BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012092
(471 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224125396|ref|XP_002329795.1| predicted protein [Populus trichocarpa]
gi|222870857|gb|EEF07988.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 299/477 (62%), Positives = 361/477 (75%), Gaps = 45/477 (9%)
Query: 1 MPAQKRSYENATTNNNNNNHIIITPSEVVEAVLDDDGDDTLQRDHSNNLEEQQPPQDSTP 60
MPAQKRSYE +DD Q+DH+NN EQ+ P
Sbjct: 1 MPAQKRSYETLQK--------------------EDDALLRQQQDHTNNNHEQK----QEP 36
Query: 61 AAAADVDGN-ESDRSRSSG---DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECL 116
+ D DG ESDRS+ S + K+E+V+VKLS+IRKEVQCPICLGIIRKTRTVMECL
Sbjct: 37 RSDIDDDGGVESDRSQPSSNINEDVKEEYVVVKLSEIRKEVQCPICLGIIRKTRTVMECL 96
Query: 117 HRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQ 176
HRFCRECIDK+MRLGNNECPACRTHCASRRSLRDD NYDALIAALYPDIDKYEEEELAFQ
Sbjct: 97 HRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFQ 156
Query: 177 DEEAARNKQIQASIAQTFQRQTEALGRKR-TPKSTSAL--RRSHGRYRDTPLRGRRNYRM 233
++E ARNK+IQA+IAQTF RQ EAL RKR T K+T+A+ RR+ R+RD RGRRNYR+
Sbjct: 157 EDEKARNKEIQATIAQTFDRQAEALSRKRSTAKATAAVFARRTPSRFRDAHSRGRRNYRI 216
Query: 234 TELQGSDENDDANGDAGKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDEN 293
ELQGSD+N+DANG GKDSSS DE S EV+PKR +R SAA DG G EN
Sbjct: 217 AELQGSDDNEDANGGGGKDSSSTDEHSAEVKPKRYRRC---------SAAFNADGSGGEN 267
Query: 294 DSEVHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQS 353
DSEV++ES+GAS GLI SERLAWGK G+RSHTR+GS +GSN KNARN+R+SKL DYL++
Sbjct: 268 DSEVNKESVGASAGLISSSERLAWGKNGMRSHTRYGSANGSNVKNARNSRISKLADYLRN 327
Query: 354 LEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYL 413
L+E D++LD++L+LVS DEQR+P LQ+PYLCCRPTLS++ LCQYVA QT+LQA+E+EIYL
Sbjct: 328 LDENDNELDINLMLVSFDEQRVPSLQRPYLCCRPTLSIKSLCQYVAFQTSLQANEVEIYL 387
Query: 414 VKELHSKINLPSSSNSL-----MIDPCKDKLQVLNEQETLTGLQTQNLGHGFLLLAY 465
V++++SK++ S +S +IDPCKDKLQVL + ETL GL+T N HG L+ ++
Sbjct: 388 VQDMNSKLDFSLSMSSPVSRHGIIDPCKDKLQVLEQHETLGGLKTNNCIHGHLVSSF 444
>gi|359483484|ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Vitis
vinifera]
Length = 534
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 300/433 (69%), Positives = 345/433 (79%), Gaps = 17/433 (3%)
Query: 39 DTLQRDHSNNLEEQQPPQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQ 98
D LQR H N+ E PP+D DG ESDRS S +GEKDEFVIVKL++IRKEVQ
Sbjct: 115 DPLQRHHGNHHE---PPEDG--------DGYESDRSPSWSNGEKDEFVIVKLAEIRKEVQ 163
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALI 158
CPICLGIIRKTRTVMECLHRFCRECIDK+MRLGNNECPACRTHCASRRSLRDD NYDALI
Sbjct: 164 CPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI 223
Query: 159 AALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHG 218
AALYPDIDKYE+EELAF +EE RNKQIQASIAQT +RQ+EALGRKRT + +
Sbjct: 224 AALYPDIDKYEQEELAFHEEEKTRNKQIQASIAQTLRRQSEALGRKRT-TAKATAAAFAR 282
Query: 219 RYRDTPLRGRRNYRMTELQGSDENDDANG-DAGKDSSSADERSTEVRPKRRKRWYGARFS 277
R + RGRRNYR T+L GS++++DANG D GKDSSSA++ S EV+PKR +RW G RFS
Sbjct: 283 RSQGNYRRGRRNYRATDLLGSEDDEDANGNDGGKDSSSAEDHSAEVKPKRSRRWGGVRFS 342
Query: 278 QSSSAAAGTDGGGDENDSEVHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGK 337
Q SS AA DGGGDEND E +RE+MGAS GL+G SE LAWGKGG+RSHTR+GSVSG NGK
Sbjct: 343 QPSSGAANADGGGDENDLEPNREAMGASAGLVGNSEILAWGKGGMRSHTRYGSVSGGNGK 402
Query: 338 NARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQY 397
NAR++RLSKLVDYL++L++ DD+LD+HL+LVSLDEQRIP LQ PYLCCRPTLSVRHLCQY
Sbjct: 403 NARSSRLSKLVDYLRNLDQNDDELDIHLMLVSLDEQRIPSLQTPYLCCRPTLSVRHLCQY 462
Query: 398 VAHQTALQASEIEIYLVKELHSKINLPSSSNSLMIDPCKDKLQVLNEQETLTGLQT-QNL 456
VA QT L A E+EI ++KE SK+N SNS DPC D+LQVL QETL L+T +N
Sbjct: 463 VALQTPLLADEVEILVIKEQLSKLN---PSNSSSPDPCSDRLQVLEAQETLAVLKTMRNA 519
Query: 457 GHGFLLLAYQKIL 469
LLLAY++ L
Sbjct: 520 NQSHLLLAYRRKL 532
>gi|297740412|emb|CBI30594.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 301/433 (69%), Positives = 348/433 (80%), Gaps = 17/433 (3%)
Query: 39 DTLQRDHSNNLEEQQPPQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQ 98
D LQR H N+ E PP+D DG ESDRS S +GEKDEFVIVKL++IRKEVQ
Sbjct: 14 DPLQRHHGNHHE---PPEDG--------DGYESDRSPSWSNGEKDEFVIVKLAEIRKEVQ 62
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALI 158
CPICLGIIRKTRTVMECLHRFCRECIDK+MRLGNNECPACRTHCASRRSLRDD NYDALI
Sbjct: 63 CPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI 122
Query: 159 AALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHG 218
AALYPDIDKYE+EELAF +EE RNKQIQASIAQT +RQ+EALGRKRT + +
Sbjct: 123 AALYPDIDKYEQEELAFHEEEKTRNKQIQASIAQTLRRQSEALGRKRT-TAKATAAAFAR 181
Query: 219 RYRDTPLRGRRNYRMTELQGSDENDDANG-DAGKDSSSADERSTEVRPKRRKRWYGARFS 277
R + RGRRNYR T+L GS++++DANG D GKDSSSA++ S EV+PKR +RW G RFS
Sbjct: 182 RSQGNYRRGRRNYRATDLLGSEDDEDANGNDGGKDSSSAEDHSAEVKPKRSRRWGGVRFS 241
Query: 278 QSSSAAAGTDGGGDENDSEVHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGK 337
Q SS AA DGGGDEND E +RE+MGAS GL+G SE LAWGKGG+RSHTR+GSVSG NGK
Sbjct: 242 QPSSGAANADGGGDENDLEPNREAMGASAGLVGNSEILAWGKGGMRSHTRYGSVSGGNGK 301
Query: 338 NARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQY 397
NAR++RLSKLVDYL++L++ DD+LD+HL+LVSLDEQRIP LQ PYLCCRPTLSVRHLCQY
Sbjct: 302 NARSSRLSKLVDYLRNLDQNDDELDIHLMLVSLDEQRIPSLQTPYLCCRPTLSVRHLCQY 361
Query: 398 VAHQTALQASEIEIYLVKELHSKINLPSSSNSLMIDPCKDKLQVLNEQETLTGLQT-QNL 456
VA QT L A E+EI ++KE SK+N PS+S+S DPC D+LQVL QETL L+T +N
Sbjct: 362 VALQTPLLADEVEILVIKEQLSKLN-PSNSSS--PDPCSDRLQVLEAQETLAVLKTMRNA 418
Query: 457 GHGFLLLAYQKIL 469
LLLAY++ L
Sbjct: 419 NQSHLLLAYRRKL 431
>gi|224079177|ref|XP_002305782.1| predicted protein [Populus trichocarpa]
gi|222848746|gb|EEE86293.1| predicted protein [Populus trichocarpa]
Length = 463
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 301/479 (62%), Positives = 362/479 (75%), Gaps = 30/479 (6%)
Query: 1 MPAQKRSYENATTNNNNNNHIIITPSEVVEAVLDDDGDDTLQRDHSNNLEEQQPPQDSTP 60
MPAQKRS+E ++ +A++ D T +++NN E++Q P D
Sbjct: 1 MPAQKRSHETLQKEDD-------------DALIQQQQDHTNNNNNNNNHEQKQQPHDDID 47
Query: 61 AAAADVDGNESDRSRSS----GDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECL 116
G+E S + K+E+V+VKLS+IRKEVQCPICLGIIRKTRTVMECL
Sbjct: 48 DDGGGGGGDEQSDRSQSSSSINEDVKEEYVVVKLSEIRKEVQCPICLGIIRKTRTVMECL 107
Query: 117 HRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQ 176
HRFCRECIDK+MRLGNNECPACRTHCASRRSLRDD NYDALI+ALYPDIDKYEEEELAFQ
Sbjct: 108 HRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISALYPDIDKYEEEELAFQ 167
Query: 177 DEEAARNKQIQASIAQTFQRQTEALGRKRTPKSTSA---LRRSHGRYRDTPLRGRRNYRM 233
+EE ARNKQIQA+IAQTF RQ EAL RK+T +A RR+ R+RD RGRRNYRM
Sbjct: 168 EEEKARNKQIQATIAQTFHRQAEALSRKKTTAKVTAAAFARRTPSRFRDAHSRGRRNYRM 227
Query: 234 TELQGSDENDDANGDAGKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDEN 293
QGSD+N+DANGD GKDSSSADE S EV+PKR K+W GAR SAA DGGGDEN
Sbjct: 228 AGFQGSDDNEDANGDGGKDSSSADEHSAEVKPKRCKKWAGAR-----SAAVNADGGGDEN 282
Query: 294 DSEVHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQS 353
DSEV++ES+G S GL+G SERLAWGK G+RSHTR+GS +GSN KNAR++R+SKL DYL++
Sbjct: 283 DSEVNKESVGGSSGLVGSSERLAWGKNGMRSHTRYGSANGSNVKNARSSRISKLADYLRN 342
Query: 354 LEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYL 413
LE D++LD++L+LVS DEQR+P LQ+PYLCCRPTLS+ LCQYVA QT+LQA+E+EIYL
Sbjct: 343 LEGNDNELDINLMLVSFDEQRVPSLQRPYLCCRPTLSINKLCQYVAFQTSLQANEVEIYL 402
Query: 414 VKELHSKINLPSS-----SNSLMIDPCKDKLQVLNEQETLTGLQTQNLGHGFLLLAYQK 467
V+E++SK++ S S +IDPCKDKLQVL EQETL L+T N HG+LLLAY+K
Sbjct: 403 VREMNSKVDFSISMSTPISKPGIIDPCKDKLQVLEEQETLGRLKTNNFIHGYLLLAYRK 461
>gi|255536761|ref|XP_002509447.1| ring finger protein, putative [Ricinus communis]
gi|223549346|gb|EEF50834.1| ring finger protein, putative [Ricinus communis]
Length = 418
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 298/479 (62%), Positives = 337/479 (70%), Gaps = 72/479 (15%)
Query: 1 MPAQKRSYENATTNNNNNNHIIITPSEVVEAVLDDDGDDTLQRDHSNNLEEQQPPQDSTP 60
MPAQKRS+++ N + D Q DH N EQQ P
Sbjct: 1 MPAQKRSHDSTHQNGH---------------------DLPQQEDHPGNHHEQQLPLVGDG 39
Query: 61 AAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFC 120
AAAD GIIRKTRTVMECLHRFC
Sbjct: 40 RAAAD--------------------------------------GIIRKTRTVMECLHRFC 61
Query: 121 RECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEA 180
RECIDK+MRLGNNECPACRTHCASRRSLRDD NYDALIAALYPDIDKYEEEELAF +EE
Sbjct: 62 RECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFHEEEK 121
Query: 181 ARNKQIQASIAQTFQRQTEALGRKRT-PKSTSA--LRRSHGRYRDTPLRGRRNYRMTELQ 237
ARNKQIQASI QT +RQ EALGRKRT K+T A RR+ GRYRD RGRRNYR +LQ
Sbjct: 122 ARNKQIQASITQTIRRQAEALGRKRTTAKATVAPFARRTQGRYRDAHSRGRRNYRTADLQ 181
Query: 238 GSDENDDANGDAGKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEV 297
GSDE +D NGD GKDSSSA+E S EV+PKR KRW GAR S AA DGGGDENDSEV
Sbjct: 182 GSDEIEDVNGDGGKDSSSAEEHSAEVKPKRIKRWGGAR-----SGAANADGGGDENDSEV 236
Query: 298 HRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEK 357
+RESMG+S GL+GPSERLAWG+GGIRSHTR+GS + NGKNARN+R+ KL DYL++LEE
Sbjct: 237 NRESMGSSAGLVGPSERLAWGRGGIRSHTRYGSANAGNGKNARNSRIFKLADYLRNLEEN 296
Query: 358 DDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKEL 417
+++LD+ L+LVS DE++IP LQ+PYLCCRPTLSV+HL QYVA QTALQ EIEIYLVKEL
Sbjct: 297 NNELDICLMLVSFDEEKIPSLQRPYLCCRPTLSVKHLRQYVALQTALQTEEIEIYLVKEL 356
Query: 418 HSKIN-LPSSSNSL----MIDPCKDKLQVLNEQETLTGLQTQNLGHGFLLLAYQKILLN 471
+SK N LPS+S S+ +IDP KDKLQVL EQET+ GL+T N G +LLAYQK L N
Sbjct: 357 NSKFNSLPSTSISISKPGIIDPRKDKLQVLEEQETVGGLKTNNFTQGHVLLAYQKRLWN 415
>gi|302143319|emb|CBI21880.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 263/421 (62%), Positives = 311/421 (73%), Gaps = 15/421 (3%)
Query: 62 AAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCR 121
++D +SD + SS EK EFV V L DIRK+VQCPICLGII+KTRTVMECLHRFCR
Sbjct: 144 GSSDFYFPDSDENPSSSTEEKPEFVFVGLPDIRKDVQCPICLGIIKKTRTVMECLHRFCR 203
Query: 122 ECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAA 181
ECIDK+MRLGNNECPACRTHCASRRSLRDD NYDALIAALYPDIDKYEEEELAF +EE
Sbjct: 204 ECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFHEEEQT 263
Query: 182 RNKQIQASIAQTFQRQTEALGRKRTPKSTSA---LRRSHGRYRDTPLRGRRNYRMTELQG 238
RNKQIQASIAQ QRQ+EAL RKRT A + RS YR+ R R+N R ++LQG
Sbjct: 264 RNKQIQASIAQILQRQSEALNRKRTLGKDIAGPFMTRSQRNYRNAYSRRRKNGRGSDLQG 323
Query: 239 S-DENDDANGDAGKDSSSADERSTEVRPKRRKRWYGARFSQ-SSSAAAGTDGGGDENDSE 296
S D D+ + D GK SSSA+ERSTEV+ +R KR G R Q SSS+ A +DGG END E
Sbjct: 324 SDDNEDENDNDGGKGSSSAEERSTEVKRRRYKRRAGIRLIQPSSSSVANSDGGCIENDLE 383
Query: 297 VHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEE 356
V+RES G S GL+ E LAWG+GG RSHTRHGS SG N K+AR+ RLSKLVDYL+SL E
Sbjct: 384 VNRESRGFSPGLVWNPEMLAWGRGGARSHTRHGSSSGCNHKSARSTRLSKLVDYLRSLGE 443
Query: 357 KDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKE 416
D++LD+HL+L+SLD++ P LQ+PYLCCRPTLSVRHLC+YVA QT L+A E+EI +VK
Sbjct: 444 NDNELDVHLMLISLDKESTPSLQEPYLCCRPTLSVRHLCEYVALQTPLRAEEVEILVVKG 503
Query: 417 LHSKIN-LPSSSNS--------LMIDPCKDKLQVLNEQETLTGLQTQNLG-HGFLLLAYQ 466
H+ P+ S S ++IDP KD+LQ+L QETL GLQ L+LAY+
Sbjct: 504 CHNDYQPFPNPSTSVDDLNPDPIVIDPSKDELQILEGQETLVGLQANGTSCRNQLVLAYR 563
Query: 467 K 467
+
Sbjct: 564 Q 564
>gi|359485403|ref|XP_002274885.2| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Vitis
vinifera]
Length = 412
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 255/398 (64%), Positives = 299/398 (75%), Gaps = 15/398 (3%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCAS 144
FV V L DIRK+VQCPICLGII+KTRTVMECLHRFCRECIDK+MRLGNNECPACRTHCAS
Sbjct: 11 FVFVGLPDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 70
Query: 145 RRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRK 204
RRSLRDD NYDALIAALYPDIDKYEEEELAF +EE RNKQIQASIAQ QRQ+EAL RK
Sbjct: 71 RRSLRDDPNYDALIAALYPDIDKYEEEELAFHEEEQTRNKQIQASIAQILQRQSEALNRK 130
Query: 205 RTPKSTSA---LRRSHGRYRDTPLRGRRNYRMTELQGS-DENDDANGDAGKDSSSADERS 260
RT A + RS YR+ R R+N R ++LQGS D D+ + D GK SSSA+ERS
Sbjct: 131 RTLGKDIAGPFMTRSQRNYRNAYSRRRKNGRGSDLQGSDDNEDENDNDGGKGSSSAEERS 190
Query: 261 TEVRPKRRKRWYGARFSQ-SSSAAAGTDGGGDENDSEVHRESMGASVGLIGPSERLAWGK 319
TEV+ +R KR G R Q SSS+ A +DGG END EV+RES G S GL+ E LAWG+
Sbjct: 191 TEVKRRRYKRRAGIRLIQPSSSSVANSDGGCIENDLEVNRESRGFSPGLVWNPEMLAWGR 250
Query: 320 GGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQ 379
GG RSHTRHGS SG N K+AR+ RLSKLVDYL+SL E D++LD+HL+L+SLD++ P LQ
Sbjct: 251 GGARSHTRHGSSSGCNHKSARSTRLSKLVDYLRSLGENDNELDVHLMLISLDKESTPSLQ 310
Query: 380 QPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELHSKIN-LPSSSNS--------L 430
+PYLCCRPTLSVRHLC+YVA QT L+A E+EI +VK H+ P+ S S +
Sbjct: 311 EPYLCCRPTLSVRHLCEYVALQTPLRAEEVEILVVKGCHNDYQPFPNPSTSVDDLNPDPI 370
Query: 431 MIDPCKDKLQVLNEQETLTGLQTQNLG-HGFLLLAYQK 467
+IDP KD+LQ+L QETL GLQ L+LAY++
Sbjct: 371 VIDPSKDELQILEGQETLVGLQANGTSCRNQLVLAYRQ 408
>gi|224133478|ref|XP_002328052.1| predicted protein [Populus trichocarpa]
gi|222837461|gb|EEE75840.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/391 (61%), Positives = 291/391 (74%), Gaps = 14/391 (3%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D EK EFV V+L DIRK+VQCPICLGII+KTRTVMECLHRFCRECIDK+MR+GNNECPAC
Sbjct: 113 DEEKPEFVFVELPDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRMGNNECPAC 172
Query: 139 RTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQT 198
RTHCASRRSLRDD NYDALIAALYPDIDKYEEEELAF +EE RNKQIQASIAQ QRQ+
Sbjct: 173 RTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFHEEEMTRNKQIQASIAQIIQRQS 232
Query: 199 EALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGD-AGKDSSSAD 257
EAL ++RT S R RRN R ++ QGS++ +D N D GKDSSSAD
Sbjct: 233 EALVKRRTMGKESTFMTRTRRTITR---RRRNSRSSDFQGSEDIEDENDDNIGKDSSSAD 289
Query: 258 ERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLIGPSERLAW 317
ERSTEVR +R KR + SQ SS+A ++GGG END + +RE+ G S GL +E LAW
Sbjct: 290 ERSTEVRHRRPKRRWP---SQPSSSAVNSEGGGAENDLDSNRENRGLSPGLAWNTEMLAW 346
Query: 318 GKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPG 377
G+GG RSHTR+G+ SG N KN+RN RLSKLV+YL+SL+EK+D+LD+HL L+SL Q P
Sbjct: 347 GRGGTRSHTRYGNPSGCNNKNSRNTRLSKLVEYLRSLDEKNDELDIHLKLISLGNQSTPS 406
Query: 378 LQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSNSLMIDPCKD 437
LQQPYLCCRP+LSV+HLC+YVAHQT LQA E+E+ L+K ++ S + D
Sbjct: 407 LQQPYLCCRPSLSVKHLCEYVAHQTTLQAEEVELLLIKGKAENLSAKHSQIPM------D 460
Query: 438 KLQVLNEQETLTGLQTQ-NLGHGFLLLAYQK 467
+LQ+L QET+ GL+ + L+LAY++
Sbjct: 461 ELQILKGQETVAGLKASCSSSRDHLILAYRQ 491
>gi|147774461|emb|CAN59794.1| hypothetical protein VITISV_001902 [Vitis vinifera]
Length = 636
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 258/474 (54%), Positives = 305/474 (64%), Gaps = 92/474 (19%)
Query: 21 IIITPSEVVEAVLDDDGDDTLQRDHSNNLEEQQPPQDSTPAAAADVDGNESDRSRSSGDG 80
+++ + D D LQR H N+ E PP+D DG ESDRS S +G
Sbjct: 188 VLVAAMPAQKRAFDAMEGDPLQRHHGNHHE---PPEDG--------DGYESDRSPSWSNG 236
Query: 81 EKDEFVIVKLSDIRKEVQCPICLGIIR---------------------------KTRTVM 113
EKDEFVIVKL++IRKEVQCPICLG ++ KTRTVM
Sbjct: 237 EKDEFVIVKLAEIRKEVQCPICLGHLQETARCMIAHHLKEFVXAYDIACMGSSGKTRTVM 296
Query: 114 ECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEE-- 171
ECLHRFCRECIDK+MRLGNNECPACRTHCASRRSLRDD NYDALIAALYPDIDKYE+E
Sbjct: 297 ECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEQEVY 356
Query: 172 -----------ELAFQDEEAARNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRY 220
ELAF +EE RNKQIQASIAQT +RQ+EALGRKRT + + R
Sbjct: 357 LTNSMPSQIGKELAFHEEEKTRNKQIQASIAQTLRRQSEALGRKRT-TAKATAAAFARRS 415
Query: 221 RDTPLRGRRNYRMTELQGSDENDDANG-DAGKDSSSADERSTEVRPKRRKRWYGARFSQS 279
+ RGRRNYR T+L GS++++DANG D GKDSSSA++ S EV+PKR +RW G RFSQ
Sbjct: 416 QGNYRRGRRNYRATDLLGSEDDEDANGNDGGKDSSSAEDHSAEVKPKRSRRWGGVRFSQP 475
Query: 280 SSAAAGTDGGGDENDSEVHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNA 339
SS +A DGGGDEND E +RE+MGAS GL+G SE LAWGKGG+RSHTR+GSVSG NGKNA
Sbjct: 476 SSGSANADGGGDENDLEANREAMGASAGLVGNSEILAWGKGGMRSHTRYGSVSGGNGKNA 535
Query: 340 RNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVA 399
R++RLSKLVDYL++L++ DD +YVA
Sbjct: 536 RSSRLSKLVDYLRNLDQNDD------------------------------------EYVA 559
Query: 400 HQTALQASEIEIYLVKELHSKINLPSSSNSLMIDPCKDKLQVLNEQETLTGLQT 453
QT L A E+EI ++KE SK+N SNS DPC D+LQVL QETL L+T
Sbjct: 560 LQTPLLADEVEILVIKEQLSKLN---PSNSSSPDPCSDRLQVLEAQETLAVLKT 610
>gi|449434332|ref|XP_004134950.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Cucumis sativus]
gi|449479584|ref|XP_004155643.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Cucumis sativus]
Length = 427
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/395 (59%), Positives = 297/395 (75%), Gaps = 22/395 (5%)
Query: 80 GEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
G++DEF+ VKLSDIRKEVQCPICLGII+KTRTVMECLHRFCRECIDK+MRLGN ECPACR
Sbjct: 46 GDEDEFIAVKLSDIRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNKECPACR 105
Query: 140 THCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTE 199
THCASRRSLRDD NYD LIA LYPDI+KYEEEELAFQ+EE ARNKQIQ SIAQT QRQTE
Sbjct: 106 THCASRRSLRDDPNYDTLIAVLYPDIEKYEEEELAFQEEEKARNKQIQTSIAQTLQRQTE 165
Query: 200 ALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYR-MTELQGSDENDDANG-DAGKDSSSAD 257
+LGRKR+ S R RG ++++ E DEN+D N D K+SSSAD
Sbjct: 166 SLGRKRSKPS-----------RRLSSRGPKSFQNHIESLCFDENEDENDYDVSKNSSSAD 214
Query: 258 ERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGD--ENDSEVHRESMGASVGLIGPSERL 315
ER + RPKR +R RFSQSSSA G E++ EV++E +GAS+GL+G SE+L
Sbjct: 215 ER-MDTRPKRPRRCGPVRFSQSSSATGADGADGGGIEHEYEVNKEKVGASLGLVGSSEKL 273
Query: 316 AWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEE-KDDQLDMHLVLVSLDEQR 374
+WGKGGIRSHTR+G +G GK +RNNR++KL DY+++ E +++LD+H++LVS+D +
Sbjct: 274 SWGKGGIRSHTRYGGTNGGAGKISRNNRIAKLSDYVRNSENVSEEELDIHVLLVSMD-RT 332
Query: 375 IPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSNSLMIDP 434
IP LQ+PY+CCRP++ + HL QYVA +T+L +EI + KEL K++ PS+S + +P
Sbjct: 333 IPALQRPYICCRPSVMIGHLSQYVALETSLSVDVVEICVAKELQVKLD-PSTSEATK-NP 390
Query: 435 CKDKLQVLNEQETLTG--LQTQNLGHGFLLLAYQK 467
CK+ +Q+LNEQETL+ L+ L G+LLLAY+K
Sbjct: 391 CKESVQILNEQETLSTAKLKAHRLACGYLLLAYKK 425
>gi|449463098|ref|XP_004149271.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Cucumis sativus]
Length = 495
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 228/413 (55%), Positives = 297/413 (71%), Gaps = 16/413 (3%)
Query: 70 ESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMR 129
+S+ ++SS EK EF+ V+LS IRK+VQCPICLGII+KTRTVMECLHRFCRECIDK+MR
Sbjct: 80 DSEGTQSSSSEEKPEFIFVELSGIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMR 139
Query: 130 LGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQAS 189
LGNNECPACRTHCASRRSLRDD NYDALIAALYPDIDKYEEEEL F +EE RNKQIQ S
Sbjct: 140 LGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELTFHEEERNRNKQIQES 199
Query: 190 IAQTFQRQTEALGRKRTPKSTSA---LRRSHGRYRDTPLRGRRNYRMTELQGSDENDDAN 246
IAQ FQRQ+EAL +KR +A L RS +R+ LR R+N R E+ G ++NDD +
Sbjct: 200 IAQIFQRQSEALSKKRILGKDTAGVILTRSRRNHRNVHLR-RQNGRGDEVSGYEDNDDDD 258
Query: 247 GDA-GKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGD--ENDSEVHRESMG 303
+ GKDSSSADER TEVR +R+KR R SQ SS+ A D G E+D ++ RE+
Sbjct: 259 DNNEGKDSSSADERFTEVRQRRKKRHPTVRSSQPSSSIANIDSGDGCAESDLDMSRENRT 318
Query: 304 ASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDM 363
S GL+ +E L WG+GG+RS++RHGS GS K++R++RL KL YL+ LEE +++LD+
Sbjct: 319 VSPGLVLNTEMLGWGRGGVRSNSRHGSAGGSGNKSSRSSRLMKLAKYLRGLEENNNELDV 378
Query: 364 HLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVK---ELHSK 420
HL+L+S+D++ P LQQP+L CRP+L+V+HL +YV+ +T LQA ++EI +K ++
Sbjct: 379 HLLLISVDKESTPSLQQPHLYCRPSLTVKHLREYVSRKTPLQADDVEILSLKGRPRTSNE 438
Query: 421 INLPSSS-----NSLMIDPCKDKLQVLNEQETLTGLQTQ-NLGHGFLLLAYQK 467
+ PS+S SL+ DP K +LQ L + L GLQ+ L+L Y++
Sbjct: 439 QSTPSASISIDGMSLVFDPLKYELQSLEGEIFLAGLQSDCTYSRDLLILGYRR 491
>gi|111183164|gb|ABH07901.1| putative zinc finger protein [Solanum lycopersicum]
Length = 433
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/376 (59%), Positives = 275/376 (73%), Gaps = 20/376 (5%)
Query: 104 GIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYP 163
GIIRKTRTVMECLHRFCRECIDK+MR+GNNECPACRTHCASRRSLRDD NYDALIA LYP
Sbjct: 42 GIIRKTRTVMECLHRFCRECIDKSMRMGNNECPACRTHCASRRSLRDDPNYDALIAFLYP 101
Query: 164 DIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDT 223
DIDK+EEEE AF +E+ A NKQIQASIAQT QRQ+EALGRKR+ ++ + RRS G YR+
Sbjct: 102 DIDKFEEEEFAFHEEDKALNKQIQASIAQTSQRQSEALGRKRSARAAAFTRRSQGNYRN- 160
Query: 224 PLRGRRNYRMTELQGSDENDDANGDAGKDSSSADERSTEVRPKRRKRWYGARFSQSSSAA 283
LRGRRNY+ E SDE +D N D GKDSSSADERS EV+PKR+K+ G R SQ+S+A+
Sbjct: 161 -LRGRRNYQGAEHHISDEEEDGNHDVGKDSSSADERSIEVKPKRQKKRAG-RPSQASAAS 218
Query: 284 AGTDGGGDENDSEVHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNR 343
+END+E ++ES GA GLI SE LAWGKGG+RS+ RHG + G GK +RN+R
Sbjct: 219 -------EENDAETNQESFGACSGLIRCSEILAWGKGGMRSNNRHGGLGGGIGKVSRNSR 271
Query: 344 LSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTA 403
+SKL+ L +E + +LD L+LVS E+ IP LQ+PYL C+PT+ V+HL QYVA QT+
Sbjct: 272 VSKLIASLSRSDEYEGKLDARLMLVSFSEEDIPSLQRPYLSCQPTMEVKHLRQYVAQQTS 331
Query: 404 LQASEIEIYLVKELHSKINLPSSSNSLMI------DPCKDKLQVLNEQETLTGLQ-TQNL 456
++ EI+I L+KE + N PSSS+ + I DP K ++Q + E +TL +Q T L
Sbjct: 332 IEVGEIDIVLIKEKNPTDN-PSSSDIMAISKPIVGDPSKAEIQTVEEHQTLGEIQETFGL 390
Query: 457 GHGFLLL--AYQKILL 470
LL+ Y KI L
Sbjct: 391 NQRNLLMDCRYSKIWL 406
>gi|356542973|ref|XP_003539938.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Glycine max]
Length = 433
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 241/476 (50%), Positives = 313/476 (65%), Gaps = 54/476 (11%)
Query: 1 MPAQKRSYENATTNNNNNNHIIITPSEVVEAVLDDDGDDTLQRDHSNNLEEQQPPQDSTP 60
MPAQKRS+ +A N+++ H E E D+ D PP+D
Sbjct: 1 MPAQKRSFPDAP--NDHHRHAKYHHQEEEEEEEDNYKSD------------DSPPED--- 43
Query: 61 AAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFC 120
K E+V V+L +IRKEVQCPICLGII+KTRTVMECLHRFC
Sbjct: 44 ---------------------KSEYVFVELLEIRKEVQCPICLGIIKKTRTVMECLHRFC 82
Query: 121 RECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEA 180
RECIDK+MRLGNNECPACRTHCASRRSLRDD NYDALIAALYP+I+KYE EEL F +E+
Sbjct: 83 RECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPNIEKYEIEELQFCEEDK 142
Query: 181 ARNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSD 240
RNKQIQASIA+ QRQ+EAL ++R S + RS ++ + RR ++ + QGS+
Sbjct: 143 NRNKQIQASIAKVAQRQSEALVKRRRDTPGSFVTRSQRNQQN--VLSRRQNQVIDNQGSE 200
Query: 241 ENDDANGDAGKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRE 300
+N+D N + KDSSS DER TE+R +RRKR R SQ SS+ A DGG E+D ++
Sbjct: 201 DNEDENDNNEKDSSSTDERCTELRQRRRKRQTRGRPSQPSSSTASPDGGCIESDMDIRIS 260
Query: 301 SMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQ 360
S S ++L WG GG RSHTRHGS +GSN K++R++R++KLVDYL+SL E D+
Sbjct: 261 SRPVS-----KPQKLTWGGGGFRSHTRHGSGNGSNSKSSRSSRMAKLVDYLRSLNENTDE 315
Query: 361 LDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELHSK 420
LD+HL+L+SLD+Q P LQQP+LCCRPTLSV+HLC+YVAHQT L E+EI VK S
Sbjct: 316 LDVHLILLSLDKQSTPSLQQPHLCCRPTLSVKHLCEYVAHQTPLPVEEVEILAVKGCCST 375
Query: 421 I-----NLPSSSN---SLMIDPCKDKLQVLNEQETLTGLQTQNLG-HGFLLLAYQK 467
+ + SSS+ +L+IDP KD+L+ L E+L G++++ + L+LAY++
Sbjct: 376 VCDKSFDETSSSDELTTLVIDPSKDELETLQGHESLAGIKSKCISKREHLILAYRR 431
>gi|356515162|ref|XP_003526270.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Glycine max]
Length = 455
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 227/404 (56%), Positives = 295/404 (73%), Gaps = 16/404 (3%)
Query: 73 RSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGN 132
+S S +K E+V V+L +IRKEVQCPICLGII+KTRTVMECLHRFCRECIDK+MRLGN
Sbjct: 57 KSDDSPPEDKSEYVFVELLEIRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN 116
Query: 133 NECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQ 192
NECPACRTHCASRRSLRDD NYDALIAALYP+I+KYE+EEL F++E+ RNKQIQASIA+
Sbjct: 117 NECPACRTHCASRRSLRDDPNYDALIAALYPNIEKYEQEELEFREEDKNRNKQIQASIAK 176
Query: 193 TFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKD 252
QRQ+EAL ++R S + RS R+ + RR + + QGS++N++ N + KD
Sbjct: 177 VVQRQSEALVKRRRDTPGSFVTRSQRNQRN--VLSRRQNQGMDNQGSEDNEEENDNNEKD 234
Query: 253 SSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLIGPS 312
SSS DER TE+R +RRKR R SQ SS+ A DGG E+D ++ S L+
Sbjct: 235 SSSTDERCTELRQRRRKRRTRGRPSQPSSSTASPDGGCIESDMDIR-----ISSRLVSKP 289
Query: 313 ERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDE 372
++L WG+GG RSHTRHGS +GSN K++R++RL+KLVDYL SL E D+LD+HL+L+SLD+
Sbjct: 290 QKLTWGRGGFRSHTRHGSGNGSNSKSSRSSRLAKLVDYLHSLNENTDELDVHLILLSLDK 349
Query: 373 QRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELHSKI-----NLPSSS 427
Q P LQQP+LCCRPTLSV+HLC+YVAHQT L E+EI VK S + + SSS
Sbjct: 350 QITPSLQQPHLCCRPTLSVKHLCEYVAHQTPLLVEEVEILAVKGCCSTVCDKSFDETSSS 409
Query: 428 N---SLMIDPCKDKLQVLNEQETLTGLQTQNLG-HGFLLLAYQK 467
+ +L+IDP KD+L+ L E+L G++++ + L+LAY++
Sbjct: 410 DELTTLVIDPSKDELETLQGHESLAGIKSKCISKREHLILAYRR 453
>gi|356542160|ref|XP_003539538.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Glycine max]
Length = 500
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 238/439 (54%), Positives = 308/439 (70%), Gaps = 41/439 (9%)
Query: 45 HSNNLEEQQPPQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLG 104
H NN +E+ PQDS D + SSG EK EFV V+L +IRK+VQCPICLG
Sbjct: 83 HDNNDKEK--PQDS-------------DETPSSGSEEKPEFVYVELLEIRKDVQCPICLG 127
Query: 105 IIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPD 164
II+KTRTVMECLHRFCRECIDK+MRLGNNECPACRTHCASRRSLRDD NYDALIAALYPD
Sbjct: 128 IIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPD 187
Query: 165 IDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTP 224
I+KYE+EEL F++EE RNKQIQASIA+ QRQ+EAL ++R + + G + P
Sbjct: 188 IEKYEQEELEFREEEKNRNKQIQASIAKVVQRQSEALVKRR--------KDTPGAFVTRP 239
Query: 225 LRGRRNY---RMTE-LQGSDENDDANGDAGKDSSSADERSTEVRPKRRKRWYGARFSQSS 280
R +RN R T+ ++GS++N++ N + KDSSSADERSTE R +RRKRW R SQ S
Sbjct: 240 QRNQRNIHSRRQTQAIEGSEDNEEENDNNEKDSSSADERSTEHRQRRRKRWARVRPSQPS 299
Query: 281 SAAAGTDGGGDENDSEVHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNAR 340
S+ A DGG +++D ++ +E+ G S + +L WG+GG RS+TRHGS GSN K++R
Sbjct: 300 SSMASPDGGCNDSDMDISKENRGISRQ-VSKHGKLTWGRGGFRSNTRHGSGGGSNNKSSR 358
Query: 341 NNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAH 400
++RLSK VD+L++L+E D+ D+HL+LVSLD+ P LQQPYLCCRPTLSV+HL ++VA
Sbjct: 359 SSRLSKFVDHLRNLDENTDEFDVHLMLVSLDQLSTPSLQQPYLCCRPTLSVKHLYEHVAR 418
Query: 401 QTALQASEIEIYLVKELHSKINLPSSSN-----------SLMIDPCKDKLQVLNEQETLT 449
QT L IEI VK S N S++ L+IDP KD+L++L ETL
Sbjct: 419 QTPLPVEGIEIVAVKGCCS-TNCDKSADENSALAYDELSKLVIDPHKDELEILQGHETLA 477
Query: 450 GLQTQNLGH-GFLLLAYQK 467
GL+++ + G L++AY++
Sbjct: 478 GLRSKCISKMGHLIIAYKQ 496
>gi|222632098|gb|EEE64230.1| hypothetical protein OsJ_19063 [Oryza sativa Japonica Group]
Length = 821
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 208/398 (52%), Positives = 274/398 (68%), Gaps = 14/398 (3%)
Query: 72 DRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLG 131
D S DG+ DEF++VKL DIRKEVQCPICLGIIRKTRTVMECLHRFCR+CIDK+MRLG
Sbjct: 71 DSPSSESDGDMDEFILVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLG 130
Query: 132 NNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIA 191
NNECPACRTHCASRRSLRDD NYDALI ALYPDIDKYEEEELAF +EE RNK+IQASIA
Sbjct: 131 NNECPACRTHCASRRSLRDDPNYDALILALYPDIDKYEEEELAFSEEERTRNKKIQASIA 190
Query: 192 QTFQRQTEALGRKRT---PKSTSALRRSHGRYRDTPLRGRRNYR-MTELQGSDENDDANG 247
+TF+RQ+EAL +KR+ ++ RR+ G R RGR + + DE+ D NG
Sbjct: 191 ETFRRQSEALVKKRSVAKATGSTITRRTRGNMR-AKRRGRTSSPDIVATDNEDEDRDENG 249
Query: 248 DAG-KDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASV 306
+ G K+SSS D+RS +VR KR +RW R S+ A + GG D + ++ G +
Sbjct: 250 NEGSKESSSVDDRSPDVRQKRVRRWPVPR-----SSPAKSIGGIDSSFEDIDDLGSGRDI 304
Query: 307 GLIGP--SERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMH 364
P E LAWGK G RS TRHG+ GS+G+ A+ R++KLV+YL++ +E D++ +++
Sbjct: 305 MSTSPLRGEMLAWGKNGTRSQTRHGNSGGSSGRMAKGGRVTKLVEYLRNTDEFDNKFNLY 364
Query: 365 LVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELHSKINLP 424
LVL+ L+ Q +P L++PYL C+PT SVRHLCQ+VA Q + A E+EI++ K ++
Sbjct: 365 LVLLPLNGQSMPKLEKPYLSCQPTFSVRHLCQFVALQLSRHAKEVEIFIRKNPNNGCFAS 424
Query: 425 SSSNSLMIDPCKDKLQVLNEQETLTGLQ-TQNLGHGFL 461
+++ I D L+ L E+++L+ L + GHG L
Sbjct: 425 IDTSADEIKLNHDALERLEEEKSLSELYPSLASGHGDL 462
>gi|297791429|ref|XP_002863599.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309434|gb|EFH39858.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 516
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 208/413 (50%), Positives = 278/413 (67%), Gaps = 25/413 (6%)
Query: 74 SRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN 133
S+SS G++ EF+ + L +IRK+VQCPICLGII+KTRTVMECLHRFCRECIDK+MRLGNN
Sbjct: 106 SKSSISGDQSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN 165
Query: 134 ECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQT 193
ECPACR HCASRRSLRDD +DALIAAL+ +ID YEEEELAF ++E ARNKQIQASIAQ
Sbjct: 166 ECPACRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEMARNKQIQASIAQI 225
Query: 194 FQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGD----- 248
QRQ+EAL ++R+ +A+ R + R R M + S+ ++D N D
Sbjct: 226 SQRQSEALVKRRSLGKEAAVLMRSPRIASSSRRRRNCRNMEQQNASEAHEDDNNDDNNNR 285
Query: 249 AGKDSSSADERSTEVRPKRRKRWYGARFSQ--SSSAAAGTDGGGDENDSEVHRESMGASV 306
G SS+DER TEVR K+R++ +R +Q SSS A +G +ND+EV+R+S G S
Sbjct: 286 GGDKDSSSDERGTEVRHKKRRKRSTSRSTQHPSSSGANKNNGNCADNDTEVYRDSKGISP 345
Query: 307 GLIGPSERLAWGKGGIRSHTRHG-SVSGSNGKNARNNRLSKLVDYLQ-SLEEKDDQLDMH 364
GL+ E LAWG+GG RS+TRHG S SG + K+ RN R++KLV+YL+ S++ +LD+H
Sbjct: 346 GLVWNQEILAWGRGGTRSNTRHGNSTSGGSSKSVRNARVNKLVEYLRSSIDGSSVELDIH 405
Query: 365 LVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVK---ELHSKI 421
+ LVSLD + IP L QPYLCCRPTL V+ L ++VA Q L+ E+E+ + E +
Sbjct: 406 VKLVSLDTKCIPDLPQPYLCCRPTLLVKQLREFVALQMHLKTEEVELLATRRGGEDMAIE 465
Query: 422 NLPSSSNSLMIDPC-----KDKLQVLNEQETLTGLQTQNLG--HGFLLLAYQK 467
NLP ++ P KD++Q L + ET + L+ + L++AY+K
Sbjct: 466 NLP------VVTPASAATSKDEMQSLEDNETFSRLKVDFISSHEQHLIIAYRK 512
>gi|145358843|ref|NP_199241.2| putative E3 ubiquitin-protein ligase RING1a [Arabidopsis thaliana]
gi|302425246|sp|Q9FKW0.2|RNG1A_ARATH RecName: Full=Putative E3 ubiquitin-protein ligase RING1a; AltName:
Full=Polycomb complex protein RING1a; AltName:
Full=Protein RING1a; Short=AtRING1a; AltName: Full=Ring
finger protein 434
gi|332007702|gb|AED95085.1| putative E3 ubiquitin-protein ligase RING1a [Arabidopsis thaliana]
Length = 522
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 207/411 (50%), Positives = 282/411 (68%), Gaps = 16/411 (3%)
Query: 72 DRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLG 131
+RS SS G++ EF+ + L +IRK+VQCPICLGII+KTRTVMECLHRFCRECIDK+MRLG
Sbjct: 109 ERSPSSISGDQSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 168
Query: 132 NNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIA 191
NNECPACR HCASRRSLRDD +DALIAAL+ +ID YEEEELAF ++E ARNKQIQASIA
Sbjct: 169 NNECPACRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEMARNKQIQASIA 228
Query: 192 QTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDA-- 249
Q QRQ+EAL ++R+ +A+ R R R + M + S+ ++D + D
Sbjct: 229 QISQRQSEALVKRRSLGKEAAVLMRSPRIASGSRRRRNSRNMEQQNASEAHEDDDNDDNN 288
Query: 250 --GKDS-SSADERSTEVRPKRRKRWYGARFSQ--SSSAAAGTDGGGDENDSEVHRESMGA 304
G+D SS+DER TEVR K+R++ +R +Q SSS A +G +ND+EV+R++ G
Sbjct: 289 NRGRDKDSSSDERGTEVRQKKRRKRSTSRSTQHPSSSGANKNNGNCADNDTEVYRDTKGI 348
Query: 305 SVGLIGPSERLAWGKGGIRSHTRHG-SVSGSNGKNARNNRLSKLVDYLQ-SLEEKDDQLD 362
S GL+ E LAWG+GG RS+TRHG + SG + K+ RN R++KLV+YL+ S++ +LD
Sbjct: 349 SPGLVWNPEILAWGRGGTRSNTRHGNNTSGGSSKSVRNARVNKLVEYLRSSVDGSSVELD 408
