Your job contains 1 sequence.
>012092
MPAQKRSYENATTNNNNNNHIIITPSEVVEAVLDDDGDDTLQRDHSNNLEEQQPPQDSTP
AAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFC
RECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEA
ARNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSD
ENDDANGDAGKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRE
SMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQ
LDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELHSK
INLPSSSNSLMIDPCKDKLQVLNEQETLTGLQTQNLGHGFLLLAYQKILLN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012092
(471 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2158705 - symbol:RING1A "RING 1A" species:3702... 715 1.1e-72 2
UNIPROTKB|E1BQF7 - symbol:RNF2 "Uncharacterized protein" ... 249 2.3e-26 3
UNIPROTKB|Q99496 - symbol:RNF2 "E3 ubiquitin-protein liga... 248 2.3e-26 3
UNIPROTKB|Q5R9J5 - symbol:RNF2 "E3 ubiquitin-protein liga... 248 2.3e-26 3
UNIPROTKB|A6QLQ0 - symbol:RNF2 "RNF2 protein" species:991... 248 3.0e-26 3
MGI|MGI:1101759 - symbol:Rnf2 "ring finger protein 2" spe... 248 3.0e-26 3
UNIPROTKB|E2RFW1 - symbol:RNF2 "Uncharacterized protein" ... 248 3.8e-26 3
UNIPROTKB|F1S3N6 - symbol:RNF2 "Uncharacterized protein" ... 248 3.8e-26 3
RGD|1305491 - symbol:Rnf2 "ring finger protein 2" species... 248 3.8e-26 3
ZFIN|ZDB-GENE-030131-5243 - symbol:rnf2 "ring finger prot... 245 2.1e-23 2
TAIR|locus:2825930 - symbol:AT1G28327 "AT1G28327" species... 247 1.3e-20 1
UNIPROTKB|Q7ZWM8 - symbol:rnf2-b "E3 ubiquitin-protein li... 244 4.2e-20 2
UNIPROTKB|Q66J69 - symbol:rnf2-a "E3 ubiquitin-protein li... 244 4.9e-20 2
UNIPROTKB|F1MUV0 - symbol:RING1 "Uncharacterized protein"... 246 8.1e-19 1
UNIPROTKB|A1YER5 - symbol:RING1 "E3 ubiquitin-protein lig... 245 9.6e-19 1
UNIPROTKB|A1YFY1 - symbol:RING1 "E3 ubiquitin-protein lig... 245 9.6e-19 1
UNIPROTKB|A2T6X5 - symbol:RING1 "E3 ubiquitin-protein lig... 245 9.6e-19 1
UNIPROTKB|Q8WMN5 - symbol:RING1 "E3 ubiquitin-protein lig... 245 9.6e-19 1
UNIPROTKB|Q5TJF3 - symbol:RING1 "E3 ubiquitin-protein lig... 246 1.2e-18 1
UNIPROTKB|A5D9P0 - symbol:RING1 "Ring finger protein 1" s... 246 1.2e-18 1
UNIPROTKB|Q06587 - symbol:RING1 "E3 ubiquitin-protein lig... 245 1.6e-18 1
RGD|3576 - symbol:Ring1 "ring finger protein 1" species:1... 245 1.6e-18 1
MGI|MGI:1101770 - symbol:Ring1 "ring finger protein 1" sp... 244 2.1e-18 1
FB|FBgn0003330 - symbol:Sce "Sex combs extra" species:722... 239 1.1e-17 1
UNIPROTKB|Q3KNV8 - symbol:PCGF3 "Polycomb group RING fing... 134 8.1e-10 2
UNIPROTKB|I3LAF0 - symbol:PCGF3 "Uncharacterized protein"... 134 8.9e-10 2
UNIPROTKB|Q2KJ29 - symbol:PCGF3 "Polycomb group RING fing... 134 1.7e-09 2
UNIPROTKB|F1NLA3 - symbol:PCGF3 "Uncharacterized protein"... 133 3.0e-09 2
MGI|MGI:1916837 - symbol:Pcgf3 "polycomb group ring finge... 134 3.3e-09 2
UNIPROTKB|E1BAF7 - symbol:E1BAF7 "Uncharacterized protein... 134 4.3e-09 2
UNIPROTKB|F1PGG1 - symbol:PCGF3 "Uncharacterized protein"... 134 4.8e-09 2
UNIPROTKB|Q07G17 - symbol:pcgf3 "Polycomb group RING fing... 133 1.5e-08 2
UNIPROTKB|J9P325 - symbol:PCGF3 "Uncharacterized protein"... 134 2.9e-08 2
UNIPROTKB|C9J3G7 - symbol:PCGF3 "Polycomb group RING fing... 134 3.4e-08 1
UNIPROTKB|C9JYD0 - symbol:PCGF3 "Polycomb group RING fing... 134 3.4e-08 1
UNIPROTKB|F1LUN6 - symbol:F1LUN6 "Uncharacterized protein... 134 3.4e-08 1
UNIPROTKB|I3LDV4 - symbol:I3LDV4 "Uncharacterized protein... 124 6.7e-08 2
RGD|1549782 - symbol:Pcgf1 "polycomb group ring finger 1"... 120 1.9e-07 2
UNIPROTKB|Q6DLV9 - symbol:Pcgf1 "Polycomb group RING fing... 120 1.9e-07 2
UNIPROTKB|F1SNT4 - symbol:F1SNT4 "Uncharacterized protein... 121 2.0e-07 2
UNIPROTKB|Q9BSM1 - symbol:PCGF1 "Polycomb group RING fing... 120 2.1e-07 2
UNIPROTKB|F1MM90 - symbol:PCGF1 "Polycomb group RING fing... 120 2.7e-07 2
UNIPROTKB|Q2YDF9 - symbol:PCGF1 "Polycomb group RING fing... 120 2.7e-07 2
UNIPROTKB|E2R984 - symbol:PCGF1 "Uncharacterized protein"... 120 2.7e-07 2
MGI|MGI:1917087 - symbol:Pcgf1 "polycomb group ring finge... 120 2.7e-07 2
UNIPROTKB|I3LDC6 - symbol:LOC100524364 "Uncharacterized p... 105 3.6e-07 2
UNIPROTKB|B3KRH1 - symbol:RNF2 "Ring finger protein 2, is... 130 8.2e-07 2
UNIPROTKB|Q4QR06 - symbol:pcgf1 "Polycomb group RING fing... 118 1.9e-06 2
UNIPROTKB|Q5T8Z4 - symbol:BMI1 "Polycomb complex protein ... 114 4.9e-06 1
UNIPROTKB|Q5T8Z6 - symbol:BMI1 "Polycomb complex protein ... 114 4.9e-06 1
ZFIN|ZDB-GENE-030616-605 - symbol:pcgf1 "polycomb group r... 119 5.4e-06 2
UNIPROTKB|Q28H21 - symbol:pcgf1 "Polycomb group RING fing... 118 6.3e-06 2
UNIPROTKB|Q9BYE7 - symbol:PCGF6 "Polycomb group RING fing... 133 7.3e-06 1
UNIPROTKB|Q5T8Z5 - symbol:BMI1 "Polycomb complex protein ... 112 8.1e-06 1
UNIPROTKB|J3KT13 - symbol:PCGF2 "Polycomb group ring fing... 123 1.0e-05 2
UNIPROTKB|D4A0Y0 - symbol:D4A0Y0 "Uncharacterized protein... 111 1.0e-05 1
TAIR|locus:2133109 - symbol:BRCA1 "breast cancer suscepti... 115 2.1e-05 2
UNIPROTKB|E2RE60 - symbol:PCGF6 "Uncharacterized protein"... 128 2.6e-05 1
UNIPROTKB|D6RAS2 - symbol:TRIM60 "Tripartite motif-contai... 107 2.8e-05 1
UNIPROTKB|J9P0C4 - symbol:PCGF6 "Uncharacterized protein"... 128 3.1e-05 1
UNIPROTKB|E1BJL2 - symbol:PCGF6 "Uncharacterized protein"... 127 3.4e-05 1
UNIPROTKB|F1N8I5 - symbol:BRCA1 "Uncharacterized protein"... 130 4.2e-05 2
RGD|1562871 - symbol:RGD1562871 "similar to BMI1-like pro... 122 4.4e-05 1
GENEDB_PFALCIPARUM|PF11_0244 - symbol:PF11_0244 "hypothet... 121 4.9e-05 3
UNIPROTKB|Q8IID0 - symbol:PF11_0244 "Conserved Plasmodium... 121 4.9e-05 3
MGI|MGI:2685640 - symbol:Trim75 "tripartite motif-contain... 126 7.3e-05 1
ZFIN|ZDB-GENE-080219-13 - symbol:trim35-39 "tripartite mo... 125 8.8e-05 1
UNIPROTKB|E1BMR4 - symbol:PCGF2 "Uncharacterized protein"... 123 9.3e-05 1
UNIPROTKB|J9NUE7 - symbol:PCGF2 "Uncharacterized protein"... 123 9.3e-05 1
UNIPROTKB|E2QY05 - symbol:PCGF2 "Uncharacterized protein"... 123 9.5e-05 1
MGI|MGI:1918291 - symbol:Pcgf6 "polycomb group ring finge... 123 9.7e-05 1
UNIPROTKB|C9JWN8 - symbol:TRIM5 "Tripartite motif-contain... 102 9.8e-05 1
FB|FBgn0002283 - symbol:l(3)73Ah "lethal (3) 73Ah" specie... 110 9.8e-05 2
ZFIN|ZDB-GENE-080723-33 - symbol:pcgf5a "polycomb group r... 119 0.00010 1
UNIPROTKB|F1NDM6 - symbol:PCGF6 "Uncharacterized protein"... 121 0.00011 1
UNIPROTKB|C9IZ30 - symbol:RNF182 "E3 ubiquitin-protein li... 83 0.00012 2
UNIPROTKB|J9P2L6 - symbol:PCGF5 "Uncharacterized protein"... 118 0.00013 1
TAIR|locus:2033103 - symbol:DRIP1 "DREB2A-interacting pro... 123 0.00013 1
TAIR|locus:2055435 - symbol:AT2G34000 species:3702 "Arabi... 107 0.00014 1
UNIPROTKB|I3LU11 - symbol:PHRF1 "Uncharacterized protein"... 113 0.00015 2
MGI|MGI:99161 - symbol:Pcgf2 "polycomb group ring finger ... 123 0.00015 2
RGD|1305097 - symbol:Pcgf2 "polycomb group ring finger 2"... 123 0.00015 2
UNIPROTKB|P35227 - symbol:PCGF2 "Polycomb group RING fing... 123 0.00015 2
UNIPROTKB|F1N541 - symbol:TRIM34 "Uncharacterized protein... 105 0.00016 2
RGD|1306904 - symbol:Pcgf6 "polycomb group ring finger 6"... 121 0.00016 1
UNIPROTKB|J3KSI2 - symbol:RNF138 "E3 ubiquitin-protein li... 100 0.00016 1
UNIPROTKB|F1PTU1 - symbol:PCGF5 "Uncharacterized protein"... 118 0.00017 1
UNIPROTKB|E1BYN8 - symbol:PCGF5 "Uncharacterized protein"... 118 0.00017 1
UNIPROTKB|F1PTT1 - symbol:PCGF5 "Uncharacterized protein"... 118 0.00017 1
ZFIN|ZDB-GENE-060421-8366 - symbol:trim35-24 "tripartite ... 122 0.00020 1
RGD|1307403 - symbol:Bmi1 "Bmi1 polycomb ring finger onco... 114 0.00022 1
RGD|1583513 - symbol:Pcgf5 "polycomb group ring finger 5"... 116 0.00023 1
UNIPROTKB|Q5T8Z1 - symbol:BMI1 "Polycomb complex protein ... 114 0.00026 1
UNIPROTKB|A0JN86 - symbol:PCGF5 "Polycomb group RING fing... 116 0.00029 1
UNIPROTKB|Q86SE9 - symbol:PCGF5 "Polycomb group RING fing... 116 0.00029 1
MGI|MGI:1923505 - symbol:Pcgf5 "polycomb group ring finge... 116 0.00029 1
MGI|MGI:2141847 - symbol:Phrf1 "PHD and ring finger domai... 105 0.00034 2
ZFIN|ZDB-GENE-110920-8 - symbol:trim35-20 "tripartite mot... 119 0.00041 1
UNIPROTKB|E7EQW4 - symbol:BRCA1 "Breast cancer type 1 sus... 113 0.00043 1
UNIPROTKB|Q1L721 - symbol:rnf138 "E3 ubiquitin-protein li... 113 0.00043 1
WARNING: Descriptions of 40 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2158705 [details] [associations]
symbol:RING1A "RING 1A" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010076 "maintenance of floral meristem identity"
evidence=IMP] [GO:0010077 "maintenance of inflorescence meristem
identity" evidence=IMP] [GO:0010492 "maintenance of shoot apical
meristem identity" evidence=IMP] [GO:0035102 "PRC1 complex"
evidence=IPI] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IGI] EMBL:CP002688
GO:GO:0016874 GO:GO:0035102 GO:GO:0045814 KO:K10695 IPI:IPI00938631
RefSeq:NP_001154760.1 UniGene:At.30083 ProteinModelPortal:F4K8U4
SMR:F4K8U4 PRIDE:F4K8U4 EnsemblPlants:AT5G44280.2 GeneID:834451
KEGG:ath:AT5G44280 OMA:NASEAHE Uniprot:F4K8U4
Length = 525
Score = 715 (256.8 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 174/438 (39%), Positives = 257/438 (58%)
Query: 50 EEQQPPQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKT 109
+E+ ++ + + + +RS SS G++ EF+ + L +IRK+VQCPICL ++
Sbjct: 87 DEEAEEEEEEEEEEEEEEEDSKERSPSSISGDQSEFMEIDLGEIRKDVQCPICLVGMKFL 146
Query: 110 RTVMECLHRFCRECIDKAMRL----GNNECPACRTHCASRRSLRDDLNYDALIAALYPDI 165
R + ++ ++C + + NNECPACR HCASRRSLRDD +DALIAAL+ +I
Sbjct: 147 RLFIS-YYKENKDCDGMSPQFCATFKNNECPACRKHCASRRSLRDDPKFDALIAALFTNI 205
Query: 166 DKYXXXXXXXXXXXXXRNKQIQASIAQTFQRQTEALGRKRT-PKSTSALRRS----HGRY 220
D Y RNKQIQASIAQ QRQ+EAL ++R+ K + L RS G
Sbjct: 206 DSYEEEELAFHEDEMARNKQIQASIAQISQRQSEALVKRRSLGKEAAVLMRSPRIASGSR 265
Query: 221 RDTPLRGRRNYRMTELQGSDENDDANGDAGKDS-SSADERSTEVRPKRRKRWYGARFXXX 279
R R +E D+NDD N + G+D SS+DER TEVR K+R++ +R
Sbjct: 266 RRRNSRNMEQQNASEAHEDDDNDD-NNNRGRDKDSSSDERGTEVRQKKRRKRSTSRSTQH 324
Query: 280 XXXXXXXXXXXD--ENDSEVHRESMGASVGLIGPSERLAWGKGGIRSHTRHGS-VSGSNG 336
+ +ND+EV+R++ G S GL+ E LAWG+GG RS+TRHG+ SG +
Sbjct: 325 PSSSGANKNNGNCADNDTEVYRDTKGISPGLVWNPEILAWGRGGTRSNTRHGNNTSGGSS 384
Query: 337 KNARNNRLSKLVDYLQS-LEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLC 395
K+ RN R++KLV+YL+S ++ +LD+H+ LVSLD + IP L QPYLCCRPTL V+ L
Sbjct: 385 KSVRNARVNKLVEYLRSSVDGSSVELDIHVKLVSLDTKCIPDLPQPYLCCRPTLLVKQLR 444
Query: 396 QYVAHQTALQASEIEIYLVKEL---HSKI-NLPSSSNSLMIDPCKDKLQVLNEQETLTGL 451
++VA Q L+ E+E+ + + + I NLP+ + + KD++ L + ETL+ L
Sbjct: 445 EFVALQIHLKTEEVELLVTRRRVGEDAAIENLPAVTPASAA-ASKDEMLSLEDNETLSRL 503
Query: 452 QTQNLG-HG-FLLLAYQK 467
+ + H L++AY+K
Sbjct: 504 KIDFISSHEQHLIIAYRK 521
Score = 38 (18.4 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 8/29 (27%), Positives = 11/29 (37%)
Query: 53 QPPQDSTPAAAADVDGNESDRSRSSGDGE 81
QP P A D+ + + GD E
Sbjct: 19 QPRDRFNPEATQDLQEKDETKEEKEGDEE 47
>UNIPROTKB|E1BQF7 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0035102
"PRC1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0071339 "MLL1 complex"
evidence=IEA] [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP CTD:6045
EMBL:AADN02034211 IPI:IPI00572800 RefSeq:XP_422295.2
ProteinModelPortal:E1BQF7 Ensembl:ENSGALT00000007706 GeneID:424452
KEGG:gga:424452 NextBio:20826782 Uniprot:E1BQF7
Length = 336
Score = 249 (92.7 bits), Expect = 2.3e-26, Sum P(3) = 2.3e-26
Identities = 44/100 (44%), Positives = 58/100 (58%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYXXXXXXXXXXXXXRNKQ 185
RSLR D N+DALI+ +YP D+Y N Q
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYEAHQERVLARISKHNNQ 137
Score = 47 (21.6 bits), Expect = 2.3e-26, Sum P(3) = 2.3e-26
Identities = 28/116 (24%), Positives = 49/116 (42%)
Query: 332 SGSNGKNARNNRLSKLVD-YLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLS 390
S +G NN + +D L E + H L+ D+ Q Y+ +
Sbjct: 200 SDDSGLELDNNNTAVAIDPVLDGASEIELVFRPHPTLMENDDSA----QTRYIKTSGNAT 255
Query: 391 VRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSN---SLMIDPCKDKLQVLN 443
V HL +Y+A + AL+ E+ K +++NL ++S ++ I + VLN
Sbjct: 256 VDHLSKYLAVRLALE--ELRS---KGESNQMNLDTASEKQYTIYIATANGQFTVLN 306
Score = 37 (18.1 bits), Expect = 2.3e-26, Sum P(3) = 2.3e-26
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 238 GSDENDDANGDAGKDSSSADERSTEVRPKRRK 269
GS D NGD+ S+++ + E P ++
Sbjct: 167 GSGAED--NGDSSHCSNASTHSNQEAGPSNKR 196
>UNIPROTKB|Q99496 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000278 "mitotic cell cycle" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0001739
"sex chromatin" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071339 "MLL1 complex"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031519 "PcG
protein complex" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IDA] [GO:0035102 "PRC1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0071535
"RING-like zinc finger domain binding" evidence=IPI] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 EMBL:CH471067 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009948 GO:GO:0016604 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278 CleanEx:HS_BAP1
GO:GO:0035518 GO:GO:0035102 PDB:2H0D PDB:3RPG PDBsum:2H0D
PDBsum:3RPG PDB:3GS2 PDBsum:3GS2 GO:GO:0001739 EMBL:AL109865
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1 EMBL:Y10571 EMBL:AF141327
EMBL:AK314793 EMBL:BC012583 IPI:IPI00026993 RefSeq:NP_009143.1
UniGene:Hs.591490 PDB:3H8H PDB:3IXS PDBsum:3H8H PDBsum:3IXS
ProteinModelPortal:Q99496 SMR:Q99496 DIP:DIP-40034N IntAct:Q99496
MINT:MINT-1420125 STRING:Q99496 PhosphoSite:Q99496 DMDM:62901044
PaxDb:Q99496 PRIDE:Q99496 DNASU:6045 Ensembl:ENST00000367510
Ensembl:ENST00000453650 GeneID:6045 KEGG:hsa:6045 UCSC:uc001grc.1
GeneCards:GC01P185014 HGNC:HGNC:10061 HPA:HPA026803 MIM:608985
neXtProt:NX_Q99496 PharmGKB:PA34426 InParanoid:Q99496
PhylomeDB:Q99496 EvolutionaryTrace:Q99496 GenomeRNAi:6045
NextBio:23553 ArrayExpress:Q99496 Bgee:Q99496 CleanEx:HS_RNF2
Genevestigator:Q99496 GermOnline:ENSG00000121481 Uniprot:Q99496
Length = 336
Score = 248 (92.4 bits), Expect = 2.3e-26, Sum P(3) = 2.3e-26
Identities = 42/83 (50%), Positives = 56/83 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKY 168
RSLR D N+DALI+ +YP D+Y
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEY 120
Score = 47 (21.6 bits), Expect = 2.3e-26, Sum P(3) = 2.3e-26
Identities = 27/116 (23%), Positives = 49/116 (42%)
Query: 332 SGSNGKNARNNRLSKLVD-YLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLS 390
S +G NN + +D + E + H L+ D+ Q Y+ +
Sbjct: 200 SDDSGLELDNNNAAMAIDPVMDGASEIELVFRPHPTLMEKDDSA----QTRYIKTSGNAT 255
Query: 391 VRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSN---SLMIDPCKDKLQVLN 443
V HL +Y+A + AL+ E+ K +++NL ++S ++ I + VLN
Sbjct: 256 VDHLSKYLAVRLALE--ELRS---KGESNQMNLDTASEKQYTIYIATASGQFTVLN 306
Score = 38 (18.4 bits), Expect = 2.3e-26, Sum P(3) = 2.3e-26
Identities = 18/75 (24%), Positives = 28/75 (37%)
Query: 197 QTEALGRKRTPKSTSALRRS--HGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 254
Q L R + AL S G R +R + GS D NGD+ S+
Sbjct: 124 QERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAED--NGDSSHCSN 181
Query: 255 SADERSTEVRPKRRK 269
++ + E P ++
Sbjct: 182 ASTHSNQEAGPSNKR 196
>UNIPROTKB|Q5R9J5 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9601 "Pongo abelii" [GO:0000151 "ubiquitin ligase complex"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0031519 "PcG protein complex" evidence=ISS] [GO:0035102 "PRC1
complex" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005694 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0006351
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102 HOVERGEN:HBG079942
KO:K10695 CTD:6045 EMBL:CR859392 RefSeq:NP_001127433.1
UniGene:Pab.7792 ProteinModelPortal:Q5R9J5 SMR:Q5R9J5 PRIDE:Q5R9J5
GeneID:100174504 KEGG:pon:100174504 InParanoid:Q5R9J5
Uniprot:Q5R9J5
Length = 336
Score = 248 (92.4 bits), Expect = 2.3e-26, Sum P(3) = 2.3e-26
Identities = 42/83 (50%), Positives = 56/83 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKY 168
RSLR D N+DALI+ +YP D+Y
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEY 120
Score = 47 (21.6 bits), Expect = 2.3e-26, Sum P(3) = 2.3e-26
Identities = 27/116 (23%), Positives = 49/116 (42%)
Query: 332 SGSNGKNARNNRLSKLVD-YLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLS 390
S +G NN + +D + E + H L+ D+ Q Y+ +
Sbjct: 200 SDDSGLEPDNNNAAMAIDPVMDGASEIELVFRPHPTLMEKDDSA----QTRYIKTSGNAT 255
Query: 391 VRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSN---SLMIDPCKDKLQVLN 443
V HL +Y+A + AL+ E+ K +++NL ++S ++ I + VLN
Sbjct: 256 VDHLSKYLAVRLALE--ELRS---KGESNQMNLDTASEKQYTIYIATASGQFTVLN 306
Score = 38 (18.4 bits), Expect = 2.3e-26, Sum P(3) = 2.3e-26
Identities = 18/75 (24%), Positives = 28/75 (37%)
Query: 197 QTEALGRKRTPKSTSALRRS--HGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 254
Q L R + AL S G R +R + GS D NGD+ S+
Sbjct: 124 QERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAED--NGDSSHCSN 181
Query: 255 SADERSTEVRPKRRK 269
++ + E P ++
Sbjct: 182 ASTHSNQEAGPSNKR 196
>UNIPROTKB|A6QLQ0 [details] [associations]
symbol:RNF2 "RNF2 protein" species:9913 "Bos taurus"
[GO:0071535 "RING-like zinc finger domain binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0035102 "PRC1 complex"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0009948
"anterior/posterior axis specification" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0000278
"mitotic cell cycle" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0000122
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0009948 GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907
GO:GO:0071339 GO:GO:0000278 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP
CTD:6045 OrthoDB:EOG4R7VB1 EMBL:DAAA02043606 EMBL:BC148044
IPI:IPI00867396 RefSeq:NP_001094673.1 UniGene:Bt.102990 SMR:A6QLQ0
STRING:A6QLQ0 Ensembl:ENSBTAT00000000025 GeneID:540090
KEGG:bta:540090 InParanoid:A6QLQ0 NextBio:20878411 Uniprot:A6QLQ0
Length = 336
Score = 248 (92.4 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 42/83 (50%), Positives = 56/83 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKY 168
RSLR D N+DALI+ +YP D+Y
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEY 120
Score = 46 (21.3 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 27/116 (23%), Positives = 49/116 (42%)
Query: 332 SGSNGKNARNNRLSKLVD-YLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLS 390
S +G NN + +D + E + H L+ D+ Q Y+ +
Sbjct: 200 SDDSGLELDNNNATVAIDPVMDGASEIELVFRPHPTLMEKDDSA----QTRYIKTSGNAT 255
Query: 391 VRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSN---SLMIDPCKDKLQVLN 443
V HL +Y+A + AL+ E+ K +++NL ++S ++ I + VLN
Sbjct: 256 VDHLSKYLAVRLALE--ELRS---KGESNQMNLDTASEKQYTIYIATASGQFTVLN 306
Score = 38 (18.4 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 18/75 (24%), Positives = 28/75 (37%)
Query: 197 QTEALGRKRTPKSTSALRRS--HGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 254
Q L R + AL S G R +R + GS D NGD+ S+
Sbjct: 124 QERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAED--NGDSSHCSN 181
Query: 255 SADERSTEVRPKRRK 269
++ + E P ++
Sbjct: 182 ASTHSNQEAGPSNKR 196
>MGI|MGI:1101759 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0000151 "ubiquitin
ligase complex" evidence=ISO;IDA] [GO:0000278 "mitotic cell cycle"
evidence=IMP] [GO:0001702 "gastrulation with mouth forming second"
evidence=IMP] [GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=ISO] [GO:0009948 "anterior/posterior axis
