Query 012089
Match_columns 471
No_of_seqs 384 out of 2367
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 21:24:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012089.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012089hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 1.9E-27 6.7E-32 231.1 21.9 177 259-471 14-203 (284)
2 1dqv_A Synaptotagmin III; beta 99.9 2.1E-26 7.3E-31 225.2 17.8 177 258-471 14-205 (296)
3 2dmh_A Myoferlin; beta-sandwic 99.9 3.8E-21 1.3E-25 166.5 16.5 128 261-395 4-134 (140)
4 1wfj_A Putative elicitor-respo 99.9 1.8E-21 6.1E-26 167.7 14.0 127 258-396 4-132 (136)
5 3b7y_A E3 ubiquitin-protein li 99.9 8.3E-21 2.8E-25 167.0 14.7 129 260-394 16-153 (153)
6 1rlw_A Phospholipase A2, CALB 99.8 1.2E-20 4.2E-25 160.2 14.1 121 263-394 2-125 (126)
7 2fk9_A Protein kinase C, ETA t 99.8 6.9E-21 2.3E-25 167.4 11.9 119 259-393 24-156 (157)
8 2ep6_A MCTP2 protein; beta san 99.8 1E-20 3.5E-25 162.4 12.3 126 258-394 7-132 (133)
9 1gmi_A Protein kinase C, epsil 99.8 2.1E-20 7.2E-25 161.1 13.5 117 262-394 4-133 (136)
10 3kwu_A MUNC13-1; calcium bindi 99.8 8.4E-20 2.9E-24 159.6 17.3 123 260-393 13-146 (148)
11 3m7f_B E3 ubiquitin-protein li 99.8 4.8E-20 1.6E-24 166.1 15.7 130 260-395 4-142 (176)
12 3pyc_A E3 ubiquitin-protein li 99.8 3.5E-19 1.2E-23 152.5 15.2 125 262-392 3-131 (132)
13 2z0u_A WW domain-containing pr 99.8 1E-19 3.5E-24 160.2 9.6 111 259-369 38-154 (155)
14 2nq3_A Itchy homolog E3 ubiqui 99.8 5.8E-19 2E-23 158.3 13.1 126 260-395 32-162 (173)
15 3f04_A Synaptotagmin-1; C2A, c 99.8 5.4E-19 1.8E-23 153.5 12.5 112 259-370 29-142 (143)
16 2d8k_A Synaptotagmin VII; exoc 99.8 4E-19 1.4E-23 154.0 11.5 112 259-370 21-135 (141)
17 1rsy_A Synaptotagmin I; calciu 99.8 7.1E-19 2.4E-23 154.5 12.9 112 259-370 37-150 (152)
18 2b3r_A Phosphatidylinositol-4- 99.8 1.1E-18 3.8E-23 149.9 13.1 111 259-370 15-130 (134)
19 1ugk_A Synaptotagmin IV, KIAA1 99.8 2.5E-18 8.7E-23 148.3 13.2 112 259-370 17-133 (138)
20 1wfm_A Synaptotagmin XIII; C2 99.8 4.4E-18 1.5E-22 146.9 12.0 109 259-370 21-132 (138)
21 2chd_A Rabphilin-3A, exophilin 99.8 3.5E-18 1.2E-22 148.2 11.2 112 259-370 24-140 (142)
22 2bwq_A Regulating synaptic mem 99.8 3.8E-18 1.3E-22 145.3 11.1 109 259-368 13-128 (129)
23 3fdw_A Synaptotagmin-like prot 99.8 1.9E-18 6.6E-23 150.9 9.1 113 259-371 18-135 (148)
24 2enp_A B/K protein; C2 type 1, 99.7 1.9E-18 6.5E-23 150.8 9.0 112 259-370 21-141 (147)
25 2dmg_A KIAA1228 protein; beta- 99.7 3.4E-18 1.2E-22 148.2 9.4 111 259-370 19-135 (142)
26 1a25_A CALB, protein kinase C 99.7 1.1E-17 3.9E-22 146.2 12.6 107 263-370 30-139 (149)
27 3nsj_A Perforin-1; pore formin 99.7 5.1E-17 1.7E-21 169.4 19.6 177 195-393 304-503 (540)
28 3rdl_A Protein kinase C alpha 99.7 8.1E-18 2.8E-22 144.8 11.0 108 262-370 14-124 (137)
29 1rh8_A Piccolo protein; beta-s 99.7 2.5E-18 8.4E-23 149.1 7.6 108 263-370 17-138 (142)
30 1v27_A Regulating synaptic mem 99.7 6.2E-18 2.1E-22 146.3 10.0 111 259-370 16-133 (141)
31 2q3x_A Regulating synaptic mem 99.7 8.9E-18 3E-22 150.4 10.8 109 262-371 28-140 (171)
32 3fbk_A RGS3, RGP3, regulator o 99.7 2E-17 6.8E-22 145.4 11.8 112 258-370 21-137 (153)
33 1tjx_A Similar to synaptotagmi 99.7 4.8E-17 1.6E-21 143.8 13.0 112 259-370 20-147 (159)
34 3n5a_A Synaptotagmin-7; calciu 99.7 3.1E-17 1.1E-21 141.2 11.1 99 259-357 11-113 (138)
35 2cm5_A Rabphilin-3A; protein t 99.7 8.9E-17 3E-21 143.2 13.5 99 258-356 31-133 (166)
36 2cjt_A UNC-13 homolog A, MUNC1 99.7 1.9E-16 6.4E-21 135.3 13.3 118 262-392 3-130 (131)
37 1w15_A Synaptotagmin IV; metal 99.7 7.5E-17 2.6E-21 141.6 10.1 97 259-355 25-125 (153)
38 3l9b_A Otoferlin; C2-domain, b 99.7 2.3E-16 8E-21 133.3 12.0 119 263-395 20-141 (144)
39 3jzy_A Intersectin 2; C2 domai 99.7 2.7E-16 9.3E-21 165.0 12.5 121 260-393 383-507 (510)
40 2cjs_A UNC-13 homolog A, MUNC1 99.6 2.5E-15 8.4E-20 133.6 11.2 89 261-359 11-100 (167)
41 1cjy_A CPLA2, protein (cytosol 99.6 2.4E-15 8.1E-20 161.6 10.4 109 261-370 15-126 (749)
42 2r83_A Synaptotagmin-1; C2A-C2 99.5 3.4E-14 1.1E-18 137.5 13.8 110 261-370 147-272 (284)
43 1djx_A PLC-D1, phosphoinositid 99.5 4.7E-14 1.6E-18 150.2 14.8 124 262-393 495-623 (624)
44 1dqv_A Synaptotagmin III; beta 99.5 1.8E-14 6E-19 140.5 3.9 99 259-357 147-249 (296)
45 3bxj_A RAS GTPase-activating p 99.4 1.4E-14 4.9E-19 150.3 0.1 128 261-396 8-159 (483)
46 3pfq_A PKC-B, PKC-beta, protei 99.3 6.3E-12 2.1E-16 136.0 9.6 108 262-370 170-280 (674)
47 3ohm_B 1-phosphatidylinositol- 99.2 8.9E-11 3E-15 128.2 12.7 119 263-397 724-848 (885)
48 2zkm_X 1-phosphatidylinositol- 99.2 1.2E-10 4E-15 127.1 12.8 115 262-392 676-797 (799)
49 3qr0_A Phospholipase C-beta (P 99.2 2.1E-10 7.1E-15 124.6 13.8 118 263-396 649-773 (816)
50 1yrk_A NPKC-delta, protein kin 99.1 2.4E-09 8.3E-14 87.8 12.8 111 263-393 5-124 (126)
51 2enj_A NPKC-theta, protein kin 99.0 3.9E-09 1.3E-13 87.7 10.9 115 262-394 8-130 (138)
52 2enp_A B/K protein; C2 type 1, 98.8 9.5E-09 3.2E-13 88.9 9.3 60 380-471 9-84 (147)
53 1v27_A Regulating synaptic mem 98.8 5.3E-09 1.8E-13 89.6 6.9 60 380-471 4-74 (141)
54 2bwq_A Regulating synaptic mem 98.8 6.1E-09 2.1E-13 87.9 6.8 58 382-471 3-71 (129)
55 2d8k_A Synaptotagmin VII; exoc 98.8 1.4E-08 4.9E-13 87.1 8.7 60 380-471 9-77 (141)
56 2chd_A Rabphilin-3A, exophilin 98.8 8.8E-09 3E-13 88.5 7.2 60 380-471 12-82 (142)
57 1tjx_A Similar to synaptotagmi 98.8 9.7E-09 3.3E-13 90.1 7.3 60 380-471 8-78 (159)
58 1ugk_A Synaptotagmin IV, KIAA1 98.8 1.2E-08 4E-13 87.3 7.4 60 380-471 5-74 (138)
59 2cm5_A Rabphilin-3A; protein t 98.8 1.4E-08 4.8E-13 89.8 8.0 60 380-471 20-90 (166)
60 2dmg_A KIAA1228 protein; beta- 98.8 1.5E-08 5.1E-13 87.0 7.8 59 380-471 7-76 (142)
61 2z0u_A WW domain-containing pr 98.7 6.7E-09 2.3E-13 90.8 5.3 60 380-471 26-97 (155)
62 3n5a_A Synaptotagmin-7; calciu 98.7 1.2E-08 4E-13 87.0 6.4 57 383-471 2-69 (138)
63 3fbk_A RGS3, RGP3, regulator o 98.7 1.3E-08 4.6E-13 88.6 6.4 61 379-471 9-79 (153)
64 3fdw_A Synaptotagmin-like prot 98.7 1.7E-08 5.7E-13 87.5 6.9 60 380-471 6-77 (148)
65 1wfm_A Synaptotagmin XIII; C2 98.7 3.3E-08 1.1E-12 84.6 8.5 60 380-471 9-75 (138)
66 1rsy_A Synaptotagmin I; calciu 98.7 2.1E-08 7.1E-13 87.3 7.3 60 380-471 25-93 (152)
67 3f04_A Synaptotagmin-1; C2A, c 98.7 2.7E-08 9.1E-13 85.5 7.0 60 380-471 17-85 (143)
68 1w15_A Synaptotagmin IV; metal 98.7 2.5E-08 8.6E-13 86.8 6.8 60 380-471 13-83 (153)
69 3rdl_A Protein kinase C alpha 98.6 7.9E-08 2.7E-12 81.8 7.3 44 428-471 15-69 (137)
70 1rh8_A Piccolo protein; beta-s 98.6 4.1E-08 1.4E-12 84.2 4.5 58 380-471 3-80 (142)
71 1a25_A CALB, protein kinase C 98.5 1.6E-07 5.4E-12 81.3 7.2 58 380-471 16-84 (149)
72 2fk9_A Protein kinase C, ETA t 98.5 2.3E-07 7.9E-12 81.0 6.6 46 426-471 26-88 (157)
73 2ep6_A MCTP2 protein; beta san 98.5 3.2E-07 1.1E-11 77.7 7.4 45 427-471 11-61 (133)
74 2q3x_A Regulating synaptic mem 98.4 2.3E-07 8E-12 82.3 6.3 58 380-471 15-84 (171)
75 3kwu_A MUNC13-1; calcium bindi 98.4 3.5E-07 1.2E-11 78.9 5.9 46 426-471 14-65 (148)
76 1rlw_A Phospholipase A2, CALB 98.4 2.8E-07 9.7E-12 77.1 5.0 44 428-471 2-57 (126)
77 2dmh_A Myoferlin; beta-sandwic 98.3 4E-07 1.4E-11 77.7 5.5 45 427-471 5-54 (140)
78 2b3r_A Phosphatidylinositol-4- 98.3 5.4E-07 1.8E-11 76.5 6.3 45 427-471 18-72 (134)
79 1wfj_A Putative elicitor-respo 98.2 7.6E-07 2.6E-11 75.5 5.0 45 427-471 8-59 (136)
80 1gmi_A Protein kinase C, epsil 98.2 7.3E-07 2.5E-11 75.8 4.4 45 427-471 4-66 (136)
81 3pyc_A E3 ubiquitin-protein li 98.2 1.4E-06 4.8E-11 73.6 5.9 45 427-471 3-55 (132)
82 3b7y_A E3 ubiquitin-protein li 98.2 2.2E-06 7.7E-11 74.2 6.4 45 427-471 18-74 (153)
83 2nq3_A Itchy homolog E3 ubiqui 98.2 1.9E-06 6.6E-11 76.5 5.7 45 427-471 34-84 (173)
84 2cjt_A UNC-13 homolog A, MUNC1 98.1 1E-06 3.5E-11 74.5 2.5 44 427-471 3-49 (131)
85 3nsj_A Perforin-1; pore formin 97.9 1.7E-05 5.8E-10 82.7 6.8 45 427-471 392-441 (540)
86 2cjs_A UNC-13 homolog A, MUNC1 97.7 2E-05 6.7E-10 69.5 3.8 45 427-471 12-58 (167)
87 3jzy_A Intersectin 2; C2 domai 97.6 5.2E-05 1.8E-09 78.9 5.8 45 427-471 385-435 (510)
88 3l9b_A Otoferlin; C2-domain, b 97.5 5.1E-05 1.7E-09 64.1 3.2 41 429-471 21-65 (144)
89 1cjy_A CPLA2, protein (cytosol 97.2 0.00017 5.7E-09 77.7 4.5 45 427-471 16-72 (749)
90 1djx_A PLC-D1, phosphoinositid 97.2 0.00034 1.2E-08 74.4 5.9 45 427-471 495-553 (624)
91 3pfq_A PKC-B, PKC-beta, protei 97.0 0.00095 3.3E-08 71.9 8.0 44 428-471 171-225 (674)
92 3qr0_A Phospholipase C-beta (P 96.9 0.0012 4E-08 72.0 6.5 44 427-471 648-702 (816)
93 2zkm_X 1-phosphatidylinositol- 96.6 0.0022 7.6E-08 69.9 6.1 44 427-471 676-730 (799)
94 3ohm_B 1-phosphatidylinositol- 96.5 0.0021 7.1E-08 70.4 5.6 43 428-471 724-776 (885)
95 3l4c_A Dedicator of cytokinesi 93.6 1.1 3.7E-05 40.4 12.7 57 299-355 77-139 (220)
96 2yrb_A Protein fantom; beta sa 91.2 3.2 0.00011 35.3 11.9 128 259-395 13-151 (156)
97 1yrk_A NPKC-delta, protein kin 90.5 0.57 1.9E-05 38.2 6.2 45 427-471 4-59 (126)
98 2enj_A NPKC-theta, protein kin 90.2 0.35 1.2E-05 40.1 4.9 45 427-471 8-64 (138)
99 2wxf_A Phosphatidylinositol-4, 90.0 1.4 4.8E-05 48.6 10.9 92 263-357 216-325 (940)
100 3hhm_A Phosphatidylinositol-4, 89.4 1.8 6.3E-05 48.2 11.2 93 263-357 354-456 (1091)
101 1e7u_A Phosphatidylinositol 3- 84.3 3.7 0.00013 45.4 10.1 93 264-357 218-331 (961)
102 2y3a_A Phosphatidylinositol-4, 76.3 3.3 0.00011 46.4 6.3 73 263-338 352-430 (1092)
103 2l2t_A Receptor tyrosine-prote 49.8 3.6 0.00012 26.9 0.1 15 23-37 25-39 (44)
104 2jwa_A Receptor tyrosine-prote 48.9 2.4 8.3E-05 27.6 -0.8 24 13-36 16-39 (44)
105 2ks1_B Epidermal growth factor 46.4 4.5 0.00015 26.4 0.2 14 23-36 26-39 (44)
106 1iij_A ERBB-2 receptor protein 28.8 6.6 0.00023 24.2 -1.1 24 12-35 11-34 (35)
107 1ewf_A BPI, bactericidal/perme 25.2 4.9E+02 0.017 25.4 13.1 20 167-186 103-122 (456)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.95 E-value=1.9e-27 Score=231.14 Aligned_cols=177 Identities=31% Similarity=0.454 Sum_probs=150.7
Q ss_pred ccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCccccceeeeeecCCCCCeEeeEEEEEeecC--CCCeEEEEEEE
Q 012089 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVFD 336 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~~L~v~v~d 336 (471)
+....|.|+|+|++|++|+.+|..|.+||||+++++++....++|+++++++||.|||+|.|.+... ....|.|+|||
T Consensus 14 y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d 93 (284)
T 2r83_A 14 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYD 93 (284)
T ss_dssp EETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEE
Confidence 5567799999999999999999999999999999987654567899999999999999999998643 35799999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEEeccCCcccccccccccccCCCCC
Q 012089 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGN 416 (471)
Q Consensus 337 ~d~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~ 416 (471)
+|.+++|++||++.++|.++..+.....|++|..... ......|+|++.+.|.|
T Consensus 94 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~----~~~~~~G~i~l~l~~~p---------------------- 147 (284)
T 2r83_A 94 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEK----EEQEKLGDICFSLRYVP---------------------- 147 (284)
T ss_dssp CCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSS----CCCCCCCEEEEEEEEET----------------------
T ss_pred CCCCCCCceeEEEEEcchhcccCCcceeEEEeecccc----ccccccccEEEEEEecC----------------------
Confidence 9999999999999999999998888888998865321 12346799999999987
Q ss_pred CCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEcC--e---eeeeC---CCCCCcCC
Q 012089 417 DQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYKG--D---KKRTK---KNSRPCLE 471 (471)
Q Consensus 417 ~~~~~~~~~~~~g~L~V~v~~Ak~L~~---~~~~dpyv~v~~~~--~---~~kTk---~t~nP~Wn 471 (471)
..+.|.|.|++|+||+. .+.+||||++++.+ . ++||+ +|.||+||
T Consensus 148 ----------~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wn 203 (284)
T 2r83_A 148 ----------TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYN 203 (284)
T ss_dssp ----------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEE
T ss_pred ----------cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEc
Confidence 46799999999999986 36799999999853 2 33776 88999997
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.94 E-value=2.1e-26 Score=225.21 Aligned_cols=177 Identities=28% Similarity=0.446 Sum_probs=143.4
Q ss_pred cccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCccccceeeeeecCCCCCeEeeEEEEEeecC--CCCeEEEEEE
Q 012089 258 AIKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVF 335 (471)
Q Consensus 258 ~~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~~L~v~v~ 335 (471)
.+....|.|+|+|++|++|+.+|..|.+||||++++.++....++|+++++|+||.|||+|.|.+... ....|+|+||
T Consensus 14 ~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~ 93 (296)
T 1dqv_A 14 RYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVY 93 (296)
T ss_dssp ECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEE
T ss_pred EEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEE
Confidence 35667899999999999999999999999999999965544567999999999999999999998643 2458999999
Q ss_pred EcCCCCCCCeeEEEEEE-CcccCC-CCceEEEEecccccCCCCCCCCccceEEEEEEEEEeccCCcccccccccccccCC
Q 012089 336 DWDKVGGHDRLGMQLVP-LKLLTP-HETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKG 413 (471)
Q Consensus 336 d~d~~~~d~~lG~~~i~-L~~l~~-~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~ 413 (471)
|+|.+++|++||++.++ +.++.. ......|++|.... ......|+|++.+.|.|
T Consensus 94 d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~-----~~~~~~G~i~vsl~y~~------------------- 149 (296)
T 1dqv_A 94 DFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGG-----SEKADLGELNFSLCYLP------------------- 149 (296)
T ss_dssp ECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCS-----SCCSCCCEEEEEEEEET-------------------
T ss_pred EcCCCCCCceEEEEEeccccccccCCccceeeecccccc-----ccccccceEEEEEEecc-------------------
Confidence 99999999999999996 544443 33345566664421 12456799999999987
Q ss_pred CCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEcC-----eeeeeC---CCCCCcCC
Q 012089 414 SGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYKG-----DKKRTK---KNSRPCLE 471 (471)
Q Consensus 414 ~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~---~~~~dpyv~v~~~~-----~~~kTk---~t~nP~Wn 471 (471)
..|.|.|.|++|+||+. .+.+||||++++.. .++||+ +|.||+||
T Consensus 150 -------------~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wn 205 (296)
T 1dqv_A 150 -------------TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYN 205 (296)
T ss_dssp -------------TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEE
T ss_pred -------------ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeEC
Confidence 46899999999999986 36789999999962 234776 89999997
No 3
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=3.8e-21 Score=166.50 Aligned_cols=128 Identities=31% Similarity=0.451 Sum_probs=108.8
Q ss_pred CCceEEEEEEEEccccccCccCCCCCcEEEEEEcCccccceeeeeecCCCCCeEeeEEEEEeecC---CCCeEEEEEEEc
Q 012089 261 KPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP---ESQILQLQVFDW 337 (471)
Q Consensus 261 ~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~---~~~~L~v~v~d~ 337 (471)
...|.|+|+|++|++|+..|. |.+||||+++++++. ++|+++++++||+|||+|.|.+..+ ....|.|+|||+
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~---~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~ 79 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEK---KKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDF 79 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCE---EECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEET
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEe---EEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEEC
Confidence 456999999999999999998 999999999999754 5999999999999999999999753 357999999999
Q ss_pred CCCCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEEec
Q 012089 338 DKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPF 395 (471)
Q Consensus 338 d~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p~ 395 (471)
|.+++|++||++.++|.++..+.....|+++....+. .+....|+|+++++|.|.