Query: 363 MHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYL----VKELH 418
+H+ LVSLD + IP L QPYLCCRPTL V+ L ++VA Q L+ E+E+ + V E
Sbjct: 409 IHVKLVSLDTKCIPDLPQPYLCCRPTLLVKQLREFVALQIHLKTEEVELLVTRRRVGEDA 468
Query: 419 SKINLPSSSNSLMIDPCKDKLQVLNEQETLTGLQTQNLG--HGFLLLAYQK 467
+ NLP+ + + KD++ L + ETL+ L+ + L++AY+K
Sbjct: 469 AIENLPAVTPASAA-ASKDEMLSLEDNETLSRLKIDFISSHEQHLIIAYRK 518
>gi|226507818|ref|NP_001146078.1| uncharacterized LOC100279610 [Zea mays]
gi|219885587|gb|ACL53168.1| unknown [Zea mays]
gi|413919168|gb|AFW59100.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 475
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 200/404 (49%), Positives = 271/404 (67%), Gaps = 19/404 (4%)
Query: 57 DSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECL 116
DS DG+ S+ S+S G G DEF++VKL++IRKEVQCPICLGIIRKTRTVMECL
Sbjct: 63 DSDTEGDGGADGD-SESSQSDGGG-TDEFMLVKLAEIRKEVQCPICLGIIRKTRTVMECL 120
Query: 117 HRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQ 176
HRFCR+CIDK+MRLGNNECPACRTHCASRRSLRDD NYDALIAALYPDIDKYEEEE AF
Sbjct: 121 HRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEEFAFS 180
Query: 177 DEEAARNKQIQASIAQTFQRQTEALGRKRTPKSTSA------LRRSHGRYRDTPLRGRRN 230
++E RNK+IQ +I +TF+RQ++A+G+KR+ +A RR+ GR R P +
Sbjct: 181 EQERIRNKKIQETIEETFRRQSDAIGKKRSMAKATATAFARKYRRTRGRVRTIPP----D 236
Query: 231 YRMTELQGSDENDDANGDAGKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGG 290
T + + + + ++ SSAD+ S ++R KR ++ G + S + + + D
Sbjct: 237 IAPTGSSEEESGEGNSKETIREQSSADDHSPDLRQKRCRKRSGPQGSPAGTIGS-IDYSF 295
Query: 291 DENDSEVHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDY 350
+END V + + A+ L G E LAWGK G RS RHGSV GSNG+ R+ R++KLVDY
Sbjct: 296 EENDELVGGKEILATSPLQG--EMLAWGKNGARSQNRHGSV-GSNGRTGRSGRIAKLVDY 352
Query: 351 LQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIE 410
L + +E D + + L+L+ +D Q IP L++PYL CRPTLS++HL Q+VA Q + + E+E
Sbjct: 353 LHTADEMDKEFQLFLLLLPVDGQTIPNLEKPYLSCRPTLSIKHLAQFVALQLSCEVEELE 412
Query: 411 IYLVKELH--SKINLPSSSNSLMIDPCKDKLQVLNEQETLTGLQ 452
+Y+ + H S + PSS+ P D L+ LNE++ ++ L
Sbjct: 413 MYIRMDRHRVSVGSRPSSTGEAKSRPF-DDLERLNEEKLVSELH 455
>gi|195650523|gb|ACG44729.1| protein binding protein [Zea mays]
gi|413919170|gb|AFW59102.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 487
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 192/381 (50%), Positives = 260/381 (68%), Gaps = 17/381 (4%)
Query: 80 GEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
G DEF++VKL++IRKEVQCPICLGIIRKTRTVMECLHRFCR+CIDK+MRLGNNECPACR
Sbjct: 96 GTMDEFMLVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACR 155
Query: 140 THCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTE 199
THCASRRSLRDD NYDALIAALYPDIDKYEEEE AF ++E RNK+IQ +I +TF+RQ++
Sbjct: 156 THCASRRSLRDDPNYDALIAALYPDIDKYEEEEFAFSEQERIRNKKIQETIEETFRRQSD 215
Query: 200 ALGRKRTPKSTSA------LRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDS 253
A+G+KR+ +A RR+ GR R P + T + + + + ++
Sbjct: 216 AIGKKRSMAKATATAFARKYRRTRGRVRTIPP----DIAPTGSSEEESGEGNSKETIREQ 271
Query: 254 SSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLIGPSE 313
SSAD+ S ++R KR ++ G + S + + + D +END V + + A+ L G E
Sbjct: 272 SSADDHSPDLRQKRCRKRSGPQGSPAGTIGS-IDYSFEENDELVGGKEILATSPLQG--E 328
Query: 314 RLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQ 373
LAWGK G RS RHGSV GSNG+ R+ R++KLVDYL + +E D + + L+L+ +D Q
Sbjct: 329 MLAWGKNGARSQNRHGSV-GSNGRTGRSGRIAKLVDYLHTADEMDKEFQLFLLLLPVDGQ 387
Query: 374 RIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELH--SKINLPSSSNSLM 431
IP L++PYL CRPTLS++HL Q+VA Q + + E+E+Y+ + H S + PSS+
Sbjct: 388 TIPNLEKPYLSCRPTLSIKHLAQFVALQLSCEVEELEMYIRMDRHRVSVGSRPSSTGEAK 447
Query: 432 IDPCKDKLQVLNEQETLTGLQ 452
P D L+ LNE++ ++ L
Sbjct: 448 SRPF-DDLERLNEEKLVSELH 467
>gi|413919169|gb|AFW59101.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 497
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 192/381 (50%), Positives = 260/381 (68%), Gaps = 17/381 (4%)
Query: 80 GEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
G DEF++VKL++IRKEVQCPICLGIIRKTRTVMECLHRFCR+CIDK+MRLGNNECPACR
Sbjct: 96 GTMDEFMLVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACR 155
Query: 140 THCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTE 199
THCASRRSLRDD NYDALIAALYPDIDKYEEEE AF ++E RNK+IQ +I +TF+RQ++
Sbjct: 156 THCASRRSLRDDPNYDALIAALYPDIDKYEEEEFAFSEQERIRNKKIQETIEETFRRQSD 215
Query: 200 ALGRKRTPKSTSA------LRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDS 253
A+G+KR+ +A RR+ GR R P + T + + + + ++
Sbjct: 216 AIGKKRSMAKATATAFARKYRRTRGRVRTIPP----DIAPTGSSEEESGEGNSKETIREQ 271
Query: 254 SSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLIGPSE 313
SSAD+ S ++R KR ++ G + S + + + D +END V + + A+ L G E
Sbjct: 272 SSADDHSPDLRQKRCRKRSGPQGSPAGTIGS-IDYSFEENDELVGGKEILATSPLQG--E 328
Query: 314 RLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQ 373
LAWGK G RS RHGSV GSNG+ R+ R++KLVDYL + +E D + + L+L+ +D Q
Sbjct: 329 MLAWGKNGARSQNRHGSV-GSNGRTGRSGRIAKLVDYLHTADEMDKEFQLFLLLLPVDGQ 387
Query: 374 RIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELH--SKINLPSSSNSLM 431
IP L++PYL CRPTLS++HL Q+VA Q + + E+E+Y+ + H S + PSS+
Sbjct: 388 TIPNLEKPYLSCRPTLSIKHLAQFVALQLSCEVEELEMYIRMDRHRVSVGSRPSSTGEAK 447
Query: 432 IDPCKDKLQVLNEQETLTGLQ 452
P D L+ LNE++ ++ L
Sbjct: 448 SRPF-DDLERLNEEKLVSELH 467
>gi|48475210|gb|AAT44279.1| putative zinc finger protein [Oryza sativa Japonica Group]
Length = 823
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 199/398 (50%), Positives = 263/398 (66%), Gaps = 28/398 (7%)
Query: 72 DRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLG 131
D S DG+ DEF++VKL DIRKEVQCPICLGIIRKTRTVMECLHRFCR+CIDK+MRLG
Sbjct: 87 DSPSSESDGDMDEFILVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLG 146
Query: 132 NNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIA 191
NNECPACRTHCASRRSLRDD NYDALI ALYPDIDKYEEE IQASIA
Sbjct: 147 NNECPACRTHCASRRSLRDDPNYDALILALYPDIDKYEEE--------------IQASIA 192
Query: 192 QTFQRQTEALGRKRT---PKSTSALRRSHGRYRDTPLRGRRNYR-MTELQGSDENDDANG 247
+TF+RQ+EAL +KR+ ++ RR+ G R RGR + + DE+ D NG
Sbjct: 193 ETFRRQSEALVKKRSVAKATGSTITRRTRGNMR-AKRRGRTSSPDIVATDNEDEDRDENG 251
Query: 248 DAG-KDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASV 306
+ G K+SSS D+RS +VR KR +RW R S+ A + GG D + ++ G +
Sbjct: 252 NEGSKESSSVDDRSPDVRQKRVRRWPVPR-----SSPAKSIGGIDSSFEDIDDLGSGRDI 306
Query: 307 GLIGP--SERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMH 364
P E LAWGK G RS TRHG+ GS+G+ A+ R++KLV+YL++ +E D++ +++
Sbjct: 307 MSTSPLRGEMLAWGKNGTRSQTRHGNSGGSSGRMAKGGRVTKLVEYLRNTDEFDNKFNLY 366
Query: 365 LVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELHSKINLP 424
LVL+ L+ Q +P L++PYL C+PT SVRHLCQ+VA Q + A E+EI++ K ++
Sbjct: 367 LVLLPLNGQSMPKLEKPYLSCQPTFSVRHLCQFVALQLSRHAKEVEIFIRKNPNNGCFAS 426
Query: 425 SSSNSLMIDPCKDKLQVLNEQETLTGL-QTQNLGHGFL 461
+++ I D L+ L E+++L+ L + GHG L
Sbjct: 427 IDTSADEIKLNHDALERLEEEKSLSELYPSLASGHGDL 464
>gi|449531613|ref|XP_004172780.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Cucumis sativus]
Length = 424
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 209/393 (53%), Positives = 275/393 (69%), Gaps = 16/393 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLR 149
++ ++K GII+KTRTVMECLHRFCRECIDK+MRLGNNECPACRTHCASRRSLR
Sbjct: 29 INQVKKLATLLTLTGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 88
Query: 150 DDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRKRTPKS 209
DD NYDALIAALYPDIDKYEEEEL F +EE RNKQIQ SIAQ FQRQ+EAL +KR
Sbjct: 89 DDPNYDALIAALYPDIDKYEEEELTFHEEERNRNKQIQESIAQIFQRQSEALSKKRILGK 148
Query: 210 TSA---LRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDA-GKDSSSADERSTEVRP 265
+A L RS +R+ LR R+N R E+ G ++NDD + + GKDSSSADER TEVR
Sbjct: 149 DTAGVILTRSRRNHRNVHLR-RQNGRGDEVSGYEDNDDDDDNNEGKDSSSADERFTEVRQ 207
Query: 266 KRRKRWYGARFSQSSSAAAGTDGGGD--ENDSEVHRESMGASVGLIGPSERLAWGKGGIR 323
+R+KR R SQ SS+ A D G E+D ++ RE+ S GL+ +E L WG+GG+R
Sbjct: 208 RRKKRHPTVRSSQPSSSIANIDSGDGCAESDLDMSRENRTVSPGLVLNTEMLGWGRGGVR 267
Query: 324 SHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYL 383
S++RHGS GS K++R++RL KL YL+ LEE +++LD+HL+L+S+D++ P LQQP+L
Sbjct: 268 SNSRHGSAGGSGNKSSRSSRLMKLAKYLRGLEENNNELDVHLLLISVDKESTPSLQQPHL 327
Query: 384 CCRPTLSVRHLCQYVAHQTALQASEIEIYLVK---ELHSKINLPSSS-----NSLMIDPC 435
CRP+L+V+HL +YV+ +T LQA ++EI +K ++ + PS+S SL+ DP
Sbjct: 328 YCRPSLTVKHLREYVSRKTPLQADDVEILSLKGRPRTSNEQSTPSASISIDGMSLVFDPL 387
Query: 436 KDKLQVLNEQETLTGLQTQ-NLGHGFLLLAYQK 467
K +LQ L + L GLQ+ L+L Y++
Sbjct: 388 KYELQSLEGEIFLAGLQSDCTYSRDLLILGYRR 420
>gi|218189211|gb|EEC71638.1| hypothetical protein OsI_04070 [Oryza sativa Indica Group]
Length = 491
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 207/416 (49%), Positives = 279/416 (67%), Gaps = 13/416 (3%)
Query: 57 DSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECL 116
DS VDG D S DG+ DEF+IVKL++IRKEVQCPICLGIIRKTRTVMECL
Sbjct: 76 DSDAEFGGGVDG---DSESSQSDGDMDEFIIVKLAEIRKEVQCPICLGIIRKTRTVMECL 132
Query: 117 HRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQ 176
HRFCR+CIDK+MRLGNNECPACRTHCASRRSLRDD NYDALIAALYPDIDKYEEEELAF
Sbjct: 133 HRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFS 192
Query: 177 DEEAARNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTEL 236
+EE +RNK+IQA+I +T +RQ+EA+G+KR+ +A + R+ RGR ++
Sbjct: 193 EEERSRNKKIQATIEETIRRQSEAVGKKRSTAKATATVFARKYRRNMRTRGRGKTIAPDI 252
Query: 237 --QGSDENDDANG---DAGKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGD 291
GSD D G D K+SSSAD+RS+++ PKR ++ +R S + + + +D G +
Sbjct: 253 APTGSDNEDREEGNAIDTTKESSSADDRSSDLMPKRGRKRPASRASPARTIGS-SDHGFE 311
Query: 292 ENDSEVHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYL 351
END + + + L G E LAWGK G RS TRHGSV GSNG+ A+ R++KLVD+L
Sbjct: 312 ENDELIGGKESFTTSPLRG--EMLAWGKNGTRSQTRHGSVGGSNGRMAKGGRVAKLVDHL 369
Query: 352 QSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEI 411
++ ++ D + +++LVL+ LDEQ +P L++PY+ CRPTLS+RHL Q++A Q + Q E++I
Sbjct: 370 RTTDDMDKEFNLYLVLLPLDEQSMPNLEKPYVSCRPTLSIRHLVQFIALQLSRQVEELDI 429
Query: 412 YL-VKELHSKINLPSSSNSLMIDPCKDKLQVLNEQETLTGLQTQNLG-HGFLLLAY 465
++ + + + + + D L+ + E + L+ L HG L L Y
Sbjct: 430 FMRIDHCNGSVTTQDCTTGVAKMRLSDGLERIREDKLLSELHPSFTSHHGDLELLY 485
>gi|242076968|ref|XP_002448420.1| hypothetical protein SORBIDRAFT_06g026880 [Sorghum bicolor]
gi|241939603|gb|EES12748.1| hypothetical protein SORBIDRAFT_06g026880 [Sorghum bicolor]
Length = 493
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 189/387 (48%), Positives = 258/387 (66%), Gaps = 17/387 (4%)
Query: 74 SRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN 133
S S DG +EF++VKL++IRKEVQCPICLGIIRKTRTVMECLHRFCR+CIDK+MRLGNN
Sbjct: 88 SSQSDDGGTNEFMLVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNN 147
Query: 134 ECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQT 193
ECP CRTHCASRRSLRDD YDALIAALYPDIDKYEEEE AF ++E NK+IQ +I +T
Sbjct: 148 ECPTCRTHCASRRSLRDDPKYDALIAALYPDIDKYEEEEFAFSEQERIHNKKIQETIEET 207
Query: 194 FQRQTEALGRKRTPKSTSA------LRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANG 247
F+RQ++A+G+KR+ +A RR+ GR R + T D ++ +
Sbjct: 208 FRRQSDAIGKKRSMAKATATAFARKYRRTRGRVRTI----APDIAPTGSADEDREEENSK 263
Query: 248 DAGKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVG 307
+ ++ S D+ S ++R KR ++ G + S + + + D +END V + + A+
Sbjct: 264 ETTREQCSTDDHSPDLRQKRCRKRSGPQGSPAGTIGS-IDHNCEENDELVGGKEILATSP 322
Query: 308 LIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVL 367
L G E LAWGK G RS RHGSV GSNG+ R+ R++KLVD+L++ +E D + ++LVL
Sbjct: 323 LQG--EMLAWGKNGTRSQNRHGSV-GSNGRIGRSGRIAKLVDHLRTADELDKEFQLYLVL 379
Query: 368 VSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELH--SKINLPS 425
+ +D Q IP L++PYL CRPTLS++HL Q+VA Q + + E+E+Y+ + H S + PS
Sbjct: 380 LPVDGQTIPNLEKPYLSCRPTLSIQHLVQFVALQLSWKVEELEMYIRMDRHRLSVGSEPS 439
Query: 426 SSNSLMIDPCKDKLQVLNEQETLTGLQ 452
S+ P D L+ L E + L+ L
Sbjct: 440 STGEAKPRPF-DGLERLREDKLLSELH 465
>gi|242058973|ref|XP_002458632.1| hypothetical protein SORBIDRAFT_03g037070 [Sorghum bicolor]
gi|241930607|gb|EES03752.1| hypothetical protein SORBIDRAFT_03g037070 [Sorghum bicolor]
Length = 472
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 196/398 (49%), Positives = 268/398 (67%), Gaps = 18/398 (4%)
Query: 63 AADVDGNESDRSRSSGDGE-KDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCR 121
A D G +SD S DG DEF++VKL++IRKEVQCPICLGIIRKTRTVMECLHRFCR
Sbjct: 68 AEDDGGADSDSEFSQSDGGGTDEFMLVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCR 127
Query: 122 ECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAA 181
+CIDK+MRLGNNECPACRTHCASRRSLRDD YDALIAALYPDIDKYEEEELAF ++E
Sbjct: 128 DCIDKSMRLGNNECPACRTHCASRRSLRDDPKYDALIAALYPDIDKYEEEELAFNEQERI 187
Query: 182 RNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTEL--QGS 239
RN++IQ +I +TF+RQ+EA+G+KR+ +A S R+ RGR ++ GS
Sbjct: 188 RNQKIQETIEETFRRQSEAIGKKRSTAKATATAFSRRYRRNMRTRGRGRTVTPDIAPTGS 247
Query: 240 DENDDANGDAG---KDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSE 296
DE D + +A K+ SA++ S ++R KR ++ ++ S + + + +D +END
Sbjct: 248 DEEDREDENANEVTKEPPSANDHSPDLRLKRCRKTSASQASPARNIGS-SDHSFEENDEL 306
Query: 297 VHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEE 356
V + A+ L G E LAWGK G RS RHGS +GSNG+ R+ R++KLVD+L++ +E
Sbjct: 307 VGGKEFLATSPLRG--EMLAWGKNGTRSQNRHGS-AGSNGRIGRSGRIAKLVDHLRNTDE 363
Query: 357 KDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKE 416
D + ++LVL+ +D Q IP L++PYL C+PTLS++HL Q +A Q + + E+E+Y+ +
Sbjct: 364 MDKEFQLYLVLLPVDGQTIPSLEKPYLSCQPTLSIQHLVQLIAVQLSRKVEELEMYIRMD 423
Query: 417 LH--SKINLPSSSNSLMIDPCKDKLQVLNEQETLTGLQ 452
H S ++ SS+ D L+ L E + L+ L
Sbjct: 424 HHHGSAGSMASSTGEF------DGLERLREDKLLSDLH 455
>gi|297597780|ref|NP_001044517.2| Os01g0796700 [Oryza sativa Japonica Group]
gi|53792319|dbj|BAD53026.1| putative ring finger protein 1 [Oryza sativa Japonica Group]
gi|215767809|dbj|BAH00038.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619392|gb|EEE55524.1| hypothetical protein OsJ_03751 [Oryza sativa Japonica Group]
gi|255673777|dbj|BAF06431.2| Os01g0796700 [Oryza sativa Japonica Group]
Length = 489
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 206/416 (49%), Positives = 277/416 (66%), Gaps = 13/416 (3%)
Query: 57 DSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECL 116
DS VDG D S DG+ DEF+IVKL++IRKEVQCPICLGIIRKTRTVMECL
Sbjct: 74 DSDAEFGGGVDG---DSESSQSDGDMDEFIIVKLAEIRKEVQCPICLGIIRKTRTVMECL 130
Query: 117 HRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQ 176
HRFCR+CIDK+MRLGNNECPACRTHCASRRSLRDD NYDALIAALYPDIDKYEEEELAF
Sbjct: 131 HRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFS 190
Query: 177 DEEAARNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTEL 236
+EE +RNK+IQA+I +T +RQ+EA+G+KR+ +A + R+ RGR ++
Sbjct: 191 EEERSRNKKIQATIEETIRRQSEAVGKKRSTAKATATVFARKYRRNMRTRGRGKTIAPDI 250
Query: 237 --QGSDENDDANG---DAGKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGD 291
GSD D G D K+SSSAD+RS+++ PKR ++ +R S + + + +D +
Sbjct: 251 APTGSDNEDREEGNAIDTTKESSSADDRSSDLMPKRGRKRPASRASPARTIGS-SDHVFE 309
Query: 292 ENDSEVHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYL 351
END + + + L G E LAWGK G RS TRHGSV GSNG+ A+ R++KLVD+L
Sbjct: 310 ENDELIGGKESFTTSPLRG--EMLAWGKNGTRSQTRHGSVGGSNGRMAKGGRVAKLVDHL 367
Query: 352 QSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEI 411
++ ++ D + +++LVL+ LDEQ +P L +PY+ CRPTLS+RHL Q++A Q + Q E++I
Sbjct: 368 RTTDDMDKEFNLYLVLLPLDEQSMPNLDKPYISCRPTLSIRHLVQFIALQLSRQVEELDI 427
Query: 412 YL-VKELHSKINLPSSSNSLMIDPCKDKLQVLNEQETLTGLQTQNLG-HGFLLLAY 465
++ + + + + + D L+ + E + L+ L HG L L Y
Sbjct: 428 FMRIDHCNGSVTTQDCTTGVAKMRLSDGLERIREDKLLSELHPSFTSHHGDLELLY 483
>gi|226496665|ref|NP_001147987.1| ribosomal protein L11 methyltransferase containing protein [Zea
mays]
gi|194707960|gb|ACF88064.1| unknown [Zea mays]
gi|195614998|gb|ACG29329.1| ribosomal protein L11 methyltransferase containing protein [Zea
mays]
Length = 494
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 199/344 (57%), Positives = 248/344 (72%), Gaps = 7/344 (2%)
Query: 76 SSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNEC 135
S DG DEF +VKL D+RKEVQCPICLGIIRKTRTVMECLHRFCR+CIDK+MRLGNNEC
Sbjct: 95 SQSDGVMDEFTLVKLVDVRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNEC 154
Query: 136 PACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQ 195
PACRTHCASRRSLRDD NYDALI ALYPDIDKYEEEELAF +EE RNK+IQ SIA+TF+
Sbjct: 155 PACRTHCASRRSLRDDPNYDALILALYPDIDKYEEEELAFSEEERTRNKRIQESIAETFR 214
Query: 196 RQTEALGRKR-TPKSTSA--LRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAG-K 251
RQTEAL +KR T K+T A R++ R + + D++ + NGD G K
Sbjct: 215 RQTEALVKKRSTVKATDAASTRKTRRNMRPRRRGRISSPDIAPTDFDDDDREENGDDGSK 274
Query: 252 DSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLIGP 311
+SSS D+ S +VRPKR +RW R S + + + D +DS R+ M AS L G
Sbjct: 275 ESSSVDDHSPDVRPKRSRRWPMPRRSPAKAIGNTDNSIEDNDDSGGARDFMTASP-LRG- 332
Query: 312 SERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLD 371
E LAWGK G RS TRHG+ SGS+G+ R+ R++KLVD ++ ++ D++L+++LVL+ LD
Sbjct: 333 -EMLAWGKNGTRSQTRHGNSSGSSGRMGRSGRVAKLVDQFRNADDFDNELNLYLVLLPLD 391
Query: 372 EQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVK 415
Q +P L++PYL C PTLSVRHLCQ+VA Q + Q E+EIY+ K
Sbjct: 392 GQSVPKLEKPYLSCLPTLSVRHLCQFVALQLSRQPKEVEIYIRK 435
>gi|414870716|tpg|DAA49273.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 467
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 215/446 (48%), Positives = 279/446 (62%), Gaps = 43/446 (9%)
Query: 51 EQQPPQDSTPAAAADVDGNESDRSRSSG-------------DGEKDEFVIVKLSDIRKEV 97
E++P + +A A+ +GN +D G D K EFV VKLSD+RKEV
Sbjct: 40 EKKPKLEVNGSAGAEANGNANDFGAKEGTEVEASESESEDADAAKQEFVPVKLSDVRKEV 99
Query: 98 QCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDAL 157
QCPICLGIIRKTRTVMECLHRFCRECIDK+MRLGNNECPACRTHCASRRSLRDD NYDAL
Sbjct: 100 QCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDAL 159
Query: 158 IAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRKRTPKSTSA--LRR 215
IAALYPDIDKYEEEELAF +EE RNKQIQASIA+ F++Q+E +GRK T K+T+A +RR
Sbjct: 160 IAALYPDIDKYEEEELAFNEEENDRNKQIQASIAEAFRKQSEVIGRKSTAKATAAAFVRR 219
Query: 216 SHGRYR----DTPLRGRRNYRM--TELQGSDENDDANGDA-GKDSSSADERSTEVRPKRR 268
S R +T RGR L S++ +D NG++ K++SSA+E S E + KR
Sbjct: 220 SRRNIRPNGQNTYFRGRGKASSDDVALACSEDEEDGNGESCSKEASSAEESSPEKKQKRL 279
Query: 269 KRWYGARFSQSSSAAAGTD--GGGDENDSEVHRESMGASVGLIGPSERLAWGKGGIRSHT 326
+W R SS A A D +++D + RE+ S AWGK G RS T
Sbjct: 280 PKWPTPR---SSPARACNDEVASDEKDDVGISRENFST-------SPLRAWGKNGTRSQT 329
Query: 327 RHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCR 386
RH S SGSNG+ + R+ KLV+ L++ ++ + + D+HL L+ LD Q P L++ YLCC
Sbjct: 330 RHSSFSGSNGRMVKGGRMIKLVECLRNSDDNEGERDVHLCLLPLDGQTAPNLEKSYLCCG 389
Query: 387 PTLSVRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSNSLMIDPCKDKLQVLNEQE 446
PTLS++ LCQ+VA QT+ + E+E+Y +K PS S + + C L +E
Sbjct: 390 PTLSIKQLCQFVASQTSHKDEEVEMYALK--------PSCSKPVSTNTCGPDKARLAGEE 441
Query: 447 TLTGLQTQ-NLGHGFLLLAYQKILLN 471
L+ L++ +G L L Y + N
Sbjct: 442 RLSDLRSSFTFPNGVLELVYAIKVAN 467
>gi|356546993|ref|XP_003541903.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Glycine max]
Length = 501
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 226/410 (55%), Positives = 292/410 (71%), Gaps = 20/410 (4%)
Query: 70 ESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMR 129
+SD SSG EK EFV V+L +IRK+VQCPICLGII+KTRTVMECLHRFCRECIDK+MR
Sbjct: 96 DSDDIPSSGSEEKPEFVYVELLEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMR 155
Query: 130 LGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQAS 189
LGNNECPACRTHCASRRSLRDD NYDALI+ALYPDI+KYEEEEL F++EE RNKQIQAS
Sbjct: 156 LGNNECPACRTHCASRRSLRDDPNYDALISALYPDIEKYEEEELEFREEEKNRNKQIQAS 215
Query: 190 IAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDA 249
IA+ QRQ+EAL ++R + + RS R+ + ++GS++N++ N +
Sbjct: 216 IAKVVQRQSEALVKRRKDTPGTFVTRSQRNQRNR-------RQTQAIEGSEDNEEENDNN 268
Query: 250 GKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLI 309
K+SSS DERSTE R +RRKRW R SQ SS+ DGG +++D ++ RE+ G S +
Sbjct: 269 EKNSSSDDERSTEHRQRRRKRWARVRSSQPSSSMTSPDGGCNDSDMDISRENRGISSRQV 328
Query: 310 GPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVS 369
+L WG+GG RS+TRHGS SN K++R++RLSK VD+L++L+E D+ D+HL+LVS
Sbjct: 329 SKHGKLTWGRGGFRSNTRHGSGGSSNSKSSRSSRLSKFVDHLRNLDENTDEFDVHLMLVS 388
Query: 370 LDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSN- 428
LD+Q LQQPYLCCRPTLSVRHL ++VA QT L IEI VK S N S+N
Sbjct: 389 LDQQSTSSLQQPYLCCRPTLSVRHLYEHVARQTHLPVEGIEILAVKGCCS-TNRDKSTNE 447
Query: 429 ----------SLMIDPCKDKLQVLNEQETLTGLQTQNLGH-GFLLLAYQK 467
+L+IDP KD+L++L ETL+GL+++ + G L++AY +
Sbjct: 448 NSDLAYDELSTLVIDPHKDELEILQGHETLSGLRSKCISKMGHLIIAYNQ 497
>gi|326490487|dbj|BAJ84907.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 187/337 (55%), Positives = 238/337 (70%), Gaps = 9/337 (2%)
Query: 74 SRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN 133
S S + DEF++VKL DIRKEVQCPICLGIIRKTRTVMECLHRFCR+CIDK+MRLGNN
Sbjct: 97 SSESDAADMDEFILVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNN 156
Query: 134 ECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQT 193
ECPACRTHC SRRSLRDD N+DALI ALYPDIDKYEEEELAF +EE RNK+IQ SIA+T
Sbjct: 157 ECPACRTHCKSRRSLRDDPNFDALILALYPDIDKYEEEELAFGEEEKTRNKKIQDSIAET 216
Query: 194 FQRQTEALGRKRT-PKSTSALRRSHGRYRDTPLRGRR---NYRMTELQGSDENDDANGDA 249
F+RQTEAL +KR+ K+ ++ R++ G R T RGR + T++ DE ++ D
Sbjct: 217 FRRQTEALVKKRSNAKAIASSRKTRGSLR-TKKRGRTSSPDNAPTDID-DDEREENGNDG 274
Query: 250 GKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLI 309
K+SSS D+RS +V+ KR +RW R S + G D +END + A+ L
Sbjct: 275 SKESSSVDDRSPDVKMKRARRWPVPR-SSPAKTIGGVDSSYEENDDLGGARDILATSPLR 333
Query: 310 GPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVS 369
G E LAWGK G RS TRHG+ GS+G+ + R++KLVD+L++ +E D + +++L L
Sbjct: 334 G--EMLAWGKNGTRSQTRHGNPGGSSGRMVKGGRVAKLVDHLRNADEFDTKFNLYLALTP 391
Query: 370 LDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQA 406
LD Q +P L++ YL C+PT SV HLCQ+VA Q + QA
Sbjct: 392 LDGQSMPKLEKSYLSCQPTFSVSHLCQFVAFQLSRQA 428
>gi|293331775|ref|NP_001169665.1| uncharacterized LOC100383546 [Zea mays]
gi|224030721|gb|ACN34436.1| unknown [Zea mays]
gi|414880136|tpg|DAA57267.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 474
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 189/375 (50%), Positives = 258/375 (68%), Gaps = 17/375 (4%)
Query: 49 LEEQQPPQDSTPAAAADVDGN---ESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGI 105
L + +P Q + A+ DG +S+ S+S G G D F++VKL++IRKEVQCPICLGI
Sbjct: 52 LTDPEPQQGFEDDSDAEDDGGADGDSEFSQSDGGG-NDGFMLVKLAEIRKEVQCPICLGI 110
Query: 106 IRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDI 165
IRKTRTVMECLHRFCR+CIDK+MRLGNNECP+CRTHCASRRSLRDD NYDALIAALYPDI
Sbjct: 111 IRKTRTVMECLHRFCRDCIDKSMRLGNNECPSCRTHCASRRSLRDDPNYDALIAALYPDI 170
Query: 166 DKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRKRT--PKSTSALRRSHGRYRDT 223
DKYEEEELAF ++E RN++IQ +I +TF+RQ++A+G+KR+ ++ +A R + R T
Sbjct: 171 DKYEEEELAFNEQEMTRNQKIQETIEETFRRQSQAIGKKRSIAKETGTAFARKYRRNMRT 230
Query: 224 PLRGRRNYRMTELQGSDEND---DANGDAGKDSSSADERSTEVRPKRRKRWYGARFSQSS 280
RGR S+E D + + K SSAD+ S ++R KR ++ SQ+S
Sbjct: 231 RGRGRTTTPDIAPTSSNEEDREGENVNEVTKVPSSADDHSPDLRQKRCRK---TSTSQAS 287
Query: 281 SA--AAGTDGGGDENDSEVHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKN 338
A +D +END V + + A+ L G E LAWGK G RS RHGS +GSNG+
Sbjct: 288 PARNIGSSDHSFEENDELVAAKEILATSPLRG--EMLAWGKNGTRSQNRHGS-AGSNGRI 344
Query: 339 ARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYV 398
R+ R++KLVD+L + +E D + ++LVL+ +D Q IP L++PYL C+PTLS++HL + +
Sbjct: 345 GRSGRIAKLVDHLCNADEMDKEFQLYLVLLPVDGQTIPHLEKPYLSCQPTLSIQHLVELI 404
Query: 399 AHQTALQASEIEIYL 413
A Q + + E+E+Y+
Sbjct: 405 ALQLSRKVEELEMYI 419
>gi|357125426|ref|XP_003564395.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Brachypodium distachyon]
Length = 481
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 198/398 (49%), Positives = 260/398 (65%), Gaps = 26/398 (6%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC 142
DEF++VKL++IRKE QCPICLGIIRKTRTVMECLHRFCR+CIDK+MRLGNNECPACRTHC
Sbjct: 89 DEFILVKLAEIRKEFQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHC 148
Query: 143 ASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALG 202
ASRRSLRDD NYDALIA LYPDIDKYEEEELAF +EE RNK+IQA+I +T ++Q+EA+G
Sbjct: 149 ASRRSLRDDPNYDALIATLYPDIDKYEEEELAFSEEEKTRNKKIQATIEETIRKQSEAIG 208
Query: 203 RKR-TPKSTS-ALRRSHGRYRDTPLRGRRNYRMTELQGSDEND----DANGDAGKDSSSA 256
+KR T K+T+ A R + R RG+ T L SD+ D +ANG A K+SSSA
Sbjct: 209 KKRSTAKATANAFARKYRRNIQPRGRGKTIALDTSLAVSDDVDIEEGNANG-ASKESSSA 267
Query: 257 DERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLIGPSERLA 316
D S ++ KR + A S + TD G +EN V + S L G E LA
Sbjct: 268 DNHSPDLMQKRGSK-RPASLSSPARTIGTTDHGIEENGELVSGKESFTSSPLRG--EMLA 324
Query: 317 WGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIP 376
WGK G RS TR+G++ G NG+ + R SKLV++L++ E D + +++L+L+ LD Q P
Sbjct: 325 WGKNGTRSQTRYGNIGGLNGRLGKGGRGSKLVEHLRTTNEMDKEFNLYLILLPLDGQTTP 384
Query: 377 GLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSNSLMIDPCK 436
L++PY+ C PT+S+RHL Q++A Q + + E+EIY+ L ++ + M+DP
Sbjct: 385 SLEKPYVSCGPTVSIRHLVQFLALQLSRKVEELEIYIRMGLLNR-------SVTMLDPTS 437
Query: 437 --------DKLQVLNEQETLTGLQTQNL-GHGFLLLAY 465
D L+ L+E + L+ L GH L L Y
Sbjct: 438 VETKLHQFDNLERLSEDKLLSDLHLSFASGHSDLELLY 475
>gi|357128851|ref|XP_003566083.1| PREDICTED: uncharacterized protein LOC100846593 [Brachypodium
distachyon]
Length = 917
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 188/370 (50%), Positives = 241/370 (65%), Gaps = 29/370 (7%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC 142
DEF++VKL DIRKEVQCPICLGIIRKTRTVMECLHRFCR+CIDK+MRLGNNECPACRTHC
Sbjct: 107 DEFIVVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHC 166
Query: 143 ASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALG 202
SRRSLRDD N+DALI ALYPDIDKYEEE IQ SIA+TF+RQTEAL
Sbjct: 167 KSRRSLRDDPNFDALILALYPDIDKYEEE--------------IQESIAETFRRQTEALV 212
Query: 203 RKR-TPKSTSALRRSHGRYRDTPLRGRRNYR-MTELQGSDENDDANG-DAGKDSSSADER 259
+KR T K+ ++ R++ G R RGR + + DE+ + NG D K+SSS D+R
Sbjct: 213 KKRSTAKAIASSRKTRGNLR-AKRRGRTSSPDIVTSDIDDEDKEENGNDGSKESSSVDDR 271
Query: 260 STEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLIGPSERLAWGK 319
S +V+ KR +RW R S S + + DG + ND + + L G E AWGK
Sbjct: 272 SPDVKVKRARRWPVPRPSPSKTIGS-IDGTYEGNDDLGGVRDILTTSPLRG--EMPAWGK 328
Query: 320 GGIRSHT-RHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGL 378
G RS T RHG+ GS+G+ ++ R++K+VD+L++ +E D +L +LVL LD Q +P L
Sbjct: 329 NGTRSQTSRHGNSGGSSGRMVKSGRVAKMVDHLRNADESDSKL--YLVLSPLDGQNMPKL 386
Query: 379 QQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSNSLMIDPCKDK 438
++PYL C T SV HLCQ+VA Q + QA E+EIY+ K +K + D ++K
Sbjct: 387 EKPYLSCHSTFSVSHLCQFVALQLSRQAKEVEIYIRKNPGNKCFAMKDT-----DAAEEK 441
Query: 439 LQVLNEQETL 448
L + N E L
Sbjct: 442 LDLFNGLERL 451
>gi|242088361|ref|XP_002440013.1| hypothetical protein SORBIDRAFT_09g024430 [Sorghum bicolor]
gi|241945298|gb|EES18443.1| hypothetical protein SORBIDRAFT_09g024430 [Sorghum bicolor]
Length = 449
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 243/345 (70%), Gaps = 11/345 (3%)
Query: 76 SSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNEC 135
S DG DEF +VKL D+RKEVQCPICLGIIRKTRTVMECLHRFCR+CIDK+MRLGNNEC
Sbjct: 98 SQSDGVMDEFTLVKLVDVRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNEC 157
Query: 136 PACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQ 195
PACRTHCASRRSLRDD NYDALI ALYPDIDKYEEEELAF +EE RNK+IQ SIA+TF+
Sbjct: 158 PACRTHCASRRSLRDDPNYDALILALYPDIDKYEEEELAFSEEERTRNKRIQESIAETFR 217
Query: 196 RQTEALGRKR-TPKSTSA--LRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAG-K 251
RQTEAL +KR T K T A R++ R + + DE+ + NGD G K
Sbjct: 218 RQTEALVKKRSTVKGTDAASTRKTRRNMRPRRRGRISSPDIAPTDFDDEDREENGDVGSK 277
Query: 252 DSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLIGP 311
DSSS D+ S +VRPKR +RW R S + + + D +DS R+ + AS L G
Sbjct: 278 DSSSVDDHSPDVRPKRARRWPMPRRSPAKTIGNTDNSIEDNDDSGGARDFVTASP-LRG- 335
Query: 312 SERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLD 371
E LAWGK G RS TRHG+ SGS+G+ + R++KLVD L++ ++ D +L+++LVL+ LD
Sbjct: 336 -EMLAWGKNGTRSQTRHGNTSGSSGRMGKGGRVAKLVDQLRNADDFDSKLNLYLVLLPLD 394
Query: 372 EQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKE 416
Q +P L++PYL C PTLSV+HLCQ + +S +++Y V++
Sbjct: 395 GQSVPKLEKPYLSCLPTLSVQHLCQVY----GITSSLVKMYGVEQ 435
>gi|297843186|ref|XP_002889474.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335316|gb|EFH65733.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 464
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 181/383 (47%), Positives = 252/383 (65%), Gaps = 13/383 (3%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCAS 144
++ V L+DIR++VQC ICLGIIRKTRTVMECLHRFCRECIDK+MRLGNNECP CR HCAS
Sbjct: 89 YLYVDLADIRRDVQCSICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPTCRKHCAS 148
Query: 145 RRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRK 204
RRSLRDD N+DALIA L+ +ID++EEEE+AF+ ++ ARNKQIQASIAQ QRQ+EAL ++
Sbjct: 149 RRSLRDDPNFDALIATLFENIDQFEEEEMAFRQDDKARNKQIQASIAQVSQRQSEALAKR 208
Query: 205 RTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSSSADERSTEVR 264
++ +A+ R R R M + +DD GKDSSS DE E+
Sbjct: 209 KSFGKDAAVLSRSRRSGSGSRRRRNCRNMEQDTSEAHDDDDQNKRGKDSSS-DEPCAEIL 267
Query: 265 PKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLIGPSERLAWGKGGIRS 324
++RK+ + SS+A + G+ + R+S G S L+ SE LAWG+GG RS
Sbjct: 268 LRKRKKRSTTQ-PSSSNANNNDNCAGNGTEQTHQRDSRGISPVLMWNSEILAWGRGGTRS 326
Query: 325 HTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLC 384
+TR G+ + + RN RL++LV+YL SLE +LD+HL L+SLD + + L +PYLC
Sbjct: 327 NTRQGN-NNQGAISKRNARLNRLVEYLGSLEGNSVELDIHLKLISLDTEGLLNLLEPYLC 385
Query: 385 CRPTLSVRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSNSLMIDPCKDKLQVLNE 444
CRPTL V+ L +YVA Q L+A E+E+++ K+ I +S+ +K+Q L +
Sbjct: 386 CRPTLLVKQLREYVARQMKLKAEEVELFVSKDGDRVIGNKTST---------EKMQSLQD 436
Query: 445 QETLTGLQTQNL-GHGFLLLAYQ 466
ETL+ L+ + HG++++A++
Sbjct: 437 DETLSKLKVDCISSHGYMIVAFR 459
>gi|255553681|ref|XP_002517881.1| ring finger protein, putative [Ricinus communis]
gi|223542863|gb|EEF44399.1| ring finger protein, putative [Ricinus communis]
Length = 342
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 204/378 (53%), Positives = 242/378 (64%), Gaps = 63/378 (16%)
Query: 113 MECLHRFCRECIDKAMRLG-----------------NNECPACRTHCASRRSLRDDLNYD 155
MECLHRFCRECIDK+MRLG NNECPACRTHCASRRSLRDD NYD
Sbjct: 1 MECLHRFCRECIDKSMRLGYVRKILSYLSVIMSLLGNNECPACRTHCASRRSLRDDPNYD 60
Query: 156 ALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRKRT-PKSTSA-- 212
ALIAALYPDIDKYEEEELAF +EE RNKQIQASIAQ FQRQ+EAL +KRT K T+
Sbjct: 61 ALIAALYPDIDKYEEEELAFHEEERTRNKQIQASIAQIFQRQSEALAKKRTMGKETTGPF 120
Query: 213 LRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGD-AGKDSSSADERSTEVRPKRRKRW 271
+ RS +R P R RRN R TE QGS++ ++ N D GKDSSS DERSTEVR +RRKR
Sbjct: 121 VTRSQRNHRTVPSRRRRNSRGTEYQGSEDIEEENDDNGGKDSSSTDERSTEVRQRRRKRR 180
Query: 272 YGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSV 331
G R SQ SS+A+ +GG END E RE+ G S GL+ +E LAWG+GG RSHTRHG+
Sbjct: 181 PGIRPSQPSSSASNLEGGSIENDLEAGRENRGISPGLVWNTEMLAWGRGGARSHTRHGNA 240
Query: 332 SGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSV 391
SG N KN+R+ RLSKLV+YL+SLEEK+D
Sbjct: 241 SGCNNKNSRSTRLSKLVEYLRSLEEKND-------------------------------- 268
