred EEEEECchHHHH-------HHHHHHHhCCCcEEEEEEeCC---------HHHHHHHHHHcCCCceeCCHHHHhcCCCCCE
Q ss_pred eeeccCcch----hhHhhhcCCceee---cccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCc
Q 012083 366 YLTHCGWNS----TMEGISMGVPFLC---WPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSN 434 (471)
Q Consensus 366 ~ItHgG~~s----~~eal~~GvP~l~---~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 434 (471)
++----... +.+++.+|+++++ +-...++-.....++++.|+-+.+. ....-.-..+.+++++.+
T Consensus 71 V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~----~~~r~~p~~~~~k~~i~~ 142 (330)
T 3e9m_A 71 IYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEA----QKSVFLPITQKVKATIQE 142 (330)
T ss_dssp EEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEEC----CSGGGCHHHHHHHHHHHT
T ss_pred EEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE----EhhhhCHHHHHHHHHHhC
No 345
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=30.51 E-value=1.9e+02 Score=22.40 Aligned_cols=36 Identities=14% Similarity=0.018 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCc-ccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 17 NVHVLLVSFPAQ-GHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 17 ~~~Il~~~~~~~-GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
+.+|+++-.... |.+ -..+++.|.+.|++|.-+.+.
T Consensus 14 p~~IavIGaS~~~g~~--G~~~~~~L~~~G~~V~~vnp~ 50 (138)
T 1y81_A 14 FRKIALVGASKNPAKY--GNIILKDLLSKGFEVLPVNPN 50 (138)
T ss_dssp CCEEEEETCCSCTTSH--HHHHHHHHHHTTCEEEEECTT
T ss_pred CCeEEEEeecCCCCCH--HHHHHHHHHHCCCEEEEeCCC
Confidence 578999876322 332 236778899999997766554
No 346
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=30.49 E-value=61 Score=27.87 Aligned_cols=34 Identities=15% Similarity=0.073 Sum_probs=27.4
Q ss_pred cEEEEEcCC--CcccHHHHHHHHHHHHhCCCeEEEE
Q 012083 18 VHVLLVSFP--AQGHVASLMKLAHRLADCRIKVTFV 51 (471)
Q Consensus 18 ~~Il~~~~~--~~GH~~p~~~La~~L~~rGh~Vt~~ 51 (471)
||.+|++.. .-|=..-...|++.|+++|++|.+.
T Consensus 4 mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~ 39 (228)
T 3of5_A 4 MKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCL 39 (228)
T ss_dssp CEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEe
Confidence 465555543 5588899999999999999999986
No 347
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=30.42 E-value=1e+02 Score=26.58 Aligned_cols=37 Identities=22% Similarity=0.228 Sum_probs=23.5
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCe-EEEEeCCc
Q 012083 15 KTNVHVLLVSFPAQGHVASLMKLAHRLADCRIK-VTFVTTEF 55 (471)
Q Consensus 15 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~-Vt~~~~~~ 55 (471)
.+.+++++. ++.|- --.+++++|+++|++ |.++....
T Consensus 3 l~~k~vlVt--Gas~g--IG~~~a~~l~~~G~~~v~~~~r~~ 40 (254)
T 1sby_A 3 LTNKNVIFV--AALGG--IGLDTSRELVKRNLKNFVILDRVE 40 (254)
T ss_dssp CTTCEEEEE--TTTSH--HHHHHHHHHHHTCCSEEEEEESSC
T ss_pred CCCcEEEEE--CCCCh--HHHHHHHHHHHCCCcEEEEEecCc
Confidence 344455544 33342 346789999999997 77776543
No 348
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=30.42 E-value=1.1e+02 Score=25.37 Aligned_cols=38 Identities=5% Similarity=0.045 Sum_probs=29.4
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
.+||+|+.+++..- .-+....+.|.+.|++|++++...
T Consensus 23 ~~kV~ill~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 23 SKKIAVLITDEFED-SEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp CCEEEEECCTTBCT-HHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEEECCCCCH-HHHHHHHHHHHHCCCEEEEEECCC
Confidence 47999998876553 345567788888999999998754
No 349
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=30.37 E-value=77 Score=24.92 Aligned_cols=44 Identities=14% Similarity=0.053 Sum_probs=33.5
Q ss_pred EEEE-EcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHH
Q 012083 19 HVLL-VSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKE 62 (471)
Q Consensus 19 ~Il~-~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~ 62 (471)
|++| +..+..-.+.+.+.+|...++.|++|+++.+..-...+.+
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTBH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHhc
Confidence 4433 4445567788899999999999999999998777665554
No 350
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=30.36 E-value=69 Score=26.85 Aligned_cols=38 Identities=13% Similarity=0.169 Sum_probs=28.1
Q ss_pred cEEEEEcCCCcccHHHHH-HHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLM-KLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~-~La~~L~~rGh~Vt~~~~~~ 55 (471)
|||+++-....|+..-+. .+++.|.+.|++|.++--..
T Consensus 7 mkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 45 (211)
T 1ydg_A 7 VKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVRE 45 (211)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEeccc
Confidence 799888777788776655 45677777899998875543
No 351
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=30.35 E-value=52 Score=28.34 Aligned_cols=30 Identities=7% Similarity=0.063 Sum_probs=25.3
Q ss_pred cceeeeeccCcchhhHhhhcCCceeeccccc
Q 012083 362 SVACYLTHCGWNSTMEGISMGVPFLCWPWGH 392 (471)
Q Consensus 362 ~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 392 (471)
.++++|+.||.......- .++|+|-++..+
T Consensus 63 ~~dVIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 63 RCDAIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeEEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 355699999999999975 689999999865
No 352
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=30.33 E-value=75 Score=28.55 Aligned_cols=33 Identities=12% Similarity=0.264 Sum_probs=25.3
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 012083 15 KTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVT 52 (471)
Q Consensus 15 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~ 52 (471)
+++|||+++... .....+.+.|.+.||+|.+..
T Consensus 5 ~~~mki~v~~~~-----~~~~~~~~~L~~~g~~v~~~~ 37 (300)
T 2rir_A 5 LTGLKIAVIGGD-----ARQLEIIRKLTEQQADIYLVG 37 (300)
T ss_dssp CCSCEEEEESBC-----HHHHHHHHHHHHTTCEEEEES
T ss_pred ccCCEEEEECCC-----HHHHHHHHHHHhCCCEEEEEe
Confidence 467899888542 355677899999999998764
No 353
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=30.33 E-value=1.6e+02 Score=25.79 Aligned_cols=33 Identities=24% Similarity=0.171 Sum_probs=26.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
=|+++++.++.| =-.++|+.|++.|.+|.+...
T Consensus 9 gKvalVTGas~G---IG~aia~~la~~Ga~Vvi~~~ 41 (255)
T 4g81_D 9 GKTALVTGSARG---LGFAYAEGLAAAGARVILNDI 41 (255)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEECCS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 478899887776 346789999999999987654
No 354
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=30.30 E-value=44 Score=29.82 Aligned_cols=32 Identities=16% Similarity=0.186 Sum_probs=25.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|||.|+-.|..| ..+|+.|+++||+|++....
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 599999776655 46789999999999987554
No 355
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=30.23 E-value=89 Score=27.04 Aligned_cols=38 Identities=21% Similarity=0.211 Sum_probs=28.5
Q ss_pred cEEEEEcCCCc----------c-cHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQ----------G-HVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~----------G-H~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
+||+++..... | ...=+....+.|.+.|++|++++...
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 58988886422 2 44567777888999999999998754
No 356
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=30.19 E-value=78 Score=23.87 Aligned_cols=43 Identities=9% Similarity=0.219 Sum_probs=0.0
Q ss_pred HHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHc-------CCceEEEeCch
Q 012083 112 LEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKL-------ELKKASIYTSA 158 (471)
Q Consensus 112 ~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 158 (471)
..+.++.+.. .+||+||.|.... .+..+++.+ ++|++.++...
T Consensus 39 ~~~a~~~l~~----~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 90 (140)
T 3grc_A 39 AAQALEQVAR----RPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANA 90 (140)
T ss_dssp HHHHHHHHHH----SCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTH
T ss_pred HHHHHHHHHh----CCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCC
No 357
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=30.18 E-value=50 Score=27.49 Aligned_cols=40 Identities=13% Similarity=0.062 Sum_probs=29.9
Q ss_pred CcEEEEEcCCCc---ccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 17 NVHVLLVSFPAQ---GHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 17 ~~~Il~~~~~~~---GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
..+|+|+|.-+. ---.+...|++.|.++|.+|.|+.+|-.
T Consensus 45 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVA 87 (207)
T 1djl_A 45 ANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPVA 87 (207)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCccC
Confidence 357888874321 1345678999999999999999998643
No 358
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=29.95 E-value=22 Score=31.18 Aligned_cols=33 Identities=18% Similarity=0.348 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCC----CeEEEEeC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCR----IKVTFVTT 53 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rG----h~Vt~~~~ 53 (471)
++|||.|+-.|..|. .+|+.|.++| |+|+++..
T Consensus 3 ~~m~i~iiG~G~mG~-----~~a~~l~~~g~~~~~~v~~~~~ 39 (262)
T 2rcy_A 3 ENIKLGFMGLGQMGS-----ALAHGIANANIIKKENLFYYGP 39 (262)
T ss_dssp SSSCEEEECCSHHHH-----HHHHHHHHHTSSCGGGEEEECS
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHHCCCCCCCeEEEEeC
Confidence 458999998776664 3678888889 89988754
No 359
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=29.88 E-value=43 Score=29.09 Aligned_cols=34 Identities=24% Similarity=0.278 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
..+||.|+-.|..| .++|+.|+++||+|++....
T Consensus 18 ~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 18 QGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 45899999766555 45789999999999987654
No 360
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=29.69 E-value=1.3e+02 Score=28.28 Aligned_cols=96 Identities=15% Similarity=0.032 Sum_probs=51.1
Q ss_pred HHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccHHHHHHHHHhhccHHHHHH
Q 012083 36 KLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEEL 115 (471)
Q Consensus 36 ~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 115 (471)
.|.+.+.+.|.+|.+++.+...+...+.....+ .. ++.+ .+ +....+ .. . +.+++.
T Consensus 43 ~l~~~l~~~g~r~liVtd~~~~~~~~~~v~~~L------~~-g~~~-~~-~~~~~~-p~---~-----------~~v~~~ 98 (387)
T 3uhj_A 43 KLAAYLAPLGKRALVLIDRVLFDALSERIGKSC------GD-SLDI-RF-ERFGGE-CC---T-----------SEIERV 98 (387)
T ss_dssp TTHHHHGGGCSEEEEEECTTTHHHHHHHC-------------CCEE-EE-EECCSS-CS---H-----------HHHHHH
T ss_pred HHHHHHHHcCCEEEEEECchHHHHHHHHHHHHH------Hc-CCCe-EE-EEcCCC-CC---H-----------HHHHHH
Confidence 456667777888999988766544322211111 11 4443 11 111111 11 1 112233
Q ss_pred HHHHhcccCCCCeeEEEECCCcc---hHHHHHHHcCCceEEEeCchH
Q 012083 116 IQKINQQEEDEKITCVIADVTFG---WALQVAAKLELKKASIYTSAP 159 (471)
Q Consensus 116 l~~l~~~~~~~~pD~vV~D~~~~---~~~~~A~~lgiP~v~~~~~~~ 159 (471)
++.+++ .++|+||.=.-.. .+-.+|...++|+|.+.|+..
T Consensus 99 ~~~~~~----~~~d~IIavGGGs~~D~AK~iA~~~~~p~i~IPTTag 141 (387)
T 3uhj_A 99 RKVAIE----HGSDILVGVGGGKTADTAKIVAIDTGARIVIAPTIAS 141 (387)
T ss_dssp HHHHHH----HTCSEEEEESSHHHHHHHHHHHHHTTCEEEECCSSCC
T ss_pred HHHHhh----cCCCEEEEeCCcHHHHHHHHHHHhcCCCEEEecCccc
Confidence 333333 6899999654433 556677889999999877643
No 361
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=29.66 E-value=2.2e+02 Score=22.94 Aligned_cols=142 Identities=11% Similarity=0.078 Sum_probs=76.2
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceee
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACY 366 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ 366 (471)
+.|-|-+|| ..+....++....|+..+..+-+.+.+- ...|+.+.+.. -. .....++.+
T Consensus 4 ~~V~Iimgs--~SD~~v~~~a~~~l~~~gi~~ev~V~Sa------HR~p~~~~~~~----------~~---a~~~g~~Vi 62 (163)
T 3ors_A 4 MKVAVIMGS--SSDWKIMQESCNMLDYFEIPYEKQVVSA------HRTPKMMVQFA----------SE---ARERGINII 62 (163)
T ss_dssp CCEEEEESC--GGGHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHHH----------HH---TTTTTCCEE
T ss_pred CeEEEEECc--HHHHHHHHHHHHHHHHcCCCEEEEEECC------cCCHHHHHHHH----------HH---HHhCCCcEE
Confidence 355666676 3456667788889999998876655433 23444432111 00 011223347
Q ss_pred eeccCcc----hhhHhhhcCCceeecccccch------hhhHHHHHhhhcceeee-cCCCCCCcCHhHHHHHHHHHhCcH
Q 012083 367 LTHCGWN----STMEGISMGVPFLCWPWGHDH------LYIKSCICDDWKIGLWL-EPDDNGIIGRHEIKRKVDELLSND 435 (471)
Q Consensus 367 ItHgG~~----s~~eal~~GvP~l~~P~~~DQ------~~na~~v~~~~G~G~~~-~~~~~~~~~~~~l~~~i~~ll~~~ 435 (471)
|.=+|.. ++..++ .-+|+|.+|....- ..-.-+ .- -|+.+.. ..++.+.++..-++..| --+.|+
T Consensus 63 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vq-mp-~GvPVatV~I~~a~~~nAa~lAa~I-l~~~d~ 138 (163)
T 3ors_A 63 IAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQ-MP-GGIPVATTAIGAAGAKNAGILAARM-LSIQNP 138 (163)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CC-TTSCCEECCSTHHHHHHHHHHHHHH-HHTTCT
T ss_pred EEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhh-CC-CCCceEEEEcCCcccHHHHHHHHHH-HhCCCH
Confidence 7766643 344443 56899999975431 111111 12 1553222 11000123333444444 345688
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 012083 436 VVRKNALKLKELAQKSVT 453 (471)
Q Consensus 436 ~~~~~a~~l~~~~~~~~~ 453 (471)
+++++.+.+++.+++.+.