T Consensus 80 d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~---~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 80 ETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNE---KGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp TCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECT---TCCEEEEEEEEEEEECCC
T ss_pred CCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCC---CCCCCCCEEEEEEEEECC
Confidence 9999999999999999999888777778773322221 123567999999999984
No 4
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.86 E-value=1.8e-21 Score=167.72 Aligned_cols=127 Identities=31% Similarity=0.511 Sum_probs=110.4
Q ss_pred cccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCccccceeeeeec-CCCCCeEeeEEEEEeecCCCCeEEEEEEE
Q 012089 258 AIKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKK-KNLNPEWNENFKLVVKEPESQILQLQVFD 336 (471)
Q Consensus 258 ~~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~kT~v~~-~t~nP~wne~f~f~v~~~~~~~L~v~v~d 336 (471)
....+.|.|+|+|++|++|+..|..|.+||||+++++++. ++|++++ ++.||.|||+|.|.+.+ ....|.|+|||
T Consensus 4 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d 79 (136)
T 1wfj_A 4 GSSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQD---QKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFD 79 (136)
T ss_dssp CCCCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCE---EECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECC
T ss_pred CCCCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCcc---ceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEE
Confidence 3456889999999999999999989999999999998764 4899988 89999999999999987 56799999999
Q ss_pred cCCCCCCCeeEEEEEECcccC-CCCceEEEEecccccCCCCCCCCccceEEEEEEEEEecc
Q 012089 337 WDKVGGHDRLGMQLVPLKLLT-PHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFK 396 (471)
Q Consensus 337 ~d~~~~d~~lG~~~i~L~~l~-~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p~~ 396 (471)
++.+++|++||++.++|.++. .+.....|++|.. ..+..|+|+++++|.|..
T Consensus 80 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~--------~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 80 KDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVK--------DEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp SSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEEE--------TTEEEEEEEEEEEEEECC
T ss_pred CCCCCCCceEEEEEEEHHHhccCCCCCcEEEEeec--------CCccCEEEEEEEEEEeCC
Confidence 999999999999999999994 4444567777752 257899999999999954
No 5
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.85 E-value=8.3e-21 Score=166.98 Aligned_cols=129 Identities=33% Similarity=0.514 Sum_probs=102.4
Q ss_pred cCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCcc---ccceeeeeecCCCCCeEeeEEEEEeecCCCCeEEEEEEE
Q 012089 260 KKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK---LPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFD 336 (471)
Q Consensus 260 ~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~v~v~d 336 (471)
....|.|+|+|++|++|+.+|..|.+||||++++.+.. ...++|+++++++||.|||+|.|.+... ...|.|+|||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d 94 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFD 94 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEE
Confidence 45679999999999999999988999999999998532 2456999999999999999999999764 5789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCce------EEEEecccccCCCCCCCCccceEEEEEEEEEe
Q 012089 337 WDKVGGHDRLGMQLVPLKLLTPHETK------EFTLDLLKHTNISDPKDMKQRGKIVVELTYVP 394 (471)
Q Consensus 337 ~d~~~~d~~lG~~~i~L~~l~~~~~~------~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p 394 (471)
++.+++|++||++.++|.++..+... ..|++|.... ...+..|+|+++++|.|
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~-----~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRS-----HKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSS-----TTCCCCSEEEEEEEECC
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCccccccccccccccccc-----CCCCcceEEEEEEEEeC
Confidence 99999999999999999999866532 4777775431 12467899999999986
No 6
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.85 E-value=1.2e-20 Score=160.18 Aligned_cols=121 Identities=26% Similarity=0.412 Sum_probs=104.5
Q ss_pred ceEEEEEEEEcccccc---CccCCCCCcEEEEEEcCccccceeeeeecCCCCCeEeeEEEEEeecCCCCeEEEEEEEcCC
Q 012089 263 VGILHVKVVRASKLLK---KDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDK 339 (471)
Q Consensus 263 ~G~L~V~v~~a~~L~~---~d~~g~~DPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~v~v~d~d~ 339 (471)
.|.|+|+|++|++|+. .|..|.+||||++++++.....++|+++++++||.|||+|.|.+.......|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 4899999999999998 4667999999999999754456799999999999999999999976667899999999998
Q ss_pred CCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEEe
Q 012089 340 VGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVP 394 (471)
Q Consensus 340 ~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p 394 (471)
. +|++||++.++|.++..+.....|++|.. ...|+|+++++..|
T Consensus 82 ~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~~----------~~~g~i~~~le~~~ 125 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMKVGEKKEVPFIFNQ----------VTEMVLEMSLEVAS 125 (126)
T ss_dssp S-CCEEEEEEEEEGGGSCTTCEEEEEEEETT----------TEEEEEEEEEECCC
T ss_pred C-CCceeEEEEEEHHHccCCCcEEEEEEcCC----------CceEEEEEEEEeCC
Confidence 7 48899999999999998888889998742 45788888876543
No 7
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.84 E-value=6.9e-21 Score=167.39 Aligned_cols=119 Identities=27% Similarity=0.317 Sum_probs=102.6
Q ss_pred ccCCceEEEEEEEEccccccCccC----------CCCCcEEEEEEcCccccceeeeeecCCCCCeEeeEEEEEeecCCCC
Q 012089 259 IKKPVGILHVKVVRASKLLKKDFL----------GTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQ 328 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~d~~----------g~~DPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~ 328 (471)
+....|.|+|+|++|++|+++|.. |.+||||++++++.+ ..+|+++++|+||.|||+|.|.+.+ .+
T Consensus 24 ~~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~--~~kT~v~~ktlnP~WNE~F~f~v~~--~~ 99 (157)
T 2fk9_A 24 TMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVR--VGQTSTKQKTNKPTYNEEFCANVTD--GG 99 (157)
T ss_dssp CCCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEE--EEECCCCSSCSSCEEEEEEEEEEEE--EC
T ss_pred hccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEe--eEEeeecCCCCCCccCcEEEEEcCC--CC
Confidence 446789999999999999998842 679999999998754 2589999999999999999999975 36
Q ss_pred eEEEEEEEcCCCCCCCeeEEEEEECcccCCC----CceEEEEecccccCCCCCCCCccceEEEEEEEEE
Q 012089 329 ILQLQVFDWDKVGGHDRLGMQLVPLKLLTPH----ETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (471)
Q Consensus 329 ~L~v~v~d~d~~~~d~~lG~~~i~L~~l~~~----~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~ 393 (471)
.|.|+|||+|.+++|++||++.++|.++..+ ...+.|++|. ..|+|+++++|.
T Consensus 100 ~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~------------~~G~i~l~l~~~ 156 (157)
T 2fk9_A 100 HLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE------------PEGKVFVVITLT 156 (157)
T ss_dssp EEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB------------SSCEEEEEEEEC
T ss_pred EEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC------------CCcEEEEEEEEE
Confidence 8999999999999999999999999998754 5678899872 379999999873
No 8
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.84 E-value=1e-20 Score=162.36 Aligned_cols=126 Identities=35% Similarity=0.516 Sum_probs=108.2
Q ss_pred cccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCccccceeeeeecCCCCCeEeeEEEEEeecCCCCeEEEEEEEc
Q 012089 258 AIKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDW 337 (471)
Q Consensus 258 ~~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~v~v~d~ 337 (471)
.+..+.|.|+|+|++|++|+..|..|.+||||+++++++. ++|+++++++||.|||+|.|.+.+. ...|.++|||+
T Consensus 7 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~ 82 (133)
T 2ep6_A 7 GDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDR---LQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDE 82 (133)
T ss_dssp CSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEE---EECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEE
T ss_pred cccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEE---EEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEEC
Confidence 4677889999999999999999999999999999998764 4899999999999999999999864 57899999999
Q ss_pred CCCCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEEe
Q 012089 338 DKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVP 394 (471)
Q Consensus 338 d~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p 394 (471)
+..++|++||++.++|.++..+. ..|++|.... ......|+|+++++|..
T Consensus 83 d~~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~-----~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 83 DGDKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKD-----LEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp ETTEEEEECCBCEEEGGGCCSSC--CEECCCBCSC-----TTSCCSSEEEEEEEEEE
T ss_pred CCCCCCCeeEEEEEEHHHccCCC--ceEEEeecCC-----CCCccceEEEEEEEEEe
Confidence 99889999999999999997654 3566665321 12467899999999864
No 9
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.84 E-value=2.1e-20 Score=161.11 Aligned_cols=117 Identities=24% Similarity=0.353 Sum_probs=101.0
Q ss_pred CceEEEEEEEEccccccCccCCC-----------CCcEEEEEEcCccccceeeeeecCCCCCeEeeEEEEEeecCCCCeE
Q 012089 262 PVGILHVKVVRASKLLKKDFLGT-----------SDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQIL 330 (471)
Q Consensus 262 ~~G~L~V~v~~a~~L~~~d~~g~-----------~DPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L 330 (471)
..|.|+|+|++|++|++.|..++ +||||++++++.. ..+|+++++|+||.|||+|.|.+.+. +.|
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~--~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L 79 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSR--IGQTATKQKTNSPAWHDEFVTDVCNG--RKI 79 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEE--EEECCCCSSCSSCEEEEEEEEEEEEE--CEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeE--eeeeeEECCCcCCccCCEEEEEecCC--CEE
Confidence 46999999999999999886554 9999999997653 35899999999999999999999764 789
Q ss_pred EEEEEEcCCCCCCCeeEEEEEECcccCCCC--ceEEEEecccccCCCCCCCCccceEEEEEEEEEe
Q 012089 331 QLQVFDWDKVGGHDRLGMQLVPLKLLTPHE--TKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVP 394 (471)
Q Consensus 331 ~v~v~d~d~~~~d~~lG~~~i~L~~l~~~~--~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p 394 (471)
.|+|||+|.+++|++||++.++|.++..+. ....|++| .+.|+|+++++|.+
T Consensus 80 ~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L------------~~~G~i~l~l~~~~ 133 (136)
T 1gmi_A 80 ELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDL------------EPEGKVYVIIDLSG 133 (136)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEEC------------BSSCEEEEEEEEEE
T ss_pred EEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEc------------CCCeEEEEEEEEEe
Confidence 999999999999999999999999998653 34678765 23799999999986
No 10
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.84 E-value=8.4e-20 Score=159.60 Aligned_cols=123 Identities=30% Similarity=0.436 Sum_probs=103.9
Q ss_pred cCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCccccceeeeeecCCCCCeEeeEEEEEeecCCCCeEEEEEEEcCC
Q 012089 260 KKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDK 339 (471)
Q Consensus 260 ~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~v~v~d~d~ 339 (471)
....|.|+|+|++|++|+.+|..|.+||||+++++++. ++|+++++|+||.|||+|.|.+..+ .+.|.++|||++.
T Consensus 13 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~ 88 (148)
T 3kwu_A 13 SKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTK---KRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDD 88 (148)
T ss_dssp --CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEE---EECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCC
T ss_pred cccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEE---EECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCC
Confidence 34579999999999999999999999999999997654 4899999999999999999999765 4789999999998
Q ss_pred C-----------CCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEE
Q 012089 340 V-----------GGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (471)
Q Consensus 340 ~-----------~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~ 393 (471)
. ++|++||++.++|.++. .....|++|.... ......|+|+++++|.
T Consensus 89 ~~~~~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~-----~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 89 DIKSRVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRT-----DKSAVSGAIRLHISVE 146 (148)
T ss_dssp SHHHHHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSS-----TTCCCCCEEEEEEEEE
T ss_pred CccccccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCC-----CCCCCceEEEEEEEEE
Confidence 5 78999999999999994 3456788876431 2245789999999984
No 11
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.83 E-value=4.8e-20 Score=166.09 Aligned_cols=130 Identities=32% Similarity=0.498 Sum_probs=101.0
Q ss_pred cCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCccc---cceeeeeecCCCCCeEeeEEEEEeecCCCCeEEEEEEE
Q 012089 260 KKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKL---PWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFD 336 (471)
Q Consensus 260 ~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~v~v~d 336 (471)
....|.|+|+|++|++|+.+|..|.+||||++++.+... ..++|+++++++||.|||+|.|.+.. ....|.|+|||
T Consensus 4 ~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~-~~~~L~~~V~d 82 (176)
T 3m7f_B 4 NDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLP-QRHRILFEVFD 82 (176)
T ss_dssp CTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECT-TTCEEEEEEEE
T ss_pred CCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcC-CCCEEEEEEEE
Confidence 346799999999999999999999999999999985322 35699999999999999999999975 35789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCce-E-----EEEecccccCCCCCCCCccceEEEEEEEEEec
Q 012089 337 WDKVGGHDRLGMQLVPLKLLTPHETK-E-----FTLDLLKHTNISDPKDMKQRGKIVVELTYVPF 395 (471)
Q Consensus 337 ~d~~~~d~~lG~~~i~L~~l~~~~~~-~-----~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p~ 395 (471)
++.+++|++||++.++|.++..+... + .|++|.... ...+..|+|+++++|.|.
T Consensus 83 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~-----~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 83 ENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRS-----HKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp CC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSS-----TTCCCCSEEEEEEEECC-
T ss_pred CCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccC-----CCCccCEEEEEEEEEEeC
Confidence 99999999999999999999866433 1 677775432 134578999999999996
No 12
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.81 E-value=3.5e-19 Score=152.53 Aligned_cols=125 Identities=29% Similarity=0.438 Sum_probs=100.7
Q ss_pred CceEEEEEEEEccccccCccCCCCCcEEEEEEcCccccceeeeeecCCCCCeEeeEEEEEeecCCCCeEEEEEEEcCCCC
Q 012089 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDKVG 341 (471)
Q Consensus 262 ~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~v~v~d~d~~~ 341 (471)
....|+|+|++|++|+.+|..|.+||||++++++.. ..++|+++++|+||.|||+|.|.+... +.|.|+|||++.++
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~~ 79 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSG-QCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKIH 79 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTC-CEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGTT
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCC-ceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCCC
Confidence 347899999999999999999999999999997643 456999999999999999999999764 35999999999887
Q ss_pred C---CCeeEEEEEECcccC-CCCceEEEEecccccCCCCCCCCccceEEEEEEEE
Q 012089 342 G---HDRLGMQLVPLKLLT-PHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTY 392 (471)
Q Consensus 342 ~---d~~lG~~~i~L~~l~-~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y 392 (471)
+ |++||++.+++.++. .......+++|... .+. ...+..|+|++++++
T Consensus 80 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~-~~~--~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 80 KKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKL-NPS--DTDAVRGQIVVSLQT 131 (132)
T ss_dssp SSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCS-STT--CCCCCCSEEEEEEEE
T ss_pred CCCCCCceEEEEEeHHHhhcccccCcEEEeeeec-CCC--CCCceeEEEEEEEEc
Confidence 6 899999999999883 22333456776542 111 124578999999875
No 13
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.80 E-value=1e-19 Score=160.25 Aligned_cols=111 Identities=14% Similarity=0.104 Sum_probs=96.2
Q ss_pred ccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcC---ccccceeeeeecCCCCCeEeeEEEEEeecC--CCCeEEEE
Q 012089 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTG---EKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQ 333 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~---~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~~L~v~ 333 (471)
+....+.|+|+|++|+||+.+|.+|.+||||++++.+ +....+||+++++|+||+|||+|.|.+... ....|.|+
T Consensus 38 y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~ 117 (155)
T 2z0u_A 38 YDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVD 117 (155)
T ss_dssp EETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEE
T ss_pred EcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEE
Confidence 5567799999999999999999999999999999986 333457999999999999999999998642 25689999
Q ss_pred EEEcCCCCCCCeeEEEEEECcccCC-CCceEEEEecc
Q 012089 334 VFDWDKVGGHDRLGMQLVPLKLLTP-HETKEFTLDLL 369 (471)
Q Consensus 334 v~d~d~~~~d~~lG~~~i~L~~l~~-~~~~~~~~~l~ 369 (471)
|||+|.+++|++||++.++|.++.. +.....|++|.
T Consensus 118 V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 118 VCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 9999999999999999999999963 55667888764
No 14
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.79 E-value=5.8e-19 Score=158.27 Aligned_cols=126 Identities=18% Similarity=0.249 Sum_probs=102.6
Q ss_pred cCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCccccceeeeeecCCCCCeEeeEEEEEeecCCCCeEEEEEEEcCC
Q 012089 260 KKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDK 339 (471)
Q Consensus 260 ~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~v~v~d~d~ 339 (471)
....+.|+|+|++|++|+..+..+.+||||++++++ ..++|+++++|+||+|||+|.|.+.. .+.|.|+|||+|.
T Consensus 32 ~~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~---~~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~ 106 (173)
T 2nq3_A 32 LTMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDG---QSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQT 106 (173)
T ss_dssp CSCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETT---EEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCS
T ss_pred cCCceEEEEEEEEeECCCCcccCCCCCeEEEEEECC---EEeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCC
Confidence 345789999999999999444445599999999987 34599999999999999999999853 6799999999999
Q ss_pred CCCCCeeEEEEEECcccCCCC-----ceEEEEecccccCCCCCCCCccceEEEEEEEEEec
Q 012089 340 VGGHDRLGMQLVPLKLLTPHE-----TKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPF 395 (471)
Q Consensus 340 ~~~d~~lG~~~i~L~~l~~~~-----~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p~ 395 (471)
+++|++||++.++|.++..+. ....|++|... ....+..|+|++.++|++.