specification" evidence=IMP] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISO] [GO:0071535 "RING-like
zinc finger domain binding" evidence=ISO] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101759
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0031519 GO:GO:0035102 GO:GO:0016574 PDB:2CKL
PDBsum:2CKL GO:GO:0001739 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1
EMBL:Y12880 EMBL:Y12783 EMBL:AK145767 EMBL:AK012358 EMBL:AK013124
EMBL:AK030319 EMBL:AK090066 EMBL:CT010297 EMBL:BC020122
IPI:IPI00133880 RefSeq:NP_035407.1 UniGene:Mm.474038
ProteinModelPortal:Q9CQJ4 SMR:Q9CQJ4 IntAct:Q9CQJ4
MINT:MINT-1341250 STRING:Q9CQJ4 PhosphoSite:Q9CQJ4 PaxDb:Q9CQJ4
PRIDE:Q9CQJ4 Ensembl:ENSMUST00000076110 GeneID:19821 KEGG:mmu:19821
UCSC:uc007cyx.1 InParanoid:Q9CQJ4 EvolutionaryTrace:Q9CQJ4
NextBio:297285 Bgee:Q9CQJ4 CleanEx:MM_RNF2 Genevestigator:Q9CQJ4
GermOnline:ENSMUSG00000026484 Uniprot:Q9CQJ4
Length = 336
Score = 248 (92.4 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 42/83 (50%), Positives = 56/83 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKY 168
RSLR D N+DALI+ +YP D+Y
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEY 120
Score = 46 (21.3 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 27/116 (23%), Positives = 49/116 (42%)
Query: 332 SGSNGKNARNNRLSKLVD-YLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLS 390
S +G NN + +D + E + H L+ D+ Q Y+ +
Sbjct: 200 SDDSGLELDNNNAAVAIDPVMDGASEIELVFRPHPTLMEKDDSA----QTRYIKTSGNAT 255
Query: 391 VRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSN---SLMIDPCKDKLQVLN 443
V HL +Y+A + AL+ E+ K +++NL ++S ++ I + VLN
Sbjct: 256 VDHLSKYLAVRLALE--ELRS---KGESNQMNLDTASEKQYTIYIATASGQFTVLN 306
Score = 38 (18.4 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 18/75 (24%), Positives = 28/75 (37%)
Query: 197 QTEALGRKRTPKSTSALRRS--HGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 254
Q L R + AL S G R +R + GS D NGD+ S+
Sbjct: 124 QERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAED--NGDSSHCSN 181
Query: 255 SADERSTEVRPKRRK 269
++ + E P ++
Sbjct: 182 ASTHSNQEAGPSNKR 196
>UNIPROTKB|E2RFW1 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071535 "RING-like zinc finger domain
binding" evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA]
[GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001739 "sex
chromatin" evidence=IEA] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 GO:GO:0001702
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:MELYFAP EMBL:AAEX03005159
Ensembl:ENSCAFT00000021407 Uniprot:E2RFW1
Length = 337
Score = 248 (92.4 bits), Expect = 3.8e-26, Sum P(3) = 3.8e-26
Identities = 42/83 (50%), Positives = 56/83 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKY 168
RSLR D N+DALI+ +YP D+Y
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEY 120
Score = 46 (21.3 bits), Expect = 3.8e-26, Sum P(3) = 3.8e-26
Identities = 27/116 (23%), Positives = 49/116 (42%)
Query: 332 SGSNGKNARNNRLSKLVD-YLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLS 390
S +G NN + +D + E + H L+ D+ Q Y+ +
Sbjct: 201 SDDSGLELDNNNATVAIDPVMDGASEIELVFRPHPTLMEKDDSA----QTRYIKTSGNAT 256
Query: 391 VRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSN---SLMIDPCKDKLQVLN 443
V HL +Y+A + AL+ E+ K +++NL ++S ++ I + VLN
Sbjct: 257 VDHLSKYLAVRLALE--ELRS---KGESNQMNLDTASEKQYTIYIATASGQFTVLN 307
Score = 37 (18.1 bits), Expect = 3.8e-26, Sum P(3) = 3.8e-26
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 238 GSDENDDANGDAGKDSSSADERSTEVRPKRRK 269
GS D NGD+ S+++ + E P ++
Sbjct: 168 GSGAED--NGDSSHCSNASTHSNQEAGPSNKR 197
>UNIPROTKB|F1S3N6 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518
"histone H2A monoubiquitination" evidence=IEA] [GO:0035102 "PRC1
complex" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0009948 "anterior/posterior axis specification" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP EMBL:CU915492
RefSeq:XP_003130427.1 Ensembl:ENSSSCT00000016959 GeneID:100517846
KEGG:ssc:100517846 Uniprot:F1S3N6
Length = 336
Score = 248 (92.4 bits), Expect = 3.8e-26, Sum P(3) = 3.8e-26
Identities = 42/83 (50%), Positives = 56/83 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKY 168
RSLR D N+DALI+ +YP D+Y
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEY 120
Score = 46 (21.3 bits), Expect = 3.8e-26, Sum P(3) = 3.8e-26
Identities = 27/116 (23%), Positives = 49/116 (42%)
Query: 332 SGSNGKNARNNRLSKLVD-YLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLS 390
S +G NN + +D + E + H L+ D+ Q Y+ +
Sbjct: 200 SDDSGLELDNNNAAVAIDPVMDGASEIELVFRPHPTLMEKDDSA----QTRYIKTSGNAT 255
Query: 391 VRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSN---SLMIDPCKDKLQVLN 443
V HL +Y+A + AL+ E+ K +++NL ++S ++ I + VLN
Sbjct: 256 VDHLSKYLAVRLALE--ELRS---KGESNQMNLDTASEKQYTIYIATASGQFTVLN 306
Score = 37 (18.1 bits), Expect = 3.8e-26, Sum P(3) = 3.8e-26
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 238 GSDENDDANGDAGKDSSSADERSTEVRPKRRK 269
GS D NGD+ S+++ + E P ++
Sbjct: 167 GSGAED--NGDSSHCSNASTHSNQEAGPSNKR 196
>RGD|1305491 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000151
"ubiquitin ligase complex" evidence=ISO;ISS] [GO:0000278 "mitotic
cell cycle" evidence=IEA;ISO] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA;ISO] [GO:0001739 "sex chromatin"
evidence=IEA;ISO] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISO;ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=IEA;ISO] [GO:0016574 "histone
ubiquitination" evidence=ISO] [GO:0016604 "nuclear body"
evidence=IEA;ISO] [GO:0031519 "PcG protein complex"
evidence=ISO;ISS] [GO:0035102 "PRC1 complex" evidence=ISO;ISS]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA;ISO]
[GO:0071339 "MLL1 complex" evidence=ISO;ISS] [GO:0071535 "RING-like
zinc finger domain binding" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 RGD:1305491 Prosite:PS00518
GO:GO:0005694 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 CTD:6045
OrthoDB:EOG4R7VB1 EMBL:BC098941 IPI:IPI00950204
RefSeq:NP_001020838.1 UniGene:Rn.19719 ProteinModelPortal:Q4KLY4
SMR:Q4KLY4 STRING:Q4KLY4 PhosphoSite:Q4KLY4
Ensembl:ENSRNOT00000065944 GeneID:304850 KEGG:rno:304850
UCSC:RGD:1305491 InParanoid:Q4KLY4 NextBio:653721
ArrayExpress:Q4KLY4 Genevestigator:Q4KLY4
GermOnline:ENSRNOG00000002454 Uniprot:Q4KLY4
Length = 308
Score = 248 (92.4 bits), Expect = 3.8e-26, Sum P(3) = 3.8e-26
Identities = 42/83 (50%), Positives = 56/83 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKY 168
RSLR D N+DALI+ +YP D+Y
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEY 120
Score = 45 (20.9 bits), Expect = 3.8e-26, Sum P(3) = 3.8e-26
Identities = 18/75 (24%), Positives = 31/75 (41%)
Query: 332 SGSNGKNARNNRLSKLVD-YLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLS 390
S +G NN + +D + E + H L+ D+ Q Y+ +
Sbjct: 200 SDDSGLELDNNNAAVAIDPVMDGASEIELVFRPHPTLMEKDDSA----QTRYIKTSGNAT 255
Query: 391 VRHLCQYVAHQTALQ 405
V HL +Y+A + AL+
Sbjct: 256 VDHLSKYLAVRLALE 270
Score = 38 (18.4 bits), Expect = 3.8e-26, Sum P(3) = 3.8e-26
Identities = 18/75 (24%), Positives = 28/75 (37%)
Query: 197 QTEALGRKRTPKSTSALRRS--HGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 254
Q L R + AL S G R +R + GS D NGD+ S+
Sbjct: 124 QERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAED--NGDSSHCSN 181
Query: 255 SADERSTEVRPKRRK 269
++ + E P ++
Sbjct: 182 ASTHSNQEAGPSNKR 196
>ZFIN|ZDB-GENE-030131-5243 [details] [associations]
symbol:rnf2 "ring finger protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033339 "pectoral fin development" evidence=IMP] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0016604 "nuclear body"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0000278
"mitotic cell cycle" evidence=ISS] [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5243 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0033339 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 EMBL:AY576996
EMBL:BC044472 EMBL:AF196346 IPI:IPI00499481 RefSeq:NP_571288.1
UniGene:Dr.31086 ProteinModelPortal:Q803I4 SMR:Q803I4 STRING:Q803I4
Ensembl:ENSDART00000017034 GeneID:327035 KEGG:dre:327035 CTD:6045
InParanoid:Q803I4 OrthoDB:EOG4R7VB1 NextBio:20809851 Bgee:Q803I4
Uniprot:Q803I4
Length = 336
Score = 245 (91.3 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 44/100 (44%), Positives = 57/100 (57%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYXXXXXXXXXXXXXRNKQ 185
RSLR D N+DALI+ +YP D+Y N Q
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYEAHQERVLARISKHNNQ 137
Score = 56 (24.8 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 29/127 (22%), Positives = 53/127 (41%)
Query: 326 TRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCC 385
T+ SG + NA N + L + E + H L+ ++ Q Y+
Sbjct: 197 TKTSDDSGLDMDNATENGGGDIA--LDGVSEIELVFRPHPTLMEKED----AAQTRYIKT 250
Query: 386 RPTLSVRHLCQYVAHQTALQ-------ASEIEIYLVKELHSKINLPSSSNSLMIDPCKDK 438
+V HL +Y+A + AL+ AS I + E I +P++SN +
Sbjct: 251 SGNATVDHLSKYLAVRLALEEMRKNGEASPINVEAASEKQYTIYIPTASNQFTVLNGSFS 310
Query: 439 LQVLNEQ 445
L++++E+
Sbjct: 311 LELVSEK 317
>TAIR|locus:2825930 [details] [associations]
symbol:AT1G28327 "AT1G28327" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 IPI:IPI00534201 RefSeq:NP_174154.2
UniGene:At.51181 PRIDE:F4HWK6 EnsemblPlants:AT1G28327.1
GeneID:839728 KEGG:ath:AT1G28327 OMA:CEMYVAP Uniprot:F4HWK6
Length = 274
Score = 247 (92.0 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 81/291 (27%), Positives = 139/291 (47%)
Query: 184 KQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGR--YRDTPLRGRRNYR--MTELQGS 239
KQ QAS QT +RQ + KR + R G+ +R P +G R R + + +G
Sbjct: 7 KQGQASYMQTLKRQAKVDSGKRMSTNFVIRRDPTGQCIFRPIPFKGMRKVRKHVDDDEGW 66
Query: 240 DENDDANGDAGKDSSSADERSTEVRPKRRKRWYGARFXXXXXXXXXXXXXXDEND-SEVH 298
G SSS D S P + R D++D S
Sbjct: 67 SGGSKKVKVRGLTSSSGDGDSLSY-PFENETTIRNREKDRLMLEIFGPESTDDSDESGTE 125
Query: 299 RESMGASV-GLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEK 357
E M ++ L+ L WGK G RS + G+ ++ N + + +
Sbjct: 126 EEFMETNLMSLVS----LQWGKRGKRSMRK-----GTWKRHILENHVGQH-------KNT 169
Query: 358 DDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQ-YVAHQTALQASEIEIYLVKE 416
D++D+ ++LVS+D IP LQ P + C+P ++++ LC+ YVA QA +IE+Y+VKE
Sbjct: 170 QDEMDIQVLLVSMDASVIPNLQNPQVSCKPNVTLKSLCEMYVAPYVEAQAEKIEMYVVKE 229
Query: 417 LHSKINLPSSSNSLMIDPCKDKLQVLNEQETLTGLQTQNLGHGFLLLAYQK 467
L +++ MIDP +D+++++N+++++ GL+ N +G++++ Y K
Sbjct: 230 LVAELT--------MIDPHRDRVEIVNKEDSVGGLRMYNFNNGYVIIGYMK 272
>UNIPROTKB|Q7ZWM8 [details] [associations]
symbol:rnf2-b "E3 ubiquitin-protein ligase RING2-B"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:BC046935 UniGene:Xl.76096
ProteinModelPortal:Q7ZWM8 SMR:Q7ZWM8 Xenbase:XB-GENE-6493980
Uniprot:Q7ZWM8
Length = 343
Score = 244 (91.0 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 42/83 (50%), Positives = 55/83 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKY 168
RSLR D N+DALI+ +YP D+Y
Sbjct: 94 RSLRPDPNFDALISKIYPSRDEY 116
Score = 37 (18.1 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 379 QQPYLCCRPTLSVRHLCQYVAHQTALQ 405
Q Y+ +V HL +Y+A + AL+
Sbjct: 249 QTRYVKTTANATVDHLSKYLALRIALE 275
>UNIPROTKB|Q66J69 [details] [associations]
symbol:rnf2-a "E3 ubiquitin-protein ligase RING2-A"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 KO:K10695 EMBL:BC081039 RefSeq:NP_001087647.1
UniGene:Xl.6549 ProteinModelPortal:Q66J69 SMR:Q66J69 GeneID:447471
KEGG:xla:447471 CTD:447471 Xenbase:XB-GENE-6253865 Uniprot:Q66J69
Length = 344
Score = 244 (91.0 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 42/83 (50%), Positives = 55/83 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKY 168
RSLR D N+DALI+ +YP D+Y
Sbjct: 95 RSLRPDPNFDALISKIYPSRDEY 117
Score = 37 (18.1 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 379 QQPYLCCRPTLSVRHLCQYVAHQTALQ 405
Q Y+ +V HL +Y+A + AL+
Sbjct: 250 QTRYVKTTANATVDHLSKYLALRIALE 276
>UNIPROTKB|F1MUV0 [details] [associations]
symbol:RING1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048593 "camera-type eye morphogenesis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:QSASKTW EMBL:DAAA02054894
EMBL:DAAA02054895 IPI:IPI00718372 Ensembl:ENSBTAT00000054269
ArrayExpress:F1MUV0 Uniprot:F1MUV0
Length = 382
Score = 246 (91.7 bits), Expect = 8.1e-19, P = 8.1e-19
Identities = 55/169 (32%), Positives = 85/169 (50%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 10 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 69
Query: 146 RSLRDDLNYDALIAALYPDIDKYXXXXXXXXXXXXXRNKQIQASIAQTFQRQTEALGRKR 205
RSLR D N+DALI+ +YP ++Y + Q QA ++ + + E L +
Sbjct: 70 RSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQ-QA-LSSSIE---EGLRMQA 124
Query: 206 TPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 254
++ R G + T + G +G + +D + D+ DS+
Sbjct: 125 MHRAQRVRRPMPGSDQTTTMSGGEG---EPGEGEGDGEDVSSDSAPDSA 170
>UNIPROTKB|A1YER5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9595 "Gorilla gorilla gorilla" [GO:0031519 "PcG protein
complex" evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:DQ976446 ProteinModelPortal:A1YER5
SMR:A1YER5 PRIDE:A1YER5 Uniprot:A1YER5
Length = 377
Score = 245 (91.3 bits), Expect = 9.6e-19, P = 9.6e-19
Identities = 55/169 (32%), Positives = 85/169 (50%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 65
Query: 146 RSLRDDLNYDALIAALYPDIDKYXXXXXXXXXXXXXRNKQIQASIAQTFQRQTEALGRKR 205
RSLR D N+DALI+ +YP ++Y + Q QA ++ + + E L +
Sbjct: 66 RSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQ-QA-LSSSIE---EGLRMQA 120
Query: 206 TPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 254
++ R G + T + G +G + +D + D+ DS+
Sbjct: 121 MHRAQRVRRPIPGSDQTTTMSGGEG---DPGEGEGDGEDVSSDSAPDSA 166
>UNIPROTKB|A1YFY1 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9597 "Pan paniscus" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:DQ977176 ProteinModelPortal:A1YFY1
SMR:A1YFY1 Uniprot:A1YFY1
Length = 377
Score = 245 (91.3 bits), Expect = 9.6e-19, P = 9.6e-19
Identities = 55/169 (32%), Positives = 85/169 (50%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 65
Query: 146 RSLRDDLNYDALIAALYPDIDKYXXXXXXXXXXXXXRNKQIQASIAQTFQRQTEALGRKR 205
RSLR D N+DALI+ +YP ++Y + Q QA ++ + + E L +
Sbjct: 66 RSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQ-QA-LSSSIE---EGLRMQA 120
Query: 206 TPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 254
++ R G + T + G +G + +D + D+ DS+
Sbjct: 121 MHRAQRVRRPIPGSDQTTTMSGGEG---EPGEGEGDGEDVSSDSAPDSA 166
>UNIPROTKB|A2T6X5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9598 "Pan troglodytes" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
CTD:6015 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 EMBL:DQ977325 RefSeq:NP_001074951.1
UniGene:Ptr.3708 ProteinModelPortal:A2T6X5 SMR:A2T6X5 STRING:A2T6X5
Ensembl:ENSPTRT00000065372 GeneID:462604 KEGG:ptr:462604
InParanoid:A2T6X5 NextBio:20841844 Uniprot:A2T6X5
Length = 377
Score = 245 (91.3 bits), Expect = 9.6e-19, P = 9.6e-19
Identities = 55/169 (32%), Positives = 85/169 (50%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 65
Query: 146 RSLRDDLNYDALIAALYPDIDKYXXXXXXXXXXXXXRNKQIQASIAQTFQRQTEALGRKR 205
RSLR D N+DALI+ +YP ++Y + Q QA ++ + + E L +
Sbjct: 66 RSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQ-QA-LSSSIE---EGLRMQA 120
Query: 206 TPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 254
++ R G + T + G +G + +D + D+ DS+
Sbjct: 121 MHRAQRVRRPIPGSDQTTTMSGGEG---EPGEGEGDGEDVSSDSAPDSA 166
>UNIPROTKB|Q8WMN5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9544 "Macaca mulatta" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102 CTD:6015
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OrthoDB:EOG4SXND4 EMBL:AJ421778 RefSeq:NP_001108431.1
UniGene:Mmu.17368 ProteinModelPortal:Q8WMN5 SMR:Q8WMN5
STRING:Q8WMN5 GeneID:718137 KEGG:mcc:718137 InParanoid:Q8WMN5
NextBio:19978408 Uniprot:Q8WMN5
Length = 377
Score = 245 (91.3 bits), Expect = 9.6e-19, P = 9.6e-19
Identities = 55/169 (32%), Positives = 85/169 (50%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 65
Query: 146 RSLRDDLNYDALIAALYPDIDKYXXXXXXXXXXXXXRNKQIQASIAQTFQRQTEALGRKR 205
RSLR D N+DALI+ +YP ++Y + Q QA ++ + + E L +
Sbjct: 66 RSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQ-QA-LSSSIE---EGLRMQA 120
Query: 206 TPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 254
++ R G + T + G +G + +D + D+ DS+
Sbjct: 121 MHRAQRVRRPIPGSDQTTTMSGGEG---EPGEGEGDGEDVSSDSAPDSA 166
>UNIPROTKB|Q5TJF3 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9615 "Canis lupus familiaris" [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0048593 "camera-type
eye morphogenesis" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0035518 "histone
H2A monoubiquitination" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AJ630366 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 RefSeq:NP_001041593.1 UniGene:Cfa.40924
ProteinModelPortal:Q5TJF3 SMR:Q5TJF3 STRING:Q5TJF3
Ensembl:ENSCAFT00000001442 Ensembl:ENSCAFT00000044064 GeneID:607905
KEGG:cfa:607905 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 InParanoid:Q5TJF3 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 NextBio:20893594 Uniprot:Q5TJF3
Length = 406
Score = 246 (91.7 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 55/169 (32%), Positives = 85/169 (50%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYXXXXXXXXXXXXXRNKQIQASIAQTFQRQTEALGRKR 205
RSLR D N+DALI+ +YP ++Y + Q QA ++ + + E L +
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQ-QA-LSSSIE---EGLRMQA 149
Query: 206 TPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 254
++ R G + T + G +G + +D + D+ DS+
Sbjct: 150 MHRAQRVRRPMPGSDQTTTMSGGEG---EPGEGEGDGEDVSSDSAPDSA 195
>UNIPROTKB|A5D9P0 [details] [associations]
symbol:RING1 "Ring finger protein 1" species:9823 "Sus
scrofa" [GO:0048593 "camera-type eye morphogenesis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:CT737383 EMBL:BX640585 RefSeq:NP_001177164.1 UniGene:Ssc.5967
ProteinModelPortal:A5D9P0 SMR:A5D9P0 STRING:A5D9P0
Ensembl:ENSSSCT00000001648 GeneID:100153162 KEGG:ssc:100153162
ArrayExpress:A5D9P0 Uniprot:A5D9P0
Length = 406
Score = 246 (91.7 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 55/169 (32%), Positives = 85/169 (50%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYXXXXXXXXXXXXXRNKQIQASIAQTFQRQTEALGRKR 205
RSLR D N+DALI+ +YP ++Y + Q QA ++ + + E L +
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQ-QA-LSSSIE---EGLRMQA 149
Query: 206 TPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 254
++ R G + T + G +G + +D + D+ DS+
Sbjct: 150 MHRAQRVRRPMPGSDQTTTMSGGEG---EPGEGEGDGEDVSSDSAPDSA 195
>UNIPROTKB|Q06587 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0048593 "camera-type eye
morphogenesis" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0031519 "PcG protein complex" evidence=IDA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IDA]
[GO:0035102 "PRC1 complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AL031228 GO:GO:0035518 GO:GO:0035102
EMBL:AL645940 EMBL:AL844527 EMBL:CR759733 EMBL:CR759786
EMBL:AL713971 EMBL:CR847841 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 EMBL:Z14000 EMBL:BT007352 EMBL:AK289355
EMBL:CR547129 EMBL:BC002922 EMBL:BC051866 IPI:IPI00455876
IPI:IPI00641330 PIR:A47380 RefSeq:NP_002922.2 UniGene:Hs.631989
ProteinModelPortal:Q06587 SMR:Q06587 DIP:DIP-42043N IntAct:Q06587