T Consensus 139 ~l~~kl~~~r~~~~~~v~ 156 (163)
T 3ors_A 139 SLVEKLNQYESSLIQKVE 156 (163)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999998887643
No 362
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=29.64 E-value=43 Score=28.64 Aligned_cols=36 Identities=11% Similarity=0.029 Sum_probs=26.1
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
..+++.+|..|+..-...++..|.++|++|..+-.+
T Consensus 13 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 48 (267)
T 3sty_A 13 KHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLG 48 (267)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccc
Confidence 444445566666666778999999999998876544
No 363
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=29.63 E-value=1.2e+02 Score=28.96 Aligned_cols=31 Identities=13% Similarity=0.235 Sum_probs=23.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
.||+++.. | .....+++++.+.|++|.++.+
T Consensus 3 k~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~ 33 (449)
T 2w70_A 3 DKIVIANR---G--EIALRILRACKELGIKTVAVHS 33 (449)
T ss_dssp SEEEECCC---H--HHHHHHHHHHHHHTCEEEEEEE
T ss_pred ceEEEeCC---c--HHHHHHHHHHHHcCCeEEEEec
Confidence 47777753 3 2456799999999999998765
No 364
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=29.57 E-value=49 Score=30.57 Aligned_cols=37 Identities=16% Similarity=0.107 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
++|+|+++ |+.|.+- ..|++.|.++||+|+.++-...
T Consensus 4 ~~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~~ 40 (352)
T 1xgk_A 4 QKKTIAVV--GATGRQG--ASLIRVAAAVGHHVRAQVHSLK 40 (352)
T ss_dssp CCCCEEEE--STTSHHH--HHHHHHHHHTTCCEEEEESCSC
T ss_pred CCCEEEEE--CCCCHHH--HHHHHHHHhCCCEEEEEECCCC
Confidence 34677665 4555443 4578899999999999876443
No 365
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=29.45 E-value=1.1e+02 Score=23.87 Aligned_cols=43 Identities=16% Similarity=0.094 Sum_probs=29.0
Q ss_pred cEEEEEc-CCCccc--HHHHHHHHHHHHhCCCeE-EEEeCCcchhhh
Q 012083 18 VHVLLVS-FPAQGH--VASLMKLAHRLADCRIKV-TFVTTEFICERI 60 (471)
Q Consensus 18 ~~Il~~~-~~~~GH--~~p~~~La~~L~~rGh~V-t~~~~~~~~~~~ 60 (471)
||++|+- .+-+|+ ..-.+.+|.++.+.||+| .++-..+.....
T Consensus 13 ~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DGV~~a 59 (140)
T 2d1p_A 13 MRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGVYNA 59 (140)
T ss_dssp CEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGG
T ss_pred eEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechHHHHH
Confidence 5775544 444554 444577899999999999 877776655444
No 366
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=29.44 E-value=67 Score=28.12 Aligned_cols=34 Identities=18% Similarity=0.039 Sum_probs=24.8
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
-|+++++.++.| --.++|++|+++|++|.++...
T Consensus 10 ~k~~lVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 43 (267)
T 3t4x_A 10 GKTALVTGSTAG---IGKAIATSLVAEGANVLINGRR 43 (267)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356777755543 2357899999999999988654
No 367
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=29.41 E-value=35 Score=28.78 Aligned_cols=34 Identities=15% Similarity=0.300 Sum_probs=24.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
|||++.. +.|-+- ..++++|.++||+|+.++-..
T Consensus 1 M~ilItG--atG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MKIFIVG--STGRVG--KSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CEEEEES--TTSHHH--HHHHHHHTTSSCEEEEEESSG
T ss_pred CeEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECCc
Confidence 4776653 444433 578999999999999987654
No 368
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=29.39 E-value=82 Score=23.83 Aligned_cols=33 Identities=30% Similarity=0.342 Sum_probs=21.7
Q ss_pred CCeeEEEECCCcc--hHHHHHHH-----cCCceEEEeCchH
Q 012083 126 EKITCVIADVTFG--WALQVAAK-----LELKKASIYTSAP 159 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~-----lgiP~v~~~~~~~ 159 (471)
.+||+||.|. .. .+..+.+. -++|++.++....
T Consensus 47 ~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~~ 86 (142)
T 2qxy_A 47 EKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYVD 86 (142)
T ss_dssp SCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCCC
T ss_pred cCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCCC
Confidence 7899999998 54 23333332 2589888876543
No 369
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=29.37 E-value=66 Score=23.44 Aligned_cols=34 Identities=15% Similarity=0.032 Sum_probs=22.8
Q ss_pred CCeeEEEECCCcc--hHHHHHHH-----cCCceEEEeCchH
Q 012083 126 EKITCVIADVTFG--WALQVAAK-----LELKKASIYTSAP 159 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~-----lgiP~v~~~~~~~ 159 (471)
.+||+|+.|.... .+..+++. -++|.+.++....
T Consensus 46 ~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (120)
T 1tmy_A 46 LKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQ 86 (120)
T ss_dssp HCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTC
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCCC
Confidence 6899999998765 34444433 3688888876543
No 370
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=29.35 E-value=62 Score=27.45 Aligned_cols=33 Identities=15% Similarity=0.177 Sum_probs=24.8
Q ss_pred CCeeEEEE-CCCcc-hHHHHHHHcCCceEEEeCch
Q 012083 126 EKITCVIA-DVTFG-WALQVAAKLELKKASIYTSA 158 (471)
Q Consensus 126 ~~pD~vV~-D~~~~-~~~~~A~~lgiP~v~~~~~~ 158 (471)
..||+||+ |...- .+..=|.++|||.|.+.-+.
T Consensus 114 ~~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDTn 148 (208)
T 1vi6_A 114 REPEVVFVNDPAIDKQAVSEATAVGIPVVALCDSN 148 (208)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCCEEEEECCCcchhHHHHHHHhCCCEEEEeCCC
Confidence 57888774 54333 67888999999999987653
No 371
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=29.32 E-value=2.6e+02 Score=25.75 Aligned_cols=41 Identities=10% Similarity=0.094 Sum_probs=34.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICE 58 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~ 58 (471)
.-+++...|+.|=..-++.++..++.+|..|.|+......+
T Consensus 64 ~ii~I~G~pGsGKTtLal~la~~~~~~g~~vlyid~E~s~~ 104 (356)
T 1u94_A 64 RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALD 104 (356)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCcc
Confidence 34677888899999999999999999999999998865433
No 372
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=29.27 E-value=55 Score=28.81 Aligned_cols=31 Identities=16% Similarity=0.090 Sum_probs=25.8
Q ss_pred CCeeEEEECCCcc------hHHHHHHHcCCceEEEeC
Q 012083 126 EKITCVIADVTFG------WALQVAAKLELKKASIYT 156 (471)
Q Consensus 126 ~~pD~vV~D~~~~------~~~~~A~~lgiP~v~~~~ 156 (471)
.+||+|++..... -+..+|+.||+|++....
T Consensus 115 ~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 115 EKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp HTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred cCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 5799999887663 578899999999998754
No 373
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=29.22 E-value=18 Score=32.66 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=26.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|||+|+..|+.|- .+|..|++.||+|+++...
T Consensus 3 mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 7999998887774 5788888899999998765
No 374
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=29.22 E-value=36 Score=31.63 Aligned_cols=37 Identities=5% Similarity=0.030 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCcc-c---HHHHHHHHHHHHhCCCeEEEEe
Q 012083 16 TNVHVLLVSFPAQG-H---VASLMKLAHRLADCRIKVTFVT 52 (471)
Q Consensus 16 ~~~~Il~~~~~~~G-H---~~p~~~La~~L~~rGh~Vt~~~ 52 (471)
+|+||+++..|..+ | +.-...++++|.+.||+|+.+.
T Consensus 2 ~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~ 42 (357)
T 4fu0_A 2 QNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIG 42 (357)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEE
Confidence 66799888655443 4 2334568899999999998774
No 375
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=29.22 E-value=40 Score=30.07 Aligned_cols=30 Identities=17% Similarity=0.244 Sum_probs=24.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVT 52 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~ 52 (471)
|||+|+-.|..|. .+|+.|.+.||+|+++.
T Consensus 4 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 7999998777775 46888999999998765
No 376
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=29.09 E-value=57 Score=27.42 Aligned_cols=34 Identities=15% Similarity=0.207 Sum_probs=23.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHH-hCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLA-DCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~-~rGh~Vt~~~~~ 54 (471)
||.++++ |+.|-+ -.++++.|. ++||+|+.+.-.
T Consensus 5 mk~vlVt-Gasg~i--G~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITIL-GAAGQI--AQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSEEEEE-STTSHH--HHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEEEE-eCCcHH--HHHHHHHHHhcCCceEEEEecC
Confidence 6644444 333433 357889999 899999988764
No 377
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=29.02 E-value=55 Score=27.90 Aligned_cols=34 Identities=15% Similarity=0.141 Sum_probs=25.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
+|.++++.++.| --.++|+.|+++|++|.++...
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 466777755543 2357899999999999887664
No 378
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=28.93 E-value=1e+02 Score=22.75 Aligned_cols=37 Identities=24% Similarity=0.364 Sum_probs=25.9
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
|.+++++|+++- .+-.-...+.+.|...|++|..+..
T Consensus 1 m~m~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 37 (132)
T 2rdm_A 1 MSLEAVTILLAD----DEAILLLDFESTLTDAGFLVTAVSS 37 (132)
T ss_dssp -CCSSCEEEEEC----SSHHHHHHHHHHHHHTTCEEEEESS
T ss_pred CCCCCceEEEEc----CcHHHHHHHHHHHHHcCCEEEEECC
Confidence 455678998885 3455566778888888999876543
No 379
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=28.86 E-value=69 Score=26.79 Aligned_cols=36 Identities=17% Similarity=0.119 Sum_probs=29.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
..++++.++..|+-.-+..+++.|+++|+.|...-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 467777778888888899999999999999887654
No 380
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=28.73 E-value=2.2e+02 Score=26.37 Aligned_cols=33 Identities=15% Similarity=0.083 Sum_probs=24.8
Q ss_pred CCeeEEEECCCcc---hHHHHHHHcCCceEEEeCch
Q 012083 126 EKITCVIADVTFG---WALQVAAKLELKKASIYTSA 158 (471)
Q Consensus 126 ~~pD~vV~D~~~~---~~~~~A~~lgiP~v~~~~~~ 158 (471)
.++|+||.=.-.. .+-.+|...++|+|.+.|+.
T Consensus 88 ~~~D~IIavGGGsviD~aK~iA~~~~~p~i~IPTT~ 123 (358)
T 3jzd_A 88 AGADCAVAVGGGSTTGLGKAIALETGMPIVAIPTTY 123 (358)
T ss_dssp HTCSEEEEEESHHHHHHHHHHHHHHCCCEEEEECSS
T ss_pred cCCCEEEEeCCcHHHHHHHHHHhccCCCEEEEeCCc
Confidence 6899999654322 45567788999999998874
No 381
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=28.71 E-value=3e+02 Score=24.54 Aligned_cols=106 Identities=12% Similarity=0.054 Sum_probs=56.9
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDR 94 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 94 (471)
++||+++..+. || .+.+|.++-... ..+|..+.+..... +.+. ....|+.+..+|...
T Consensus 88 ~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a-~~~~----------A~~~gIp~~~~~~~~------ 147 (287)
T 3nrb_A 88 RKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPRE-ALSV----------SLVGDIPFHYLPVTP------ 147 (287)
T ss_dssp CCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGG-GCCC----------CCCTTSCEEECCCCG------
T ss_pred CcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHH-HHHH----------HHHcCCCEEEEeccC------
Confidence 58998888665 43 445666655543 35777665433221 2111 222378887765421
Q ss_pred ccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHHHcCCceEEEeCc
Q 012083 95 KDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~~ 157 (471)
.+ .....+.+.+.+++ .+||+||.-.+.. -...+.+.+.-.++=++++
T Consensus 148 ~~--------r~~~~~~~~~~l~~-------~~~Dlivlagym~il~~~~l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 148 AT--------KAAQESQIKNIVTQ-------SQADLIVLARYMQILSDDLSAFLSGRCINIHHS 196 (287)
T ss_dssp GG--------HHHHHHHHHHHHHH-------HTCSEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred cc--------hhhHHHHHHHHHHH-------hCCCEEEhhhhhhhcCHHHHhhccCCeEEECcc
Confidence 00 01112233344444 7999999876543 4455556666667776653
No 382
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=28.60 E-value=55 Score=22.59 Aligned_cols=49 Identities=14% Similarity=0.132 Sum_probs=29.9
Q ss_pred cCCceeecccccchhhh-HHHHHhh-hcceeeecCCCCCCcCHhHHHHHHHHHhC
Q 012083 381 MGVPFLCWPWGHDHLYI-KSCICDD-WKIGLWLEPDDNGIIGRHEIKRKVDELLS 433 (471)
Q Consensus 381 ~GvP~l~~P~~~DQ~~n-a~~v~~~-~G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 433 (471)
.|+|++++-..+.|-+. -..-+.+ -|+.--+. ...++++|.+.+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakkegvsydvl----kstdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVL----KSTDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEE----ECCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhcCcchhhh----ccCCHHHHHHHHHHHHH
Confidence 58888887776666432 2222221 25555443 55678999988888773
No 383
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=28.52 E-value=32 Score=33.83 Aligned_cols=35 Identities=9% Similarity=0.180 Sum_probs=28.1
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
|.||+++-.+..| +.+|+.|.+.|++||++...++
T Consensus 42 KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 42 KPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCCC
Confidence 6799999876555 4678999999999999987543
No 384
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=28.52 E-value=69 Score=26.94 Aligned_cols=34 Identities=24% Similarity=0.267 Sum_probs=24.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
|||+++ |+.|.+- ..|++.|.++||+|+.++-..