Query: 392 RHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSNSLMIDPC-KDKLQVLNEQETLTG 450
+Y+AHQT LQA E+EI LVK H P + S + P ++LQ+L QETL G
Sbjct: 269 ----EYIAHQTPLQAEEVEILLVKGAHQ----PDDNISTLHPPILMEELQILKGQETLAG 320
Query: 451 LQTQNL-GHGFLLLAYQK 467
L+ + L+LAY++
Sbjct: 321 LKANSSPSRDRLILAYRQ 338
>gi|145335046|ref|NP_171873.2| ubiquitin-protein ligase RNF1/2 [Arabidopsis thaliana]
gi|122230252|sp|Q0WX00.1|RNG1B_ARATH RecName: Full=Putative E3 ubiquitin-protein ligase RING1b; AltName:
Full=Polycomb complex protein RING1b; AltName:
Full=Protein RING1b; Short=AtRING1b; AltName: Full=Ring
finger protein 5
gi|110740485|dbj|BAE98348.1| hypothetical protein [Arabidopsis thaliana]
gi|332189487|gb|AEE27608.1| ubiquitin-protein ligase RNF1/2 [Arabidopsis thaliana]
Length = 460
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 259/401 (64%), Gaps = 23/401 (5%)
Query: 72 DRSRSSGDGE--KDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMR 129
+RS+SS GE + E+++V L+DI K+VQC ICLGIIRKTRTVMECLHRFCRECIDK+MR
Sbjct: 74 ERSQSSSAGELSESEYMVVDLADICKDVQCSICLGIIRKTRTVMECLHRFCRECIDKSMR 133
Query: 130 LGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQAS 189
LGNNECP CR HCASRRSLRDD N+DALIAAL+ +IDK+EEEEL F+ ++ ARNKQIQAS
Sbjct: 134 LGNNECPTCRKHCASRRSLRDDPNFDALIAALFKNIDKFEEEELNFRQDDEARNKQIQAS 193
Query: 190 IAQTFQRQTEAL-GRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGD 248
IAQ QRQ++AL RK K T+ L RS R RRN R E S+ NDD + +
Sbjct: 194 IAQVSQRQSKALVKRKSVGKGTAILSRSRRSG--GGSRRRRNCRNIEQDTSEANDDDDQN 251
Query: 249 A-GKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVG 307
GKDSSS DE R KR A SS+A + G+ + R+S S
Sbjct: 252 KRGKDSSS-DEPCERQRKKR-----SATQPSSSNANNNDNCAGNGTEQTHQRDSRVISPV 305
Query: 308 LIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVL 367
L+ SE +AWG+GG RS+TR G+ + + RN RL +LV+YL SLE +LD+HL L
Sbjct: 306 LVWNSELIAWGRGGTRSNTRQGN-NNQGAISKRNARLKRLVEYLGSLEGNSVELDIHLKL 364
Query: 368 VSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSS 427
VSLD + + L +PYLC RPTL V+ L +YVA L+A E+E+ + K+ + I +S+
Sbjct: 365 VSLDTEGLLNLHEPYLCFRPTLLVKQLREYVARHLKLKAEEVELLVSKDGDTVIGNKTST 424
Query: 428 NSLMIDPCKDKLQVLNEQETLTGLQTQNL-GHGFLLLAYQK 467
+K+Q L + ET+ L+ + +G++++ Y++
Sbjct: 425 ---------EKMQSLQDDETVAKLKVDCISSNGYMIVVYRR 456
>gi|334182275|ref|NP_001184901.1| ubiquitin-protein ligase RNF1/2 [Arabidopsis thaliana]
gi|332189489|gb|AEE27610.1| ubiquitin-protein ligase RNF1/2 [Arabidopsis thaliana]
Length = 468
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 194/410 (47%), Positives = 259/410 (63%), Gaps = 27/410 (6%)
Query: 67 DGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDK 126
D E +S S+G+ + E+++V L+DI K+VQC ICLGIIRKTRTVMECLHRFCRECIDK
Sbjct: 73 DSKERSQSSSAGELSESEYMVVDLADICKDVQCSICLGIIRKTRTVMECLHRFCRECIDK 132
Query: 127 AMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQI 186
+MRLGNNECP CR HCASRRSLRDD N+DALIAAL+ +IDK+EEEEL F+ ++ ARNKQI
Sbjct: 133 SMRLGNNECPTCRKHCASRRSLRDDPNFDALIAALFKNIDKFEEEELNFRQDDEARNKQI 192
Query: 187 QASIAQTFQRQTEAL-GRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDA 245
QASIAQ QRQ++AL RK K T+ L RS R RRN R E S+ NDD
Sbjct: 193 QASIAQVSQRQSKALVKRKSVGKGTAILSRSRRSG--GGSRRRRNCRNIEQDTSEANDDD 250
Query: 246 NGDA-GKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGA 304
+ + GKDSSS DE R KR A SS+A + G+ + R+S
Sbjct: 251 DQNKRGKDSSS-DEPCERQRKKR-----SATQPSSSNANNNDNCAGNGTEQTHQRDSRVI 304
Query: 305 SVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMH 364
S L+ SE +AWG+GG RS+TR G+ + + RN RL +LV+YL SLE +LD+H
Sbjct: 305 SPVLVWNSELIAWGRGGTRSNTRQGN-NNQGAISKRNARLKRLVEYLGSLEGNSVELDIH 363
Query: 365 LVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQ------YVAHQTALQASEIEIYLVKELH 418
L LVSLD + + L +PYLC RPTL V+ L + YVA L+A E+E+ + K+
Sbjct: 364 LKLVSLDTEGLLNLHEPYLCFRPTLLVKQLREVSSLPLYVARHLKLKAEEVELLVSKDGD 423
Query: 419 SKINLPSSSNSLMIDPCKDKLQVLNEQETLTGLQTQNL-GHGFLLLAYQK 467
+ I +S+ +K+Q L + ET+ L+ + +G++++ Y++
Sbjct: 424 TVIGNKTST---------EKMQSLQDDETVAKLKVDCISSNGYMIVVYRR 464
>gi|334182273|ref|NP_001184900.1| ubiquitin-protein ligase RNF1/2 [Arabidopsis thaliana]
gi|332189488|gb|AEE27609.1| ubiquitin-protein ligase RNF1/2 [Arabidopsis thaliana]
Length = 466
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 195/407 (47%), Positives = 259/407 (63%), Gaps = 29/407 (7%)
Query: 72 DRSRSSGDGE--KDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMR 129
+RS+SS GE + E+++V L+DI K+VQC ICLGIIRKTRTVMECLHRFCRECIDK+MR
Sbjct: 74 ERSQSSSAGELSESEYMVVDLADICKDVQCSICLGIIRKTRTVMECLHRFCRECIDKSMR 133
Query: 130 LGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQAS 189
LGNNECP CR HCASRRSLRDD N+DALIAAL+ +IDK+EEEEL F+ ++ ARNKQIQAS
Sbjct: 134 LGNNECPTCRKHCASRRSLRDDPNFDALIAALFKNIDKFEEEELNFRQDDEARNKQIQAS 193
Query: 190 IAQTFQRQTEAL-GRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGD 248
IAQ QRQ++AL RK K T+ L RS R RRN R E S+ NDD + +
Sbjct: 194 IAQVSQRQSKALVKRKSVGKGTAILSRSRRSG--GGSRRRRNCRNIEQDTSEANDDDDQN 251
Query: 249 A-GKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVG 307
GKDSSS DE R KR A SS+A + G+ + R+S S
Sbjct: 252 KRGKDSSS-DEPCERQRKKR-----SATQPSSSNANNNDNCAGNGTEQTHQRDSRVISPV 305
Query: 308 LIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVL 367
L+ SE +AWG+GG RS+TR G+ + + RN RL +LV+YL SLE +LD+HL L
Sbjct: 306 LVWNSELIAWGRGGTRSNTRQGN-NNQGAISKRNARLKRLVEYLGSLEGNSVELDIHLKL 364
Query: 368 VSLDEQRIPGLQQPYLCCRPTLSVRHLCQ------YVAHQTALQASEIEIYLVKELHSKI 421
VSLD + + L +PYLC RPTL V+ L + YVA L+A E+E+ + K+ + I
Sbjct: 365 VSLDTEGLLNLHEPYLCFRPTLLVKQLREVSSLPLYVARHLKLKAEEVELLVSKDGDTVI 424
Query: 422 NLPSSSNSLMIDPCKDKLQVLNEQETLTGLQTQNL-GHGFLLLAYQK 467
+S+ +K+Q L + ET+ L+ + +G++++ Y++
Sbjct: 425 GNKTST---------EKMQSLQDDETVAKLKVDCISSNGYMIVVYRR 462
>gi|10176883|dbj|BAB10113.1| unnamed protein product [Arabidopsis thaliana]
Length = 486
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 186/410 (45%), Positives = 256/410 (62%), Gaps = 50/410 (12%)
Query: 72 DRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLG 131
+RS SS G++ EF+ + L +IRK+VQCPICLGII+KTRTVMECLHRFCRECIDK+MRLG
Sbjct: 109 ERSPSSISGDQSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 168
Query: 132 NNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIA 191
NNECPACR HCASRRSLRDD +DALIAAL+ +ID YEEEELAF ++E ARNKQIQASIA
Sbjct: 169 NNECPACRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEMARNKQIQASIA 228
Query: 192 QTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDA-- 249
Q QRQ+EAL ++R+ +A+ R R R + M + S+ ++D + D
Sbjct: 229 QISQRQSEALVKRRSLGKEAAVLMRSPRIASGSRRRRNSRNMEQQNASEAHEDDDNDDNN 288
Query: 250 --GKDS-SSADERSTEVRPKRRKRWYGARFSQ--SSSAAAGTDGGGDENDSEVHRESMGA 304
G+D SS+DER TEVR K+R++ +R +Q SSS A +G +ND+EV+R++ G
Sbjct: 289 NRGRDKDSSSDERGTEVRQKKRRKRSTSRSTQHPSSSGANKNNGNCADNDTEVYRDTKGI 348
Query: 305 SVGLIGPSERLAWGKGGIRSHTRHG-SVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDM 363
S GL+ E LAWG+GG RS+TRHG + SG + K+ RN R++KLV+YL+S
Sbjct: 349 SPGLVWNPEILAWGRGGTRSNTRHGNNTSGGSSKSVRNARVNKLVEYLRS---------- 398
Query: 364 HLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYL----VKELHS 419
S+D + ++VA Q L+ E+E+ + V E +
Sbjct: 399 -----SVDGSSV--------------------EFVALQIHLKTEEVELLVTRRRVGEDAA 433
Query: 420 KINLPSSSNSLMIDPCKDKLQVLNEQETLTGLQTQNLG--HGFLLLAYQK 467
NLP+ + + KD++ L + ETL+ L+ + L++AY+K
Sbjct: 434 IENLPAVTPASAA-ASKDEMLSLEDNETLSRLKIDFISSHEQHLIIAYRK 482
>gi|294462674|gb|ADE76882.1| unknown [Picea sitchensis]
Length = 475
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/361 (47%), Positives = 235/361 (65%), Gaps = 26/361 (7%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCAS 144
+V+V L+ IR+E+QCPICLGIIRKTRTVMECLHRFCR+CIDK+MRLGNNECPACRTHCAS
Sbjct: 52 YVLVNLAAIREEMQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCAS 111
Query: 145 RRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRK 204
RRSLRDD NYDALIAA+YPD+DKYE EE+A +EE RN+QIQASIA TF+RQ+EA+ R+
Sbjct: 112 RRSLRDDPNYDALIAAIYPDLDKYEAEEMALHEEEEDRNRQIQASIADTFRRQSEAMTRR 171
Query: 205 RTPKSTSA---LRRSHGRYRDTPLRGRRNYRMTELQGSDENDDA-NGDAGKDSSSADERS 260
R +A +R++HG++ + R N R+ A +GD G+D +
Sbjct: 172 RRTAKATAAAFVRKAHGKFCGVQGQSRVNNRVKNRSKRPRRSSATDGDEGEDLKQSFSDD 231
Query: 261 TEVRPKRRKRWYGARFSQSSSAAAGTD-GGGDE------------------NDSEVHRES 301
E +P+R R S +A D G G+E N +EV RES
Sbjct: 232 EEPQPRRWTRRKRRAGSSLPETSADMDVGNGEEPDDINDEEAGENIQLVEYNQAEVSRES 291
Query: 302 MGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYL--QSLEEKDD 359
AS G +E LAWGKGG RSH ++ SV G++ KN R ++K+ DYL ++ EE +
Sbjct: 292 TDASPGNARNAEGLAWGKGGARSHMKYASVRGTHVKNNRCTYVAKMADYLLTKAHEEMET 351
Query: 360 QLDMHLVLVSLD-EQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELH 418
+ D+H L+ + E++IP L++P+LCCRPTL+V H+C++++ + ++E+ + K+ +
Sbjct: 352 KYDIHFTLLPFENEEKIPSLRRPHLCCRPTLTVEHICKFLSRFCTVPPEDLELVVEKQNN 411
Query: 419 S 419
S
Sbjct: 412 S 412
>gi|238481477|ref|NP_001154760.1| putative E3 ubiquitin-protein ligase RING1a [Arabidopsis thaliana]
gi|332007703|gb|AED95086.1| putative E3 ubiquitin-protein ligase RING1a [Arabidopsis thaliana]
Length = 525
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 183/415 (44%), Positives = 265/415 (63%), Gaps = 21/415 (5%)
Query: 72 DRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRL- 130
+RS SS G++ EF+ + L +IRK+VQCPICL ++ R + ++ ++C + +
Sbjct: 109 ERSPSSISGDQSEFMEIDLGEIRKDVQCPICLVGMKFLRLFIS-YYKENKDCDGMSPQFC 167
Query: 131 ---GNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQ 187
NNECPACR HCASRRSLRDD +DALIAAL+ +ID YEEEELAF ++E ARNKQIQ
Sbjct: 168 ATFKNNECPACRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEMARNKQIQ 227
Query: 188 ASIAQTFQRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANG 247
ASIAQ QRQ+EAL ++R+ +A+ R R R + M + S+ ++D +
Sbjct: 228 ASIAQISQRQSEALVKRRSLGKEAAVLMRSPRIASGSRRRRNSRNMEQQNASEAHEDDDN 287
Query: 248 DA----GKDS-SSADERSTEVRPKRRKRWYGARFSQ--SSSAAAGTDGGGDENDSEVHRE 300
D G+D SS+DER TEVR K+R++ +R +Q SSS A +G +ND+EV+R+
Sbjct: 288 DDNNNRGRDKDSSSDERGTEVRQKKRRKRSTSRSTQHPSSSGANKNNGNCADNDTEVYRD 347
Query: 301 SMGASVGLIGPSERLAWGKGGIRSHTRHG-SVSGSNGKNARNNRLSKLVDYLQ-SLEEKD 358
+ G S GL+ E LAWG+GG RS+TRHG + SG + K+ RN R++KLV+YL+ S++
Sbjct: 348 TKGISPGLVWNPEILAWGRGGTRSNTRHGNNTSGGSSKSVRNARVNKLVEYLRSSVDGSS 407
Query: 359 DQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYL----V 414
+LD+H+ LVSLD + IP L QPYLCCRPTL V+ L ++VA Q L+ E+E+ + V
Sbjct: 408 VELDIHVKLVSLDTKCIPDLPQPYLCCRPTLLVKQLREFVALQIHLKTEEVELLVTRRRV 467
Query: 415 KELHSKINLPSSSNSLMIDPCKDKLQVLNEQETLTGLQTQNLG--HGFLLLAYQK 467
E + NLP+ + + KD++ L + ETL+ L+ + L++AY+K
Sbjct: 468 GEDAAIENLPAVTPASAA-ASKDEMLSLEDNETLSRLKIDFISSHEQHLIIAYRK 521
>gi|414880137|tpg|DAA57268.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 357
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/308 (49%), Positives = 211/308 (68%), Gaps = 13/308 (4%)
Query: 113 MECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEE 172
MECLHRFCR+CIDK+MRLGNNECP+CRTHCASRRSLRDD NYDALIAALYPDIDKYEEEE
Sbjct: 1 MECLHRFCRDCIDKSMRLGNNECPSCRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEE 60
Query: 173 LAFQDEEAARNKQIQASIAQTFQRQTEALGRKRT--PKSTSALRRSHGRYRDTPLRGRRN 230
LAF ++E RN++IQ +I +TF+RQ++A+G+KR+ ++ +A R + R T RGR
Sbjct: 61 LAFNEQEMTRNQKIQETIEETFRRQSQAIGKKRSIAKETGTAFARKYRRNMRTRGRGRTT 120
Query: 231 YRMTELQGSDEND---DANGDAGKDSSSADERSTEVRPKRRKRWYGARFSQSSSA--AAG 285
S+E D + + K SSAD+ S ++R KR ++ SQ+S A
Sbjct: 121 TPDIAPTSSNEEDREGENVNEVTKVPSSADDHSPDLRQKRCRK---TSTSQASPARNIGS 177
Query: 286 TDGGGDENDSEVHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLS 345
+D +END V + + A+ L G E LAWGK G RS RHGS +GSNG+ R+ R++
Sbjct: 178 SDHSFEENDELVAAKEILATSPLRG--EMLAWGKNGTRSQNRHGS-AGSNGRIGRSGRIA 234
Query: 346 KLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQ 405
KLVD+L + +E D + ++LVL+ +D Q IP L++PYL C+PTLS++HL + +A Q + +
Sbjct: 235 KLVDHLCNADEMDKEFQLYLVLLPVDGQTIPHLEKPYLSCQPTLSIQHLVELIALQLSRK 294
Query: 406 ASEIEIYL 413
E+E+Y+
Sbjct: 295 VEELEMYI 302
>gi|147852495|emb|CAN78516.1| hypothetical protein VITISV_039748 [Vitis vinifera]
Length = 479
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 188/359 (52%), Positives = 223/359 (62%), Gaps = 59/359 (16%)
Query: 132 NNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQI----- 186
NNECPACRTHCASRRSLRDD NYDALIAALYPDIDKYEEEELAF +EE RNKQI
Sbjct: 153 NNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFHEEEQTRNKQICISAH 212
Query: 187 ---QASIAQTFQRQTEALGRKRTPKSTSA---LRRSHGRYRDTPLRGRRNYRMTELQGSD 240
QASIAQ QRQ+EAL RKRT A + RS YR+ R R+N R ++LQGSD
Sbjct: 213 LQIQASIAQILQRQSEALNRKRTLGKDIAGPFMTRSQRNYRNAYSRRRKNGRGSDLQGSD 272
Query: 241 ENDDANGD-AGKDSSSADERSTEVRPKRRKRWYGARFSQ-SSSAAAGTDGGGDENDSEVH 298
+N+D N + GK SSSA+ERSTEV+ +R KR G R Q SSS+ A +DGG END EV+
Sbjct: 273 DNEDENDNDGGKGSSSAEERSTEVKRRRYKRRAGIRLIQPSSSSVANSDGGCIENDLEVN 332
Query: 299 RESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKD 358
RES G S GL+ E LAWG+GG RSHTRHGS SG N K+AR+ RLSKLVDYL+SL E D
Sbjct: 333 RESRGFSPGLVWNPEMLAWGRGGARSHTRHGSSSGCNHKSARSTRLSKLVDYLRSLGEND 392
Query: 359 DQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELH 418
+ +YVA QT L+A E+EI +VK H
Sbjct: 393 N------------------------------------EYVALQTPLRAEEVEILVVKGCH 416
Query: 419 SKIN-LPSSSNS--------LMIDPCKDKLQVLNEQETLTGLQTQNLG-HGFLLLAYQK 467
+ P+ S S ++ DP KD+LQ+L QETL GLQ L+LAY++
Sbjct: 417 NDYQPFPNPSTSVDDLNPDPIVXDPSKDELQILEGQETLVGLQANGTSCRNQLVLAYRQ 475
>gi|297724223|ref|NP_001174475.1| Os05g0497650 [Oryza sativa Japonica Group]
gi|255676466|dbj|BAH93203.1| Os05g0497650 [Oryza sativa Japonica Group]
Length = 514
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 160/338 (47%), Positives = 221/338 (65%), Gaps = 14/338 (4%)
Query: 132 NNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIA 191
NNECPACRTHCASRRSLRDD NYDALI ALYPDIDKYEEEELAF +EE RNK+IQASIA
Sbjct: 74 NNECPACRTHCASRRSLRDDPNYDALILALYPDIDKYEEEELAFSEEERTRNKKIQASIA 133
Query: 192 QTFQRQTEALGRKRT---PKSTSALRRSHGRYRDTPLRGRRNYR-MTELQGSDENDDANG 247
+TF+RQ+EAL +KR+ ++ RR+ G R RGR + + DE+ D NG
Sbjct: 134 ETFRRQSEALVKKRSVAKATGSTITRRTRGNMR-AKRRGRTSSPDIVATDNEDEDRDENG 192
Query: 248 DAG-KDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASV 306
+ G K+SSS D+RS +VR KR +RW R S+ A + GG D + ++ G +
Sbjct: 193 NEGSKESSSVDDRSPDVRQKRVRRWPVPR-----SSPAKSIGGIDSSFEDIDDLGSGRDI 247
Query: 307 GLIGP--SERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMH 364
P E LAWGK G RS TRHG+ GS+G+ A+ R++KLV+YL++ +E D++ +++
Sbjct: 248 MSTSPLRGEMLAWGKNGTRSQTRHGNSGGSSGRMAKGGRVTKLVEYLRNTDEFDNKFNLY 307
Query: 365 LVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELHSKINLP 424
LVL+ L+ Q +P L++PYL C+PT SVRHLCQ+VA Q + A E+EI++ K ++
Sbjct: 308 LVLLPLNGQSMPKLEKPYLSCQPTFSVRHLCQFVALQLSRHAKEVEIFIRKNPNNGCFAS 367
Query: 425 SSSNSLMIDPCKDKLQVLNEQETLTGLQ-TQNLGHGFL 461
+++ I D L+ L E+++L+ L + GHG L
Sbjct: 368 IDTSADEIKLNHDALERLEEEKSLSELYPSLASGHGDL 405
>gi|4204310|gb|AAD10691.1| Hypothetical protein [Arabidopsis thaliana]
Length = 439
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 172/404 (42%), Positives = 230/404 (56%), Gaps = 59/404 (14%)
Query: 67 DGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDK 126
D E +S S+G+ + E+++V L+DI K+VQC I IIRKTRTVMECLHRFCRECIDK
Sbjct: 73 DSKERSQSSSAGELSESEYMVVDLADICKDVQCSI--WIIRKTRTVMECLHRFCRECIDK 130
Query: 127 AMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQI 186
+MRLGNNECP CR HCASRRSLRDD N+DALIAAL+ +IDK+EEEEL F+ ++ ARNKQI
Sbjct: 131 SMRLGNNECPTCRKHCASRRSLRDDPNFDALIAALFKNIDKFEEEELNFRQDDEARNKQI 190
Query: 187 QASIAQTFQRQTEAL-GRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDA 245
QASIAQ QRQ++AL RK K T+ L RS R RRN R E S+ NDD
Sbjct: 191 QASIAQVSQRQSKALVKRKSVGKGTAILSRSRRSG--GGSRRRRNCRNIEQDTSEANDDD 248
Query: 246 NGDA-GKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGA 304
+ + GKDSSS DE R KR A SS+A + G+ + R+S
Sbjct: 249 DQNKRGKDSSS-DEPCERQRKKR-----SATQPSSSNANNNDNCAGNGTEQTHQRDSRVI 302
Query: 305 SVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMH 364
S L+ SE +AWG+GG RS+TR G+ + + RN RL +LV+YL SLE
Sbjct: 303 SPVLVWNSELIAWGRGGTRSNTRQGN-NNQGAISKRNARLKRLVEYLGSLE--------- 352
Query: 365 LVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELHSKINLP 424
+ +YVA L+A E+E+ + K+ + I
Sbjct: 353 ---------------------------GNSVEYVARHLKLKAEEVELLVSKDGDTVIGNK 385
Query: 425 SSSNSLMIDPCKDKLQVLNEQETLTGLQTQNL-GHGFLLLAYQK 467
+S+ +K+Q L + ET+ L+ + +G+++L +K
Sbjct: 386 TST---------EKMQSLQDDETVAKLKVDCISSNGYMVLVPEK 420
>gi|218197034|gb|EEC79461.1| hypothetical protein OsI_20471 [Oryza sativa Indica Group]
Length = 451
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 130/197 (65%), Positives = 152/197 (77%), Gaps = 6/197 (3%)
Query: 72 DRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLG 131
D S DG+ DEF++VKL DIRKEVQCPICLGIIRKTRTVMECLHRFCR+CIDK+MRLG
Sbjct: 87 DSPSSESDGDMDEFILVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLG 146
Query: 132 NNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIA 191
NNECPACRTHCASRRSLRDD NYDALI ALYPDIDKYEEEELAF +EE RNK+IQASIA
Sbjct: 147 NNECPACRTHCASRRSLRDDPNYDALILALYPDIDKYEEEELAFSEEERTRNKKIQASIA 206
Query: 192 QTFQRQTEALGRKRT---PKSTSALRRSHGRYRDTPLRGRRNYR-MTELQGSDENDDANG 247
+TF+RQ+EAL +KR+ ++ RR+ G R RGR + + DE+ D NG
Sbjct: 207 ETFRRQSEALVKKRSVAKATGSTITRRTRGNMR-AKRRGRTSSPDIVATDNEDEDRDENG 265
Query: 248 DAG-KDSSSADERSTEV 263
+ G K+SSS D+RS +
Sbjct: 266 NEGSKESSSVDDRSPDF 282
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 353 SLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIY 412
S++++ +++LVL+ L+ Q +P L++PYL C+PT SVRHLCQ+VA Q + A E+EI+
Sbjct: 274 SVDDRSPDFNLYLVLLPLNGQSMPKLEKPYLSCQPTFSVRHLCQFVALQLSRHAKEVEIF 333
Query: 413 LVKELHSKINLPSSSNSLMIDPCKDKLQVLNEQETLTGL-QTQNLGHGFL 461
+ K ++ +++ I D L+ L E+++L+ L + GHG L
Sbjct: 334 IRKNPNNGCFASIDTSADEIKLNHDALERLEEEKSLSELYPSLASGHGDL 383
>gi|168065332|ref|XP_001784607.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663839|gb|EDQ50582.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 557
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/406 (38%), Positives = 226/406 (55%), Gaps = 92/406 (22%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDA 156
+QCPICLGIIRKTRTVMECLHRFCRECIDK+MRLGNNECPACRTHCASRRSLRDD N+DA
Sbjct: 1 MQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDA 60
Query: 157 LIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRKRTP-KSTSA--L 213
L+AA+YPD+D+YEEEELAF ++EA N+QIQA+IA TF+RQ+EA+ R+RT K+T+A +
Sbjct: 61 LVAAIYPDLDEYEEEELAFFEDEALVNRQIQANIADTFKRQSEAIARRRTASKATAAAIV 120
Query: 214 RRSHGRYRDTP----------------------------LRGRRNYRMTELQGSD----- 240
R++HG +R R R + EL S+
Sbjct: 121 RKAHGNFRSVQNRQRGRGRGSRGGRRSRSGVLCELWPRLWRNCRKLLVAELMFSEGSARY 180
Query: 241 --------ENDDANGDAGKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDE 292
++ +G D+ S E + PKRR+ ++ + ++G + +E
Sbjct: 181 EDDDDFYDDDKADTATSGDDTQSEPEPN----PKRRR-------AKVQTYSSGEENSENE 229
Query: 293 NDSEVHRESMGASVGLIG---PSERLA------------------WGKGGIRSHTRHGSV 331
+ S R+ A G P++ LA W KG RS +R+GSV
Sbjct: 230 SLSAATRDQHEAPASFSGDESPTDSLARESDADASPTNVEGMLKSWAKG-TRS-SRYGSV 287
Query: 332 SG---SNG----KNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSL-----DEQRIPGLQ 379
SG +NG K+ + + +K+D+ +HL L L DE +P L+
Sbjct: 288 SGVPVANGNRSMKSLPRTKELADALLADARADKEDEFVVHLNLQPLIDGSDDEDTLPSLK 347
Query: 380 QPYLCCRPTLSVRHLCQYVAHQTALQA-SEIEIYLVKELHSKINLP 424
+P+LCC P ++V HLC+++A + + +++EI LV+ ++++P
Sbjct: 348 RPHLCCPPKMTVHHLCKFLATRLSPPPEADLEI-LVESKTEQVSIP 392
>gi|224092904|ref|XP_002309746.1| predicted protein [Populus trichocarpa]
gi|222852649|gb|EEE90196.1| predicted protein [Populus trichocarpa]
Length = 256
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 128/230 (55%), Positives = 168/230 (73%), Gaps = 12/230 (5%)
Query: 240 DENDDANGDAGKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHR 299
DENDD + GKDSSS D+RSTEVR +RRKR R SQ SS+A ++GG END + +R
Sbjct: 31 DENDD---NIGKDSSSTDDRSTEVRQRRRKR---QRTSQPSSSAVNSEGGCAENDLDSNR 84
Query: 300 ESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDD 359
E+ G S GL+ +E LAWG+GG RSHTRHG+ SG N KN+RN RLSKLV+YL+SL+EK+D
Sbjct: 85 ENRGLSPGLVWNTEMLAWGRGGTRSHTRHGNPSGCNNKNSRNTRLSKLVEYLRSLDEKND 144
Query: 360 QLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELH- 418
+LD+HL L++LD+ P L+QPYLCCRP+LS++HLC+YVAHQT LQA E+EI LVK H
Sbjct: 145 ELDIHLKLITLDKHSAPTLKQPYLCCRPSLSIKHLCEYVAHQTTLQAEEVEILLVKGKHQ 204
Query: 419 SKINLPSSSNSLMIDPCKDKLQVLNEQETLTGLQTQ-NLGHGFLLLAYQK 467
S NLP+ + + D+LQ+L QET+ GL+ + L+LAY++
Sbjct: 205 SDENLPTKHPQIPM----DELQILKGQETVAGLKASCSSSRDHLILAYRQ 250
>gi|242039065|ref|XP_002466927.1| hypothetical protein SORBIDRAFT_01g016826 [Sorghum bicolor]
gi|241920781|gb|EER93925.1| hypothetical protein SORBIDRAFT_01g016826 [Sorghum bicolor]
Length = 207
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 129/184 (70%), Positives = 147/184 (79%), Gaps = 9/184 (4%)
Query: 82 KDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTH 141
K EFV VKL D+RKEVQCPICLGIIRKTRTVMECLHRFCRECIDK+MRLGNNECPACRTH
Sbjct: 24 KQEFVPVKLPDVRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTH 83
Query: 142 CASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEAL 201
CASRRSLRDD NYDALIAALYPDIDKYEEEELAF +EE RNKQIQASIA+ F++Q+E +
Sbjct: 84 CASRRSLRDDPNYDALIAALYPDIDKYEEEELAFNEEENDRNKQIQASIAEAFRKQSEVI 143
Query: 202 GRKRTPKSTSA--LRRSHGRYR----DTPL--RGRRNYRMTELQGSDENDDANGD-AGKD 252
GRK T K+T+A +RRS R +T RGR N L GS++ +D NG+ K+
Sbjct: 144 GRKSTAKATAAAFVRRSRRNIRPNGQNTYFRGRGRANSDDVALAGSEDEEDGNGENCSKE 203
Query: 253 SSSA 256
+SSA
Sbjct: 204 ASSA 207
>gi|413934828|gb|AFW69379.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 364
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/229 (52%), Positives = 149/229 (65%), Gaps = 29/229 (12%)
Query: 104 GIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYP 163
GIIRKTRTVMECLHRFCR+CIDK+MRLGNNECPACRTHCASRRSLRDD NYDALIAALYP
Sbjct: 122 GIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYP 181
Query: 164 DIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRKRTPKSTSA------LRRSH 217
DIDKYEEEE AF ++E +NK+IQ +I +TF+RQ++A+G+KR+ +A RR+
Sbjct: 182 DIDKYEEEEFAFSEQERIQNKKIQETIEETFRRQSDAIGKKRSMAKATATAFARKYRRTR 241
Query: 218 GRYRDTPLRGRRNYRMTELQGSDENDDANGDAG---KDSSSADERSTEVRPKR-RKRWYG 273
GR R P GS E + G++ ++ SS D+ S ++R KR RKR
Sbjct: 242 GRVRTIPPD-------ITPTGSSEEERGEGNSKETIREQSSTDDHSPDLRQKRCRKR--- 291
Query: 274 ARFSQSSSAAAGTDGGGD----ENDSEVHRESMGASVGLIGPSERLAWG 318
S + AGT G D END V + + A+ L G E LAWG
Sbjct: 292 ---SGPQGSPAGTIGSIDYSFEENDELVGGKEILATSPLQG--EMLAWG 335
>gi|77551611|gb|ABA94408.1| Zinc finger, C3HC4 type family protein [Oryza sativa Japonica
Group]
Length = 893
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 126/190 (66%), Gaps = 9/190 (4%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCAS 144
F++VKL DIRKEVQCPICLGII+K R + ECLHRFCR+CI+K+M LGN+ECPACRT AS
Sbjct: 85 FILVKLMDIRKEVQCPICLGIIQKARIITECLHRFCRDCIEKSMWLGNDECPACRT-LAS 143
Query: 145 RRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRK 204
SL+ D N+DALI LYPD+ K EEEELAF +E+ R K+IQAS + R+ EALG+K
Sbjct: 144 SHSLKVDPNFDALILTLYPDLHKDEEEELAFTEEKTCR-KKIQASTDEAPHRRKEALGKK 202
Query: 205 RTPKSTSALRRSHGRY--RDTPLRGRRNYRMTELQGSD--ENDDANGDAGKDSSSADERS 260
R+ RS G R G + +++ G D END++ D + S DE S
Sbjct: 203 RSAAKAIGSSRSQGNMLARKRGHIGFPDIVPSKVGGKDREENDNSGCD---EWSLFDEYS 259
Query: 261 TEVRPKRRKR 270
+++ KR +R
Sbjct: 260 QDIKKKRARR 269
>gi|168046374|ref|XP_001775649.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673067|gb|EDQ59596.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 812
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 82/87 (94%)
Query: 102 CLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAAL 161
C GIIRKTRTVMECLHRFCRECIDK+MRLGNNECPACRTHCASRRSLRDD N+DAL+AA+
Sbjct: 229 CEGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDALVAAI 288
Query: 162 YPDIDKYEEEELAFQDEEAARNKQIQA 188
YPD+D+YEEEELAF ++EA N+Q++A
Sbjct: 289 YPDLDEYEEEELAFFEDEALMNRQLKA 315
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
Query: 360 QLDMHLVLVSL-----DEQRIPGLQQPYLCCRPTLSVRHLCQYVAHQTALQA-SEIEIYL 413
Q +HL L L DE +P L++P+LCC P ++V HLC+++A + + +++EI L
Sbjct: 687 QFVVHLNLQPLNDGSDDEDTLPSLKRPHLCCPPNMTVHHLCKFLATRLSPPPEADLEI-L 745
Query: 414 VKELHSKINLP 424
V+ ++++P
Sbjct: 746 VESKTEQVSVP 756
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 32/180 (17%)
Query: 184 KQIQASIAQTFQRQTEALGRKRTP-KSTSA--LRRSHGRYRDT-----------PLRGRR 229
+ IQA+IA TF+RQ+EA+ R+RT K+T+A +R++HG +R R
Sbjct: 388 RHIQANIADTFKRQSEAIARRRTASKATAAAIVRKAHGNFRSVQSRQRGRGRGRRGGRRS 447
Query: 230 NYRMTELQGSDENDDANGDAGKDSSSADERSTEVRPKRRKRWY-------GARFSQSSSA 282
Y + D++D + D ++S DE +E P ++R G S++ S
Sbjct: 448 RYSEGSARYEDDDDFYDEDKADTATSGDETQSEPEPNPKRRRAKVQTYSSGEENSENESL 507
Query: 283 AAGT--------DGGGDENDSE-VHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSG 333
+A T GDE+ ++ + RES G + G +W K G RS +R+GSVSG
Sbjct: 508 SAATRDQHEAPASFSGDESPADSLARESDGDASPTNGEGTLKSWAK-GTRS-SRYGSVSG 565
>gi|302754330|ref|XP_002960589.1| hypothetical protein SELMODRAFT_8697 [Selaginella moellendorffii]
gi|300171528|gb|EFJ38128.1| hypothetical protein SELMODRAFT_8697 [Selaginella moellendorffii]
Length = 77
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 74/77 (96%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V LS+IRKE+QCPICLGIIRKTRTVMECLHRFCRECIDK+MRLGNNECPACRTHCASR
Sbjct: 1 ITVYLSEIRKEMQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 60
Query: 146 RSLRDDLNYDALIAALY 162
RSLRDD N+D+LIAALY
Sbjct: 61 RSLRDDPNFDSLIAALY 77
>gi|357475901|ref|XP_003608236.1| E3 ubiquitin-protein ligase RING1 [Medicago truncatula]
gi|87240735|gb|ABD32593.1| Zinc finger, RING-type [Medicago truncatula]
gi|355509291|gb|AES90433.1| E3 ubiquitin-protein ligase RING1 [Medicago truncatula]
Length = 252
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/99 (64%), Positives = 76/99 (76%), Gaps = 1/99 (1%)
Query: 81 EKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRT 140
EK+E+ + LS + E++CPIC GIIRKT+T+ ECLHRFC ECI+K MR G NECP CRT
Sbjct: 81 EKEEYASIDLSSMY-EIECPICFGIIRKTKTIRECLHRFCEECINKCMRFGKNECPVCRT 139
Query: 141 HCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEE 179
HC + SLRDD NYDALIA L PDIDK+E+EEL EE
Sbjct: 140 HCPDQLSLRDDPNYDALIALLCPDIDKFEKEELTLLKEE 178
>gi|413949757|gb|AFW82406.1| ribosomal protein L11 methyltransferase containing protein isoform
1 [Zea mays]
gi|413949758|gb|AFW82407.1| hypothetical protein ZEAMMB73_618249 [Zea mays]
Length = 253
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 130/197 (65%), Gaps = 9/197 (4%)
Query: 225 LRGRRNYRMT--ELQGSDENDD---ANGDAG-KDSSSADERSTEVRPKRRKRWYGARFSQ 278
+R RR R++ ++ +D +DD NGD G K+SSS D+ S +VRPKR +RW R S
Sbjct: 1 MRPRRRGRISSPDIAPTDFDDDDREENGDDGSKESSSVDDHSPDVRPKRSRRWPMPRRSP 60
Query: 279 SSSAAAGTDGGGDENDSEVHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKN 338
+ + + D +DS R+ M AS L G E LAWGK G RS TRHG+ SGS+G+
Sbjct: 61 AKAIGNTDNSIEDNDDSGGARDFMTASP-LRG--EMLAWGKNGTRSQTRHGNSSGSSGRM 117
Query: 339 ARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQYV 398
R+ R++KLVD ++ ++ D++L+++LVL+ LD Q +P L++PYL C PTLSVRHLCQ+V
Sbjct: 118 GRSGRVAKLVDQFRNADDFDNELNLYLVLLPLDGQSVPKLEKPYLSCLPTLSVRHLCQFV 177
Query: 399 AHQTALQASEIEIYLVK 415
A Q + Q E+EIY+ K
Sbjct: 178 ALQLSRQPKEVEIYIRK 194
>gi|357500025|ref|XP_003620301.1| E3 ubiquitin-protein ligase RING1 [Medicago truncatula]
gi|355495316|gb|AES76519.1| E3 ubiquitin-protein ligase RING1 [Medicago truncatula]
Length = 198
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCAS 144
+V + LS+I E++CPIC GI+RKT+T+ +CLHRFC ECI+K MR G NECP CRTHC +
Sbjct: 26 YVSIDLSNIH-EIECPICFGILRKTKTIRKCLHRFCGECIEKCMRSGKNECPICRTHCPT 84
Query: 145 RRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASI 190
+ SLRDD NYDALIA L+PDIDK+E+EELA EE ++ S+
Sbjct: 85 QLSLRDDPNYDALIALLHPDIDKFEKEELALLKEEFPHLSIVEKSV 130
>gi|222616200|gb|EEE52332.1| hypothetical protein OsJ_34363 [Oryza sativa Japonica Group]
Length = 490
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 94/127 (74%), Gaps = 2/127 (1%)
Query: 92 DIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDD 151
DIRKEVQCPICLGII+K R + ECLHRFCR+CI+K+MRLGN+ECPACRT AS SL+ D
Sbjct: 2 DIRKEVQCPICLGIIQKARIITECLHRFCRDCIEKSMRLGNDECPACRTP-ASSHSLKVD 60
Query: 152 LNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRKRTPKSTS 211
N+DALI LYPD+ K EEEELAF +E+ +K+IQAS + R+ EALG+K +
Sbjct: 61 PNFDALILTLYPDLHKDEEEELAFTEEKTC-HKKIQASTDEAPHRRKEALGKKSSAAKAI 119
Query: 212 ALRRSHG 218
RS G
Sbjct: 120 GSSRSQG 126
>gi|440791566|gb|ELR12804.1| zinc finger domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 561
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
Query: 96 EVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYD 155
E+ CPICLGI+R+T TVMECLHRFC ECI K +R G ECP CR HC+SRR LR D N+D
Sbjct: 127 ELTCPICLGIMRQTMTVMECLHRFCDECISKCLRWGKKECPTCRVHCSSRRHLRPDPNFD 186
Query: 156 ALIAALYPDIDKYEEEELAFQDEEAAR--NKQIQASIAQTFQRQTEA 200
ALIA +YP++D+YE +E F + R K + S+ + RQ A
Sbjct: 187 ALIATVYPNLDEYEAQEQEFIADINKRMNRKSLTDSVEKGLMRQMAA 233
>gi|325182454|emb|CCA16906.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 423
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 103/186 (55%), Gaps = 28/186 (15%)
Query: 87 IVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR 146
++ + D+ + CPICLG+I +T VMECLHRFC ECI K +RL ECP+CR H S+R
Sbjct: 71 VLHVRDLNSNLTCPICLGLINQTMVVMECLHRFCGECIQKCLRLAIKECPSCRIHIPSKR 130
Query: 147 SLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQR--QTEALGRK 204
+LR DLN+DALIA +YP+ ++E++E A E+ R++ + + + +R + E RK
Sbjct: 131 ALRRDLNFDALIATIYPNRQEFEQQE-AQLIEDLNRSRNYKNILTNSVKRGLENEVSTRK 189
Query: 205 RTPKSTSALRRSHGRYRDTPLRGRRNYRMT-----ELQGSDENDDANGDAGKDSSSADER 259
+ RGR++++ T S E+ D ++ + S+ + +
Sbjct: 190 Q--------------------RGRKSFKGTSRRSSSSSYSQEHLDTTSNSKSEESARESK 229
Query: 260 STEVRP 265
STE P
Sbjct: 230 STESTP 235
>gi|345486958|ref|XP_001608228.2| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Nasonia
vitripennis]
Length = 379
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 116/239 (48%), Gaps = 21/239 (8%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR--NKQIQASIAQTFQRQTEALGR 203
RSLR D N+D LI+ +YP D+YE A Q+ A+ N QA++ + + +
Sbjct: 94 RSLRPDPNFDLLISKIYPSRDEYE----AHQERVLAKLNNSHSQAALVNSITEGIKLQSQ 149
Query: 204 KRTPKSTSALRRSH-----GRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDS---SS 255
R +S Y +TP + ++++D + G G+ S S+
Sbjct: 150 NRPQRSRKNANEPENTNNTASYNNTPNVSAPTTPNPAVIAANQSDSSQGAIGQSSNGGST 209
Query: 256 ADERST-----EVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLI 309
ST PK KR + S++ S++A + GG NDS V E G+S L+
Sbjct: 210 TSRNSTTPSPVPSNPKPAKRQKSLQNSENDSSSAEAETGG--NDSMVDTEGEGSSEPLM 266
>gi|428167576|gb|EKX36533.1| hypothetical protein GUITHDRAFT_43965, partial [Guillardia theta
CCMP2712]
Length = 81
Score = 114 bits (285), Expect = 1e-22, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 57/77 (74%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALI 158
CPICL I+R T T MECLHRFC+ECI+K +RLG ECP CR +SRR+LR D +D LI
Sbjct: 1 CPICLSIVRSTHTFMECLHRFCQECIEKYLRLGQKECPKCRVKVSSRRALRADPQFDKLI 60
Query: 159 AALYPDIDKYEEEELAF 175
A YPDID YEE+E F
Sbjct: 61 QAFYPDIDAYEEKEEEF 77
>gi|357472141|ref|XP_003606355.1| E3 ubiquitin-protein ligase RING1 [Medicago truncatula]
gi|355507410|gb|AES88552.1| E3 ubiquitin-protein ligase RING1 [Medicago truncatula]
Length = 91
Score = 114 bits (284), Expect = 1e-22, Method: Composition-based stats.