T Consensus 107 ~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~-----~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 107 LKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGD-----KEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp SSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEES-----SCTTSEEEEEEEEEESEEC
T ss_pred CCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccC-----CCCCcccEEEEEEEeeeec
Confidence 999999999999999986432 12567777553 1134678999999999985
No 15
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.79 E-value=5.4e-19 Score=153.52 Aligned_cols=112 Identities=33% Similarity=0.430 Sum_probs=99.6
Q ss_pred ccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCccccceeeeeecCCCCCeEeeEEEEEeecC--CCCeEEEEEEE
Q 012089 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVFD 336 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~~L~v~v~d 336 (471)
+....+.|+|+|++|++|+..|..+.+||||++++.+.....++|+++++++||.|||+|.|.+... ....|.|+|||
T Consensus 29 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 108 (143)
T 3f04_A 29 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 108 (143)
T ss_dssp EETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEe
Confidence 4567899999999999999999999999999999976554567999999999999999999998633 35799999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 012089 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (471)
Q Consensus 337 ~d~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~ 370 (471)
++.+++|++||++.++|.++..+.....|++|.+
T Consensus 109 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 109 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCCCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 9999999999999999999998888889998753
No 16
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=4e-19 Score=153.99 Aligned_cols=112 Identities=38% Similarity=0.548 Sum_probs=98.5
Q ss_pred ccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCccccceeeeeecCCCCCeEeeEEEEEeec---CCCCeEEEEEE
Q 012089 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKE---PESQILQLQVF 335 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~---~~~~~L~v~v~ 335 (471)
+....+.|+|+|++|++|+.+|..|.+||||++++.++....++|+++++++||.|||+|.|.+.. .....|.|+||
T Consensus 21 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 100 (141)
T 2d8k_A 21 YNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVL 100 (141)
T ss_dssp ECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEE
Confidence 455679999999999999999999999999999997654456799999999999999999998532 23578999999
Q ss_pred EcCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 012089 336 DWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (471)
Q Consensus 336 d~d~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~ 370 (471)
|++.+++|++||++.++|.++..+.....|++|..
T Consensus 101 d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 101 DYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp ECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred ECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 99999999999999999999998888889999865
No 17
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.79 E-value=7.1e-19 Score=154.45 Aligned_cols=112 Identities=33% Similarity=0.430 Sum_probs=99.2
Q ss_pred ccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCccccceeeeeecCCCCCeEeeEEEEEeecC--CCCeEEEEEEE
Q 012089 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVFD 336 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~~L~v~v~d 336 (471)
+....+.|+|+|++|+||+..|..+.+||||++++.+.....++|+++++++||.|||+|.|.+... ....|.|+|||
T Consensus 37 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 116 (152)
T 1rsy_A 37 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 116 (152)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEE
Confidence 5567799999999999999999999999999999976544567999999999999999999988642 35789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 012089 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (471)
Q Consensus 337 ~d~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~ 370 (471)
++.+++|++||++.++|.++..+.....|++|..
T Consensus 117 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 117 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 9999999999999999999988888889998853
No 18
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.78 E-value=1.1e-18 Score=149.88 Aligned_cols=111 Identities=24% Similarity=0.288 Sum_probs=96.0
Q ss_pred ccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCc--cccceeeeeecCCCCCeEeeEEEEE-eecC--CCCeEEEE
Q 012089 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLV-VKEP--ESQILQLQ 333 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~--~~~~~kT~v~~~t~nP~wne~f~f~-v~~~--~~~~L~v~ 333 (471)
.....|.|+|+|++|+||+. +..|.+||||++++.+. ....++|+++++|+||+|||+|.|. +... ....|.|+
T Consensus 15 ~~~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~ 93 (134)
T 2b3r_A 15 VSYRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLS 93 (134)
T ss_dssp EEEETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEE
T ss_pred EeecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEE
Confidence 44467999999999999997 77899999999999543 3445799999999999999999999 7532 45799999
Q ss_pred EEEcCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 012089 334 VFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (471)
Q Consensus 334 v~d~d~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~ 370 (471)
|||++.+++|++||++.++|.++..+.....|++|..
T Consensus 94 V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 94 VLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp EEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred EEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 9999999999999999999999998888889998854
No 19
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.77 E-value=2.5e-18 Score=148.31 Aligned_cols=112 Identities=25% Similarity=0.377 Sum_probs=95.1
Q ss_pred ccCCceEEEEEEEEccccccCccC-CCCCcEEEEEEcCccccceeeeeecCCCCCeEeeEEEEE-eecC--CCCeEEEEE
Q 012089 259 IKKPVGILHVKVVRASKLLKKDFL-GTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLV-VKEP--ESQILQLQV 334 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~d~~-g~~DPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~~~--~~~~L~v~v 334 (471)
+....+.|+|+|++|++|+.+|.. +.+||||++++.+.....++|+++++++||+|||+|.|. +... ....|.|+|
T Consensus 17 y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V 96 (138)
T 1ugk_A 17 YNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTI 96 (138)
T ss_dssp EEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEE
Confidence 455679999999999999999985 899999999998654456799999999999999999996 5432 246899999
Q ss_pred EEcCCCCCCCeeEEEEEECcccCCCCc-eEEEEeccc
Q 012089 335 FDWDKVGGHDRLGMQLVPLKLLTPHET-KEFTLDLLK 370 (471)
Q Consensus 335 ~d~d~~~~d~~lG~~~i~L~~l~~~~~-~~~~~~l~~ 370 (471)
||+|.+++|++||++.++|.++..+.. ...|++|.+
T Consensus 97 ~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 97 LSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp EEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred EECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 999999999999999999999987644 356677754
No 20
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.75 E-value=4.4e-18 Score=146.90 Aligned_cols=109 Identities=22% Similarity=0.208 Sum_probs=93.4
Q ss_pred ccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCc-cccceeeeeecCCCCCeEeeEEEEEeecCC--CCeEEEEEE
Q 012089 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE-KLPWKKTTVKKKNLNPEWNENFKLVVKEPE--SQILQLQVF 335 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~-~~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~~~L~v~v~ 335 (471)
+....+.|+|+|++|++ +|..|.+||||++++.+. ....++|+++++|+||.|||+|.|.+.... ...|.|+||
T Consensus 21 y~~~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~ 97 (138)
T 1wfm_A 21 YDCQKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLR 97 (138)
T ss_dssp EETTTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEE
T ss_pred EeCCCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEE
Confidence 55677999999999993 677899999999999642 333568999999999999999999986432 568999999
Q ss_pred EcCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 012089 336 DWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (471)
Q Consensus 336 d~d~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~ 370 (471)
|+|.+++|++||++.++|.++..+.....|++|..
T Consensus 98 d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 98 TCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp ECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred ECCCCCCCcEEEEEEEEcccccCcccccceeeCcC
Confidence 99999999999999999999986667788998865
No 21
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.75 E-value=3.5e-18 Score=148.17 Aligned_cols=112 Identities=30% Similarity=0.446 Sum_probs=97.0
Q ss_pred ccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCc--cccceeeeeecCCCCCeEeeEEEEE-eecC--CCCeEEEE
Q 012089 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLV-VKEP--ESQILQLQ 333 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~--~~~~~kT~v~~~t~nP~wne~f~f~-v~~~--~~~~L~v~ 333 (471)
+....+.|+|+|++|++|+..+..|.+||||++++.+. ....++|+++++++||.|||+|.|. +... ....|.|+
T Consensus 24 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 103 (142)
T 2chd_A 24 YDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRIS 103 (142)
T ss_dssp EEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEE
Confidence 44577999999999999999998999999999999763 2345799999999999999999998 5421 13689999
Q ss_pred EEEcCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 012089 334 VFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (471)
Q Consensus 334 v~d~d~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~ 370 (471)
|||++.+++|++||++.++|.++..+.....|++|..
T Consensus 104 V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 104 VCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred EEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 9999999999999999999999998888889988753
No 22
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.75 E-value=3.8e-18 Score=145.31 Aligned_cols=109 Identities=23% Similarity=0.349 Sum_probs=88.4
Q ss_pred ccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCcc--ccceeeeeecCCCCCeEeeEEEEEeec---CCCCeEEEE
Q 012089 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKE---PESQILQLQ 333 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~--~~~~kT~v~~~t~nP~wne~f~f~v~~---~~~~~L~v~ 333 (471)
+....|.|+|+|++|+||+.+|..|.+||||++++.+.. ...++|+++++|+||.|||+|.|.+.. .....|.|+
T Consensus 13 y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~ 92 (129)
T 2bwq_A 13 FDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 92 (129)
T ss_dssp EETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEE
T ss_pred EccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEE
Confidence 555679999999999999999999999999999995432 345799999999999999999999532 235799999
Q ss_pred EEEcCCCCC--CCeeEEEEEECcccCCCCceEEEEec
Q 012089 334 VFDWDKVGG--HDRLGMQLVPLKLLTPHETKEFTLDL 368 (471)
Q Consensus 334 v~d~d~~~~--d~~lG~~~i~L~~l~~~~~~~~~~~l 368 (471)
|||++..++ |++||++.++|.++..+. ...|++|
T Consensus 93 V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 128 (129)
T 2bwq_A 93 LWDQARVREEESEFLGEILIELETALLDD-EPHWYKL 128 (129)
T ss_dssp EEEC-------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred EEECCcCcCcCCceeEEEEEEccccCCCc-CCccEEC
Confidence 999999887 999999999999987654 6677775
No 23
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.75 E-value=1.9e-18 Score=150.94 Aligned_cols=113 Identities=24% Similarity=0.342 Sum_probs=98.0
Q ss_pred ccCCceEEEEEEEEccccccCc-cCCCCCcEEEEEEcCcc--ccceeeeeecCCCCCeEeeEEEEEeecCC--CCeEEEE
Q 012089 259 IKKPVGILHVKVVRASKLLKKD-FLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKEPE--SQILQLQ 333 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~d-~~g~~DPyv~v~l~~~~--~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~~~L~v~ 333 (471)
+....|.|+|+|++|+||+.+| ..|.+||||++++.+.. ...++|+++++|+||.|||+|.|.+.... ...|.|+
T Consensus 18 y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~ 97 (148)
T 3fdw_A 18 YEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFS 97 (148)
T ss_dssp EETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEE
Confidence 5566899999999999999988 57999999999997653 23679999999999999999999987542 4579999
Q ss_pred EEEcCCCCCCCeeEEEEEECcccCCCCceEEEEecccc
Q 012089 334 VFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKH 371 (471)
Q Consensus 334 v~d~d~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~~ 371 (471)
|||+|.+++|++||++.++|.++..+.....|++|...
T Consensus 98 V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 135 (148)
T 3fdw_A 98 VWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGK 135 (148)
T ss_dssp EEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC
T ss_pred EEECCCCcCCcEEEEEEEEcccccccCCccceEECcCc
Confidence 99999999999999999999999877677889998653
No 24
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=1.9e-18 Score=150.81 Aligned_cols=112 Identities=27% Similarity=0.360 Sum_probs=94.9
Q ss_pred ccCCceEEEEEEEEccccccC-cc------CCCCCcEEEEEEcCccccceeeeeecCCCCCeEeeEEEEEeecC--CCCe
Q 012089 259 IKKPVGILHVKVVRASKLLKK-DF------LGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQI 329 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~-d~------~g~~DPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~~ 329 (471)
+....|.|+|+|++|++|+.. |. .+.+||||++++.+.....++|+++++++||+|||+|.|.+... ....
T Consensus 21 y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 100 (147)
T 2enp_A 21 YDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRT 100 (147)
T ss_dssp EETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSE
T ss_pred EcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCE
Confidence 556789999999999999984 43 35899999999986544567999999999999999999998642 2458
Q ss_pred EEEEEEEcCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 012089 330 LQLQVFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (471)
Q Consensus 330 L~v~v~d~d~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~ 370 (471)
|.|+|||++.+++|++||++.++|.++........|+.|.+
T Consensus 101 L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~ 141 (147)
T 2enp_A 101 LLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIP 141 (147)
T ss_dssp EEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBC
T ss_pred EEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeec
Confidence 99999999999999999999999999987766677887754
No 25
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=3.4e-18 Score=148.24 Aligned_cols=111 Identities=29% Similarity=0.306 Sum_probs=93.8
Q ss_pred ccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCcc--ccceeeeeecCCCCCeEeeEEEEEeecC--CCCeEEEEE
Q 012089 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQV 334 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~--~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~~L~v~v 334 (471)
+....+.|+|+|++|++|+.+|..| +||||++++.+.. ...++|+++++|+||+|||+|.|.+... ....|.|+|
T Consensus 19 y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 97 (142)
T 2dmg_A 19 HSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAV 97 (142)
T ss_dssp EETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEE
Confidence 4556799999999999999999888 9999999996543 2567999999999999999999998532 245899999
Q ss_pred EEcCCCCC--CCeeEEEEEECcccCCCCceEEEEeccc
Q 012089 335 FDWDKVGG--HDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (471)
Q Consensus 335 ~d~d~~~~--d~~lG~~~i~L~~l~~~~~~~~~~~l~~ 370 (471)
||++.++. |++||++.++|.++..+.....|++|..
T Consensus 98 ~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~ 135 (142)
T 2dmg_A 98 KNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTE 135 (142)
T ss_dssp EECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBC
T ss_pred EECCCccccCCcEEEEEEEecccccccccccceeeccC
Confidence 99998763 5799999999999987767777888765
No 26
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=1.1e-17 Score=146.20 Aligned_cols=107 Identities=35% Similarity=0.501 Sum_probs=93.6
Q ss_pred ceEEEEEEEEccccccCccCCCCCcEEEEEEcCcc--ccceeeeeecCCCCCeEeeEEEEEeecCC-CCeEEEEEEEcCC
Q 012089 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKEPE-SQILQLQVFDWDK 339 (471)
Q Consensus 263 ~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~--~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~~~L~v~v~d~d~ 339 (471)
.|.|+|+|++|++|+..|..+.+||||++++.+.. ...++|+++++++||.|||+|.|.+.... ...|.|+|||++.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 58899999999999999999999999999998632 34579999999999999999999987532 4689999999999
Q ss_pred CCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 012089 340 VGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (471)
Q Consensus 340 ~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~ 370 (471)
+++|++||++.++|.++..+ ....|++|..
T Consensus 110 ~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 110 TSRNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp SSCCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred CCCCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 99999999999999999876 4678888854
No 27
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.74 E-value=5.1e-17 Score=169.44 Aligned_cols=177 Identities=22% Similarity=0.311 Sum_probs=135.0
Q ss_pred eeEEEEEcCCCceE-EEEEEEeCCCccc-cchhhHHHHHHHHHhhhccccc-----CCceee-eccC-------------
Q 012089 195 FATMVVSLMERPHV-DFGIKILGGDIMS-IPGLYQFIQKCITKYVAGIYIW-----PQTYEI-PILD------------- 253 (471)
Q Consensus 195 ~~~~~~sf~~~P~i-d~~~~~~g~~i~~-~P~l~~~i~~~i~~~l~~~~v~-----P~~~~i-~l~~------------- 253 (471)
+..|.=|+...|.+ ++.+.|+ .++.. .+.....++.++.+++.+.-.+ |-.-.. ++..
T Consensus 304 ~~~W~~Sv~~~P~~I~~~l~PI-~~Lv~~~~~kr~nLk~Ai~~Yl~e~~~c~~C~~PC~nn~~~l~g~~C~C~C~~~~~t 382 (540)
T 3nsj_A 304 FSTWTASLPSNPGLVDYSLEPL-HTLLEEQNPKREALRQAISHYIMSRARWQNCSRPCRSGQHKSSHDSCQCECQDSKVT 382 (540)
T ss_dssp HHHHHHHTTTSCEEEEEEEEEG-GGGSCTTCTHHHHHHHHHHHHHHHTCBCCCTTSCCBTTEEECSSCTTCEEESCTTTB
T ss_pred HHHHHHHHhhCCceEEEEEEEH-HHhcCCcHHHHHHHHHHHHHHHHhcCchhhhcccccCCCccCCCCceEeeCCCCCCc
Confidence 45566666777855 9999998 45543 4667788999999999887666 421111 2211
Q ss_pred -cccccccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCccccceeeeeecCCCCCeEeeEEEEEeec-CCCCeEE
Q 012089 254 -ASSVAIKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKE-PESQILQ 331 (471)
Q Consensus 254 -~~~~~~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~~L~ 331 (471)
...+......|.|+|+|++|++|+. |.+|++||||+++++++. ++|+++++++||+|||+|.|.+.. ...+.|+
T Consensus 383 ~~~~C~~~~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~---~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~ 458 (540)
T 3nsj_A 383 NQDCCPRQRGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQE---FRTGVVWNNNNPRWTDKMDFENVLLSTGGPLR 458 (540)
T ss_dssp CGGGCBSSTTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEE---EECCCBCSCSSCBCCCCEEEEEEETTTCCCEE
T ss_pred ccccccccCcccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEe---eeeeeecCCCCCCCCeEEEEEEecCCCCCEEE
Confidence 1112345568999999999999998 999999999999998653 699999999999999999998653 3578899
Q ss_pred EEEEEcCCCCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEE
Q 012089 332 LQVFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (471)
Q Consensus 332 v~v~d~d~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~ 393 (471)
|+|||+|..++||+||++.++|.. + ..+.|+.+ ..|+|+++++..
T Consensus 459 ~~V~D~D~~~~dD~LG~~~~~L~~---g-~~~~~~~l-------------~~G~l~~~~~~~ 503 (540)
T 3nsj_A 459 VQVWDADYGWDDDLLGSCDRSPHS---G-FHEVTCEL-------------NHGRVKFSYHAK 503 (540)
T ss_dssp EEEEECCSSSCCEEEEEEEECCCS---E-EEEEEEEC-------------SSSEEEEEEEEE
T ss_pred EEEEECCCCCCCCEEEEEEEEeeC---C-cEEEEEEc-------------CCeEEEEEEEEE
Confidence 999999999999999999999882 2 35566653 258888887744
No 28
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.74 E-value=8.1e-18 Score=144.78 Aligned_cols=108 Identities=32% Similarity=0.494 Sum_probs=93.8
Q ss_pred CceEEEEEEEEccccccCccCCCCCcEEEEEEcCc--cccceeeeeecCCCCCeEeeEEEEEeecCC-CCeEEEEEEEcC
Q 012089 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEPE-SQILQLQVFDWD 338 (471)
Q Consensus 262 ~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~--~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~~~L~v~v~d~d 338 (471)
..|.|+|+|++|++|+..|..|.+||||++++.+. ....++|++++++.||.|||+|.|.+.... ...|.|+|||++
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 45999999999999999999999999999999643 234579999999999999999999986532 458999999999
Q ss_pred CCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 012089 339 KVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (471)
Q Consensus 339 ~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~ 370 (471)
..++|++||++.++|.++..+. ...|++|..
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~ 124 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKMP-ASGWYKLLN 124 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHSC-EEEEEECBC
T ss_pred CCCCCceEEEEEEeHHHhccCc-cCceEECcC
Confidence 9999999999999999997654 778888864
No 29
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=2.5e-18 Score=149.09 Aligned_cols=108 Identities=28% Similarity=0.432 Sum_probs=93.7
Q ss_pred ceEEEEEEEEccccccCccCCCCCcEEEEEEcCccc-----------cceeeeeecCCCCCeEeeEEEEE-eec--CCCC
Q 012089 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKL-----------PWKKTTVKKKNLNPEWNENFKLV-VKE--PESQ 328 (471)
Q Consensus 263 ~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~-----------~~~kT~v~~~t~nP~wne~f~f~-v~~--~~~~ 328 (471)
.|.|+|+|++|++|+.+|..|.+||||++++.+... ..++|+++++|+||.|||+|.|. +.. ....
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 589999999999999999999999999999987531 24689999999999999999997 542 2457
Q ss_pred eEEEEEEEcCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 012089 329 ILQLQVFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (471)
Q Consensus 329 ~L~v~v~d~d~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~ 370 (471)
.|.|+|||+|.+++|++||++.++|.++..+.....|++|..