T Consensus 5 ~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcCc
Confidence 677665 4445443 578899999999999987653
No 385
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=28.48 E-value=55 Score=28.74 Aligned_cols=31 Identities=23% Similarity=0.089 Sum_probs=25.8
Q ss_pred CCeeEEEECCCcc------hHHHHHHHcCCceEEEeC
Q 012083 126 EKITCVIADVTFG------WALQVAAKLELKKASIYT 156 (471)
Q Consensus 126 ~~pD~vV~D~~~~------~~~~~A~~lgiP~v~~~~ 156 (471)
.+||+|++..... -+..+|+.||+|++....
T Consensus 112 ~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 112 EGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp HTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred cCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 5799999887653 578899999999998754
No 386
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=28.43 E-value=53 Score=33.99 Aligned_cols=109 Identities=6% Similarity=-0.002 Sum_probs=71.5
Q ss_pred eccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCC----CCCCcCHhHHH
Q 012083 350 KWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPD----DNGIIGRHEIK 425 (471)
Q Consensus 350 ~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~----~~~~~~~~~l~ 425 (471)
++..-.++|..+++ +||-- ...+.|.+..++|++....-.|+..+- . .| ...+.+ ..-.-+.++|.
T Consensus 605 ~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~----~-rg--~y~d~~~~~pg~~~~~~~eL~ 674 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG----L-RG--FYMNYMEDLPGPIYTEPYGLA 674 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS----C-CS--BSSCTTSSSSSCEESSHHHHH
T ss_pred CCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc----c-CC--cccChhHhCCCCeECCHHHHH
Confidence 44455678866666 99984 457889999999999987766665321 1 12 232210 01234678999
Q ss_pred HHHHHHhCc-HHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012083 426 RKVDELLSN-DVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469 (471)
Q Consensus 426 ~~i~~ll~~-~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 469 (471)
++|.....+ ..|+++.+++.+++-.. ++|.++...++.+.+..
T Consensus 675 ~~i~~~~~~~~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~ 718 (729)
T 3l7i_A 675 KELKNLDKVQQQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDI 718 (729)
T ss_dssp HHHTTHHHHHHHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHH
T ss_pred HHHhhhhccchhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcC
Confidence 999888763 57888888888888653 55666666666555543
No 387
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=28.35 E-value=91 Score=22.74 Aligned_cols=34 Identities=18% Similarity=0.141 Sum_probs=22.9
Q ss_pred CCeeEEEECCCcc--hHHHHHHH----cCCceEEEeCchH
Q 012083 126 EKITCVIADVTFG--WALQVAAK----LELKKASIYTSAP 159 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~----lgiP~v~~~~~~~ 159 (471)
.+||+||.|.... .+..+++. -.+|.+.++....
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 85 (123)
T 1xhf_A 46 YDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDN 85 (123)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCCS
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCCC
Confidence 7899999998654 34434333 4688888776543
No 388
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=28.29 E-value=81 Score=22.98 Aligned_cols=34 Identities=9% Similarity=0.178 Sum_probs=23.0
Q ss_pred CCeeEEEECCCcc--hHHHHHHHc----CCceEEEeCchH
Q 012083 126 EKITCVIADVTFG--WALQVAAKL----ELKKASIYTSAP 159 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~l----giP~v~~~~~~~ 159 (471)
.+||+||.|.... .+..+++.+ .+|.+.++....
T Consensus 45 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 84 (122)
T 1zgz_A 45 QSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSD 84 (122)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSCC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCCC
Confidence 7899999997654 344444443 578888766543
No 389
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=28.24 E-value=41 Score=30.69 Aligned_cols=33 Identities=9% Similarity=0.156 Sum_probs=27.2
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCC-CeEEEEeCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCR-IKVTFVTTE 54 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rG-h~Vt~~~~~ 54 (471)
.|||.|+-.|..| .++|+.|++.| |+|++....
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECGG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeCC
Confidence 3799999877666 67899999999 999987553
No 390
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=28.24 E-value=68 Score=27.96 Aligned_cols=43 Identities=14% Similarity=0.236 Sum_probs=27.1
Q ss_pred ccccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 10 SESLNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 10 ~~~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
.+.|...+-|+++++.++.| --.++|+.|+++|++|.++....
T Consensus 21 ~~~m~~l~~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~~ 63 (262)
T 3rkr_A 21 DKHMSSLSGQVAVVTGASRG---IGAAIARKLGSLGARVVLTARDV 63 (262)
T ss_dssp ----CTTTTCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred cchhhccCCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEECCH
Confidence 34464434467777755543 34678999999999998876543
No 391
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=28.22 E-value=53 Score=28.60 Aligned_cols=38 Identities=24% Similarity=0.259 Sum_probs=29.7
Q ss_pred cEEEEE--cCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLV--SFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~--~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
+|++.+ +-++-|=..-.+.||..|+++|++|.++-...
T Consensus 2 ~~~I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 2 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 454433 35577899999999999999999999986544
No 392
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=28.20 E-value=1.6e+02 Score=22.01 Aligned_cols=63 Identities=10% Similarity=-0.067 Sum_probs=35.1
Q ss_pred cCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHH
Q 012083 381 MGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELA 448 (471)
Q Consensus 381 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~ 448 (471)
...|++++--..|.......+.. .|+--.+. +.++.++|..+|+.++.........+++....
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~-~ga~~~l~----KP~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~ 133 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAIND-AGIHQFLT----KPWHPEQLLSSARNAARMFTLARENERLSLEM 133 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHH-TTCCEEEE----SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHh-hchhhhcc----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677766444443333333333 24534443 45799999999999986544444444444333
No 393
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=28.14 E-value=3.1e+02 Score=25.28 Aligned_cols=39 Identities=10% Similarity=0.079 Sum_probs=32.7
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFIC 57 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~ 57 (471)
-++++..++.|=..-++.++..++..|..|.|+.+....
T Consensus 63 i~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s~ 101 (356)
T 3hr8_A 63 IVEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHAL 101 (356)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 467777788899999999999999999999999887643
No 394
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=28.05 E-value=71 Score=25.54 Aligned_cols=38 Identities=18% Similarity=0.227 Sum_probs=28.4
Q ss_pred cEEEEEcCCCcccHHHHH-HHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLM-KLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~-~La~~L~~rGh~Vt~~~~~~ 55 (471)
|||+++=+..+|+..-+. .|++.|.+.|++|.++-...
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 39 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDLRA 39 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEETTT
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 477777777788887765 57888989999998876543
No 395
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=27.98 E-value=77 Score=22.95 Aligned_cols=34 Identities=18% Similarity=0.163 Sum_probs=23.0
Q ss_pred CCeeEEEECCCcc--hHHHHHH----HcCCceEEEeCchH
Q 012083 126 EKITCVIADVTFG--WALQVAA----KLELKKASIYTSAP 159 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~----~lgiP~v~~~~~~~ 159 (471)
.+||+||.|.... .+..+++ ...+|.+.++....
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 83 (120)
T 2a9o_A 44 EQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKDS 83 (120)
T ss_dssp HCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCCS
T ss_pred CCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCCc
Confidence 6899999997654 3443333 34789888876543
No 396
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=27.91 E-value=68 Score=28.53 Aligned_cols=38 Identities=18% Similarity=0.240 Sum_probs=30.6
Q ss_pred cEEEEEcC--CCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSF--PAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~--~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
+|++.+.. ++-|=..-...||..|+++|++|.++=...
T Consensus 4 ~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 4 TRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 56655543 577899999999999999999999885554
No 397
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=27.72 E-value=26 Score=34.21 Aligned_cols=31 Identities=23% Similarity=0.261 Sum_probs=24.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
+||+++-.|-.| +.-|..|+++||+|+++--
T Consensus 2 k~VvVIGaG~~G-----L~aA~~La~~G~~V~VlEa 32 (501)
T 4dgk_A 2 KPTTVIGAGFGG-----LALAIRLQAAGIPVLLLEQ 32 (501)
T ss_dssp CCEEEECCHHHH-----HHHHHHHHHTTCCEEEECC
T ss_pred CCEEEECCcHHH-----HHHHHHHHHCCCcEEEEcc
Confidence 788888766544 5667889999999999854
No 398
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=27.69 E-value=3.2e+02 Score=24.14 Aligned_cols=31 Identities=13% Similarity=0.100 Sum_probs=21.7
Q ss_pred CCeeEEEECCCcc----hHHHHHHHcCCceEEEeC
Q 012083 126 EKITCVIADVTFG----WALQVAAKLELKKASIYT 156 (471)
Q Consensus 126 ~~pD~vV~D~~~~----~~~~~A~~lgiP~v~~~~ 156 (471)
.++|.||...... .....+...|||+|.+..
T Consensus 58 ~~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~~ 92 (330)
T 3uug_A 58 KGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDR 92 (330)
T ss_dssp HTCSEEEECCSSGGGGHHHHHHHHHTTCEEEEESS
T ss_pred cCCCEEEEEcCCchhHHHHHHHHHHCCCCEEEECC
Confidence 4799999876543 224566778999998753
No 399
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=27.68 E-value=43 Score=29.90 Aligned_cols=31 Identities=13% Similarity=0.203 Sum_probs=25.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
|||.|+-.|..|. .+|+.|.+.||+|++...
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGN-----PMAKNLMKHGYPLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHTTCCEEEECS
T ss_pred CeEEEEeccHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 4899998877775 578889999999998754
No 400
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=27.62 E-value=1e+02 Score=28.46 Aligned_cols=39 Identities=13% Similarity=0.051 Sum_probs=24.9
Q ss_pred cchhhhhccCcceeeeeccCcc----hhhHhhhcCCceeec-cc
Q 012083 352 APQEKVLAHPSVACYLTHCGWN----STMEGISMGVPFLCW-PW 390 (471)
Q Consensus 352 vpq~~lL~~~~~~~~ItHgG~~----s~~eal~~GvP~l~~-P~ 390 (471)
-...++|..+++++++-.--.. -+.+++.+|+++++= |+
T Consensus 58 ~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPl 101 (359)
T 3m2t_A 58 DNVPAMLNQVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPP 101 (359)
T ss_dssp SSHHHHHHHSCCSEEEECSCHHHHHHHHHHHHHTTCEEEECSCS
T ss_pred CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEECCC
Confidence 3567788877777666544333 256678888887662 54
No 401
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=27.55 E-value=47 Score=26.99 Aligned_cols=39 Identities=13% Similarity=0.101 Sum_probs=29.6
Q ss_pred cEEEEEcCCCc---ccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 18 VHVLLVSFPAQ---GHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 18 ~~Il~~~~~~~---GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
.+|+++|.=+. ---.+...|++.|.++|.+|.|+.+|-.
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVA 72 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVA 72 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSSS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 57888874321 1345788999999999999999998743
No 402
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=27.52 E-value=65 Score=23.70 Aligned_cols=34 Identities=9% Similarity=0.155 Sum_probs=22.6
Q ss_pred CCeeEEEECCCcc--hHHHHHHH-----cCCceEEEeCchH
Q 012083 126 EKITCVIADVTFG--WALQVAAK-----LELKKASIYTSAP 159 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~-----lgiP~v~~~~~~~ 159 (471)
.+||+||.|.... .+..+++. ..+|.+.++....
T Consensus 46 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (124)
T 1srr_A 46 ERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGE 86 (124)
T ss_dssp HCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSCC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccCc
Confidence 6899999997654 34444433 3688888876543
No 403
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=27.44 E-value=1.1e+02 Score=23.20 Aligned_cols=33 Identities=12% Similarity=0.133 Sum_probs=22.2
Q ss_pred CCeeEEEECCCcc--hHHHHHHH-------cCCceEEEeCch
Q 012083 126 EKITCVIADVTFG--WALQVAAK-------LELKKASIYTSA 158 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~-------lgiP~v~~~~~~ 158 (471)
.+||+||.|.... .+..+.+. -++|+|.++...
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (144)
T 3kht_A 50 AKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNV 91 (144)
T ss_dssp CCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCC
Confidence 7899999998755 23333332 357888887643
No 404
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=27.39 E-value=53 Score=30.29 Aligned_cols=73 Identities=14% Similarity=0.211 Sum_probs=45.9
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHh
Q 012083 299 LSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEG 378 (471)
Q Consensus 299 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~ea 378 (471)
.+.+....+.+++.....+.||.+.+.- +-.++.+++....+-++|+. ||-+.-....+-+
T Consensus 63 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-----------------g~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~a 123 (336)
T 3sr3_A 63 SIQERAKELNALIRNPNVSCIMSTIGGM-----------------NSNSLLPYIDYDAFQNNPKI--MIGYSDATALLLG 123 (336)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS-----------------CGGGGGGGSCHHHHHHSCCE--EEECGGGHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc-----------------cHHHHhhhcChhHHhhCCeE--EEEechHHHHHHH
Confidence 3556677788899888888898887651 11223444555555556665 6666666666666
Q ss_pred hh--cCCceeeccc
Q 012083 379 IS--MGVPFLCWPW 390 (471)
Q Consensus 379 l~--~GvP~l~~P~ 390 (471)
++ .|+..+-=|.
T Consensus 124 l~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 124 IYAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHHCCCEEECCC
T ss_pred HHHhcCceEEECCh
Confidence 65 4666665554
No 405
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=27.35 E-value=74 Score=24.04 Aligned_cols=34 Identities=6% Similarity=0.050 Sum_probs=23.1
Q ss_pred CCeeEEEECCCcc--hHHHHHHHc----CCceEEEeCchH
Q 012083 126 EKITCVIADVTFG--WALQVAAKL----ELKKASIYTSAP 159 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~l----giP~v~~~~~~~ 159 (471)
.+||+||.|.... .+..+++.+ .+|.+.++....