MINT:MINT-1327105 STRING:Q06587 PhosphoSite:Q06587 DMDM:90110053
PaxDb:Q06587 PeptideAtlas:Q06587 PRIDE:Q06587 DNASU:6015
Ensembl:ENST00000374656 Ensembl:ENST00000383212
Ensembl:ENST00000415941 Ensembl:ENST00000427374
Ensembl:ENST00000430233 Ensembl:ENST00000436128 GeneID:6015
KEGG:hsa:6015 UCSC:uc003odk.3 GeneCards:GC06P033177 HGNC:HGNC:10018
HPA:HPA008701 MIM:602045 neXtProt:NX_Q06587 PharmGKB:PA34393
InParanoid:Q06587 GenomeRNAi:6015 NextBio:23467 ArrayExpress:Q06587
Bgee:Q06587 CleanEx:HS_RING1 Genevestigator:Q06587
GermOnline:ENSG00000204227 Uniprot:Q06587
Length = 406
Score = 245 (91.3 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 55/169 (32%), Positives = 85/169 (50%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYXXXXXXXXXXXXXRNKQIQASIAQTFQRQTEALGRKR 205
RSLR D N+DALI+ +YP ++Y + Q QA ++ + + E L +
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQ-QA-LSSSIE---EGLRMQA 149
Query: 206 TPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 254
++ R G + T + G +G + +D + D+ DS+
Sbjct: 150 MHRAQRVRRPIPGSDQTTTMSGGEG---EPGEGEGDGEDVSSDSAPDSA 195
>RGD|3576 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA;ISO]
[GO:0001739 "sex chromatin" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0016574 "histone ubiquitination" evidence=ISO]
[GO:0016604 "nuclear body" evidence=ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO;ISS]
[GO:0035102 "PRC1 complex" evidence=ISO;ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0048593 "camera-type eye morphogenesis" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Pfam:PF00097 RGD:3576 Prosite:PS00518 GO:GO:0005737 GO:GO:0045892
GO:GO:0009952 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907 GO:GO:0035518
GO:GO:0035102 EMBL:BX883042 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917 HOVERGEN:HBG079942
KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4 EMBL:BC098635 EMBL:X95474
IPI:IPI00417840 IPI:IPI00742451 RefSeq:NP_997714.2 UniGene:Rn.116589
ProteinModelPortal:Q6MGB6 SMR:Q6MGB6 STRING:Q6MGB6
Ensembl:ENSRNOT00000000543 GeneID:309626 KEGG:rno:309626
UCSC:RGD:3576 InParanoid:Q6MGB6 NextBio:661076 Genevestigator:Q6MGB6
GermOnline:ENSRNOG00000000467 Uniprot:Q6MGB6
Length = 406
Score = 245 (91.3 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 55/169 (32%), Positives = 85/169 (50%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYXXXXXXXXXXXXXRNKQIQASIAQTFQRQTEALGRKR 205
RSLR D N+DALI+ +YP ++Y + Q QA ++ + + E L +
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQ-QA-LSSSIE---EGLRMQA 149
Query: 206 TPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 254
++ R G + T + G +G + +D + D+ DS+
Sbjct: 150 MHRAQRVRRPMPGSDQTTTMSGGEG---EPGEGEGDGEDISSDSAPDSA 195
>MGI|MGI:1101770 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048593 "camera-type eye morphogenesis"
evidence=IGI] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101770 Pfam:PF00097
Prosite:PS00518 GO:GO:0005737 GO:GO:0045892 GO:GO:0009952
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
EMBL:AF100956 GO:GO:0035518 GO:GO:0031519 GO:GO:0035102
GO:GO:0016574 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:Y12881 EMBL:AK154962 EMBL:AK155509 EMBL:CT010219 EMBL:BC009070
EMBL:BC082771 IPI:IPI00344616 IPI:IPI00742283 IPI:IPI00742392
RefSeq:NP_033092.3 UniGene:Mm.20343 ProteinModelPortal:O35730
SMR:O35730 IntAct:O35730 MINT:MINT-158295 STRING:O35730
PhosphoSite:O35730 PaxDb:O35730 PRIDE:O35730
Ensembl:ENSMUST00000025183 GeneID:19763 KEGG:mmu:19763
UCSC:uc008cas.2 InParanoid:O35730 NextBio:297212 Bgee:O35730
CleanEx:MM_RING1 Genevestigator:O35730
GermOnline:ENSMUSG00000024325 Uniprot:O35730
Length = 406
Score = 244 (91.0 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 68/191 (35%), Positives = 96/191 (50%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYXXXXXXXXXXXXXRNKQIQASIAQTFQRQTEALGRKR 205
RSLR D N+DALI+ +YP ++Y + Q QA ++ + + E L +
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQ-QA-LSSSIE---EGLRMQ- 148
Query: 206 TPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKD--SSSADERSTEV 263
A+ R+ R R P+ G + T G E + GD G+D S SA + +
Sbjct: 149 ------AMHRAQ-RVR-RPMPGS-DQTATMSGGEGEPGEGEGD-GEDVSSDSAPDSAPGP 198
Query: 264 RPKRRKRWYGA 274
PKR R GA
Sbjct: 199 APKR-PRGAGA 208
>FB|FBgn0003330 [details] [associations]
symbol:Sce "Sex combs extra" species:7227 "Drosophila
melanogaster" [GO:0045498 "sex comb development" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IDA]
[GO:0006342 "chromatin silencing" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IMP]
[GO:0008278 "cohesin complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0030713 "ovarian follicle cell stalk
formation" evidence=IMP] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0035102 "PRC1
complex" evidence=TAS] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IMP] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 EMBL:AE014297
GO:GO:0007126 GO:GO:0005730 GO:GO:0022008 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006342 InterPro:IPR017907 GO:GO:0030713
GO:GO:0045498 GO:GO:0035518 GO:GO:0035102 GO:GO:0030708
GO:GO:0008278 GO:GO:0007062 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 KO:K10695 EMBL:AJ001514 EMBL:AY058535
RefSeq:NP_477509.1 UniGene:Dm.4170 ProteinModelPortal:Q9VB08
SMR:Q9VB08 DIP:DIP-21764N IntAct:Q9VB08 MINT:MINT-860974
STRING:Q9VB08 PaxDb:Q9VB08 PRIDE:Q9VB08 EnsemblMetazoa:FBtr0085245
GeneID:43327 KEGG:dme:Dmel_CG5595 CTD:43327 FlyBase:FBgn0003330
InParanoid:Q9VB08 OMA:MELYFAP OrthoDB:EOG489332 PhylomeDB:Q9VB08
GenomeRNAi:43327 NextBio:833362 Bgee:Q9VB08 GermOnline:CG5595
Uniprot:Q9VB08
Length = 435
Score = 239 (89.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 41/83 (49%), Positives = 55/83 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKY 168
RSLR D N+D LI+ +YP ++Y
Sbjct: 93 RSLRADPNFDLLISKIYPSREEY 115
>UNIPROTKB|Q3KNV8 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 EMBL:CH471131 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 CTD:10336 KO:K11488 EMBL:AJ001019 EMBL:BC107061
IPI:IPI00007279 IPI:IPI00827991 RefSeq:NP_006306.2
UniGene:Hs.144309 UniGene:Hs.731755 ProteinModelPortal:Q3KNV8
SMR:Q3KNV8 IntAct:Q3KNV8 STRING:Q3KNV8 PhosphoSite:Q3KNV8
DMDM:121942537 PRIDE:Q3KNV8 Ensembl:ENST00000362003
Ensembl:ENST00000470161 Ensembl:ENST00000505655 GeneID:10336
KEGG:hsa:10336 UCSC:uc003gbe.3 GeneCards:GC04P000691
HGNC:HGNC:10066 HPA:HPA018487 neXtProt:NX_Q3KNV8 PharmGKB:PA34433
InParanoid:Q3KNV8 OMA:THLKKFI OrthoDB:EOG49ZXPZ ChiTaRS:PCGF3
GenomeRNAi:10336 NextBio:39203 ArrayExpress:Q3KNV8 Bgee:Q3KNV8
CleanEx:HS_PCGF3 Genevestigator:Q3KNV8 Uniprot:Q3KNV8
Length = 242
Score = 134 (52.2 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
Score = 69 (29.3 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 319 KGGIRSHTRHGSVSG--SNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIP 376
K + SH R+G S+ K A + + DY +S D+Q+ + + + ++
Sbjct: 116 KQHLDSH-RNGETKADDSSNKEAAEEKPEEDNDYHRS----DEQVS---ICLECNSSKLR 167
Query: 377 GLQQPYLCCRPTLSVRHLCQYVAHQTALQA-SEIEIYLVKELHSK 420
GL++ ++ C +V HL +++A + L + +E++I +E+ K
Sbjct: 168 GLKRKWIRCSAQATVLHLKKFIAKKLNLSSFNELDILCNEEILGK 212
>UNIPROTKB|I3LAF0 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031519 "PcG protein complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 OMA:THLKKFI EMBL:FP102972
Ensembl:ENSSSCT00000030851 Uniprot:I3LAF0
Length = 203
Score = 134 (52.2 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
Score = 60 (26.2 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 21/90 (23%), Positives = 44/90 (48%)
Query: 319 KGGIRSHTRHGSVSG--SNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIP 376
K + SH R+G S+ K A + + DY +S D+Q+ + + + ++
Sbjct: 116 KQHLDSH-RNGETKAEDSSNKEAAEEKQEEDGDYHRS----DEQVS---ICLECNSSKLR 167
Query: 377 GLQQPYLCCRPTLSVRHLCQYVAHQTALQA 406
GL++ ++ C +V HL +++A + L +
Sbjct: 168 GLKRKWIRCSAQATVLHLKKFIAKKLNLSS 197
>UNIPROTKB|Q2KJ29 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9913 "Bos taurus" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
HOVERGEN:HBG052826 eggNOG:NOG277991 HOGENOM:HOG000231946
EMBL:BC105550 IPI:IPI00718391 RefSeq:NP_001040032.1
UniGene:Bt.13972 ProteinModelPortal:Q2KJ29 SMR:Q2KJ29 PRIDE:Q2KJ29
GeneID:615967 KEGG:bta:615967 CTD:10336 InParanoid:Q2KJ29 KO:K11488
NextBio:20899886 Uniprot:Q2KJ29
Length = 242
Score = 134 (52.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
Score = 66 (28.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 22/97 (22%), Positives = 49/97 (50%)
Query: 327 RHGSVSG--SNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLC 384
R+G S+ K A + + DY +S D+Q+ + + + ++ GL++ ++
Sbjct: 123 RNGETKADDSSNKEAAEEKQEEDGDYHRS----DEQVS---ICLECNSSKLRGLKRKWIR 175
Query: 385 CRPTLSVRHLCQYVAHQTALQA-SEIEIYLVKELHSK 420
C +V HL +++A + L + +E++I +E+ K
Sbjct: 176 CSAQATVLHLKKFIAKKLNLSSFNELDILCNEEILGK 212
>UNIPROTKB|F1NLA3 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031519
"PcG protein complex" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 OMA:THLKKFI EMBL:AADN02065914
IPI:IPI00588017 Ensembl:ENSGALT00000024747 Uniprot:F1NLA3
Length = 245
Score = 133 (51.9 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 9 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 59
Score = 65 (27.9 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 21/103 (20%), Positives = 47/103 (45%)
Query: 319 KGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGL 378
K + SH R+G N + + D D+Q+ + + + ++ GL
Sbjct: 119 KQHLDSH-RNGETKTDENSNKETSEEKQEED--NDYHRSDEQVS---ICLECNSSKLRGL 172
Query: 379 QQPYLCCRPTLSVRHLCQYVAHQTALQA-SEIEIYLVKELHSK 420
++ ++ C +V HL +++A + L + +E++I +E+ K
Sbjct: 173 KRKWIRCSAQATVLHLKKFIAKKLNLSSFNELDILCNEEILGK 215
>MGI|MGI:1916837 [details] [associations]
symbol:Pcgf3 "polycomb group ring finger 3" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1916837
Pfam:PF00097 Prosite:PS00518 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826 eggNOG:NOG277991
HOGENOM:HOG000231946 CTD:10336 KO:K11488 OMA:THLKKFI
OrthoDB:EOG49ZXPZ EMBL:AK033609 EMBL:AK089091 EMBL:BC049266
IPI:IPI00225141 IPI:IPI00471142 RefSeq:NP_766304.2
UniGene:Mm.261218 UniGene:Mm.486543 ProteinModelPortal:Q8BTQ0
SMR:Q8BTQ0 IntAct:Q8BTQ0 PhosphoSite:Q8BTQ0 PRIDE:Q8BTQ0
Ensembl:ENSMUST00000046975 Ensembl:ENSMUST00000112597 GeneID:69587
KEGG:mmu:69587 UCSC:uc008yod.1 UCSC:uc008yoe.1 InParanoid:Q8BTQ0
NextBio:329856 Bgee:Q8BTQ0 CleanEx:MM_PCGF3 Genevestigator:Q8BTQ0
Uniprot:Q8BTQ0
Length = 241
Score = 134 (52.2 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
Score = 63 (27.2 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 23/105 (21%), Positives = 50/105 (47%)
Query: 319 KGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLD--EQRIP 376
KG S +H + NG+ ++ +K + E+ D V + L+ ++
Sbjct: 109 KGEACSAKQH--LDPRNGETKADDNSNKETAEEKQEEDNDYHRSDEQVSICLECNSSKLR 166
Query: 377 GLQQPYLCCRPTLSVRHLCQYVAHQTALQA-SEIEIYLVKELHSK 420
GL++ ++ C +V HL +++A + L + +E++I +E+ K
Sbjct: 167 GLKRKWIRCSAQATVLHLKKFIAKKLNLSSFNELDILCNEEILGK 211
>UNIPROTKB|E1BAF7 [details] [associations]
symbol:E1BAF7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031519 "PcG protein complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 IPI:IPI00718391 OMA:THLKKFI
EMBL:DAAA02018518 EMBL:DAAA02018519 EMBL:DAAA02018520
EMBL:DAAA02018521 EMBL:DAAA02018522 Ensembl:ENSBTAT00000018621
Uniprot:E1BAF7
Length = 242
Score = 134 (52.2 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
Score = 62 (26.9 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 19/83 (22%), Positives = 43/83 (51%)
Query: 339 ARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYV 398
A ++R SK DY Q ++ + + + ++ GL++ ++ C +V HL +++
Sbjct: 131 ASHDRESKN-DYKQKNGDRRRSGSAVSICLECNSSKLRGLKRKWIRCSAQATVLHLKKFI 189
Query: 399 AHQTALQA-SEIEIYLVKELHSK 420
A + L + +E++I +E+ K
Sbjct: 190 AKKLNLSSFNELDILCNEEILGK 212
>UNIPROTKB|F1PGG1 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AAEX03002650
Ensembl:ENSCAFT00000026535 Uniprot:F1PGG1
Length = 286
Score = 134 (52.2 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 50 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 100
Score = 66 (28.3 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 22/97 (22%), Positives = 49/97 (50%)
Query: 327 RHGSVSG--SNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLC 384
R+G S+ K A + + DY +S D+Q+ + + + ++ GL++ ++
Sbjct: 167 RNGETKADDSSNKEAAEEKQEEDNDYHRS----DEQVS---ICLECNSSKLRGLKRKWIR 219
Query: 385 CRPTLSVRHLCQYVAHQTALQA-SEIEIYLVKELHSK 420
C +V HL +++A + L + +E++I +E+ K
Sbjct: 220 CSAQATVLHLKKFIAKKLNLSSFNELDILCNEEILGK 256
>UNIPROTKB|Q07G17 [details] [associations]
symbol:pcgf3 "Polycomb group RING finger protein 3"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0031519 "PcG
protein complex" evidence=ISS] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HOVERGEN:HBG052826
eggNOG:NOG277991 HOGENOM:HOG000231946 CTD:10336 KO:K11488
EMBL:CR855442 RefSeq:NP_001016847.1 UniGene:Str.21149
ProteinModelPortal:Q07G17 SMR:Q07G17 GeneID:549601 KEGG:xtr:549601
Xenbase:XB-GENE-987640 Uniprot:Q07G17
Length = 242
Score = 133 (51.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
Score = 58 (25.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 14/64 (21%), Positives = 36/64 (56%)
Query: 358 DDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQA-SEIEIYLVKE 416
D+Q+ + + + ++ GL++ ++ C +V HL +++A + L + +E++I +E
Sbjct: 152 DEQVS---ICLECNSSKLRGLKRKWIRCSAQATVLHLKKFIAKKLNLSSFNELDILCNEE 208
Query: 417 LHSK 420
+ K
Sbjct: 209 ILGK 212
>UNIPROTKB|J9P325 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 OMA:THLKKFI EMBL:AAEX03002650
Ensembl:ENSCAFT00000044431 Uniprot:J9P325
Length = 269
Score = 134 (52.2 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
Score = 57 (25.1 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 12/56 (21%), Positives = 32/56 (57%)
Query: 366 VLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQA-SEIEIYLVKELHSK 420
+ + + ++ GL++ ++ C +V HL +++A + L + +E++I +E+ K
Sbjct: 184 ICLECNSSKLRGLKRKWIRCSAQATVLHLKKFIAKKLNLSSFNELDILCNEEILGK 239
>UNIPROTKB|C9J3G7 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC139887 HOGENOM:HOG000231946
HGNC:HGNC:10066 ChiTaRS:PCGF3 EMBL:AC107464 IPI:IPI00878168
ProteinModelPortal:C9J3G7 SMR:C9J3G7 STRING:C9J3G7
Ensembl:ENST00000433814 ArrayExpress:C9J3G7 Bgee:C9J3G7
Uniprot:C9J3G7
Length = 109
Score = 134 (52.2 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>UNIPROTKB|C9JYD0 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC139887 HGNC:HGNC:10066 ChiTaRS:PCGF3
EMBL:AC107464 IPI:IPI00879042 ProteinModelPortal:C9JYD0 SMR:C9JYD0
STRING:C9JYD0 Ensembl:ENST00000427463 ArrayExpress:C9JYD0
Bgee:C9JYD0 Uniprot:C9JYD0
Length = 62
Score = 134 (52.2 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>UNIPROTKB|F1LUN6 [details] [associations]
symbol:F1LUN6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
IPI:IPI00562660 Ensembl:ENSRNOT00000032989 Uniprot:F1LUN6
Length = 167
Score = 134 (52.2 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 31/104 (29%), Positives = 49/104 (47%)
Query: 67 DGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDK 126
DG+E +G +E ++ LS++ + C IC G + T+ ECLH FC+ CI K
Sbjct: 26 DGSEFRHPNPEREGSDEEERLLPLSEMIPYISCSICKGYLIDAATITECLHTFCKSCIVK 85
Query: 127 AMRLGNNECPACR--THCAS-RRSLRDDLNYDALIAALYPDIDK 167
+N CP C H A +LR D ++ L +++
Sbjct: 86 HFE-HSNRCPKCNIIVHEAKPHNNLRMDPQLQNIVYKLVSGLEE 128
>UNIPROTKB|I3LDV4 [details] [associations]
symbol:I3LDV4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035518 "histone H2A monoubiquitination" evidence=IEA]
[GO:0031519 "PcG protein complex" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463
Ensembl:ENSSSCT00000029600 OMA:ISECSHT Uniprot:I3LDV4
Length = 269
Score = 124 (48.7 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 76 SSGDGEK-DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE 134
S G G +E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ +
Sbjct: 25 SLGKGRSGEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKY 83
Query: 135 CPAC 138
CP C
Sbjct: 84 CPMC 87
Score = 65 (27.9 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 358 DDQLDMHLVLVSLDEQRIPG-LQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKE 416
D+QL + L +S + + LQ Y+ C VRHL + + H+ L + ++L E
Sbjct: 168 DEQLSLCLERLSSGKDKNKSVLQNKYVRCSVRAEVRHLRKVLCHRLMLSPQHVLLFLFLE 227
>RGD|1549782 [details] [associations]
symbol:Pcgf1 "polycomb group ring finger 1" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=IEA;ISO;ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 RGD:1549782 Prosite:PS00518
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GO:GO:0035518 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 HOGENOM:HOG000231946 CTD:84759 KO:K11487
OrthoDB:EOG4894N6 EMBL:AY662670 IPI:IPI00464918
RefSeq:NP_001007001.1 UniGene:Rn.203514 ProteinModelPortal:Q6DLV9
SMR:Q6DLV9 PhosphoSite:Q6DLV9 PRIDE:Q6DLV9 GeneID:312480
KEGG:rno:312480 UCSC:RGD:1549782 InParanoid:Q6DLV9 NextBio:664916
Genevestigator:Q6DLV9 Uniprot:Q6DLV9
Length = 243
Score = 120 (47.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 19 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPMC 73
Score = 63 (27.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 358 DDQLDMHLVLVSLDEQRIPG-LQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKE 416
D+QL + L +S + + LQ Y+ C VRHL + + H+ L +++ E
Sbjct: 150 DEQLSLCLERLSSGKDKNKNVLQNKYVRCSVRAEVRHLRRVLCHRLMLNPQHVQLLFDNE 209
Query: 417 L 417
+
Sbjct: 210 V 210
>UNIPROTKB|Q6DLV9 [details] [associations]
symbol:Pcgf1 "Polycomb group RING finger protein 1"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 RGD:1549782 Prosite:PS00518
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GO:GO:0035518 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 HOGENOM:HOG000231946 CTD:84759 KO:K11487
OrthoDB:EOG4894N6 EMBL:AY662670 IPI:IPI00464918
RefSeq:NP_001007001.1 UniGene:Rn.203514 ProteinModelPortal:Q6DLV9
SMR:Q6DLV9 PhosphoSite:Q6DLV9 PRIDE:Q6DLV9 GeneID:312480
KEGG:rno:312480 UCSC:RGD:1549782 InParanoid:Q6DLV9 NextBio:664916
Genevestigator:Q6DLV9 Uniprot:Q6DLV9
Length = 243
Score = 120 (47.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 19 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPMC 73
Score = 63 (27.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 358 DDQLDMHLVLVSLDEQRIPG-LQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKE 416
D+QL + L +S + + LQ Y+ C VRHL + + H+ L +++ E
Sbjct: 150 DEQLSLCLERLSSGKDKNKNVLQNKYVRCSVRAEVRHLRRVLCHRLMLNPQHVQLLFDNE 209
Query: 417 L 417
+
Sbjct: 210 V 210
>UNIPROTKB|F1SNT4 [details] [associations]
symbol:F1SNT4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:CU468647
Ensembl:ENSSSCT00000009065 OMA:DVNPHIV Uniprot:F1SNT4
Length = 259
Score = 121 (47.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 80 GEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
G ++E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 29 GTREE-VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPMC 85
Score = 63 (27.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 358 DDQLDMHLVLVSLDEQRIPG-LQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKE 416
D+QL + L +S + + LQ Y+ C VRHL + + H+ L +++ E
Sbjct: 166 DEQLSLCLERLSSGKDKNKSVLQNKYVRCSVRAEVRHLRKVLCHRLMLSPQHVQLLFDNE 225
Query: 417 L 417
+
Sbjct: 226 V 226
>UNIPROTKB|Q9BSM1 [details] [associations]