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCc
Confidence 999999999999999999999999999987666778888854
No 30
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=6.2e-18 Score=146.27 Aligned_cols=111 Identities=23% Similarity=0.339 Sum_probs=94.3
Q ss_pred ccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCcc--ccceeeeeecCCCCCeEeeEEEEEeec---CCCCeEEEE
Q 012089 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKE---PESQILQLQ 333 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~--~~~~kT~v~~~t~nP~wne~f~f~v~~---~~~~~L~v~ 333 (471)
+....+.|+|+|++|++|+.+|..|.+||||++++.+.. ...++|+++++|+||+|||+|.|.+.. .....|.|+
T Consensus 16 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 95 (141)
T 1v27_A 16 FDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 95 (141)
T ss_dssp EETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEE
T ss_pred EeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEE
Confidence 455679999999999999999999999999999995432 345699999999999999999998532 235799999
Q ss_pred EEEcCCCCC--CCeeEEEEEECcccCCCCceEEEEeccc
Q 012089 334 VFDWDKVGG--HDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (471)
Q Consensus 334 v~d~d~~~~--d~~lG~~~i~L~~l~~~~~~~~~~~l~~ 370 (471)
|||++.+++ |++||++.++|.++..+. ...|++|..
T Consensus 96 V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~ 133 (141)
T 1v27_A 96 LWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQT 133 (141)
T ss_dssp EEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBC
T ss_pred EEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECcc
Confidence 999999887 999999999999987654 778888865
No 31
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.73 E-value=8.9e-18 Score=150.45 Aligned_cols=109 Identities=26% Similarity=0.354 Sum_probs=95.0
Q ss_pred CceEEEEEEEEccccccCcc-CCCCCcEEEEEEcCcc--ccceeeeeecCCCCCeEeeEEEEEeecCCCCeEEEEEE-Ec
Q 012089 262 PVGILHVKVVRASKLLKKDF-LGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVF-DW 337 (471)
Q Consensus 262 ~~G~L~V~v~~a~~L~~~d~-~g~~DPyv~v~l~~~~--~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~v~v~-d~ 337 (471)
..|.|+|+|++|++|+.+|. .|.+||||++++.++. ...++|+++++|+||+|||+|.|.+.. ....|.|+|| |+
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QGKVLQVIVWGDY 106 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TTEEEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CCCEEEEEEEEcC
Confidence 57999999999999999985 7999999999997542 235689999999999999999999854 4689999999 99
Q ss_pred CCCCCCCeeEEEEEECcccCCCCceEEEEecccc
Q 012089 338 DKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKH 371 (471)
Q Consensus 338 d~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~~ 371 (471)
|.+++|++||++.++|.++..+.....|++|...
T Consensus 107 d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 107 GRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp STTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 9999999999999999999987788899998654
No 32
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.72 E-value=2e-17 Score=145.36 Aligned_cols=112 Identities=26% Similarity=0.362 Sum_probs=94.7
Q ss_pred cccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCc--cccceeeeeecCCCCCeEeeEEEEEeecC-CCCeEEEEE
Q 012089 258 AIKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEP-ESQILQLQV 334 (471)
Q Consensus 258 ~~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~--~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~~L~v~v 334 (471)
.+....|.|+|+|++|++|+..| .|.+||||++++.+. ....++|+++++|+||.|||+|.|.+... ....|.|+|
T Consensus 21 ~y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V 99 (153)
T 3fbk_A 21 SIDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTV 99 (153)
T ss_dssp EEEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEE
T ss_pred EEECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEE
Confidence 35667899999999999999998 699999999999653 23457999999999999999999998422 235699999
Q ss_pred EEcCCCCC-CCeeEEEEEECcccCC-CCceEEEEeccc
Q 012089 335 FDWDKVGG-HDRLGMQLVPLKLLTP-HETKEFTLDLLK 370 (471)
Q Consensus 335 ~d~d~~~~-d~~lG~~~i~L~~l~~-~~~~~~~~~l~~ 370 (471)
||++.+++ |++||++.++|.++.. +.....|++|..
T Consensus 100 ~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~ 137 (153)
T 3fbk_A 100 WNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLG 137 (153)
T ss_dssp EECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBC
T ss_pred EeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCC
Confidence 99998877 9999999999999984 677788998865
No 33
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.72 E-value=4.8e-17 Score=143.81 Aligned_cols=112 Identities=35% Similarity=0.475 Sum_probs=93.4
Q ss_pred ccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCc--cccceeeeeecCCCCCeEeeEEEEEeecCC--CCeEEEEE
Q 012089 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEPE--SQILQLQV 334 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~--~~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~~~L~v~v 334 (471)
+....|.|+|+|++|+||+..|..|.+||||++++.+. ....++|+++++|+||.|||+|.|.+.... ...|.|+|
T Consensus 20 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V 99 (159)
T 1tjx_A 20 YVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 99 (159)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred EcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEE
Confidence 55678999999999999999999999999999999743 234578999999999999999999986432 46799999
Q ss_pred EEcCCCCCCCeeEEEEEECccc------------CCCCceEEEEeccc
Q 012089 335 FDWDKVGGHDRLGMQLVPLKLL------------TPHETKEFTLDLLK 370 (471)
Q Consensus 335 ~d~d~~~~d~~lG~~~i~L~~l------------~~~~~~~~~~~l~~ 370 (471)
||++.+++|++||++.+++..+ .++.....|++|..
T Consensus 100 ~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 100 LDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 147 (159)
T ss_dssp EECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred EECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcC
Confidence 9999999999999999999853 23445567777654
No 34
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.71 E-value=3.1e-17 Score=141.20 Aligned_cols=99 Identities=32% Similarity=0.460 Sum_probs=86.2
Q ss_pred ccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCc--cccceeeeeecCCCCCeEeeEEEEEeecCC--CCeEEEEE
Q 012089 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEPE--SQILQLQV 334 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~--~~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~~~L~v~v 334 (471)
+....|.|+|+|++|++|+..|..|.+||||++++.+. ....++|++++++.||.|||+|.|.+.... ...|.|+|
T Consensus 11 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V 90 (138)
T 3n5a_A 11 YNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITV 90 (138)
T ss_dssp EETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEE
T ss_pred EcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEE
Confidence 45567999999999999999999999999999999754 234568999999999999999999986533 36899999
Q ss_pred EEcCCCCCCCeeEEEEEECcccC
Q 012089 335 FDWDKVGGHDRLGMQLVPLKLLT 357 (471)
Q Consensus 335 ~d~d~~~~d~~lG~~~i~L~~l~ 357 (471)
||++.+++|++||++.++|.++.
T Consensus 91 ~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 91 MDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp EECCSSSCCEEEEEEEESSSSCH
T ss_pred EECCCCCCCcEEEEEEEccccCC
Confidence 99999999999999999998753
No 35
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.71 E-value=8.9e-17 Score=143.16 Aligned_cols=99 Identities=33% Similarity=0.442 Sum_probs=86.9
Q ss_pred cccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCcc--ccceeeeeecCCCCCeEeeEEEEEeecC--CCCeEEEE
Q 012089 258 AIKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQ 333 (471)
Q Consensus 258 ~~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~--~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~~L~v~ 333 (471)
.+....|.|+|+|++|++|+.+|..|.+||||++++.+.. ...++|+++++|+||+|||+|.|.+... ....|.|+
T Consensus 31 ~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~ 110 (166)
T 2cm5_A 31 MYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDIS 110 (166)
T ss_dssp EEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEE
T ss_pred EEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEE
Confidence 3556789999999999999999999999999999998642 3467999999999999999999998643 25689999
Q ss_pred EEEcCCCCCCCeeEEEEEECccc
Q 012089 334 VFDWDKVGGHDRLGMQLVPLKLL 356 (471)
Q Consensus 334 v~d~d~~~~d~~lG~~~i~L~~l 356 (471)
|||++.+++|++||++.++|.++
T Consensus 111 V~d~d~~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 111 VWDYDIGKSNDYIGGCQLGISAK 133 (166)
T ss_dssp EEECCSSSCCEEEEEEEEETTCC
T ss_pred EEECCCCCCCcEEEeEEEecccC
Confidence 99999999999999999999875
No 36
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.69 E-value=1.9e-16 Score=135.27 Aligned_cols=118 Identities=18% Similarity=0.259 Sum_probs=83.7
Q ss_pred CceEEEEEEEEccccccCccCCCCCcEEEEEEcCccccceeeeee-cCCCCCeEeeEEEEEeecCCCCeEEEEEEEcCCC
Q 012089 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVK-KKNLNPEWNENFKLVVKEPESQILQLQVFDWDKV 340 (471)
Q Consensus 262 ~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~kT~v~-~~t~nP~wne~f~f~v~~~~~~~L~v~v~d~d~~ 340 (471)
+.|.|+|+|++|++++. .|.+||||+++ . +. .+|+++ .++.||.|||+|.|.+.+. ...|.|+|||+| +
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~-~-~~---~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~ 72 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK-V-QN---VKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-L 72 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE-E-TT---EEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-S
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE-e-cC---EEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-C
Confidence 46999999999998853 58899999999 2 22 245444 4799999999999999864 457999999999 8
Q ss_pred CCCCeeEEEEEECcccCCCC--ceEEEEecccccCCCCCCCCccc-------eEEEEEEEE
Q 012089 341 GGHDRLGMQLVPLKLLTPHE--TKEFTLDLLKHTNISDPKDMKQR-------GKIVVELTY 392 (471)
Q Consensus 341 ~~d~~lG~~~i~L~~l~~~~--~~~~~~~l~~~~~~~~~~~~~~~-------G~l~l~l~y 392 (471)
++|++||++.++|.++.... ....|.++...... .+++.. +.+.++++|
T Consensus 73 ~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~---~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 73 IWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIM---ADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp SCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC-------------CCSCCCCCEEEEEEEE
T ss_pred CCCCeEEEEEEEHHHhhhcCCCCccccEEccccccc---CCCcCcceECCCccEEEEEEEe
Confidence 89999999999999986432 11244444332110 112333 448887776
No 37
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.69 E-value=7.5e-17 Score=141.58 Aligned_cols=97 Identities=29% Similarity=0.374 Sum_probs=79.7
Q ss_pred ccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCc--cccceeeeeecCCCCCeEeeEEEEEeecCC--CCeEEEEE
Q 012089 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEPE--SQILQLQV 334 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~--~~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~~~L~v~v 334 (471)
+....+.|+|+|++|++|+.+|..|.+||||++++.++ ....++|+++++|+||.|||+|.|.+.... ...|.|+|
T Consensus 25 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V 104 (153)
T 1w15_A 25 YQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLV 104 (153)
T ss_dssp EETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEE
T ss_pred EcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEE
Confidence 55567999999999999999998999999999999543 223569999999999999999999987543 46899999
Q ss_pred EEcCCCCCCCeeEEEEEECcc
Q 012089 335 FDWDKVGGHDRLGMQLVPLKL 355 (471)
Q Consensus 335 ~d~d~~~~d~~lG~~~i~L~~ 355 (471)
||++.+++|++||++.+++.+
T Consensus 105 ~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 105 LDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp EECCTTSCCEEEEEEEESTTC
T ss_pred EeCCCCCCCcEEEEEEECCCC
Confidence 999999999999999999988
No 38
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.68 E-value=2.3e-16 Score=133.33 Aligned_cols=119 Identities=19% Similarity=0.305 Sum_probs=100.5
Q ss_pred ceEEEEEEEEccccccCccCCCCCcEEEEEEcCccccceeeeeec-CCCCCeEeeEEEEEeecCC--CCeEEEEEEEcCC
Q 012089 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKK-KNLNPEWNENFKLVVKEPE--SQILQLQVFDWDK 339 (471)
Q Consensus 263 ~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~kT~v~~-~t~nP~wne~f~f~v~~~~--~~~L~v~v~d~d~ 339 (471)
.-.|+|+|.+|.||+ |++|||+++.+.+.+ ++|++++ ++.||.|||.|.|++..+. +..|.+.|||+++
T Consensus 20 ~msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k---~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~ 91 (144)
T 3l9b_A 20 HMALIVHLKTVSELR-----GRADRIAKVTFRGQS---FYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK 91 (144)
T ss_dssp CEEEEEEEEEEESCC-----SCEEEEEEEEETTEE---EECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT
T ss_pred cEEEEEEEEEecCCC-----CCCCCeEEEEEeccc---eeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc
Confidence 356999999999998 578999999997654 4999998 6999999999999998543 6799999999999
Q ss_pred CCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEEec
Q 012089 340 VGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPF 395 (471)
Q Consensus 340 ~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p~ 395 (471)
+++|++||++.++|.++..+.....+..|... .+....++|.++++|.|.
T Consensus 92 v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~------n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 92 VFSNKLIGTFRMVLQKVVEENRVEVSDTLIDD------NNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp TSCCEEEEEEEEESHHHHHHSEEEEEEEEECT------TSCEEEEEEEEEEEEEET
T ss_pred ccCCCEEEEEEEEhHHhccCCeEEEeecccCC------CCCccccEEEEEEEecCC
Confidence 99999999999999999887766666666442 234455899999999994
No 39
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.66 E-value=2.7e-16 Score=164.97 Aligned_cols=121 Identities=26% Similarity=0.417 Sum_probs=103.1
Q ss_pred cCCceEEEEEEEEccccccCccCCCCCcEEEEEEcCccccceeeeeecCCCCCeEeeEEEEEeecCCCCeEEEEEEEcCC
Q 012089 260 KKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDK 339 (471)
Q Consensus 260 ~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~v~v~d~d~ 339 (471)
....|.|+|+|++|++|+.+|..|.+||||++++++.. ++|+++++|+||.|||+|.|.+..+....|+|+|||+|.
T Consensus 383 ~~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~---~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~ 459 (510)
T 3jzy_A 383 TSGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQS---YTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQ 459 (510)
T ss_dssp ---CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEE---EECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCS
T ss_pred CCCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCee---ccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCC
Confidence 34679999999999999999999999999999997654 599999999999999999999987777889999999999
Q ss_pred CCCCCeeEEEEEECcccCCCCc----eEEEEecccccCCCCCCCCccceEEEEEEEEE
Q 012089 340 VGGHDRLGMQLVPLKLLTPHET----KEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (471)
Q Consensus 340 ~~~d~~lG~~~i~L~~l~~~~~----~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~ 393 (471)
+++|++||++.++|.++..+.. ...|+++. +...|+|++++.+.
T Consensus 460 ~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~----------~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 460 FSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLH----------EVPTGEVWVRFDLQ 507 (510)
T ss_dssp SSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECB----------SSSSCEEEEEEEEE
T ss_pred CCCCCceEEEEEEHHHhccccCCCCceeeeecCC----------CCCCceEEEEEEEE
Confidence 9999999999999999876433 45677653 34679999888764
No 40
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.61 E-value=2.5e-15 Score=133.64 Aligned_cols=89 Identities=18% Similarity=0.283 Sum_probs=74.3
Q ss_pred CCceEEEEEEEEccccccCccCCCCCcEEEEEEcCccccceeeeeec-CCCCCeEeeEEEEEeecCCCCeEEEEEEEcCC
Q 012089 261 KPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKK-KNLNPEWNENFKLVVKEPESQILQLQVFDWDK 339 (471)
Q Consensus 261 ~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~kT~v~~-~t~nP~wne~f~f~v~~~~~~~L~v~v~d~d~ 339 (471)
.+.+.|+|+|++|++++ ..|.+||||+++ . +. .+|++++ ++.||.|||+|.|.+.+. ...|.|+|||+|
T Consensus 11 g~~~~L~V~V~~A~~l~---~~g~~DPYV~v~-~-~~---~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d- 80 (167)
T 2cjs_A 11 GILSLLCVGVKKAKFDG---AQEKFNTYVTLK-V-QN---VESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG- 80 (167)
T ss_dssp SCCCEEEEEEEEEECSS---CGGGCEEEEEEE-E-TT---EEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECC-
T ss_pred CceEEEEEEEEEEECCC---CCCCCCeEEEEE-e-cc---eEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECC-
Confidence 35789999999999884 268899999999 2 22 3565554 699999999999999864 457999999999
Q ss_pred CCCCCeeEEEEEECcccCCC
Q 012089 340 VGGHDRLGMQLVPLKLLTPH 359 (471)
Q Consensus 340 ~~~d~~lG~~~i~L~~l~~~ 359 (471)
+++|++||++.++|.++...
T Consensus 81 ~~~dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 81 LIWDTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp SSCCEEEEEEEEEGGGSCBC
T ss_pred CCCCceEEEEEEEHHHhccc
Confidence 88999999999999998643
No 41
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.59 E-value=2.4e-15 Score=161.60 Aligned_cols=109 Identities=28% Similarity=0.453 Sum_probs=98.7
Q ss_pred CCceEEEEEEEEcccccc---CccCCCCCcEEEEEEcCccccceeeeeecCCCCCeEeeEEEEEeecCCCCeEEEEEEEc
Q 012089 261 KPVGILHVKVVRASKLLK---KDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDW 337 (471)
Q Consensus 261 ~~~G~L~V~v~~a~~L~~---~d~~g~~DPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~v~v~d~ 337 (471)
.+.|.|+|+|++|++|+. +|..|.+||||++++.+.....++|+++++++||+|||+|.|.+.....+.|+|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 567999999999999998 88889999999999997655567999999999999999999999876678999999999
Q ss_pred CCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 012089 338 DKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (471)
Q Consensus 338 d~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~ 370 (471)
|.++ |++||++.++|.++..+.....|++|..
T Consensus 95 D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 95 NYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp CSSS-CEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred CCCC-CceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 9998 9999999999999988877788888743
No 42
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.55 E-value=3.4e-14 Score=137.52 Aligned_cols=110 Identities=35% Similarity=0.492 Sum_probs=90.9
Q ss_pred CCceEEEEEEEEccccccCccCCCCCcEEEEEEcC--ccccceeeeeecCCCCCeEeeEEEEEeecCC--CCeEEEEEEE
Q 012089 261 KPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTG--EKLPWKKTTVKKKNLNPEWNENFKLVVKEPE--SQILQLQVFD 336 (471)
Q Consensus 261 ~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~~~L~v~v~d 336 (471)
...|.|+|+|++|++|+.+|..|.+||||++++.+ .....++|+++++|+||.|||+|.|.+.... ...|.|+|||
T Consensus 147 p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d 226 (284)
T 2r83_A 147 PTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLD 226 (284)
T ss_dssp TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEE
T ss_pred CcCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEe
Confidence 45689999999999999999999999999999964 2334568999999999999999999987543 4579999999
Q ss_pred cCCCCCCCeeEEEEEECccc------------CCCCceEEEEeccc
Q 012089 337 WDKVGGHDRLGMQLVPLKLL------------TPHETKEFTLDLLK 370 (471)
Q Consensus 337 ~d~~~~d~~lG~~~i~L~~l------------~~~~~~~~~~~l~~ 370 (471)
++.+++|++||++.+++..+ .++.....|+.|..
T Consensus 227 ~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~ 272 (284)
T 2r83_A 227 YDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 272 (284)
T ss_dssp CCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBC
T ss_pred CCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCC
Confidence 99999999999999999763 23344566777644
No 43
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.54 E-value=4.7e-14 Score=150.21 Aligned_cols=124 Identities=23% Similarity=0.389 Sum_probs=100.6
Q ss_pred CceEEEEEEEEccccccCcc--CCCCCcEEEEEEcCc--cccceeeeeecCC-CCCeEeeEEEEEeecCCCCeEEEEEEE
Q 012089 262 PVGILHVKVVRASKLLKKDF--LGTSDPYVKLSLTGE--KLPWKKTTVKKKN-LNPEWNENFKLVVKEPESQILQLQVFD 336 (471)
Q Consensus 262 ~~G~L~V~v~~a~~L~~~d~--~g~~DPyv~v~l~~~--~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~~~~L~v~v~d 336 (471)
..+.|+|+|++|++|+..+. .+.+||||++.+.+. ....++|++++++ +||+|||+|.|.+..+....|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 57899999999999999874 689999999999653 2235689999987 999999999999987666789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEE
Q 012089 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (471)
Q Consensus 337 ~d~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~ 393 (471)
+|.+++|++||++.+||.++..+. .+++|.... ...-..|.|.+.++|.