T Consensus 47 ~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~~ 86 (136)
T 2qzj_A 47 NKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYINE 86 (136)
T ss_dssp CCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCCC
Confidence 7899999997654 344444433 688888776543
No 406
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=27.24 E-value=56 Score=31.36 Aligned_cols=31 Identities=16% Similarity=0.070 Sum_probs=25.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
|||.++..|..| ..+|..|+++||+|+++..
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 589999776666 4678889999999998755
No 407
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=27.24 E-value=1.1e+02 Score=27.53 Aligned_cols=81 Identities=10% Similarity=0.031 Sum_probs=47.5
Q ss_pred EEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeee
Q 012083 288 VIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYL 367 (471)
Q Consensus 288 vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I 367 (471)
.|.++--|-.....+.+..+...|+..+..+.+..... +.... ..+.+ +. ...+.+|
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~---------~~~a~----------~~~~~--~~--~~~d~vv 68 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE---------QGDAT----------KYCQE--FA--SKVDLII 68 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS---------TTHHH----------HHHHH--HT--TTCSEEE
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC---------cchHH----------HHHHH--hh--cCCCEEE
Confidence 44555444223334556778888887777766554322 11110 00111 11 1334599
Q ss_pred eccCcchhhHhhh------cCCceeecccc
Q 012083 368 THCGWNSTMEGIS------MGVPFLCWPWG 391 (471)
Q Consensus 368 tHgG~~s~~eal~------~GvP~l~~P~~ 391 (471)
.-||-||+.|.+. .++|+.++|..
T Consensus 69 ~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 69 VFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp EEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred EEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 9999999999864 57999999973
No 408
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=27.24 E-value=56 Score=25.45 Aligned_cols=36 Identities=22% Similarity=0.219 Sum_probs=24.9
Q ss_pred cEEEEEcCCCcccHHHHH-HHHHHHHhCCCeEEEEeC
Q 012083 18 VHVLLVSFPAQGHVASLM-KLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~-~La~~L~~rGh~Vt~~~~ 53 (471)
|||+++-....|+..-+. .|++.|.+.|++|.++..
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~ 37 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDA 37 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEG
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEeh
Confidence 477766666678766544 456677778999987654
No 409
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=27.24 E-value=84 Score=23.91 Aligned_cols=31 Identities=6% Similarity=0.069 Sum_probs=20.7
Q ss_pred CCeeEEEECCCcc--hHHHHHHH-----cCCceEEEeC
Q 012083 126 EKITCVIADVTFG--WALQVAAK-----LELKKASIYT 156 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~-----lgiP~v~~~~ 156 (471)
.+||+||.|.... .+..+++. -++|.+.++.
T Consensus 48 ~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~ 85 (141)
T 3cu5_A 48 HPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSG 85 (141)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeC
Confidence 6899999997654 34444433 2577777654
No 410
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=27.22 E-value=1.1e+02 Score=28.82 Aligned_cols=22 Identities=23% Similarity=0.256 Sum_probs=15.5
Q ss_pred HHHHHHHHHhCC-CeEEEEeCCc
Q 012083 34 LMKLAHRLADCR-IKVTFVTTEF 55 (471)
Q Consensus 34 ~~~La~~L~~rG-h~Vt~~~~~~ 55 (471)
.-.|++.+.+.| .+|.+++.+.
T Consensus 19 ~~~l~~~~~~~g~~~~liVtd~~ 41 (383)
T 3ox4_A 19 LEKAIKDLNGSGFKNALIVSDAF 41 (383)
T ss_dssp HHHHHHTTTTSCCCEEEEEEEHH
T ss_pred HHHHHHHHHHcCCCEEEEEECCc
Confidence 445677777777 6788887764
No 411
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=27.17 E-value=1.3e+02 Score=23.97 Aligned_cols=38 Identities=18% Similarity=0.188 Sum_probs=29.1
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
+|||+|+..++... .-+....+.|.+.|++|++++...
T Consensus 2 ~~ki~il~~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~~ 39 (168)
T 3l18_A 2 SMKVLFLSADGFED-LELIYPLHRIKEEGHEVYVASFQR 39 (168)
T ss_dssp CCEEEEECCTTBCH-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcEEEEEeCCCccH-HHHHHHHHHHHHCCCEEEEEECCC
Confidence 46999998886544 345566788888999999998754
No 412
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=27.16 E-value=48 Score=30.36 Aligned_cols=32 Identities=9% Similarity=0.088 Sum_probs=22.8
Q ss_pred CCeeEEEECCCcchHHHHHHHcCCceEEEeCc
Q 012083 126 EKITCVIADVTFGWALQVAAKLELKKASIYTS 157 (471)
Q Consensus 126 ~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~ 157 (471)
.+||+||..........--++.|||++.+...
T Consensus 115 l~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~ 146 (335)
T 4hn9_A 115 ATPDVVFLPMKLKKTADTLESLGIKAVVVNPE 146 (335)
T ss_dssp TCCSEEEEEGGGHHHHHHHHHTTCCEEEECCC
T ss_pred cCCCEEEEeCcchhHHHHHHHcCCCEEEEcCC
Confidence 79999998754333344456789999998643
No 413
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=27.12 E-value=57 Score=29.94 Aligned_cols=27 Identities=7% Similarity=0.048 Sum_probs=21.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEcCC
Q 012083 299 LSQQQFNELALGLELAGQPFLCGVRPG 325 (471)
Q Consensus 299 ~~~~~~~~~~~al~~~~~~~i~~~~~~ 325 (471)
.+.+....+.+++.....+.||.+.+.
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGG 88 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCc
Confidence 355667779999998888999988765
No 414
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=27.09 E-value=81 Score=24.37 Aligned_cols=43 Identities=9% Similarity=0.140 Sum_probs=0.0
Q ss_pred HHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHc-----CCceEEEeCch
Q 012083 112 LEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKL-----ELKKASIYTSA 158 (471)
Q Consensus 112 ~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 158 (471)
..+.++.+.. .+||+||.|.... .+..+++.+ ++|+|.++...
T Consensus 47 ~~~a~~~l~~----~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 47 ATQALQLLAS----REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp HHHHHHHHHH----SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred HHHHHHHHHc----CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC
No 415
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=27.06 E-value=55 Score=29.45 Aligned_cols=33 Identities=9% Similarity=0.076 Sum_probs=23.5
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
+|+++ |+.|.+- ..|+++|.++||+|+.++-..
T Consensus 13 ~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIF--GGTGYIG--NHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEE--CCCchHH--HHHHHHHHHCCCcEEEEECCC
Confidence 56655 4444442 467899999999999887654
No 416
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=26.78 E-value=71 Score=27.97 Aligned_cols=33 Identities=12% Similarity=0.147 Sum_probs=25.0
Q ss_pred CCeeEEEE-CCCcc-hHHHHHHHcCCceEEEeCch
Q 012083 126 EKITCVIA-DVTFG-WALQVAAKLELKKASIYTSA 158 (471)
Q Consensus 126 ~~pD~vV~-D~~~~-~~~~~A~~lgiP~v~~~~~~ 158 (471)
..||+||+ |...- .+..=|.++|||+|.++-+.
T Consensus 150 ~~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDTn 184 (253)
T 3bch_A 150 REPRLLVVTDPRADHQPLTEASYVNLPTIALCNTD 184 (253)
T ss_dssp CSCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCCEEEEECCCccchHHHHHHHhCCCEEEEEcCC
Confidence 57888774 55433 67888999999999987654
No 417
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=26.74 E-value=44 Score=32.31 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=26.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
|||.|+..|..| .++|..|+++||+|+++....
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECCH
Confidence 799999766555 568999999999999886643
No 418
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=26.66 E-value=65 Score=26.14 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=22.9
Q ss_pred CCeeEEEECCCcc--hHHHHHH-----HcCCceEEEeCchH
Q 012083 126 EKITCVIADVTFG--WALQVAA-----KLELKKASIYTSAP 159 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~-----~lgiP~v~~~~~~~ 159 (471)
.+||+||.|.... .+..+++ .-++|+|.++...-
T Consensus 50 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~~ 90 (184)
T 3rqi_A 50 EKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYAS 90 (184)
T ss_dssp SCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSCC
T ss_pred CCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCCC
Confidence 7899999998755 3343333 23688888876543
No 419
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=26.60 E-value=2.6e+02 Score=22.78 Aligned_cols=141 Identities=13% Similarity=0.102 Sum_probs=75.9
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceee
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACY 366 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ 366 (471)
+.|-|-+|| ..+....++....|+..+..+-+.+.+- ...|+.+.+. +-.. ....++++
T Consensus 8 ~~V~IimgS--~SD~~v~~~a~~~L~~~gi~~ev~V~Sa------HR~p~~~~~~----------~~~a---~~~g~~Vi 66 (174)
T 3lp6_A 8 PRVGVIMGS--DSDWPVMADAAAALAEFDIPAEVRVVSA------HRTPEAMFSY----------ARGA---AARGLEVI 66 (174)
T ss_dssp CSEEEEESC--GGGHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHHH----------HHHH---HHHTCCEE
T ss_pred CeEEEEECc--HHhHHHHHHHHHHHHHcCCCEEEEEECC------CCCHHHHHHH----------HHHH---HhCCCCEE
Confidence 356666676 3456667788889999998876655433 2344442211 1110 01122337
Q ss_pred eeccCcc----hhhHhhhcCCceeecccccchh--hhHH-HHHh-hhcceee-ecCCCCCCcCHhHHHHHHHHHhCcHHH
Q 012083 367 LTHCGWN----STMEGISMGVPFLCWPWGHDHL--YIKS-CICD-DWKIGLW-LEPDDNGIIGRHEIKRKVDELLSNDVV 437 (471)
Q Consensus 367 ItHgG~~----s~~eal~~GvP~l~~P~~~DQ~--~na~-~v~~-~~G~G~~-~~~~~~~~~~~~~l~~~i~~ll~~~~~ 437 (471)
|.=+|.. ++..++ .-+|+|.+|...-.. ..+. -+.+ --|+.+. +.. ++.++..-++..| --+.|+++
T Consensus 67 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I--~~~~nAa~lAa~I-l~~~d~~l 142 (174)
T 3lp6_A 67 IAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSI--GGAGNAGLLAVRM-LGAANPQL 142 (174)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCT--TCHHHHHHHHHHH-HHTTCHHH
T ss_pred EEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEc--CcchHHHHHHHHH-HhCCCHHH
Confidence 7766643 344333 568999999753211 1111 1111 0154322 222 1344444444444 34568899
Q ss_pred HHHHHHHHHHHHHHh
Q 012083 438 RKNALKLKELAQKSV 452 (471)
Q Consensus 438 ~~~a~~l~~~~~~~~ 452 (471)
+++.+.++++.++.+
T Consensus 143 ~~kl~~~r~~~~~~v 157 (174)
T 3lp6_A 143 RARIVAFQDRLADVV 157 (174)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999998888764
No 420
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=26.51 E-value=61 Score=28.14 Aligned_cols=30 Identities=13% Similarity=0.026 Sum_probs=22.3
Q ss_pred CCeeEEEECCCcc--hHHHHHHHcCCceEEEe
Q 012083 126 EKITCVIADVTFG--WALQVAAKLELKKASIY 155 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~ 155 (471)
.+||+||...... ....--+..|||++.+.
T Consensus 58 l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 58 MKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred cCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 7999999887653 23444567899999875
No 421
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=26.51 E-value=43 Score=32.67 Aligned_cols=33 Identities=18% Similarity=0.102 Sum_probs=28.1
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC-CC-eEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC-RI-KVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r-Gh-~Vt~~~~~~ 55 (471)
|||.|+..|..| .++|..|++. || +|+++-...
T Consensus 19 mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 19 KKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCC
T ss_pred CEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECCh
Confidence 899999888888 4788999999 99 999886543
No 422
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=26.45 E-value=95 Score=26.37 Aligned_cols=46 Identities=13% Similarity=0.087 Sum_probs=31.6
Q ss_pred HHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeC
Q 012083 111 YLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYT 156 (471)
Q Consensus 111 ~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~ 156 (471)
.++++++..+...-..+.-+||+|.-...+...|+.+|||+..+.+
T Consensus 15 nl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~ 60 (211)
T 3p9x_A 15 NAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDP 60 (211)
T ss_dssp HHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCG
T ss_pred HHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeCh
Confidence 4566666654422114677889986655677899999999988654
No 423
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=26.45 E-value=3.3e+02 Score=23.88 Aligned_cols=31 Identities=10% Similarity=0.011 Sum_probs=20.7
Q ss_pred CCeeEEEECCCcc----hHHHHHHHcCCceEEEeC
Q 012083 126 EKITCVIADVTFG----WALQVAAKLELKKASIYT 156 (471)
Q Consensus 126 ~~pD~vV~D~~~~----~~~~~A~~lgiP~v~~~~ 156 (471)
.++|.||...... .....+...|||+|.+..
T Consensus 57 ~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 91 (313)
T 3m9w_A 57 RGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 91 (313)
T ss_dssp TTCSEEEEECSSTTSCHHHHHHHHTTTCEEEEESS
T ss_pred cCCCEEEEeCCChhhhHHHHHHHHHCCCeEEEECC
Confidence 6888888766543 234455667899888753
No 424
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=26.44 E-value=1.2e+02 Score=24.66 Aligned_cols=42 Identities=5% Similarity=0.129 Sum_probs=30.4
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCC--CeEEEEeCCcchh
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCR--IKVTFVTTEFICE 58 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rG--h~Vt~~~~~~~~~ 58 (471)
.+.+|.+++ ++.+++--+-..++.|.+-| |+|.+++....-+
T Consensus 5 ~~~~V~Iim-gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~ 48 (169)
T 3trh_A 5 NKIFVAILM-GSDSDLSTMETAFTELKSLGIPFEAHILSAHRTPK 48 (169)
T ss_dssp -CCEEEEEE-SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHH
T ss_pred CCCcEEEEE-CcHHhHHHHHHHHHHHHHcCCCEEEEEEcccCCHH
Confidence 446788777 88999999999999999887 5566655444333
No 425
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=26.39 E-value=35 Score=30.91 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
.|||.|+-.+..|. ++|+.|+++||+|++...