Identities = 50/64 (78%), Positives = 55/64 (85%)
Query: 104 GIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYP 163
GIIRKTRT MEC+HRFC+ CIDK MR G NECP CRTH SRR+LRDD NYDALIAA+YP
Sbjct: 5 GIIRKTRTSMECMHRFCKVCIDKCMRRGTNECPTCRTHFPSRRALRDDPNYDALIAAIYP 64
Query: 164 DIDK 167
+IDK
Sbjct: 65 NIDK 68
>gi|345486956|ref|XP_003425596.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 3 [Nasonia
vitripennis]
Length = 389
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 116/249 (46%), Gaps = 31/249 (12%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR--NKQIQASIAQTFQRQTEALGR 203
RSLR D N+D LI+ +YP D+YE A Q+ A+ N QA++ + + +
Sbjct: 94 RSLRPDPNFDLLISKIYPSRDEYE----AHQERVLAKLNNSHSQAALVNSITEGIKLQSQ 149
Query: 204 KRTPKSTSALRRSH-----GRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS---- 254
R +S Y +TP + ++++D + G G+ S+
Sbjct: 150 NRPQRSRKNANEPENTNNTASYNNTPNVSAPTTPNPAVIAANQSDSSQGAIGQSSNGGSR 209
Query: 255 ---SADERSTEVR-----------PKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRE 300
S T R PK KR + S++ S++A + GG NDS V E
Sbjct: 210 ENHSTTSNGTTSRNSTTPSPVPSNPKPAKRQKSLQNSENDSSSAEAETGG--NDSMVDTE 267
Query: 301 SMGASVGLI 309
G+S L+
Sbjct: 268 GEGSSEPLM 276
>gi|307147576|gb|ADN37676.1| RING1.B [Oncorhynchus mykiss]
Length = 381
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 128/287 (44%), Gaps = 38/287 (13%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR SR
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSR 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR------NKQIQASIAQTFQRQTE 199
RSLR D N+DALI+ +YP D+YE A QD R N+ + +SI + + Q
Sbjct: 95 RSLRRDSNFDALISKIYPSRDEYE----AHQDRALERLNQQHNNRILSSSIEEGLRMQ-- 148
Query: 200 ALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSSSADE- 258
AL R+ R R P + N T G ++N D DS+ A
Sbjct: 149 ------------ALHRAQ-RVRK-PAQESDN---TTFSGGEDNGDTRSHLSHDSAPAHVL 191
Query: 259 -RSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLIGPSERLAW 317
+ P+ R +S + DGG H+ES G+ + L+ L
Sbjct: 192 LPPSHPPPEAGHTRNPKRPRESDGSVPEVDGGSPAPPVRRHKESPGSEIELVFRPHPLLV 251
Query: 318 GKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLE--EKDDQLD 362
S TR+ + NA + LSK + +LE ++D Q D
Sbjct: 252 NTQDY-SQTRYVKTTA----NATVDHLSKYLALRIALEDRQRDSQSD 293
>gi|198427593|ref|XP_002130931.1| PREDICTED: similar to ring finger protein 2 [Ciona intestinalis]
Length = 372
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL ++R T T ECLHRFC ECI A+R GN ECP CR SR
Sbjct: 37 IAVSPRSLHSELMCPICLDMLRNTMTTKECLHRFCSECITTALRSGNKECPTCRKKLVSR 96
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALIA +YP D+YE
Sbjct: 97 RSLRPDPNFDALIAKIYPSRDEYE 120
>gi|156408748|ref|XP_001642018.1| predicted protein [Nematostella vectensis]
gi|156229159|gb|EDO49955.1| predicted protein [Nematostella vectensis]
Length = 326
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 94/171 (54%), Gaps = 11/171 (6%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDL 152
+ E+ CPICL +++ T T ECLHRFC+ECI A+R GN ECP CR S+RSLR D
Sbjct: 44 LHSELMCPICLDMLKNTMTTKECLHRFCQECIITALRSGNKECPTCRKKLVSKRSLRPDP 103
Query: 153 NYDALIAALYPDIDKYE-EEELAFQDEEAARNKQ-IQASIAQTFQRQTEALGRKRTPKST 210
N+DALIA +YPD ++YE +E Q N+Q + +SI + + Q A+ R + +
Sbjct: 104 NFDALIAKIYPDREEYEAHQEKVLQRLSKHHNQQALTSSIEEGLKLQ--AMNRAQRVRKR 161
Query: 211 SALRRSHGRY------RDTPL-RGRRNYRMTELQGSDENDDANGDAGKDSS 254
S+ + H TP R R+ E S+ D+ G+A ++S
Sbjct: 162 SSEEQGHAPIAATAEGSTTPTNRKRQKANSDESDASENTFDSTGEASNEAS 212
>gi|260182163|gb|ACX35592.1| RING1 [Salmo salar]
Length = 388
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 130/291 (44%), Gaps = 46/291 (15%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR SR
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSR 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR-----NKQ-IQASIAQTFQRQTE 199
RSLR D N+DALI+ +YP D+YE A QD R NKQ + +SI + + Q
Sbjct: 95 RSLRRDSNFDALISKIYPSRDEYE----AHQDRVLERLNRLHNKQALSSSIEEGLRMQ-- 148
Query: 200 ALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSSSA--- 256
AL R+ R R P + N T G ++N DA DS+ +
Sbjct: 149 ------------ALHRAQ-RVRK-PAQESDN---TTFSGGEDNGDARSHLSHDSAPSHAP 191
Query: 257 ---DERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLIGPSE 313
+E P R + R S + DGG H+E G+ + L+
Sbjct: 192 LPPSHTPSEAGPSRNPK----RPRVSDESGPEVDGGSPTAPLRHHKEGPGSEIELVFRPH 247
Query: 314 RLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEE--KDDQLD 362
L S TR+ + NA + LSK + +LEE +D Q D
Sbjct: 248 PLLVNTQDY-SQTRYVKTTA----NATVDHLSKYLALRIALEERQRDSQSD 293
>gi|148362153|gb|ABQ59676.1| RING1 [Salmo salar]
Length = 395
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 130/291 (44%), Gaps = 46/291 (15%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR SR
Sbjct: 42 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSR 101
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR-----NKQ-IQASIAQTFQRQTE 199
RSLR D N+DALI+ +YP D+YE A QD R NKQ + +SI + + Q
Sbjct: 102 RSLRRDSNFDALISKIYPSRDEYE----AHQDRVLERLNRLHNKQALSSSIEEGLRMQ-- 155
Query: 200 ALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSSSA--- 256
AL R+ R R P + N T G ++N DA DS+ +
Sbjct: 156 ------------ALHRAQ-RVRK-PAQESDN---TTFSGGEDNGDARSHLSHDSAPSHAP 198
Query: 257 ---DERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLIGPSE 313
+E P R + R S + DGG H+E G+ + L+
Sbjct: 199 LPPSHTPSEAGPSRNPK----RPRVSDESGPEVDGGSPTAPLRHHKEGPGSEIELVFRPH 254
Query: 314 RLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEE--KDDQLD 362
L S TR+ + NA + LSK + +LEE +D Q D
Sbjct: 255 PLLVNTQDY-SQTRYVKTTA----NATVDHLSKYLALRIALEERQRDSQSD 300
>gi|397611881|gb|EJK61509.1| hypothetical protein THAOC_17988 [Thalassiosira oceanica]
Length = 581
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Query: 75 RSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE 134
R G+ + + ++DI QCPICLG I+ RTVMECLHRFC +CI+K +RLG E
Sbjct: 37 REPRRGDPSSTIRLDINDINAAFQCPICLGYIKNCRTVMECLHRFCEDCIEKYIRLGKKE 96
Query: 135 CPACRTHCASRRSLRDDLNYDALIAALYPDID---KYEEEELAFQDEEAARN 183
CP CR SRRSLR D ++DAL+ +++ D+D KY+EE++ + + R+
Sbjct: 97 CPQCRKPVPSRRSLRTDKSFDALMRSIHGDVDEIEKYQEEKIVKANMQTIRD 148
>gi|391326829|ref|XP_003737913.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Metaseiulus
occidentalis]
Length = 336
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 7/124 (5%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL I++ T T ECLHRFC++CI A+R GN ECP CR S+
Sbjct: 34 IAVSQRSLHSELMCPICLDILKTTMTTKECLHRFCQDCIITALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR-NKQIQASIAQTFQR--QTEALG 202
RSLR D N+DALIA +YP D+YE +Q+ A+ NK + A + + + +AL
Sbjct: 94 RSLRADPNFDALIAKIYPSRDEYEH----YQERVLAKLNKTCGQAFASSIEEGLKAQALS 149
Query: 203 RKRT 206
RK T
Sbjct: 150 RKMT 153
>gi|260182172|gb|ACX35600.1| RING1 [Salmo salar]
Length = 387
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR SR
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSR 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR-----NKQ-IQASIAQTFQRQTE 199
RSLR D N+DALI+ +YP D+YE A QD R NKQ + +SI + + Q
Sbjct: 95 RSLRRDSNFDALISKIYPSRDEYE----AHQDRVLERLNRLHNKQALSSSIEEGLRMQ-- 148
Query: 200 ALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSSSADER 259
AL R+ R R P + N T G ++N D DS+ +
Sbjct: 149 ------------ALHRAQ-RVRK-PAQESDN---TTFSGGEDNGDTRSHLSHDSAPSH-- 189
Query: 260 STEVRPKRRKRWYG-----ARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLIGPSER 314
+ P G R +S + DGG H+ES G+ + L+
Sbjct: 190 -APLPPSHTPSEAGHTRNPKRPRESDGSVPEVDGGSPTPPVRRHKESPGSEIELVFRPHP 248
Query: 315 LAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLE--EKDDQLD 362
L S TR+ + NA + LSK + +LE ++D Q D
Sbjct: 249 LLVNTQDY-SQTRYVKTTA----NATVDHLSKYLALRIALEDRQRDSQSD 293
>gi|291190270|ref|NP_001167351.1| E3 ubiquitin-protein ligase RING2-A [Salmo salar]
gi|223649380|gb|ACN11448.1| E3 ubiquitin-protein ligase RING2-A [Salmo salar]
Length = 388
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR SR
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSR 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR-----NKQ-IQASIAQTFQRQTE 199
RSLR D N+DALI+ +YP D+YE A QD R NKQ + +SI + + Q
Sbjct: 95 RSLRRDSNFDALISKIYPSRDEYE----AHQDRVLERLNRLHNKQALSSSIEEGLRMQ-- 148
Query: 200 ALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSSSADER 259
AL R+ R R P + N T G ++N D DS+ +
Sbjct: 149 ------------ALHRAQ-RVRK-PAQESDN---TTFSGGEDNGDTRSHLSHDSAPSH-- 189
Query: 260 STEVRPKRRKRWYG-----ARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLIGPSER 314
+ P G R +S + DGG H+ES G+ + L+
Sbjct: 190 -APLPPSHTPSEAGHTRNPKRPRESDGSVPEVDGGSPTPPVRRHKESPGSEIELVFRPHP 248
Query: 315 LAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLE--EKDDQLD 362
L S TR+ + NA + LSK + +LE ++D Q D
Sbjct: 249 LLVNTQDY-SQTRYVKTTA----NATVDHLSKYLALRIALEDRQRDSQSD 293
>gi|301101684|ref|XP_002899930.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262102505|gb|EEY60557.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 388
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDL 152
+ ++ CPICLGII++T VMECLHRFC ECI A+R N ECP+CR H S+RSLR D
Sbjct: 71 LNADLTCPICLGIIKETMVVMECLHRFCGECISTAIRHSNRECPSCRIHIPSKRSLRPDA 130
Query: 153 NYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQ------ASIAQTFQRQTEALGRKRT 206
N+DALI ++P++ ++E E E+ R + A + Q T GRK+T
Sbjct: 131 NFDALIRKIHPNLAEFERNEDQII-EKVNRTRHFHNAYTESARMGVLSQAATRRNGRKKT 189
Query: 207 PKSTSA 212
+TSA
Sbjct: 190 EGATSA 195
>gi|307174595|gb|EFN65017.1| E3 ubiquitin-protein ligase RING2 [Camponotus floridanus]
Length = 379
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 115/236 (48%), Gaps = 14/236 (5%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYE--EEELAFQDEEAARNKQIQASIAQTFQRQTEALG- 202
RSLR D N+D LI+ +YP D+YE +E + + ++ + SI + + Q++
Sbjct: 94 RSLRPDPNFDLLISKIYPSRDEYEAHQERVLAKLNKSHSQAALVNSITEGIKLQSQNRPQ 153
Query: 203 RKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDEND---------DANGDAGKDS 253
R R + S + Y +TP ++++D ++ G ++S
Sbjct: 154 RSRKNANESENASNATSYNNTPNVSAPTTPNPSTNVANQSDSSQSATGPLNSGGTTSRNS 213
Query: 254 SSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLI 309
++ PK KR + S++ S++A + GG DS V E G S L+
Sbjct: 214 TTPSPNPANQIPKAPKRQKSFQNSENDSSSAEAETGG--GDSMVDTEGEGPSEPLM 267
>gi|226469290|emb|CAX70124.1| ring finger protein 2 [Schistosoma japonicum]
gi|226486844|emb|CAX74499.1| ring finger protein 2 [Schistosoma japonicum]
Length = 472
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 74/115 (64%), Gaps = 6/115 (5%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCAS 144
+ V ++ E+ CPICL I++ T T ECLHRFC ECI A+R GN ECP CR S
Sbjct: 31 VIAVSPRSLKSELMCPICLDILKVTMTTKECLHRFCSECIITALRSGNKECPTCRKKLVS 90
Query: 145 RRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR-NKQ-IQASIAQTFQRQ 197
+RSLR D N+DALIA +YP +YE A QD+ AR N+Q + +++ ++ ++Q
Sbjct: 91 KRSLRRDPNFDALIAKIYPSRQEYE----AHQDKILARLNRQHLSSALTRSLEQQ 141
>gi|332372788|gb|AEE61536.1| unknown [Dendroctonus ponderosae]
Length = 382
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 77/129 (59%), Gaps = 5/129 (3%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC ECI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSECIITALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYE---EEELAFQDEEAARNKQIQASIAQTFQRQTEALG 202
RSLR D N+D LIA +YP D+YE E+ +A +E +R +Q SI + + Q++
Sbjct: 94 RSLRADPNFDLLIAKIYPSRDEYEAHQEKVMAKLNEFHSREAFVQ-SINEGIKLQSQNRA 152
Query: 203 -RKRTPKST 210
R R P T
Sbjct: 153 PRGRKPNET 161
>gi|322796367|gb|EFZ18908.1| hypothetical protein SINV_06659 [Solenopsis invicta]
Length = 379
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 115/236 (48%), Gaps = 14/236 (5%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYE--EEELAFQDEEAARNKQIQASIAQTFQRQTEALG- 202
RSLR D N+D LI+ +YP D+YE +E + + ++ + SI + + Q++
Sbjct: 94 RSLRPDPNFDLLISKIYPSRDEYEAHQERVLAKLNKSHSQAALVNSITEGIKLQSQNRPQ 153
Query: 203 RKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDEND---------DANGDAGKDS 253
R R + S + Y +TP ++++D ++ G ++S
Sbjct: 154 RSRKNANESENASNATSYNNTPNISAPTTPNPSSNVANQSDSSQSATGPLNSGGTTSRNS 213
Query: 254 SSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLI 309
++ PK KR + S++ S++A + GG DS V E G S L+
Sbjct: 214 TTPSPNPANQIPKPSKRQKSLQNSENDSSSAEAETGG--GDSMVDTEGEGPSEPLM 267
>gi|193688279|ref|XP_001947251.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Acyrthosiphon
pisum]
Length = 335
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 58/80 (72%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDL 152
I E+ CPICL +++KT T ECLHRFC ECI A+R GN ECP CR S+RSLR D
Sbjct: 41 IHNELMCPICLDVLKKTMTTKECLHRFCSECIVTALRSGNKECPTCRKKLVSKRSLRADP 100
Query: 153 NYDALIAALYPDIDKYEEEE 172
N+D +I+ +YP++D+YE ++
Sbjct: 101 NFDLIISKIYPNLDEYEAQQ 120
>gi|332021896|gb|EGI62232.1| E3 ubiquitin-protein ligase RING2 [Acromyrmex echinatior]
Length = 379
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 113/238 (47%), Gaps = 18/238 (7%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYE--EEELAFQDEEAARNKQIQASIAQTFQRQTEALG- 202
RSLR D N+D LI+ +YP D+YE +E + + ++ + SI + + Q++
Sbjct: 94 RSLRPDPNFDLLISKIYPSRDEYEAHQERVLAKLNKSHSQAALVNSITEGIKLQSQNRPQ 153
Query: 203 RKRTPKSTSALRRSHGRYRDTP---LRGRRNYRMTELQGSDENDDANGDAGKDSSSADER 259
R R + S + Y +TP N SD + A G +++
Sbjct: 154 RSRKNANESENASNATSYNNTPNISAPTTPNPSTNVANQSDSSQSATGPLNSGGTTSRNS 213
Query: 260 STE--------VRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLI 309
+T +P +R++ + SSSA A T GG DS V E G S L+
Sbjct: 214 TTPSPNPANQISKPSKRQKSLQNSENDSSSAEAETGGG----DSMVDTEGEGPSEPLM 267
>gi|340724527|ref|XP_003400633.1| PREDICTED: e3 ubiquitin-protein ligase RING2-A-like [Bombus
terrestris]
gi|380021048|ref|XP_003694386.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like isoform 1 [Apis
florea]
Length = 380
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 111/241 (46%), Gaps = 23/241 (9%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR-NK-QIQASIAQTFQRQTEALGR 203
RSLR D N+D LI+ +YP D+YE A Q+ A+ NK QA++ + + +
Sbjct: 94 RSLRPDPNFDLLISKIYPSRDEYE----AHQERVLAKLNKSHSQAALVNSITEGIKLQSQ 149
Query: 204 KRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDE---------------NDDANGD 248
R+ +S S T +N + N+ + G
Sbjct: 150 NRSQRSRKNANESENASNATSYNNSQNASAPATPNATNAANQSDSSQSTTGPLNNSSGGT 209
Query: 249 AGKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGL 308
++S++ PK KR + S++ S++A + GG DS V E G S L
Sbjct: 210 TSRNSTTPSPNPANQIPKPPKRQKSLQNSENDSSSAEAETGG--GDSMVDTEGEGPSEPL 267
Query: 309 I 309
+
Sbjct: 268 M 268
>gi|358338769|dbj|GAA31345.2| E3 ubiquitin-protein ligase RNF1/2 [Clonorchis sinensis]
Length = 388
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 72/114 (63%), Gaps = 6/114 (5%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V ++ E+ CPICL I++ T T ECLHRFC ECI A+R GN ECP CR S+
Sbjct: 30 IAVSPRSLKSELMCPICLDILKGTMTTKECLHRFCAECIVTALRSGNKECPTCRKKLVSK 89
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR--NKQIQASIAQTFQRQ 197
RSLR D N+DALIA +YP ++YE A QD+ A+ + A++ ++ ++Q
Sbjct: 90 RSLRRDPNFDALIAKIYPSREEYE----AHQDKILAKLNRHHLSAALTRSLEQQ 139
>gi|291229732|ref|XP_002734826.1| PREDICTED: ring finger protein 2-like [Saccoglossus kowalevskii]
Length = 300
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 71/114 (62%), Gaps = 2/114 (1%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC+ECI A+R GN ECP CR SR
Sbjct: 39 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCQECITTALRSGNKECPTCRKKLVSR 98
Query: 146 RSLRDDLNYDALIAALYPDIDKYE--EEELAFQDEEAARNKQIQASIAQTFQRQ 197
RSLR D N+DALI+ +YP D+YE +E+L + + + +Q SI + + Q
Sbjct: 99 RSLRPDPNFDALISKIYPSRDEYEAQQEKLLARLNQHHNQQALQNSIEEGLKLQ 152
>gi|350425025|ref|XP_003493989.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like [Bombus
impatiens]
Length = 380
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 111/241 (46%), Gaps = 23/241 (9%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR-NK-QIQASIAQTFQRQTEALGR 203
RSLR D N+D LI+ +YP D+YE A Q+ A+ NK QA++ + + +
Sbjct: 94 RSLRPDPNFDLLISKIYPSRDEYE----AHQERVLAKLNKSHSQAALVNSITEGIKLQSQ 149
Query: 204 KRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDE---------------NDDANGD 248
R+ +S S T +N + N+ + G
Sbjct: 150 NRSQRSRKNANESENASNATSYNNSQNASAPATPNATNAANQSDSSQSTTGPLNNSSGGT 209
Query: 249 AGKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGL 308
++S++ PK KR + S++ S++A + GG DS V E G S L
Sbjct: 210 TSRNSTTPSPNPANQIPKPPKRQKSLQNSENDSSSAEAETGG--GDSMVDTEGEGPSEPL 267
Query: 309 I 309
+
Sbjct: 268 M 268
>gi|256080096|ref|XP_002576319.1| polycomb-m33 interacting protein ring1b [Schistosoma mansoni]
gi|350646016|emb|CCD59293.1| polycomb-m33 interacting protein ring1b,putative [Schistosoma
mansoni]
Length = 460
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 74/115 (64%), Gaps = 6/115 (5%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCAS 144
+ V ++ E+ CPICL I++ T T ECLHRFC ECI A+R GN ECP CR S
Sbjct: 30 VIAVSPRSLKSELMCPICLDILKVTMTTKECLHRFCSECIITALRNGNKECPTCRKKLVS 89
Query: 145 RRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR-NKQ-IQASIAQTFQRQ 197
+RSLR D N+DALI+ +YP +YE A QD+ AR N+Q + A++ ++ ++Q
Sbjct: 90 KRSLRRDPNFDALISKIYPSRQEYE----AHQDKILARLNRQHLSAALTRSLEQQ 140
>gi|66523966|ref|XP_393984.2| PREDICTED: e3 ubiquitin-protein ligase RING2-A isoform 1 [Apis
mellifera]
Length = 403
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 111/241 (46%), Gaps = 23/241 (9%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 57 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 116
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR-NK-QIQASIAQTFQRQTEALGR 203
RSLR D N+D LI+ +YP D+YE A Q+ A+ NK QA++ + + +
Sbjct: 117 RSLRPDPNFDLLISKIYPSRDEYE----AHQERVLAKLNKSHSQAALVNSITEGIKLQSQ 172
Query: 204 KRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDE---------------NDDANGD 248
R+ +S S T +N + N+ + G
Sbjct: 173 NRSQRSRKNANESENASNATSYNNSQNASAPATPNATNAANQSDSSQSTTGPLNNSSGGT 232
Query: 249 AGKDSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGL 308
++S++ PK KR + S++ S++A + GG DS V E G S L
Sbjct: 233 TSRNSTTPSPNPANQIPKPPKRQKSLQNSENDSSSAEAETGG--GDSMVDTEGEGPSEPL 290
Query: 309 I 309
+
Sbjct: 291 M 291
>gi|345486954|ref|XP_003425595.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Nasonia
vitripennis]
Length = 401
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 114/261 (43%), Gaps = 43/261 (16%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR--NKQIQASIAQTFQRQTEALGR 203
RSLR D N+D LI+ +YP D+YE A Q+ A+ N QA++ + + +
Sbjct: 94 RSLRPDPNFDLLISKIYPSRDEYE----AHQERVLAKLNNSHSQAALVNSITEGIKLQSQ 149
Query: 204 KRTPKSTSALRRSH-----GRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDS----- 253
R +S Y +TP + ++++D + G G+ S
Sbjct: 150 NRPQRSRKNANEPENTNNTASYNNTPNVSAPTTPNPAVIAANQSDSSQGAIGQSSNGGSR 209
Query: 254 -------------------------SSADERSTEVRPKRRKRWYGARFSQSSSAAAGTDG 288
+S PK KR + S++ S++A +
Sbjct: 210 ENHSTTSNGVPQPSISPAVSGTTSRNSTTPSPVPSNPKPAKRQKSLQNSENDSSSAEAET 269
Query: 289 GGDENDSEVHRESMGASVGLI 309
GG NDS V E G+S L+
Sbjct: 270 GG--NDSMVDTEGEGSSEPLM 288
>gi|108864542|gb|ABA94487.2| Zinc finger, C3HC4 type family protein [Oryza sativa Japonica
Group]
Length = 830
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 103 LGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALY 162
L II+K R + ECLHRFCR+CI+K+MRLGN+ECPACRT AS SL+ D N+DALI LY
Sbjct: 36 LSIIQKARIITECLHRFCRDCIEKSMRLGNDECPACRTP-ASSHSLKVDPNFDALILTLY 94
Query: 163 PDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHG 218
PD+ K +EEE EE +K+IQAS + R+ EALG+K + RS G
Sbjct: 95 PDLHK-DEEEELAFTEEKTCHKKIQASTDEAPHRRKEALGKKSSAAKAIGSSRSQG 149
>gi|195997493|ref|XP_002108615.1| hypothetical protein TRIADDRAFT_19102 [Trichoplax adhaerens]
gi|190589391|gb|EDV29413.1| hypothetical protein TRIADDRAFT_19102, partial [Trichoplax
adhaerens]
Length = 152
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 61/90 (67%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC 142
D V + L + E+ CPICL I++ T T ECLHRFC ECI A+R GN ECP CR
Sbjct: 18 DSEVTISLRSLHSELMCPICLDILKSTMTTKECLHRFCAECITTALRSGNKECPTCRKKL 77
Query: 143 ASRRSLRDDLNYDALIAALYPDIDKYEEEE 172
SRRSLR D N+DALI+ +YP+ ++YE ++
Sbjct: 78 VSRRSLRPDPNFDALISKIYPNREEYEAQQ 107
>gi|390335932|ref|XP_788976.3| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like
[Strongylocentrotus purpuratus]
Length = 303
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 3/164 (1%)
Query: 55 PQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVME 114
P +S P+ + ++ E RS ++ E + S + E+ CPICL +++ T T E
Sbjct: 4 PGNSQPSKSWELSLYELHRSPQEAITDETEIAVSPRS-LHSELMCPICLDMLKNTYTTKE 62
Query: 115 CLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYE--EEE 172
CLHRFC++CI A+R GN ECP CR S+RSLR D N+DALI+ +YP D+YE +E
Sbjct: 63 CLHRFCQDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQER 122
Query: 173 LAFQDEEAARNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRS 216
+ + + + SI + + Q ++ PK+ R S
Sbjct: 123 VMAKLNKRHNTAALSTSIEEGLKVQALNRAQRVPPKAMKRPRTS 166
>gi|76157474|gb|AAX28386.2| SJCHGC04391 protein [Schistosoma japonicum]
Length = 169
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 74/115 (64%), Gaps = 6/115 (5%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCAS 144
+ V ++ E+ CPICL I++ T T ECLHRFC ECI A+R GN ECP CR S
Sbjct: 31 VIAVSPRSLKSELMCPICLDILKVTMTTKECLHRFCSECIITALRSGNKECPTCRKKLVS 90
Query: 145 RRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR-NKQ-IQASIAQTFQRQ 197
+RSLR D N+DALIA +YP +YE A QD+ AR N+Q + +++ ++ ++Q
Sbjct: 91 KRSLRRDPNFDALIAKIYPSRQEYE----AHQDKILARLNRQHLSSALTRSLEQQ 141
>gi|326437022|gb|EGD82592.1| hypothetical protein PTSG_11982 [Salpingoeca sp. ATCC 50818]
Length = 267
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 74/122 (60%), Gaps = 2/122 (1%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
V V + +EV+CPICLG+I T T M CLHRFC ECI K +RLG ECP CR ASR
Sbjct: 30 VSVPIHIFNEEVRCPICLGLIENTYTAMSCLHRFCAECIQKCLRLGKKECPTCRAPLASR 89
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDE--EAARNKQIQASIAQTFQRQTEALGR 203
R LR D +D +I+ +YP D Y+E++ A D+ E++ + + ++ + Q +A R
Sbjct: 90 RRLRRDDMFDQIISTVYPSRDIYDEQQSALVDKTLESSNRQFLVRAMVEGMMHQAKARQR 149
Query: 204 KR 205
+
Sbjct: 150 AK 151
>gi|193610656|ref|XP_001946247.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Acyrthosiphon
pisum]
Length = 335
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 59/87 (67%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC 142
D + V I+ E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR
Sbjct: 31 DTEIAVSPRSIQNELMCPICLDVLKKTMTAKECLHRFCSDCIVTALRSGNKECPTCRKKL 90
Query: 143 ASRRSLRDDLNYDALIAALYPDIDKYE 169
S+RSLR D N+D +I+ +YPD D+YE
Sbjct: 91 VSKRSLRPDPNFDLIISKIYPDRDEYE 117
>gi|380021050|ref|XP_003694387.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like isoform 2 [Apis
florea]
Length = 369
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 112/230 (48%), Gaps = 12/230 (5%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR-NK-QIQASIAQTFQRQTEALGR 203
RSLR D N+D LI+ +YP D+YE A Q+ A+ NK QA++ + + +
Sbjct: 94 RSLRPDPNFDLLISKIYPSRDEYE----AHQERVLAKLNKSHSQAALVNSITEGIKLQSQ 149
Query: 204 KRTPKSTSALRRSHGRYRDTPLRGRRNYRM----TELQGSDENDDANGDAGKDSSSADER 259
R+ +S S T +N ++++D + ++S++
Sbjct: 150 NRSQRSRKNANESENASNATSYNNSQNASAPATPNATNAANQSDSSQSTTSRNSTTPSPN 209
Query: 260 STEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGASVGLI 309
PK KR + S++ S++A + GG DS V E G S L+
Sbjct: 210 PANQIPKPPKRQKSLQNSENDSSSAEAETGG--GDSMVDTEGEGPSEPLM 257
>gi|328707142|ref|XP_001949156.2| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Acyrthosiphon
pisum]
Length = 335
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTF 194
RSLR D N+D LI+ +YP+ D+YE + E N QA++ Q+
Sbjct: 94 RSLRPDPNFDLLISKIYPNRDEYEAHQTRVL--EKLNNSHSQANLVQSI 140
>gi|443685943|gb|ELT89389.1| hypothetical protein CAPTEDRAFT_219532 [Capitella teleta]
Length = 337
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 59/87 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC+ECI A+R GN ECP CR S+
Sbjct: 32 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCQECIITALRSGNKECPTCRKKLVSK 91
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEE 172
RSLR D N+DALI+ +YP D+Y+ ++
Sbjct: 92 RSLRPDPNFDALISKIYPSRDEYDAQQ 118
>gi|307204964|gb|EFN83503.1| E3 ubiquitin-protein ligase RING1 [Harpegnathos saltator]
Length = 399
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+D LI+ +YP D+YE
Sbjct: 94 RSLRPDPNFDLLISKIYPSRDEYE 117
>gi|387019653|gb|AFJ51944.1| e3 ubiquitin-protein ligase RING2-like [Crotalus adamanteus]
Length = 336
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|301770957|ref|XP_002920895.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Ailuropoda
melanoleuca]
Length = 356
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|47497988|ref|NP_998872.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
gi|171847227|gb|AAI61443.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
gi|213624130|gb|AAI70688.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
gi|213624607|gb|AAI71333.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
Length = 336
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|224056986|ref|XP_002190866.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Taeniopygia guttata]
Length = 336
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|449277702|gb|EMC85785.1| E3 ubiquitin-protein ligase RING2 [Columba livia]
Length = 336
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|6005747|ref|NP_009143.1| E3 ubiquitin-protein ligase RING2 [Homo sapiens]
gi|332230654|ref|XP_003264507.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Nomascus
leucogenys]
gi|332811387|ref|XP_514057.3| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Pan
troglodytes]
gi|397489263|ref|XP_003815650.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Pan
paniscus]
gi|402857835|ref|XP_003893444.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Papio
anubis]
gi|426333040|ref|XP_004028095.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Gorilla
gorilla gorilla]
gi|62901044|sp|Q99496.1|RING2_HUMAN RecName: Full=E3 ubiquitin-protein ligase RING2; AltName:
Full=Huntingtin-interacting protein 2-interacting
protein 3; Short=HIP2-interacting protein 3; AltName:
Full=Protein DinG; AltName: Full=RING finger protein 1B;
Short=RING1b; AltName: Full=RING finger protein 2;
AltName: Full=RING finger protein BAP-1
gi|4769008|gb|AAD29717.1|AF141327_1 ring finger protein BAP-1 [Homo sapiens]
gi|1785643|emb|CAA71596.1| dinG [Homo sapiens]
gi|15214887|gb|AAH12583.1| Ring finger protein 2 [Homo sapiens]
gi|119611594|gb|EAW91188.1| ring finger protein 2, isoform CRA_b [Homo sapiens]
gi|123988874|gb|ABM83858.1| ring finger protein 2 [synthetic construct]
gi|123999200|gb|ABM87180.1| ring finger protein 2 [synthetic construct]
gi|189054551|dbj|BAG37324.1| unnamed protein product [Homo sapiens]
gi|208967348|dbj|BAG73688.1| ring finger protein 2 [synthetic construct]
gi|380815346|gb|AFE79547.1| E3 ubiquitin-protein ligase RING2 [Macaca mulatta]
gi|383412967|gb|AFH29697.1| E3 ubiquitin-protein ligase RING2 [Macaca mulatta]
gi|410221702|gb|JAA08070.1| ring finger protein 2 [Pan troglodytes]
gi|410263314|gb|JAA19623.1| ring finger protein 2 [Pan troglodytes]
gi|410305956|gb|JAA31578.1| ring finger protein 2 [Pan troglodytes]
gi|410331985|gb|JAA34939.1| ring finger protein 2 [Pan troglodytes]
Length = 336
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|327277423|ref|XP_003223464.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Anolis
carolinensis]
Length = 336
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|326924674|ref|XP_003208550.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Meleagris
gallopavo]
Length = 336
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|444729309|gb|ELW69733.1| E3 ubiquitin-protein ligase RING2 [Tupaia chinensis]
Length = 336
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|155372127|ref|NP_001094673.1| E3 ubiquitin-protein ligase RING2 [Bos taurus]
gi|57088937|ref|XP_537164.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Canis lupus
familiaris]
gi|194210405|ref|XP_001490057.2| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Equus caballus]
gi|354477357|ref|XP_003500887.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Cricetulus griseus]
gi|410986000|ref|XP_004001389.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING2
[Felis catus]
gi|426240030|ref|XP_004013918.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Ovis aries]
gi|151554874|gb|AAI48045.1| RNF2 protein [Bos taurus]
gi|296478860|tpg|DAA20975.1| TPA: E3 ubiquitin-protein ligase RING2 [Bos taurus]
gi|344238862|gb|EGV94965.1| E3 ubiquitin-protein ligase RING2 [Cricetulus griseus]
gi|351705546|gb|EHB08465.1| E3 ubiquitin-protein ligase RING2 [Heterocephalus glaber]
gi|440908241|gb|ELR58285.1| E3 ubiquitin-protein ligase RING2 [Bos grunniens mutus]
Length = 336
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|197097984|ref|NP_001127433.1| E3 ubiquitin-protein ligase RING2 [Pongo abelii]
gi|62900923|sp|Q5R9J5.1|RING2_PONAB RecName: Full=E3 ubiquitin-protein ligase RING2; AltName: Full=RING
finger protein 1B; Short=RING1b; AltName: Full=RING
finger protein 2
gi|55729672|emb|CAH91565.1| hypothetical protein [Pongo abelii]
Length = 336
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|148707518|gb|EDL39465.1| ring finger protein 2, isoform CRA_a [Mus musculus]
Length = 337
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 39 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 98
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 99 RSLRPDPNFDALISKIYPSRDEYE 122
>gi|126306334|ref|XP_001366901.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Monodelphis
domestica]
gi|149636359|ref|XP_001516692.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Ornithorhynchus
anatinus]
Length = 336
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|163914471|ref|NP_001106320.1| ring finger protein 2 [Xenopus laevis]
gi|160773127|gb|AAI55052.1| LOC100127274 protein [Xenopus laevis]
gi|213625992|gb|AAI69620.1| Hypothetical protein LOC100127274 [Xenopus laevis]
gi|213626554|gb|AAI69622.1| Hypothetical protein LOC100127274 [Xenopus laevis]
Length = 336
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|118094209|ref|XP_422295.2| PREDICTED: E3 ubiquitin-protein ligase RING2 [Gallus gallus]
Length = 336
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|33563274|ref|NP_035407.1| E3 ubiquitin-protein ligase RING2 [Mus musculus]
gi|296229541|ref|XP_002760304.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Callithrix
jacchus]
gi|403266315|ref|XP_003925335.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|62901047|sp|Q9CQJ4.1|RING2_MOUSE RecName: Full=E3 ubiquitin-protein ligase RING2; AltName: Full=RING
finger protein 1B; Short=RING1b; AltName: Full=RING
finger protein 2
gi|12849049|dbj|BAB28186.1| unnamed protein product [Mus musculus]
gi|12850291|dbj|BAB28663.1| unnamed protein product [Mus musculus]
gi|18043367|gb|AAH20122.1| Ring finger protein 2 [Mus musculus]
gi|26326309|dbj|BAC26898.1| unnamed protein product [Mus musculus]
gi|71059923|emb|CAJ18505.1| Rnf2 [Mus musculus]
gi|74217079|dbj|BAE26638.1| unnamed protein product [Mus musculus]
gi|148707519|gb|EDL39466.1| ring finger protein 2, isoform CRA_b [Mus musculus]
gi|149058413|gb|EDM09570.1| ring finger protein 2 [Rattus norvegicus]
Length = 336
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|417399162|gb|JAA46609.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 336
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|395530972|ref|XP_003767558.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Sarcophilus harrisii]
Length = 336
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|291412444|ref|XP_002722489.1| PREDICTED: ring finger protein 2 [Oryctolagus cuniculus]
Length = 336
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|2239142|emb|CAA73380.1| polycomb-M33 interacting protein Ring1B [Mus musculus]
Length = 339
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|355716862|gb|AES05749.1| ring finger protein 2 [Mustela putorius furo]
Length = 334
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 37 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 96
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 97 RSLRPDPNFDALISKIYPSRDEYE 120
>gi|431915925|gb|ELK16179.1| E3 ubiquitin-protein ligase RING2 [Pteropus alecto]
Length = 336
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|281353876|gb|EFB29460.1| hypothetical protein PANDA_009706 [Ailuropoda melanoleuca]