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~-----g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSKN-----GDQHPSATLFVKISIQ 623 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECTT-----SCEEEEEEEEEEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCCC-----cCCCCceEEEEEEEEE
Confidence 999999999999999999998753 356664320 0112468888888874
No 44
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.46 E-value=1.8e-14 Score=140.49 Aligned_cols=99 Identities=34% Similarity=0.519 Sum_probs=85.7
Q ss_pred ccCCceEEEEEEEEccccccCccCCCCCcEEEEEEcC--ccccceeeeeecCCCCCeEeeEEEEEeecCC--CCeEEEEE
Q 012089 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTG--EKLPWKKTTVKKKNLNPEWNENFKLVVKEPE--SQILQLQV 334 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~~~L~v~v 334 (471)
+....|.|+|+|++|++|+.+|..|.+||||++++.+ .....++|+++++++||.|||+|.|.+.... ...|.|+|
T Consensus 147 y~~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 226 (296)
T 1dqv_A 147 YLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAV 226 (296)
T ss_dssp EETTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEE
T ss_pred eccccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEE
Confidence 3345799999999999999999999999999999973 3345679999999999999999999886432 45799999
Q ss_pred EEcCCCCCCCeeEEEEEECcccC
Q 012089 335 FDWDKVGGHDRLGMQLVPLKLLT 357 (471)
Q Consensus 335 ~d~d~~~~d~~lG~~~i~L~~l~ 357 (471)
||++.+++|++||++.+++.++.
T Consensus 227 ~d~d~~~~~~~iG~~~i~l~~~~ 249 (296)
T 1dqv_A 227 VDYDCIGHNEVIGVCRVGPEAAD 249 (296)
T ss_dssp EECCSSSCCEEEEECCCSSCTTC
T ss_pred EeCCCCCCCceEEEEEECCccCC
Confidence 99999999999999999998764
No 45
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.42 E-value=1.4e-14 Score=150.30 Aligned_cols=128 Identities=20% Similarity=0.240 Sum_probs=22.3
Q ss_pred CCceEEEEEEEEccccccCccCCCCCcEEEEEEcCccccceeeeeecCC---CCCeEeeEEEEEeecCCCCeEEEEEEEc
Q 012089 261 KPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKN---LNPEWNENFKLVVKEPESQILQLQVFDW 337 (471)
Q Consensus 261 ~~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~kT~v~~~t---~nP~wne~f~f~v~~~~~~~L~v~v~d~ 337 (471)
...|.|+|+|++|++|+++| ||||++++++... .||+++++| +||.|||+|.|.+... ...|.++|||+
T Consensus 8 r~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~--~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~ 79 (483)
T 3bxj_A 8 RVDNVLKLWIIEARELPPKK-----RYYCELCLDDMLY--ARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRD 79 (483)
T ss_dssp EEEECC----------------------------------------------------CCEECC----------------
T ss_pred eeccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEE--eeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEec
Confidence 34688999999999999876 9999999986533 489999999 9999999999986543 57899999994
Q ss_pred -C---CCCCCCeeEEEEEECcccCCCCceEEEEecccccCCC-----------------CCCCCccceEEEEEEEEEecc
Q 012089 338 -D---KVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNIS-----------------DPKDMKQRGKIVVELTYVPFK 396 (471)
Q Consensus 338 -d---~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~~~~~~-----------------~~~~~~~~G~l~l~l~y~p~~ 396 (471)
| ..++|++||++.+++.++..+...+.|++|....... .....+..|.|+++++|.+..
T Consensus 80 ~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~~ 159 (483)
T 3bxj_A 80 SDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTMS 159 (483)
T ss_dssp ---------------------------CCEECC--------------------------------------CEEEEEECC
T ss_pred CCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeeee
Confidence 4 3678999999999999999877778888885422100 001123569999999998743
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.27 E-value=6.3e-12 Score=136.04 Aligned_cols=108 Identities=34% Similarity=0.506 Sum_probs=92.5
Q ss_pred CceEEEEEEEEccccccCccCCCCCcEEEEEEcCc--cccceeeeeecCCCCCeEeeEEEEEeecCC-CCeEEEEEEEcC
Q 012089 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEPE-SQILQLQVFDWD 338 (471)
Q Consensus 262 ~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~--~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~~~L~v~v~d~d 338 (471)
..+.|+|++++|++|..+|.+|.+||||++++.+. ...+++|+++++|+||.|||+|.|.+.... ...|.++|||+|
T Consensus 170 ~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d 249 (674)
T 3pfq_A 170 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 249 (674)
T ss_dssp CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECC
T ss_pred ccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecc
Confidence 35889999999999999999999999999999543 234568999999999999999999987543 457999999999
Q ss_pred CCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 012089 339 KVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (471)
Q Consensus 339 ~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~ 370 (471)
..++|++||++.+++.++.... ...|+.+..
T Consensus 250 ~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls 280 (674)
T 3pfq_A 250 LTSRNDFMGSLSFGISELQKAG-VDGWFKLLS 280 (674)
T ss_dssp SSSCCEECCBCCCBTTHHHHCC-EEEEEECBC
T ss_pred cccccccccccccchhhhccCC-cccceeecc
Confidence 9999999999999999987654 467777654
No 47
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.18 E-value=8.9e-11 Score=128.18 Aligned_cols=119 Identities=18% Similarity=0.271 Sum_probs=90.7
Q ss_pred ceEEEEEEEEccccccCccCCCCCcEEEEEEcCc---cccceeeeeecC-CCCCeEee-EEEEE-eecCCCCeEEEEEEE
Q 012089 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE---KLPWKKTTVKKK-NLNPEWNE-NFKLV-VKEPESQILQLQVFD 336 (471)
Q Consensus 263 ~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~---~~~~~kT~v~~~-t~nP~wne-~f~f~-v~~~~~~~L~v~v~d 336 (471)
...|+|+|++|++|+.. .+||||+|.+.+. ...+++|+++++ ++||+||| +|.|. +..++...|+|+|||
T Consensus 724 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 34799999999999853 6899999999752 122358998875 59999999 69998 766666789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEEeccC
Q 012089 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFKE 397 (471)
Q Consensus 337 ~d~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p~~~ 397 (471)
+| |++||++.+||..|..+-. .++|... ....-..|.|.+.+.+..+..
T Consensus 800 ~d----ddfiG~~~lpL~~L~~GyR---~vpL~~~-----~g~~l~~atLfv~i~~~~~~~ 848 (885)
T 3ohm_B 800 EG----GKFVGHRILPVSAIRSGYH---YVCLRNE-----ANQPLCLPALLIYTEASDYIP 848 (885)
T ss_dssp TT----TEEEEEEEEETTTCCCEEE---EEEEECT-----TSCEEEEEEEEEEEEEEECCC
T ss_pred CC----ccEEeeEEEEHHHcCCCce---EEEecCC-----CCCccCceEEEEEEEEEecCC
Confidence 87 7899999999999987632 3444331 111225789999999886543
No 48
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.16 E-value=1.2e-10 Score=127.07 Aligned_cols=115 Identities=21% Similarity=0.309 Sum_probs=87.0
Q ss_pred CceEEEEEEEEccccccCccCCCCCcEEEEEEcCc---cccceeee-eec-CCCCCeEee-EEEE-EeecCCCCeEEEEE
Q 012089 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE---KLPWKKTT-VKK-KNLNPEWNE-NFKL-VVKEPESQILQLQV 334 (471)
Q Consensus 262 ~~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~---~~~~~kT~-v~~-~t~nP~wne-~f~f-~v~~~~~~~L~v~v 334 (471)
..|.|+|+|++|++|+. +.+||||++.+.+. ...+++|+ +++ +++||+||| +|.| .+..++...|+|+|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 36799999999999985 46899999999642 22346898 776 569999999 7999 78766666899999
Q ss_pred EEcCCCCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEE
Q 012089 335 FDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTY 392 (471)
Q Consensus 335 ~d~d~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y 392 (471)
||++ +++||++.+||..|..+. .+++|.... ...-..+.|.+.+.+
T Consensus 752 ~D~d----~d~iG~~~ipl~~L~~G~---r~v~L~~~~-----g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 752 MEEG----NKFLGHRIIPINALNSGY---HHLCLHSES-----NMPLTMPALFIFLEM 797 (799)
T ss_dssp EETT----TEEEEEEEEEGGGBCCEE---EEEEEECTT-----CCEEEEEEEEEEEEE
T ss_pred EEeC----CCccceEeeehhhcCCCc---EEEeccCCC-----CCCCCceEEEEEEEE
Confidence 9996 789999999999998653 345553310 011235777787766
No 49
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.15 E-value=2.1e-10 Score=124.59 Aligned_cols=118 Identities=18% Similarity=0.309 Sum_probs=89.7
Q ss_pred ceEEEEEEEEccccccCccCCCCCcEEEEEEcCccc----cceeeeeecC-CCCCeEeeE-EEEE-eecCCCCeEEEEEE
Q 012089 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKL----PWKKTTVKKK-NLNPEWNEN-FKLV-VKEPESQILQLQVF 335 (471)
Q Consensus 263 ~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~----~~~kT~v~~~-t~nP~wne~-f~f~-v~~~~~~~L~v~v~ 335 (471)
.+.|+|+|++|++|+.. .+||||++.+.+... .+++|+++++ ++||+|||+ |.|. +..++...|+|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 47899999999999853 689999999976321 3458998875 699999998 9998 76666678999999
Q ss_pred EcCCCCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEEecc
Q 012089 336 DWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFK 396 (471)
Q Consensus 336 d~d~~~~d~~lG~~~i~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p~~ 396 (471)
|++ +++||++.+||..|..+- ..++|... ....-..++|.+.+.+....
T Consensus 725 D~d----ddfiG~~~ipL~~L~~Gy---R~vpL~~~-----~g~~~~~atLfv~i~~~~~~ 773 (816)
T 3qr0_A 725 EEN----GKFIGHRVMPLDGIKPGY---RHVPLRNE-----SNRPLGLASVFAHIVAKDYV 773 (816)
T ss_dssp ETT----SCEEEEEEEESTTCCCEE---EEEEEECT-----TSCEEEEEEEEEEEEEEECC
T ss_pred ecC----CCeeeEEEEEHHHcCCcc---eEEEEeCC-----CCCCCCceEEEEEEEEEecC
Confidence 985 789999999999998763 23455332 11122347888888877543
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.06 E-value=2.4e-09 Score=87.76 Aligned_cols=111 Identities=20% Similarity=0.358 Sum_probs=85.3
Q ss_pred ceEEEEEEEEcc--ccccCccCCCCCcEEEEEEcCcccc-ceee-eeecCCCCCeEeeEEEEEeecCCCCeEEEEEEEcC
Q 012089 263 VGILHVKVVRAS--KLLKKDFLGTSDPYVKLSLTGEKLP-WKKT-TVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWD 338 (471)
Q Consensus 263 ~G~L~V~v~~a~--~L~~~d~~g~~DPyv~v~l~~~~~~-~~kT-~v~~~t~nP~wne~f~f~v~~~~~~~L~v~v~d~d 338 (471)
.+.|+|.+.++. .|++ .....||||.+.+...... ..+| ..+++|.+|.|||+|.-.+.+ ++.|.+.|++..
T Consensus 5 ~~flRi~~~~~~~~~~~~--~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a 80 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQA--EDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAA 80 (126)
T ss_dssp CCEEEEEEEEEECSSCCC--SSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEET
T ss_pred CccEEeeeccccccccCC--ccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCC
Confidence 356888876654 3332 2246899999999754322 3355 778899999999999999875 578999999665
Q ss_pred CCCCCCeeEEEEEECcccC-----CCCceEEEEecccccCCCCCCCCccceEEEEEEEEE
Q 012089 339 KVGGHDRLGMQLVPLKLLT-----PHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (471)
Q Consensus 339 ~~~~d~~lG~~~i~L~~l~-----~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~ 393 (471)
. +++..|.+++++|. .+...+.|++| ++.|+|++.+.|+
T Consensus 81 ~----~fvAn~tV~~edL~~~c~~~~g~~e~WvdL------------eP~Gkl~~~i~~~ 124 (126)
T 1yrk_A 81 E----EPVSEVTVGVSVLAERCKKNNGKAEFWLDL------------QPQAKVLMSVQYF 124 (126)
T ss_dssp T----EEEEEEEEEHHHHHHHHHTTTTEEEEEEEC------------BSSCEEEEEEEEE
T ss_pred C----CeeeEEEEEHHHHHhhhccCCCceEEEEec------------ccCcEEEEEEEEe
Confidence 3 89999999999998 34556899887 4589999999987
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.97 E-value=3.9e-09 Score=87.68 Aligned_cols=115 Identities=17% Similarity=0.245 Sum_probs=87.1
Q ss_pred CceEEEEEEEEccccccCc-cCCCCCcEEEEEEcCccc-cceee-eeecCCCCCeEeeEEEEEeecCCCCeEEEEEEEcC
Q 012089 262 PVGILHVKVVRASKLLKKD-FLGTSDPYVKLSLTGEKL-PWKKT-TVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWD 338 (471)
Q Consensus 262 ~~G~L~V~v~~a~~L~~~d-~~g~~DPyv~v~l~~~~~-~~~kT-~v~~~t~nP~wne~f~f~v~~~~~~~L~v~v~d~d 338 (471)
..+.|+|.+.++.--+-.. .....||||.+.+..... ...+| ..+++|..|+|||+|.-.+.+ .+.|.|.|++..
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a 85 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKN 85 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSS
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCC
Confidence 3467888886655322211 123589999999975432 23577 778889999999999988875 578999999554
Q ss_pred CCCCCCeeEEEEEECcccC-----CCCceEEEEecccccCCCCCCCCccceEEEEEEEEEe
Q 012089 339 KVGGHDRLGMQLVPLKLLT-----PHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVP 394 (471)
Q Consensus 339 ~~~~d~~lG~~~i~L~~l~-----~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p 394 (471)
. +++..|.+++.+|. .+...+.|++| ++.|+|++.+.|.-
T Consensus 86 ~----~fVAn~tV~~edL~~~ck~~~g~~e~WvdL------------eP~Gkl~v~i~~~~ 130 (138)
T 2enj_A 86 V----DLISETTVELYSLAERCRKNNGKTEIWLEL------------KPQGRMLMNARYFL 130 (138)
T ss_dssp C----SCCEEEEEESHHHHHHHHHTTTCEEEEEEC------------BSSCEEEEEEEECC
T ss_pred C----CeeeEEEEEHHHHHhhhccCCCceEEEEec------------ccCcEEEEEEEEEE
Confidence 3 89999999999998 44566899987 45899999999963
No 52
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.84 E-value=9.5e-09 Score=88.87 Aligned_cols=60 Identities=30% Similarity=0.350 Sum_probs=51.2
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCCC----------CCCCc
Q 012089 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE----------NHNNP 449 (471)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~~----------~~~dp 449 (471)
....|+|++++.|.| ..+.|.|+|++|+||+.. +.+||
T Consensus 9 ~~~~G~l~~~l~y~~--------------------------------~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dp 56 (147)
T 2enp_A 9 KYQLGMLHFSTQYDL--------------------------------LHNHLTVRVIEARDLPPPISHDGSRQDMAHSNP 56 (147)
T ss_dssp CCCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCC
T ss_pred CCcceEEEEEEEEcC--------------------------------CCCEEEEEEEEEeCCCCccccccccccCCCCCc
Confidence 567899999999987 568999999999999973 47999
Q ss_pred EEEEEEcC---eeeeeC---CCCCCcCC
Q 012089 450 YAIILYKG---DKKRTK---KNSRPCLE 471 (471)
Q Consensus 450 yv~v~~~~---~~~kTk---~t~nP~Wn 471 (471)
||++++.. .++||+ +|.||+||
T Consensus 57 yv~v~l~~~~~~~~kT~v~~~t~nP~wn 84 (147)
T 2enp_A 57 YVKICLLPDQKNSKQTGVKRKTQKPVFE 84 (147)
T ss_dssp EEEEEEETCCSSCEECCCCCSCSSCCCC
T ss_pred EEEEEEEeCCCcceEeecccCCCCCeEe
Confidence 99999974 344776 89999998
No 53
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=98.82 E-value=5.3e-09 Score=89.65 Aligned_cols=60 Identities=28% Similarity=0.430 Sum_probs=50.8
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCCC---CCCCcEEEEEEc
Q 012089 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK 456 (471)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~~---~~~dpyv~v~~~ 456 (471)
+...|+|++++.|.+ ..+.|.|+|++|+||+.. +.+||||++++.
T Consensus 4 ~~~~G~i~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~ 51 (141)
T 1v27_A 4 GSSGGQLSIKLWFDK--------------------------------VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFL 51 (141)
T ss_dssp CCCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCCSSSCCCCEEEECCCS
T ss_pred CCcccEEEEEEEEeC--------------------------------CCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEe
Confidence 567899999999987 468999999999999873 579999999983
Q ss_pred -----CeeeeeC---CCCCCcCC
Q 012089 457 -----GDKKRTK---KNSRPCLE 471 (471)
Q Consensus 457 -----~~~~kTk---~t~nP~Wn 471 (471)
..++||+ +|.||+||
T Consensus 52 ~~~~~~~~~kT~~~~~t~nP~wn 74 (141)
T 1v27_A 52 PDRSDKNKRRTKTVKKTLEPKWN 74 (141)
T ss_dssp SCCSSSSCCBCCCCSSCSSCCCC
T ss_pred cCCCCCcceeCccccCCCCCccc
Confidence 3344776 99999998
No 54
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.81 E-value=6.1e-09 Score=87.85 Aligned_cols=58 Identities=29% Similarity=0.459 Sum_probs=49.4
Q ss_pred cceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCCC---CCCCcEEEEEEc--
Q 012089 382 QRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK-- 456 (471)
Q Consensus 382 ~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~~---~~~dpyv~v~~~-- 456 (471)
..|+|.+++.|.+ ..+.|.|+|++|+||+.. +.+||||++++.
T Consensus 3 ~~G~l~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~ 50 (129)
T 2bwq_A 3 LSGQLSIKLWFDK--------------------------------VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPD 50 (129)
T ss_dssp CCCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESS
T ss_pred eeEEEEEEEEEcc--------------------------------CCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecC
Confidence 4799999999987 468999999999999873 579999999993
Q ss_pred ---CeeeeeC---CCCCCcCC
Q 012089 457 ---GDKKRTK---KNSRPCLE 471 (471)
Q Consensus 457 ---~~~~kTk---~t~nP~Wn 471 (471)
..++||+ +|.||+||
T Consensus 51 ~~~~~~~kT~v~~~t~nP~wn 71 (129)
T 2bwq_A 51 RSDKNKRRTKTVKKTLEPKWN 71 (129)
T ss_dssp CSGGGEEECCCCSSBSSCEEE
T ss_pred CCCCcceecccccCCCCCccc
Confidence 3445777 89999997
No 55
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.79 E-value=1.4e-08 Score=87.07 Aligned_cols=60 Identities=23% Similarity=0.345 Sum_probs=50.7
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCCC---CCCCcEEEEEEc
Q 012089 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK 456 (471)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~~---~~~dpyv~v~~~ 456 (471)
....|+|++++.|.+ ..+.|.|+|++|+||+.. +.+||||++++.