T Consensus 9 ~~~IgiIG~G~mG~-----~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 9 EFDVSVIGLGAMGT-----IMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp SCSEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 47999997766554 688999999999998754
No 426
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=26.35 E-value=2.8e+02 Score=25.32 Aligned_cols=35 Identities=9% Similarity=0.060 Sum_probs=25.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
-|+++++.++.| --.++|+.|+++|++|.++.-..
T Consensus 45 gk~vlVTGas~G---IG~aia~~La~~Ga~Vvl~~r~~ 79 (346)
T 3kvo_A 45 GCTVFITGASRG---IGKAIALKAAKDGANIVIAAKTA 79 (346)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESCC
T ss_pred CCEEEEeCCChH---HHHHHHHHHHHCCCEEEEEECCh
Confidence 467777766653 23578999999999999886543
No 427
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=26.34 E-value=46 Score=27.84 Aligned_cols=35 Identities=6% Similarity=-0.038 Sum_probs=22.9
Q ss_pred cEEEEEcCCCccc-HHHHHHHHHHHHhCCCeEEEEe
Q 012083 18 VHVLLVSFPAQGH-VASLMKLAHRLADCRIKVTFVT 52 (471)
Q Consensus 18 ~~Il~~~~~~~GH-~~p~~~La~~L~~rGh~Vt~~~ 52 (471)
|||+++...-..+ -.-..++++.+.+.|++|++.-
T Consensus 2 mkiLiI~gsp~~~~s~l~~~l~~~~~~~g~ev~~~d 37 (192)
T 3f2v_A 2 PKTLIILAHPNISQSTVHKHWSDAVRQHTDRFTVHE 37 (192)
T ss_dssp CCEEEEECCTTGGGCSHHHHHHHHHTTCTTTEEEEE
T ss_pred CEEEEEEeCCCccHHHHHHHHHHHHHhCCCeEEEEE
Confidence 7887766444333 1345566777778899888754
No 428
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=26.26 E-value=39 Score=27.66 Aligned_cols=35 Identities=11% Similarity=0.009 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCc
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADC-RIKVTFVTTEF 55 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~r-Gh~Vt~~~~~~ 55 (471)
.++||+++..|..| ..+|+.|.+. ||+|+++....
T Consensus 38 ~~~~v~IiG~G~~G-----~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIG-----TGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHH-----HHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHhccCCeEEEEECCH
Confidence 35689998654333 4678899999 99999987643
No 429
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=26.24 E-value=51 Score=28.10 Aligned_cols=34 Identities=9% Similarity=0.062 Sum_probs=23.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
||+++++.++.| --.++|+.|+++|++|.++...
T Consensus 1 Mk~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGASSG---LGAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTTSH---HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 466677755543 2357899999999999888654
No 430
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=26.22 E-value=72 Score=31.36 Aligned_cols=42 Identities=14% Similarity=0.056 Sum_probs=34.5
Q ss_pred CcEEEEEcCC---CcccHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 012083 17 NVHVLLVSFP---AQGHVASLMKLAHRLADCRIKVTFVTTEFICE 58 (471)
Q Consensus 17 ~~~Il~~~~~---~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~ 58 (471)
++|.+|++.+ +-|--.-...|++-|..||++||..=.+++..
T Consensus 2 ~~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpyln 46 (535)
T 3nva_A 2 PNKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYIN 46 (535)
T ss_dssp CCEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECSSS
T ss_pred CceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCccee
Confidence 3799999987 45667778899999999999999987766654
No 431
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=26.22 E-value=2.5e+02 Score=24.92 Aligned_cols=26 Identities=12% Similarity=-0.055 Sum_probs=21.8
Q ss_pred cCCHHHHHHHHHHHHhCCCCEEEEEc
Q 012083 298 KLSQQQFNELALGLELAGQPFLCGVR 323 (471)
Q Consensus 298 ~~~~~~~~~~~~al~~~~~~~i~~~~ 323 (471)
.++.+....+++++.+.+...|-...
T Consensus 22 ~~~~e~k~~i~~~L~~~Gv~~IE~g~ 47 (295)
T 1ydn_A 22 FVPTADKIALINRLSDCGYARIEATS 47 (295)
T ss_dssp CCCHHHHHHHHHHHTTTTCSEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEcc
Confidence 46788899999999999999886654
No 432
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=26.21 E-value=95 Score=25.02 Aligned_cols=29 Identities=24% Similarity=0.240 Sum_probs=24.7
Q ss_pred EEEEecCccccCCHHHHHHHHHHHHhCCC
Q 012083 288 VIYAAFGSISKLSQQQFNELALGLELAGQ 316 (471)
Q Consensus 288 vv~vs~GS~~~~~~~~~~~~~~al~~~~~ 316 (471)
.+|+++||......+.+...+.++++.+.
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~~ 31 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLPR 31 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCTT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCCC
Confidence 58999999988888889999999987643
No 433
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=26.17 E-value=55 Score=27.51 Aligned_cols=34 Identities=12% Similarity=0.126 Sum_probs=24.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
|||+++ |+.|.+- ..|+++|.++||+|+.++-..
T Consensus 1 MkilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MKIAVL--GATGRAG--SAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEE--cCCCHHH--HHHHHHHHHCCCEEEEEEecc
Confidence 476555 4445443 578899999999999987653
No 434
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=26.10 E-value=82 Score=23.22 Aligned_cols=32 Identities=13% Similarity=0.084 Sum_probs=21.1
Q ss_pred CCeeEEEECCCcc--hHHHHHH-------HcCCceEEEeCc
Q 012083 126 EKITCVIADVTFG--WALQVAA-------KLELKKASIYTS 157 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~-------~lgiP~v~~~~~ 157 (471)
.+||+||.|.... .+..+++ ..++|++.++..
T Consensus 46 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 86 (127)
T 3i42_A 46 RGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGF 86 (127)
T ss_dssp SCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECC
Confidence 7899999997654 3433333 245788877653
No 435
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=26.00 E-value=1.1e+02 Score=22.13 Aligned_cols=34 Identities=12% Similarity=0.100 Sum_probs=22.6
Q ss_pred CCeeEEEECCCcc--hHHHHHHH-----cCCceEEEeCchH
Q 012083 126 EKITCVIADVTFG--WALQVAAK-----LELKKASIYTSAP 159 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~-----lgiP~v~~~~~~~ 159 (471)
.+||+||.|.... .+..+++. ..+|++.++....
T Consensus 43 ~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 83 (121)
T 2pl1_A 43 HIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARES 83 (121)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCCC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCCC
Confidence 7899999997654 34433332 3588888876543
No 436
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=25.94 E-value=48 Score=31.13 Aligned_cols=35 Identities=14% Similarity=0.134 Sum_probs=27.0
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
++++|+++..|.. -+..|..|+++||+|+++-...
T Consensus 2 ~~~~v~iiG~G~~-----Gl~~A~~l~~~g~~v~v~E~~~ 36 (384)
T 2bi7_A 2 KSKKILIVGAGFS-----GAVIGRQLAEKGHQVHIIDQRD 36 (384)
T ss_dssp CCCEEEEECCSHH-----HHHHHHHHHTTTCEEEEEESSS
T ss_pred CcCCEEEECcCHH-----HHHHHHHHHHCCCcEEEEEecC
Confidence 3479999876644 4567889999999999997543
No 437
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=25.92 E-value=1.4e+02 Score=24.29 Aligned_cols=39 Identities=8% Similarity=0.036 Sum_probs=29.6
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
+.+||+|+.+++.. ..-+....+.|.+.|++|++++...
T Consensus 8 ~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 8 TGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp TTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 34799999876554 4456667788889999999998753
No 438
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=25.91 E-value=44 Score=28.37 Aligned_cols=32 Identities=22% Similarity=0.159 Sum_probs=24.1
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|||+|+..|..| ..+++.|.+.||+|+++...
T Consensus 29 ~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFA-----RSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 789999654444 35788899999999987653
No 439
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=25.91 E-value=2.8e+02 Score=26.35 Aligned_cols=26 Identities=12% Similarity=0.316 Sum_probs=19.6
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRI 46 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh 46 (471)
.+|||+++..+++. .+||++|++.+.
T Consensus 20 ~~m~ilvlG~ggre-----~ala~~l~~s~~ 45 (442)
T 3lp8_A 20 GSMNVLVIGSGGRE-----HSMLHHIRKSTL 45 (442)
T ss_dssp CCEEEEEEECSHHH-----HHHHHHHTTCTT
T ss_pred CCCEEEEECCChHH-----HHHHHHHHhCCC
Confidence 35899999877544 468999988754
No 440
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=25.86 E-value=96 Score=23.24 Aligned_cols=63 Identities=8% Similarity=-0.039 Sum_probs=42.2
Q ss_pred cCcceeeeeccCcch---------hhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHH
Q 012083 360 HPSVACYLTHCGWNS---------TMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDE 430 (471)
Q Consensus 360 ~~~~~~~ItHgG~~s---------~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ 430 (471)
.++| +|--.|..| +..|...|+|++++=-++.+. --..+.+ .|..+ -..+.+.|.++|+.
T Consensus 38 ~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~---~a~~i-----V~Wn~~~I~~aI~~ 106 (111)
T 1eiw_A 38 DADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEA---VSSEV-----VGWNPHCIRDALED 106 (111)
T ss_dssp SCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHH---HCSEE-----ECSCHHHHHHHHHH
T ss_pred cCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHh---hCcee-----ccCCHHHHHHHHHh
Confidence 3555 899999888 567788999999886665441 1112343 22222 23688999999988
Q ss_pred HhC
Q 012083 431 LLS 433 (471)
Q Consensus 431 ll~ 433 (471)
.++
T Consensus 107 ~~~ 109 (111)
T 1eiw_A 107 ALD 109 (111)
T ss_dssp HHC
T ss_pred ccC
Confidence 763
No 441
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=25.84 E-value=74 Score=27.44 Aligned_cols=32 Identities=13% Similarity=0.063 Sum_probs=22.5
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
|.++++.++.| --.++++.|+++|++|.++.-
T Consensus 2 k~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 2 SIIVISGCATG---IGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 55666644432 245789999999999988754
No 442
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=25.83 E-value=79 Score=26.33 Aligned_cols=38 Identities=8% Similarity=-0.053 Sum_probs=27.4
Q ss_pred CcEEEEEcCCC---cccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 17 NVHVLLVSFPA---QGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 17 ~~~Il~~~~~~---~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
+|+|.+++... ..+..-...|++.|+++||.|..-..+
T Consensus 13 ~~~I~Vfg~s~~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 13 RWTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CeEEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 47999988654 123455778889999999987776544
No 443
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=25.74 E-value=85 Score=27.50 Aligned_cols=40 Identities=20% Similarity=0.024 Sum_probs=27.4
Q ss_pred ccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 12 SLNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 12 ~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
+|..-+-|+++++.++.| --.++|+.|+++|++|.+....
T Consensus 21 ~m~~l~gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~r~ 60 (266)
T 3grp_A 21 SMFKLTGRKALVTGATGG---IGEAIARCFHAQGAIVGLHGTR 60 (266)
T ss_dssp CTTCCTTCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred chhccCCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 343334467777765543 2357899999999999988654
No 444
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=25.71 E-value=1.3e+02 Score=23.29 Aligned_cols=43 Identities=7% Similarity=-0.020 Sum_probs=29.1
Q ss_pred EEEEEc-CCCccc--HHHHHHHHHHHHhCCCeEEEEeCCcchhhhH
Q 012083 19 HVLLVS-FPAQGH--VASLMKLAHRLADCRIKVTFVTTEFICERIK 61 (471)
Q Consensus 19 ~Il~~~-~~~~GH--~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~ 61 (471)
|++|+- .+-+|+ ..-.+.+|.++...||+|.++-..+-.....
T Consensus 7 k~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DGV~~~~ 52 (136)
T 2hy5_B 7 KFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDGVYQLT 52 (136)
T ss_dssp EEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGGGGGGB
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHHHh
Confidence 464444 344454 3446777999999999999888776655443
No 445
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=25.62 E-value=1.5e+02 Score=26.40 Aligned_cols=40 Identities=10% Similarity=0.140 Sum_probs=29.8
Q ss_pred HHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEe
Q 012083 112 LEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIY 155 (471)
Q Consensus 112 ~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~ 155 (471)
+.++++.+++ .+..+|+++.... .+-.+|+..|++.+.+.
T Consensus 215 l~~l~~~ik~----~~v~~if~e~~~~~~~~~~ia~~~g~~v~~l~ 256 (284)
T 3cx3_A 215 LTEIQEFVKT----YKVKTIFTESNASSKVAETLVKSTGVGLKTLN 256 (284)
T ss_dssp HHHHHHHHHH----TTCCCEEECSSSCCHHHHHHHSSSSCCEEECC
T ss_pred HHHHHHHHHH----cCCCEEEEeCCCCcHHHHHHHHHcCCeEEEec
Confidence 4444555554 8999999998766 56678999999988754
No 446
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=25.60 E-value=1.2e+02 Score=25.07 Aligned_cols=37 Identities=16% Similarity=0.344 Sum_probs=26.3
Q ss_pred cEE-EEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHV-LLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~I-l~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
.|| +|+..+...+-.....+++.|++.|++|.+++..
T Consensus 107 ~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G 144 (192)
T 2x5n_A 107 QRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIG 144 (192)
T ss_dssp EEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEES
T ss_pred ceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeC
Confidence 354 4555444456677888999999999998877554
No 447
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=25.55 E-value=2.7e+02 Score=25.78 Aligned_cols=33 Identities=18% Similarity=0.064 Sum_probs=25.0
Q ss_pred CCeeEEEECCCcc---hHHHHHHHcCCceEEEeCch
Q 012083 126 EKITCVIADVTFG---WALQVAAKLELKKASIYTSA 158 (471)
Q Consensus 126 ~~pD~vV~D~~~~---~~~~~A~~lgiP~v~~~~~~ 158 (471)
.++|+||.=.-.. .+-.+|...++|+|.+.|+.