Length = 333
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|26354897|dbj|BAC41075.1| unnamed protein product [Mus musculus]
Length = 336
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|289741557|gb|ADD19526.1| putative E3 ubiquitin ligase [Glossina morsitans morsitans]
Length = 415
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC++CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCQDCIITALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIA 191
RSLR D N+D LI+ +YP ++YE A Q++ A+ Q Q+ A
Sbjct: 93 RSLRPDPNFDLLISKIYPSREEYE----AIQEKVMAKFNQTQSQQA 134
>gi|355746097|gb|EHH50722.1| hypothetical protein EGM_01592 [Macaca fascicularis]
Length = 336
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|335295881|ref|XP_003357628.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like isoform 2 [Sus
scrofa]
Length = 347
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 49 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 108
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 109 RSLRPDPNFDALISKIYPSRDEYE 132
>gi|348676854|gb|EGZ16671.1| hypothetical protein PHYSODRAFT_345983 [Phytophthora sojae]
Length = 407
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 96 EVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYD 155
++ CPICLGII++T VMECLHRFC +CI A+R ECP+CR H S+RSLR D N+D
Sbjct: 79 DLTCPICLGIIKETMVVMECLHRFCGDCISTAIRQSKRECPSCRIHIPSKRSLRPDPNFD 138
Query: 156 ALIAALYPDIDKYEE-EELAFQDEEAARN 183
ALI+ ++P++ ++E E+L Q + R+
Sbjct: 139 ALISKIHPNLAEFERNEDLIIQQQNRTRH 167
>gi|311264978|ref|XP_003130427.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like isoform 1 [Sus
scrofa]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|432881043|ref|XP_004073777.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like [Oryzias
latipes]
Length = 388
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
V V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR SR
Sbjct: 35 VAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSR 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 95 RSLRRDSNFDALISKIYPSRDEYE 118
>gi|71043690|ref|NP_001020838.1| E3 ubiquitin-protein ligase RING2 [Rattus norvegicus]
gi|90101447|sp|Q4KLY4.1|RING2_RAT RecName: Full=E3 ubiquitin-protein ligase RING2; AltName: Full=RING
finger protein 1B; Short=RING1b; AltName: Full=RING
finger protein 2
gi|68533722|gb|AAH98941.1| Ring finger protein 2 [Rattus norvegicus]
Length = 308
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|170047129|ref|XP_001851087.1| E3 ubiquitin-protein ligase RING1 [Culex quinquefasciatus]
gi|167869650|gb|EDS33033.1| E3 ubiquitin-protein ligase RING1 [Culex quinquefasciatus]
Length = 418
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+D LI+ +YP D+YE
Sbjct: 93 RSLRPDPNFDLLISKIYPSRDEYE 116
>gi|405966171|gb|EKC31483.1| E3 ubiquitin-protein ligase RING2-A [Crassostrea gigas]
Length = 332
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC++CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCQDCIITALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 94 RSLRPDPNFDALISKIYPSRDEYE 117
>gi|357620029|gb|EHJ72363.1| putative ring finger protein 2 isoform 1 [Danaus plexippus]
Length = 377
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+D LI+ +YP D+YE
Sbjct: 93 RSLRPDPNFDLLISKIYPSRDEYE 116
>gi|355558944|gb|EHH15724.1| hypothetical protein EGK_01854 [Macaca mulatta]
Length = 246
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|405976877|gb|EKC41356.1| E3 ubiquitin-protein ligase RING2-A [Crassostrea gigas]
Length = 332
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC++CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCQDCIITALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 94 RSLRPDPNFDALISKIYPSRDEYE 117
>gi|432089360|gb|ELK23311.1| E3 ubiquitin-protein ligase RING2 [Myotis davidii]
Length = 397
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 99 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 158
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 159 RSLRPDPNFDALISKIYPSRDEYE 182
>gi|157167823|ref|XP_001655936.1| ring finger protein [Aedes aegypti]
gi|108871414|gb|EAT35639.1| AAEL012209-PA [Aedes aegypti]
Length = 395
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+D LI+ +YP D+YE
Sbjct: 93 RSLRPDPNFDLLISKIYPSRDEYE 116
>gi|383865665|ref|XP_003708293.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Megachile
rotundata]
Length = 368
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+D LI+ +YP D+YE
Sbjct: 94 RSLRPDPNFDLLISKIYPSRDEYE 117
>gi|319803023|ref|NP_001188361.1| E3 ubiquitin-protein ligase RING1 [Bombyx mori]
gi|317175909|dbj|BAJ54070.1| sex combs extra [Bombyx mori]
Length = 377
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+D LI+ +YP D+YE
Sbjct: 93 RSLRPDPNFDLLISKIYPSRDEYE 116
>gi|242019424|ref|XP_002430161.1| ubiquitin ligase protein RING2-A, putative [Pediculus humanus
corporis]
gi|212515252|gb|EEB17423.1| ubiquitin ligase protein RING2-A, putative [Pediculus humanus
corporis]
Length = 352
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 36 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 95
Query: 146 RSLRDDLNYDALIAALYPDIDKYE--EEELAFQDEEAARNKQIQASIAQTFQRQTE 199
RSLR D N+D LI+ +YP D+YE +E + + ++ + +SI + + Q++
Sbjct: 96 RSLRPDPNFDLLISKIYPSRDEYEAHQERVMAKINKSHSQAALVSSITEGIKLQSQ 151
>gi|344278451|ref|XP_003411007.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Loxodonta
africana]
Length = 384
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 86 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 145
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 146 RSLRPDPNFDALISKIYPSRDEYE 169
>gi|390348740|ref|XP_792718.3| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like
[Strongylocentrotus purpuratus]
Length = 269
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Query: 57 DSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECL 116
+S P+ + ++ E RS ++ E + S + E+ CPICL +++ T T ECL
Sbjct: 9 NSQPSKSWELSLYELHRSPQEAITDETEIAVSPRS-LHSELMCPICLDMLKNTYTTKECL 67
Query: 117 HRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYE 169
HRFC++CI A+R GN ECP CR S+RSLR D N+DALI+ +YP D+YE
Sbjct: 68 HRFCQDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYE 120
>gi|348578003|ref|XP_003474773.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Cavia porcellus]
Length = 291
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 62/97 (63%), Gaps = 4/97 (4%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR 182
RSLR D N+DALI+ +YP D+YE A Q+ AR
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE----AHQERVLAR 130
>gi|198450246|ref|XP_001357898.2| GA18995 [Drosophila pseudoobscura pseudoobscura]
gi|198130953|gb|EAL27034.2| GA18995 [Drosophila pseudoobscura pseudoobscura]
Length = 439
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQA 188
RSLR D N+D LI+ +YP ++YE A Q++ A+ Q Q+
Sbjct: 93 RSLRADPNFDLLISKIYPSREEYE----AIQEKVMAKFNQTQS 131
>gi|195158327|ref|XP_002020043.1| GL13768 [Drosophila persimilis]
gi|194116812|gb|EDW38855.1| GL13768 [Drosophila persimilis]
Length = 439
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQA 188
RSLR D N+D LI+ +YP ++YE A Q++ A+ Q Q+
Sbjct: 93 RSLRADPNFDLLISKIYPSREEYE----AIQEKVMAKFNQTQS 131
>gi|118793629|ref|XP_320974.3| AGAP002073-PA [Anopheles gambiae str. PEST]
gi|116115902|gb|EAA01047.3| AGAP002073-PA [Anopheles gambiae str. PEST]
Length = 423
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+D LI+ +YP D+YE
Sbjct: 93 RSLRPDPNFDLLISKIYPSRDEYE 116
>gi|260789153|ref|XP_002589612.1| hypothetical protein BRAFLDRAFT_122927 [Branchiostoma floridae]
gi|229274792|gb|EEN45623.1| hypothetical protein BRAFLDRAFT_122927 [Branchiostoma floridae]
Length = 350
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC++CI A+R GN ECP CR S+
Sbjct: 40 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCQDCIITALRSGNKECPTCRKKLVSK 99
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 100 RSLRPDPNFDALISKIYPSRDEYE 123
>gi|195444500|ref|XP_002069895.1| GK11322 [Drosophila willistoni]
gi|194165980|gb|EDW80881.1| GK11322 [Drosophila willistoni]
Length = 421
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQA 188
RSLR D N+D LI+ +YP ++YE A Q++ A+ Q Q+
Sbjct: 93 RSLRADPNFDLLISKIYPSREEYE----ALQEKVMAKFNQTQS 131
>gi|148222454|ref|NP_001090794.1| ring finger protein 1 [Xenopus (Silurana) tropicalis]
gi|134025969|gb|AAI35192.1| ring1 protein [Xenopus (Silurana) tropicalis]
Length = 344
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR 182
RSLR D N+DALI+ +YP D+YE A QD A+
Sbjct: 95 RSLRPDPNFDALISKIYPSRDEYE----AHQDRVLAK 127
>gi|348545246|ref|XP_003460091.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like [Oreochromis
niloticus]
Length = 329
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
V V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR SR
Sbjct: 35 VAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSR 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 95 RSLRRDSNFDALISKIYPSRDEYE 118
>gi|91095245|ref|XP_970564.1| PREDICTED: similar to ring finger protein 1 [Tribolium castaneum]
gi|270017230|gb|EFA13676.1| hypothetical protein TcasGA2_TC001392 [Tribolium castaneum]
Length = 369
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYE--EEELAFQDEEAARNKQIQASIAQTFQRQTEALGR 203
RSLR D N+D LI+ +YP D+YE +E + + ++ + SI + + Q++ R
Sbjct: 94 RSLRPDPNFDLLISKIYPSRDEYEAHQERVLAKLNKSHSQAALVNSITEGIKIQSQ--NR 151
Query: 204 KRTPKSTSALRRSHGRYRDTPLRGRRN 230
+ + + R+ G + P+ N
Sbjct: 152 PNRSRKNNEVERNQGENPENPVPPNEN 178
>gi|312376122|gb|EFR23307.1| hypothetical protein AND_13125 [Anopheles darlingi]
Length = 449
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+D LI+ +YP D+YE
Sbjct: 93 RSLRPDPNFDLLISKIYPSRDEYE 116
>gi|440793647|gb|ELR14825.1| E3 ubiquitin-protein ligase RING2, putative [Acanthamoeba
castellanii str. Neff]
Length = 271
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 73/107 (68%), Gaps = 8/107 (7%)
Query: 111 TVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEE 170
T+MECLHRFC ECI K +R+G ECP CR HC+SRR LR D +DALIA++YP++D+YE
Sbjct: 2 TLMECLHRFCAECISKCLRVGKRECPTCRVHCSSRRQLRPDPEFDALIASVYPNLDEYEA 61
Query: 171 EELAFQDEEAARNKQI--QASIAQTFQRQTEALGRKRTPKSTSALRR 215
+E F A NK++ Q+ + ++ Q+ + R+R+ S +A R+
Sbjct: 62 QEEEFI---ADLNKKMSCQSHLTESVQK---GILRQRSATSAAATRK 102
>gi|194745676|ref|XP_001955313.1| GF18697 [Drosophila ananassae]
gi|190628350|gb|EDV43874.1| GF18697 [Drosophila ananassae]
Length = 432
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 64/99 (64%), Gaps = 4/99 (4%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDL 152
+ E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+RSLR D
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADP 99
Query: 153 NYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIA 191
N+D LI+ +YP ++YE A Q++ A+ Q Q+ A
Sbjct: 100 NFDLLISKIYPSREEYE----AIQEKVMAKFNQTQSQQA 134
>gi|195054989|ref|XP_001994405.1| GH17005 [Drosophila grimshawi]
gi|193892168|gb|EDV91034.1| GH17005 [Drosophila grimshawi]
Length = 437
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIA 191
RSLR D N+D LI+ +YP ++YE A Q++ A+ Q Q+ A
Sbjct: 93 RSLRADPNFDLLISKIYPSREEYE----ALQEKVMAKFNQTQSQQA 134
>gi|321459285|gb|EFX70340.1| hypothetical protein DAPPUDRAFT_202413 [Daphnia pulex]
Length = 347
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 103/215 (47%), Gaps = 33/215 (15%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRKR 205
RSLR D N+D LIA +YP D+YE A +++ A+++++
Sbjct: 94 RSLRPDPNFDMLIAKIYPSRDEYE-----------AHQERVLANLSKSH----------- 131
Query: 206 TPKSTSALRRSHGRYRDTPLRGRRNYRMTEL-QGSDENDDANGDAGKDSSSADERST--- 261
S SAL S + ++ + R T + + + EN+ AN + SA T
Sbjct: 132 ---SQSALLNS----IEEGMKIQSQNRATRIRKNAPENETANSITTTPNVSAPSTPTPTE 184
Query: 262 EVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSE 296
V ++K S++ S +G +G D +E
Sbjct: 185 SVPSSKKKPKLSTNLSENESTGSGAEGPSDHGATE 219
>gi|410924147|ref|XP_003975543.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Takifugu
rubripes]
Length = 342
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|242039063|ref|XP_002466926.1| hypothetical protein SORBIDRAFT_01g016823 [Sorghum bicolor]
gi|241920780|gb|EER93924.1| hypothetical protein SORBIDRAFT_01g016823 [Sorghum bicolor]
Length = 143
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 85/144 (59%), Gaps = 9/144 (6%)
Query: 323 RSHTRHGSVSGSNGKNARNNRLSKLVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPY 382
RS TRH S SGSNG+ + R+ KLV+ L++ ++ D + D+HL L+ LD Q P L++ Y
Sbjct: 2 RSQTRHSSFSGSNGRMVKGGRMIKLVECLRNSDDNDGERDVHLCLLPLDGQTAPNLEKSY 61
Query: 383 LCCRPTLSVRHLCQYVAHQTALQASEIEIYLVKELHSKINLPSSSNSLMIDPCK-DKLQV 441
LCC PTLS++ LCQ+VA QT+ + E+E+Y +K PS SN + +P DK ++
Sbjct: 62 LCCGPTLSIKQLCQFVASQTSHKDEEVEMYALK--------PSYSNPVSTNPSGLDKARL 113
Query: 442 LNEQETLTGLQTQNLGHGFLLLAY 465
EQ + +G L L Y
Sbjct: 114 AGEQRLSDLRSSFTFPNGVLELVY 137
>gi|90101656|sp|Q7ZWM8.2|RNG2B_XENLA RecName: Full=E3 ubiquitin-protein ligase RING2-B; AltName:
Full=RING finger protein 1B-B; Short=RING1b-B; AltName:
Full=RING finger protein 2-B
Length = 343
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR 182
RSLR D N+DALI+ +YP D+YE A QD A+
Sbjct: 94 RSLRPDPNFDALISKIYPSRDEYE----AHQDRVLAK 126
>gi|229366298|gb|ACQ58129.1| E3 ubiquitin-protein ligase RING2 [Anoplopoma fimbria]
Length = 344
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 40 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 99
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 100 RSLRPDPNFDALISKIYPSRDEYE 123
>gi|348543967|ref|XP_003459453.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Oreochromis
niloticus]
Length = 342
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|34996481|ref|NP_571288.1| E3 ubiquitin-protein ligase RING2 [Danio rerio]
gi|62901019|sp|Q803I4.1|RING2_DANRE RecName: Full=E3 ubiquitin-protein ligase RING2; AltName: Full=RING
finger protein 1B; Short=RING1b; AltName: Full=RING
finger protein 2
gi|27881923|gb|AAH44472.1| Ring finger protein 2 [Danio rerio]
gi|182890358|gb|AAI64137.1| Rnf2 protein [Danio rerio]
Length = 336
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|147899469|ref|NP_001087647.1| E3 ubiquitin-protein ligase RING2-A [Xenopus laevis]
gi|62900962|sp|Q66J69.1|RNG2A_XENLA RecName: Full=E3 ubiquitin-protein ligase RING2-A; AltName:
Full=RING finger protein 1B-A; Short=RING1b-A; AltName:
Full=RING finger protein 2-A
gi|51704098|gb|AAH81039.1| MGC81738 protein [Xenopus laevis]
Length = 344
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR 182
RSLR D N+DALI+ +YP D+YE A QD A+
Sbjct: 95 RSLRPDPNFDALISKIYPSRDEYE----AHQDRVLAK 127
>gi|327290713|ref|XP_003230066.1| PREDICTED: e3 ubiquitin-protein ligase RING2-A-like [Anolis
carolinensis]
Length = 331
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKHTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR 182
RSLR D N+DALI+ +YP D+YE A QD A+
Sbjct: 95 RSLRPDPNFDALISKIYPSRDEYE----AHQDRVLAK 127
>gi|432911762|ref|XP_004078710.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Oryzias latipes]
Length = 342
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|28422507|gb|AAH46935.1| Rnf2-b protein [Xenopus laevis]
Length = 369
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 60 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 119
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR 182
RSLR D N+DALI+ +YP D+YE A QD A+
Sbjct: 120 RSLRPDPNFDALISKIYPSRDEYE----AHQDRVLAK 152
>gi|193700165|ref|XP_001946738.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Acyrthosiphon
pisum]
Length = 338
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+D LI+ +YP D+YE
Sbjct: 94 RSLRPDPNFDLLISKIYPSRDEYE 117
>gi|194907249|ref|XP_001981516.1| GG12099 [Drosophila erecta]
gi|190656154|gb|EDV53386.1| GG12099 [Drosophila erecta]
Length = 435
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIA 191
RSLR D N+D LI+ +YP ++YE A Q++ A+ Q Q+ A
Sbjct: 93 RSLRADPNFDLLISKIYPSREEYE----AIQEKVMAKFNQTQSQQA 134
>gi|195503706|ref|XP_002098764.1| GE10548 [Drosophila yakuba]
gi|194184865|gb|EDW98476.1| GE10548 [Drosophila yakuba]
Length = 439
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIA 191
RSLR D N+D LI+ +YP ++YE A Q++ A+ Q Q+ A
Sbjct: 93 RSLRADPNFDLLISKIYPSREEYE----AIQEKVMAKFNQTQSQQA 134
>gi|47215614|emb|CAG11645.1| unnamed protein product [Tetraodon nigroviridis]
Length = 306
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 40 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 99
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 100 RSLRPDPNFDALISKIYPSRDEYE 123
>gi|2388783|emb|CAA04797.1| DRING protein [Drosophila melanogaster]
Length = 435
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIA 191
RSLR D N+D LI+ +YP ++YE A Q++ A+ Q Q+ A
Sbjct: 93 RSLRADPNFDLLISKIYPSREEYE----AIQEKVMAKFNQTQSQQA 134
>gi|195574396|ref|XP_002105175.1| GD18065 [Drosophila simulans]
gi|194201102|gb|EDX14678.1| GD18065 [Drosophila simulans]
Length = 436
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIA 191
RSLR D N+D LI+ +YP ++YE A Q++ A+ Q Q+ A
Sbjct: 93 RSLRADPNFDLLISKIYPSREEYE----AIQEKVMAKFNQTQSQQA 134
>gi|195352923|ref|XP_002042960.1| GM16329 [Drosophila sechellia]
gi|194127025|gb|EDW49068.1| GM16329 [Drosophila sechellia]
Length = 434
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIA 191
RSLR D N+D LI+ +YP ++YE A Q++ A+ Q Q+ A
Sbjct: 93 RSLRADPNFDLLISKIYPSREEYE----AIQEKVMAKFNQTQSQQA 134
>gi|17137804|ref|NP_477509.1| Sex combs extra [Drosophila melanogaster]
gi|50401702|sp|Q9VB08.1|RING1_DROME RecName: Full=E3 ubiquitin-protein ligase RING1; AltName: Full=Sex
comb extra protein; AltName: Full=dRING protein;
AltName: Full=dRING1
gi|7301619|gb|AAF56737.1| Sex combs extra [Drosophila melanogaster]
gi|16197987|gb|AAL13764.1| LD23953p [Drosophila melanogaster]
gi|220944852|gb|ACL84969.1| Sce-PA [synthetic construct]
gi|220952512|gb|ACL88799.1| Sce-PA [synthetic construct]
Length = 435
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIA 191
RSLR D N+D LI+ +YP ++YE A Q++ A+ Q Q+ A
Sbjct: 93 RSLRADPNFDLLISKIYPSREEYE----AIQEKVMAKFNQTQSQQA 134
>gi|46403229|gb|AAS92634.1| ring finger protein 2 [Danio rerio]
Length = 338
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 40 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 99
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP D+YE
Sbjct: 100 RSLRPDPNFDALISKIYPSRDEYE 123
>gi|6572993|gb|AAF17506.1|AF196346_1 Ring finger protein 1b [Danio rerio]
Length = 259
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 38 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR 182
RSLR D N+DALI+ +YP D+YE A Q+ AR
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE----AHQERVLAR 130
>gi|193643594|ref|XP_001942602.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Acyrthosiphon
pisum]
Length = 335
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 93
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+D LI+ +YP D+YE
Sbjct: 94 RSLRPDPNFDLLISKIYPSRDEYE 117
>gi|109157342|pdb|2CKL|B Chain B, Ring1b-Bmi1 E3 Catalytic Domain Structure
Length = 165
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 62/97 (63%), Gaps = 4/97 (4%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 44 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 103
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR 182
RSLR D N+DALI+ +YP D+YE A Q+ AR
Sbjct: 104 RSLRPDPNFDALISKIYPSRDEYE----AHQERVLAR 136
>gi|449682260|ref|XP_002161941.2| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Hydra
magnipapillata]
Length = 325
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDL 152
+ E+ CPICL ++ T T ECLHRFC +CI A+R GN ECP CR S+RSLR D
Sbjct: 42 LHSELMCPICLDMLTNTMTTKECLHRFCHDCIITALRAGNKECPTCRKKLISKRSLRPDP 101
Query: 153 NYDALIAALYPDIDKYE-EEELAFQDEEAARNKQ 185
N+D+LIA +YP+ D+YE +E A + N+Q
Sbjct: 102 NFDSLIAKIYPNRDEYEAHQEQALEKLHQHTNQQ 135
>gi|340375342|ref|XP_003386195.1| PREDICTED: gamma-aminobutyric acid type B receptor subunit 1-like
[Amphimedon queenslandica]
Length = 935
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 58/80 (72%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDL 152
+ E+ CPICL +++ +T ECLHRFC+ECI A+R GN ECP CR AS+RSLR D
Sbjct: 42 LHSELMCPICLDLMKNAQTTKECLHRFCQECIITALRSGNKECPTCRKKLASKRSLRSDP 101
Query: 153 NYDALIAALYPDIDKYEEEE 172
N+DALIA +YP+ D+ +++
Sbjct: 102 NFDALIAKIYPNRDELLQQQ 121
>gi|334323602|ref|XP_003340414.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
RING1-like [Monodelphis domestica]
Length = 408
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|79354820|ref|NP_174154.2| uncharacterized protein [Arabidopsis thaliana]
gi|332192832|gb|AEE30953.1| uncharacterized protein [Arabidopsis thaliana]
Length = 274
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 145/302 (48%), Gaps = 54/302 (17%)
Query: 184 KQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGR--YRDTPLRGRRNYRMTELQGSDE 241
KQ QAS QT +RQ + KR + R G+ +R P +G R R + D+
Sbjct: 7 KQGQASYMQTLKRQAKVDSGKRMSTNFVIRRDPTGQCIFRPIPFKGMRKVR----KHVDD 62
Query: 242 NDDANGDAGK--------------DSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTD 287
++ +G + K S E T +R + + R F G +
Sbjct: 63 DEGWSGGSKKVKVRGLTSSSGDGDSLSYPFENETTIRNREKDRLMLEIF--------GPE 114
Query: 288 GGGDENDSEVHRESMGASV-GLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSK 346
D ++S E M ++ L+ L WGK G RS + G+ ++ N + +
Sbjct: 115 STDDSDESGTEEEFMETNLMSLVS----LQWGKRGKRSMRK-----GTWKRHILENHVGQ 165
Query: 347 LVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQ-YVAHQTALQ 405
+ D++D+ ++LVS+D IP LQ P + C+P ++++ LC+ YVA Q
Sbjct: 166 H-------KNTQDEMDIQVLLVSMDASVIPNLQNPQVSCKPNVTLKSLCEMYVAPYVEAQ 218
Query: 406 ASEIEIYLVKELHSKINLPSSSNSLMIDPCKDKLQVLNEQETLTGLQTQNLGHGFLLLAY 465
A +IE+Y+VKEL +++ MIDP +D+++++N+++++ GL+ N +G++++ Y
Sbjct: 219 AEKIEMYVVKELVAELT--------MIDPHRDRVEIVNKEDSVGGLRMYNFNNGYVIIGY 270
Query: 466 QK 467
K
Sbjct: 271 MK 272
>gi|74207028|dbj|BAE33300.1| unnamed protein product [Mus musculus]
Length = 406
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|55978743|gb|AAV68833.1| hypothetical protein AT1G28327 [Arabidopsis thaliana]
Length = 274
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 145/302 (48%), Gaps = 54/302 (17%)
Query: 184 KQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGR--YRDTPLRGRRNYRMTELQGSDE 241
KQ QAS QT +RQ + KR + R G+ +R P +G R R + D+
Sbjct: 7 KQGQASYMQTLKRQAKVDSGKRMSXNFVIRRDPTGQCIFRPIPFKGMRKVR----KHVDD 62
Query: 242 NDDANGDAGK--------------DSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTD 287
++ +G + K S E T +R + + R F G +
Sbjct: 63 DEGWSGGSKKVKVRGLTSSSGDGDSLSYPFENETTIRNREKDRLMLEIF--------GPE 114
Query: 288 GGGDENDSEVHRESMGASV-GLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSK 346
D ++S E M ++ L+ L WGK G RS + G+ ++ N + +
Sbjct: 115 STDDSDESGTEEEFMETNLMSLVS----LQWGKRGKRSMRK-----GTWKRHILENHVGQ 165
Query: 347 LVDYLQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQ-YVAHQTALQ 405
+ D++D+ ++LVS+D IP LQ P + C+P ++++ LC+ YVA Q
Sbjct: 166 H-------KNTQDEMDIQVLLVSMDASVIPNLQNPQVSCKPNVTLKSLCEMYVAPYVEAQ 218
Query: 406 ASEIEIYLVKELHSKINLPSSSNSLMIDPCKDKLQVLNEQETLTGLQTQNLGHGFLLLAY 465
A +IE+Y+VKEL +++ MIDP +D+++++N+++++ GL+ N +G++++ Y
Sbjct: 219 AEKIEMYVVKELVAELT--------MIDPHRDRVEIVNKEDSVGGLRMYNFNNGYVIIGY 270
Query: 466 QK 467
K
Sbjct: 271 MK 272
>gi|195394708|ref|XP_002055984.1| GJ10686 [Drosophila virilis]
gi|194142693|gb|EDW59096.1| GJ10686 [Drosophila virilis]
Length = 443
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKYE--EEELAFQDEEAARNKQIQASIAQTFQRQTE 199
RSLR D N+D LI+ +YP ++YE +E++ + K + SI + + Q++
Sbjct: 93 RSLRADPNFDLLISKIYPSREEYEASQEKIMAKFNPTQSQKALVNSINEGIKLQSQ 148
>gi|226958428|ref|NP_033092.3| E3 ubiquitin-protein ligase RING1 [Mus musculus]
gi|92090635|sp|O35730.2|RING1_MOUSE RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1; AltName: Full=Transcription repressor
Ring1A
gi|74192043|dbj|BAE32956.1| unnamed protein product [Mus musculus]
Length = 406
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|402766203|ref|NP_997714.2| E3 ubiquitin-protein ligase RING1 [Rattus norvegicus]
gi|90110054|sp|Q6MGB6.2|RING1_RAT RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|149043381|gb|EDL96832.1| ring finger protein 1 [Rattus norvegicus]
Length = 406
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|296474544|tpg|DAA16659.1| TPA: ring finger protein 1 [Bos taurus]
Length = 382
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|354487574|ref|XP_003505947.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cricetulus
griseus]
gi|344252993|gb|EGW09097.1| E3 ubiquitin-protein ligase RING1 [Cricetulus griseus]
Length = 408
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|426250134|ref|XP_004018793.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Ovis aries]
Length = 392
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|351703542|gb|EHB06461.1| E3 ubiquitin-protein ligase RING1 [Heterocephalus glaber]
Length = 376
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|195113599|ref|XP_002001355.1| GI10743 [Drosophila mojavensis]
gi|193917949|gb|EDW16816.1| GI10743 [Drosophila mojavensis]
Length = 440
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++KT T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 92
Query: 146 RSLRDDLNYDALIAALYPDIDKYE--EEELAFQDEEAARNKQIQASIAQTFQRQTE 199
RSLR D N+D LI+ +YP ++YE +E++ + K + SI + + Q++
Sbjct: 93 RSLRADPNFDLLISKIYPSREEYEASQEKIMAKFNPTQSQKALVNSINEGIKLQSQ 148
>gi|440909609|gb|ELR59498.1| hypothetical protein M91_02566, partial [Bos grunniens mutus]
Length = 379
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 57/87 (65%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 59 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 118
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEE 172
RSLR D N+DALI+ +YP ++YE +
Sbjct: 119 RSLRPDPNFDALISKIYPSREEYEAHQ 145
>gi|157280011|ref|NP_001098521.1| E3 ubiquitin-protein ligase RING1 [Bos taurus]
gi|154426104|gb|AAI51292.1| RING1 protein [Bos taurus]
Length = 407
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|432094621|gb|ELK26127.1| E3 ubiquitin-protein ligase RING1 [Myotis davidii]
Length = 406
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|431916878|gb|ELK16638.1| E3 ubiquitin-protein ligase RING1 [Pteropus alecto]
Length = 406
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|395832135|ref|XP_003789131.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Otolemur garnettii]
Length = 406
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|417400362|gb|JAA47134.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 406
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|410958904|ref|XP_003986053.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Felis catus]
Length = 406
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|403261548|ref|XP_003923180.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Saimiri boliviensis
boliviensis]
Length = 406
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|51479192|ref|NP_002922.2| E3 ubiquitin-protein ligase RING1 [Homo sapiens]
gi|90110053|sp|Q06587.2|RING1_HUMAN RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1; AltName: Full=Really interesting new
gene 1 protein
gi|30354168|gb|AAH51866.1| Ring finger protein 1 [Homo sapiens]
gi|33877354|gb|AAH02922.2| Ring finger protein 1 [Homo sapiens]
gi|66347232|emb|CAI95620.1| ring finger protein 1 [Homo sapiens]
gi|158259733|dbj|BAF82044.1| unnamed protein product [Homo sapiens]
gi|208967344|dbj|BAG73686.1| ring finger protein 1 [synthetic construct]
Length = 406
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|397474342|ref|XP_003808641.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING1
[Pan paniscus]
Length = 406
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|355561586|gb|EHH18218.1| E3 ubiquitin-protein ligase RING1 [Macaca mulatta]
Length = 406
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|296197865|ref|XP_002746470.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Callithrix
jacchus]
Length = 406
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|332245586|ref|XP_003271939.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Nomascus
leucogenys]
gi|402866635|ref|XP_003897484.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Papio anubis]
gi|426352705|ref|XP_004043850.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Gorilla gorilla
gorilla]
gi|387542564|gb|AFJ71909.1| E3 ubiquitin-protein ligase RING1 [Macaca mulatta]
gi|410207298|gb|JAA00868.1| ring finger protein 1 [Pan troglodytes]
Length = 406
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|114326401|ref|NP_001041593.1| E3 ubiquitin-protein ligase RING1 [Canis lupus familiaris]
gi|90110052|sp|Q5TJF3.2|RING1_CANFA RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1; AltName: Full=RING1a
gi|55956947|emb|CAI11434.1| ring finger protein 1 [Canis lupus familiaris]
Length = 406
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|297661281|ref|XP_002809193.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Pongo
abelii]
Length = 406
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|348576400|ref|XP_003473975.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cavia porcellus]
Length = 406
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|46237549|emb|CAE83930.1| ring finger protein 1 [Rattus norvegicus]
gi|133777213|gb|AAH98635.2| Ring finger protein 1 [Rattus norvegicus]
gi|336454745|dbj|BAK40272.1| ring finger protein 1 [Rattus norvegicus]
Length = 377
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 65
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 66 RSLRPDPNFDALISKIYPSREEYE 89
>gi|301757099|ref|XP_002914380.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Ailuropoda
melanoleuca]
Length = 406
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|194223403|ref|XP_001493432.2| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Equus caballus]
Length = 406
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|298160989|ref|NP_001177164.1| E3 ubiquitin-protein ligase RING1 [Sus scrofa]
gi|147223291|emb|CAN13293.1| ring finger protein 1 [Sus scrofa]
Length = 406
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|344298828|ref|XP_003421093.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Loxodonta
africana]
Length = 406
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|395533944|ref|XP_003769009.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Sarcophilus harrisii]
Length = 481
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 108 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 167
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 168 RSLRPDPNFDALISKIYPSREEYE 191
>gi|281338470|gb|EFB14054.1| hypothetical protein PANDA_002277 [Ailuropoda melanoleuca]
Length = 404
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|355748462|gb|EHH52945.1| E3 ubiquitin-protein ligase RING1 [Macaca fascicularis]
Length = 401
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|380793389|gb|AFE68570.1| E3 ubiquitin-protein ligase RING1, partial [Macaca mulatta]
Length = 213
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 57/87 (65%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEE 172
RSLR D N+DALI+ +YP ++YE +
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYEAHQ 121
>gi|345316757|ref|XP_001506883.2| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ornithorhynchus
anatinus]
Length = 160
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 72/133 (54%), Gaps = 5/133 (3%)
Query: 51 EQQPPQDSTPAAAADVDGNESDRSRSSGDGEKD-EFVIVKLSDIRKEVQCPICLGIIRKT 109
E+ PP + + + R R+ + D + V + E+ CPICL +++ T
Sbjct: 7 ERNPPLSVAKSHSGRARADAGRRVRAPSEAIMDGTEIAVSPRSLHSELMCPICLDMLKNT 66
Query: 110 RTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYE 169
T ECLHRFC +CI A+R GN ECP CR S+RSLR D N+DALI+ +YP ++YE
Sbjct: 67 MTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYE 126
Query: 170 EEELAFQDEEAAR 182
A QD R
Sbjct: 127 ----AHQDRVLVR 135
>gi|2239144|emb|CAA73381.1| transcription repressor Ring1A [Mus musculus]
gi|3811385|gb|AAC69901.1| RING1 [Mus musculus]
gi|148678290|gb|EDL10237.1| mCG23002 [Mus musculus]
Length = 377
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 65
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 66 RSLRPDPNFDALISKIYPSREEYE 89