T Consensus 9 ~~~~G~l~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~ 56 (141)
T 2d8k_A 9 RENLGRIQFSVGYNF--------------------------------QESTLTVKIMKAQELPAKDFSGTSDPFVKIYLL 56 (141)
T ss_dssp CCCCCEEEEEEEECS--------------------------------SSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEE
T ss_pred CceeeEEEEEEEEeC--------------------------------CCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEE
Confidence 456899999999986 467999999999999973 579999999995
Q ss_pred C---eeeeeC---CCCCCcCC
Q 012089 457 G---DKKRTK---KNSRPCLE 471 (471)
Q Consensus 457 ~---~~~kTk---~t~nP~Wn 471 (471)
+ .+.||+ +|.||+||
T Consensus 57 ~~~~~~~kT~v~~~t~nP~wn 77 (141)
T 2d8k_A 57 PDKKHKLETKVKRKNLNPHWN 77 (141)
T ss_dssp SCCSSEEECCCCTTCSSCCCC
T ss_pred CCCCccEeCceEcCCCCCccc
Confidence 3 344777 89999998
No 56
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=98.78 E-value=8.8e-09 Score=88.47 Aligned_cols=60 Identities=20% Similarity=0.292 Sum_probs=50.6
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEc
Q 012089 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYK 456 (471)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~---~~~~dpyv~v~~~ 456 (471)
....|+|.+++.|.+ ..+.|.|+|++|+||+. .+.+||||++++.
T Consensus 12 ~~~~G~l~~~l~y~~--------------------------------~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~ 59 (142)
T 2chd_A 12 ATTLGALEFSLLYDQ--------------------------------DNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLL 59 (142)
T ss_dssp --CCCEEEEEEEEEG--------------------------------GGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEE
T ss_pred CCccceEEEEEEEeC--------------------------------CCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEE
Confidence 456899999999987 57899999999999997 3579999999997
Q ss_pred C-----eeeeeC---CCCCCcCC
Q 012089 457 G-----DKKRTK---KNSRPCLE 471 (471)
Q Consensus 457 ~-----~~~kTk---~t~nP~Wn 471 (471)
+ .++||+ +|.||+||
T Consensus 60 ~~~~~~~~~kT~v~~~t~nP~wn 82 (142)
T 2chd_A 60 PGASKSNKLRTKTLRNTRNPVWN 82 (142)
T ss_dssp SCCSGGGEEECCCCCSCSSCEEE
T ss_pred cCCCCcceeeCCcCCCCCCCcCc
Confidence 5 445777 89999997
No 57
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=98.77 E-value=9.7e-09 Score=90.07 Aligned_cols=60 Identities=30% Similarity=0.526 Sum_probs=50.8
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCCC---CCCCcEEEEEEc
Q 012089 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK 456 (471)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~~---~~~dpyv~v~~~ 456 (471)
....|+|++++.|.| ..+.|.|+|++|+||+.. +.+||||++++.
T Consensus 8 ~~~~G~l~~~l~y~~--------------------------------~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~ 55 (159)
T 1tjx_A 8 LEKLGDICFSLRYVP--------------------------------TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLM 55 (159)
T ss_dssp GGCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEE
T ss_pred cCcCCeEEEEEEEcC--------------------------------CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEE
Confidence 457899999999987 468999999999999973 579999999996
Q ss_pred C-----eeeeeC---CCCCCcCC
Q 012089 457 G-----DKKRTK---KNSRPCLE 471 (471)
Q Consensus 457 ~-----~~~kTk---~t~nP~Wn 471 (471)
+ .++||+ +|+||+||
T Consensus 56 ~~~~~~~~~kT~v~~~t~nP~wn 78 (159)
T 1tjx_A 56 QNGKRLKKKKTTIKKNTLNPYYN 78 (159)
T ss_dssp ETTEEEEEEECCCCCSCSSCEEE
T ss_pred eCCceeceeeCceecCCCCCccc
Confidence 3 234776 89999997
No 58
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=98.77 E-value=1.2e-08 Score=87.25 Aligned_cols=60 Identities=18% Similarity=0.274 Sum_probs=51.2
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCCC----CCCCcEEEEEE
Q 012089 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE----NHNNPYAIILY 455 (471)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~~----~~~dpyv~v~~ 455 (471)
....|+|.+++.|.+ ..+.|.|+|++|+||+.. +.+||||++++
T Consensus 5 ~~~~G~l~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~ 52 (138)
T 1ugk_A 5 SSGLGTLFFSLEYNF--------------------------------ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTI 52 (138)
T ss_dssp CCCCCEEEEEEEEEG--------------------------------GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEE
T ss_pred CCccEEEEEEEEEEC--------------------------------CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEE
Confidence 456899999999987 468999999999999972 57999999999
Q ss_pred cC---eeeeeC---CCCCCcCC
Q 012089 456 KG---DKKRTK---KNSRPCLE 471 (471)
Q Consensus 456 ~~---~~~kTk---~t~nP~Wn 471 (471)
.+ ++.||+ +|.||+||
T Consensus 53 ~~~~~~~~kT~v~~~t~nP~wn 74 (138)
T 1ugk_A 53 LPEKKHKVKTRVLRKTLDPAFD 74 (138)
T ss_dssp ETTTCSEEECCCCSSCSSCEEE
T ss_pred ecCCCceEecCcCcCCCCCcEe
Confidence 64 445777 99999997
No 59
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=98.76 E-value=1.4e-08 Score=89.78 Aligned_cols=60 Identities=27% Similarity=0.443 Sum_probs=51.6
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEc
Q 012089 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYK 456 (471)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~---~~~~dpyv~v~~~ 456 (471)
....|+|++++.|.+ ..+.|.|+|++|+||+. .+.+||||++++.
T Consensus 20 ~~~~G~l~~~l~y~~--------------------------------~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~ 67 (166)
T 2cm5_A 20 IEERGKILVSLMYST--------------------------------QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLK 67 (166)
T ss_dssp CCCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEE
T ss_pred cCccceEEEEEEEEC--------------------------------CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEE
Confidence 457899999999987 46899999999999987 3679999999998
Q ss_pred C-----eeeeeC---CCCCCcCC
Q 012089 457 G-----DKKRTK---KNSRPCLE 471 (471)
Q Consensus 457 ~-----~~~kTk---~t~nP~Wn 471 (471)
+ .++||+ +|+||+||
T Consensus 68 ~~~~~~~~~kT~v~~~t~nP~wn 90 (166)
T 2cm5_A 68 PDMGKKAKHKTQIKKKTLNPEFN 90 (166)
T ss_dssp TC---CCEEECCCCCSCSSCEEE
T ss_pred CCCCccceEeCCcccCCCCCccc
Confidence 6 344777 99999997
No 60
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.76 E-value=1.5e-08 Score=87.01 Aligned_cols=59 Identities=17% Similarity=0.350 Sum_probs=49.9
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEc
Q 012089 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYK 456 (471)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~---~~~~dpyv~v~~~ 456 (471)
....|+|++++.|.+ ..+.|.|+|++|+||+. .+ +||||++++.
T Consensus 7 ~~~~G~l~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~ 53 (142)
T 2dmg_A 7 GSPLGQIQLTIRHSS--------------------------------QRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLL 53 (142)
T ss_dssp SCSSCEEEEEEEEET--------------------------------TTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEE
T ss_pred CCCcceEEEEEEEeC--------------------------------CCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEE
Confidence 466899999999987 46899999999999996 35 9999999995
Q ss_pred C-----eeeeeC---CCCCCcCC
Q 012089 457 G-----DKKRTK---KNSRPCLE 471 (471)
Q Consensus 457 ~-----~~~kTk---~t~nP~Wn 471 (471)
. .++||+ +|+||+||
T Consensus 54 ~~~~~~~~~kT~v~~~t~nP~wn 76 (142)
T 2dmg_A 54 PDKRRSGRRKTHVSKKTLNPVFD 76 (142)
T ss_dssp SCCCSSSCEECCCCCSCSSCEEE
T ss_pred cCCCCCCcccCCccCCCCCCCcC
Confidence 3 334776 89999997
No 61
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=98.74 E-value=6.7e-09 Score=90.81 Aligned_cols=60 Identities=10% Similarity=0.130 Sum_probs=50.5
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEc
Q 012089 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYK 456 (471)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~---~~~~dpyv~v~~~ 456 (471)
....|+|++++.|.+ ..+.|.|.|++|+||+. .+.+||||++++.
T Consensus 26 ~~~~G~l~~sl~y~~--------------------------------~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~ 73 (155)
T 2z0u_A 26 AVGATRIQIALKYDE--------------------------------KNKQFAILIIQLSNLSALLQQQDQKVNIRVAVL 73 (155)
T ss_dssp --CCEEEEEEEEEET--------------------------------TTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEE
T ss_pred cCCcEEEEEEEEEcC--------------------------------CCCEEEEEEEEccCcCCcccCCCCCEEEEEEEe
Confidence 356799999999987 46899999999999986 4689999999997
Q ss_pred C---e---eeeeC---CCCCCcCC
Q 012089 457 G---D---KKRTK---KNSRPCLE 471 (471)
Q Consensus 457 ~---~---~~kTk---~t~nP~Wn 471 (471)
+ + ++||+ +|+||+||
T Consensus 74 ~~~~~~~~~~kT~v~~~tlnP~wn 97 (155)
T 2z0u_A 74 PCSESTTCLFRTRPLDASDTLVFN 97 (155)
T ss_dssp SCSCHHHHEEECCCEECCSSEEEE
T ss_pred cCCCCCccceeCCcCCCCCCCccc
Confidence 6 3 45787 99999997
No 62
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=98.74 E-value=1.2e-08 Score=87.04 Aligned_cols=57 Identities=26% Similarity=0.493 Sum_probs=49.0
Q ss_pred ceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEcCe-
Q 012089 383 RGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYKGD- 458 (471)
Q Consensus 383 ~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~---~~~~dpyv~v~~~~~- 458 (471)
+|+|.+++.|.+ ..+.|.|+|++|+||+. .+.+||||++++.+.
T Consensus 2 ~G~l~~sl~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~ 49 (138)
T 3n5a_A 2 RGELLLSLCYNP--------------------------------SANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKD 49 (138)
T ss_dssp CCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETT
T ss_pred CcEEEEEEEEcC--------------------------------CCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCC
Confidence 699999999987 56899999999999987 357999999999742
Q ss_pred ----eeeeC---CCCCCcCC
Q 012089 459 ----KKRTK---KNSRPCLE 471 (471)
Q Consensus 459 ----~~kTk---~t~nP~Wn 471 (471)
++||+ +|.||+||
T Consensus 50 ~~~~~~kT~~~~~t~nP~wn 69 (138)
T 3n5a_A 50 KRVEKKKTVTKKRNLNPIFN 69 (138)
T ss_dssp EEEEEEECCCCSSCSSCEEE
T ss_pred CccceEeCccccCCCCCcCc
Confidence 34776 88999997
No 63
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=98.72 E-value=1.3e-08 Score=88.63 Aligned_cols=61 Identities=15% Similarity=0.223 Sum_probs=49.3
Q ss_pred CCccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCCC--CCCCcEEEEEEc
Q 012089 379 DMKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE--NHNNPYAIILYK 456 (471)
Q Consensus 379 ~~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~~--~~~dpyv~v~~~ 456 (471)
.....|++.++++|.+ ..+.|.|+|++|+||+.. +.+||||++++.
T Consensus 9 ~~~~~G~~~lsL~y~~--------------------------------~~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~ 56 (153)
T 3fbk_A 9 SHKVQGAGQLRLSIDA--------------------------------QDRVLLLHIIEGKGLISKQPGTCDPYVKISLI 56 (153)
T ss_dssp ----CCCCEEEEEEEE--------------------------------SSSEEEEEEEEEESCCCCSSSCCCEEEEEEEE
T ss_pred ccCCCCEEEEEEEEEC--------------------------------CCCEEEEEEEEeeCCCCCCCCCCCEEEEEEEE
Confidence 3567899999999998 578999999999999873 689999999994
Q ss_pred C-----eeeeeC---CCCCCcCC
Q 012089 457 G-----DKKRTK---KNSRPCLE 471 (471)
Q Consensus 457 ~-----~~~kTk---~t~nP~Wn 471 (471)
. .+.||+ +|+||+||
T Consensus 57 ~~~~~~~~~kT~v~~~t~nP~wn 79 (153)
T 3fbk_A 57 PEDSRLRHQKTQTVPDCRDPAFH 79 (153)
T ss_dssp SCSCCTTCEECCCCTTCSSCEEE
T ss_pred cCCCCccEEeccccCCCCCCccc
Confidence 3 234776 89999997
No 64
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=98.72 E-value=1.7e-08 Score=87.46 Aligned_cols=60 Identities=23% Similarity=0.374 Sum_probs=50.7
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC----CCCCCcEEEEEE
Q 012089 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG----ENHNNPYAIILY 455 (471)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~----~~~~dpyv~v~~ 455 (471)
...+|+|.+++.|.+ ..+.|.|+|++|+||+. .+.+||||++++
T Consensus 6 ~~~~G~l~~sl~y~~--------------------------------~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l 53 (148)
T 3fdw_A 6 IFVTGRIAFSLKYEQ--------------------------------QTQSLVVHVKECHQLAYADEAKKRSNPYVKTYL 53 (148)
T ss_dssp CCCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEE
T ss_pred CccceEEEEEEEEeC--------------------------------CCCEEEEEEEEecCCCCcccCCCCCCeEEEEEE
Confidence 457899999999987 57899999999999985 367999999999
Q ss_pred cCe-----eeeeC---CCCCCcCC
Q 012089 456 KGD-----KKRTK---KNSRPCLE 471 (471)
Q Consensus 456 ~~~-----~~kTk---~t~nP~Wn 471 (471)
... ++||+ +|+||+||
T Consensus 54 ~~~~~~~~~~kT~v~~~t~nP~wn 77 (148)
T 3fdw_A 54 LPDKSRQGKRKTSIKRDTVNPLYD 77 (148)
T ss_dssp ETCCSGGGEEECCCCSSCSSCEEE
T ss_pred EcCCcccCccccccCCCCCCCcEe
Confidence 732 44776 89999997
No 65
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=98.71 E-value=3.3e-08 Score=84.56 Aligned_cols=60 Identities=17% Similarity=0.038 Sum_probs=50.5
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCCCCCCCcEEEEEEcC--
Q 012089 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGENHNNPYAIILYKG-- 457 (471)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~~~~~dpyv~v~~~~-- 457 (471)
....|+|++++.|.+ ..+.|.|+|++|++.+..+.+||||++++..
T Consensus 9 ~~~~G~l~~sl~y~~--------------------------------~~~~L~V~v~~a~~~d~~g~sDPyv~v~l~~~~ 56 (138)
T 1wfm_A 9 WNQAPKLHYCLDYDC--------------------------------QKAELFVTRLEAVTSNHDGGCDCYVQGSVANRT 56 (138)
T ss_dssp CSSCCEEEEEEEEET--------------------------------TTTEEEEEEEEEECCCCSSCCCEEEEEEEEETT
T ss_pred CCcceEEEEEEEEeC--------------------------------CCCEEEEEEEEEEcCCCCCCcceEEEEEEEcCC
Confidence 456899999999976 4689999999999877778999999999942
Q ss_pred e--eeeeC---CCCCCcCC
Q 012089 458 D--KKRTK---KNSRPCLE 471 (471)
Q Consensus 458 ~--~~kTk---~t~nP~Wn 471 (471)
. ++||+ +|+||+||
T Consensus 57 ~~~~~kT~v~~~tlnP~wn 75 (138)
T 1wfm_A 57 GSVEAQTALKKRQLHTTWE 75 (138)
T ss_dssp EEEEEECCCCCCCSSEECS
T ss_pred CcccEecccCcCCCCCcCC
Confidence 2 24776 99999998
No 66
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.71 E-value=2.1e-08 Score=87.29 Aligned_cols=60 Identities=23% Similarity=0.298 Sum_probs=50.2
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCCC---CCCCcEEEEEEc
Q 012089 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK 456 (471)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~~---~~~dpyv~v~~~ 456 (471)
....|+|++++.|.+ ..+.|.|+|++|+||+.. +.+||||++++.
T Consensus 25 ~~~~G~l~~~l~y~~--------------------------------~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~ 72 (152)
T 1rsy_A 25 EEKLGKLQYSLDYDF--------------------------------QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLL 72 (152)
T ss_dssp -CCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEE
T ss_pred CCCceEEEEEEEEeC--------------------------------CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEE
Confidence 456899999999987 468999999999999973 579999999995
Q ss_pred C---eeeeeC---CCCCCcCC
Q 012089 457 G---DKKRTK---KNSRPCLE 471 (471)
Q Consensus 457 ~---~~~kTk---~t~nP~Wn 471 (471)
. ++.||+ +|.||+||
T Consensus 73 ~~~~~~~kT~v~~~t~nP~wn 93 (152)
T 1rsy_A 73 PDKKKKFETKVHRKTLNPVFN 93 (152)
T ss_dssp TTCCSCEECCCCTTCSSCEEE
T ss_pred cCCCceEeccccCCCCCCcCc
Confidence 3 344777 88999997
No 67
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=98.68 E-value=2.7e-08 Score=85.53 Aligned_cols=60 Identities=23% Similarity=0.321 Sum_probs=50.6
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCCC---CCCCcEEEEEEc
Q 012089 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK 456 (471)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~~---~~~dpyv~v~~~ 456 (471)
....|+|++++.|.+ ..+.|.|+|++|+||+.. +.+||||++++.
T Consensus 17 ~~~~G~l~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~ 64 (143)
T 3f04_A 17 VEKLGKLQYSLDYDF--------------------------------QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLL 64 (143)
T ss_dssp CCCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEE
T ss_pred ccCeEEEEEEEEEeC--------------------------------CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEE
Confidence 356899999999987 578999999999999973 589999999994
Q ss_pred ---CeeeeeC---CCCCCcCC
Q 012089 457 ---GDKKRTK---KNSRPCLE 471 (471)
Q Consensus 457 ---~~~~kTk---~t~nP~Wn 471 (471)
.++.||+ +|.||+||
T Consensus 65 ~~~~~~~kT~v~~~t~nP~wn 85 (143)
T 3f04_A 65 PDKKKKFETKVHRKTLNPVFN 85 (143)
T ss_dssp SCCSCCEECCCCCSCSSCEEE
T ss_pred CCCCccEECccCcCCCCCcCc
Confidence 3345777 89999997
No 68
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=98.68 E-value=2.5e-08 Score=86.77 Aligned_cols=60 Identities=23% Similarity=0.376 Sum_probs=47.1
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEc
Q 012089 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYK 456 (471)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~---~~~~dpyv~v~~~ 456 (471)
....|+|.+++.|.| ..+.|.|+|++|+||+. .+.+||||++++.