symbol:PCGF1 "Polycomb group RING finger protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0031519 "PcG protein complex"
evidence=IDA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035518 GO:GO:0031519
HSSP:P25916 HOVERGEN:HBG052826 EMBL:AC005041 eggNOG:NOG277991
HOGENOM:HOG000231946 CTD:84759 KO:K11487 OrthoDB:EOG4894N6
EMBL:AF087884 EMBL:BC004952 IPI:IPI00902987 IPI:IPI00921560
RefSeq:NP_116062.2 UniGene:Hs.316750 ProteinModelPortal:Q9BSM1
SMR:Q9BSM1 IntAct:Q9BSM1 MINT:MINT-1460887 STRING:Q9BSM1
PhosphoSite:Q9BSM1 DMDM:223590124 PRIDE:Q9BSM1 DNASU:84759
Ensembl:ENST00000233630 GeneID:84759 KEGG:hsa:84759 UCSC:uc002sly.3
GeneCards:GC02M074732 HGNC:HGNC:17615 HPA:HPA011356 MIM:610231
neXtProt:NX_Q9BSM1 PharmGKB:PA134976631 InParanoid:Q9BSM1
OMA:NEHIVCY ChiTaRS:PCGF1 GenomeRNAi:84759 NextBio:74901
Bgee:Q9BSM1 CleanEx:HS_PCGF1 Genevestigator:Q9BSM1 Uniprot:Q9BSM1
Length = 259
Score = 120 (47.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 31 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPMC 85
Score = 64 (27.6 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 358 DDQLDMHLVLVSLDEQRIPG-LQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKE 416
D+QL++ L +S + + LQ Y+ C VRHL + + H+ L +++ E
Sbjct: 166 DEQLNLCLERLSSGKDKNKSVLQNKYVRCSVRAEVRHLRRVLCHRLMLNPQHVQLLFDNE 225
Query: 417 L 417
+
Sbjct: 226 V 226
>UNIPROTKB|F1MM90 [details] [associations]
symbol:PCGF1 "Polycomb group RING finger protein 1"
species:9913 "Bos taurus" [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GO:GO:0035518 GO:GO:0031519 GeneTree:ENSGT00550000074463
IPI:IPI00687683 OMA:NEHIVCY EMBL:DAAA02030322
Ensembl:ENSBTAT00000022090 Uniprot:F1MM90
Length = 259
Score = 120 (47.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 31 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPMC 85
Score = 63 (27.2 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 358 DDQLDMHLVLVSLDEQRIPG-LQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKE 416
D+QL + L +S + + LQ Y+ C VRHL + + H+ L +++ E
Sbjct: 166 DEQLSLCLERLSSGKDKNKSILQNKYVRCSVRAEVRHLRRVLCHRLMLNPQHVQLLFDNE 225
Query: 417 L 417
+
Sbjct: 226 V 226
>UNIPROTKB|Q2YDF9 [details] [associations]
symbol:PCGF1 "Polycomb group RING finger protein 1"
species:9913 "Bos taurus" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
HOVERGEN:HBG052826 eggNOG:NOG277991 HOGENOM:HOG000231946
EMBL:BC110242 IPI:IPI00687683 RefSeq:NP_001039912.2
UniGene:Bt.52040 ProteinModelPortal:Q2YDF9 GeneID:539040
KEGG:bta:539040 CTD:84759 InParanoid:Q2YDF9 KO:K11487
OrthoDB:EOG4894N6 NextBio:20877740 Uniprot:Q2YDF9
Length = 259
Score = 120 (47.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 31 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPMC 85
Score = 63 (27.2 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 358 DDQLDMHLVLVSLDEQRIPG-LQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKE 416
D+QL + L +S + + LQ Y+ C VRHL + + H+ L +++ E
Sbjct: 166 DEQLSLCLERLSSGKDKNKSILQNKYVRCSVRAEVRHLRRVLCHRLMLNPQHVQLLFDNE 225
Query: 417 L 417
+
Sbjct: 226 V 226
>UNIPROTKB|E2R984 [details] [associations]
symbol:PCGF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035518 GO:GO:0031519
GeneTree:ENSGT00550000074463 CTD:84759 KO:K11487 OMA:NEHIVCY
EMBL:AAEX03010965 RefSeq:XP_532995.2 ProteinModelPortal:E2R984
Ensembl:ENSCAFT00000013424 GeneID:475785 KEGG:cfa:475785
Uniprot:E2R984
Length = 259
Score = 120 (47.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 31 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPMC 85
Score = 63 (27.2 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 358 DDQLDMHLVLVSLDEQRIPG-LQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKE 416
D+QL + L +S + + LQ Y+ C VRHL + + H+ L +++ E
Sbjct: 166 DEQLSLCLERLSSGKDKNKSILQNKYVRCSVRAEVRHLRRVLCHRLMLNPQHVQLLFDNE 225
Query: 417 L 417
+
Sbjct: 226 V 226
>MGI|MGI:1917087 [details] [associations]
symbol:Pcgf1 "polycomb group ring finger 1" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
MGI:MGI:1917087 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035518 GO:GO:0031519
HSSP:P25916 GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826
EMBL:AC104324 eggNOG:NOG277991 HOGENOM:HOG000231946 CTD:84759
KO:K11487 OrthoDB:EOG4894N6 OMA:NEHIVCY EMBL:BC028560
IPI:IPI00153112 RefSeq:NP_932109.1 UniGene:Mm.12261
ProteinModelPortal:Q8R023 SMR:Q8R023 IntAct:Q8R023 STRING:Q8R023
PhosphoSite:Q8R023 PRIDE:Q8R023 Ensembl:ENSMUST00000092614
Ensembl:ENSMUST00000165164 GeneID:69837 KEGG:mmu:69837
UCSC:uc009cmg.1 InParanoid:Q8R023 NextBio:330455 Bgee:Q8R023
CleanEx:MM_PCGF1 Genevestigator:Q8R023 Uniprot:Q8R023
Length = 259
Score = 120 (47.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 31 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPMC 85
Score = 63 (27.2 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 358 DDQLDMHLVLVSLDEQRIPG-LQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKE 416
D+QL + L +S + + LQ Y+ C VRHL + + H+ L +++ E
Sbjct: 166 DEQLSLCLERLSSGKDKNKNVLQNKYVRCSVRAEVRHLRRVLCHRLMLNPQHVQLLFDNE 225
Query: 417 L 417
+
Sbjct: 226 V 226
>UNIPROTKB|I3LDC6 [details] [associations]
symbol:LOC100524364 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00690000101886 EMBL:FP236415
Ensembl:ENSSSCT00000025760 Uniprot:I3LDC6
Length = 140
Score = 105 (42.0 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN-ECPACRT 140
++CP+CL + T V+ C H FCR C+ + + CP CRT
Sbjct: 10 LECPVCLEKLDVTAKVLPCQHTFCRPCLQRIFKAHKELRCPECRT 54
Score = 40 (19.1 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 300 ESMGASVGLIGPSERLAWGKG-GIR-SHTRHGSVSGSNGKNARNN 342
E++ A++ L+ + + G+G G R S R G ++ +GK +R +
Sbjct: 61 EALPANLLLVRLLDGVRSGQGSGTRGSFRRPGVLTSQDGKKSRTH 105
>UNIPROTKB|B3KRH1 [details] [associations]
symbol:RNF2 "Ring finger protein 2, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 EMBL:CH471067 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL109865 HOGENOM:HOG000273917
HOVERGEN:HBG079942 UniGene:Hs.591490 HGNC:HGNC:10061 EMBL:AK091574
IPI:IPI00514074 SMR:B3KRH1 STRING:B3KRH1 Ensembl:ENST00000367509
UCSC:uc001grd.1 Uniprot:B3KRH1
Length = 264
Score = 130 (50.8 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLG 131
++V + E+ CPICL +++ T T ECLHRFC +CI A+R G
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSG 83
Score = 47 (21.6 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 27/116 (23%), Positives = 49/116 (42%)
Query: 332 SGSNGKNARNNRLSKLVD-YLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLS 390
S +G NN + +D + E + H L+ D+ Q Y+ +
Sbjct: 128 SDDSGLELDNNNAAMAIDPVMDGASEIELVFRPHPTLMEKDDSA----QTRYIKTSGNAT 183
Query: 391 VRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSN---SLMIDPCKDKLQVLN 443
V HL +Y+A + AL+ E+ K +++NL ++S ++ I + VLN
Sbjct: 184 VDHLSKYLAVRLALE--ELRS---KGESNQMNLDTASEKQYTIYIATASGQFTVLN 234
>UNIPROTKB|Q4QR06 [details] [associations]
symbol:pcgf1 "Polycomb group RING finger protein 1"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
HOVERGEN:HBG052826 CTD:84759 KO:K11487 EMBL:BC097736
RefSeq:NP_001089498.2 UniGene:Xl.19589 ProteinModelPortal:Q4QR06
GeneID:734550 KEGG:xla:734550 Xenbase:XB-GENE-6255892
Uniprot:Q4QR06
Length = 259
Score = 118 (46.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ ++ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 29 EEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQT-SKYCPLC 83
Score = 57 (25.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 9/36 (25%), Positives = 22/36 (61%)
Query: 378 LQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYL 413
LQQ Y+ C +RHL + ++H+ + +++++ +
Sbjct: 187 LQQKYVRCSVRSEIRHLRRVLSHRLSAPLAQVQLLI 222
>UNIPROTKB|Q5T8Z4 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=IEA] [GO:0033092 "positive regulation of
immature T cell proliferation in thymus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0043066 GO:GO:0007420 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0001701 GO:GO:0016573 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0006959 GO:GO:0048704 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0031519 HOGENOM:HOG000231945
HOVERGEN:HBG052826 GO:GO:0016574 GO:GO:0033092 GO:GO:0021903
GO:GO:0048103 EMBL:AL158211 UniGene:Hs.380403 UniGene:Hs.731287
HGNC:HGNC:1066 IPI:IPI00646013 SMR:Q5T8Z4 Ensembl:ENST00000442508
Uniprot:Q5T8Z4
Length = 150
Score = 114 (45.2 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDK 167
L R D ++ L P + K
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFK 88
>UNIPROTKB|Q5T8Z6 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=IEA] [GO:0033092 "positive regulation of
immature T cell proliferation in thymus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0043066 GO:GO:0007420 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0001701 GO:GO:0016573 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0006959 GO:GO:0048704 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0031519 GO:GO:0016574
GO:GO:0033092 GO:GO:0021903 GO:GO:0048103 EMBL:AL158211
UniGene:Hs.380403 UniGene:Hs.731287 HGNC:HGNC:1066
HOGENOM:HOG000231946 IPI:IPI00640733 SMR:Q5T8Z6 MINT:MINT-1403210
Ensembl:ENST00000416820 HOVERGEN:HBG071649 Uniprot:Q5T8Z6
Length = 105
Score = 114 (45.2 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDK 167
L R D ++ L P + K
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFK 88
>ZFIN|ZDB-GENE-030616-605 [details] [associations]
symbol:pcgf1 "polycomb group ring finger 1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-030616-605 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AL831789 IPI:IPI00482456
Ensembl:ENSDART00000129432 Bgee:F1R1I1 Uniprot:F1R1I1
Length = 295
Score = 119 (46.9 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V +K+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 63 EEEVKIKIKDLNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQT-SKYCPMC 117
Score = 54 (24.1 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 371 DEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKE 416
D+ ++ LQQ ++ C VRHL + + H+ ++ ++++ E
Sbjct: 216 DKNKLT-LQQKFVRCSVRAEVRHLRKVLCHRLNVEKHQVQMLFNNE 260
>UNIPROTKB|Q28H21 [details] [associations]
symbol:pcgf1 "Polycomb group RING finger protein 1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0031519 "PcG
protein complex" evidence=ISS] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
CTD:84759 KO:K11487 EMBL:CR761098 RefSeq:NP_001016417.2
UniGene:Str.20413 ProteinModelPortal:Q28H21 SMR:Q28H21
GeneID:549171 KEGG:xtr:549171 Xenbase:XB-GENE-6454077
Uniprot:Q28H21
Length = 259
Score = 118 (46.6 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ ++ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 29 EEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQT-SKYCPLC 83
Score = 52 (23.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 8/36 (22%), Positives = 21/36 (58%)
Query: 378 LQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYL 413
L+Q Y+ C +RHL + ++H+ + + +++ +
Sbjct: 187 LEQKYVRCSVRSEIRHLRRVLSHRLSAPLAHVQLLI 222
>UNIPROTKB|Q9BYE7 [details] [associations]
symbol:PCGF6 "Polycomb group RING finger protein 6"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=IDA;TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0035102 "PRC1 complex" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
EMBL:AB047006 Pfam:PF00097 Prosite:PS00518 GO:GO:0045892
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL591408
InterPro:IPR017907 HOVERGEN:HBG052826 GO:GO:0035102
HOGENOM:HOG000231946 EMBL:AK027885 EMBL:AK290679 EMBL:BC007602
EMBL:BC010235 IPI:IPI00030334 IPI:IPI00063571 RefSeq:NP_001011663.1
RefSeq:NP_115530.2 UniGene:Hs.741474 PDB:2DJB PDBsum:2DJB
ProteinModelPortal:Q9BYE7 SMR:Q9BYE7 DIP:DIP-50946N IntAct:Q9BYE7
STRING:Q9BYE7 PhosphoSite:Q9BYE7 DMDM:116242703 PRIDE:Q9BYE7
DNASU:84108 Ensembl:ENST00000337211 Ensembl:ENST00000369847
GeneID:84108 KEGG:hsa:84108 UCSC:uc001kwt.3 UCSC:uc001kwu.3
CTD:84108 GeneCards:GC10M105053 H-InvDB:HIX0014963 HGNC:HGNC:21156
MIM:607816 neXtProt:NX_Q9BYE7 PharmGKB:PA134887110 eggNOG:NOG286828
InParanoid:Q9BYE7 KO:K11470 OMA:IGANEDT OrthoDB:EOG41ZFBD
PhylomeDB:Q9BYE7 EvolutionaryTrace:Q9BYE7 GenomeRNAi:84108
NextBio:73375 Bgee:Q9BYE7 CleanEx:HS_PCGF6 Genevestigator:Q9BYE7
GermOnline:ENSG00000156374 Uniprot:Q9BYE7
Length = 350
Score = 133 (51.9 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 27/95 (28%), Positives = 43/95 (45%)
Query: 44 DHSNNLEEQQPPQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICL 103
D LEE++ ++ D+ D E +E ++ LS++ + C IC
Sbjct: 79 DEDEELEEEEELEEEEEEEEEDMSHFSLRLEGGRQDSEDEEERLINLSELTPYILCSICK 138
Query: 104 GIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
G + T+ ECLH FC+ CI + +N CP C
Sbjct: 139 GYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 172
>UNIPROTKB|Q5T8Z5 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL158211 UniGene:Hs.380403
UniGene:Hs.731287 HGNC:HGNC:1066 IPI:IPI00643353 SMR:Q5T8Z5
Ensembl:ENST00000456675 Uniprot:Q5T8Z5
Length = 92
Score = 112 (44.5 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 22/81 (27%), Positives = 38/81 (46%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDI 165
L R D ++ L P +
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGL 86
>UNIPROTKB|J3KT13 [details] [associations]
symbol:PCGF2 "Polycomb group ring finger 2, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
EMBL:CH471152 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC006449 InterPro:IPR017907 UniGene:Hs.713595
UniGene:Hs.371617 HGNC:HGNC:12929 ProteinModelPortal:J3KT13
Ensembl:ENST00000579882 Ensembl:ENST00000585100 Uniprot:J3KT13
Length = 257
Score = 123 (48.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 24/83 (28%), Positives = 40/83 (48%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDK 167
S+R D ++ L P + K
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFK 88
Score = 44 (20.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 207 PKSTSALRRSHGRYRDTPLRGRRNYR 232
P S A SHG + PLRG ++ R
Sbjct: 231 PASLQAAHPSHGAH---PLRGHQHQR 253
>UNIPROTKB|D4A0Y0 [details] [associations]
symbol:D4A0Y0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:AC113720
IPI:IPI00359118 Ensembl:ENSRNOT00000030827 Uniprot:D4A0Y0
Length = 151
Score = 111 (44.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECID---KAMRL--GNNECPACRTHCAS 144
L I++EV CPICL ++++ + +C H FCR CI ++ R G CP CR C
Sbjct: 6 LEMIKEEVTCPICLELLKEPVST-DCNHSFCRACITINYESNRNTEGEGSCPVCRV-CYL 63
Query: 145 RRSLRDDLNYDALIAAL 161
R+LR + + ++ L
Sbjct: 64 FRNLRPNRHVANIVERL 80
>TAIR|locus:2133109 [details] [associations]
symbol:BRCA1 "breast cancer susceptibility1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA;IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010332 "response
to gamma radiation" evidence=IEP;RCA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0006310 "DNA
recombination" evidence=IMP] [GO:0006302 "double-strand break
repair" evidence=RCA] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 GO:GO:0010332
GO:GO:0006310 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
KO:K10683 HSSP:P28990 EMBL:AY081328 EMBL:AF515728 EMBL:BT010547
IPI:IPI00526043 RefSeq:NP_193839.4 UniGene:At.32665
ProteinModelPortal:Q8RXD4 SMR:Q8RXD4 MINT:MINT-3289893
STRING:Q8RXD4 PaxDb:Q8RXD4 PRIDE:Q8RXD4 EnsemblPlants:AT4G21070.1
GeneID:827854 KEGG:ath:AT4G21070 TAIR:At4g21070 eggNOG:NOG274496
HOGENOM:HOG000084100 InParanoid:Q8RXD4 OMA:EWAPNVY PhylomeDB:Q8RXD4
ProtClustDB:CLSN2681611 Genevestigator:Q8RXD4 PANTHER:PTHR13763
Uniprot:Q8RXD4
Length = 941
Score = 115 (45.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 24/77 (31%), Positives = 45/77 (58%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLR 149
L + +E++CPICL + + + C H FC CI K+M++ + CP C+ RR +R
Sbjct: 7 LERMGRELKCPICLSLYNSAVS-LSCNHVFCNACIVKSMKM-DATCPVCKIPY-HRREIR 63
Query: 150 DDLNYDALIAALYPDID 166
+ D+L++ +Y +++
Sbjct: 64 GAPHMDSLVS-IYKNME 79
Score = 67 (28.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 37/179 (20%), Positives = 69/179 (38%)
Query: 182 RNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRM-TELQGSD 240
R+K + EA G++ T + S+++ S P+ G + TE+ G
Sbjct: 375 RSKAQSTRVQSDLNVSNEADGKQGTKRKRSSIKSSPAH----PIAGPNELSLGTEIVGKG 430
Query: 241 ENDDANGDAGKDSSSADERSTEVRPKRRKRWYGARFXXXXXXXXXXXXXXDENDSEVHRE 300
+ D A+G + + ++RS +P +KR R + SE +
Sbjct: 431 DQDQAHGPS---DTHPEKRSPTEKPSLKKR---GRKSNASSSLKDLSGKTQKKTSE---K 481
Query: 301 SMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLV--DYLQSLEEK 357
+ +I G G + + G G + +++RNNR S + D+ + EK
Sbjct: 482 KLKLDSHMISSKATQPHGNGILTA----GLNQGGDKQDSRNNRKSTVGKDDHTMQVIEK 536
>UNIPROTKB|E2RE60 [details] [associations]
symbol:PCGF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035102 "PRC1
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0045892 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00550000074463
GO:GO:0035102 CTD:84108 KO:K11470 EMBL:AAEX03015497
EMBL:AAEX03015496 RefSeq:XP_852021.1 ProteinModelPortal:E2RE60
Ensembl:ENSCAFT00000016498 GeneID:609633 KEGG:cfa:609633
NextBio:20895222 Uniprot:E2RE60
Length = 349
Score = 128 (50.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 26/95 (27%), Positives = 43/95 (45%)
Query: 44 DHSNNLEEQQPPQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICL 103
D + LEE + ++ ++ D E +E ++ LS++ + C IC
Sbjct: 78 DEDDELEEDEELEEEEEEEEEEMSHFSLRLEGGRPDSEDEEERLINLSELTPYILCSICK 137
Query: 104 GIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
G + T+ ECLH FC+ CI + +N CP C
Sbjct: 138 GYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 171
>UNIPROTKB|D6RAS2 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HGNC:HGNC:21162
EMBL:AC106872 IPI:IPI00967237 ProteinModelPortal:D6RAS2 SMR:D6RAS2
Ensembl:ENST00000507119 ArrayExpress:D6RAS2 Bgee:D6RAS2
Uniprot:D6RAS2
Length = 90
Score = 107 (42.7 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMR-LGNN-ECPACRTH 141
EFV L ++++E CPICL ++ T+ C H FCR C+ + + L + CP CR
Sbjct: 2 EFVTA-LVNLQEESSCPICLEYLKDPVTI-NCGHNFCRSCLSVSWKDLDDTFPCPVCR-F 58
Query: 142 CASRRSLR 149
C +S R
Sbjct: 59 CFPYKSFR 66
>UNIPROTKB|J9P0C4 [details] [associations]
symbol:PCGF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AAEX03015497 EMBL:AAEX03015496
Ensembl:ENSCAFT00000044220 OMA:WAGRSHY Uniprot:J9P0C4
Length = 383
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 26/95 (27%), Positives = 43/95 (45%)
Query: 44 DHSNNLEEQQPPQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICL 103
D + LEE + ++ ++ D E +E ++ LS++ + C IC
Sbjct: 78 DEDDELEEDEELEEEEEEEEEEMSHFSLRLEGGRPDSEDEEERLINLSELTPYILCSICK 137
Query: 104 GIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
G + T+ ECLH FC+ CI + +N CP C
Sbjct: 138 GYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 171
>UNIPROTKB|E1BJL2 [details] [associations]
symbol:PCGF6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 CTD:84108 KO:K11470 OMA:IGANEDT
EMBL:DAAA02059034 EMBL:DAAA02059035 IPI:IPI00710365
RefSeq:NP_001192549.1 UniGene:Bt.42279 ProteinModelPortal:E1BJL2
Ensembl:ENSBTAT00000013026 GeneID:507739 KEGG:bta:507739
NextBio:20868204 Uniprot:E1BJL2
Length = 351
Score = 127 (49.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 44 DHSNNLEEQQPPQDSTPAAAADVDGNESDRSRSSG-DGEKDEFVIVKLSDIRKEVQCPIC 102
D LEE + ++ + + S R D E +E ++ LS++ + C IC
Sbjct: 79 DEDEELEEDEDLEEEEEEEEEEEMSHFSLRLEGGRPDSEDEEERLINLSELTPYILCSIC 138