>gi|444729120|gb|ELW69548.1| E3 ubiquitin-protein ligase RING1 [Tupaia chinensis]
Length = 403
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 65
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 66 RSLRPDPNFDALISKIYPSREEYE 89
>gi|55956948|emb|CAI11435.1| ring finger protein 1 [Canis lupus familiaris]
Length = 377
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 65
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 66 RSLRPDPNFDALISKIYPSREEYE 89
>gi|125490343|ref|NP_001074951.1| E3 ubiquitin-protein ligase RING1 [Pan troglodytes]
gi|169234988|ref|NP_001108431.1| E3 ubiquitin-protein ligase RING1 [Macaca mulatta]
gi|73914062|sp|Q8WMN5.1|RING1_MACMU RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|146325684|sp|A1YFY1.1|RING1_PANPA RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|146325685|sp|A2T6X5.1|RING1_PANTR RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|17826764|emb|CAD18905.1| ring finger protein 1 [Macaca mulatta]
gi|121483824|gb|ABM54206.1| RING1 [Pan paniscus]
gi|124111107|gb|ABM91930.1| RING1 [Pan troglodytes]
Length = 377
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 65
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 66 RSLRPDPNFDALISKIYPSREEYE 89
>gi|355716581|gb|AES05657.1| ring finger protein 1 [Mustela putorius furo]
Length = 348
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 10 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 69
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 70 RSLRPDPNFDALISKIYPSREEYE 93
>gi|146325683|sp|A1YER5.1|RING1_GORGO RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|120974081|gb|ABM46633.1| RING1 [Gorilla gorilla]
Length = 377
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 65
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 66 RSLRPDPNFDALISKIYPSREEYE 89
>gi|296064|emb|CAA78389.1| RING1 [Homo sapiens]
gi|3820982|emb|CAA20235.1| ring finger protein 1 [Homo sapiens]
gi|30583543|gb|AAP36016.1| ring finger protein 1 [Homo sapiens]
gi|60655933|gb|AAX32530.1| ring finger protein 1 [synthetic construct]
gi|60655935|gb|AAX32531.1| ring finger protein 1 [synthetic construct]
gi|119624088|gb|EAX03683.1| ring finger protein 1, isoform CRA_a [Homo sapiens]
gi|119624089|gb|EAX03684.1| ring finger protein 1, isoform CRA_a [Homo sapiens]
gi|123989503|gb|ABM83883.1| ring finger protein 1 [synthetic construct]
gi|123999249|gb|ABM87203.1| ring finger protein 1 [synthetic construct]
Length = 377
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 65
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 66 RSLRPDPNFDALISKIYPSREEYE 89
>gi|194375029|dbj|BAG62627.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 94
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 95 RSLRPDPNFDALISKIYPSREEYE 118
>gi|255078100|ref|XP_002502630.1| predicted protein [Micromonas sp. RCC299]
gi|226517895|gb|ACO63888.1| predicted protein [Micromonas sp. RCC299]
Length = 364
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
VKL +R + +C IC G ++K + V CLHRFC+ CI++ +R N+ CP CR H SRR+
Sbjct: 3 VKLGSVRADTRCAICWGTLKKVKVVSPCLHRFCQGCIEEHLRKLNHHCPTCRLHVPSRRA 62
Query: 148 LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LRDD +DA++ ALY ++ Y+ +E A+ A K
Sbjct: 63 LRDDPGFDAIVHALYANVPDYDLQENAYSASVAQVKK 99
>gi|401409546|ref|XP_003884221.1| hypothetical protein NCLIV_046220 [Neospora caninum Liverpool]
gi|325118639|emb|CBZ54190.1| hypothetical protein NCLIV_046220 [Neospora caninum Liverpool]
Length = 1330
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 56/81 (69%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRD 150
S++R ++ CPIC+GI + V +CLHRFC +CI+K +R G ECP CR H ASRR+LR
Sbjct: 703 SELRCDLSCPICMGIFQNVVVVKDCLHRFCADCIEKCVRTGLRECPQCRIHVASRRALRP 762
Query: 151 DLNYDALIAALYPDIDKYEEE 171
D ++ ++ L+PD+ +E +
Sbjct: 763 DPTFERILNKLFPDVRAFEAK 783
>gi|71059767|emb|CAJ18427.1| Ring1 [Mus musculus]
Length = 377
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 55/84 (65%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHR C +CI A+R GN ECP CR S+
Sbjct: 6 IAVSPRSLHSELMCPICLDVLKNTMTTKECLHRLCSDCIVTALRSGNKECPTCRKKLVSK 65
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 66 RSLRPDPNFDALISKIYPSREEYE 89
>gi|237834067|ref|XP_002366331.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
gi|211963995|gb|EEA99190.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
Length = 1440
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 56/81 (69%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRD 150
S++R ++ CPIC+GI + V +CLHRFC +CI+K +R G ECP CR H ASRR+LR
Sbjct: 642 SELRCDLSCPICMGIFQNVVVVKDCLHRFCADCIEKCVRTGLRECPQCRIHVASRRALRP 701
Query: 151 DLNYDALIAALYPDIDKYEEE 171
D ++ ++ L+PD+ +E +
Sbjct: 702 DPIFERILNKLFPDVSAFEAK 722
>gi|14290582|gb|AAH09070.1| Ring finger protein 1 [Mus musculus]
Length = 377
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 55/84 (65%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHR C +CI A+R GN ECP CR S+
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRLCSDCIVTALRSGNKECPTCRKKLVSK 65
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 66 RSLRPDPNFDALISKIYPSREEYE 89
>gi|63169173|gb|AAY34709.1| ring finger protein 1 [Bos taurus]
gi|124054128|gb|ABM89251.1| RING1 [Pongo pygmaeus]
Length = 122
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 65
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR 182
RSLR D N+DALI+ +YP ++YE A QD R
Sbjct: 66 RSLRPDPNFDALISKIYPSREEYE----AHQDRVLIR 98
>gi|326437562|gb|EGD83132.1| ring finger protein 1 [Salpingoeca sp. ATCC 50818]
Length = 348
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 9/126 (7%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC 142
+E + ++ +++CPICL +I +T EC+HRFC ECI +++R ECP CR C
Sbjct: 21 EEMIETYWPELVAQMKCPICLNLIEET-MATECMHRFCGECIKRSLRHSKKECPTCRKPC 79
Query: 143 ASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQI--QASIAQTFQR--QT 198
AS+R LR D N+D LI L+PD D E+ +Q++ R Q ++AQ+ Q Q
Sbjct: 80 ASKRVLRRDPNFDELIQTLFPDPDVVED----YQEQLMERLHQTTNMRAVAQSMQEGMQH 135
Query: 199 EALGRK 204
+AL RK
Sbjct: 136 QALQRK 141
>gi|339243901|ref|XP_003377876.1| ATPase, AAA family [Trichinella spiralis]
gi|316973259|gb|EFV56879.1| ATPase, AAA family [Trichinella spiralis]
Length = 1151
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 98 QCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDAL 157
CPICL +++ T T ECLHRFC++CI A+R GN ECP CR S+RSLR D N+D +
Sbjct: 55 MCPICLDMLKNTMTTKECLHRFCQDCITTALRSGNKECPTCRCKLVSKRSLRPDPNFDGI 114
Query: 158 IAALYPDIDKYEEEELAFQDEEAARNKQI--QASI--AQTFQRQTEALGR 203
I +YP ++Y+ E D+ + I Q SI FQ Q L R
Sbjct: 115 ITKIYPSREEYDAMEAEAFDKMKKHHSTISLQRSIQEGMKFQSQLRRLNR 164
>gi|320162947|gb|EFW39846.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 309
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDA 156
+QCP+CL +I+ +ECLHRFC ECI A+R+G +CP+CR +RRSLR D N D
Sbjct: 54 LQCPVCLCLIQNAHGNIECLHRFCEECITSAVRMGPKQCPSCRGSLPTRRSLRHDSNLDQ 113
Query: 157 LIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQ 197
L+AA+Y D +++E+++ + E+ R KQ Q + + +R+
Sbjct: 114 LVAAMYGDHEQFEKQQNEYSAEQ-IRRKQAQTLVLKLPRRE 153
>gi|52350624|gb|AAH82771.1| Ring1 protein [Mus musculus]
Length = 154
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 62/102 (60%), Gaps = 4/102 (3%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 65
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQ 187
RSLR D N+DALI+ +YP ++YE A QD R ++
Sbjct: 66 RSLRPDPNFDALISKIYPSREEYE----AHQDRVLIRLSRLH 103
>gi|343781184|pdb|3RPG|C Chain C, Bmi1RING1B-Ubch5c Complex Structure
Length = 121
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 43 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 102
Query: 146 RSLRDDLNYDALIAALYP 163
RSLR D N+DALI+ +YP
Sbjct: 103 RSLRPDPNFDALISKIYP 120
>gi|224000760|ref|XP_002290052.1| hypothetical protein THAPSDRAFT_268817 [Thalassiosira pseudonana
CCMP1335]
gi|220973474|gb|EED91804.1| hypothetical protein THAPSDRAFT_268817 [Thalassiosira pseudonana
CCMP1335]
Length = 331
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLG-NNECPACRTHCAS 144
V V+L + E CP+CL I++TR V ECLHRFC ECI K +R+ ECP CR H S
Sbjct: 86 VRVQLKVLSPEFHCPVCLSYIKQTRIVKECLHRFCNECIQKCLRVSPKKECPQCRVHIPS 145
Query: 145 RRSLRDDLNYDALIAALY 162
RRSLR D N+D LI ++Y
Sbjct: 146 RRSLRPDPNFDNLIKSIY 163
>gi|167521153|ref|XP_001744915.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776529|gb|EDQ90148.1| predicted protein [Monosiga brevicollis MX1]
Length = 91
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 51/71 (71%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALI 158
C +CL ++ T T+ ECLHRFC +CI+K++RLG ECP CRT C SRRSLR D D +I
Sbjct: 1 CAVCLNLLENTMTMKECLHRFCNDCIEKSLRLGRKECPTCRTSCPSRRSLRHDARIDGII 60
Query: 159 AALYPDIDKYE 169
ALYPD +YE
Sbjct: 61 HALYPDRQEYE 71
>gi|429329911|gb|AFZ81670.1| hypothetical protein BEWA_010870 [Babesia equi]
Length = 301
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 52/80 (65%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRD 150
S +R E+ C IC GI+ K + CLHRFC CI+K +R+G ECP CR H SRR L+
Sbjct: 50 SGLRDEISCAICSGIVHKCVVIKTCLHRFCSSCIEKCVRIGLRECPKCRKHVPSRRFLKP 109
Query: 151 DLNYDALIAALYPDIDKYEE 170
D YD++I+ L P++ +EE
Sbjct: 110 DPIYDSIISRLIPNVKVFEE 129
>gi|193652565|ref|XP_001945787.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Acyrthosiphon
pisum]
Length = 332
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC 142
D + V L I K++ CPICL ++ KT +CLHRFC ECI A+R GN +CP CR
Sbjct: 32 DTEIEVPLESIHKDLMCPICLELLNKTMAT-KCLHRFCSECIVTALRAGNKKCPTCRKRL 90
Query: 143 ASRRSLRDDLNYDALIAALYPDIDKYEE 170
S+R LR D N D LI+ L+P+ +++ E
Sbjct: 91 ISKRCLRPDHNIDLLISKLFPNREEFNE 118
>gi|323454311|gb|EGB10181.1| hypothetical protein AURANDRAFT_9162, partial [Aureococcus
anophagefferens]
Length = 58
Score = 91.3 bits (225), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/58 (65%), Positives = 46/58 (79%)
Query: 105 IIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALY 162
I+ KT+ VMECLHRFC ECI K +R+G NECP+CR H SRRSLR D N+DALI+ +Y
Sbjct: 1 ILHKTKIVMECLHRFCSECIQKCLRVGKNECPSCRIHVPSRRSLRPDPNFDALISKIY 58
>gi|170594563|ref|XP_001902033.1| ring finger protein 1 [Brugia malayi]
gi|158590977|gb|EDP29592.1| ring finger protein 1, putative [Brugia malayi]
Length = 494
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 70/130 (53%), Gaps = 13/130 (10%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDL 152
+ E+ CPICL ++ T T ECLHRFC ECI A+ GN ECP CR S+RSLR D
Sbjct: 44 LSSELCCPICLDLLTTTMTTKECLHRFCSECITTALLRGNKECPTCRKKLVSKRSLRPDP 103
Query: 153 NYDALIAALYPDIDKYEE------EELAFQDEEAARNKQIQASI-AQTFQRQTEALG--- 202
N+DALI ++PD YE+ E Q A K I+A + AQ R+ G
Sbjct: 104 NFDALINKIWPDRQIYEQMQQKAMEMFHQQSNVEALQKSIEAGMKAQAANRRQRVQGSYD 163
Query: 203 ---RKRTPKS 209
RKR P+S
Sbjct: 164 YEKRKRRPRS 173
>gi|312067777|ref|XP_003136903.1| ring finger protein 1 [Loa loa]
Length = 515
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 75/144 (52%), Gaps = 20/144 (13%)
Query: 86 VIVKLSDIR-------KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
I L++IR E+ CPICL ++ T T ECLHRFC ECI A+ GN ECP C
Sbjct: 30 AISDLTEIRISTRMLSSELCCPICLDLLTTTMTTKECLHRFCSECITTALLRGNKECPTC 89
Query: 139 RTHCASRRSLRDDLNYDALIAALYPDIDKYEE------EELAFQDEEAARNKQIQASI-A 191
R S+RSLR D N+DALI ++PD YE+ E Q A K I+A + A
Sbjct: 90 RKKLVSKRSLRPDPNFDALINKIWPDRQIYEQMQQKAMEMFHQQSNVEALQKSIEAGMKA 149
Query: 192 QTFQRQTEALG------RKRTPKS 209
Q R+ G RKR P+S
Sbjct: 150 QAANRRQRVQGSYDYEKRKRRPRS 173
>gi|402586446|gb|EJW80384.1| hypothetical protein WUBG_08707 [Wuchereria bancrofti]
Length = 492
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 70/130 (53%), Gaps = 13/130 (10%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDL 152
+ E+ CPICL ++ T T ECLHRFC ECI A+ GN ECP CR S+RSLR D
Sbjct: 44 LSSELCCPICLDLLTTTMTTKECLHRFCSECITTALLRGNKECPTCRKKLVSKRSLRPDP 103
Query: 153 NYDALIAALYPDIDKYEE------EELAFQDEEAARNKQIQASI-AQTFQRQTEALG--- 202
N+DALI ++PD YE+ E Q A K I+A + AQ R+ G
Sbjct: 104 NFDALINKIWPDRQIYEQMQQKAMEMFHQQSNVEALQKSIEAGMKAQAANRRQRVQGSYD 163
Query: 203 ---RKRTPKS 209
RKR P+S
Sbjct: 164 YEKRKRRPRS 173
>gi|393912535|gb|EFO27171.2| ring finger protein 1 [Loa loa]
Length = 491
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 75/144 (52%), Gaps = 20/144 (13%)
Query: 86 VIVKLSDIR-------KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
I L++IR E+ CPICL ++ T T ECLHRFC ECI A+ GN ECP C
Sbjct: 30 AISDLTEIRISTRMLSSELCCPICLDLLTTTMTTKECLHRFCSECITTALLRGNKECPTC 89
Query: 139 RTHCASRRSLRDDLNYDALIAALYPDIDKYEE------EELAFQDEEAARNKQIQASI-A 191
R S+RSLR D N+DALI ++PD YE+ E Q A K I+A + A
Sbjct: 90 RKKLVSKRSLRPDPNFDALINKIWPDRQIYEQMQQKAMEMFHQQSNVEALQKSIEAGMKA 149
Query: 192 QTFQRQTEALG------RKRTPKS 209
Q R+ G RKR P+S
Sbjct: 150 QAANRRQRVQGSYDYEKRKRRPRS 173
>gi|109158141|pdb|2H0D|B Chain B, Structure Of A Bmi-1-Ring1b Polycomb Group Ubiquitin
Ligase Complex
Length = 100
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 24 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 83
Query: 146 RSLRDDLNYDALIAALY 162
RSLR D N+DALI+ +Y
Sbjct: 84 RSLRPDPNFDALISKIY 100
>gi|148910395|gb|ABR18274.1| unknown [Picea sitchensis]
Length = 169
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Query: 327 RHGSVSGSNGKNARNNRLSKLVDYLQSL--EEKDDQLDMHLVLV-SLDEQRIPGLQQPYL 383
R+GSVSGSN KNAR R++K+V+YL S EE +++ D+ L+ S +++ +P L+ PYL
Sbjct: 2 RYGSVSGSNSKNARGMRVAKMVNYLLSKAREEDENEFDIQFTLLPSENDENLPSLETPYL 61
Query: 384 CCRPTLSVRHLCQYVAHQTALQASEIEIYLVKE 416
CC PT+SV HLC+ +A Q +L A ++EI + K+
Sbjct: 62 CCSPTVSVNHLCKLLALQLSLPAEDLEIVVEKQ 94
>gi|66359826|ref|XP_627091.1| RING finger containing protein [Cryptosporidium parvum Iowa II]
gi|46228519|gb|EAK89389.1| RING finger containing protein [Cryptosporidium parvum Iowa II]
Length = 302
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRD 150
+D+ + C IC I+++T V +CLHRFC ECI+K +R+G ECP CR H ASRRSLR+
Sbjct: 71 NDLYSDFNCLICFRILQRTMVVKDCLHRFCGECIEKCVRIGLRECPQCRLHIASRRSLRN 130
Query: 151 DLNYDALIAALYPDIDKYE 169
D D L L+P+ ++E
Sbjct: 131 DSIMDTLTLRLFPEASEFE 149
>gi|209876968|ref|XP_002139926.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
gi|209555532|gb|EEA05577.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
Length = 304
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRD 150
+D+ + C IC I+R+T V +CLHRFC CI+K +R+G ECP CR H ASRRSLR
Sbjct: 72 NDLYSDFNCSICFKILRRTMVVKDCLHRFCNSCIEKCVRIGLRECPQCRLHIASRRSLRS 131
Query: 151 DLNYDALIAALYPDIDKYEE--EELAFQD 177
D D + + L+P + ++E+ EE+ ++
Sbjct: 132 DSIMDTVASRLFPKVAEFEKQHEEMVIEN 160
>gi|403223591|dbj|BAM41721.1| uncharacterized protein TOT_040000102 [Theileria orientalis strain
Shintoku]
Length = 298
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRD 150
S +R+E+ CPIC GI+ + + CLHRFC CI K +R+G +ECP CR H S+R L+
Sbjct: 50 SGLREEISCPICSGIVLRCVVIKTCLHRFCLNCIQKCVRIGLHECPKCRKHVPSKRFLKA 109
Query: 151 DLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQ 187
D YD++I+ + +++ +E+ AF A NK I+
Sbjct: 110 DPIYDSIISRIVTNVEIFEKLSDAFT---VAINKGIK 143
>gi|297845774|ref|XP_002890768.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336610|gb|EFH67027.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 210
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 26/179 (14%)
Query: 291 DENDSEVHRESMGASVGLIGPSERLAWGKGGIRSHTRHGSVSGSNGKNARNNRLSKLVDY 350
DEN SE E M ++ + P E L WGK G RS SG+ ++ N +
Sbjct: 49 DENGSE--EEFMETNLLPLVPLESLKWGKRGKRSMR-----SGTCKRHMLENHVE----- 96
Query: 351 LQSLEEKDDQLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVRHLCQ-YVAHQTALQASEI 409
+ K++++D+ ++LVS+D IP LQ P + C+P ++++ LC+ YVA Q EI
Sbjct: 97 ----QHKNNEMDIQVLLVSMDTSVIPNLQNPQVSCKPNVTMKSLCEMYVAPYVEAQVEEI 152
Query: 410 EIYLVKELHSKINLPSSSNSLMIDPCKDKLQVLNEQETLTGL-QTQNLGHGFLLLAYQK 467
E+++V EL + S +IDP KD++Q++ +++ + GL + + G +++ Y K
Sbjct: 153 EMFVVNEL--------VTESRVIDPHKDRVQIVKKEDNVGGLMRMYDFNKGHVIIGYMK 203
>gi|324509377|gb|ADY43948.1| E3 ubiquitin-protein ligase RING2 [Ascaris suum]
Length = 524
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 70/130 (53%), Gaps = 13/130 (10%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDL 152
+ E+ CPICL ++ T T ECLHRFC ECI A+ GN ECP CR S+RSLR D
Sbjct: 45 LSAELCCPICLDLLTTTMTTKECLHRFCSECITTALLRGNKECPTCRKKLVSKRSLRPDP 104
Query: 153 NYDALIAALYPDIDKYEEEE------LAFQDEEAARNKQIQASI-AQTFQRQTEALG--- 202
N+DALI ++PD YE+ + Q A K I+A + AQ R+ G
Sbjct: 105 NFDALINKIWPDRQIYEQMQQKAMDIFHQQSNVEALQKSIEAGMKAQAANRRQRVQGSYD 164
Query: 203 ---RKRTPKS 209
RKR P++
Sbjct: 165 YERRKRRPRA 174
>gi|84997477|ref|XP_953460.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304456|emb|CAI76835.1| hypothetical protein, conserved [Theileria annulata]
Length = 286
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Query: 70 ESDRSRSSGDGEKDEFVIVKLSD--IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA 127
E R+ + D EK + + L+D +R+E+ C IC GII K + CLHRFC CI+K
Sbjct: 27 EVLRTPRTVDTEKFDRLETTLNDSGLREELTCAICSGIISKCVVIKTCLHRFCSNCIEKC 86
Query: 128 MRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEE 170
+R+G CP CR H SRR R+D YD+LI+ + +++ +EE
Sbjct: 87 VRVGTRGCPKCRKHVPSRRFFRNDPIYDSLISRIISNVEVFEE 129
>gi|71029646|ref|XP_764466.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351420|gb|EAN32183.1| hypothetical protein TP04_0829 [Theileria parva]
Length = 301
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRD 150
S +R+E+ C IC GII K + CLHRFC CI+K +R+G CP CR H SRR R
Sbjct: 50 SGLREELTCAICSGIISKCVVIKTCLHRFCSNCIEKCVRVGTRGCPKCRKHVPSRRFFRT 109
Query: 151 DLNYDALIAALYPDIDKYEE 170
D YD+LI+ + +++ +EE
Sbjct: 110 DPIYDSLISRIITNVEVFEE 129
>gi|145478225|ref|XP_001425135.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392203|emb|CAK57737.1| unnamed protein product [Paramecium tetraurelia]
Length = 273
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 11/129 (8%)
Query: 73 RSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGN 132
R+ D E + + K+ D E+QCPICL + + + +C HRFC+ECI+K++R
Sbjct: 32 RALIDSDKEPTDHQVAKIFD---ELQCPICLSLFEQPVYIKDCSHRFCKECIEKSIRFQR 88
Query: 133 NE-CPACRTHCASRRSLRDDLNYDALIAALYPDIDKYE-EEELAFQDE------EAARNK 184
+ CP CR A+RR LR D + ++ + PDI +Y +EEL Q E + +N
Sbjct: 89 EKSCPTCRKKIATRRDLRVDEVVNKILNTVVPDIKQYRMQEELLIQQEIKNFRQQKQKND 148
Query: 185 QIQASIAQT 193
++Q +AQT
Sbjct: 149 KLQKFVAQT 157
>gi|313224953|emb|CBY20745.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 44/62 (70%)
Query: 111 TVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEE 170
T ECLHRFC+ECI A+R GN ECP CR SRRSLR D +DALIA LYP D+YE+
Sbjct: 2 TTKECLHRFCQECITTALRSGNKECPTCRKRLVSRRSLRHDPIFDALIAKLYPARDEYEK 61
Query: 171 EE 172
+
Sbjct: 62 HQ 63
>gi|449267318|gb|EMC78279.1| E3 ubiquitin-protein ligase RING2-A, partial [Columba livia]
Length = 124
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 47/72 (65%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECLHRFC +CI A+R GN ECP CR S+
Sbjct: 10 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK 69
Query: 146 RSLRDDLNYDAL 157
RSLR D N+DAL
Sbjct: 70 RSLRPDPNFDAL 81
>gi|403335250|gb|EJY66800.1| Zinc finger (C3HC4 RING finger) protein, putative [Oxytricha
trifallax]
Length = 642
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 59/110 (53%)
Query: 73 RSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGN 132
R + D + +E + +DI++ + CP+CL I++ V CLH+FC CI+ RL
Sbjct: 74 RRLENEDFDNNEIDLKSFTDIKEILHCPVCLDILKDPLNVKMCLHKFCAHCIENYNRLIK 133
Query: 133 NECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR 182
+CP CR + SRR LR D +I AL DID + + E + EE +
Sbjct: 134 KQCPQCRKYIGSRRLLRSDYKLAYIIKALITDIDAFNKFEEQARKEEVPK 183
>gi|384246349|gb|EIE19839.1| hypothetical protein COCSUDRAFT_58076 [Coccomyxa subellipsoidea
C-169]
Length = 263
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN-ECPACRTHCASRR 146
+ LS + E +C +CLGI++ R V C+HRFC +CI+K +R+ + CP CR SRR
Sbjct: 3 IDLSSLEAETRCSVCLGIVKSCRLVSGCMHRFCADCIEKWLRVASEPSCPQCRVQMQSRR 62
Query: 147 SLRDDLNYDALIAALYPDIDKYEEE 171
+ D+ +D L+ LY ++ YE +
Sbjct: 63 DCKRDVRFDRLLKLLYTNLRSYEAQ 87
>gi|145552431|ref|XP_001461891.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429728|emb|CAK94518.1| unnamed protein product [Paramecium tetraurelia]
Length = 276
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 68/113 (60%), Gaps = 8/113 (7%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE-CPACRTHCASRRS 147
+L I+ ++CPICL + ++ + +C HRFC+ECI+K++R + CP CR A+RR
Sbjct: 45 QLVKIQDYLKCPICLSLFKQAVYIKDCSHRFCKECIEKSIRSQREKSCPTCRKKIATRRD 104
Query: 148 LRDDLNYDALIAALYPDIDKYE-EEELAFQDE------EAARNKQIQASIAQT 193
LR D ++ + PD+++Y +E+L Q E + +N++IQ ++QT
Sbjct: 105 LRVDEIVSKMLNTVVPDMEQYRIQEDLQIQQEIKNFSQQKQKNEEIQKLVSQT 157
>gi|119579142|gb|EAW58738.1| hCG1642036 [Homo sapiens]
Length = 138
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
++V + ++ CPICL +++ T T E LHRFC +C A+R GN EC C S+
Sbjct: 17 IVVSPRSLHSDLMCPICLDMLKNTMTTKESLHRFCADCNIIALRSGNKECLTCWKKLVSK 76
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RS R D +DALI+ +YP D+YE
Sbjct: 77 RSPRPDPKFDALISKIYPSRDEYE 100
>gi|399218630|emb|CCF75517.1| unnamed protein product [Babesia microti strain RI]
Length = 310
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRD 150
S +R + C IC GII+ + CLHRFC CI+K R G ECP CR H S+R L
Sbjct: 49 SGLRDHLCCVICSGIIQNCVVIKTCLHRFCSTCIEKCFRSGIRECPQCRKHVPSKRFLHH 108
Query: 151 DLNYDALIAALYPDIDKYEEEELAFQD 177
D +D++I L+P++ K + ++ F +
Sbjct: 109 DAIFDSIITTLFPNV-KVTDLDIIFDN 134
>gi|428181687|gb|EKX50550.1| hypothetical protein GUITHDRAFT_66750, partial [Guillardia theta
CCMP2712]
Length = 117
Score = 79.3 bits (194), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDL 152
I + C IC+ II +T + +CLHRFC +CI + +R ECP+CRT AS+R L D
Sbjct: 21 IDSDFTCAICMNIISETTIITDCLHRFCADCITQCLRHSKRECPSCRTPVASQRKLVRDA 80
Query: 153 NYDALIAALYPDIDKYEE------EELAFQD 177
++D +I +Y D+ + E E AF D
Sbjct: 81 DFDTMICKMYRDVSELREIQDVKAAEFAFSD 111
>gi|412992642|emb|CCO18622.1| predicted protein [Bathycoccus prasinos]
Length = 666
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 92 DIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDD 151
D+R + +C IC G ++ TV CLHRFC +C+ +++R CP CR ASRR D
Sbjct: 88 DVRADTRCSICWGTVKNCVTVRVCLHRFCNDCVQESIRKNQMCCPECRAKVASRRDFVKD 147
Query: 152 LNYDALIAALYP---DIDKYEEEELAFQDEEA 180
+DA+++A+Y + Y+E+E F +EA
Sbjct: 148 PKFDAIVSAIYAAKGGAESYDEKEERFSRKEA 179
>gi|302854907|ref|XP_002958957.1| hypothetical protein VOLCADRAFT_108389 [Volvox carteri f.
nagariensis]
gi|300255703|gb|EFJ39992.1| hypothetical protein VOLCADRAFT_108389 [Volvox carteri f.
nagariensis]
Length = 663
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 101 ICLGIIRKTRTVMECLHRFCRECIDKAMR---LGNNECPACRTHCASRRSLRDDLNYDAL 157
+C GI+++T T CLHRFC CIDK + + +CP CR + SRRSLR D N+D L
Sbjct: 178 VCCGILKETVTSTVCLHRFCAACIDKCLAGRPPQHKDCPVCRANLHSRRSLRPDPNFDRL 237
Query: 158 IAALYPDIDKY--EEEELAFQDEEAARNKQIQASIAQTFQRQTE 199
+ ALY D+ Y +E+ L A +A AQ + Q+E
Sbjct: 238 LRALYGDVVVYGQQEDSLVAAHNRAVAQAAREAQTAQLSRAQSE 281
>gi|67594414|ref|XP_665797.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656638|gb|EAL35571.1| hypothetical protein Chro.80216, partial [Cryptosporidium hominis]
Length = 132
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 44/61 (72%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRD 150
+D+ + C IC I+++T V +CLHRFC ECI+K +R+G ECP CR H ASRRSLR+
Sbjct: 71 NDLYSDFNCLICFRILQRTMVVKDCLHRFCGECIEKCVRIGLRECPQCRLHIASRRSLRN 130
Query: 151 D 151
D
Sbjct: 131 D 131
>gi|303289823|ref|XP_003064199.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454515|gb|EEH51821.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 71
Score = 76.6 bits (187), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+KL D+R + +C +C G ++K + V CLHRFC CI++ +R NN CP CR ASRR
Sbjct: 8 LKLGDVRPDTRCAVCWGTLKKVKVVSPCLHRFCGACIEEHIRKLNNHCPTCRVPVASRRV 67
Query: 148 LRDD 151
LR+D
Sbjct: 68 LRED 71
>gi|301780836|ref|XP_002925842.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
RING2-like [Ailuropoda melanoleuca]
Length = 359
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNEC-------- 135
EFV+ S + E CP+C+ ++ T T E L FC EC A+ GN EC
Sbjct: 37 EFVVSPPS-LHSEFMCPVCVDTLKNTMTAKERLRCFCAECTITALGSGNKECLGVPGWCK 95
Query: 136 -PACRTHCASRRSLRDDLNYDALIAALYPDIDKYE---EEELAF 175
P C S RSLR D N+DALI+ +YP +YE E ELA
Sbjct: 96 YPTCWKMLVSERSLRPDPNFDALISKIYPSCGEYEVHQERELAM 139
>gi|146162240|ref|XP_001009052.2| hypothetical protein TTHERM_00263030 [Tetrahymena thermophila]
gi|146146486|gb|EAR88807.2| hypothetical protein TTHERM_00263030 [Tetrahymena thermophila
SB210]
Length = 447
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMRLGN-NECPACRTHCASRRSLRDDLNYDAL 157
CPICL I ++ V C HRFC+ECI+KA+R +CP CR ++R LR D N +
Sbjct: 50 CPICLDIFQEPVYVKGCSHRFCKECIEKAIRSSKMKQCPTCRRIIGTKRLLRVDFNVQEI 109
Query: 158 IAALYPDIDKYEE 170
I +Y DI K+ E
Sbjct: 110 INLIYGDISKFLE 122
>gi|403347191|gb|EJY73013.1| Zinc finger (C3HC4 RING finger) protein, putative [Oxytricha
trifallax]
Length = 378
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 5/134 (3%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDL 152
I+ +QCP+C I + V CLH+FC CID R ECP CR SRR LR+D
Sbjct: 101 IKDTLQCPVCFDIYQSPVIVKPCLHKFCNNCIDAYNRKIKKECPGCRHQIGSRRMLRNDY 160
Query: 153 NYDALIAALYPDIDKYEEEELAFQDEEAARNKQ----IQASIAQTFQRQTEALGRKRTPK 208
+I+ L +ID++ + E + EE R + + + + Q + + ++R K
Sbjct: 161 KISNIISTLISNIDEFNKLE-QIKREETVRTSYDFDGQKQKMMKILESQEQIIKQERLEK 219
Query: 209 STSALRRSHGRYRD 222
+ +R +++
Sbjct: 220 NMPKPKRKREEFKE 233
>gi|403374159|gb|EJY87017.1| hypothetical protein OXYTRI_07538 [Oxytricha trifallax]
Length = 531
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 61 AAAADVDGNESDRSRSSGDGEKDEFVI-VKLSDIRKEVQCPICLGIIRKTRTVMECLHRF 119
A D++ +E + S +DE ++ L DI +CPICL I V EC H+F
Sbjct: 11 TAETDIEMSEMELEDS-----QDEIILGTVLEDILDLFRCPICLDIFEMPVKVKECGHQF 65
Query: 120 CRECIDKAMRLGN-NECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYE 169
CREC +K RL C CR +RR LR D+ +LI PD+ Y+
Sbjct: 66 CRECAEKYGRLFKPAHCALCRNQIMTRRDLRIDMQLISLINKFIPDVRAYK 116
>gi|403368698|gb|EJY84188.1| hypothetical protein OXYTRI_18072 [Oxytricha trifallax]
Length = 528
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 61 AAAADVDGNESDRSRSSGDGEKDEFVI-VKLSDIRKEVQCPICLGIIRKTRTVMECLHRF 119
A D++ +E + S +DE ++ L DI +CPICL I V EC H+F
Sbjct: 11 TAETDIEMSEMELEDS-----QDEIILGSVLEDILDLFRCPICLDIFEMPVKVKECGHQF 65
Query: 120 CRECIDKAMRLGN-NECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYE 169
CREC +K RL C CR +RR LR D+ +LI PD+ Y+
Sbjct: 66 CRECAEKYGRLFKPAHCALCRNQIMTRRDLRIDMQLISLINKFIPDVRAYK 116
>gi|297612063|ref|NP_001068133.2| Os11g0574200 [Oryza sativa Japonica Group]
gi|255680205|dbj|BAF28496.2| Os11g0574200 [Oryza sativa Japonica Group]
Length = 775
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 84/143 (58%), Gaps = 9/143 (6%)
Query: 132 NNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIA 191
N+ECPACRT AS SL+ D N+DALI LYPD+ K EEEELAF +E+ R K+IQAS
Sbjct: 14 NDECPACRT-LASSHSLKVDPNFDALILTLYPDLHKDEEEELAFTEEKTCR-KKIQASTD 71
Query: 192 QTFQRQTEALGRKRTPKSTSALRRSHGRY--RDTPLRGRRNYRMTELQGSD--ENDDANG 247
+ R+ EALG+KR+ RS G R G + +++ G D END++
Sbjct: 72 EAPHRRKEALGKKRSAAKAIGSSRSQGNMLARKRGHIGFPDIVPSKVGGKDREENDNSGC 131
Query: 248 DAGKDSSSADERSTEVRPKRRKR 270
D + S DE S +++ KR +R
Sbjct: 132 D---EWSLFDEYSQDIKKKRARR 151
>gi|403340560|gb|EJY69568.1| Zinc finger (C3HC4 RING finger) protein, putative [Oxytricha
trifallax]
Length = 555
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDA 156
QCP+C I + CLH FC+ CI+ +R ECP C+ + ++R LR + ++
Sbjct: 80 FQCPLCKEIAADPGVIKHCLHFFCKNCIETCIRQYKKECPMCKKNMGTKRELRRNRAFEN 139
Query: 157 LIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRS 216
+I L DI+ Y QD ++A K+IQ RQ + R R + A R+
Sbjct: 140 IIKVLSKDIEIY-------QDNQSALFKEIQMKQLNEM-RQLSQISRDRKLIDSQAGSRN 191
Query: 217 HGRYR 221
+ R
Sbjct: 192 GSKKR 196
>gi|393908615|gb|EJD75133.1| hypothetical protein LOAG_17668 [Loa loa]
Length = 536
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
V I KE++C IC I+ T V C+HRFC +CI + + G +CP+C +
Sbjct: 41 VHFDWISKELECGICEKTIQNTMVVRNCMHRFCADCILQRIHTGARKCPSCHKVLPKKTP 100
Query: 148 LRDDLNYDALIAALYPDIDK-------YEEEELAFQDEEAARNKQIQASIAQTFQRQTEA 200
L+ D N+DA+I +++ E L F + K +A++ +
Sbjct: 101 LKSDANFDAIINKFTLSVERRCVKRPITESSNLCFTKKRVFDKKSPIKRLAKSDPVVPSS 160
Query: 201 LGRKRTPKSTSA 212
+ +PK+T A
Sbjct: 161 SSERASPKNTKA 172
>gi|125537292|gb|EAY83780.1| hypothetical protein OsI_38996 [Oryza sativa Indica Group]
gi|125579972|gb|EAZ21118.1| hypothetical protein OsJ_36761 [Oryza sativa Japonica Group]
Length = 470
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE----CPACR 139
E V+VK + + + CP+C I+R TV ECLH FCR+CI K + N+E CP C+
Sbjct: 59 EVVMVKRELLARCMTCPLCRRILRDATTVSECLHTFCRKCIYKKI---NDEELEHCPVCK 115
Query: 140 TH--CASRRSLRDDLNYDALIAALYPDIDK---YEEEELAFQDEEAARNKQIQASIAQTF 194
CA LR D N + + ++P K EE E + + I + + T
Sbjct: 116 IDLGCAPLEKLRADHNIQDVRSKIFPLKRKKVNAEEVESPIAPPAKRKERSISSLVVNTP 175
Query: 195 QRQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 254
+ ++L +RT ST R+S RD + + + D N + D+S
Sbjct: 176 EITPKSLTGRRTRAST---RKSAAALRD----------LGPIIPPVKKDSDNTNKNADNS 222
Query: 255 SADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHR 299
S + ++V RR+ A S S+ D + SE+ R
Sbjct: 223 SLLDSLSKVPQTRRQVLSNAETSSHPSSKDKGGDDKDLDKSELWR 267
>gi|390352349|ref|XP_783799.2| PREDICTED: polycomb group RING finger protein 2-like
[Strongylocentrotus purpuratus]
Length = 479
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++D+ K + C +C G I +++ECLH FCR CI + + + +CP C T R
Sbjct: 7 LKITDLNKHLTCSLCKGYIVDATSIIECLHSFCRSCIVRYLHT-SKQCPVCDTQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQ 197
L R D L+ L P + K E+ + E + Q S+AQT R+
Sbjct: 66 LLNIRSDKTLQNLVYKLVPSMFK---GEMKRRREFYKSHPQASTSLAQTVSRE 115
>gi|395512454|ref|XP_003760454.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
RING1-like [Sarcophilus harrisii]
Length = 438
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 23/166 (13%)
Query: 59 TPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHR 118
TP A +DG E D S S ++ E+ PI L +++ T ECLH
Sbjct: 24 TPXEAI-MDGTEIDVSPPS---------------LQLELMFPIYLDMLKNTXDTKECLHH 67
Query: 119 FCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDE 178
F CI + GN ECP R + SL + N+DALI+ +YP +E+
Sbjct: 68 FSXNCIVTVLXSGNKECPTSRQKLVLKWSLXAEPNFDALISQIYPS-----QEDCVIIGL 122
Query: 179 EAARNKQIQASIAQ--TFQRQTEALGRKRTPKSTSALRRSHGRYRD 222
N+Q +SI + + + + R P S L GR D
Sbjct: 123 SRLHNQQALSSIVEEGIWMQAMHRVHXVRRPMPESDLTAKSGREGD 168
>gi|357161750|ref|XP_003579192.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Brachypodium
distachyon]
Length = 479
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGN-NECPACRTH-- 141
V VK ++ + CP+C +R+ T+ ECLH FCR+CI K + + N CP C+
Sbjct: 75 VVKVKKENLAPRITCPLCQRYLREATTICECLHTFCRKCIYKKLAVEELNHCPVCKIDLG 134
Query: 142 CASRRSLRDDLNYDALIAALYPDIDKY--EEEELAFQDEEAARNKQIQASIAQTFQRQTE 199
CA LR D N AL + L P K E E + + I + + + T
Sbjct: 135 CAPAEKLRADHNLQALRSKLIPVKGKKINAEVESPVTAPVKIKERSISSLVVDPPRLTTS 194
Query: 200 ALGRKR---TPKSTSALR 214
GR+ T K+ +ALR
Sbjct: 195 LTGRRTRAVTRKAAAALR 212
>gi|402593332|gb|EJW87259.1| hypothetical protein WUBG_01829 [Wuchereria bancrofti]
Length = 544
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDL 152
I KE++C IC I+ T V C+HRFC +CI + + G +CP+C + L+ D
Sbjct: 46 ISKELECGICEKTIQNTMVVRNCMHRFCADCILQRIHTGARKCPSCHKVLPKKTPLKSDA 105
Query: 153 NYDALIAALY 162
N+DA+I ++
Sbjct: 106 NFDAIINKMW 115
>gi|328721666|ref|XP_001943283.2| PREDICTED: hypothetical protein LOC100162794 [Acyrthosiphon pisum]
Length = 1082
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRL-GNNECPACRTHCASRR 146
VKL+D+ +++ C +CLG + +++ECLH FCR CI + L NN CP CR + +
Sbjct: 29 VKLTDVNRQLICVLCLGYLVDATSIVECLHSFCRSCI--VLHLDKNNFCPICREDIQNSK 86
Query: 147 SLRDDLNYDALIAALYPDI 165
L+ D ++ L P +
Sbjct: 87 VLKPDKALQDIVYKLVPGL 105
>gi|167533065|ref|XP_001748213.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773333|gb|EDQ86974.1| predicted protein [Monosiga brevicollis MX1]
Length = 381
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC---AS 144
VK+ D+ + + C IC+G I T+ ECLH FCR CI K R + CP C A
Sbjct: 158 VKMVDVNQYIVCQICMGYIVNATTISECLHSFCRSCIVKHFR-KSKICPVCNQQAHETAP 216
Query: 145 RRSLRDDLNYDALIAALYPDI 165
+LR D ++I L PD+
Sbjct: 217 LDTLRQDRTLQSIINKLLPDV 237
>gi|327275572|ref|XP_003222547.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Anolis carolinensis]
Length = 1360
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 6/109 (5%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMR--LGNNECPACRTHCASRRSLRD 150