T Consensus 87 ~~~D~IIavGGGs~iD~aK~iA~~~~~P~i~IPTTa 122 (364)
T 3iv7_A 87 NEIDLLVCVGGGSTIGLAKAIAMTTALPIVAIPTTY 122 (364)
T ss_dssp TTCCEEEEEESHHHHHHHHHHHHHHCCCEEEEECSS
T ss_pred cCCCEEEEeCCcHHHHHHHHHHhccCCCEEEEcCCc
Confidence 7999998644322 45567788999999998876
No 448
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=25.49 E-value=1e+02 Score=23.18 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=21.8
Q ss_pred CCeeEEEECCCcc--hHHHHHHH-----cCCceEEEeCch
Q 012083 126 EKITCVIADVTFG--WALQVAAK-----LELKKASIYTSA 158 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~-----lgiP~v~~~~~~ 158 (471)
.+||+||.|.... .+..+++. ..+|.+.++...
T Consensus 43 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~~s~~~ 82 (139)
T 2jk1_A 43 EWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGYT 82 (139)
T ss_dssp SCEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEESCT
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEeCCC
Confidence 7899999998654 34444432 257887776543
No 449
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=25.44 E-value=1.8e+02 Score=27.05 Aligned_cols=34 Identities=15% Similarity=-0.079 Sum_probs=21.9
Q ss_pred CCeeEEEECCC-cc--hHHHHHHHc--------------------CCceEEEeCchH
Q 012083 126 EKITCVIADVT-FG--WALQVAAKL--------------------ELKKASIYTSAP 159 (471)
Q Consensus 126 ~~pD~vV~D~~-~~--~~~~~A~~l--------------------giP~v~~~~~~~ 159 (471)
.++|+||.=.- .. .+-.+|..+ ++|+|.+.|+..
T Consensus 87 ~~~d~IIavGGGsv~D~aK~iA~~~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~g 143 (386)
T 1rrm_A 87 SGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAG 143 (386)
T ss_dssp HTCSEEEEEESHHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSS
T ss_pred cCcCEEEEeCChHHHHHHHHHHHHHhCCCCCCHHHHhcccccCCCCCCEEEEeCCCC
Confidence 68899994432 11 444455544 899999887664
No 450
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=25.40 E-value=3.2e+02 Score=25.88 Aligned_cols=32 Identities=16% Similarity=0.210 Sum_probs=23.8
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
.||+++.. | .-...+++++++.|++|.++...
T Consensus 3 k~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~~ 34 (451)
T 1ulz_A 3 NKVLVANR---G--EIAVRIIRACKELGIPTVAIYNE 34 (451)
T ss_dssp SSEEECCC---H--HHHHHHHHHHHHHTCCEEEEECG
T ss_pred ceEEEECC---c--HHHHHHHHHHHHcCCeEEEEech
Confidence 46887753 3 23567999999999999988753
No 451
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=25.32 E-value=1.1e+02 Score=22.45 Aligned_cols=33 Identities=18% Similarity=0.146 Sum_probs=22.2
Q ss_pred CCeeEEEECCCcc--hHHHHHHHc-------CCceEEEeCch
Q 012083 126 EKITCVIADVTFG--WALQVAAKL-------ELKKASIYTSA 158 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 158 (471)
.+||+||.|.... .+..+++.+ .+|.+.++...
T Consensus 48 ~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~~ 89 (128)
T 1jbe_A 48 GGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAEA 89 (128)
T ss_dssp CCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESSC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecCc
Confidence 7899999998765 344444433 46778776643
No 452
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=25.14 E-value=77 Score=25.53 Aligned_cols=28 Identities=29% Similarity=0.172 Sum_probs=23.0
Q ss_pred EEEEecCccccCCHHHHHHHHHHHHhCC
Q 012083 288 VIYAAFGSISKLSQQQFNELALGLELAG 315 (471)
Q Consensus 288 vv~vs~GS~~~~~~~~~~~~~~al~~~~ 315 (471)
.+|+++||......+.+...+.+|++.+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 6899999987767777888888888764
No 453
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=25.09 E-value=1.7e+02 Score=22.36 Aligned_cols=52 Identities=10% Similarity=-0.020 Sum_probs=32.8
Q ss_pred cCCceeecccccchhhhHHHHHhhhc-ceeeecCCCCCCcCHhHHHHHHHHHhCcHHHH
Q 012083 381 MGVPFLCWPWGHDHLYIKSCICDDWK-IGLWLEPDDNGIIGRHEIKRKVDELLSNDVVR 438 (471)
Q Consensus 381 ~GvP~l~~P~~~DQ~~na~~v~~~~G-~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~ 438 (471)
..+|++++--..|.. ......+ .| +--.+. +.++.++|.++|+.++....+.
T Consensus 75 ~~~~ii~~s~~~~~~-~~~~~~~-~g~~~~~l~----KP~~~~~L~~~i~~~l~~~~~~ 127 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLT-TAMEAVN-EGQVFRFLN----KPCQMSDIKAAINAGIKQYDLV 127 (151)
T ss_dssp SSCEEEEEECGGGHH-HHHHHHH-HTCCSEEEE----SSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHH-HHHHHHH-cCCeeEEEc----CCCCHHHHHHHHHHHHHHHHHH
Confidence 467777765444433 3333344 36 534453 4579999999999999765443
No 454
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=25.08 E-value=73 Score=27.81 Aligned_cols=40 Identities=20% Similarity=0.140 Sum_probs=30.2
Q ss_pred cEEEEEc--CCCcccHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 012083 18 VHVLLVS--FPAQGHVASLMKLAHRLADCRIKVTFVTTEFIC 57 (471)
Q Consensus 18 ~~Il~~~--~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~ 57 (471)
+|++.+. -|+-|=..-...||..|+++|++|.++=.....
T Consensus 18 ~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 18 KSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp SCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4444433 446788999999999999999999998655443
No 455
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=24.96 E-value=69 Score=27.72 Aligned_cols=34 Identities=6% Similarity=-0.109 Sum_probs=24.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
.|.++++.++.| --.++|++|+++|++|.++...
T Consensus 22 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 22 SKNILVLGGSGA---LGAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 466677655543 2368899999999999887654
No 456
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=24.91 E-value=79 Score=25.48 Aligned_cols=29 Identities=28% Similarity=0.186 Sum_probs=22.5
Q ss_pred EEEEecCccccCCHHHHHHHHHHHHhCCC
Q 012083 288 VIYAAFGSISKLSQQQFNELALGLELAGQ 316 (471)
Q Consensus 288 vv~vs~GS~~~~~~~~~~~~~~al~~~~~ 316 (471)
+.|+++||.-..+.+.+...+..+.+...
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~~ 30 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIPE 30 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTT
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCCC
Confidence 67999999876666778888888876543
No 457
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=24.87 E-value=90 Score=23.02 Aligned_cols=33 Identities=12% Similarity=0.064 Sum_probs=21.7
Q ss_pred CCeeEEEECCCcc--hHHHHHHHc-------CCceEEEeCch
Q 012083 126 EKITCVIADVTFG--WALQVAAKL-------ELKKASIYTSA 158 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 158 (471)
.+||+||.|.... .+..+++.+ ++|.+.++...
T Consensus 50 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 91 (129)
T 1p6q_A 50 NPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQG 91 (129)
T ss_dssp SCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCCC
Confidence 7899999998765 355555443 46677665543
No 458
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=24.86 E-value=3e+02 Score=22.95 Aligned_cols=70 Identities=10% Similarity=-0.039 Sum_probs=47.1
Q ss_pred eeeeeccCcchhhH----------------hhhcCCceeeccc----ccchhhhHHHHHhhhcceeeecC---CCCC---
Q 012083 364 ACYLTHCGWNSTME----------------GISMGVPFLCWPW----GHDHLYIKSCICDDWKIGLWLEP---DDNG--- 417 (471)
Q Consensus 364 ~~~ItHgG~~s~~e----------------al~~GvP~l~~P~----~~DQ~~na~~v~~~~G~G~~~~~---~~~~--- 417 (471)
..+|.-|-.||+.- +|..++|++++|- ....+.|..++.+ +|+=+.... +...
T Consensus 89 ~mvIaP~TanTlAkiA~GiaDnLlt~aa~~~Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~-~G~~i~~P~~~~~~~~~p~ 167 (201)
T 3lqk_A 89 CMVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGKPVVVGISTNDALGLNGINIMRLMA-TKNIYFIPFGQDNPQVKPN 167 (201)
T ss_dssp EEEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTCCEEEEEEETTTTTTTHHHHHHHHT-STTEEECCEEESCTTTCTT
T ss_pred EEEEccCCHHHHHHHHCcccCcHHHHHHHHHhhcCCCEEEEECCChhHHHhHHHHHHHHH-CCCEEECCCCccccccCCC
Confidence 35778777775532 2557999999995 4567779999999 686443322 0001
Q ss_pred --CcCHhHHHHHHHHHhCc
Q 012083 418 --IIGRHEIKRKVDELLSN 434 (471)
Q Consensus 418 --~~~~~~l~~~i~~ll~~ 434 (471)
..+.+.|.+.+.+.|++
T Consensus 168 s~~a~~~~i~~tv~~al~~ 186 (201)
T 3lqk_A 168 SLVARMEALPETIEAALRG 186 (201)
T ss_dssp CEEECGGGHHHHHHHHHTT
T ss_pred cccCCHHHHHHHHHHHHhc
Confidence 23447899999999876
No 459
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=24.82 E-value=94 Score=25.80 Aligned_cols=36 Identities=14% Similarity=0.061 Sum_probs=28.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
..++++..+..|...-+..+++.|+++|+.|..+-.
T Consensus 28 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 28 APVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp EEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 456666667777777889999999999999877653
No 460
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=24.81 E-value=2.9e+02 Score=22.64 Aligned_cols=134 Identities=8% Similarity=0.006 Sum_probs=70.0
Q ss_pred EEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEe-cc----chhhhhccCc
Q 012083 288 VIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVK-WA----PQEKVLAHPS 362 (471)
Q Consensus 288 vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~-~v----pq~~lL~~~~ 362 (471)
+++.-.||.... ....+++.|.+.+..+-+.+... ....+.....+...++ ..+ |- .+-.+...++
T Consensus 5 IllgvTGs~aa~---k~~~l~~~L~~~g~~V~vv~T~~----A~~fi~~~~l~~l~~~--~~d~~~~~~~~hi~l~~~aD 75 (181)
T 1g63_A 5 LLICATASINVI---NINHYIVELKQHFDEVNILFSPS----SKNFINTDVLKLFCDN--LYDEIKDPLLNHINIVENHE 75 (181)
T ss_dssp EEEEECSCGGGG---GHHHHHHHHTTTSSCEEEEECGG----GGGTSCGGGGGGTSSC--EECTTTCTTCCHHHHHHTCS
T ss_pred EEEEEECHHHHH---HHHHHHHHHHHCCCEEEEEEchh----HHHHHHHHHHHHHhCC--cccccCCCCCccccccccCC
Confidence 666666665443 23456666666677665555433 1223322223334555 332 22 2333333344
Q ss_pred ceeeeeccCcchhhH-------------hhhcCCceeeccccc----ch---hhhHHHHHhhhcceeeecCCC-------
Q 012083 363 VACYLTHCGWNSTME-------------GISMGVPFLCWPWGH----DH---LYIKSCICDDWKIGLWLEPDD------- 415 (471)
Q Consensus 363 ~~~~ItHgG~~s~~e-------------al~~GvP~l~~P~~~----DQ---~~na~~v~~~~G~G~~~~~~~------- 415 (471)
+ .+|--+-.||+.- ++..++|+++.|-.. +. ..|-.++.+ +|+-+.-....
T Consensus 76 ~-~vIaPaTantlAKiA~GiaDnllt~~~la~~~pvvlaPamn~~m~~~p~~~~Nl~~L~~-~G~~iv~p~~g~~f~lac 153 (181)
T 1g63_A 76 Y-ILVLPASANTINKIANGICDNLLTTVCLTGYQKLFIFPNMNIRMWGNPFLQKNIDLLKN-NDVKVYSPDMNKSFEISS 153 (181)
T ss_dssp E-EEEEEECHHHHHHHHTTCCCSHHHHHHHHTGGGEEEEECCCHHHHTCHHHHHHHHHHHT-TTCEECCCEECC------
T ss_pred E-EEEecCCHHHHHHHHccccCcHHHHHHHHcCCCEEEEeCCChhhcCCHHHHHHHHHHHH-CCCEEECCCCCccccccc
Confidence 3 5788888776543 377799999999422 11 347777877 57643322110
Q ss_pred ------CCCcCHhHHHHHHHHHh
Q 012083 416 ------NGIIGRHEIKRKVDELL 432 (471)
Q Consensus 416 ------~~~~~~~~l~~~i~~ll 432 (471)
..-.+.++|.+.+.+.|
T Consensus 154 g~~~g~g~~~~~~~iv~~v~~~l 176 (181)
T 1g63_A 154 GRYKNNITMPNIENVLNFVLNNE 176 (181)
T ss_dssp ----CCEECCCHHHHHHHHHC--
T ss_pred CCccCCcCCCCHHHHHHHHHHHh
Confidence 02335677777766655
No 461
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=24.55 E-value=62 Score=27.68 Aligned_cols=39 Identities=18% Similarity=0.092 Sum_probs=30.7
Q ss_pred cEEEEEc--CCCcccHHHHHHHHHHHHhC-CCeEEEEeCCcc
Q 012083 18 VHVLLVS--FPAQGHVASLMKLAHRLADC-RIKVTFVTTEFI 56 (471)
Q Consensus 18 ~~Il~~~--~~~~GH~~p~~~La~~L~~r-Gh~Vt~~~~~~~ 56 (471)
+|++.+. -++-|=..-...||..|+++ |++|.++-....