T Consensus 13 ~~~~G~l~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~ 60 (153)
T 1w15_A 13 PSGRGELLVSLCYQS--------------------------------TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLY 60 (153)
T ss_dssp ---CCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCC------CCCEEEEEEEE
T ss_pred CccccEEEEEEEEcC--------------------------------CCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEE
Confidence 456899999999987 46899999999999996 3579999999994
Q ss_pred --Ce---eeeeC---CCCCCcCC
Q 012089 457 --GD---KKRTK---KNSRPCLE 471 (471)
Q Consensus 457 --~~---~~kTk---~t~nP~Wn 471 (471)
+. ++||+ +|+||+||
T Consensus 61 ~~~~~~~~~kT~v~~~t~nP~wn 83 (153)
T 1w15_A 61 HAKKRISKKKTHVKKCTPNAVFN 83 (153)
T ss_dssp ETTEEEEEEECCCCCSCSSEEEE
T ss_pred eCCeEeceEecCcccCCCCCeec
Confidence 33 33776 89999997
No 69
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=98.59 E-value=7.9e-08 Score=81.76 Aligned_cols=44 Identities=23% Similarity=0.323 Sum_probs=37.1
Q ss_pred ceEEEEEEeeeecCCC---CCCCCcEEEEEEc-----CeeeeeC---CCCCCcCC
Q 012089 428 AGLLSVLVQGAEDVEG---ENHNNPYAIILYK-----GDKKRTK---KNSRPCLE 471 (471)
Q Consensus 428 ~g~L~V~v~~Ak~L~~---~~~~dpyv~v~~~-----~~~~kTk---~t~nP~Wn 471 (471)
.|.|.|+|++|+||+. .+.+||||++++. ..+.||+ +|.||+||
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wn 69 (137)
T 3rdl_A 15 DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWN 69 (137)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEE
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcc
Confidence 4799999999999987 3589999999994 3445777 89999997
No 70
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.55 E-value=4.1e-08 Score=84.20 Aligned_cols=58 Identities=22% Similarity=0.366 Sum_probs=48.6
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEc
Q 012089 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYK 456 (471)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~---~~~~dpyv~v~~~ 456 (471)
....|+|++++.|. .|.|.|+|++|+||+. .+.+||||++++.
T Consensus 3 ~~~~G~i~~~l~y~----------------------------------~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~ 48 (142)
T 1rh8_A 3 HPITGEIQLQINYD----------------------------------LGNLIIHILQARNLVPRDNNGYSDPFVKVYLL 48 (142)
T ss_dssp CCCCCEEEEEEEEE----------------------------------TTEEEEEEEEEESCCCCSSSSCSCCEEEEEET
T ss_pred CCcceEEEEEEEEc----------------------------------CCEEEEEEEEecCCCCCCCCCCCCceEEEEEe
Confidence 34689999999994 3689999999999997 3679999999998
Q ss_pred Ce--------------eeeeC---CCCCCcCC
Q 012089 457 GD--------------KKRTK---KNSRPCLE 471 (471)
Q Consensus 457 ~~--------------~~kTk---~t~nP~Wn 471 (471)
+. +.||+ +|+||+||
T Consensus 49 ~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wn 80 (142)
T 1rh8_A 49 PGRGQVMVVQNASAEYKRRTKYVQKSLNPEWN 80 (142)
T ss_dssp TSSCCCEECCCCCHHHHTTTTTTHHHHSCEEE
T ss_pred cCCCcccccccccccceeeccccCCCCCCCCC
Confidence 64 23676 89999997
No 71
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.51 E-value=1.6e-07 Score=81.31 Aligned_cols=58 Identities=24% Similarity=0.393 Sum_probs=47.5
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEc
Q 012089 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYK 456 (471)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~---~~~~dpyv~v~~~ 456 (471)
....|+|++.+.|. .+.|.|+|++|+||+. .+.+||||++++.
T Consensus 16 ~~~~G~l~~~l~~~----------------------------------~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~ 61 (149)
T 1a25_A 16 MERRGRIYIQAHID----------------------------------REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLI 61 (149)
T ss_dssp -CTTCEEEEEEEES----------------------------------SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEE
T ss_pred CCcceEEEEEEEec----------------------------------CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEE
Confidence 34579999999872 3689999999999986 3579999999997
Q ss_pred C-----eeeeeC---CCCCCcCC
Q 012089 457 G-----DKKRTK---KNSRPCLE 471 (471)
Q Consensus 457 ~-----~~~kTk---~t~nP~Wn 471 (471)
+ .++||+ +|.||+||
T Consensus 62 ~~~~~~~~~kT~v~~~t~nP~wn 84 (149)
T 1a25_A 62 PDPKSESKQKTKTIKCSLNPEWN 84 (149)
T ss_dssp SCTTCSSCEECCCCSSCSSCEEE
T ss_pred CCCCCcceEecceeCCCCCCcCC
Confidence 4 344777 89999997
No 72
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=98.45 E-value=2.3e-07 Score=80.98 Aligned_cols=46 Identities=20% Similarity=0.280 Sum_probs=39.8
Q ss_pred CcceEEEEEEeeeecCCCC-------------CCCCcEEEEEEcCeee-eeC---CCCCCcCC
Q 012089 426 SGAGLLSVLVQGAEDVEGE-------------NHNNPYAIILYKGDKK-RTK---KNSRPCLE 471 (471)
Q Consensus 426 ~~~g~L~V~v~~Ak~L~~~-------------~~~dpyv~v~~~~~~~-kTk---~t~nP~Wn 471 (471)
...|.|+|+|.+|+||+.. +.+||||++.+++++. ||+ +|+||+||
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WN 88 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYN 88 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccC
Confidence 3689999999999999852 4699999999998764 776 89999998
No 73
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=98.45 E-value=3.2e-07 Score=77.65 Aligned_cols=45 Identities=27% Similarity=0.460 Sum_probs=41.1
Q ss_pred cceEEEEEEeeeecCCC---CCCCCcEEEEEEcCeeeeeC---CCCCCcCC
Q 012089 427 GAGLLSVLVQGAEDVEG---ENHNNPYAIILYKGDKKRTK---KNSRPCLE 471 (471)
Q Consensus 427 ~~g~L~V~v~~Ak~L~~---~~~~dpyv~v~~~~~~~kTk---~t~nP~Wn 471 (471)
..|.|.|+|++|+||+. .+.+||||++++++++.||+ +|.||+||
T Consensus 11 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wn 61 (133)
T 2ep6_A 11 DVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWN 61 (133)
T ss_dssp CSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCC
T ss_pred CceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccc
Confidence 68999999999999996 36899999999999888887 89999998
No 74
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=98.43 E-value=2.3e-07 Score=82.29 Aligned_cols=58 Identities=24% Similarity=0.356 Sum_probs=46.9
Q ss_pred CccceEEEEEEEEEeccCCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC----CCCCCcEEEEEE
Q 012089 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG----ENHNNPYAIILY 455 (471)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~Ak~L~~----~~~~dpyv~v~~ 455 (471)
....|+|++.+.| . .+.|.|+|++|+||+. .+.+||||++++
T Consensus 15 ~~~~G~l~~~l~y-~---------------------------------~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l 60 (171)
T 2q3x_A 15 TPAMGDIQIGMED-K---------------------------------KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYL 60 (171)
T ss_dssp --CCCEEEEEEEE-E---------------------------------TTEEEEEEEEEESCCCCC---CCCEEEEEEEE
T ss_pred CCCccEEEEEEEE-C---------------------------------CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEE
Confidence 3457999999999 2 4699999999999986 367999999998
Q ss_pred cCe-----eeeeC---CCCCCcCC
Q 012089 456 KGD-----KKRTK---KNSRPCLE 471 (471)
Q Consensus 456 ~~~-----~~kTk---~t~nP~Wn 471 (471)
.++ ++||+ +|+||+||
T Consensus 61 ~~~~~~~~~~kT~v~~~t~nP~wn 84 (171)
T 2q3x_A 61 LENGACIAKKKTRIARKTLDPLYQ 84 (171)
T ss_dssp EETTEEEEEEECCCCCSCSSCEEE
T ss_pred ECCCccccceeCccCCCCCCCCCC
Confidence 643 44776 88999997
No 75
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=98.38 E-value=3.5e-07 Score=78.94 Aligned_cols=46 Identities=28% Similarity=0.400 Sum_probs=41.0
Q ss_pred CcceEEEEEEeeeecCCC---CCCCCcEEEEEEcCeeeeeC---CCCCCcCC
Q 012089 426 SGAGLLSVLVQGAEDVEG---ENHNNPYAIILYKGDKKRTK---KNSRPCLE 471 (471)
Q Consensus 426 ~~~g~L~V~v~~Ak~L~~---~~~~dpyv~v~~~~~~~kTk---~t~nP~Wn 471 (471)
...|.|.|+|++|+||+. .+.+||||++++++++.||+ +|.||+||
T Consensus 14 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wn 65 (148)
T 3kwu_A 14 KWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWE 65 (148)
T ss_dssp -CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEE
T ss_pred ccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcc
Confidence 367999999999999987 36899999999999888887 89999997
No 76
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=98.37 E-value=2.8e-07 Score=77.10 Aligned_cols=44 Identities=23% Similarity=0.425 Sum_probs=38.4
Q ss_pred ceEEEEEEeeeecCCCC------CCCCcEEEEEEcC---eeeeeC---CCCCCcCC
Q 012089 428 AGLLSVLVQGAEDVEGE------NHNNPYAIILYKG---DKKRTK---KNSRPCLE 471 (471)
Q Consensus 428 ~g~L~V~v~~Ak~L~~~------~~~dpyv~v~~~~---~~~kTk---~t~nP~Wn 471 (471)
.|.|.|+|++|+||+.. +.+||||++++++ .++||+ +|.||+||
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wn 57 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWN 57 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEE
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCccc
Confidence 68999999999999972 7899999999986 445777 88999997
No 77
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.35 E-value=4e-07 Score=77.75 Aligned_cols=45 Identities=27% Similarity=0.590 Sum_probs=40.7
Q ss_pred cceEEEEEEeeeecCCCC--CCCCcEEEEEEcCeeeeeC---CCCCCcCC
Q 012089 427 GAGLLSVLVQGAEDVEGE--NHNNPYAIILYKGDKKRTK---KNSRPCLE 471 (471)
Q Consensus 427 ~~g~L~V~v~~Ak~L~~~--~~~dpyv~v~~~~~~~kTk---~t~nP~Wn 471 (471)
..|.|.|+|++|+||+.. +.+||||+++++++++||+ ++.||+||
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~~~kT~v~~~t~nP~wn 54 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWN 54 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSSSCCCEEEEEECSSCEEECCCCCSCSSCEEE
T ss_pred CCcEEEEEEEEeeCCCCCCCCCCCeEEEEEECCEeEEeeeecCCCCCccC
Confidence 578999999999999863 5899999999999888887 88999997
No 78
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=98.35 E-value=5.4e-07 Score=76.50 Aligned_cols=45 Identities=27% Similarity=0.419 Sum_probs=37.4
Q ss_pred cceEEEEEEeeeecCCC--CCCCCcEEEEEEc-----CeeeeeC---CCCCCcCC
Q 012089 427 GAGLLSVLVQGAEDVEG--ENHNNPYAIILYK-----GDKKRTK---KNSRPCLE 471 (471)
Q Consensus 427 ~~g~L~V~v~~Ak~L~~--~~~~dpyv~v~~~-----~~~~kTk---~t~nP~Wn 471 (471)
..+.|.|+|.+|+||+. .+.+||||++++. ..++||+ +|+||+||
T Consensus 18 ~~~~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wn 72 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFN 72 (134)
T ss_dssp ETTEEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEE
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCc
Confidence 35799999999999986 4689999999993 3344777 89999997
No 79
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=98.25 E-value=7.6e-07 Score=75.55 Aligned_cols=45 Identities=20% Similarity=0.419 Sum_probs=40.4
Q ss_pred cceEEEEEEeeeecCCCC---CCCCcEEEEEEcCeeeeeC----CCCCCcCC
Q 012089 427 GAGLLSVLVQGAEDVEGE---NHNNPYAIILYKGDKKRTK----KNSRPCLE 471 (471)
Q Consensus 427 ~~g~L~V~v~~Ak~L~~~---~~~dpyv~v~~~~~~~kTk----~t~nP~Wn 471 (471)
..|.|.|+|++|+||+.. +.+||||++++++++.||+ ++.||+||
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wn 59 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWN 59 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEE
T ss_pred CcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccC
Confidence 679999999999999973 5799999999999888887 58999997
No 80
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=98.23 E-value=7.3e-07 Score=75.79 Aligned_cols=45 Identities=20% Similarity=0.273 Sum_probs=38.0
Q ss_pred cceEEEEEEeeeecCCCC---C-----------CCCcEEEEEEcCeee-eeC---CCCCCcCC
Q 012089 427 GAGLLSVLVQGAEDVEGE---N-----------HNNPYAIILYKGDKK-RTK---KNSRPCLE 471 (471)
Q Consensus 427 ~~g~L~V~v~~Ak~L~~~---~-----------~~dpyv~v~~~~~~~-kTk---~t~nP~Wn 471 (471)
..|.|.|+|++|+||+.. + .+||||+++++++.. ||+ +|+||+||
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~Wn 66 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWH 66 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccC
Confidence 579999999999999863 1 399999999987764 665 89999997
No 81
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=98.22 E-value=1.4e-06 Score=73.55 Aligned_cols=45 Identities=18% Similarity=0.192 Sum_probs=38.2
Q ss_pred cceEEEEEEeeeecCCC---CCCCCcEEEEEEcC--eeeeeC---CCCCCcCC
Q 012089 427 GAGLLSVLVQGAEDVEG---ENHNNPYAIILYKG--DKKRTK---KNSRPCLE 471 (471)
Q Consensus 427 ~~g~L~V~v~~Ak~L~~---~~~~dpyv~v~~~~--~~~kTk---~t~nP~Wn 471 (471)
....|.|+|++|+||+. .+.+||||++++++ +..||+ +|+||+||
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wn 55 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWN 55 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEE
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCcc
Confidence 35789999999999986 36799999999975 455787 99999997
No 82
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=98.17 E-value=2.2e-06 Score=74.22 Aligned_cols=45 Identities=18% Similarity=0.271 Sum_probs=36.1
Q ss_pred cceEEEEEEeeeecCCCC---CCCCcEEEEEEcC------eeeeeC---CCCCCcCC
Q 012089 427 GAGLLSVLVQGAEDVEGE---NHNNPYAIILYKG------DKKRTK---KNSRPCLE 471 (471)
Q Consensus 427 ~~g~L~V~v~~Ak~L~~~---~~~dpyv~v~~~~------~~~kTk---~t~nP~Wn 471 (471)
..+.|.|+|++|+||+.. +.+||||++++.+ ...||+ +|.||+||
T Consensus 18 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wn 74 (153)
T 3b7y_A 18 NSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWN 74 (153)
T ss_dssp TCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCC
T ss_pred CccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCC
Confidence 679999999999999963 5899999999974 334777 89999998
No 83
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=98.16 E-value=1.9e-06 Score=76.47 Aligned_cols=45 Identities=22% Similarity=0.257 Sum_probs=39.5
Q ss_pred cceEEEEEEeeeecCCC---CCCCCcEEEEEEcCeeeeeC---CCCCCcCC
Q 012089 427 GAGLLSVLVQGAEDVEG---ENHNNPYAIILYKGDKKRTK---KNSRPCLE 471 (471)
Q Consensus 427 ~~g~L~V~v~~Ak~L~~---~~~~dpyv~v~~~~~~~kTk---~t~nP~Wn 471 (471)
..+.|.|+|++|+||+. .+.+||||+++++++++||+ +|+||+||
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wn 84 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWK 84 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEE
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeEC
Confidence 57899999999999993 23599999999999777887 89999997
No 84
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=98.09 E-value=1e-06 Score=74.50 Aligned_cols=44 Identities=27% Similarity=0.274 Sum_probs=35.1
Q ss_pred cceEEEEEEeeeecCCCCCCCCcEEEEEEcCeeeeeC---CCCCCcCC
Q 012089 427 GAGLLSVLVQGAEDVEGENHNNPYAIILYKGDKKRTK---KNSRPCLE 471 (471)
Q Consensus 427 ~~g~L~V~v~~Ak~L~~~~~~dpyv~v~~~~~~~kTk---~t~nP~Wn 471 (471)
+.+.|.|+|++|++|+..+.+||||++. +...+.|. ++.||+||
T Consensus 3 ~~~~L~V~V~~A~~l~~~g~~DPYv~v~-~~~~kt~~~~~~t~nP~Wn 49 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGAQEKFNTYVTLK-VQNVKSTTIAVRGSQPSWE 49 (131)
T ss_dssp CCEEEEEEEEEEECSSCGGGCEEEEEEE-ETTEEEECCCEESSSCEEE
T ss_pred cceEEEEEEEEeECCCCCCCcCeEEEEE-ecCEEEeEecCCCCCceEC
Confidence 4689999999999998777899999999 33323222 69999997
No 85
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=97.85 E-value=1.7e-05 Score=82.67 Aligned_cols=45 Identities=27% Similarity=0.380 Sum_probs=40.6
Q ss_pred cceEEEEEEeeeecCCC--CCCCCcEEEEEEcCeeeeeC---CCCCCcCC
Q 012089 427 GAGLLSVLVQGAEDVEG--ENHNNPYAIILYKGDKKRTK---KNSRPCLE 471 (471)
Q Consensus 427 ~~g~L~V~v~~Ak~L~~--~~~~dpyv~v~~~~~~~kTk---~t~nP~Wn 471 (471)
..|.|.|.|++|+||+. .+.+||||++++++++.||+ +|+||+||
T Consensus 392 ~~~~L~V~V~~A~~L~~D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wn 441 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWGDYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWT 441 (540)
T ss_dssp TEEEEEEEEEEEESCCCSSCSCCCEEEEEEETTEEEECCCBCSCSSCBCC
T ss_pred cccEEEEEEEEccCCCcccCCCcCeEEEEEECCEeeeeeeecCCCCCCCC
Confidence 46899999999999987 35799999999999888888 89999998
No 86
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=97.70 E-value=2e-05 Score=69.46 Aligned_cols=45 Identities=24% Similarity=0.226 Sum_probs=34.5
Q ss_pred cceEEEEEEeeeecCCCCCCCCcEEEEEEcCeeeeeC--CCCCCcCC
Q 012089 427 GAGLLSVLVQGAEDVEGENHNNPYAIILYKGDKKRTK--KNSRPCLE 471 (471)
Q Consensus 427 ~~g~L~V~v~~Ak~L~~~~~~dpyv~v~~~~~~~kTk--~t~nP~Wn 471 (471)
..+.|.|+|++|++|+..+.+||||++.....+.+|. ++.||+||
T Consensus 12 ~~~~L~V~V~~A~~l~~~g~~DPYV~v~~~~~kt~~~~~~t~nP~Wn 58 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDGAQEKFNTYVTLKVQNVESTTIAVRGSQPSWE 58 (167)
T ss_dssp CCCEEEEEEEEEECSSCGGGCEEEEEEEETTEEEECCCEESSSCEEE
T ss_pred ceEEEEEEEEEEECCCCCCCCCeEEEEEecceEEEEecCCCCCCCCC
Confidence 4689999999999997677899999999221111222 69999997
No 87
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=97.59 E-value=5.2e-05 Score=78.90 Aligned_cols=45 Identities=27% Similarity=0.389 Sum_probs=40.0
Q ss_pred cceEEEEEEeeeecCCC---CCCCCcEEEEEEcCeeeeeC---CCCCCcCC
Q 012089 427 GAGLLSVLVQGAEDVEG---ENHNNPYAIILYKGDKKRTK---KNSRPCLE 471 (471)
Q Consensus 427 ~~g~L~V~v~~Ak~L~~---~~~~dpyv~v~~~~~~~kTk---~t~nP~Wn 471 (471)
..|.|.|+|.+|+||+. .+.+||||++++++++.||+ +|+||+||
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~ 435 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWN 435 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEE
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccC
Confidence 57899999999999986 36899999999998888887 89999997
No 88
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=97.49 E-value=5.1e-05 Score=64.05 Aligned_cols=41 Identities=12% Similarity=0.237 Sum_probs=37.2
Q ss_pred eEEEEEEeeeecCCCCCCCCcEEEEEEcCeeeeeC----CCCCCcCC
Q 012089 429 GLLSVLVQGAEDVEGENHNNPYAIILYKGDKKRTK----KNSRPCLE 471 (471)
Q Consensus 429 g~L~V~v~~Ak~L~~~~~~dpyv~v~~~~~~~kTk----~t~nP~Wn 471 (471)
=.|+|.|.+|.||++ .+|||+++++.+.++||| .+.||+||
T Consensus 21 msL~V~l~~a~~Lpg--~~Dp~akv~FRg~k~kTkvi~~~~~npvfn 65 (144)
T 3l9b_A 21 MALIVHLKTVSELRG--RADRIAKVTFRGQSFYSRVLENCEDVADFD 65 (144)
T ss_dssp EEEEEEEEEEESCCS--CEEEEEEEEETTEEEECCCEEEECSCEEEE
T ss_pred EEEEEEEEEecCCCC--CCCCeEEEEEeccceeeEEeccCCCCceEc
Confidence 369999999999996 799999999999999999 38999997
No 89
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=97.25 E-value=0.00017 Score=77.72 Aligned_cols=45 Identities=22% Similarity=0.372 Sum_probs=39.0
Q ss_pred cceEEEEEEeeeecCCC------CCCCCcEEEEEEcC---eeeeeC---CCCCCcCC
Q 012089 427 GAGLLSVLVQGAEDVEG------ENHNNPYAIILYKG---DKKRTK---KNSRPCLE 471 (471)
Q Consensus 427 ~~g~L~V~v~~Ak~L~~------~~~~dpyv~v~~~~---~~~kTk---~t~nP~Wn 471 (471)
..+.|.|+|++|+||+. .+.+||||++++++ .++||+ +|+||+||
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWN 72 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWN 72 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEE
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeee
Confidence 57899999999999997 36899999999985 345777 89999997
No 90
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=97.17 E-value=0.00034 Score=74.37 Aligned_cols=45 Identities=18% Similarity=0.264 Sum_probs=37.7
Q ss_pred cceEEEEEEeeeecCCCC-----CCCCcEEEEEEcC-----eeeeeC---CC-CCCcCC
Q 012089 427 GAGLLSVLVQGAEDVEGE-----NHNNPYAIILYKG-----DKKRTK---KN-SRPCLE 471 (471)
Q Consensus 427 ~~g~L~V~v~~Ak~L~~~-----~~~dpyv~v~~~~-----~~~kTk---~t-~nP~Wn 471 (471)
..+.|.|+|++|+||+.. +.+||||++.+.+ .++||+ +| .||+||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~Wn 553 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWD 553 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccC
Confidence 678999999999999862 5799999999955 345887 65 899997
No 91
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=97.04 E-value=0.00095 Score=71.86 Aligned_cols=44 Identities=23% Similarity=0.366 Sum_probs=36.5
Q ss_pred ceEEEEEEeeeecCCC---CCCCCcEEEEEEc-----CeeeeeC---CCCCCcCC
Q 012089 428 AGLLSVLVQGAEDVEG---ENHNNPYAIILYK-----GDKKRTK---KNSRPCLE 471 (471)
Q Consensus 428 ~g~L~V~v~~Ak~L~~---~~~~dpyv~v~~~-----~~~~kTk---~t~nP~Wn 471 (471)
.+.|.|.|.+|+||+. .+.+||||++++. ..++||+ +|+||+||
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wn 225 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWN 225 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEE
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCcc
Confidence 4689999999999986 4689999999983 3344776 89999997
No 92
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=96.85 E-value=0.0012 Score=71.96 Aligned_cols=44 Identities=20% Similarity=0.308 Sum_probs=36.6
Q ss_pred cceEEEEEEeeeecCCCCCCCCcEEEEEEcC-------eeeeeC----CCCCCcCC
Q 012089 427 GAGLLSVLVQGAEDVEGENHNNPYAIILYKG-------DKKRTK----KNSRPCLE 471 (471)
Q Consensus 427 ~~g~L~V~v~~Ak~L~~~~~~dpyv~v~~~~-------~~~kTk----~t~nP~Wn 471 (471)
..+.|.|+|++|++|+.+ .+||||+|.+.+ +++||+ ++.||+||
T Consensus 648 ~~~~L~V~Visaq~L~~~-~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWN 702 (816)
T 3qr0_A 648 VAGTIEIKIISAQFLSDK-QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYD 702 (816)
T ss_dssp CCEEEEEEEEEEECCCSS-CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCC
T ss_pred cceEEEEEEEEcccCCCC-CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEc
Confidence 458999999999999974 799999999875 344777 35899998
No 93
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=96.56 E-value=0.0022 Score=69.92 Aligned_cols=44 Identities=23% Similarity=0.241 Sum_probs=35.6
Q ss_pred cceEEEEEEeeeecCCCCCCCCcEEEEEEcC------eeeeeC-----CCCCCcCC
Q 012089 427 GAGLLSVLVQGAEDVEGENHNNPYAIILYKG------DKKRTK-----KNSRPCLE 471 (471)
Q Consensus 427 ~~g~L~V~v~~Ak~L~~~~~~dpyv~v~~~~------~~~kTk-----~t~nP~Wn 471 (471)
..+.|.|.|++|++|+. +.+||||+|.+.+ ++.||| ++.||+||
T Consensus 676 ~~~~L~V~Visa~~L~~-~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWn 730 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE-RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWK 730 (799)
T ss_dssp TCEEEEEEEEEEESCCS-SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCC
T ss_pred eeeeEEEEEEeccccCc-cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeee
Confidence 57899999999999996 4799999999954 123554 45899998
No 94
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=96.52 E-value=0.0021 Score=70.44 Aligned_cols=43 Identities=23% Similarity=0.234 Sum_probs=35.4
Q ss_pred ceEEEEEEeeeecCCCCCCCCcEEEEEEcC------eeeeeC---C-CCCCcCC
Q 012089 428 AGLLSVLVQGAEDVEGENHNNPYAIILYKG------DKKRTK---K-NSRPCLE 471 (471)
Q Consensus 428 ~g~L~V~v~~Ak~L~~~~~~dpyv~v~~~~------~~~kTk---~-t~nP~Wn 471 (471)
...|.|.|++|++|+.+ .+||||+|.+.+ .++||| + +.||+||
T Consensus 724 ~~~L~V~Visaq~L~~~-~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWn 776 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR-KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWD 776 (885)
T ss_dssp CEEEEEEEEEEESCCSS-CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCC
T ss_pred ceEEEEEEEEeccCccc-CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeec
Confidence 45899999999999974 799999999965 134777 3 5999998
No 95
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=93.61 E-value=1.1 Score=40.44 Aligned_cols=57 Identities=14% Similarity=0.198 Sum_probs=41.9
Q ss_pred cceeeeeecCCCCCeEeeEEEEEeecC--CCCeEEEEEEEcCCCC----CCCeeEEEEEECcc
Q 012089 299 PWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVFDWDKVG----GHDRLGMQLVPLKL 355 (471)
Q Consensus 299 ~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~~L~v~v~d~d~~~----~d~~lG~~~i~L~~ 355 (471)
..++|.+...+.+|.|+|++.+.+... ...-|.|+++....-. .+..+|.+.+||-.
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 346788888899999999999998743 3567999998765321 22467888888743
No 96
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=91.23 E-value=3.2 Score=35.26 Aligned_cols=128 Identities=11% Similarity=0.100 Sum_probs=83.3
Q ss_pred ccCCceEEEEEEEEccccccCc-cCCCCCcEEEEEEcCccccceeeeeecCCCCCeEeeEEEEEeecC-------CCCeE
Q 012089 259 IKKPVGILHVKVVRASKLLKKD-FLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP-------ESQIL 330 (471)
Q Consensus 259 ~~~~~G~L~V~v~~a~~L~~~d-~~g~~DPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-------~~~~L 330 (471)
...-.+.+.|+|.++.==+..- ..+..+|+.-+.++=-..+.+.|.+.. ..+|.+|.+-.|.+... .+..+
T Consensus 13 l~~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l 91 (156)
T 2yrb_A 13 LERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTI 91 (156)
T ss_dssp CCSSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCE
T ss_pred ccCCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCE
Confidence 3445688999999876322111 123457866666654344444666654 88999999888888522 14579
Q ss_pred EEEEEEcCCCCCCCeeEEEEEECcccCCCCc-eEEEEecccccCCCCCCCC--ccceEEEEEEEEEec
Q 012089 331 QLQVFDWDKVGGHDRLGMQLVPLKLLTPHET-KEFTLDLLKHTNISDPKDM--KQRGKIVVELTYVPF 395 (471)
Q Consensus 331 ~v~v~d~d~~~~d~~lG~~~i~L~~l~~~~~-~~~~~~l~~~~~~~~~~~~--~~~G~l~l~l~y~p~ 395 (471)
.++++... .+.-+.+|.+.|+|.++..... .....+|... ++ ..-|+|.+.++...+
T Consensus 92 ~lELhqa~-g~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~-------~g~~~~~G~LeywiRL~~P 151 (156)
T 2yrb_A 92 TLEVHQAY-STEYETIAACQLKFHEILEKSGRIFCTASLIGT-------KGDIPNFGTVEYWFRLRVS 151 (156)
T ss_dssp EEEEEEEC-SSCEEEEEEEEECCSHHHHCCSCEEEEEEECBS-------SSCCTTSEEEEEEEEEEEC
T ss_pred EEEEEEee-CCCceEEEEEEEEhHHhhCcCCceEEEEEEEcC-------CCCcceEEEEEEEEEEecc
Confidence 99998874 2345689999999999875443 3334444331 23 478999999998753
No 97
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=90.48 E-value=0.57 Score=38.24 Aligned_cols=45 Identities=20% Similarity=0.256 Sum_probs=32.1
Q ss_pred cceEEEEEEeeeec--CCC-CCCCCcEEEEEEcCee-----e--eeC-CCCCCcCC
Q 012089 427 GAGLLSVLVQGAED--VEG-ENHNNPYAIILYKGDK-----K--RTK-KNSRPCLE 471 (471)
Q Consensus 427 ~~g~L~V~v~~Ak~--L~~-~~~~dpyv~v~~~~~~-----~--kTk-~t~nP~Wn 471 (471)
.+.-|+|.+.++.- |+. ....||||.+.+.... + .|| +|..|+||
T Consensus 4 m~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wn 59 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWK 59 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTT
T ss_pred cCccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCcc
Confidence 45688888877663 333 2469999999886443 2 345 99999998
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=90.23 E-value=0.35 Score=40.05 Aligned_cols=45 Identities=18% Similarity=0.151 Sum_probs=33.2
Q ss_pred cceEEEEEEeeeecCCC----CCCCCcEEEEEEcCeee-------eeC-CCCCCcCC
Q 012089 427 GAGLLSVLVQGAEDVEG----ENHNNPYAIILYKGDKK-------RTK-KNSRPCLE 471 (471)
Q Consensus 427 ~~g~L~V~v~~Ak~L~~----~~~~dpyv~v~~~~~~~-------kTk-~t~nP~Wn 471 (471)
..+-|+|.+.++.--+. ....||||.+.+..... .|| +|..|+||
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wn 64 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWD 64 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSS
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCcccc
Confidence 56789999987775332 34799999998865422 445 99999998
No 99
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=90.00 E-value=1.4 Score=48.57 Aligned_cols=92 Identities=11% Similarity=0.105 Sum_probs=61.4
Q ss_pred ceEEEEEEEEccccccCccCCCCCcEEEEEE--cCcccc-ceeeeeecCCCCCeEeeEEEEEee---cCCCCeEEEEEEE
Q 012089 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSL--TGEKLP-WKKTTVKKKNLNPEWNENFKLVVK---EPESQILQLQVFD 336 (471)
Q Consensus 263 ~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l--~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~---~~~~~~L~v~v~d 336 (471)
...++|+|.++.++... ..++-||.+.+ |++... ...|+.+.-..+|.|||...|.+. -|....|.+++|+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 46789999999998754 34677887665 444332 234544455678999999999876 2347789999999
Q ss_pred cCCC--C----------CCCeeEEEEEECcccC
Q 012089 337 WDKV--G----------GHDRLGMQLVPLKLLT 357 (471)
Q Consensus 337 ~d~~--~----------~d~~lG~~~i~L~~l~ 357 (471)
.... + .+..+|.+.++|-+-.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EC----------------CEEEEEEEEESBCTT
T ss_pred ecCCccCccccccccccccceEEEEeeeEECCc
Confidence 7431 1 2347899888886543
No 100
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=89.37 E-value=1.8 Score=48.16 Aligned_cols=93 Identities=23% Similarity=0.199 Sum_probs=61.8
Q ss_pred ceEEEEEEEEccccccCccCCCCCcEEEEEE--cCccccc-eeeeeecCCCCCeEeeEEEEEee---cCCCCeEEEEEEE
Q 012089 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSL--TGEKLPW-KKTTVKKKNLNPEWNENFKLVVK---EPESQILQLQVFD 336 (471)
Q Consensus 263 ~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l--~~~~~~~-~kT~v~~~t~nP~wne~f~f~v~---~~~~~~L~v~v~d 336 (471)
...++|+|.++.++.... ....+-||.+.+ |++.... .+|+. ....+|.|||...|.+. -|....|.++||+
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~-~~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQR-VPCSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCC-CCTTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccc-cCCCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 457899999998886432 234677888777 4333322 23433 33457889999999876 2447789999998
Q ss_pred cCCC----CCCCeeEEEEEECcccC
Q 012089 337 WDKV----GGHDRLGMQLVPLKLLT 357 (471)
Q Consensus 337 ~d~~----~~d~~lG~~~i~L~~l~ 357 (471)
.... ..+..||.+.++|-+..
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCTT
T ss_pred ecCccCcccccceeEEeeeeeEccC
Confidence 7642 12357999999997654
No 101
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=84.34 E-value=3.7 Score=45.38 Aligned_cols=93 Identities=17% Similarity=0.129 Sum_probs=57.4
Q ss_pred eEEEEEEEEccccccCccCCCCCcEEEEEE--cCccccceeeeeecCCCCCeEeeEEEEEee---cCCCCeEEEEEEEcC
Q 012089 264 GILHVKVVRASKLLKKDFLGTSDPYVKLSL--TGEKLPWKKTTVKKKNLNPEWNENFKLVVK---EPESQILQLQVFDWD 338 (471)
Q Consensus 264 G~L~V~v~~a~~L~~~d~~g~~DPyv~v~l--~~~~~~~~kT~v~~~t~nP~wne~f~f~v~---~~~~~~L~v~v~d~d 338 (471)
..++|+|..+....-. .+..++-||.+.+ |+......+|+.+.-+.+|.|||...|.+. -|....|.+++|+..
T Consensus 218 ~~f~i~i~~~~~~~~~-~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLP-RTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCC-TTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeeccccccc-CCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 4678888877541111 1234567877654 444433334555445667999999999875 234778999999864
Q ss_pred CCC----------------CCCeeEEEEEECcccC
Q 012089 339 KVG----------------GHDRLGMQLVPLKLLT 357 (471)
Q Consensus 339 ~~~----------------~d~~lG~~~i~L~~l~ 357 (471)
..+ +...+|.+.++|-+..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp C--------------------CEEEEEEEESBCTT
T ss_pred cCccccccccccccccccccceeEEEEeeeeecCC
Confidence 321 2346888888886544
No 102
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=76.31 E-value=3.3 Score=46.37 Aligned_cols=73 Identities=18% Similarity=0.208 Sum_probs=50.6
Q ss_pred ceEEEEEEEEccccccCccCCCCCcEEEEE--EcCcccc-ceeeeeecCCCCCeEeeEEEEEee--c-CCCCeEEEEEEE
Q 012089 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLS--LTGEKLP-WKKTTVKKKNLNPEWNENFKLVVK--E-PESQILQLQVFD 336 (471)
Q Consensus 263 ~G~L~V~v~~a~~L~~~d~~g~~DPyv~v~--l~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~--~-~~~~~L~v~v~d 336 (471)
...++|+|.++.++... ..++-||.+. -|+.... ..+|+.+.-+.+|.|||...|.+. + |....|.+++|+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 46789999999998754 3467777644 4554432 224555455678999999999876 2 346789999999
Q ss_pred cC
Q 012089 337 WD 338 (471)
Q Consensus 337 ~d 338 (471)
..
T Consensus 429 ~~ 430 (1092)
T 2y3a_A 429 VL 430 (1092)
T ss_dssp C-
T ss_pred ec
Confidence 63
No 103
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=49.77 E-value=3.6 Score=26.87 Aligned_cols=15 Identities=20% Similarity=0.479 Sum_probs=8.2
Q ss_pred HHHhheeeeeccCCc
Q 012089 23 LVGFFLFIYSKPNDD 37 (471)
Q Consensus 23 ~~~~~~~~~~~~~~r 37 (471)
+++...|.|+|++++
T Consensus 25 ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 25 IVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhhhhhh
Confidence 444455666666443
No 104
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=48.88 E-value=2.4 Score=27.65 Aligned_cols=24 Identities=21% Similarity=0.326 Sum_probs=12.7
Q ss_pred ccccchhHHHHHHhheeeeeccCC
Q 012089 13 FGFIGLPLGLLVGFFLFIYSKPND 36 (471)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~ 36 (471)
.+.+|+++.+++++....|+||++
T Consensus 16 ~~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 16 SAVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhheehhh
Confidence 344554444455655566666544
No 105
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=46.38 E-value=4.5 Score=26.40 Aligned_cols=14 Identities=7% Similarity=0.218 Sum_probs=7.4
Q ss_pred HHHhheeeeeccCC
Q 012089 23 LVGFFLFIYSKPND 36 (471)
Q Consensus 23 ~~~~~~~~~~~~~~ 36 (471)
++++..|.|+|+++
T Consensus 26 ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 26 VVALGIGLFMRRRH 39 (44)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhhH
Confidence 34445555666544
No 106
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=28.85 E-value=6.6 Score=24.21 Aligned_cols=24 Identities=21% Similarity=0.101 Sum_probs=14.2
Q ss_pred cccccchhHHHHHHhheeeeeccC
Q 012089 12 GFGFIGLPLGLLVGFFLFIYSKPN 35 (471)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~ 35 (471)
+-|++|+++.++++.....|+||+
T Consensus 11 aagVvglll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 11 IATVVGVLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHHHHHHHTTTTTHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhheEEeec
Confidence 344455555556676677777653
No 107
>1ewf_A BPI, bactericidal/permeability-increasing protein; lipid-binding, lipopolysaccharide-binding, antibiotic; HET: PC1; 1.70A {Homo sapiens} SCOP: d.83.1.1 d.83.1.1 PDB: 1bp1_A*
Probab=25.19 E-value=4.9e+02 Score=25.43 Aligned_cols=20 Identities=10% Similarity=0.192 Sum_probs=15.7
Q ss_pred EEEEEEEEEEEEEEEEEEEe
Q 012089 167 RITVQLVDLQIFAAPRITLK 186 (471)
Q Consensus 167 ~~~v~v~~l~~~g~~rv~l~ 186 (471)
.+.+.++++.+.+.+|+...
T Consensus 103 ~~~~~v~~v~i~~~~~l~~~ 122 (456)
T 1ewf_A 103 NFDLSIEGMSISADLKLGSN 122 (456)
T ss_dssp EEEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEeeEEEEEEEEEeec
Confidence 56677778888888888776
Done!