Query: 103 LGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
G + T+ ECLH FC+ CI + +N CP C
Sbjct: 139 KGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 173
>UNIPROTKB|F1N8I5 [details] [associations]
symbol:BRCA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006281 "DNA repair" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR011364 PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089
SMART:SM00184 InterPro:IPR001357 Pfam:PF00097 Pfam:PF00533
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 PANTHER:PTHR13763
InterPro:IPR025994 Pfam:PF12820 GeneTree:ENSGT00440000034289
GO:GO:0009048 GO:GO:0007098 EMBL:AADN02068671 IPI:IPI00587753
Ensembl:ENSGALT00000004392 Ensembl:ENSGALT00000039722 OMA:INASHEN
Uniprot:F1N8I5
Length = 1749
Score = 130 (50.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 27/82 (32%), Positives = 49/82 (59%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM---RLGNNECPACRTHCASRR 146
LS ++K ++CP+CL +I++ + +C H FCR C+ K + + G +CP C+T ++R
Sbjct: 15 LSAMQKNLECPVCLDVIKEPVST-KCDHVFCRFCMFKLLSRKKKGVIQCPLCKTE-VTKR 72
Query: 147 SLRDDLNYDALIAALYPDIDKY 168
SL+++ + LI L I +
Sbjct: 73 SLKENSRFKQLIEGLLEAISAF 94
Score = 54 (24.1 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 36/169 (21%), Positives = 61/169 (36%)
Query: 293 NDSEVHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQ 352
ND +MGA++G + G + + KNA N L KL +
Sbjct: 1344 NDEYQEDPNMGANLGEASGYDSETSRVEDSHEPFSQGEILSTQQKNAMQNNLKKLQQEMA 1403
Query: 353 SLEEKDDQLDMHLVLVSLDEQRIPGLQQ-PYLCCRPTLSVRHLCQYVA----HQTALQAS 407
LE L H S D + +P ++ PY TL + + Q H + + +
Sbjct: 1404 VLEAV---LKQH---GSQDAEVLPLCRELPYCSIGGTLGLERMRQETENVSEHDSETKLT 1457
Query: 408 EIEIYLVKELHSKINLPSSSNSLMIDPCKDKLQVLNEQETLTGLQTQNL 456
+ + V + N P+SS+ + PC + + G N+
Sbjct: 1458 KASVLPVLCGNVTKN-PNSSSFSVKHPCPQTAEATDSSAVAQGDNKSNV 1505
Score = 45 (20.9 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 411 IYLVKELHSKINLPSSSNSLMIDPCKDKLQVLNEQETL 448
+ + K++ S + SS+N + PC + L NEQ+TL
Sbjct: 1239 LQIQKQVTSVVQ--SSANPSTL-PCSECLNENNEQKTL 1273
>RGD|1562871 [details] [associations]
symbol:RGD1562871 "similar to BMI1-like protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 RGD:1562871 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 EMBL:CH473969
IPI:IPI00361980 RefSeq:NP_001100405.1 UniGene:Rn.218687
Ensembl:ENSRNOT00000050807 GeneID:302366 KEGG:rno:302366
UCSC:RGD:1562871 CTD:302366 OrthoDB:EOG4XSKRX NextBio:649488
Uniprot:D4AE11
Length = 232
Score = 122 (48.0 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 30/109 (27%), Positives = 48/109 (44%)
Query: 62 AAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCR 121
A+ +G E + E ++ LS++ + C IC G + T+ ECLH FC+
Sbjct: 86 ASEPPEGGEGKAEEKAAVESDQEERLLPLSEMIPYISCSICKGYLIDAATITECLHTFCK 145
Query: 122 ECIDKAMRLGNNECPACR--THCAS-RRSLRDDLNYDALIAALYPDIDK 167
CI K +N CP C H A +LR D ++ L +++
Sbjct: 146 SCIVKHFE-HSNRCPKCNIIVHEAKPHNNLRMDPQLQNIVYKLVSGLEE 193
>GENEDB_PFALCIPARUM|PF11_0244 [details] [associations]
symbol:PF11_0244 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AE014186 RefSeq:XP_001347915.1
ProteinModelPortal:Q8IID0 IntAct:Q8IID0 MINT:MINT-1640413
PRIDE:Q8IID0 EnsemblProtists:PF11_0244:mRNA GeneID:810791
KEGG:pfa:PF11_0244 EuPathDB:PlasmoDB:PF3D7_1123300
ProtClustDB:CLSZ2432487 Uniprot:Q8IID0
Length = 689
Score = 121 (47.7 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDL 152
I EV+C IC+ ++ T+ C H FCR+CI+KA N CP CR++ ++++ +L
Sbjct: 219 IPSEVECAICMKLLIVPVTI-PCGHNFCRDCIEKAKEY-KNLCPLCRSNMGDKKNI--NL 274
Query: 153 NYDALIAALYP 163
LI YP
Sbjct: 275 LLGELIKQKYP 285
Score = 54 (24.1 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 44 DHSNNLEEQQPPQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEV 97
++S+N D ++ + D N +D + SS + D+F + I KE+
Sbjct: 146 NNSSNNNNDDNNNDDNNSSNNNNDDNNNDDNNSSNNNNDDDFYTCTNTSIDKEI 199
Score = 39 (18.8 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 324 SHTRHGSVSGSNGKNARNNRLSKLVDY 350
++ + S + SN N NN ++ +V Y
Sbjct: 529 NNNNNNSNNNSNNNN-NNNNITNIVKY 554
Score = 37 (18.1 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 351 LQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCC 385
+ S +EK+D+ ++ + V + EQ+ Q YL C
Sbjct: 362 ITSSKEKNDEKKLYGIHVKILEQKKSN-QVFYLKC 395
>UNIPROTKB|Q8IID0 [details] [associations]
symbol:PF11_0244 "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AE014186 RefSeq:XP_001347915.1
ProteinModelPortal:Q8IID0 IntAct:Q8IID0 MINT:MINT-1640413
PRIDE:Q8IID0 EnsemblProtists:PF11_0244:mRNA GeneID:810791
KEGG:pfa:PF11_0244 EuPathDB:PlasmoDB:PF3D7_1123300
ProtClustDB:CLSZ2432487 Uniprot:Q8IID0
Length = 689
Score = 121 (47.7 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDL 152
I EV+C IC+ ++ T+ C H FCR+CI+KA N CP CR++ ++++ +L
Sbjct: 219 IPSEVECAICMKLLIVPVTI-PCGHNFCRDCIEKAKEY-KNLCPLCRSNMGDKKNI--NL 274
Query: 153 NYDALIAALYP 163
LI YP
Sbjct: 275 LLGELIKQKYP 285
Score = 54 (24.1 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 44 DHSNNLEEQQPPQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEV 97
++S+N D ++ + D N +D + SS + D+F + I KE+
Sbjct: 146 NNSSNNNNDDNNNDDNNSSNNNNDDNNNDDNNSSNNNNDDDFYTCTNTSIDKEI 199
Score = 39 (18.8 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 324 SHTRHGSVSGSNGKNARNNRLSKLVDY 350
++ + S + SN N NN ++ +V Y
Sbjct: 529 NNNNNNSNNNSNNNN-NNNNITNIVKY 554
Score = 37 (18.1 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 351 LQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCC 385
+ S +EK+D+ ++ + V + EQ+ Q YL C
Sbjct: 362 ITSSKEKNDEKKLYGIHVKILEQKKSN-QVFYLKC 395
>MGI|MGI:2685640 [details] [associations]
symbol:Trim75 "tripartite motif-containing 75" species:10090
"Mus musculus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 MGI:MGI:2685640 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HSSP:Q9CQJ4 HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00700000104307 OrthoDB:EOG4NP73C eggNOG:NOG254111
EMBL:AK136018 IPI:IPI00339960 RefSeq:NP_001028601.1
UniGene:Mm.334557 ProteinModelPortal:Q3UWZ0 SMR:Q3UWZ0 PRIDE:Q3UWZ0
Ensembl:ENSMUST00000095295 GeneID:333307 KEGG:mmu:333307 CTD:391714
InParanoid:Q3UWZ0 KO:K12037 OMA:NILVETI NextBio:399957 Bgee:Q3UWZ0
Genevestigator:Q3UWZ0 Uniprot:Q3UWZ0
Length = 467
Score = 126 (49.4 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 28/71 (39%), Positives = 38/71 (53%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDK--AMRLGNNECPACRTHCASRRS 147
L+ ++KE +CPICL + TV EC H FCR CI A + + CP CR C R+
Sbjct: 7 LARLQKETKCPICLDDLTDPVTV-ECGHNFCRSCIKDFWAGQQATSSCPVCRHQC-QHRN 64
Query: 148 LRDDLNYDALI 158
LR + +I
Sbjct: 65 LRSNAQLGNMI 75
>ZFIN|ZDB-GENE-080219-13 [details] [associations]
symbol:trim35-39 "tripartite motif containing 35-39"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-080219-13 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:BX005466 IPI:IPI00932638 Ensembl:ENSDART00000082154
OMA:ICEVISS Bgee:F1QQG3 Uniprot:F1QQG3
Length = 447
Score = 125 (49.1 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLG-NNECPACRTHCASRRSLRDD 151
KE+ CPIC I K+ ++ C H FC+ECI + R + ECP CR RRS +DD
Sbjct: 7 KEISCPICCEIF-KSPILLSCSHSFCKECIQQFWRTKISRECPVCR-----RRSSKDD 58
>UNIPROTKB|E1BMR4 [details] [associations]
symbol:PCGF2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0043066
GO:GO:0009952 GO:GO:0046872 GO:GO:0008270 GO:GO:0001701
GO:GO:0016573 GO:GO:0003682 GO:GO:0016567 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0048704
GO:GO:0016604 InterPro:IPR017907 GeneTree:ENSGT00550000074463
GO:GO:0035102 GO:GO:0001739 CTD:7703 KO:K11460 OMA:DRDEKKG
UniGene:Bt.62403 EMBL:DAAA02049098 IPI:IPI00698887
RefSeq:NP_001137578.1 ProteinModelPortal:E1BMR4
Ensembl:ENSBTAT00000015331 GeneID:505147 KEGG:bta:505147
NextBio:20867002 Uniprot:E1BMR4
Length = 344
Score = 123 (48.4 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 24/83 (28%), Positives = 40/83 (48%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDK 167
S+R D ++ L P + K
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFK 88
>UNIPROTKB|J9NUE7 [details] [associations]
symbol:PCGF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AAEX03006484 EMBL:AAEX03006485
Ensembl:ENSCAFT00000048828 Uniprot:J9NUE7
Length = 344
Score = 123 (48.4 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 24/83 (28%), Positives = 40/83 (48%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDK 167
S+R D ++ L P + K
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFK 88
>UNIPROTKB|E2QY05 [details] [associations]
symbol:PCGF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 OMA:DRDEKKG EMBL:AAEX03006484
EMBL:AAEX03006485 Ensembl:ENSCAFT00000026210 Uniprot:E2QY05
Length = 348
Score = 123 (48.4 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 24/83 (28%), Positives = 40/83 (48%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDK 167
S+R D ++ L P + K
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFK 88
>MGI|MGI:1918291 [details] [associations]
symbol:Pcgf6 "polycomb group ring finger 6" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=ISA] [GO:0031519 "PcG protein complex" evidence=ISO]
[GO:0035102 "PRC1 complex" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1918291
Pfam:PF00097 Prosite:PS00518 GO:GO:0019904 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826
GO:GO:0035102 HOGENOM:HOG000231946 CTD:84108 eggNOG:NOG286828
KO:K11470 OMA:IGANEDT OrthoDB:EOG41ZFBD EMBL:AB047007 EMBL:BC016195
EMBL:BC089460 IPI:IPI00118541 RefSeq:NP_081930.1 UniGene:Mm.35413
ProteinModelPortal:Q99NA9 SMR:Q99NA9 IntAct:Q99NA9 STRING:Q99NA9
PhosphoSite:Q99NA9 PRIDE:Q99NA9 Ensembl:ENSMUST00000026032
GeneID:71041 KEGG:mmu:71041 UCSC:uc008hul.1 InParanoid:Q99NA9
NextBio:332887 Bgee:Q99NA9 CleanEx:MM_PCGF6 Genevestigator:Q99NA9
GermOnline:ENSMUSG00000025050 Uniprot:Q99NA9
Length = 353
Score = 123 (48.4 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 28/96 (29%), Positives = 46/96 (47%)
Query: 44 DHSNNLEEQQPPQDSTPAAAADVDGNESDRSRSS-GDGEKDEFVIVKLSDIRKEVQCPIC 102
D+ LEE++ ++ + + S R S D E +E ++ L ++ + C IC
Sbjct: 83 DYDEELEEEEEMEEEEEEE--EEMSHFSLRLESGRADSEDEEERLINLVELTPYILCSIC 140
Query: 103 LGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
G + T+ ECLH FC+ CI + +N CP C
Sbjct: 141 KGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 175
>UNIPROTKB|C9JWN8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HOGENOM:HOG000234134 HGNC:HGNC:16276 ChiTaRS:TRIM5
EMBL:AC109341 IPI:IPI00749246 ProteinModelPortal:C9JWN8 SMR:C9JWN8
STRING:C9JWN8 Ensembl:ENST00000419850 ArrayExpress:C9JWN8
Bgee:C9JWN8 Uniprot:C9JWN8
Length = 72
Score = 102 (41.0 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECID----KAMR-LGNNECPACR 139
L ++++EV CPICL ++ + + ++C H FC+ C+ K+M G + CP CR
Sbjct: 6 LVNVKEEVTCPICLELLTQPLS-LDCGHSFCQACLTANHKKSMLDKGESSCPVCR 59
>FB|FBgn0002283 [details] [associations]
symbol:l(3)73Ah "lethal (3) 73Ah" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
EMBL:AE014296 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00550000074463
eggNOG:NOG277991 KO:K11488 OMA:THLKKFI EMBL:AY071030 PIR:JC4296
RefSeq:NP_001246797.1 RefSeq:NP_524933.1 UniGene:Dm.1746 SMR:Q9VV77
IntAct:Q9VV77 MINT:MINT-320154 STRING:Q9VV77
EnsemblMetazoa:FBtr0075311 EnsemblMetazoa:FBtr0307336 GeneID:48903
KEGG:dme:Dmel_CG4195 UCSC:CG4195-RA FlyBase:FBgn0002283
InParanoid:Q9VV77 OrthoDB:EOG47PVNS ChiTaRS:l(3)73Ah
GenomeRNAi:48903 NextBio:839572 Uniprot:Q9VV77
Length = 222
Score = 110 (43.8 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 21/51 (41%), Positives = 25/51 (49%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
VKL I + C IC G TV ECLH FC+ C+ K + CP C
Sbjct: 5 VKLKTINPHITCKICGGYFIDATTVTECLHTFCKSCLVKHLE-EKKTCPTC 54
Score = 46 (21.3 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 358 DDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQ--TALQA-SEIEIYLV 414
D+Q+++ L +S LQ+ ++ C ++ HL + VA + ++ EI+I
Sbjct: 131 DEQVNVCLECIS---NNFKNLQRRFIRCSSQATITHLKKLVAKKILNGIEKYREIDILCN 187
Query: 415 KELHSK 420
+EL K
Sbjct: 188 EELLGK 193
Score = 41 (19.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 199 EALGRKRTPKSTSALRRSHGRYRDTPLR 226
E LG+ T K R R+RD PLR
Sbjct: 189 ELLGKDHTLKFVYVTR---WRFRDPPLR 213
>ZFIN|ZDB-GENE-080723-33 [details] [associations]
symbol:pcgf5a "polycomb group ring finger 5a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-080723-33 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
HOVERGEN:HBG052826 eggNOG:NOG277991 EMBL:BC163687 EMBL:BC163702
IPI:IPI00858490 RefSeq:NP_001122184.1 UniGene:Dr.134043
ProteinModelPortal:B3DK16 STRING:B3DK16 Ensembl:ENSDART00000104715
GeneID:562327 KEGG:dre:562327 CTD:562327 HOGENOM:HOG000231946
KO:K11489 OMA:EESNECP OrthoDB:EOG4NKBW6 NextBio:20884351
Bgee:B3DK16 Uniprot:B3DK16
Length = 234
Score = 119 (46.9 bits), Expect = 0.00010, P = 0.00010
Identities = 27/77 (35%), Positives = 38/77 (49%)
Query: 92 DIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC--RTHCASR-RSL 148
D + + C IC G + K V ECLH FC+ CI + +NECP C + H + L
Sbjct: 11 DFNRYITCSICRGYLIKPTAVTECLHTFCKSCIVQHFE-ESNECPECGIQVHETNPLEML 69
Query: 149 RDDLNYDALIAALYPDI 165
R D + +I L P +
Sbjct: 70 RLDKTLEEIIFKLVPGL 86
>UNIPROTKB|F1NDM6 [details] [associations]
symbol:PCGF6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0035102
"PRC1 complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0045892 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 GO:GO:0035102
OMA:IGANEDT EMBL:AADN02030828 EMBL:AADN02030829 IPI:IPI00811000
Ensembl:ENSGALT00000013395 Uniprot:F1NDM6
Length = 293
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 31/95 (32%), Positives = 45/95 (47%)
Query: 44 DHSNNLEEQQPPQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICL 103
D +EE++ DS D DG E D S D E+ ++ L+++ + C IC
Sbjct: 31 DEEEEMEEEELEGDSGVRFGTD-DG-ELD---SDDDRER----MINLAELTPYILCSICK 81
Query: 104 GIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
G T+ ECLH FC+ CI + +N CP C
Sbjct: 82 GYFIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 115
>UNIPROTKB|C9IZ30 [details] [associations]
symbol:RNF182 "E3 ubiquitin-protein ligase RNF182"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL138718 HGNC:HGNC:28522
IPI:IPI00945038 ProteinModelPortal:C9IZ30 SMR:C9IZ30 STRING:C9IZ30
Ensembl:ENST00000423553 ArrayExpress:C9IZ30 Bgee:C9IZ30
Uniprot:C9IZ30
Length = 82
Score = 83 (34.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 91 SDIRKEVQCPICLG---IIRKTRTVMECLHRFCRECIDKAMRLGNNE-----CPACR 139
S E++C IC + ++ V+EC HR C +C+ K + G++ CP CR
Sbjct: 12 SQASDELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCR 68
Score = 38 (18.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 53 QPPQDSTPAAAAD 65
QPP+D+ + A+D
Sbjct: 4 QPPEDTAESQASD 16
>UNIPROTKB|J9P2L6 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AAEX03015404 EMBL:AAEX03015405
EMBL:AAEX03015406 Ensembl:ENSCAFT00000045871 Uniprot:J9P2L6
Length = 229
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC--RTHCASR-R 146
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C + H +
Sbjct: 9 VKDFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGIQVHETNPLE 67
Query: 147 SLRDDLNYDALIAALYPDI 165
LR D + +I L P +
Sbjct: 68 MLRLDNTLEEIIFKLVPGL 86
>TAIR|locus:2033103 [details] [associations]
symbol:DRIP1 "DREB2A-interacting protein 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0051865
"protein autoubiquitination" evidence=IDA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0009414
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 EMBL:AC011001 EMBL:BX815334
EMBL:BT033132 IPI:IPI00534763 IPI:IPI00536628 PIR:E86202
RefSeq:NP_172162.3 RefSeq:NP_973775.1 UniGene:At.28756
ProteinModelPortal:Q9M9Y4 SMR:Q9M9Y4 IntAct:Q9M9Y4 PaxDb:Q9M9Y4
PRIDE:Q9M9Y4 EnsemblPlants:AT1G06770.1 GeneID:837188
KEGG:ath:AT1G06770 TAIR:At1g06770 eggNOG:NOG277991
HOGENOM:HOG000240404 InParanoid:Q3EDH5 KO:K16277 OMA:LNKFTQN
PhylomeDB:Q9M9Y4 ProtClustDB:CLSN2688579 Genevestigator:Q9M9Y4
Uniprot:Q9M9Y4
Length = 421
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 29/78 (37%), Positives = 38/78 (48%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE-CPACRTHCASR- 145
VK +R + C IC I+R T+ ECLH FCR+CI + + E CP C S
Sbjct: 5 VKKETMRACLSCSICDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLGSTP 64
Query: 146 -RSLRDDLNYDALIAALY 162
LR D N L A ++
Sbjct: 65 LEKLRPDHNLQDLRAKIF 82
>TAIR|locus:2055435 [details] [associations]
symbol:AT2G34000 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC002341
EMBL:DQ059092 EMBL:BT029341 IPI:IPI00544559 PIR:B84751
RefSeq:NP_180947.1 UniGene:At.53025 ProteinModelPortal:O22953
SMR:O22953 PRIDE:O22953 EnsemblPlants:AT2G34000.1 GeneID:817961
KEGG:ath:AT2G34000 TAIR:At2g34000 eggNOG:NOG251402
HOGENOM:HOG000114083 InParanoid:O22953 OMA:WLESHAT PhylomeDB:O22953
ProtClustDB:CLSN2913116 Genevestigator:O22953 Uniprot:O22953
Length = 151
Score = 107 (42.7 bits), Expect = 0.00014, P = 0.00014
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 95 KEVQCPICLGIIRKT---RTVMECLHRFCRECIDKAMRLGNNECPACR 139
+E++CP+CLG+I K + + C+H F ECI K + + CP CR
Sbjct: 87 QEIECPVCLGLIPKNVVIKVLPNCMHMFDEECIGKWLE-SHATCPVCR 133
>UNIPROTKB|I3LU11 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
Prosite:PS00518 GO:GO:0035556 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 OMA:YMKKLHM
GeneTree:ENSGT00530000063661 EMBL:FP015900
Ensembl:ENSSSCT00000024857 Uniprot:I3LU11
Length = 1643
Score = 113 (44.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 33/102 (32%), Positives = 50/102 (49%)
Query: 44 DHSNNLEEQQP--PQDSTPAAAADVDGNESDRSRSSGDGE-KDEFVIVKLSDIRKEVQCP 100
+HS+ E+ P+DS+ + ++ DG++ D ++ D + K E SD E CP
Sbjct: 49 EHSDESEDDDEGDPEDSSGSEDSEDDGDDMDTLVAAADAQGKPEAGGAFSSDDDAE-SCP 107
Query: 101 ICLGIIRKTR--TVMECLHRFCRECIDKAMRLGNNECPACRT 140
ICL R T C H FC +CI + + N+ CP RT
Sbjct: 108 ICLNAFRDQAVGTPENCAHYFCLDCILEWSKNANS-CPVDRT 148
Score = 66 (28.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/134 (23%), Positives = 44/134 (32%)
Query: 215 RSHGRYRDTPL-RGRRNYRMTELQGSDENDDANGDAGKDSSSADERSTEVRPKRRKRWYG 273
RS R R T RGR+ + + + +G + S S D S V P G
Sbjct: 973 RSPTRSRSTSSSRGRKKAQRQQASSREHKRARSGSGSRSSRSGDRSSRSVSPA------G 1026
Query: 274 ARFXXXXXXXXXXXXXXDENDSEVHRESMGASVGLIGPSERL-AWGKGGIRSHTRHGSVS 332
A + S H + R +WG+G RS +R S
Sbjct: 1027 AEDQAKRHRPKARSRRSSSDRSSSHERAKRKKAKAKSRERRRGSWGRGRRRSRSRSCS-P 1085
Query: 333 GSNGKNARNNRLSK 346
GS+ R R K
Sbjct: 1086 GSSSHEHREGRRRK 1099
>MGI|MGI:99161 [details] [associations]
symbol:Pcgf2 "polycomb group ring finger 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO;IGI] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IGI] [GO:0001739 "sex chromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0016573 "histone acetylation" evidence=IGI] [GO:0016604
"nuclear body" evidence=IDA] [GO:0031519 "PcG protein complex"
evidence=ISO;IDA] [GO:0035102 "PRC1 complex" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048706 "embryonic skeletal system development" evidence=IGI]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
MGI:MGI:99161 Pfam:PF00097 Prosite:PS00518 GO:GO:0043066
GO:GO:0009952 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0001701 GO:GO:0016573 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0048704
GO:GO:0016604 InterPro:IPR017907 eggNOG:NOG304672
GeneTree:ENSGT00550000074463 HOGENOM:HOG000231945
HOVERGEN:HBG052826 OrthoDB:EOG4KSPKG GO:GO:0035102 GO:GO:0001739
CTD:7703 KO:K11460 OMA:DRDEKKG EMBL:D90085 EMBL:AF483502