++K ++CPICL ++++ + C H FCR C K +R G +CP C ++RSLR+
Sbjct: 18 LQKNLECPICLDVMKEPVST-NCAHIFCRFCTLKLLRQKTGVTQCPLCNAK-VTKRSLRE 75
Query: 151 DLNYDALIAALYPDIDKYEEEE-LAFQDEEAARNKQIQA-SIAQTFQRQ 197
D+ + +I + I +E + L F D++ K +A S+A +++ Q
Sbjct: 76 DVRFKQVIKVVLDVIRAFERDTGLKFSDDQCFPKKDTEATSVADSWKEQ 124
>gi|312099279|ref|XP_003149304.1| hypothetical protein LOAG_13753 [Loa loa]
Length = 175
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
V I KE++C IC I+ T V C+HRFC +CI + + G +CP+C +
Sbjct: 41 VHFDWISKELECGICEKTIQNTMVVRNCMHRFCADCILQRIHTGARKCPSCHKVLPKKTP 100
Query: 148 LRDDLNYDALIAALYPDIDK-------YEEEELAFQDEEAARNKQIQASIAQTFQRQTEA 200
L+ D N+DA+I +++ E L F + K +A++ +
Sbjct: 101 LKSDANFDAIINKFTLSVERRCVKRPITESSNLCFTKKRVFDKKSPIKRLAKSDPVVPSS 160
Query: 201 LGRKRTPKSTSA 212
+ +PK+T A
Sbjct: 161 SSERASPKNTKA 172
>gi|383857689|ref|XP_003704336.1| PREDICTED: uncharacterized protein LOC100877547 [Megachile
rotundata]
Length = 834
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 74 SRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN 133
S S D E E + D+ + + CP+C G + T+MECLH FCR CI + + G
Sbjct: 10 SERSSDMEAKEREKPLVKDLNEHIVCPLCRGYLIDATTLMECLHSFCRGCIVRRLSSGAR 69
Query: 134 ECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEE 171
CP C + A+ L D+ L+ + P + + E E
Sbjct: 70 ACPVC--NVATSPPLLPDVKLQRLVYLVVPGLFRSELE 105
>gi|403370330|gb|EJY85028.1| Zinc finger, C3HC4 type domain-containing protein [Oxytricha
trifallax]
Length = 193
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE--CPACRTHCASR 145
+K D+ ++CP+C G R T+ ECL FC+ CI K N+ CP C H R
Sbjct: 16 IKKRDLHSYLKCPLCTGFFRDAHTINECLDTFCKSCIYKYFYEDQNKENCPKCNIHLGGR 75
Query: 146 --RSLRDDLNYDALIAALYPDIDKYEEEEL 173
++ D ++ LYP K +E+ +
Sbjct: 76 PLETIISDQTIQKIVDLLYPQFKKKDEQAI 105
>gi|341874458|gb|EGT30393.1| hypothetical protein CAEBREN_21765 [Caenorhabditis brenneri]
Length = 2806
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLR 149
+ ++ + C +C +I+ + +C HRFC +CI + N CPACR + AS+R L+
Sbjct: 200 MKEVIGSLSCDVCQEVIQMSVVTKKCGHRFCDQCILITLLRAGNTCPACRQNLASKRELQ 259
Query: 150 DDLNYDALI 158
D +D LI
Sbjct: 260 QDPRFDQLI 268
>gi|328777331|ref|XP_003249319.1| PREDICTED: hypothetical protein LOC100576671 [Apis mellifera]
Length = 867
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 74 SRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN 133
S S D E E + D+ + + CP+C G + T++ECLH FCR CI + + G
Sbjct: 5 SEPSSDMEAKEREKPLVKDLNEHIVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSSGAR 64
Query: 134 ECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEE 171
CP C + A+ L D+ L+ + P + + E E
Sbjct: 65 ACPVC--NVATSPPLLPDVKLQRLVYLMVPGLFRSELE 100
>gi|340723698|ref|XP_003400226.1| PREDICTED: hypothetical protein LOC100648837 [Bombus terrestris]
Length = 843
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 74 SRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN 133
S S+ D E E + D+ + + CP+C G + T++ECLH FCR CI + + G
Sbjct: 5 SESTNDMEAKEREKPLVKDLNEHIVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSSGAR 64
Query: 134 ECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEE 171
CP C + A+ L D+ L+ + P + + E E
Sbjct: 65 ACPVC--NVATSPPLLPDVKLQRLVYLVVPGLFRSELE 100
>gi|350426395|ref|XP_003494425.1| PREDICTED: hypothetical protein LOC100748744 [Bombus impatiens]
Length = 849
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 74 SRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN 133
S S+ D E E + D+ + + CP+C G + T++ECLH FCR CI + + G
Sbjct: 8 SESTNDMEAKEREKPLVKDLNEHIVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSSGAR 67
Query: 134 ECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEE 171
CP C + A+ L D+ L+ + P + + E E
Sbjct: 68 ACPVC--NVATSPPLLPDVKLQRLVYLVVPGLFRSELE 103
>gi|194376320|dbj|BAG62919.1| unnamed protein product [Homo sapiens]
Length = 386
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 20/84 (23%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+ V + E+ CPICL +++ T T ECP CR S+
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMT--------------------TKECPTCRKKLVSK 74
Query: 146 RSLRDDLNYDALIAALYPDIDKYE 169
RSLR D N+DALI+ +YP ++YE
Sbjct: 75 RSLRPDPNFDALISKIYPSREEYE 98
>gi|449491308|ref|XP_002195279.2| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Taeniopygia guttata]
Length = 1803
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM---RLGNNECPACRTHCASRR 146
LS ++K ++CPICL ++++ + +C H FCR C+ K + + G ECP C+T ++R
Sbjct: 15 LSAMQKNLECPICLDVVQEPVST-KCDHTFCRFCMFKLINKKKKGVVECPLCKTE-VTKR 72
Query: 147 SLRDDLNYDALIAALYPDIDKYE 169
SL+++ + LI L I +E
Sbjct: 73 SLKENSRFKQLIEGLLEAIHAFE 95
>gi|325192720|emb|CCA27133.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 239
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 8/129 (6%)
Query: 63 AADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRE 122
A G S DG K F + DI + C +C G R +T+ ECLH FC
Sbjct: 2 AKKAPGPTSSLETIIMDGRKVSF---RYKDINRHFICTLCNGYFRDAQTIKECLHTFCNG 58
Query: 123 CIDKAMRLGN--NECPACRTHCASR--RSLRDDLNYDALIAALYPDIDKYE-EEELAFQD 177
CI ++CP C H + L D + LI+ ++PD + E +EEL F
Sbjct: 59 CIRSYFWRNRDAHKCPTCSVHLGVKPWTQLISDPSIQGLISKIFPDPTQQEKKEELKFYK 118
Query: 178 EEAARNKQI 186
+ + K+I
Sbjct: 119 HLSIKRKEI 127
>gi|391337288|ref|XP_003743002.1| PREDICTED: uncharacterized protein LOC100900541 [Metaseiulus
occidentalis]
Length = 1015
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRTHCASR 145
KL D+ + CP+C G T++ECLH FCR CI K L N+ CP C+ A
Sbjct: 5 KLVDVNDHLTCPLCHGYFVDATTIVECLHSFCRTCIIK--HLSKNQFPFCPVCKFQLAGT 62
Query: 146 R---SLRDDLNYDALIAALYPDIDKYE 169
+ LR D ++ L P + + E
Sbjct: 63 KLHQYLRSDSTLQDIVYKLVPSLFRNE 89
>gi|308512539|ref|XP_003118452.1| CRE-SPAT-3 protein [Caenorhabditis remanei]
gi|308239098|gb|EFO83050.1| CRE-SPAT-3 protein [Caenorhabditis remanei]
Length = 2826
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 88 VKLSDIRKEV---QCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCAS 144
V +DI+K + C +C +I+++ +C HRFC +CI A N CP CR + S
Sbjct: 152 VSETDIQKVIGSFSCHVCQEVIQQSIVTKKCGHRFCDQCIIVAFIRSGNTCPTCRQNLGS 211
Query: 145 RRSLRDDLNYDALI 158
+R L+ D +D I
Sbjct: 212 KRELQQDPRFDQFI 225
>gi|348679361|gb|EGZ19177.1| hypothetical protein PHYSODRAFT_490527 [Phytophthora sojae]
Length = 253
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRL-GNNECPACRTHCAS 144
V VKL+++ + + C +C GI+R T+ +CLH FC+ CI + + G+ CP C +
Sbjct: 8 VTVKLAELTEHLGCALCHGILRDAHTIPDCLHSFCKSCIYRHFLVKGSCVCPKCNKTLSP 67
Query: 145 R--RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARN 183
R +L D ++ ++P+ ++E+E+ + E A+N
Sbjct: 68 RPITTLITDQKLQEVVDRIFPE---FKEQEVILEKEFYAKN 105
>gi|380012177|ref|XP_003690163.1| PREDICTED: uncharacterized protein LOC100863675 [Apis florea]
Length = 846
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLR 149
+ D+ + + CP+C G + T++ECLH FCR CI + + G CP C + A+ L
Sbjct: 11 VKDLNEHIVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSSGARACPVC--NVATSPPLL 68
Query: 150 DDLNYDALIAALYPDIDKYEEE 171
D+ L+ + P + + E E
Sbjct: 69 PDVKLQRLVYLMVPGLFRSELE 90
>gi|45383782|ref|NP_989500.1| breast cancer 1, early onset [Gallus gallus]
gi|15081211|gb|AAK83825.1|AF355273_1 breast and ovarian cancer susceptibility-like protein [Gallus
gallus]
Length = 1749
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM---RLGNNECPACRTHCASRR 146
LS ++K ++CP+CL +I++ + +C H FCR C+ K + + G +CP C+T ++R
Sbjct: 15 LSAMQKNLECPVCLDVIKEPVST-KCDHVFCRFCMFKLLSRKKKGVIQCPLCKTE-VTKR 72
Query: 147 SLRDDLNYDALIAALYPDIDKYE 169
SL+++ + LI L I +E
Sbjct: 73 SLKENSRFKQLIEGLLEAISAFE 95
>gi|332811389|ref|XP_003308686.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Pan
troglodytes]
gi|397489265|ref|XP_003815651.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Pan
paniscus]
gi|402857837|ref|XP_003893445.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Papio
anubis]
gi|426333042|ref|XP_004028096.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Gorilla
gorilla gorilla]
gi|441624474|ref|XP_004088993.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Nomascus
leucogenys]
gi|119611593|gb|EAW91187.1| ring finger protein 2, isoform CRA_a [Homo sapiens]
gi|193787177|dbj|BAG52383.1| unnamed protein product [Homo sapiens]
Length = 264
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLG 131
++V + E+ CPICL +++ T T ECLHRFC +CI A+R G
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSG 83
>gi|403266317|ref|XP_003925336.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 264
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLG 131
++V + E+ CPICL +++ T T ECLHRFC +CI A+R G
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSG 83
>gi|301097065|ref|XP_002897628.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106846|gb|EEY64898.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 249
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRL-GNNECPACRTHCASR- 145
VKL+++ + + C +C GI+R T+ +CLH FC+ CI + + G+ CP C + R
Sbjct: 10 VKLAELTEHLGCVLCHGILRDAHTIPDCLHSFCKSCIYRHFLVKGSCICPKCNKVLSPRP 69
Query: 146 -RSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARN 183
+L D A++ ++P+ ++E EL + E N
Sbjct: 70 IATLITDQKLQAVVDRIFPE---FKEHELVLEKEFYTTN 105
>gi|449455272|ref|XP_004145377.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
gi|449474218|ref|XP_004154108.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
Length = 430
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECI-DKAMRLGNNECPACRTH 141
+ V VK I + CP+C ++++ T+ ECLH FCR+CI DK CP C
Sbjct: 3 NRVVKVKREAIAACITCPLCNKLLKEATTISECLHTFCRKCISDKISDEEIENCPVCNID 62
Query: 142 --CASRRSLRDDLNYDALIAALYP 163
CA LR D N + L A ++P
Sbjct: 63 LGCAPLEKLRPDHNLEDLRAKIFP 86
>gi|449530319|ref|XP_004172143.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
Length = 430
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECI-DKAMRLGNNECPACRTH 141
+ V VK I + CP+C ++++ T+ ECLH FCR+CI DK CP C
Sbjct: 3 NRVVKVKREAIAACITCPLCNKLLKEATTISECLHTFCRKCISDKISDEEIENCPVCNID 62
Query: 142 --CASRRSLRDDLNYDALIAALYP 163
CA LR D N + L A ++P
Sbjct: 63 LGCAPLEKLRPDHNLEDLRAKIFP 86
>gi|410917430|ref|XP_003972189.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
2-like [Takifugu rubripes]
Length = 362
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC---AS 144
+K++D+ + CP+C G + T++ECLH FC+ CI A N CP C
Sbjct: 30 IKITDLNPNLTCPLCAGYLIDATTIVECLHSFCKTCI-VAFLETNKFCPRCDVQVHKTCP 88
Query: 145 RRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQ-ASIAQTF 194
+ S+R D ++ L P + K +E+ + + A N++++ + +TF
Sbjct: 89 QLSIRADKTLQDIVYKLVPGLFK---DEMKRRRDFYAENRELEPGEVVETF 136
>gi|395825224|ref|XP_003785839.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Otolemur garnettii]
Length = 246
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLG 131
++V + E+ CPICL +++ T T ECLHRFC +CI A+R G
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSG 83
>gi|293331779|ref|NP_001168287.1| uncharacterized LOC100382051 [Zea mays]
gi|223947229|gb|ACN27698.1| unknown [Zea mays]
gi|414877923|tpg|DAA55054.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 486
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE----CPACRT 140
+VK + + + CP+C ++R+ T+ ECLH FCR+CI K + N+E CP C+
Sbjct: 70 VAMVKRELLTRCLTCPLCDHLLRQATTISECLHTFCRKCIYKKL---NDEDLDHCPVCKI 126
Query: 141 H--CASRRSLRDDLNYDALIAALYPDIDK---YEEEELAFQDEEAARNKQIQASIAQTFQ 195
C LR D N + + +P K EE E + + I + + T +
Sbjct: 127 DLGCTPVEKLRADHNIQDVRSKFFPFKRKKVNAEEAESPIMLPVKVKERSISSLVVNTPR 186
Query: 196 RQTEALGRKRT 206
AL +RT
Sbjct: 187 VTPAALTGRRT 197
>gi|7507801|pir||T16870 hypothetical protein T13H2.3 - Caenorhabditis elegans
Length = 2447
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALI 158
C +C +I+ + +C HRFC +CI A N CP CR + S+R L+ D +D LI
Sbjct: 162 CDVCQELIQGSIMTKKCGHRFCDQCILVAFMRSGNTCPTCRQNLGSKRELQQDPRFDQLI 221
>gi|297281250|ref|XP_001108188.2| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Macaca mulatta]
Length = 206
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLG 131
++V + E+ CPICL +++ T T ECLHRFC +CI A+R G
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSG 83
>gi|392925881|ref|NP_001024904.2| Protein SPAT-3, isoform a [Caenorhabditis elegans]
gi|351049594|emb|CCD63270.1| Protein SPAT-3, isoform a [Caenorhabditis elegans]
Length = 2476
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALI 158
C +C +I+ + +C HRFC +CI A N CP CR + S+R L+ D +D LI
Sbjct: 162 CDVCQELIQGSIMTKKCGHRFCDQCILVAFMRSGNTCPTCRQNLGSKRELQQDPRFDQLI 221
>gi|326520948|dbj|BAJ92837.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE----CPACRT 140
V+VK + + + C +C ++R+ T+ ECLH FCR+CI K + N+E CP C+
Sbjct: 73 VVMVKREQLARCMTCKLCHRLLREATTISECLHTFCRKCIYKKL---NDEELDHCPVCKI 129
Query: 141 H--CASRRSLRDDLNYDALIAALYP-DIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQ 197
CA LR D N + + ++P +K + +E + + I + + T +
Sbjct: 130 DLGCAPVEKLRADHNKQDVRSKIFPLKRNKIDAKESPVSLPIKRKERSISSLVVDTPRIT 189
Query: 198 TEALGRKR---TPKSTSALR 214
T GR+ T K+ +ALR
Sbjct: 190 TGLTGRRTRAVTRKAAAALR 209
>gi|326508722|dbj|BAJ95883.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE----CPACRT 140
V+VK + + + C +C ++R+ T+ ECLH FCR+CI K + N+E CP C+
Sbjct: 73 VVMVKREQLARCMTCKLCHRLLREATTISECLHTFCRKCIYKKL---NDEELDHCPVCKI 129
Query: 141 H--CASRRSLRDDLNYDALIAALYP-DIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQ 197
CA LR D N + + ++P +K + +E + + I + + T +
Sbjct: 130 DLGCAPVEKLRADHNKQDVRSKIFPLKRNKIDAKESPVSLPIKRKERSISSLVVDTPRIT 189
Query: 198 TEALGRKR---TPKSTSALR 214
T GR+ T K+ +ALR
Sbjct: 190 TGLTGRRTRAVTRKAAAALR 209
>gi|224009894|ref|XP_002293905.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970577|gb|EED88914.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 355
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCA- 143
FV +S++R + C +C G R TV +CLH FCR C+ +G + CP C
Sbjct: 98 FVDFPVSNLRDHLICSLCKGYFRDPYTVADCLHSFCRSCLIAQFTVGRHRCPTCDISLEP 157
Query: 144 -SRRSLRDDLNYDALIAALYPDIDKYEEEE 172
R + D ++ ++P + EE++
Sbjct: 158 DPFREVLADRTLQEVVEKVFPWMQTKEEQD 187
>gi|432922349|ref|XP_004080308.1| PREDICTED: uncharacterized protein LOC101160694 [Oryzias latipes]
Length = 1283
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM---RLGNNECPACRTHCASRR 146
++D+ + +QCPICL ++ +C H+FC+ C+ K + + CP C++ +RR
Sbjct: 13 IADLWETLQCPICLDLM-AVPVSTKCDHKFCKFCMTKLLDSSKQNGASCPVCKSKI-TRR 70
Query: 147 SLRDDLNYDALIAALYPDIDKYE 169
SLR+ ++ L+ L I YE
Sbjct: 71 SLRESPSFQKLVTGLQDIIQAYE 93
>gi|332019598|gb|EGI60076.1| Polycomb group RING finger protein 2 [Acromyrmex echinatior]
Length = 847
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLR 149
+ D+ + + CP+C G + T++ECLH FCR CI + + G CP C A+ L
Sbjct: 11 VKDLNEHIVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSSGARACPVC--SVATSPPLL 68
Query: 150 DDLNYDALIAALYPDIDKYEEE 171
D+ L+ P + + E E
Sbjct: 69 PDMRLQRLVYLAVPGLFRSELE 90
>gi|62638180|gb|AAX92675.1| BRCA1-like protein [Monodelphis domestica]
Length = 1844
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L ++K ++CPICL +I++ + C H FCR C+ K + + G ++CP C+ + ++RS
Sbjct: 19 LIGMQKILECPICLELIKEPVSTT-CDHIFCRFCMLKLLSKKKGPSQCPLCKNNI-TKRS 76
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
LR+ ++ L+ L I +E
Sbjct: 77 LRESTRFNQLVEGLLKTIRAFE 98
>gi|77020291|ref|NP_001029141.1| breast cancer type 1 susceptibility protein [Monodelphis domestica]
Length = 1840
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L ++K ++CPICL +I++ + C H FCR C+ K + + G ++CP C+ + ++RS
Sbjct: 15 LIGMQKILECPICLELIKEPVSTT-CDHIFCRFCMLKLLSKKKGPSQCPLCKNNI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
LR+ ++ L+ L I +E
Sbjct: 73 LRESTRFNQLVEGLLKTIRAFE 94
>gi|432091208|gb|ELK24417.1| Polycomb group RING finger protein 3 [Myotis davidii]
Length = 298
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 79 DGEKDEFVI--VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECP 136
D EK + + +KL DI + C +C G + TV ECLH FCR C+ K + NN CP
Sbjct: 51 DAEKPKMLTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCP 109
Query: 137 ACR 139
CR
Sbjct: 110 TCR 112
>gi|345567439|gb|EGX50371.1| hypothetical protein AOL_s00076g135 [Arthrobotrys oligospora ATCC
24927]
Length = 577
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 39 DTLQRDHSNNLEEQQPPQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQ 98
+ L+R S N+E A A +++ ++ + E + VKL +E+
Sbjct: 52 NPLKRQLSENME----------ALIAQAKASKTTAGSTAAQAAQSETIYVKL---ERELT 98
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALI 158
C IC + + T++ CLH FC CI R N+ CP+CR A + RD LI
Sbjct: 99 CSICCELFKDPITLLNCLHNFCGSCIVPWGR-NNSSCPSCR---AEIKGCRDAFALKPLI 154
Query: 159 AALYPDIDKYEEEELAFQDEE 179
D+ E+ EL+F E+
Sbjct: 155 -----DMLVKEKPELSFSKED 170
>gi|197111886|gb|ACH43057.1| BMI1-like protein [Schistosoma japonicum]
Length = 354
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 14/94 (14%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRT------- 140
V ++ + C +C G + T++ECLH FCR CI ++L N CP C T
Sbjct: 7 VPVTFFNPYLTCNLCRGYLIDATTIVECLHSFCRSCILTYLKL-NTTCPVCETLLHKTKP 65
Query: 141 HCASRRSLRDDLNYDALIAALYPDIDKYEEEELA 174
HCA +R D A++ L P++ +E+E L
Sbjct: 66 HCA----IRPDRALQAIVYKLIPNL--FEKEMLC 93
>gi|226479778|emb|CAX73185.1| Polycomb complex protein BMI-1 [Schistosoma japonicum]
Length = 354
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 14/94 (14%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRT------- 140
V ++ + C +C G + T++ECLH FCR CI ++L N CP C T
Sbjct: 7 VPVTFFNPYLTCNLCRGYLIDATTIVECLHSFCRSCILTYLKL-NTTCPVCETLLHKTKP 65
Query: 141 HCASRRSLRDDLNYDALIAALYPDIDKYEEEELA 174
HCA +R D A++ L P++ +E+E L
Sbjct: 66 HCA----IRPDRALQAIVYKLIPNL--FEKEMLC 93
>gi|357115329|ref|XP_003559442.1| PREDICTED: E3 ubiquitin protein ligase DRIP1-like [Brachypodium
distachyon]
Length = 449
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRTH--CASRRSLRDD 151
+ CP+C G++R EC+H FCRECI K ++ + E CP C + A LR D
Sbjct: 19 LTCPLCRGLLRDAHAFTECVHTFCRECIMK--KIDDEEIESCPVCNIYLGIAPEEKLRPD 76
Query: 152 LNYDALIAALYP 163
N AL L+P
Sbjct: 77 NNIQALRKRLFP 88
>gi|170059595|ref|XP_001865431.1| posterior sex combs protein [Culex quinquefasciatus]
gi|167878320|gb|EDS41703.1| posterior sex combs protein [Culex quinquefasciatus]
Length = 1324
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC-ASRR 146
+ LS + + C +C G + T++ECLH FC CI K +R CP C ++
Sbjct: 40 IHLSSVNPYITCNLCKGYLIDATTIVECLHSFCHSCIMKHLR-TEQYCPQCEMMINKAKP 98
Query: 147 SLRDDLNYDALIAALYPDIDKYEEEEL---AFQDEEAARNKQIQASIAQTFQR 196
+++ D A++ L P + YE+E L AF R QA++A QR
Sbjct: 99 NIKPDATLQAIVYKLVPGL--YEKELLRKRAFY-----RQHPDQAALATPEQR 144
>gi|260817655|ref|XP_002603701.1| hypothetical protein BRAFLDRAFT_126892 [Branchiostoma floridae]
gi|229289023|gb|EEN59712.1| hypothetical protein BRAFLDRAFT_126892 [Branchiostoma floridae]
Length = 628
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 67 DGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDK 126
DG S +FV+VK+ DI + C +C G TV ECLH FC+ CI K
Sbjct: 392 DGKRDHFCDSCSFASPYKFVMVKICDINPHIVCILCAGYFIDATTVTECLHTFCKSCIVK 451
Query: 127 AMRLGNNECPAC 138
++ + CP C
Sbjct: 452 YLQ-TSKFCPMC 462
>gi|414872711|tpg|DAA51268.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 458
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 26/230 (11%)
Query: 90 LSDIRKE-----VQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE----CPACRT 140
L+ +R+E + CP+C G++R+ + CLH FCRECI + + N+E CP C
Sbjct: 7 LARVRREALAACMTCPLCRGLLREATAITVCLHTFCRECILEKI---NDEEIDCCPVCNI 63
Query: 141 H--CASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIA---QTFQ 195
C LR D N + ++P + A A R ++ +S+ +
Sbjct: 64 DLGCDPEEKLRPDHNLQDIRNKVFPIKKINVDSPKALTTLPAKRKQRSISSLVVDTPSVV 123
Query: 196 RQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSSS 255
+QT G++ T A RR+ +P+ N +L EN D D S S
Sbjct: 124 KQTGLTGKR-----TKAKRRAAASLATSPV----NNGTMKLPSKSENGDQKTDKSCPSQS 174
Query: 256 ADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHRESMGAS 305
++ + + + + + S S A T + +++ S +S
Sbjct: 175 TKAATSANKTENQDQKKTKKISAKQSTRAATPAKKKQRNTDAQVSSKPSS 224
>gi|268579167|ref|XP_002644566.1| C. briggsae CBR-SPAT-3 protein [Caenorhabditis briggsae]
Length = 2691
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALI 158
C +C +I+ + +C HRFC +CI ++ N CP CR + S+R L+ D +D LI
Sbjct: 284 CDVCQEVIQHSIVNKKCGHRFCDQCILVSIMRSGNTCPTCRQNLGSKRELQQDPRFDQLI 343
>gi|47223969|emb|CAG06146.1| unnamed protein product [Tetraodon nigroviridis]
Length = 347
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC---AS 144
++++D+ + CP+C G + T++ECLH FC+ CI A N CP C
Sbjct: 6 IQITDLNPNLTCPLCAGYLIDATTIVECLHSFCKTCI-VAFLETNKFCPRCDVQVHKTCP 64
Query: 145 RRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQAS-IAQTF 194
+ S+R D ++ L P + K +E+ + + A N++++ + +TF
Sbjct: 65 QLSIRADKTLQDIVYKLVPGLFK---DEMKRRRDFYAENRELEPGEVVETF 112
>gi|324518232|gb|ADY47043.1| Polycomb group RING finger protein 3 [Ascaris suum]
Length = 151
Score = 55.5 bits (132), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC---- 138
DE+ I+ L + + CPIC G + TV+ECLH FC+ C+ K +N CP C
Sbjct: 20 DEYKIL-LRTLNPHITCPICKGYFIEATTVIECLHTFCKSCLLKHFENESNCCPKCSGLI 78
Query: 139 -RTHCASRRSLRDDLNYDALIAALYPDIDKYEEE 171
++H + S D L+ L P + EEE
Sbjct: 79 HQSHPSHYVSF--DRTMQELVYKLVPGLQAREEE 110
>gi|313232453|emb|CBY24121.1| unnamed protein product [Oikopleura dioica]
Length = 266
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 81 EKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRT 140
+K+E+V V LS I + CPIC G + + ECLH FCR C+ + ++ ECP
Sbjct: 30 KKEEYVGVSLSPISNLLACPICNGYLVNATAITECLHVFCRSCLIRKLQ-QTQECPL--P 86
Query: 141 HC------ASRRSLRDDLNYDALIAALYPDIDKYE 169
HC ++ +LR D LI L P + + E
Sbjct: 87 HCREKVIVSAEGALRYDRTLQDLIHLLVPRVLQVE 121
>gi|431897351|gb|ELK06613.1| Polycomb group RING finger protein 3 [Pteropus alecto]
Length = 226
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCRIVIHQSHP 64
Query: 148 LR---DDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQ 185
L+ D ++ L P + + E + ++EAA KQ
Sbjct: 65 LQYIGHDRTMQDIVYKLVPGLQEGETKADDSSNKEAAEEKQ 105
>gi|426232409|ref|XP_004010216.1| PREDICTED: uncharacterized protein LOC101107965 [Ovis aries]
Length = 286
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCGGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCRIVIHQSHP 64
Query: 148 LR---DDLNYDALIAALYPDIDKYEEEELAFQDEEAA 181
L+ D ++ L P + + + + D AA
Sbjct: 65 LQYIGHDRTMQDIVYKLVPGLQEVKGPQSPRWDLRAA 101
>gi|356574020|ref|XP_003555151.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Glycine max]
Length = 937
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 14/193 (7%)
Query: 2 PAQKRSY---ENATTNNNNNNHIIITPSEVVEAVLDDDGDDTLQRDHSNNLEEQQPPQDS 58
P K+ Y N++ + +P + VLD D ++T ++D +E + D+
Sbjct: 621 PKHKKRYVWHSKTPPNSSRKRRALRSPQAPIPVVLDLDAEETPRKDSGRKNKEMKVCVDN 680
Query: 59 TPAAA--------ADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTR 110
A DGNES + ++S D V+ + +R E+ C ICL I +
Sbjct: 681 EGKKACVENEGSRVGGDGNES-KEKNSADASSSS-VLPCIDKLRDELSCAICLEICFEPS 738
Query: 111 TVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEE 170
T C H FCR+C+ A +CP CR ++ R + I L+P + +
Sbjct: 739 TT-PCGHSFCRKCLRSAADKCGKKCPKCRQLISNGRPCTVNTVLWNTIQLLFPQEVEARK 797
Query: 171 EELAFQDEEAARN 183
E A + A+N
Sbjct: 798 EASALNSLQQAQN 810
>gi|344285136|ref|XP_003414319.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Loxodonta africana]
Length = 761
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ H ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNHI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIRAFE 94
>gi|393009465|gb|AFN02447.1| posterior sex combs [Bombyx mori]
Length = 1096
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC-ASRRSL 148
L ++ + + CP+C G T++ECLH FCR CI K ++ + CP C +++ ++
Sbjct: 29 LGEVNEHITCPLCRGYYIDATTIVECLHSFCRSCIIKHLK-AKSYCPVCEMMINSAKPNI 87
Query: 149 RDDLNYDALIAALYPDIDKYEEE 171
+ D ++ L P + + E E
Sbjct: 88 KLDKALQDIVYKLVPGLFQKEME 110
>gi|444729340|gb|ELW69763.1| Polycomb group RING finger protein 3 [Tupaia chinensis]
Length = 345
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|344285134|ref|XP_003414318.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Loxodonta africana]
Length = 1853
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ H ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNHI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIRAFE 94
>gi|307173961|gb|EFN64691.1| Polycomb complex protein BMI-1 [Camponotus floridanus]
Length = 1468
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
V+L+ + +++ C +C G T++ECLH FCR CI K + N CP C R
Sbjct: 10 VRLAKLNEQLTCKLCGGYFIDATTIIECLHSFCRSCIVKYLE-NNKYCPICEVQVHKSRP 68
Query: 148 L---RDDLNYDALIAALYP 163
L R D ++ L P
Sbjct: 69 LLNIRPDHTLQDIVYKLVP 87
>gi|395532332|ref|XP_003768224.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Sarcophilus harrisii]
Length = 1757
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L ++K ++CPICL +I++ + C H FC+ C+ K + + G ++CP C+ + ++RS
Sbjct: 15 LIGMQKILECPICLELIKEPVSTT-CDHIFCKFCMLKLLGKKKGPSQCPLCKNN-VTKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
LR+ + L+ L I +E
Sbjct: 73 LRESTRFKQLVEGLLKTIRAFE 94
>gi|327277255|ref|XP_003223381.1| PREDICTED: polycomb group RING finger protein 3-like [Anolis
carolinensis]
Length = 242
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCRIVIHQSHP 64
Query: 148 LR---DDLNYDALIAALYPDIDKYE 169
L+ D ++ L PD+ + E
Sbjct: 65 LQYIGHDRTMQDIVYKLVPDLQEAE 89
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Query: 72 DRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLG 131
DRSR GD L + +E+ CPICL ++ + + C H FC CI K+M+ G
Sbjct: 450 DRSRKMGDSSH-------LERMGRELNCPICLSLLNSAVS-LTCNHVFCNSCIMKSMKSG 501
Query: 132 NNECPACRTHCASRRSLRDDLNYDALIA 159
+N CP C+ RR +R + D+L++
Sbjct: 502 SN-CPVCKVP-YGRREVRPVPHMDSLVS 527
>gi|156551976|ref|XP_001602601.1| PREDICTED: hypothetical protein LOC100118694 [Nasonia vitripennis]
Length = 761
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 78 GDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPA 137
G E+ + +VK D+ + CP+C G + T++ECLH FCR CI + + G CP
Sbjct: 12 GPKERADKPLVK--DLNDHIVCPLCRGYLIDATTLVECLHSFCRGCILRRLHNGPKTCPV 69
Query: 138 CRTHCASRRSLRDDLNYDALIAALYPDIDKYEEE 171
C ++ D+ L+ + P + + E+E
Sbjct: 70 C--SASALNPPIADVGLQRLVYLVVPGLFRSEQE 101
>gi|410900956|ref|XP_003963962.1| PREDICTED: polycomb group RING finger protein 6-like [Takifugu
rubripes]
Length = 255
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 73 RSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGN 132
RS S D + D+ + L+ ++C +C G + T+ ECLH FC+ CI K +
Sbjct: 13 RSTSLSDCDSDDEPKIPLNQFYPYIRCGLCCGFLIDASTITECLHTFCKSCIVKHF-FYS 71
Query: 133 NECPACRTHCASRRSL---RDDLNYDALIAALYPDIDKYEEEEL 173
N CP C + L R D ++ + P ++++E E++
Sbjct: 72 NRCPTCSIVVHETQPLYNIRPDRQLQDIVYKMVPFLEEFEREQM 115
>gi|307103510|gb|EFN51769.1| hypothetical protein CHLNCDRAFT_139722 [Chlorella variabilis]
Length = 597
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 116 LHRFCRECIDKAMRLG-NNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELA 174
+HRFC++CI+ +R N CP CR +S+R + D +D L+ ++ D++++E++ L
Sbjct: 1 MHRFCKDCIEAWLRTQIENNCPQCRVKFSSKRDCKPDPVFDLLLGTMFGDVEEFEKQML- 59
Query: 175 FQDEEAARNKQIQASIAQTFQRQTEALGRKRTP 207
D +Q +A Q + +A R+ +P
Sbjct: 60 --DPSLEVLQQAKAVGQQIALAKEQAAARRPSP 90
>gi|26329299|dbj|BAC28388.1| unnamed protein product [Mus musculus]
gi|148688162|gb|EDL20109.1| polycomb group ring finger 3, isoform CRA_a [Mus musculus]
Length = 178
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|417408991|gb|JAA51023.1| Putative polycomb group ring finger protein 3, partial [Desmodus
rotundus]
Length = 246
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 10 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 60
>gi|344279068|ref|XP_003411313.1| PREDICTED: polycomb group RING finger protein 3-like [Loxodonta
africana]
Length = 242
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|158295814|ref|XP_001237808.2| AGAP006403-PA [Anopheles gambiae str. PEST]
gi|157016217|gb|EAU76594.2| AGAP006403-PA [Anopheles gambiae str. PEST]
Length = 1705
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC-ASRR 146
VKL + + C +C G + T++ECLH FC CI K +R CP C ++
Sbjct: 88 VKLGSVHPCITCHLCKGYLIDATTIVECLHSFCHSCIMKHLRT-EQYCPQCEMMINKAKP 146
Query: 147 SLRDDLNYDALIAALYPDIDKYEEE 171
+++ D A++ L P + YE E
Sbjct: 147 NIKPDATLQAIVYKLVPRL--YENE 169
>gi|219127250|ref|XP_002183852.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404575|gb|EEC44521.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 780
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGN----NECPACRTHCAS 144
+L ++ K + CP+CL R T + C H +CR C+ +A+ G+ CP C+ A
Sbjct: 58 ELHNMGKALSCPLCLSTYRDAVT-LPCCHAYCRSCLTQALATGSARRPPTCPCCQQRTAG 116
Query: 145 RRSLRDDLNYDALIAA 160
RRSL D + L+ A
Sbjct: 117 RRSLTDAPKLNELVRA 132
>gi|53370662|gb|AAU89157.1| Zinc finger, C3HC4 type (RING finger) containing protein [Oryza
sativa Japonica Group]
Length = 537
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRTH- 141
V+VK + + + CP+C ++R TV ECLH FCR+CI + +L + E CP C+
Sbjct: 97 VMVKRELLARCMTCPLCGRLLRDATTVSECLHTFCRKCIYE--KLNDEEVESCPVCKIDL 154
Query: 142 -CASRRSLRDDLNYDALIAALYP 163
C LR D N + + ++P
Sbjct: 155 GCTPVEKLRADHNLQDVRSKIFP 177
>gi|9795625|gb|AAF98443.1|AC021044_22 Hypothetical protein [Arabidopsis thaliana]
Length = 606
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 106/258 (41%), Gaps = 48/258 (18%)
Query: 170 EEELAFQDEEAARNKQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGR--YRDTPLRG 227
++EL + E +Q QAS QT +RQ + KR + R G+ +R P +G
Sbjct: 360 QDELILSETEQINIQQGQASYMQTLKRQAKVDSGKRMSTNFVIRRDPTGQCIFRPIPFKG 419
Query: 228 RRNYRMTELQGSDENDDANGDAGK--------------DSSSADERSTEVRPKRRKRWYG 273
R R + D+++ +G + K S E T +R + + R
Sbjct: 420 MRKVR----KHVDDDEGWSGGSKKVKVRGLTSSSGDGDSLSYPFENETTIRNREKDRLML 475
Query: 274 ARFSQSSSAAAGTDGGGDENDSEVHRESMGASV-GLIGPSERLAWGKGGIRSHTRHGS-- 330
F G + D ++S E M ++ L+ L WGK G RS R G+
Sbjct: 476 EIF--------GPESTDDSDESGTEEEFMETNLMSLVS----LQWGKRGKRS-MRKGTWK 522
Query: 331 ---VSGSNGKNARNNRLSKLVDYLQSLEEKDD---------QLDMHLVLVSLDEQRIPGL 378
+ G++ K Y ++L Q+D+ ++LVS+D IP L
Sbjct: 523 RHILENHVGQHKNTQDEVKNCLYCETLVHSFSILIGVVSMMQMDIQVLLVSMDASVIPNL 582
Query: 379 QQPYLCCRPTLSVRHLCQ 396
Q P + C+P ++++ LC+
Sbjct: 583 QNPQVSCKPNVTLKSLCE 600
>gi|297848954|ref|XP_002892358.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297338200|gb|EFH68617.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE-CPACRTHCA 143
+ VK +R CP+C I+R T+ ECLH FCR+CI + + E CP C
Sbjct: 3 MIKVKKETMRACFSCPLCDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLG 62
Query: 144 SR--RSLRDDLNYDALIAALYP 163
LR D N L A ++P
Sbjct: 63 GTPLEKLRPDHNLQDLRAKIFP 84
>gi|198414702|ref|XP_002129324.1| PREDICTED: similar to Polycomb complex protein BMI-1 (Polycomb
group RING finger protein 4) (RING finger protein 51)
[Ciona intestinalis]
Length = 1188
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
V +++ D+ V C +C G T++ECLH FCR CI + + CP CR
Sbjct: 5 VKLRVRDLHPHVTCHLCNGYFIDATTIIECLHSFCRTCIVRYLE-NRRSCPVCRVQVHKT 63
Query: 146 RSL---RDDLNYDALIAALYPDI 165
R L R D ++ L P +
Sbjct: 64 RPLLNIRSDQTLQDIVYKLVPGL 86
>gi|149028672|gb|EDL84013.1| ring finger protein 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 159
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|156551978|ref|XP_001602634.1| PREDICTED: hypothetical protein LOC100118736 [Nasonia vitripennis]
Length = 1304
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC--ASRRS 147
L ++ + CP+C G + TV+ECLH FCR CI K + N +CP C+ H ++ +
Sbjct: 10 LREVNPHLICPLCRGYLIDATTVVECLHSFCRSCILKHLN-KNAQCPTCK-HLLNTAKPN 67
Query: 148 LRDDLNYDALIAALYPDIDKYEEE 171
++ D ++ L P + Y +E
Sbjct: 68 IKADKALQDIVYKLVPGL--YHKE 89
>gi|224111060|ref|XP_002315733.1| predicted protein [Populus trichocarpa]
gi|222864773|gb|EEF01904.1| predicted protein [Populus trichocarpa]
Length = 419
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRT 140
+ V V+ +I + CP+C + R T+ ECLH FCR+CI K ++ + E CP C T
Sbjct: 5 QVVKVQREEIAACMTCPLCNKLFRDATTISECLHTFCRKCIYK--KITDEELDSCPVCDT 62
Query: 141 H--CASRRSLRDDLNYDALIAALY 162
C+ LR D ++ L A ++
Sbjct: 63 ELGCSPLEKLRADHSWQDLRAKIF 86
>gi|291415352|ref|XP_002723916.1| PREDICTED: ring finger protein 3 [Oryctolagus cuniculus]
Length = 242
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|350587274|ref|XP_003356878.2| PREDICTED: polycomb group RING finger protein 3-like [Sus scrofa]
Length = 202
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|428671775|gb|EKX72690.1| hypothetical protein BEWA_012490 [Babesia equi]
Length = 458
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 77 SGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECP 136