T Consensus 4 ~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 4 KRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 4554443 45778999999999999998 999999866544
No 462
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=24.48 E-value=3.5e+02 Score=23.51 Aligned_cols=31 Identities=3% Similarity=-0.111 Sum_probs=20.9
Q ss_pred CCeeEEEECCCcc----hHHHHHHHcCCceEEEeC
Q 012083 126 EKITCVIADVTFG----WALQVAAKLELKKASIYT 156 (471)
Q Consensus 126 ~~pD~vV~D~~~~----~~~~~A~~lgiP~v~~~~ 156 (471)
.++|.||...... .....+...|||+|.+..
T Consensus 60 ~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 94 (305)
T 3g1w_A 60 KNPAGIAISAIDPVELTDTINKAVDAGIPIVLFDS 94 (305)
T ss_dssp HCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESS
T ss_pred hCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEECC
Confidence 5899888765433 233455677999998753
No 463
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=24.44 E-value=1.3e+02 Score=23.10 Aligned_cols=34 Identities=9% Similarity=0.019 Sum_probs=22.3
Q ss_pred CCeeEEEECCCcc--hHHHHHHH-----cCCceEEEeCchH
Q 012083 126 EKITCVIADVTFG--WALQVAAK-----LELKKASIYTSAP 159 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~-----lgiP~v~~~~~~~ 159 (471)
.+||+||+|.... .+..+++. -++|++.++....
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (153)
T 3cz5_A 50 TTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQG 90 (153)
T ss_dssp TCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCCS
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 7899999997654 33333332 3688888876543
No 464
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=24.41 E-value=88 Score=27.54 Aligned_cols=39 Identities=21% Similarity=0.201 Sum_probs=27.2
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|..-+-|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 5 m~~l~gk~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 5 MGRVQDKVVLVTGGARG---QGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CCTTTTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred ccccCCCEEEEeCCCCh---HHHHHHHHHHHCCCeEEEEccc
Confidence 43334467777766553 3457899999999999987643
No 465
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=24.34 E-value=86 Score=25.98 Aligned_cols=36 Identities=14% Similarity=0.124 Sum_probs=25.9
Q ss_pred cEEEEEcCCC--cccHHHHHH-HHHH-HHhCCCeEEEEeC
Q 012083 18 VHVLLVSFPA--QGHVASLMK-LAHR-LADCRIKVTFVTT 53 (471)
Q Consensus 18 ~~Il~~~~~~--~GH~~p~~~-La~~-L~~rGh~Vt~~~~ 53 (471)
|||+++.... .|+..-+.. +++. |.++|++|.++--
T Consensus 3 mkilii~gS~r~~g~t~~la~~i~~~~l~~~g~~v~~~dl 42 (197)
T 2vzf_A 3 YSIVAISGSPSRNSTTAKLAEYALAHVLARSDSQGRHIHV 42 (197)
T ss_dssp EEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSEEEEEEEG
T ss_pred ceEEEEECCCCCCChHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 7898887654 476666655 4566 7888999988754
No 466
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=24.22 E-value=80 Score=26.02 Aligned_cols=36 Identities=11% Similarity=0.100 Sum_probs=24.5
Q ss_pred cEEEEEcCCCc---ccHHHHH-HHHHHHHhCC--CeEEEEeC
Q 012083 18 VHVLLVSFPAQ---GHVASLM-KLAHRLADCR--IKVTFVTT 53 (471)
Q Consensus 18 ~~Il~~~~~~~---GH~~p~~-~La~~L~~rG--h~Vt~~~~ 53 (471)
|||+++....+ |+..-+. .+++.|.++| |+|.++--
T Consensus 2 mkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl 43 (201)
T 1t5b_A 2 SKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDL 43 (201)
T ss_dssp CEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEET
T ss_pred CeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 78877776654 6666555 3566677766 89888754
No 467
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=24.19 E-value=3.3e+02 Score=23.68 Aligned_cols=34 Identities=21% Similarity=0.153 Sum_probs=25.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
.|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 33 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 66 (275)
T 4imr_A 33 GRTALVTGSSRG---IGAAIAEGLAGAGAHVILHGVK 66 (275)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEcCC
Confidence 467777766543 2357899999999999987654
No 468
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=24.17 E-value=71 Score=28.98 Aligned_cols=31 Identities=10% Similarity=-0.018 Sum_probs=22.1
Q ss_pred CCeeEEEECCCcc-hHHHHHHHcCCceEEEeC
Q 012083 126 EKITCVIADVTFG-WALQVAAKLELKKASIYT 156 (471)
Q Consensus 126 ~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~ 156 (471)
.+||+||...... ....--++.|||++.+..
T Consensus 83 l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~ 114 (326)
T 3psh_A 83 LKPDVVFVTNYAPSEMIKQISDVNIPVVAISL 114 (326)
T ss_dssp TCCSEEEEETTCCHHHHHHHHTTTCCEEEECS
T ss_pred cCCCEEEEeCCCChHHHHHHHHcCCCEEEEec
Confidence 6999999875432 234445678999999754
No 469
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=24.15 E-value=47 Score=30.10 Aligned_cols=35 Identities=17% Similarity=0.176 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
++++|+++-.+..| +..|..|+++|++|+++-...
T Consensus 4 ~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 38 (335)
T 2zbw_A 4 DHTDVLIVGAGPTG-----LFAGFYVGMRGLSFRFVDPLP 38 (335)
T ss_dssp CEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESSS
T ss_pred CcCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEeCCC
Confidence 34688888766444 456778888999999997654
No 470
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=24.12 E-value=68 Score=27.85 Aligned_cols=39 Identities=13% Similarity=0.105 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCcccH--HHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 17 NVHVLLVSFPAQGHV--ASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~--~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
+..++++..+..+|- ..+..+|+.|+++|+.|..+-...
T Consensus 55 ~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG 95 (259)
T 4ao6_A 55 SDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPG 95 (259)
T ss_dssp CSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC
T ss_pred CCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCC
Confidence 456778888877773 357889999999999988775543
No 471
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=24.07 E-value=1e+02 Score=20.84 Aligned_cols=48 Identities=19% Similarity=0.304 Sum_probs=34.1
Q ss_pred cCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012083 419 IGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469 (471)
Q Consensus 419 ~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 469 (471)
..++++.+.-...|+|++++..-..=+..|-+. .|-+.+-|++.++..
T Consensus 12 ~~Re~li~~Av~FLqdp~V~~sp~~~K~~FL~s---KGLt~eEI~~Al~ra 59 (70)
T 2w84_A 12 LPREPLIATAVKFLQNSRVRQSPLATRRAFLKK---KGLTDEEIDMAFQQS 59 (70)
T ss_dssp CCCHHHHHHHHHHHCSTTGGGSCHHHHHHHHHH---TTCCHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhCChhhhhCCHHHHHHHHHH---cCCCHHHHHHHHHHc
Confidence 345666666678899998777776666666655 788888888776653
No 472
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=24.06 E-value=3.8e+02 Score=23.77 Aligned_cols=29 Identities=10% Similarity=0.025 Sum_probs=18.9
Q ss_pred eeEEEECCCcch----HHHHHHHcCCceEEEeC
Q 012083 128 ITCVIADVTFGW----ALQVAAKLELKKASIYT 156 (471)
Q Consensus 128 pD~vV~D~~~~~----~~~~A~~lgiP~v~~~~ 156 (471)
+|.||....... ....+...|||+|.+..
T Consensus 64 vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 96 (332)
T 2rjo_A 64 NLVLNVDPNDSADARVIVEACSKAGAYVTTIWN 96 (332)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHTCEEEEESC
T ss_pred CCEEEEeCCCHHHHHHHHHHHHHCCCeEEEECC
Confidence 999887655432 12334567999998743
No 473
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=24.06 E-value=57 Score=28.81 Aligned_cols=31 Identities=19% Similarity=0.118 Sum_probs=24.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
|||+|+..|..| ..+|+.|.+.||+|+++..
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~~ 31 (279)
T 2f1k_A 1 MKIGVVGLGLIG-----ASLAGDLRRRGHYLIGVSR 31 (279)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEcCcHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 489988766555 3578889999999988754
No 474
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=23.82 E-value=57 Score=28.42 Aligned_cols=31 Identities=19% Similarity=-0.039 Sum_probs=21.7
Q ss_pred CCeeEEEECCCcc-hHHHHHHHcCCceEEEeC
Q 012083 126 EKITCVIADVTFG-WALQVAAKLELKKASIYT 156 (471)
Q Consensus 126 ~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~ 156 (471)
.+||+||...... .....-++.|||++.+..
T Consensus 59 l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 59 LKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp TCCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred cCCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 7999999865332 233455678999998754
No 475
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=23.80 E-value=88 Score=26.72 Aligned_cols=36 Identities=22% Similarity=0.257 Sum_probs=21.8
Q ss_pred cEEEEEcCCC-----cccHHH-HH-HHHHHHHhCCCeEEEEeC
Q 012083 18 VHVLLVSFPA-----QGHVAS-LM-KLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 18 ~~Il~~~~~~-----~GH~~p-~~-~La~~L~~rGh~Vt~~~~ 53 (471)
|||+++...- .+-++- ++ .+++.|.+.||+|.++-.
T Consensus 26 ~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL 68 (218)
T 3rpe_A 26 SNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTV 68 (218)
T ss_dssp CCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred cceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEEC
Confidence 7887776333 223333 22 455666678999998654
No 476
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=23.79 E-value=82 Score=29.07 Aligned_cols=34 Identities=6% Similarity=-0.200 Sum_probs=26.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
+||+++..+ .-...++++|++.||+|.++.....
T Consensus 2 ~~Ililg~g-----~~~~~~~~a~~~~G~~v~~~~~~~~ 35 (365)
T 2z04_A 2 LTVGILGGG-----QLGWMTILEGRKLGFKFHVLEDKEN 35 (365)
T ss_dssp CEEEEECCS-----HHHHHHHHHHGGGTCEEEEECSSSS
T ss_pred CEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 689888643 3467789999999999998876543
No 477
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=23.75 E-value=62 Score=28.81 Aligned_cols=32 Identities=19% Similarity=0.137 Sum_probs=25.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
+||.|+-.|..| ..+|..|+++||+|+++...
T Consensus 5 ~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 689999666555 46889999999999987543
No 478
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=23.65 E-value=54 Score=29.07 Aligned_cols=31 Identities=23% Similarity=0.260 Sum_probs=24.8
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|||+|+-.|..|. .+|+.|.+ ||+|+++...
T Consensus 2 ~~i~iiG~G~~G~-----~~a~~l~~-g~~V~~~~~~ 32 (289)
T 2cvz_A 2 EKVAFIGLGAMGY-----PMAGHLAR-RFPTLVWNRT 32 (289)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHT-TSCEEEECSS
T ss_pred CeEEEEcccHHHH-----HHHHHHhC-CCeEEEEeCC
Confidence 7899998887775 46788888 9999887543
No 479
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=23.58 E-value=99 Score=26.16 Aligned_cols=33 Identities=12% Similarity=0.082 Sum_probs=22.7
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|.++++.+ .|-+ -..+++.|.++||+|+++...
T Consensus 6 k~vlVtGa-sggi--G~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 6 GAVLITGA-SRGI--GEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp CEEEESST-TSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC-CcHH--HHHHHHHHHHCCCEEEEEECC
Confidence 44455533 3433 357899999999999988764
No 480
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=23.55 E-value=1.2e+02 Score=22.82 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=23.8
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT 53 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~ 53 (471)
|.++++||+++- .+-.-...|.+.|.+.|++|..+..
T Consensus 1 M~~~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 37 (140)
T 3h5i_A 1 MSLKDKKILIVE----DSKFQAKTIANILNKYGYTVEIALT 37 (140)
T ss_dssp -----CEEEEEC----SCHHHHHHHHHHHHHTTCEEEEESS
T ss_pred CCCCCcEEEEEe----CCHHHHHHHHHHHHHcCCEEEEecC
Confidence 445667888885 4556667788888888998876543
No 481
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=23.53 E-value=46 Score=31.19 Aligned_cols=33 Identities=24% Similarity=0.239 Sum_probs=26.7
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
.++|+++-.+..| +.+|..|+++|++|+++-..
T Consensus 6 ~~dVvIVGaG~aG-----l~~A~~L~~~G~~V~viE~~ 38 (399)
T 2x3n_A 6 HIDVLINGCGIGG-----AMLAYLLGRQGHRVVVVEQA 38 (399)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECcCHHH-----HHHHHHHHhCCCcEEEEeCC
Confidence 4689998877655 67888999999999998654
No 482
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=23.47 E-value=63 Score=30.45 Aligned_cols=58 Identities=22% Similarity=0.346 Sum_probs=36.5
Q ss_pred hhhhccCcceeeeeccCcchhhHhhhc----CC-ceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHH
Q 012083 355 EKVLAHPSVACYLTHCGWNSTMEGISM----GV-PFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVD 429 (471)
Q Consensus 355 ~~lL~~~~~~~~ItHgG~~s~~eal~~----Gv-P~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~ 429 (471)
..+-..++ ++|+=||-||++.+.+. ++ |++.+... . +|.=. .+..+++.++++
T Consensus 109 ~~~~~~~D--lVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G-----------~-lGFLt--------~~~~~~~~~al~ 166 (388)
T 3afo_A 109 QDIVNRTD--LLVTLGGDGTILHGVSMFGNTQVPPVLAFALG-----------T-LGFLS--------PFDFKEHKKVFQ 166 (388)
T ss_dssp HHHHHHCS--EEEEEESHHHHHHHHHTTTTSCCCCEEEEECS-----------S-CCSSC--------CEEGGGHHHHHH
T ss_pred hhcccCCC--EEEEEeCcHHHHHHHHHhcccCCCeEEEEECC-----------C-cccCC--------cCChHHHHHHHH
Confidence 34443344 49999999999999654 67 78888521 1 22211 134467777777
Q ss_pred HHhCc
Q 012083 430 ELLSN 434 (471)
Q Consensus 430 ~ll~~ 434 (471)
+++++
T Consensus 167 ~il~g 171 (388)
T 3afo_A 167 EVISS 171 (388)
T ss_dssp HHHTT
T ss_pred HHhcC
Confidence 77754
No 483
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=23.47 E-value=82 Score=28.48 Aligned_cols=35 Identities=17% Similarity=0.085 Sum_probs=24.3
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
.|+|++. |+.|.+- ..|++.|.++||+|+.+....