EMBL:AF483503 EMBL:BC016419 IPI:IPI00316639 PIR:A37991
RefSeq:NP_001156779.1 RefSeq:NP_001156780.1 RefSeq:NP_033571.1
UniGene:Mm.2418 ProteinModelPortal:P23798 SMR:P23798 DIP:DIP-37645N
IntAct:P23798 MINT:MINT-1172293 STRING:P23798 PhosphoSite:P23798
PRIDE:P23798 Ensembl:ENSMUST00000018681 Ensembl:ENSMUST00000103148
Ensembl:ENSMUST00000169807 Ensembl:ENSMUST00000179765 GeneID:22658
KEGG:mmu:22658 InParanoid:P23798 ChiTaRS:PCGF2 NextBio:303067
Bgee:P23798 CleanEx:MM_PCGF2 Genevestigator:P23798
GermOnline:ENSMUSG00000018537 Uniprot:P23798
Length = 342
Score = 123 (48.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 24/83 (28%), Positives = 40/83 (48%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDK 167
S+R D ++ L P + K
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFK 88
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 18/85 (21%), Positives = 43/85 (50%)
Query: 382 YLCCRPTLSVRHLCQYVAHQTALQAS-EIEIYL----VKELHSKINL----PSSSNSLMI 432
+L C ++V HL +++ ++ + + ++EI +KE ++ +++ P N +
Sbjct: 165 FLRCPAAMTVMHLAKFLRNKMDVPSKYKVEILYEDEPLKEYYTLMDIAYIYPWRRNGPL- 223
Query: 433 DPCKDKLQVLNEQETLTGLQTQNLG 457
P K ++Q ++ TL + T + G
Sbjct: 224 -PLKYRVQPACKRLTLPTVPTPSEG 247
>RGD|1305097 [details] [associations]
symbol:Pcgf2 "polycomb group ring finger 2" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=IEA;ISO] [GO:0001739 "sex
chromatin" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0016573 "histone
acetylation" evidence=IEA;ISO] [GO:0016604 "nuclear body"
evidence=IEA;ISO] [GO:0031519 "PcG protein complex" evidence=ISO]
[GO:0035102 "PRC1 complex" evidence=IEA;ISO] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA;ISO] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA;ISO]
[GO:0048706 "embryonic skeletal system development" evidence=ISO]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 RGD:1305097 Prosite:PS00518 GO:GO:0043066
GO:GO:0009952 GO:GO:0046872 GO:GO:0008270 GO:GO:0001701
GO:GO:0016573 GO:GO:0003682 GO:GO:0016567 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0048704
EMBL:CH473948 GO:GO:0016604 InterPro:IPR017907 eggNOG:NOG304672
GeneTree:ENSGT00550000074463 HOGENOM:HOG000231945
HOVERGEN:HBG052826 OrthoDB:EOG4KSPKG GO:GO:0035102 GO:GO:0001739
CTD:7703 KO:K11460 EMBL:BC167059 IPI:IPI00191064
RefSeq:NP_001099306.1 UniGene:Rn.11826 SMR:B2RZ82 STRING:B2RZ82
Ensembl:ENSRNOT00000017241 GeneID:287662 KEGG:rno:287662
UCSC:RGD:1305097 NextBio:626761 Genevestigator:B2RZ82
Uniprot:B2RZ82
Length = 342
Score = 123 (48.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 24/83 (28%), Positives = 40/83 (48%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDK 167
S+R D ++ L P + K
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFK 88
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 18/85 (21%), Positives = 43/85 (50%)
Query: 382 YLCCRPTLSVRHLCQYVAHQTALQAS-EIEIYL----VKELHSKINL----PSSSNSLMI 432
+L C ++V HL +++ ++ + + ++EI +KE ++ +++ P N +
Sbjct: 165 FLRCPAAMTVMHLAKFLRNKMDVPSKYKVEILYEDEPLKEYYTLMDIAYIYPWRRNGPL- 223
Query: 433 DPCKDKLQVLNEQETLTGLQTQNLG 457
P K ++Q ++ TL + T + G
Sbjct: 224 -PLKYRVQPACKRLTLPTVPTPSEG 247
>UNIPROTKB|P35227 [details] [associations]
symbol:PCGF2 "Polycomb group RING finger protein 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0031519
"PcG protein complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0035102 "PRC1 complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0043066 GO:GO:0009952 GO:GO:0046872 GO:GO:0003677
EMBL:CH471152 GO:GO:0008270 GO:GO:0001701 GO:GO:0016573
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 GO:GO:0016567
GO:GO:0000122 GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC006449 GO:GO:0004842 GO:GO:0048704 GO:GO:0016604
InterPro:IPR017907 eggNOG:NOG304672 HOGENOM:HOG000231945
HOVERGEN:HBG052826 OrthoDB:EOG4KSPKG GO:GO:0035102
UniGene:Hs.713595 GO:GO:0001739 EMBL:D13969 EMBL:BX647429
EMBL:BC004858 EMBL:BC024255 IPI:IPI00017302 PIR:JN0717
RefSeq:NP_009075.1 UniGene:Hs.371617 ProteinModelPortal:P35227
SMR:P35227 DIP:DIP-41880N IntAct:P35227 MINT:MINT-158325
STRING:P35227 PhosphoSite:P35227 DMDM:462585 PRIDE:P35227
DNASU:7703 Ensembl:ENST00000360797 Ensembl:ENST00000580830
Ensembl:ENST00000581345 GeneID:7703 KEGG:hsa:7703 UCSC:uc002hqp.1
CTD:7703 GeneCards:GC17M036890 HGNC:HGNC:12929 HPA:HPA047732
MIM:600346 neXtProt:NX_P35227 PharmGKB:PA37516 InParanoid:P35227
KO:K11460 OMA:DRDEKKG GenomeRNAi:7703 NextBio:29858 Bgee:P35227
CleanEx:HS_PCGF2 Genevestigator:P35227 GermOnline:ENSG00000056661
Uniprot:P35227
Length = 344
Score = 123 (48.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 24/83 (28%), Positives = 40/83 (48%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDK 167
S+R D ++ L P + K
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFK 88
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 17/85 (20%), Positives = 43/85 (50%)
Query: 382 YLCCRPTLSVRHLCQYVAHQTALQAS-EIEIYL----VKELHSKINL----PSSSNSLMI 432
+L C ++V HL +++ ++ + + ++E+ +KE ++ +++ P N +
Sbjct: 165 FLRCPAAMTVMHLAKFLRNKMDVPSKYKVEVLYEDEPLKEYYTLMDIAYIYPWRRNGPL- 223
Query: 433 DPCKDKLQVLNEQETLTGLQTQNLG 457
P K ++Q ++ TL + T + G
Sbjct: 224 -PLKYRVQPACKRLTLATVPTPSEG 247
>UNIPROTKB|F1N541 [details] [associations]
symbol:TRIM34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646 KO:K11999
CTD:117854 EMBL:DAAA02040907 EMBL:DAAA02040908 IPI:IPI00883463
RefSeq:NP_001192118.1 UniGene:Bt.111657 Ensembl:ENSBTAT00000015712
GeneID:514492 KEGG:bta:514492 OMA:HHKHEYR NextBio:20871361
ArrayExpress:F1N541 Uniprot:F1N541
Length = 487
Score = 105 (42.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECID----KAM--RLGNNECPACRT 140
L DI+ EV CPICL ++ + ++ +C H FC+ CI ++M + G + CP C+T
Sbjct: 6 LVDIQDEVTCPICLELLTEPLSI-DCGHSFCQACITADNKESMPGQEGQSRCPVCQT 61
Score = 62 (26.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 34/140 (24%), Positives = 62/140 (44%)
Query: 327 RHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLV-------LVSLDEQRIPGLQ 379
R +S N +R+ K D+L+S+ +K++Q + + L + E + +Q
Sbjct: 166 REKRISWKNQMEPERHRIQKQFDHLRSILDKEEQRQLKKLEEEERRGLNIIAEAEVELVQ 225
Query: 380 QPYLCCRPTLS-VRHLCQYVAHQTALQASEI----EIYLVKELHSKINLPSSSNSLMIDP 434
Q R +S + H CQ A + S++ E + +K+ + LP+ S+ P
Sbjct: 226 QSQ-SLRELISDLEHRCQGSATELLQDVSDVAKRSEFWTLKKPEA---LPTKLKSMFRAP 281
Query: 435 -CKDKLQVLNEQETLTGLQT 453
K L+V E LT +Q+
Sbjct: 282 DLKKMLRVFRE---LTDVQS 298
>RGD|1306904 [details] [associations]
symbol:Pcgf6 "polycomb group ring finger 6" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;ISS] [GO:0035102 "PRC1 complex"
evidence=ISO;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
RGD:1306904 Prosite:PS00518 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826
GO:GO:0035102 HOGENOM:HOG000231946 CTD:84108 eggNOG:NOG286828
KO:K11470 OMA:IGANEDT OrthoDB:EOG41ZFBD EMBL:BC083820
IPI:IPI00361558 RefSeq:NP_001013172.1 UniGene:Rn.16897
ProteinModelPortal:Q5XI70 SMR:Q5XI70 PRIDE:Q5XI70
Ensembl:ENSRNOT00000027450 GeneID:309457 KEGG:rno:309457
UCSC:RGD:1306904 InParanoid:Q5XI70 NextBio:660834
Genevestigator:Q5XI70 GermOnline:ENSRNOG00000020250 Uniprot:Q5XI70
Length = 351
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 28/96 (29%), Positives = 45/96 (46%)
Query: 44 DHSNNLEEQQPPQDSTPAAAADVDGNESDRSRSS-GDGEKDEFVIVKLSDIRKEVQCPIC 102
D+ LEE + ++ + + S R S D E +E ++ L ++ + C IC
Sbjct: 81 DYDEELEEDEEMEEEEEEE--EEMSHFSLRLESGRADSEDEEERLINLVELTPYILCSIC 138
Query: 103 LGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
G + T+ ECLH FC+ CI + +N CP C
Sbjct: 139 KGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 173
>UNIPROTKB|J3KSI2 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000578107
Uniprot:J3KSI2
Length = 108
Score = 100 (40.3 bits), Expect = 0.00016, P = 0.00016
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
CP+C +++ C H FCR+C AMR CP CR + R
Sbjct: 18 CPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVTRR 64
>UNIPROTKB|F1PTU1 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031519 "PcG protein complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005813 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 EMBL:AAEX03015404 EMBL:AAEX03015405
EMBL:AAEX03015406 Ensembl:ENSCAFT00000011620 Uniprot:F1PTU1
Length = 252
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC--RTHCASR-R 146
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C + H +
Sbjct: 9 VKDFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGIQVHETNPLE 67
Query: 147 SLRDDLNYDALIAALYPDI 165
LR D + +I L P +
Sbjct: 68 MLRLDNTLEEIIFKLVPGL 86
>UNIPROTKB|E1BYN8 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
KO:K11489 OMA:FYQSYPM CTD:84333 EMBL:AADN02027727 IPI:IPI00603520
RefSeq:XP_421668.1 UniGene:Gga.14951 ProteinModelPortal:E1BYN8
Ensembl:ENSGALT00000010507 GeneID:423796 KEGG:gga:423796
NextBio:20826216 Uniprot:E1BYN8
Length = 256
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC--RTHCASR-R 146
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C + H +
Sbjct: 9 VKDFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 147 SLRDDLNYDALIAALYPDI 165
LR D + +I L P +
Sbjct: 68 MLRLDNTLEEIIFKLVPGL 86
>UNIPROTKB|F1PTT1 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 KO:K11489 OMA:FYQSYPM CTD:84333
EMBL:AAEX03015404 EMBL:AAEX03015405 EMBL:AAEX03015406
RefSeq:XP_543923.2 ProteinModelPortal:F1PTT1
Ensembl:ENSCAFT00000011621 GeneID:486794 KEGG:cfa:486794
Uniprot:F1PTT1
Length = 256
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC--RTHCASR-R 146
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C + H +
Sbjct: 9 VKDFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGIQVHETNPLE 67
Query: 147 SLRDDLNYDALIAALYPDI 165
LR D + +I L P +
Sbjct: 68 MLRLDNTLEEIIFKLVPGL 86
>ZFIN|ZDB-GENE-060421-8366 [details] [associations]
symbol:trim35-24 "tripartite motif containing
35-24" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-060421-8366 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726 HOGENOM:HOG000124586
OrthoDB:EOG4QNMW8 GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887
EMBL:AL954363 EMBL:BC171409 EMBL:BC171411 IPI:IPI00608895
RefSeq:NP_001038176.1 UniGene:Dr.132955 Ensembl:ENSDART00000057459
GeneID:557392 KEGG:dre:557392 CTD:557392 NextBio:20881973
Uniprot:Q1MT09
Length = 460
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 87 IVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN-ECPACRTHCASR 145
+ L+D +E+ CP+C I R ++ C H C+EC+ + R ECP CR R
Sbjct: 3 MASLNDSEEELSCPVCCEIFRNP-VLLSCSHSVCKECLQQYWRTKTTQECPVCR-----R 56
Query: 146 RSLRDD 151
RS RDD
Sbjct: 57 RSSRDD 62
>RGD|1307403 [details] [associations]
symbol:Bmi1 "Bmi1 polycomb ring finger oncogene" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000151 "ubiquitin ligase complex" evidence=ISO] [GO:0001501
"skeletal system development" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0003682 "chromatin
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006959 "humoral immune
response" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0010468 "regulation of gene expression" evidence=ISO]
[GO:0016573 "histone acetylation" evidence=ISO] [GO:0016574
"histone ubiquitination" evidence=ISO] [GO:0016604 "nuclear body"
evidence=ISO] [GO:0021903 "rostrocaudal neural tube patterning"
evidence=ISO] [GO:0030097 "hemopoiesis" evidence=ISO] [GO:0030890
"positive regulation of B cell proliferation" evidence=ISO]
[GO:0031519 "PcG protein complex" evidence=ISO] [GO:0033092
"positive regulation of immature T cell proliferation in thymus"
evidence=ISO] [GO:0035102 "PRC1 complex" evidence=ISO] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0048103 "somatic stem cell division" evidence=ISO] [GO:0048146
"positive regulation of fibroblast proliferation" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0048706 "embryonic skeletal system development" evidence=ISO]
[GO:0051443 "positive regulation of ubiquitin-protein ligase
activity" evidence=ISO] [GO:0071535 "RING-like zinc finger domain
binding" evidence=ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 RGD:1307403 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 IPI:IPI00870411 Ensembl:ENSRNOT00000022315
UCSC:RGD:1307403 Uniprot:D3ZLC8
Length = 200
Score = 114 (45.2 bits), Expect = 0.00022, P = 0.00022
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDK 167
L R D ++ L P + K
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFK 88
>RGD|1583513 [details] [associations]
symbol:Pcgf5 "polycomb group ring finger 5" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005813
"centrosome" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 RGD:1583513 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 EMBL:AC127789
IPI:IPI00763179 Ensembl:ENSRNOT00000025020 UCSC:RGD:1583513
ArrayExpress:E9PTD5 Uniprot:E9PTD5
Length = 236
Score = 116 (45.9 bits), Expect = 0.00023, P = 0.00023
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC--RTHCASR-R 146
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C + H +
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 147 SLRDDLNYDALIAALYPDI 165
LR D + +I L P +
Sbjct: 68 MLRLDNTLEEIIFKLVPGL 86
>UNIPROTKB|Q5T8Z1 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=IEA] [GO:0033092 "positive regulation of
immature T cell proliferation in thymus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0043066 GO:GO:0007420 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0001701 GO:GO:0016573 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0006959 GO:GO:0048704 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0031519 HOGENOM:HOG000231945
HOVERGEN:HBG052826 OrthoDB:EOG4KSPKG GO:GO:0016574 GO:GO:0033092
GO:GO:0021903 GO:GO:0048103 EMBL:AL158211 UniGene:Hs.380403
UniGene:Hs.731287 HGNC:HGNC:1066 IPI:IPI00643590 SMR:Q5T8Z1
IntAct:Q5T8Z1 Ensembl:ENST00000417470 Uniprot:Q5T8Z1
Length = 207
Score = 114 (45.2 bits), Expect = 0.00026, P = 0.00026
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDK 167
L R D ++ L P + K
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFK 88
>UNIPROTKB|A0JN86 [details] [associations]
symbol:PCGF5 "Polycomb group RING finger protein 5"
species:9913 "Bos taurus" [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
HOVERGEN:HBG052826 eggNOG:NOG277991 HOGENOM:HOG000231946 KO:K11489
OrthoDB:EOG4NKBW6 OMA:FYQSYPM EMBL:BC126565 IPI:IPI00698156
RefSeq:NP_001071448.1 UniGene:Bt.59906 ProteinModelPortal:A0JN86
SMR:A0JN86 PRIDE:A0JN86 Ensembl:ENSBTAT00000006533 GeneID:528946
KEGG:bta:528946 CTD:84333 InParanoid:A0JN86
BioCyc:CATTLE:528946-MONOMER NextBio:20874930 Uniprot:A0JN86
Length = 255
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC--RTHCASR-R 146
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C + H +
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 147 SLRDDLNYDALIAALYPDI 165
LR D + +I L P +
Sbjct: 68 MLRLDNTLEEIIFKLVPGL 86
>UNIPROTKB|Q86SE9 [details] [associations]
symbol:PCGF5 "Polycomb group RING finger protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 EMBL:CH471066 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 HOGENOM:HOG000231946 KO:K11489 OrthoDB:EOG4NKBW6
OMA:FYQSYPM CTD:84333 EMBL:AK303014 EMBL:AL832003 EMBL:AL832496
EMBL:BC007377 EMBL:BC051845 IPI:IPI00328390 IPI:IPI00449145
RefSeq:NP_001243478.1 RefSeq:NP_001244030.1 RefSeq:NP_115749.2
UniGene:Hs.500512 ProteinModelPortal:Q86SE9 SMR:Q86SE9
IntAct:Q86SE9 STRING:Q86SE9 PhosphoSite:Q86SE9 DMDM:74750353
PRIDE:Q86SE9 DNASU:84333 Ensembl:ENST00000336126
Ensembl:ENST00000371687 Ensembl:ENST00000543648 GeneID:84333
KEGG:hsa:84333 UCSC:uc001khh.3 GeneCards:GC10P092979
HGNC:HGNC:28264 HPA:HPA038349 neXtProt:NX_Q86SE9
PharmGKB:PA134929149 InParanoid:Q86SE9 PhylomeDB:Q86SE9
ChiTaRS:PCGF5 GenomeRNAi:84333 NextBio:74097 Bgee:Q86SE9
CleanEx:HS_PCGF5 Genevestigator:Q86SE9 Uniprot:Q86SE9
Length = 256
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC--RTHCASR-R 146
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C + H +
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 147 SLRDDLNYDALIAALYPDI 165
LR D + +I L P +
Sbjct: 68 MLRLDNTLEEIIFKLVPGL 86
>MGI|MGI:1923505 [details] [associations]
symbol:Pcgf5 "polycomb group ring finger 5" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1923505
Pfam:PF00097 Prosite:PS00518 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826 eggNOG:NOG277991
HOGENOM:HOG000231946 KO:K11489 OrthoDB:EOG4NKBW6 OMA:FYQSYPM
CTD:84333 EMBL:AK002387 EMBL:AK017984 EMBL:AK146133 EMBL:BC139258
EMBL:BC139259 EMBL:BC145590 IPI:IPI00135919 IPI:IPI00653832
RefSeq:NP_083784.1 UniGene:Mm.259180 UniGene:Mm.381165
UniGene:Mm.488093 UniGene:Mm.490414 ProteinModelPortal:Q3UK78
SMR:Q3UK78 IntAct:Q3UK78 PhosphoSite:Q3UK78 PRIDE:Q3UK78
Ensembl:ENSMUST00000062389 Ensembl:ENSMUST00000071267 GeneID:76073
KEGG:mmu:76073 UCSC:uc008hhi.1 UCSC:uc008hhk.1 InParanoid:Q3UK78
NextBio:344549 Bgee:Q3UK78 CleanEx:MM_PCGF5 Genevestigator:Q3UK78
Uniprot:Q3UK78
Length = 256
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC--RTHCASR-R 146
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C + H +
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 147 SLRDDLNYDALIAALYPDI 165
LR D + +I L P +
Sbjct: 68 MLRLDNTLEEIIFKLVPGL 86
>MGI|MGI:2141847 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070063 "RNA polymerase binding" evidence=ISO]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
MGI:MGI:2141847 Prosite:PS00518 GO:GO:0005634 GO:GO:0035556
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM ChiTaRS:PHRF1
GO:GO:0070063 EMBL:AC108908 EMBL:AC163434 EMBL:BC094566
EMBL:BC138446 EMBL:BC145719 EMBL:AK129387 IPI:IPI00881116
IPI:IPI00881246 RefSeq:NP_001074587.1 UniGene:Mm.248656
ProteinModelPortal:A6H619 SMR:A6H619 STRING:A6H619 PRIDE:A6H619
Ensembl:ENSMUST00000106027 Ensembl:ENSMUST00000122143 GeneID:101471
KEGG:mmu:101471 UCSC:uc009kkb.1 UCSC:uc009kkc.1
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 InParanoid:Q505G1
NextBio:354944 Bgee:A6H619 Genevestigator:A6H619 Uniprot:A6H619
Length = 1682
Score = 105 (42.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 33/99 (33%), Positives = 46/99 (46%)
Query: 44 DHSNNLEEQQPPQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICL 103
+ + L E++ P+D + + ++ DG E + G K E V SD E CPICL
Sbjct: 57 EETEGLSEEEDPEDRSGSEDSE-DGVEMATAAIETQG-KLEASSVPNSDDDAE-SCPICL 113
Query: 104 GIIRKTR--TVMECLHRFCRECIDKAMRLGNNECPACRT 140
R T C H FC +CI + R N+ CP RT
Sbjct: 114 NAFRDQAVGTPETCAHYFCLDCIIEWSRNANS-CPVDRT 151
Score = 71 (30.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 25/82 (30%), Positives = 35/82 (42%)
Query: 191 AQTFQRQTEAL-GRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDA 249
A + R T + RK+T K + R H R R + G R+ + E A
Sbjct: 998 ASSRSRSTSSSRSRKKTKKKKKKVAREHQRTRSSTRSGSRDRTSRSVSPVAEEHTRRHRA 1057
Query: 250 GKDS--SSADERSTEVRPKRRK 269
S SS+D S++ R KRRK
Sbjct: 1058 KTKSRRSSSDRASSQDRAKRRK 1079
>ZFIN|ZDB-GENE-110920-8 [details] [associations]
symbol:trim35-20 "tripartite motif containing 35-20"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-110920-8 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:BX005105 IPI:IPI00931157 RefSeq:NP_001038474.1
ProteinModelPortal:F2Z4W9 Ensembl:ENSDART00000036273 GeneID:563088
KEGG:dre:563088 CTD:563088 OMA:REQITHE Uniprot:F2Z4W9
Length = 453
Score = 119 (46.9 bits), Expect = 0.00041, P = 0.00041
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN-ECPACRTHCASRRSLR 149
S + CP+C I KT ++ C H FC+EC+ + ++ N ECP CR RRS +
Sbjct: 3 SSAEYDYSCPVCQDIF-KTPVILSCSHSFCKECLQQFWKIKNTQECPVCR-----RRSSK 56
Query: 150 DD 151
+D
Sbjct: 57 ED 58
>UNIPROTKB|E7EQW4 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780 EMBL:AC135721
HGNC:HGNC:1100 ChiTaRS:BRCA1 IPI:IPI00947541
ProteinModelPortal:E7EQW4 SMR:E7EQW4 Ensembl:ENST00000476777
ArrayExpress:E7EQW4 Bgee:E7EQW4 Uniprot:E7EQW4
Length = 222
Score = 113 (44.8 bits), Expect = 0.00043, P = 0.00043
Identities = 22/74 (29%), Positives = 46/74 (62%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAAL 161
L++ + L+ L
Sbjct: 73 LQESTRFSQLVEEL 86
>UNIPROTKB|Q1L721 [details] [associations]
symbol:rnf138 "E3 ubiquitin-protein ligase RNF138"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0031624 "ubiquitin conjugating enzyme binding"
evidence=IPI] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0051865 "protein autoubiquitination" evidence=IDA]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016055
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042787 GO:GO:0051865
HOVERGEN:HBG074331 CTD:51444 KO:K10668 EMBL:DQ011285
RefSeq:NP_001089974.1 UniGene:Xl.52927 ProteinModelPortal:Q1L721
GeneID:735045 KEGG:xla:735045 Xenbase:XB-GENE-1001378
Uniprot:Q1L721
Length = 222
Score = 113 (44.8 bits), Expect = 0.00043, P = 0.00043
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
S+I +E CP+C I++ C H FCR+C AM+ G CP CR
Sbjct: 9 SEITEEFLCPVCQEILQTPVRTQTCRHVFCRKCFMLAMKSGGAYCPLCR 57
>UNIPROTKB|C9JNB9 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC024221 HGNC:HGNC:30834
IPI:IPI00946347 ProteinModelPortal:C9JNB9 SMR:C9JNB9 STRING:C9JNB9
Ensembl:ENST00000468542 ArrayExpress:C9JNB9 Bgee:C9JNB9
Uniprot:C9JNB9
Length = 68
Score = 96 (38.9 bits), Expect = 0.00043, P = 0.00043
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN-----------ECP 136
+++ + +E+ CPIC I R V+ C H FCR C++ ++ N +CP
Sbjct: 6 LEMHNFEEELTCPICYSIFEDPR-VLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCP 64
Query: 137 ACRT 140
CR+
Sbjct: 65 NCRS 68
>UNIPROTKB|F1PW68 [details] [associations]
symbol:DTX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00440000035370 EMBL:AAEX03006952
Ensembl:ENSCAFT00000035912 OMA:TMIVERD Uniprot:F1PW68
Length = 247
Score = 114 (45.2 bits), Expect = 0.00045, P = 0.00045
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E CPICLG I+ +T+ +C H FC CI +A+++ CP C
Sbjct: 60 QESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC 102
>UNIPROTKB|F1PEV3 [details] [associations]
symbol:DTX3L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042393 "histone binding" evidence=IEA]
[GO:0010390 "histone monoubiquitination" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0006974
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0010390 KO:K06058
GeneTree:ENSGT00440000035370 CTD:151636 OMA:GIQKGNQ
EMBL:AAEX03017027 RefSeq:XP_535762.2 ProteinModelPortal:F1PEV3
Ensembl:ENSCAFT00000018969 GeneID:478586 KEGG:cfa:478586
Uniprot:F1PEV3
Length = 736
Score = 121 (47.7 bits), Expect = 0.00049, P = 0.00049
Identities = 32/100 (32%), Positives = 48/100 (48%)
Query: 41 LQRDHSNNLEEQQPPQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCP 100
L D N E+ + P D T + +++ S SSG +D ++E +C
Sbjct: 512 LAGDQGN--EDHETPMD-TDSNDSEMASPTLQHSVSSGGSGED----------KEEDKCS 558
Query: 101 ICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRT 140
IC+ IIR +++C H FC CIDKA+ CP C+T
Sbjct: 559 ICMDIIRNKHVLLKCKHAFCTPCIDKALSY-KPVCPVCQT 597
>ZFIN|ZDB-GENE-060526-299 [details] [associations]
symbol:si:dkey-3h3.3 "si:dkey-3h3.3" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-060526-299 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:NOG84763 HOGENOM:HOG000007352 GeneTree:ENSGT00440000035370
EMBL:BX470172 IPI:IPI00817514 RefSeq:NP_001116534.1
UniGene:Dr.74755 Ensembl:ENSDART00000147767 GeneID:100144568
KEGG:dre:100144568 InParanoid:A2BGH5 OMA:PKGGTMT OrthoDB:EOG49S67K
NextBio:20791457 Uniprot:A2BGH5
Length = 441
Score = 118 (46.6 bits), Expect = 0.00051, P = 0.00051
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 89 KLSDIRKEVQCPICLGIIRKTR-TVM-ECLHRFCRECIDKAMRLGNNECPAC 138
K SD K+ CPICL I+ TV+ +C HRFC++C+D A +L CP C
Sbjct: 249 KTSDQAKDETCPICLETIKMPESTVLTKCQHRFCKDCLDTAFQL-KPACPIC 299
>ZFIN|ZDB-GENE-040801-199 [details] [associations]
symbol:trim35-36 "tripartite motif containing
35-36" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-040801-199 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726 HOGENOM:HOG000124586
OrthoDB:EOG4QNMW8 GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887
EMBL:CU137686 EMBL:BC077164 IPI:IPI00511023 RefSeq:NP_001003462.1
UniGene:Dr.73072 Ensembl:ENSDART00000031534 GeneID:445068
KEGG:dre:445068 CTD:445068 InParanoid:Q6DEF5 OMA:WIVELKE
NextBio:20831830 Uniprot:Q6DEF5
Length = 450
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN-ECPACRTHCASRRSL 148
S ++ CP+C I KT ++ C H FC+EC+ + R N ECP CR + R L
Sbjct: 3 SSAEYDLTCPVCQDIF-KTPVILSCSHSFCKECLQQFWRNKNTQECPVCRRRSSKDRPL 60
>UNIPROTKB|I3LUY7 [details] [associations]
symbol:I3LUY7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00400000022349 PANTHER:PTHR15067:SF3 EMBL:CU855572
Ensembl:ENSSSCT00000029099 OMA:VEMKEHR Uniprot:I3LUY7
Length = 135
Score = 98 (39.6 bits), Expect = 0.00053, P = 0.00053
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 70 ESDRSRSSGDGEKDEFVIVKLSDI-RKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM 128
++ + +K+E V+ ++D+ E+QC IC + T + C H FC CI++ M
Sbjct: 24 QTKEEKEKVQAQKEE-VLSHMNDVLENELQCIICSEYFIEAVT-LNCAHSFCSYCINEWM 81
Query: 129 RLGNNECPACRTHCASR 145
+ ECP CR S+
Sbjct: 82 KR-KVECPICRKDIKSK 97
>MGI|MGI:2135752 [details] [associations]
symbol:Dtx3 "deltex 3 homolog (Drosophila)" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IDA;TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2135752 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0007219 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG84763 HOGENOM:HOG000007352 KO:K06058
GeneTree:ENSGT00440000035370 CTD:196403 HOVERGEN:HBG045495
EMBL:AB015425 EMBL:BC099687 EMBL:BC138304 EMBL:BC157899
IPI:IPI00330413 RefSeq:NP_109639.1 UniGene:Mm.271724
ProteinModelPortal:Q80V91 SMR:Q80V91 STRING:Q80V91
PhosphoSite:Q80V91 PaxDb:Q80V91 PRIDE:Q80V91
Ensembl:ENSMUST00000038217 GeneID:80904 KEGG:mmu:80904
UCSC:uc007hil.1 ChiTaRS:DTX3 NextBio:350250 Bgee:Q80V91
CleanEx:MM_DTX3 Genevestigator:Q80V91 GermOnline:ENSMUSG00000040415
Uniprot:Q80V91
Length = 347
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E CPICLG I+ +T+ +C H FC CI +A+++ CP C
Sbjct: 160 QETTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC 202
>UNIPROTKB|F1LY78 [details] [associations]
symbol:Dtx3 "Protein Dtx3" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 RGD:1566181
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00440000035370
IPI:IPI00991273 ProteinModelPortal:F1LY78
Ensembl:ENSRNOT00000006815 ArrayExpress:F1LY78 Uniprot:F1LY78
Length = 347
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E CPICLG I+ +T+ +C H FC CI +A+++ CP C
Sbjct: 160 QETTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC 202
>TAIR|locus:2094608 [details] [associations]
symbol:AT3G23060 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:NOG304672 EMBL:AB026655 KO:K16277 EMBL:AY099845
EMBL:BT006623 IPI:IPI00546320 RefSeq:NP_188946.2 UniGene:At.37773
UniGene:At.67676 ProteinModelPortal:Q9LS86 SMR:Q9LS86 IntAct:Q9LS86
PRIDE:Q9LS86 EnsemblPlants:AT3G23060.1 GeneID:821880
KEGG:ath:AT3G23060 TAIR:At3g23060 HOGENOM:HOG000153088
InParanoid:Q9LS86 OMA:NKFINER PhylomeDB:Q9LS86
ProtClustDB:CLSN2917950 Genevestigator:Q9LS86 Uniprot:Q9LS86
Length = 480
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 24/74 (32%), Positives = 35/74 (47%)
Query: 92 DIRKEVQCPICLGIIRKTRTVMECLHRFCRECI-DKAMRLGNNECPACRTHCA--SRRSL 148
+++ + CPIC + T+ ECLH FCR CI +K + N CP C + L
Sbjct: 9 EVKPCLACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPVCNVNLGVFPLEKL 68
Query: 149 RDDLNYDALIAALY 162
R D + L +Y
Sbjct: 69 RSDCTWQDLKLKIY 82
>UNIPROTKB|Q5EBN2 [details] [associations]
symbol:TRIM61 "Putative tripartite motif-containing protein
61" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HSSP:Q9CQJ4 KO:K12029 EMBL:BC089393
IPI:IPI00058949 RefSeq:NP_001012414.1 UniGene:Hs.654633
ProteinModelPortal:Q5EBN2 SMR:Q5EBN2 STRING:Q5EBN2
PhosphoSite:Q5EBN2 DMDM:74741447 PRIDE:Q5EBN2
Ensembl:ENST00000329314 GeneID:391712 KEGG:hsa:391712
UCSC:uc003iqw.3 CTD:391712 GeneCards:GC04M165875 HGNC:HGNC:24339
HPA:HPA049109 neXtProt:NX_Q5EBN2 PharmGKB:PA134868214
eggNOG:NOG257669 HOGENOM:HOG000203866 HOVERGEN:HBG094090
InParanoid:Q5EBN2 OMA:SAHFNLR OrthoDB:EOG4SXNDK GenomeRNAi:391712
NextBio:104795 Bgee:Q5EBN2 CleanEx:HS_TRIM61 Genevestigator:Q5EBN2
Uniprot:Q5EBN2
Length = 209
Score = 111 (44.1 bits), Expect = 0.00060, P = 0.00060
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMR-LGNN-ECPACRTH 141
EFV L+D+R E CPICL ++ T+ C H FC CI + + L ++ CP C
Sbjct: 2 EFVTA-LADLRAEASCPICLDYLKDPVTI-SCGHNFCLSCIIMSWKDLHDSFPCPFCHFC 59
Query: 142 CASRR 146
C R+
Sbjct: 60 CPERK 64
>UNIPROTKB|G3MWZ9 [details] [associations]
symbol:TRIM34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
EMBL:DAAA02040907 EMBL:DAAA02040908 Ensembl:ENSBTAT00000063426
Uniprot:G3MWZ9
Length = 844
Score = 105 (42.0 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECID----KAM--RLGNNECPACRT 140
L DI+ EV CPICL ++ + ++ +C H FC+ CI ++M + G + CP C+T
Sbjct: 34 LVDIQDEVTCPICLELLTEPLSI-DCGHSFCQACITADNKESMPGQEGQSRCPVCQT 89
Score = 62 (26.9 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 34/140 (24%), Positives = 62/140 (44%)
Query: 327 RHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLV-------LVSLDEQRIPGLQ 379
R +S N +R+ K D+L+S+ +K++Q + + L + E + +Q
Sbjct: 194 REKRISWKNQMEPERHRIQKQFDHLRSILDKEEQRQLKKLEEEERRGLNIIAEAEVELVQ 253
Query: 380 QPYLCCRPTLS-VRHLCQYVAHQTALQASEI----EIYLVKELHSKINLPSSSNSLMIDP 434
Q R +S + H CQ A + S++ E + +K+ + LP+ S+ P
Sbjct: 254 QSQ-SLRELISDLEHRCQGSATELLQDVSDVAKRSEFWTLKKPEA---LPTKLKSMFRAP 309
Query: 435 -CKDKLQVLNEQETLTGLQT 453
K L+V E LT +Q+
Sbjct: 310 DLKKMLRVFRE---LTDVQS 326
>ZFIN|ZDB-GENE-060512-34 [details] [associations]
symbol:pcgf5b "polycomb group ring finger 5b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 ZFIN:ZDB-GENE-060512-34 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
HOVERGEN:HBG052826 eggNOG:NOG277991 KO:K11489 OrthoDB:EOG4NKBW6
EMBL:BC116619 IPI:IPI00630550 RefSeq:NP_001038700.1
UniGene:Dr.78700 ProteinModelPortal:Q1JPS1 SMR:Q1JPS1 STRING:Q1JPS1
Ensembl:ENSDART00000086211 GeneID:692252 KEGG:dre:692252 CTD:692252
InParanoid:Q1JPS1 OMA:FYQSYPM NextBio:20902468 Bgee:Q1JPS1
Uniprot:Q1JPS1
Length = 232
Score = 112 (44.5 bits), Expect = 0.00065, P = 0.00065
Identities = 26/77 (33%), Positives = 38/77 (49%)
Query: 92 DIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC--RTHCASR-RSL 148
D + C +C G + K TV ECLH FC+ CI + +N+CP C + H + L
Sbjct: 11 DFNHFITCFVCKGYLIKPTTVTECLHTFCKSCIVQHFE-DSNDCPKCGIQVHETNPLEML 69
Query: 149 RDDLNYDALIAALYPDI 165
R D + +I L P +
Sbjct: 70 RLDNTLEEVIFKLVPGL 86
>UNIPROTKB|C9IZE0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 OrthoDB:EOG4K3KX1 HGNC:HGNC:30834
HOGENOM:HOG000199013 IPI:IPI00945336 ProteinModelPortal:C9IZE0
SMR:C9IZE0 STRING:C9IZE0 Ensembl:ENST00000471155
ArrayExpress:C9IZE0 Bgee:C9IZE0 Uniprot:C9IZE0
Length = 114
Score = 94 (38.1 bits), Expect = 0.00071, P = 0.00071
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN-----------ECPAC 138
+ + +E+ CPIC I R V+ C H FCR C++ ++ N +CP C
Sbjct: 1 MHNFEEELTCPICYSIFEDPR-VLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNC 59
Query: 139 RT 140
R+
Sbjct: 60 RS 61
>UNIPROTKB|C9J9F0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 HGNC:HGNC:30834 HOGENOM:HOG000199013 IPI:IPI00945495
ProteinModelPortal:C9J9F0 SMR:C9J9F0 STRING:C9J9F0
Ensembl:ENST00000494486 ArrayExpress:C9J9F0 Bgee:C9J9F0
Uniprot:C9J9F0
Length = 111
Score = 94 (38.1 bits), Expect = 0.00071, P = 0.00071
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN-----------ECPAC 138
+ + +E+ CPIC I R V+ C H FCR C++ ++ N +CP C
Sbjct: 1 MHNFEEELTCPICYSIFEDPR-VLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNC 59
Query: 139 RT 140
R+
Sbjct: 60 RS 61
>UNIPROTKB|D6RAL3 [details] [associations]
symbol:SH3RF1 "E3 ubiquitin-protein ligase SH3RF1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005078 "MAP-kinase scaffold activity"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0046328 "regulation
of JNK cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0006917 GO:GO:0046872
GO:GO:0008270 GO:GO:0030027 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0046328 InterPro:IPR017907 EMBL:AC021151 HGNC:HGNC:17650
ChiTaRS:SH3RF1 EMBL:AC096741 EMBL:AC104783 IPI:IPI00967311
ProteinModelPortal:D6RAL3 SMR:D6RAL3 Ensembl:ENST00000510806
ArrayExpress:D6RAL3 Bgee:D6RAL3 Uniprot:D6RAL3
Length = 79
Score = 94 (38.1 bits), Expect = 0.00071, P = 0.00071
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN-ECPACRT 140
++CP+CL + + V+ C H FC+ C+ + N CP CRT
Sbjct: 10 LECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRT 54
>UNIPROTKB|D6RHX5 [details] [associations]
symbol:SH3RF1 "E3 ubiquitin-protein ligase SH3RF1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005078 "MAP-kinase scaffold activity"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0046328 "regulation
of JNK cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0006917 GO:GO:0046872
GO:GO:0008270 GO:GO:0030027 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0046328 InterPro:IPR017907 EMBL:AC021151 HGNC:HGNC:17650
ChiTaRS:SH3RF1 EMBL:AC096741 EMBL:AC104783 IPI:IPI00966916
ProteinModelPortal:D6RHX5 SMR:D6RHX5 Ensembl:ENST00000502315
ArrayExpress:D6RHX5 Bgee:D6RHX5 Uniprot:D6RHX5
Length = 99
Score = 94 (38.1 bits), Expect = 0.00071, P = 0.00071
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN-ECPACRT 140
++CP+CL + + V+ C H FC+ C+ + N CP CRT
Sbjct: 10 LECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRT 54
>UNIPROTKB|H0Y340 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
Ensembl:ENST00000367667 Uniprot:H0Y340
Length = 113
Score = 94 (38.1 bits), Expect = 0.00071, P = 0.00071
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+I D + CPIC +I + + +C H FC +CI +++ NN CP C
Sbjct: 28 LINSYEDKSNDFVCPICFDMIEEAY-MTKCGHSFCYKCIHQSLE-DNNRCPKC 78
>RGD|1566181 [details] [associations]
symbol:Dtx3 "deltex homolog 3 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 RGD:1566181
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0007219
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:GPQLCDS
IPI:IPI00779030 Ensembl:ENSRNOT00000057923 ArrayExpress:F1M4I9
Uniprot:F1M4I9
Length = 397
Score = 116 (45.9 bits), Expect = 0.00071, P = 0.00071
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E CPICLG I+ +T+ +C H FC CI +A+++ CP C
Sbjct: 160 QETTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC 202
>ZFIN|ZDB-GENE-060526-178 [details] [associations]
symbol:pcgf6 "polycomb group ring finger 6"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 ZFIN:ZDB-GENE-060526-178 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826
EMBL:AL928951 HOGENOM:HOG000231946 CTD:84108 eggNOG:NOG286828
KO:K11470 OrthoDB:EOG41ZFBD EMBL:BC139554 IPI:IPI00611926
RefSeq:NP_001082838.1 UniGene:Dr.79341 SMR:A2ATX3 STRING:A2ATX3
Ensembl:ENSDART00000101582 GeneID:555238 KEGG:dre:555238
InParanoid:A2ATX3 OMA:PLMFDRS NextBio:20880870 Uniprot:A2ATX3
Length = 277
Score = 113 (44.8 bits), Expect = 0.00078, P = 0.00078
Identities = 25/91 (27%), Positives = 42/91 (46%)
Query: 49 LEEQQPPQDSTPAAAADVDGNESDRSRSSGDGEK-DEFVIVKLSDIRKEVQCPICLGIIR 107
+EE++ + + A + G + R ++ D+ + L D ++C +C G
Sbjct: 9 VEEREGSTRWSVRSGAYLSGEDETRDTHGAPKQQADDEPSLPLRDFYPYIRCALCNGFFI 68
Query: 108 KTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
T+ ECLH FC+ CI K +N CP C
Sbjct: 69 DATTITECLHTFCKSCIVKHF-FYSNRCPNC 98
>UNIPROTKB|K7GNS2 [details] [associations]
symbol:K7GNS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00700000104307 EMBL:CU693419
Ensembl:ENSSSCT00000034844 Uniprot:K7GNS2
Length = 250
Score = 112 (44.5 bits), Expect = 0.00080, P = 0.00080
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMR--LGNNECPACRTHCASRRS 147
L+ ++ E CPICL ++ T +C H FC CI + G+ CP C HC R S
Sbjct: 7 LAQLQAEASCPICLDYLQDPVTT-DCGHNFCHSCILQRWEDLQGDFPCPVCLQHCPDR-S 64
Query: 148 LR 149
LR
Sbjct: 65 LR 66
>ZFIN|ZDB-GENE-081030-23 [details] [associations]
symbol:trim35-34 "tripartite motif containing 35-34"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081030-23 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726 OrthoDB:EOG4QNMW8
GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887 EMBL:CU539057
IPI:IPI00900847 RefSeq:NP_001137520.1 UniGene:Dr.154012
Ensembl:ENSDART00000036283 GeneID:566050 KEGG:dre:566050
OMA:WALARIT NextBio:20887999 Uniprot:B8JLS7
Length = 452
Score = 119 (46.9 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN-ECPACRT 140
S + + CP+C I KT ++ C H FC+EC+ + R N ECP CRT
Sbjct: 3 SSAKDDYTCPVCQDIF-KTPVILSCGHSFCQECLQQCWRSENTQECPVCRT 52
Score = 39 (18.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 362 DMHLVLVSLDEQRIPGLQQPYLCCRPTLS-VRHLCQYVAHQTALQASEIEIYLVKELHSK 420
+++ L SL EQ + ++ + T+ + + + HQ Q ++ +L E +
Sbjct: 134 ELNTALESLQEQ-LGRKKKSKMVFEETVKYIEYQARSTKHQIKQQFEKLHQFLRDEEEAT 192
Query: 421 INLPSSSNSLMIDPCKDKLQVLN 443
I + K+KL+ +N
Sbjct: 193 ITALNEEEEQKKQMMKEKLEEMN 215
>MGI|MGI:88174 [details] [associations]
symbol:Bmi1 "Bmi1 polycomb ring finger oncogene" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IGI;IDA] [GO:0000151
"ubiquitin ligase complex" evidence=ISO;IDA] [GO:0001501 "skeletal
system development" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IGI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006959 "humoral immune response"
evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0009987 "cellular
process" evidence=TAS] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016573 "histone acetylation" evidence=IGI] [GO:0016574
"histone ubiquitination" evidence=IDA] [GO:0016604 "nuclear body"
evidence=IDA] [GO:0021903 "rostrocaudal neural tube patterning"
evidence=IMP] [GO:0030890 "positive regulation of B cell
proliferation" evidence=IMP] [GO:0031519 "PcG protein complex"
evidence=ISO;IDA] [GO:0033092 "positive regulation of immature T
cell proliferation in thymus" evidence=IMP] [GO:0035102 "PRC1
complex" evidence=ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IMP] [GO:0048146 "positive regulation of fibroblast
proliferation" evidence=ISO] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IGI] [GO:0048706 "embryonic skeletal system
development" evidence=IGI] [GO:0051443 "positive regulation of
ubiquitin-protein ligase activity" evidence=ISO] [GO:0071535
"RING-like zinc finger domain binding" evidence=ISO]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 MGI:MGI:88174
Prosite:PS00518 GO:GO:0005737 GO:GO:0043066 GO:GO:0007420
GO:GO:0005730 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0001701 GO:GO:0016573 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030097 GO:GO:0006959 GO:GO:0048146 GO:GO:0048704
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0051443
GO:GO:0031519 eggNOG:NOG304672 HOGENOM:HOG000231945
HOVERGEN:HBG052826 KO:K11459 OrthoDB:EOG4KSPKG CTD:648 OMA:SNHQSSF