T Consensus 3 ~~~vlVt--GatG~iG--~~l~~~L~~~G~~V~~~~r~~ 37 (345)
T 2z1m_A 3 GKRALIT--GIRGQDG--AYLAKLLLEKGYEVYGADRRS 37 (345)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEECSCC
T ss_pred CCEEEEE--CCCChHH--HHHHHHHHHCCCEEEEEECCC
Confidence 3576655 4445443 567899999999999886543
No 484
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=23.41 E-value=88 Score=26.38 Aligned_cols=33 Identities=12% Similarity=0.137 Sum_probs=24.6
Q ss_pred CCeeEEEE-CCCcc-hHHHHHHHcCCceEEEeCch
Q 012083 126 EKITCVIA-DVTFG-WALQVAAKLELKKASIYTSA 158 (471)
Q Consensus 126 ~~pD~vV~-D~~~~-~~~~~A~~lgiP~v~~~~~~ 158 (471)
..||++|+ |...- .+..=|.++|||.|.++.+.
T Consensus 110 ~~Pdllvv~Dp~~d~~ai~EA~~l~IP~Ial~DTn 144 (202)
T 3j20_B 110 FEPDVLIVTDPRADHQAMREAVEIGIPIVALVDTE 144 (202)
T ss_dssp CCCSEEEESCTTTSHHHHHHHHHHTCCEEEEECTT
T ss_pred cCCCeEEEeCCccchHHHHHHHHcCCCEEEEEcCC
Confidence 57888764 54433 67788999999999987654
No 485
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=23.40 E-value=92 Score=26.13 Aligned_cols=33 Identities=6% Similarity=0.027 Sum_probs=27.3
Q ss_pred EEEEEcC-CCcccHHHHHHHHHHHHhCCCeEEEE
Q 012083 19 HVLLVSF-PAQGHVASLMKLAHRLADCRIKVTFV 51 (471)
Q Consensus 19 ~Il~~~~-~~~GH~~p~~~La~~L~~rGh~Vt~~ 51 (471)
.|++... ++-|=..-.+.||..|+++|++|.++
T Consensus 3 ~I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 3 RYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 3445443 67899999999999999999999986
No 486
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=23.39 E-value=94 Score=23.29 Aligned_cols=34 Identities=18% Similarity=0.146 Sum_probs=22.7
Q ss_pred CCeeEEEECCCcc---hHHHHHHH----cCCceEEEeCchH
Q 012083 126 EKITCVIADVTFG---WALQVAAK----LELKKASIYTSAP 159 (471)
Q Consensus 126 ~~pD~vV~D~~~~---~~~~~A~~----lgiP~v~~~~~~~ 159 (471)
.+||+||.|.... .+..+++. .++|+|.++....
T Consensus 53 ~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~ 93 (140)
T 3cg0_A 53 LRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQD 93 (140)
T ss_dssp HCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred CCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCC
Confidence 6899999997543 33333333 4799998876543
No 487
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=23.36 E-value=67 Score=27.46 Aligned_cols=45 Identities=11% Similarity=-0.031 Sum_probs=28.8
Q ss_pred cEEEeccchh-hhhccCcceeeeeccCcchhhHhh---------hcCCceeeccc
Q 012083 346 GKMVKWAPQE-KVLAHPSVACYLTHCGWNSTMEGI---------SMGVPFLCWPW 390 (471)
Q Consensus 346 v~~~~~vpq~-~lL~~~~~~~~ItHgG~~s~~eal---------~~GvP~l~~P~ 390 (471)
..++...+.. .++..-+-..++--||.||.-|.. .+++|++.+-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 3344545533 333222334578899999988775 47999998863
No 488
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=23.29 E-value=93 Score=25.15 Aligned_cols=28 Identities=21% Similarity=0.124 Sum_probs=23.0
Q ss_pred EEEEecCccccCCHHHHHHHHHHHHhCC
Q 012083 288 VIYAAFGSISKLSQQQFNELALGLELAG 315 (471)
Q Consensus 288 vv~vs~GS~~~~~~~~~~~~~~al~~~~ 315 (471)
.+|+++||......+.+...+.+|.+..
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~~ 33 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEYD 33 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 7999999987767777888888888754
No 489
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=23.25 E-value=42 Score=32.74 Aligned_cols=34 Identities=15% Similarity=0.235 Sum_probs=27.5
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
+|++|.|+-.+..| .++|..|+++||+|++....
T Consensus 14 ~~~~IgvIGlG~MG-----~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 14 SKQQIGVVGMAVMG-----RNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp -CBSEEEECCSHHH-----HHHHHHHHTTTCCEEEECSS
T ss_pred CCCeEEEEccHHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 67899999888776 46899999999999987653
No 490
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=23.25 E-value=86 Score=28.50 Aligned_cols=74 Identities=14% Similarity=0.265 Sum_probs=45.7
Q ss_pred cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhc-cCcceeeeeccCcchhh
Q 012083 298 KLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLA-HPSVACYLTHCGWNSTM 376 (471)
Q Consensus 298 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~-~~~~~~~ItHgG~~s~~ 376 (471)
..+.+....+.+++.....+.||.+.+.- +-.++.+++....+-+ +|+. ||-+.-....+
T Consensus 63 gtd~~Ra~dL~~a~~Dp~i~aI~~~rGGy-----------------ga~rlLp~LD~~~i~~a~PK~--~iGySDiTaL~ 123 (311)
T 1zl0_A 63 GTVEQRLEDLHNAFDMPDITAVWCLRGGY-----------------GCGQLLPGLDWGRLQAASPRP--LIGFSDISVLL 123 (311)
T ss_dssp SCHHHHHHHHHHHHHSTTEEEEEESCCSS-----------------CGGGGTTTCCHHHHHHSCCCC--EEECGGGHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEccCCc-----------------CHHHHhhccchhhhhccCCCE--EEEEchhHHHH
Confidence 34566677788888888888888887651 1112334444444544 5666 77666666666
Q ss_pred Hhhh-cCCceeeccc
Q 012083 377 EGIS-MGVPFLCWPW 390 (471)
Q Consensus 377 eal~-~GvP~l~~P~ 390 (471)
-+++ .|++.+-=|.
T Consensus 124 ~al~~~G~~t~hGp~ 138 (311)
T 1zl0_A 124 SAFHRHGLPAIHGPV 138 (311)
T ss_dssp HHHHHTTCCEEECCC
T ss_pred HHHHHcCCcEEECHh
Confidence 6665 3666655554
No 491
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=23.24 E-value=80 Score=27.03 Aligned_cols=34 Identities=9% Similarity=-0.111 Sum_probs=23.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
.|.++++.++.| --.++++.|+++|++|.++...
T Consensus 7 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 7 ARRVLVYGGRGA---LGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeCC
Confidence 355566644432 3457899999999999987653
No 492
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=23.20 E-value=48 Score=30.65 Aligned_cols=36 Identities=17% Similarity=0.271 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCc
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADC-RIKVTFVTTEF 55 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~r-Gh~Vt~~~~~~ 55 (471)
+.|+|+++ |+.|.+- ..|+++|.++ ||+|+.+.-..
T Consensus 23 ~~~~vlVt--GatG~iG--~~l~~~L~~~~g~~V~~~~r~~ 59 (372)
T 3slg_A 23 KAKKVLIL--GVNGFIG--HHLSKRILETTDWEVFGMDMQT 59 (372)
T ss_dssp CCCEEEEE--SCSSHHH--HHHHHHHHHHSSCEEEEEESCC
T ss_pred CCCEEEEE--CCCChHH--HHHHHHHHhCCCCEEEEEeCCh
Confidence 34677665 4455544 4678899988 99999987643
No 493
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=23.16 E-value=54 Score=30.23 Aligned_cols=31 Identities=6% Similarity=-0.092 Sum_probs=21.6
Q ss_pred CCeeEEEECCCcc-hHHHHHHHcCCceEEEeC
Q 012083 126 EKITCVIADVTFG-WALQVAAKLELKKASIYT 156 (471)
Q Consensus 126 ~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~ 156 (471)
.+||+||...... ....+.+.+|||++.+..
T Consensus 95 l~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 95 LQPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp HCCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CCCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 5999999865422 223355778999999753
No 494
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=23.14 E-value=39 Score=26.32 Aligned_cols=63 Identities=14% Similarity=0.085 Sum_probs=37.1
Q ss_pred cCCceeecccccchhhhHHHHHhhhc-ceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHH
Q 012083 381 MGVPFLCWPWGHDHLYIKSCICDDWK-IGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQ 449 (471)
Q Consensus 381 ~GvP~l~~P~~~DQ~~na~~v~~~~G-~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~ 449 (471)
..+|++++--..+. .......+ .| +--.+. ..++.++|.++|+.++....++++.+++.+.++
T Consensus 78 ~~~~ii~ls~~~~~-~~~~~~~~-~g~~~~~l~----kP~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~ 141 (154)
T 2rjn_A 78 PDIERVVISGYADA-QATIDAVN-RGKISRFLL----KPWEDEDVFKVVEKGLQLAFLREENLRLQEETE 141 (154)
T ss_dssp TTSEEEEEECGGGH-HHHHHHHH-TTCCSEEEE----SSCCHHHHHHHHHHHHHHHHHHHHTTSCCC---
T ss_pred CCCcEEEEecCCCH-HHHHHHHh-ccchheeee----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788777544442 23333344 35 544554 458999999999999976655555444444443
No 495
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=23.08 E-value=1.3e+02 Score=24.32 Aligned_cols=43 Identities=7% Similarity=0.038 Sum_probs=31.4
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCC--CeEEEEeCCcchhhh
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCR--IKVTFVTTEFICERI 60 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rG--h~Vt~~~~~~~~~~~ 60 (471)
+++|.+++ ++.+++--+-..+..|.+-| |+|.+++....-+.+
T Consensus 3 ~~~V~Iim-gs~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~ 47 (163)
T 3ors_A 3 AMKVAVIM-GSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMM 47 (163)
T ss_dssp CCCEEEEE-SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHH
T ss_pred CCeEEEEE-CcHHHHHHHHHHHHHHHHcCCCEEEEEECCcCCHHHH
Confidence 35787776 88899999999999998877 666666654444433
No 496
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major}
Probab=23.07 E-value=34 Score=34.19 Aligned_cols=52 Identities=17% Similarity=-0.047 Sum_probs=25.3
Q ss_pred ccccccccccccCCCCcEEEEEcCC-------CcccHHHHH---HHHHHHHhCCCeEEEEeCCcc
Q 012083 2 EFRYFASESESLNKTNVHVLLVSFP-------AQGHVASLM---KLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 2 ~~~~~~~~~~~m~~~~~~Il~~~~~-------~~GH~~p~~---~La~~L~~rGh~Vt~~~~~~~ 56 (471)
|-|++++.+..- +.++.+.+.+ --||+...+ .+|+-|+.+||+|.+++.-..
T Consensus 13 ~~~~~~~~~~~~---~~~~~i~~~~py~ng~lHiGH~r~~v~~D~laR~~r~~G~~V~~~~g~dd 74 (564)
T 3kfl_A 13 EAQTQGPGSMKK---QKVFFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDE 74 (564)
T ss_dssp -----------C---CCCEEEEEEEEECSSCCCHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEC
T ss_pred hhhhcCCccccC---CCCEEEeCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCcEEEecCcCC
Confidence 556676655431 2344333221 248887655 367777778999999877543
No 497
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=22.85 E-value=1.1e+02 Score=28.43 Aligned_cols=33 Identities=3% Similarity=-0.135 Sum_probs=25.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
+||+++..+ .....++++|.+.||+|.++....
T Consensus 2 ~~Ililg~g-----~~g~~~~~a~~~~G~~v~~~~~~~ 34 (380)
T 3ax6_A 2 KKIGIIGGG-----QLGKMMTLEAKKMGFYVIVLDPTP 34 (380)
T ss_dssp CEEEEECCS-----HHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 689998754 235677888999999999887654
No 498
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=22.82 E-value=84 Score=27.66 Aligned_cols=39 Identities=21% Similarity=0.209 Sum_probs=25.6
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|.....|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 23 m~~~~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 61 (272)
T 4dyv_A 23 MSKTGKKIAIVTGAGSG---VGRAVAVALAGAGYGVALAGRR 61 (272)
T ss_dssp -----CCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred hcCCCCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEECC
Confidence 43334577888866543 2357899999999999887654
No 499
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=22.79 E-value=81 Score=28.05 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
+.|+++++.++.| --.++|+.|+++|++|.+++-..
T Consensus 11 ~~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~~ 46 (311)
T 3o26_A 11 KRRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRDV 46 (311)
T ss_dssp -CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 4577778766654 23578999999999999887654
No 500
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=22.70 E-value=87 Score=26.98 Aligned_cols=36 Identities=11% Similarity=0.213 Sum_probs=25.3
Q ss_pred cEEEEEcCCCc--ccHHHHHH-HHHHHHhC-CCeEEEEeC
Q 012083 18 VHVLLVSFPAQ--GHVASLMK-LAHRLADC-RIKVTFVTT 53 (471)
Q Consensus 18 ~~Il~~~~~~~--GH~~p~~~-La~~L~~r-Gh~Vt~~~~ 53 (471)
|||+++..... |+..-+.. +++.|.++ |++|.++..
T Consensus 2 mkIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v~~~dl 41 (242)
T 1sqs_A 2 NKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTP 41 (242)
T ss_dssp CEEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEEEEECT
T ss_pred CeEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 79988876654 66666554 56677777 999988743
Done!