GO:GO:0035102 GO:GO:0016574 GO:GO:0033092 GO:GO:0021903
GO:GO:0048103 EMBL:M64067 EMBL:M64068 EMBL:M64279 EMBL:BC053708
EMBL:BC056384 IPI:IPI00114786 PIR:A39523 RefSeq:NP_031578.2
UniGene:Mm.289584 PDB:2CKL PDBsum:2CKL ProteinModelPortal:P25916
SMR:P25916 DIP:DIP-132N IntAct:P25916 STRING:P25916
PhosphoSite:P25916 PRIDE:P25916 Ensembl:ENSMUST00000028071
Ensembl:ENSMUST00000051929 GeneID:12151 KEGG:mmu:12151
InParanoid:P25916 EvolutionaryTrace:P25916 NextBio:280483
Bgee:P25916 CleanEx:MM_BMI1 Genevestigator:P25916
GermOnline:ENSMUSG00000026739 Uniprot:P25916
Length = 324
Score = 114 (45.2 bits), Expect = 0.00083, P = 0.00083
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDK 167
L R D ++ L P + K
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFK 88
>UNIPROTKB|Q5SDR3 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9031
"Gallus gallus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0051443 "positive regulation of ubiquitin-protein ligase
activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151
InterPro:IPR017907 GO:GO:0051443 GO:GO:0031519 HSSP:P25916
HOVERGEN:HBG052826 KO:K11459 CTD:648 EMBL:AY616032 IPI:IPI00591599
RefSeq:NP_001007989.1 UniGene:Gga.22845 ProteinModelPortal:Q5SDR3
SMR:Q5SDR3 GeneID:493647 KEGG:gga:493647 NextBio:20865453
Uniprot:Q5SDR3
Length = 326
Score = 114 (45.2 bits), Expect = 0.00084, P = 0.00084
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDK 167
L R D ++ L P + K
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFK 88
>UNIPROTKB|Q32KX7 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9913
"Bos taurus" [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0008270
"zinc ion binding" evidence=ISS] [GO:0051443 "positive regulation
of ubiquitin-protein ligase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0071535 "RING-like zinc finger domain
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=IEA] [GO:0048103 "somatic stem
cell division" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0035102 "PRC1 complex"
evidence=IEA] [GO:0033092 "positive regulation of immature T cell
proliferation in thymus" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0030097
"hemopoiesis" evidence=IEA] [GO:0021903 "rostrocaudal neural tube
patterning" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0016574 "histone ubiquitination" evidence=IEA] [GO:0016573
"histone acetylation" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0043066 GO:GO:0007420 GO:GO:0005730
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0001701
GO:GO:0016573 GO:GO:0006351 GO:GO:0003682 GO:GO:0000122
GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030097
GO:GO:0004842 GO:GO:0006959 GO:GO:0048146 GO:GO:0048704
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0051443
GO:GO:0031519 HSSP:P25916 eggNOG:NOG304672
GeneTree:ENSGT00550000074463 HOGENOM:HOG000231945
HOVERGEN:HBG052826 KO:K11459 OrthoDB:EOG4KSPKG EMBL:BC109871
IPI:IPI00710372 RefSeq:NP_001033161.1 UniGene:Bt.89241
ProteinModelPortal:Q32KX7 SMR:Q32KX7 STRING:Q32KX7 PRIDE:Q32KX7
Ensembl:ENSBTAT00000020705 GeneID:510666 KEGG:bta:510666 CTD:648
InParanoid:Q32KX7 OMA:SNHQSSF NextBio:20869556 GO:GO:0035102
GO:GO:0016574 GO:GO:0033092 GO:GO:0021903 GO:GO:0048103
Uniprot:Q32KX7
Length = 326
Score = 114 (45.2 bits), Expect = 0.00084, P = 0.00084
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDK 167
L R D ++ L P + K
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFK 88
>UNIPROTKB|E2RTM4 [details] [associations]
symbol:BMI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071535 "RING-like zinc finger domain
binding" evidence=IEA] [GO:0051443 "positive regulation of
ubiquitin-protein ligase activity" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0048146
"positive regulation of fibroblast proliferation" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0035102 "PRC1
complex" evidence=IEA] [GO:0033092 "positive regulation of immature
T cell proliferation in thymus" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0030097
"hemopoiesis" evidence=IEA] [GO:0021903 "rostrocaudal neural tube
patterning" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0016574 "histone ubiquitination" evidence=IEA] [GO:0016573
"histone acetylation" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0043066 GO:GO:0007420
GO:GO:0005730 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0001701 GO:GO:0016573 GO:GO:0003682 GO:GO:0000122
GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030097
GO:GO:0004842 GO:GO:0006959 GO:GO:0048146 GO:GO:0048704
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0051443
GeneTree:ENSGT00550000074463 KO:K11459 CTD:648 OMA:SNHQSSF
GO:GO:0035102 GO:GO:0016574 GO:GO:0033092 GO:GO:0021903
GO:GO:0048103 EMBL:AAEX03001194 RefSeq:XP_858578.1
ProteinModelPortal:E2RTM4 Ensembl:ENSCAFT00000006682 GeneID:487097
KEGG:cfa:487097 Uniprot:E2RTM4
Length = 326
Score = 114 (45.2 bits), Expect = 0.00084, P = 0.00084
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDK 167
L R D ++ L P + K
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFK 88
>UNIPROTKB|P35226 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0033092
"positive regulation of immature T cell proliferation in thymus"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0071535 "RING-like zinc finger domain
binding" evidence=IPI] [GO:0000151 "ubiquitin ligase complex"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0051443 "positive regulation of ubiquitin-protein ligase
activity" evidence=IDA] [GO:0030097 "hemopoiesis" evidence=IEP]
[GO:0031519 "PcG protein complex" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0035102 "PRC1 complex" evidence=IDA]
[GO:0007379 "segment specification" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=IMP] [GO:0010468 "regulation of
gene expression" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0043066 GO:GO:0007420 GO:GO:0005730 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0001701 GO:GO:0016573
GO:GO:0006351 GO:GO:0003682 GO:GO:0000122 EMBL:CH471072
GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030097
GO:GO:0007379 GO:GO:0004842 GO:GO:0006959 GO:GO:0048146
GO:GO:0048704 GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907
GO:GO:0051443 eggNOG:NOG304672 HOGENOM:HOG000231945
HOVERGEN:HBG052826 KO:K11459 OrthoDB:EOG4KSPKG CTD:648 OMA:SNHQSSF
GO:GO:0035102 GO:GO:0016574 GO:GO:0033092 GO:GO:0021903
GO:GO:0048103 EMBL:L13689 EMBL:AK313235 EMBL:AL158211 EMBL:BC011652
EMBL:AH004292 IPI:IPI00017299 PIR:I54339 RefSeq:NP_001190991.1
RefSeq:NP_005171.4 UniGene:Hs.380403 UniGene:Hs.731287 PDB:2H0D
PDB:3RPG PDBsum:2H0D PDBsum:3RPG ProteinModelPortal:P35226
SMR:P35226 DIP:DIP-41879N IntAct:P35226 MINT:MINT-158260
STRING:P35226 PhosphoSite:P35226 DMDM:22258801 PaxDb:P35226
PRIDE:P35226 DNASU:648 Ensembl:ENST00000376663 GeneID:100532731
GeneID:648 KEGG:hsa:100532731 KEGG:hsa:648 UCSC:uc001irh.3
CTD:100532731 GeneCards:GC10P022605 HGNC:HGNC:1066 HPA:CAB011120
HPA:HPA030472 MIM:164831 neXtProt:NX_P35226 PharmGKB:PA25376
InParanoid:P35226 PhylomeDB:P35226 EvolutionaryTrace:P35226
NextBio:2628 ArrayExpress:P35226 Bgee:P35226 CleanEx:HS_BMI1
Genevestigator:P35226 GermOnline:ENSG00000168283 Uniprot:P35226
Length = 326
Score = 114 (45.2 bits), Expect = 0.00084, P = 0.00084
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDK 167
L R D ++ L P + K
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFK 88
>UNIPROTKB|F2Z5D1 [details] [associations]
symbol:BMI1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] [GO:0051443 "positive regulation of ubiquitin-protein
ligase activity" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0048146 "positive
regulation of fibroblast proliferation" evidence=IEA] [GO:0048103
"somatic stem cell division" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0035102 "PRC1
complex" evidence=IEA] [GO:0033092 "positive regulation of immature
T cell proliferation in thymus" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0030097
"hemopoiesis" evidence=IEA] [GO:0021903 "rostrocaudal neural tube
patterning" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0016574 "histone ubiquitination" evidence=IEA] [GO:0016573
"histone acetylation" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0043066 GO:GO:0007420
GO:GO:0005730 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0001701 GO:GO:0016573 GO:GO:0003682 GO:GO:0000122
GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030097
GO:GO:0004842 GO:GO:0006959 GO:GO:0048146 GO:GO:0048704
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0051443
GeneTree:ENSGT00550000074463 OMA:SNHQSSF GO:GO:0035102
GO:GO:0016574 GO:GO:0033092 GO:GO:0021903 GO:GO:0048103
EMBL:CU855495 EMBL:JQ012762 Ensembl:ENSSSCT00000012128
Uniprot:F2Z5D1
Length = 326
Score = 114 (45.2 bits), Expect = 0.00084, P = 0.00084
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDK 167
L R D ++ L P + K
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFK 88
>UNIPROTKB|Q5R8L2 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9601
"Pongo abelii" [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0031519 "PcG
protein complex" evidence=ISS] [GO:0051443 "positive regulation of
ubiquitin-protein ligase activity" evidence=ISS] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005737 GO:GO:0043066 GO:GO:0007420
GO:GO:0005730 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0001701 GO:GO:0016573 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030097 GO:GO:0004842 GO:GO:0006959 GO:GO:0048146
GO:GO:0048704 GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907
GO:GO:0051443 GO:GO:0031519 HSSP:P25916
GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826 KO:K11459 CTD:648
OMA:SNHQSSF GO:GO:0035102 GO:GO:0016574 GO:GO:0033092 GO:GO:0021903
GO:GO:0048103 EMBL:CR859740 RefSeq:NP_001126098.1 UniGene:Pab.17470
ProteinModelPortal:Q5R8L2 SMR:Q5R8L2 PRIDE:Q5R8L2
Ensembl:ENSPPYT00000002567 GeneID:100173052 KEGG:pon:100173052
InParanoid:Q5R8L2 Uniprot:Q5R8L2
Length = 326
Score = 114 (45.2 bits), Expect = 0.00084, P = 0.00084
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDK 167
L R D ++ L P + K
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFK 88
>UNIPROTKB|Q9TST0 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9685
"Felis catus" [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0031519 "PcG
protein complex" evidence=ISS] [GO:0051443 "positive regulation of
ubiquitin-protein ligase activity" evidence=ISS] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005737
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151
InterPro:IPR017907 GO:GO:0051443 GO:GO:0031519
GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826 CTD:648
EMBL:AJ132013 RefSeq:NP_001020133.1 ProteinModelPortal:Q9TST0
SMR:Q9TST0 GeneID:554342 KEGG:fca:554342 Uniprot:Q9TST0
Length = 326
Score = 114 (45.2 bits), Expect = 0.00084, P = 0.00084
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDK 167
L R D ++ L P + K
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFK 88
>TAIR|locus:2064392 [details] [associations]
symbol:DRIP2 "DREB2A-interacting protein 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009414 "response to water
deprivation" evidence=IGI] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0009414
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 eggNOG:NOG277991
HOGENOM:HOG000240404 KO:K16277 ProtClustDB:CLSN2688579 EMBL:U93215
EMBL:AY045618 EMBL:BT000505 IPI:IPI00544240 PIR:B84710
RefSeq:NP_565702.1 UniGene:At.14726 ProteinModelPortal:Q94AY3
SMR:Q94AY3 IntAct:Q94AY3 EnsemblPlants:AT2G30580.1 GeneID:817608
KEGG:ath:AT2G30580 TAIR:At2g30580 InParanoid:Q94AY3 OMA:NASHNDV
PhylomeDB:Q94AY3 Genevestigator:Q94AY3 Uniprot:Q94AY3
Length = 420
Score = 116 (45.9 bits), Expect = 0.00088, Sum P(2) = 0.00087
Identities = 29/86 (33%), Positives = 38/86 (44%)
Query: 81 EKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECI-DKAMRLGNNECPACR 139
E D VK + + CP+C ++R T+ ECLH FCR+CI +K CP C
Sbjct: 2 EGDMVAKVKRETVVACMTCPLCDKLLRDATTISECLHTFCRKCIYEKITEDEIESCPVCD 61
Query: 140 THCASR--RSLRDDLNYDALIAALYP 163
LR D L A L+P
Sbjct: 62 IDLGGTPLEKLRPDHILQDLRAKLFP 87
Score = 41 (19.5 bits), Expect = 0.00088, Sum P(2) = 0.00087
Identities = 16/71 (22%), Positives = 30/71 (42%)
Query: 205 RTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSSSADERSTEVR 264
+ PKS SH + + + + + R +L+ N NGD ++ +R+ R
Sbjct: 225 KDPKSELG-NASHNDVQGSKTKTKDHKRKCKLEEEISN---NGDPTTSETATLKRTRRTR 280
Query: 265 PKRRKRWYGAR 275
KR + +R
Sbjct: 281 RKRSSTFGDSR 291
>UNIPROTKB|H3BPZ9 [details] [associations]
symbol:RNF166 "RING finger protein 166" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC138028 HGNC:HGNC:28856 ChiTaRS:RNF166
Ensembl:ENST00000562544 Bgee:H3BPZ9 Uniprot:H3BPZ9
Length = 148
Score = 102 (41.0 bits), Expect = 0.00088, P = 0.00088
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
S + + CPICL + + + C H FC EC+ +++ + CP CR
Sbjct: 4 SGLEAQYTCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSPLCPLCR 52
>UNIPROTKB|I3LJN8 [details] [associations]
symbol:DTX3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00440000035370
Ensembl:ENSSSCT00000029673 OMA:ETSDICE Uniprot:I3LJN8
Length = 337
Score = 114 (45.2 bits), Expect = 0.00090, P = 0.00090
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E CPICLG I+ +T+ +C H FC CI +A+++ CP C
Sbjct: 150 QESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC 192
>UNIPROTKB|H0YAI5 [details] [associations]
symbol:RNF4 "E3 ubiquitin-protein ligase RNF4" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL110117 EMBL:AL645924
EMBL:BX322586 EMBL:CR450722 EMBL:CR545473 HGNC:HGNC:10067
ChiTaRS:RNF4 Ensembl:ENST00000508235 Uniprot:H0YAI5
Length = 106
Score = 93 (37.8 bits), Expect = 0.00091, P = 0.00091
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 97 VQCPICLG----IIRKTRTVM--ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSL 148
V CPIC+ I++ R ++ EC H FC +C+ +++ N CP CR +R L
Sbjct: 46 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKRLL 102
>UNIPROTKB|F1RWB5 [details] [associations]
symbol:F1RWB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104307 EMBL:FP067415
Ensembl:ENSSSCT00000009701 OMA:MEEVANQ Uniprot:F1RWB5
Length = 341
Score = 114 (45.2 bits), Expect = 0.00092, P = 0.00092
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMR--LGNNECPACRTHCASRRS 147
L+ ++ E CPICL +R T +C H FC C+ + G+ CP C HC R S
Sbjct: 7 LAQLQAEASCPICLDYLRDPVTT-DCGHNFCHSCLLQRWEGLQGDFPCPVCLQHCPDR-S 64
Query: 148 LR 149
LR
Sbjct: 65 LR 66
>UNIPROTKB|F1SKF4 [details] [associations]
symbol:DTX3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0007219 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00440000035370
OMA:GPQLCDS EMBL:FP016095 Ensembl:ENSSSCT00000000484 Uniprot:F1SKF4
Length = 346
Score = 114 (45.2 bits), Expect = 0.00094, P = 0.00094
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E CPICLG I+ +T+ +C H FC CI +A+++ CP C
Sbjct: 159 QESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC 201
>UNIPROTKB|C9J060 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00239700 ProteinModelPortal:C9J060 SMR:C9J060 STRING:C9J060
PRIDE:C9J060 Ensembl:ENST00000425490 ArrayExpress:C9J060
Bgee:C9J060 Uniprot:C9J060
Length = 203
Score = 109 (43.4 bits), Expect = 0.00094, P = 0.00094
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMR------LGNNECPACRT 140
VK+ DI KEV CPICL ++ + + ++C H FC+ CI ++ G + CP C+T
Sbjct: 5 VKV-DIEKEVTCPICLELLTEPLS-LDCGHSFCQACITAKIKESVIISRGESSCPVCQT 61
>UNIPROTKB|A7Z074 [details] [associations]
symbol:DTX3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0007219 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG84763 HOGENOM:HOG000007352 KO:K06058
GeneTree:ENSGT00440000035370 CTD:196403 HOVERGEN:HBG045495
OMA:GPQLCDS EMBL:DAAA02013495 EMBL:BC153272 IPI:IPI00693057
RefSeq:NP_001098863.1 UniGene:Bt.56673 STRING:A7Z074
Ensembl:ENSBTAT00000044838 GeneID:524779 KEGG:bta:524779
InParanoid:A7Z074 OrthoDB:EOG4CVG7F NextBio:20874038 Uniprot:A7Z074
Length = 347
Score = 114 (45.2 bits), Expect = 0.00095, P = 0.00095
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E CPICLG I+ +T+ +C H FC CI +A+++ CP C
Sbjct: 160 QESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC 202
>UNIPROTKB|Q8N9I9 [details] [associations]
symbol:DTX3 "Probable E3 ubiquitin-protein ligase DTX3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0007219 EMBL:CH471054
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG84763 HOGENOM:HOG000007352 KO:K06058
EMBL:AY225126 EMBL:AK092085 EMBL:AK094385 EMBL:AK128752
EMBL:BC114441 EMBL:BC114498 EMBL:AL831941 IPI:IPI00148820
IPI:IPI00184064 RefSeq:NP_848597.1 UniGene:Hs.32374
ProteinModelPortal:Q8N9I9 SMR:Q8N9I9 IntAct:Q8N9I9 STRING:Q8N9I9
PhosphoSite:Q8N9I9 DMDM:37077338 PRIDE:Q8N9I9
Ensembl:ENST00000337737 Ensembl:ENST00000548198
Ensembl:ENST00000548478 Ensembl:ENST00000548804
Ensembl:ENST00000551632 GeneID:196403 KEGG:hsa:196403
UCSC:uc001sov.1 CTD:196403 GeneCards:GC12P057998 HGNC:HGNC:24457
MIM:613142 neXtProt:NX_Q8N9I9 PharmGKB:PA134887936
HOVERGEN:HBG045495 InParanoid:Q8N9I9 OMA:GPQLCDS GenomeRNAi:196403
NextBio:89461 ArrayExpress:Q8N9I9 Bgee:Q8N9I9 CleanEx:HS_DTX3
Genevestigator:Q8N9I9 GermOnline:ENSG00000178498 Uniprot:Q8N9I9
Length = 347
Score = 114 (45.2 bits), Expect = 0.00095, P = 0.00095
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E CPICLG I+ +T+ +C H FC CI +A+++ CP C
Sbjct: 160 QESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC 202
>UNIPROTKB|J3QKM8 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000580499
Uniprot:J3QKM8
Length = 142
Score = 100 (40.3 bits), Expect = 0.00096, P = 0.00096
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
CP+C +++ C H FCR+C AMR CP CR + R
Sbjct: 18 CPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVTRR 64
>RGD|1310896 [details] [associations]
symbol:Trim6 "tripartite motif containing 6" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0070206 "protein trimerization" evidence=IEA;ISO]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 RGD:1310896 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070206
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646
OrthoDB:EOG4229JJ KO:K11999 CTD:117854 EMBL:AC113720
IPI:IPI00394064 RefSeq:NP_001163932.1 UniGene:Rn.80076
ProteinModelPortal:D4A3L4 Ensembl:ENSRNOT00000023043 GeneID:293294
KEGG:rno:293294 UCSC:RGD:1310896 NextBio:635769 Uniprot:D4A3L4
Length = 488
Score = 116 (45.9 bits), Expect = 0.00099, P = 0.00099
Identities = 29/78 (37%), Positives = 43/78 (55%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECI----DKAMRL--GNNECPACRTHCA 143
L DIR EV CPICL ++ + ++ +C H FC+ CI D ++ G + CP CRT
Sbjct: 6 LVDIRDEVTCPICLELLTEPLSI-DCGHSFCQACIIGNSDNSVLNPEGKSSCPVCRT-VY 63
Query: 144 SRRSLRDDLNYDALIAAL 161
SLR + + A++ L
Sbjct: 64 QPGSLRPNRHLAAIVKRL 81
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 471 423 0.00084 118 3 11 22 0.42 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 140
No. of states in DFA: 613 (65 KB)
Total size of DFA: 255 KB (2136 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.47u 0.14s 40.61t Elapsed: 00:00:02
Total cpu time: 40.49u 0.14s 40.63t Elapsed: 00:00:02
Start: Tue May 21 11:08:46 2013 End: Tue May 21 11:08:48 2013
WARNINGS ISSUED: 1