+ +G FV+ L+DI + C +C G+ TV EC+H FC+ C+ + CP
Sbjct: 172 TAEGLDIRFVLGILTDI---LSCRLCKGLFYNAHTVRECMHTFCKSCLILSTIECGLMCP 228
Query: 137 ACRTHCAS--RRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTF 194
C T + + D N L+ ++P ++ E E+ DE + +A +F
Sbjct: 229 TCFTPIPADILEGIEYDHNIQGLVDKIFPKFNEIESEQKKILDEIMGVSSTESTPMA-SF 287
Query: 195 QRQT 198
RQ+
Sbjct: 288 PRQS 291
>gi|403286806|ref|XP_003934663.1| PREDICTED: polycomb group RING finger protein 3 [Saimiri
boliviensis boliviensis]
Length = 275
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 39 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 89
>gi|395543302|ref|XP_003773558.1| PREDICTED: polycomb group RING finger protein 3 [Sarcophilus
harrisii]
Length = 259
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 23 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 73
>gi|354480425|ref|XP_003502408.1| PREDICTED: polycomb group RING finger protein 3-like [Cricetulus
griseus]
gi|344251876|gb|EGW07980.1| Polycomb group RING finger protein 3 [Cricetulus griseus]
gi|351704099|gb|EHB07018.1| Polycomb group RING finger protein 3 [Heterocephalus glaber]
Length = 241
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|149028673|gb|EDL84014.1| ring finger protein 3 (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 203
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|194209404|ref|XP_001488220.2| PREDICTED: polycomb group RING finger protein 3-like [Equus
caballus]
Length = 242
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|31742478|ref|NP_006306.2| polycomb group RING finger protein 3 [Homo sapiens]
gi|384475911|ref|NP_001245100.1| polycomb group RING finger protein 3 [Macaca mulatta]
gi|332263104|ref|XP_003280595.1| PREDICTED: polycomb group RING finger protein 3 isoform 1 [Nomascus
leucogenys]
gi|397480144|ref|XP_003811352.1| PREDICTED: polycomb group RING finger protein 3 isoform 1 [Pan
paniscus]
gi|402852538|ref|XP_003890977.1| PREDICTED: polycomb group RING finger protein 3 isoform 1 [Papio
anubis]
gi|402852540|ref|XP_003890978.1| PREDICTED: polycomb group RING finger protein 3 isoform 2 [Papio
anubis]
gi|426343538|ref|XP_004038353.1| PREDICTED: polycomb group RING finger protein 3 isoform 1 [Gorilla
gorilla gorilla]
gi|121942537|sp|Q3KNV8.1|PCGF3_HUMAN RecName: Full=Polycomb group RING finger protein 3; AltName:
Full=RING finger protein 3A
gi|76825323|gb|AAI07062.1| Polycomb group ring finger 3 [Homo sapiens]
gi|119603058|gb|EAW82652.1| polycomb group ring finger 3, isoform CRA_a [Homo sapiens]
gi|119603059|gb|EAW82653.1| polycomb group ring finger 3, isoform CRA_a [Homo sapiens]
gi|119603062|gb|EAW82656.1| polycomb group ring finger 3, isoform CRA_a [Homo sapiens]
gi|343960921|dbj|BAK62050.1| RING finger protein 3 [Pan troglodytes]
gi|355557419|gb|EHH14199.1| RING finger protein 3A [Macaca mulatta]
gi|355744818|gb|EHH49443.1| RING finger protein 3A [Macaca fascicularis]
gi|380784337|gb|AFE64044.1| polycomb group RING finger protein 3 [Macaca mulatta]
gi|383413781|gb|AFH30104.1| polycomb group RING finger protein 3 [Macaca mulatta]
gi|384940124|gb|AFI33667.1| polycomb group RING finger protein 3 [Macaca mulatta]
gi|410218840|gb|JAA06639.1| polycomb group ring finger 3 [Pan troglodytes]
gi|410250096|gb|JAA13015.1| polycomb group ring finger 3 [Pan troglodytes]
gi|410300194|gb|JAA28697.1| polycomb group ring finger 3 [Pan troglodytes]
gi|410339339|gb|JAA38616.1| polycomb group ring finger 3 [Pan troglodytes]
Length = 242
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|31044444|ref|NP_766304.2| polycomb group RING finger protein 3 [Mus musculus]
gi|325974486|ref|NP_001100715.2| polycomb group RING finger protein 3 [Rattus norvegicus]
gi|81897475|sp|Q8BTQ0.1|PCGF3_MOUSE RecName: Full=Polycomb group RING finger protein 3; AltName:
Full=RING finger protein 3A
gi|26354234|dbj|BAC40745.1| unnamed protein product [Mus musculus]
gi|29165843|gb|AAH49266.1| Pcgf3 protein [Mus musculus]
gi|187469279|gb|AAI67000.1| Pcgf3 protein [Rattus norvegicus]
Length = 241
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|348558585|ref|XP_003465098.1| PREDICTED: polycomb group RING finger protein 3-like [Cavia
porcellus]
Length = 241
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|148688165|gb|EDL20112.1| polycomb group ring finger 3, isoform CRA_d [Mus musculus]
Length = 249
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|380027905|ref|XP_003697655.1| PREDICTED: uncharacterized protein LOC100865279 [Apis florea]
Length = 1303
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
++LS + ++ C +C G T++ECLH FCR CI K + N CP C +
Sbjct: 10 LRLSKLNDQLTCKLCGGYFIDATTIIECLHSFCRSCIVKYLE-NNKYCPICEVQVHKSKP 68
Query: 148 L---RDDLNYDALIAALYP 163
L R D ++ L P
Sbjct: 69 LLNIRPDYTLQDIVYKLVP 87
>gi|449274339|gb|EMC83581.1| Polycomb group RING finger protein 3 [Columba livia]
Length = 250
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 14 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 64
>gi|2440074|emb|CAA04477.1| ring finger protein [Homo sapiens]
Length = 247
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 11 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 61
>gi|345798510|ref|XP_855151.2| PREDICTED: polycomb group RING finger protein 3 [Canis lupus
familiaris]
Length = 242
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|359477378|ref|XP_002280186.2| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Vitis vinifera]
Length = 429
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 63/137 (45%), Gaps = 11/137 (8%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECI-DKAMRLGNNECPACRTH--CASRRSLRDDLN 153
+ C IC + T+ ECLH FCR+CI DK + CP C T+ CA LR D N
Sbjct: 18 MTCRICNKLFDDATTISECLHTFCRKCIFDKITEDELDYCPVCNTNLGCAPLEKLRPDHN 77
Query: 154 YDALIAALYPDIDK--YEEEELAFQDEEAARNKQIQASIAQTFQR---QTEALGRKRTPK 208
L A ++P EE+A A R ++ +S+ + R QT G KRT
Sbjct: 78 LQDLTAKIFPSEKSKVVATEEVASVPLPARRKERSLSSLGVSTPRVSSQTVMTG-KRT-- 134
Query: 209 STSALRRSHGRYRDTPL 225
++A R S R P+
Sbjct: 135 KSAARRLSAARESTFPV 151
>gi|410958096|ref|XP_003985657.1| PREDICTED: polycomb group RING finger protein 3 [Felis catus]
Length = 242
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|345330019|ref|XP_001514398.2| PREDICTED: polycomb group RING finger protein 3-like
[Ornithorhynchus anatinus]
Length = 242
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|255073295|ref|XP_002500322.1| predicted protein [Micromonas sp. RCC299]
gi|226515584|gb|ACO61580.1| predicted protein [Micromonas sp. RCC299]
Length = 180
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 74 SRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLG-- 131
S + G KD V + + K V CPIC + TVMECLH FC ECI K+++ G
Sbjct: 2 SAAVNPGVKDT--PVDMDQLLKAVGCPICGEMFTHPVTVMECLHTFCHECIVKSVQPGRG 59
Query: 132 -NNECPAC 138
NN CP C
Sbjct: 60 ANNVCPTC 67
>gi|126332046|ref|XP_001366269.1| PREDICTED: polycomb group RING finger protein 3-like [Monodelphis
domestica]
Length = 242
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|428175643|gb|EKX44532.1| hypothetical protein GUITHDRAFT_163578 [Guillardia theta CCMP2712]
Length = 427
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSL 148
+ ++ +E +CPICL + RT C H FC ECI + ++ ++ECP+CRT +RR+L
Sbjct: 14 VEELIQETKCPICLDFLIDPRTA-PCQHNFCEECICEYIKDNHSECPSCRTPGTNRRTL 71
>gi|301778068|ref|XP_002924449.1| PREDICTED: polycomb group RING finger protein 3-like [Ailuropoda
melanoleuca]
gi|281343092|gb|EFB18676.1| hypothetical protein PANDA_013795 [Ailuropoda melanoleuca]
Length = 242
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|256087612|ref|XP_002579960.1| polycomb complex protein bmi-1 [Schistosoma mansoni]
gi|353229282|emb|CCD75453.1| putative polycomb complex protein bmi-1 [Schistosoma mansoni]
Length = 353
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 14/85 (16%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRT-------HCASRRSLR 149
+ C +C G + T++ECLH FCR CI ++L N CP C T HCA +R
Sbjct: 16 LTCNLCRGYLIDATTIVECLHSFCRSCILTYLKL-NTTCPVCATLLHKTKPHCA----IR 70
Query: 150 DDLNYDALIAALYPDIDKYEEEELA 174
D +++ L P++ +E+E L
Sbjct: 71 PDRALQSIVYKLIPNL--FEKEMLC 93
>gi|114052975|ref|NP_001040032.1| polycomb group RING finger protein 3 [Bos taurus]
gi|122136146|sp|Q2KJ29.1|PCGF3_BOVIN RecName: Full=Polycomb group RING finger protein 3
gi|86822076|gb|AAI05551.1| Polycomb group ring finger 3 [Bos taurus]
gi|440911090|gb|ELR60815.1| Polycomb group RING finger protein 3 [Bos grunniens mutus]
Length = 242
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|355709612|gb|AES03650.1| polycomb group ring finger 3 [Mustela putorius furo]
Length = 245
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 9 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 59
>gi|147772496|emb|CAN60778.1| hypothetical protein VITISV_032146 [Vitis vinifera]
Length = 391
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 63/137 (45%), Gaps = 11/137 (8%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECI-DKAMRLGNNECPACRTH--CASRRSLRDDLN 153
+ C IC + T+ ECLH FCR+CI DK + CP C T+ CA LR D N
Sbjct: 17 MTCRICNKLFDDATTISECLHTFCRKCIFDKITEDELDYCPVCNTNLGCAPLEKLRPDHN 76
Query: 154 YDALIAALYPDIDK--YEEEELAFQDEEAARNKQIQASIAQTFQR---QTEALGRKRTPK 208
L A ++P EE+A A R ++ +S+ + R QT G KRT
Sbjct: 77 LQDLTAKIFPSEKSKVVAPEEVASVPLPARRKERSLSSLGVSTPRVSSQTVMTG-KRT-- 133
Query: 209 STSALRRSHGRYRDTPL 225
++A R S R P+
Sbjct: 134 KSAARRLSAARESTFPV 150
>gi|118104286|ref|XP_424870.2| PREDICTED: polycomb group RING finger protein 3 [Gallus gallus]
Length = 242
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|307189309|gb|EFN73740.1| Polycomb group protein Psc [Camponotus floridanus]
Length = 1377
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC--ASRRS 147
L DI + + C +C G + T++ECLH FCR CI KA+ +CP+C+ H ++ +
Sbjct: 10 LRDINQHLVCLLCRGYLIDATTIVECLHSFCRSCILKALSTS-AQCPSCK-HALNKAKPN 67
Query: 148 LRDDLNYDALIAALYPDIDKYEEEEL 173
++ D ++ L P + Y E L
Sbjct: 68 IKADKALQEIVYKLVPGL--YHREML 91
>gi|390461119|ref|XP_002746106.2| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
3 [Callithrix jacchus]
Length = 323
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 87 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 137
>gi|390346383|ref|XP_787592.3| PREDICTED: polycomb group RING finger protein 3-like
[Strongylocentrotus purpuratus]
Length = 309
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 16/92 (17%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR-------- 139
V L +I + + C +C G + T+ ECLH FC+ C+ K + NN CP CR
Sbjct: 36 VFLYEINENITCKLCRGYLIDATTITECLHTFCKSCLVKYLE-ENNTCPTCRILIHQSHP 94
Query: 140 -THCASRRSLRDDLNYDALIAALYPDIDKYEE 170
T+ R+++D ++ L P++ K EE
Sbjct: 95 LTYVGFDRTMQD------IVYKLVPNLLKSEE 120
>gi|157128545|ref|XP_001661478.1| posterior sex combs protein [Aedes aegypti]
gi|108872543|gb|EAT36768.1| AAEL011178-PA [Aedes aegypti]
Length = 1348
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC-ASRR 146
V LS + + C +C G + T++ECLH FC CI K +R CP C ++
Sbjct: 41 VLLSSVNPYITCNLCKGYLIDATTIVECLHSFCHSCIMKHLR-TEQYCPQCEMMINKAKP 99
Query: 147 SLRDDLNYDALIAALYPDIDKYEEEEL 173
+++ D +++ L P + YE+E L
Sbjct: 100 NIKPDATLQSIVYKLVPGL--YEKELL 124
>gi|168036151|ref|XP_001770571.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678092|gb|EDQ64554.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE-CPACRTHCAS--RRSLRDDLN 153
+ CP+C +IR+ T+ ECLH FC+ CI + G +E CP C + LR D
Sbjct: 25 LTCPLCNYLIREATTISECLHTFCKACITAELSNGESECCPMCHVGLGTLPLEKLRADHQ 84
Query: 154 YDALIAALYPDIDKYEEEELAFQDEEAAR-NKQIQASIAQTFQRQTEALGRKRTPKSTSA 212
+ L L+P K + LA + K+ + S+ + T A+ + T A
Sbjct: 85 LNDLKEKLFPSNVKKRKLGLAIGSPGTSNATKRKERSLYSLGVKGTLAVNPGYANRKTRA 144
Query: 213 LRRSHG 218
L +HG
Sbjct: 145 LPGTHG 150
>gi|148688164|gb|EDL20111.1| polycomb group ring finger 3, isoform CRA_c [Mus musculus]
Length = 253
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 18 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 68
>gi|449513766|ref|XP_002187550.2| PREDICTED: polycomb group RING finger protein 3-like [Taeniopygia
guttata]
Length = 242
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|326507272|dbj|BAJ95713.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 521
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE----CPACRT 140
V+VK + + + CP+C ++R TV ECLH FCR+CI K N+E CP C
Sbjct: 103 LVMVKRELLARCMTCPLCNRLLRDATTVSECLHTFCRKCIYKKF---NDEEVESCPVCNI 159
Query: 141 H--CASRRSLRDDLNYDALIAALYP-DIDKYEEEELAFQDEEAARNKQIQASIA 191
C LR D + + + ++P K + E++A D + NK+ + SI+
Sbjct: 160 DLGCTPVEKLRADHSLHDVRSKIFPFKRKKIKAEDVASPD--SPPNKRKERSIS 211
>gi|297737160|emb|CBI26361.3| unnamed protein product [Vitis vinifera]
Length = 474
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 63/137 (45%), Gaps = 11/137 (8%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECI-DKAMRLGNNECPACRTH--CASRRSLRDDLN 153
+ C IC + T+ ECLH FCR+CI DK + CP C T+ CA LR D N
Sbjct: 63 MTCRICNKLFDDATTISECLHTFCRKCIFDKITEDELDYCPVCNTNLGCAPLEKLRPDHN 122
Query: 154 YDALIAALYPDIDK--YEEEELAFQDEEAARNKQIQASIAQTFQR---QTEALGRKRTPK 208
L A ++P EE+A A R ++ +S+ + R QT G KRT
Sbjct: 123 LQDLTAKIFPSEKSKVVATEEVASVPLPARRKERSLSSLGVSTPRVSSQTVMTG-KRT-- 179
Query: 209 STSALRRSHGRYRDTPL 225
++A R S R P+
Sbjct: 180 KSAARRLSAARESTFPV 196
>gi|255559945|ref|XP_002520991.1| ring finger protein, putative [Ricinus communis]
gi|223539828|gb|EEF41408.1| ring finger protein, putative [Ricinus communis]
Length = 520
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMR-LGNNECPACRTH 141
++ V VK I + CP+C +++ T+ ECLH FCR+CI K + G CP C
Sbjct: 3 NQVVKVKRDTIAACMTCPLCDMLLKDATTISECLHTFCRKCIYKKISDEGVECCPICNID 62
Query: 142 --CASRRSLRDDLNYDALIAALYP 163
C LR D N + A ++P
Sbjct: 63 LGCVPLEKLRPDHNLQDVRAKIFP 86
>gi|62857441|ref|NP_001016847.1| polycomb group RING finger protein 3 [Xenopus (Silurana)
tropicalis]
gi|123884065|sp|Q07G17.1|PCGF3_XENTR RecName: Full=Polycomb group RING finger protein 3
gi|115530807|emb|CAL49402.1| polycomb group ring finger 3 [Xenopus (Silurana) tropicalis]
gi|197246226|gb|AAI68795.1| polycomb group ring finger 3 [Xenopus (Silurana) tropicalis]
Length = 242
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|395734650|ref|XP_003776452.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
3 [Pongo abelii]
Length = 323
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 87 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 137
>gi|225437241|ref|XP_002275598.1| PREDICTED: E3 ubiquitin protein ligase DRIP2 [Vitis vinifera]
gi|297735508|emb|CBI17948.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACR 139
++ V V+ I + CP+C ++R T+ ECLH FCR+CI ++ + E CP C
Sbjct: 3 NQVVKVRRETIAACMTCPLCNKLLRDATTISECLHTFCRKCIYN--KISDEELECCPICN 60
Query: 140 TH--CASRRSLRDDLNYDALIAALYP 163
T C LR D N + A ++P
Sbjct: 61 TDLGCVPLEKLRPDHNLQDVRAKIFP 86
>gi|108709971|gb|ABF97766.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|222625413|gb|EEE59545.1| hypothetical protein OsJ_11819 [Oryza sativa Japonica Group]
Length = 510
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRTH- 141
V+VK + + + CP+C ++R TV ECLH FCR+CI + +L + E CP C+
Sbjct: 97 VMVKRELLARCMTCPLCGRLLRDATTVSECLHTFCRKCIYE--KLNDEEVESCPVCKIDL 154
Query: 142 -CASRRSLRDDLNYDALIAALYP 163
C LR D N + + ++P
Sbjct: 155 GCTPVEKLRADHNLQDVRSKIFP 177
>gi|363746252|ref|XP_003643585.1| PREDICTED: E3 ubiquitin-protein ligase RING2-B-like, partial
[Gallus gallus]
Length = 193
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 27/38 (71%)
Query: 132 NNECPACRTHCASRRSLRDDLNYDALIAALYPDIDKYE 169
N ECP CR S+RSLR D N+DALI+ +YP D+YE
Sbjct: 3 NKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYE 40
>gi|194390576|dbj|BAG62047.1| unnamed protein product [Homo sapiens]
Length = 324
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 88 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 138
>gi|428183799|gb|EKX52656.1| hypothetical protein GUITHDRAFT_57781, partial [Guillardia theta
CCMP2712]
Length = 67
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 98 QCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDD 151
QCP+C+ ++ V+ C HRFC C+ A G + CP CR C L DD
Sbjct: 3 QCPVCMHVLNNP-LVLSCGHRFCNSCVSAAAYFGQHSCPVCRKECV----LNDD 51
>gi|301789367|ref|XP_002930103.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Ailuropoda melanoleuca]
Length = 763
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + R G ++CP C+ + ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQRKGPSQCPLCKNNI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|242086134|ref|XP_002443492.1| hypothetical protein SORBIDRAFT_08g020500 [Sorghum bicolor]
gi|241944185|gb|EES17330.1| hypothetical protein SORBIDRAFT_08g020500 [Sorghum bicolor]
Length = 489
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE----CPACRT 140
+VK + + + CP+C ++RK T+ ECLH FCR+CI K + N+E CP C
Sbjct: 74 VAMVKRDLLLRCLTCPLCDRLLRKATTISECLHTFCRKCIYKKL---NDEDLDHCPVCNI 130
Query: 141 H--CASRRSLRDDLNYDALIAALYP 163
C LR D N + + ++P
Sbjct: 131 DLGCTPVDKLRADHNIQDVRSKVFP 155
>gi|326523247|dbj|BAJ88664.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 76 SSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE- 134
S+G G V+VK + + + + CP+C ++R T+ ECLH FCR+CI K + E
Sbjct: 25 SAGPG----VVMVKRAALVERLTCPLCRRLLRDAATITECLHTFCRKCISK--EFIDKEI 78
Query: 135 --CPACRTH--CASRRSLRDDLNYDALIAALYP 163
CP C CA LR D + + + ++P
Sbjct: 79 CYCPTCNIDLGCAPEEKLRVDHSLQYVRSKIFP 111
>gi|296486315|tpg|DAA28428.1| TPA: polycomb group RING finger protein 3 [Bos taurus]
Length = 179
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|350426618|ref|XP_003494492.1| PREDICTED: hypothetical protein LOC100746715 [Bombus impatiens]
Length = 1821
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE--CPACR 139
L D+ + CP+C+G + TV+ECLH FCR CI K + N E CP+C+
Sbjct: 10 LRDVNPYLICPLCIGYLIDATTVVECLHSFCRSCILKHL---NREAYCPSCK 58
>gi|332818893|ref|XP_003339483.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
3 [Pan troglodytes]
Length = 329
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 93 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 143
>gi|328793199|ref|XP_397419.4| PREDICTED: hypothetical protein LOC413984 [Apis mellifera]
Length = 1395
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
++LS + ++ C +C G T++ECLH FCR CI K + N CP C +
Sbjct: 10 LRLSKLNDQLTCKLCGGYFIDATTIIECLHSFCRSCIVKYLE-NNKYCPICEVQVHKSKP 68
Query: 148 L---RDDLNYDALIAALYP 163
L R D ++ L P
Sbjct: 69 LLNIRPDHTLQDIVYKLVP 87
>gi|383858055|ref|XP_003704518.1| PREDICTED: uncharacterized protein LOC100879416 [Megachile
rotundata]
Length = 1378
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
++LS + ++ C +C G T++ECLH FCR CI K + N CP C +
Sbjct: 10 LRLSKLNDQLTCKLCGGYFIDATTIIECLHSFCRSCIVKYLE-NNKYCPICEVQVHKSKP 68
Query: 148 L---RDDLNYDALIAALYP 163
L R D ++ L P
Sbjct: 69 LLNIRPDHTLQDIVYKLVP 87
>gi|350422954|ref|XP_003493340.1| PREDICTED: hypothetical protein LOC100746991 [Bombus impatiens]
Length = 1391
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
++LS + ++ C +C G T++ECLH FCR CI K + N CP C +
Sbjct: 10 LRLSKLNDQLTCKLCGGYFIDATTIIECLHSFCRSCIVKYLE-NNKYCPICEVQVHKSKP 68
Query: 148 L---RDDLNYDALIAALYP 163
L R D ++ L P
Sbjct: 69 LLNIRPDHTLQDIVYKLVP 87
>gi|298715142|emb|CBJ27830.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 890
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 74 SRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN 133
S S + E +E +L ++RK ++C +C +K R + +C H FC C++K+++ N
Sbjct: 812 SLSKVEEEDNEMRDAELGELRKMIKCSVCQDK-KKNRVITKCFHMFCDGCLEKSIKSRNR 870
Query: 134 ECPAC 138
+CPAC
Sbjct: 871 KCPAC 875
>gi|281211863|gb|EFA86025.1| hypothetical protein PPL_01258 [Polysphondylium pallidum PN500]
Length = 467
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDA 156
++CPIC ++ C H FC CI K N CP CR AS LR++ D
Sbjct: 5 LKCPICFDFFDTALMIITCSHNFCSLCIKKYFSQPNLHCPICR-KAASTSELRNNRLLDE 63
Query: 157 LIAALYPDIDK 167
L+ AL ++K
Sbjct: 64 LVTALKQTLEK 74
>gi|212274729|ref|NP_001130541.1| uncharacterized protein LOC100191640 [Zea mays]
gi|194689428|gb|ACF78798.1| unknown [Zea mays]
gi|223949863|gb|ACN29015.1| unknown [Zea mays]
gi|414868842|tpg|DAA47399.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 476
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 25/224 (11%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE----CPACRT 140
+VK + + + CP+C ++RK T+ ECLH FCR CI + N+E CP C+
Sbjct: 68 VAMVKRELLARCLTCPLCDRLLRKATTISECLHTFCRNCIYNKI---NDEDLDHCPVCKI 124
Query: 141 H--CASRRSLRDDLNYDALIAALYPDIDK---YEEEELAFQDEEAARNKQIQASIAQTFQ 195
C LR D N + + ++P K EE E + + I + + T
Sbjct: 125 DLGCTPVDKLRADHNIQDVRSKVFPFKRKKVNAEEAESPIMLPVKVKERSISSLVVNT-- 182
Query: 196 RQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSSS 255
+ TP +++ R + LRG + L+ D+ N + D+SS
Sbjct: 183 -------PRVTPAASTGRRTRVVTRKAAALRGLGPIIVDPLK----KDNDNSNKQTDNSS 231
Query: 256 ADERSTEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHR 299
+ +++ RR+ S S D D + SE+ +
Sbjct: 232 LLDSLSKIPQTRRQLLSNGDTSSHPSVKDKADDNKDFDKSELWK 275
>gi|302784943|ref|XP_002974243.1| hypothetical protein SELMODRAFT_414577 [Selaginella moellendorffii]
gi|300157841|gb|EFJ24465.1| hypothetical protein SELMODRAFT_414577 [Selaginella moellendorffii]
Length = 946
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLR 149
L +E++CPICL + ++ V+ C H FC+ CI +++ G CP C+ A+RR +R
Sbjct: 5 LERFGRELKCPICLSLFQQA-AVLSCTHCFCKPCILTSLK-GMPFCPVCKVP-ATRREVR 61
Query: 150 DDLNYDALIAALYPDID 166
D ++ +Y DI+
Sbjct: 62 PSPKMDNVV-GIYRDIE 77
>gi|242033011|ref|XP_002463900.1| hypothetical protein SORBIDRAFT_01g008520 [Sorghum bicolor]
gi|241917754|gb|EER90898.1| hypothetical protein SORBIDRAFT_01g008520 [Sorghum bicolor]
Length = 336
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 26/188 (13%)
Query: 90 LSDIRKE-----VQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE----CPACRT 140
L+ +R+E + CP+C G++R + CLH FCRECI M N+E CP C
Sbjct: 7 LARVRREALAACMTCPLCRGLLRAATAITLCLHTFCRECI---MEKINDEEVDCCPVCDI 63
Query: 141 H--CASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIA---QTFQ 195
C LR D N + ++P + A A R ++ +S+ +
Sbjct: 64 DLGCDPEEKLRPDHNLQDIRNKVFPIKKINVDAPKAVTILPAKRKQRSLSSLVVDTPSVV 123
Query: 196 RQTEALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSSS 255
++T G++ T A RR+ +P+ N +L EN D + S S
Sbjct: 124 KRTSLTGKR-----TKAKRRAASSRATSPV----NNGTMKLPIKSENRDQKTEKSSASQS 174
Query: 256 ADERSTEV 263
R+T+V
Sbjct: 175 TKVRNTDV 182
>gi|358255849|dbj|GAA57479.1| polycomb group RING finger protein 4 [Clonorchis sinensis]
Length = 112
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 13/104 (12%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR---SLR 149
I + C +C G + T++ECLH FCR CI ++L + CP C T R ++R
Sbjct: 12 INPMLTCKLCNGYLIDATTIVECLHSFCRSCILSYLKL-HTTCPICDTLLHKTRPHYAIR 70
Query: 150 DDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQT 193
D A++ L P++ F+ E + R + + I++T
Sbjct: 71 PDRALQAMVYKLIPNL---------FEKEMSCRREFFKGMISKT 105
>gi|61740517|ref|NP_001013434.1| breast cancer type 1 susceptibility protein homolog [Canis lupus
familiaris]
gi|2501720|sp|Q95153.1|BRCA1_CANFA RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|1620568|gb|AAC48663.1| similar to the human breast and ovarian cancer susceptibility gene
BRCA1 product [Canis lupus familiaris]
Length = 1878
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + R G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQRKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE-EEELAFQD 177
L++ + L+ L I +E + L F D
Sbjct: 73 LQESTRFSQLVEELLKIIHAFELDTGLQFAD 103
>gi|291230597|ref|XP_002735252.1| PREDICTED: ring finger protein 110-like [Saccoglossus kowalevskii]
Length = 345
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 7/113 (6%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FCR CI + + + CP C T R
Sbjct: 57 LKMTELNPHLMCVLCGGYFIDATTIIECLHSFCRTCIIRYLE-SSKYCPVCDTQVHKTRP 115
Query: 148 L---RDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQ 197
L R D ++ L P + + +E+ + E A N ++ F RQ
Sbjct: 116 LQYIRPDRTLQNIVYKLVPGLFR---DEMKRRREYYAANPSAKSKPTHRFSRQ 165
>gi|242787204|ref|XP_002480957.1| ATP-dependent protease (CrgA), putative [Talaromyces stipitatus
ATCC 10500]
gi|218721104|gb|EED20523.1| ATP-dependent protease (CrgA), putative [Talaromyces stipitatus
ATCC 10500]
Length = 630
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 21/123 (17%)
Query: 55 PQDSTPAAAADVDGNESDRSRSSGDGEK---DEFVIVKLSD-IRKEVQCPICLGIIRKTR 110
P D+ D DG D + DG DE + KL + IR+E+ C +C G+I
Sbjct: 243 PYDAKDVVYYDKDGVIVDEEKPLNDGPSTKLDEVIFEKLGNGIREELDCQVCYGLIIDP- 301
Query: 111 TVMECLHRFCRECIDKAMRLGNNECPACR--THCASRRS-------LRDDLNYDALIAAL 161
+ C H FC EC+++ +R +N CP CR + + R LRD LN +L
Sbjct: 302 CISSCGHSFCYECVNR-IRDNSNLCPLCRKKMYLSFREGSNPVHNVLRDLLN------SL 354
Query: 162 YPD 164
+PD
Sbjct: 355 FPD 357
>gi|157128543|ref|XP_001661477.1| ring finger protein [Aedes aegypti]
gi|108872542|gb|EAT36767.1| AAEL011179-PA [Aedes aegypti]
Length = 276
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTH---CASR 145
K+ D + C +C G + + T+ +CLH FCR CI + + GN CP C+++ +
Sbjct: 39 KVKDFNDSITCSLCNGYLIEATTINDCLHTFCRSCIVRHLE-GNKYCPKCKSYNNKTITV 97
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELA 174
+LR D +L+ L P + + E + A
Sbjct: 98 ANLRPDRILRSLVYKLVPGLHRSENQRAA 126
>gi|403223896|dbj|BAM42026.1| uncharacterized protein TOT_040000402 [Theileria orientalis strain
Shintoku]
Length = 406
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
I KE +CPICL ++ K T C H FC++CIDK + + N CP C+
Sbjct: 3 IPKEFECPICLNLLFKPVTT-SCGHNFCKQCIDKTLLVTQN-CPICK 47
>gi|356503576|ref|XP_003520583.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
Length = 445
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECI-DKAMRLGNNECPACRTH 141
++ V V+ + I + CP+C + R+ T+ ECLH FCR+CI DK CP C
Sbjct: 19 NQVVKVRRNTIVACMTCPLCNKLFREATTISECLHTFCRKCIYDKITDEEIECCPICNID 78
Query: 142 --CASRRSLRDDLNYDALIAALYP-DIDKYEEEELAFQDEEAARNKQ--IQASIAQTFQR 196
C LR D + + A ++P K + E+ AR K+ + + + T +
Sbjct: 79 LGCVPLEKLRPDHSLQDVRAKVFPLKGRKVKAPEVVTSVPLPARRKERSLSSLVVSTPRV 138
Query: 197 QTEA--LGRKRTPKSTSALRRSHGRYRDTPLR 226
T+A GR+ P ++ RS + P++
Sbjct: 139 STQAAMTGRRTKPTRKASGLRSTSFSIEKPIK 170
>gi|354466008|ref|XP_003495468.1| PREDICTED: E3 ubiquitin-protein ligase DTX3L-like [Cricetulus
griseus]
gi|344240318|gb|EGV96421.1| Protein deltex-3-like [Cricetulus griseus]
Length = 763
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 57 DSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECL 116
D TP D+D N+S+ + + G D +K ++ E C IC+ IR R + +C
Sbjct: 546 DETPM---DIDENDSNAAVPTLRGSADSSGALKANET--EDYCVICMDTIRNKRVLSKCK 600
Query: 117 HRFCRECIDKAMRLGNNECPACRTHCASRRSLRDD 151
H FC CI KAM L CP C+T +R + D
Sbjct: 601 HEFCTSCITKAMSL-KPVCPVCQTSYGIQRGNQPD 634
>gi|383847579|ref|XP_003699430.1| PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Megachile
rotundata]
Length = 481
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 74 SRSSGDGEKDEFVIVKLSDIRKE-VQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGN 132
++ S D + E V+ K+ DI E + C IC + + T + C+H FC CI+ ++
Sbjct: 363 TQVSADPSQTENVLHKVDDIMDEQLTCSICSELFVQA-TTLSCMHTFCHHCINSWIK-KR 420
Query: 133 NECPACRTHCAS-RRSLRDDLNYDALIAAL 161
NECP CRT S RSL D D++I L
Sbjct: 421 NECPVCRTPVTSMNRSLVLDNFIDSIIENL 450
>gi|414868841|tpg|DAA47398.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 450
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 90/219 (41%), Gaps = 19/219 (8%)
Query: 87 IVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECI-DKAMRLGNNECPACRTH--CA 143
+VK + + + CP+C ++RK T+ ECLH FCR CI +K + CP C+ C
Sbjct: 70 MVKRELLARCLTCPLCDRLLRKATTISECLHTFCRNCIYNKINDEDLDHCPVCKIDLGCT 129
Query: 144 SRRSLRDDLNYDALIAALYPDIDK---YEEEELAFQDEEAARNKQIQASIAQTFQRQTEA 200
LR D N + + ++P K EE E + + I + + T
Sbjct: 130 PVDKLRADHNIQDVRSKVFPFKRKKVNAEEAESPIMLPVKVKERSISSLVVNT------- 182
Query: 201 LGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSSSADERS 260
+ TP +++ R + LRG + L+ D+ N + D+SS +
Sbjct: 183 --PRVTPAASTGRRTRVVTRKAAALRGLGPIIVDPLK----KDNDNSNKQTDNSSLLDSL 236
Query: 261 TEVRPKRRKRWYGARFSQSSSAAAGTDGGGDENDSEVHR 299
+++ RR+ S S D D + SE+ +
Sbjct: 237 SKIPQTRRQLLSNGDTSSHPSVKDKADDNKDFDKSELWK 275
>gi|224082740|ref|XP_002306821.1| predicted protein [Populus trichocarpa]
gi|222856270|gb|EEE93817.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMR-LGNNECPACRTH--C 142
V V+ I + CP+C ++R T+ ECLH FCR+CI + + G + CP C + C
Sbjct: 11 VKVRRETIEACMTCPLCNKLLRDATTISECLHTFCRKCIYQRISDEGLDSCPICNINLGC 70
Query: 143 ASRRSLRDDLNYDALIAALYP 163
LR D N + + ++P
Sbjct: 71 IPLEKLRPDHNLQDVRSKIFP 91
>gi|168051407|ref|XP_001778146.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670468|gb|EDQ57036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 573
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE-CPACRTHCAS--RRSLRDDLN 153
+ CP+C +I + T+ ECLH FC++CI + G +E CP C + LR D
Sbjct: 25 LTCPLCNYLIWEATTISECLHTFCKDCIAAELTNGESECCPVCHVGLGTLPLEKLRADHQ 84
Query: 154 YDALIAALYPDIDKYEEEELAFQDEE---AARNKQIQASIAQTFQRQTEALGRKRTP 207
+ L L+P K + L E A R K +R +LG K TP
Sbjct: 85 LNDLKEKLFPSNVKKRKLGLVLGSPETSNATRRK----------ERSLYSLGVKGTP 131
>gi|354500950|ref|XP_003512559.1| PREDICTED: E3 ubiquitin-protein ligase DTX3L-like [Cricetulus
griseus]
Length = 681
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 57 DSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECL 116
D TP +DGN+S+ + G D +K ++ E C IC+ +I R + +C
Sbjct: 515 DETPMG---IDGNDSNAAVPPLRGSADSSGALKANET--EDDCVICMNVISNKRVLSKCK 569
Query: 117 HRFCRECIDKAMRLGNNECPACRTHCASRRSLRDD 151
H FC CI KAM L CP C+T +R + D
Sbjct: 570 HEFCTSCITKAMSL-KPVCPVCQTSYGIQRGNQPD 603
>gi|402593600|gb|EJW87527.1| hypothetical protein WUBG_01563 [Wuchereria bancrofti]
Length = 186
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC---- 138
DE+ I+ L + + CP+C G + TV +CLH FC+ C+ K NN CP C
Sbjct: 10 DEYKIL-LKTLNPHITCPLCKGYFIEATTVTDCLHTFCKSCLLKHFENVNNCCPKCSNLI 68
Query: 139 -RTHCASRRSLRDDLNYDALIAALYPDIDKYEEE 171
++H + S D L+ L P + EEE
Sbjct: 69 HQSHPSHYVSF--DRTMQELVYKLVPGVQIREEE 100
>gi|242037795|ref|XP_002466292.1| hypothetical protein SORBIDRAFT_01g005090 [Sorghum bicolor]
gi|241920146|gb|EER93290.1| hypothetical protein SORBIDRAFT_01g005090 [Sorghum bicolor]
Length = 383
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 18/193 (9%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRTH- 141
V+++ S + + CP+C + R T+ ECLH FCR+CI + N E CP C H
Sbjct: 32 VMLRRSSLAACLTCPLCGRLFRDAATITECLHTFCRKCISE--EFINKEVCCCPICSIHL 89
Query: 142 -CASRRSLRDDLNYDALIAALYP-DIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQT- 198
CA LR D + + + ++P K E+ E+ + K+ S Q
Sbjct: 90 GCAPLEKLRIDHSLQYVRSKVFPFKKQKVEDPEVTSPITSPIKTKERSLSSLTKHAPQMS 149
Query: 199 --EALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSSSA 256
+ L ++RT S LR+ + LRG N +T+ G + A K+ S
Sbjct: 150 MQKCLTKRRT--KASCLRKLP---LHSTLRGSSN--ITKKSGGWRPLGCHFRAAKNKKSL 202
Query: 257 DERSTEVRPKRRK 269
+S +V+ +K
Sbjct: 203 RSKSEDVKTAEKK 215
>gi|346468437|gb|AEO34063.1| hypothetical protein [Amblyomma maculatum]
Length = 552
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 14/110 (12%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSL 148
KL ++ + + C +C G T++ECLH FC+ CI K + + + CP C R L
Sbjct: 8 KLIELNEHLTCVLCGGYFVDATTIIECLHSFCKTCIVKYLEV-HKMCPVCDVQVHKTRPL 66
Query: 149 ---RDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQ 195
R D ++ L P + K E R +Q AS+A + +
Sbjct: 67 QNIRSDQTLQDIVYKLVPGLYK----------NEMRRRRQYYASLAPSVR 106
>gi|118386059|ref|XP_001026151.1| zinc finger protein [Tetrahymena thermophila]
gi|89307918|gb|EAS05906.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 1075
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRT 140
K+ ++R +QC C G K + +CLH FCRECIDK +RL CP CRT
Sbjct: 1012 KIQNMRLLLQCS-C-GQNFKDTILQKCLHPFCRECIDKQIRLRQRTCPKCRT 1061
>gi|327266650|ref|XP_003218117.1| PREDICTED: zinc finger protein RFP-like [Anolis carolinensis]
Length = 697
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+E+ CPICLG +K ++ C H FC+ C+D+ CP CR
Sbjct: 12 EELACPICLGYFKKPVMIISCGHNFCQSCLDQCWEGKEASCPQCR 56
>gi|6978573|ref|NP_036646.1| breast cancer type 1 susceptibility protein homolog [Rattus
norvegicus]
gi|41688427|sp|O54952.1|BRCA1_RAT RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|2695691|gb|AAC36493.1| BRCA1 [Rattus norvegicus]
Length = 1817
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LHAMQKILECPICLELIKEPVST-QCDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L+ + L+ L ID +E
Sbjct: 73 LQGSARFSQLVEELLKIIDAFE 94
>gi|270339500|ref|YP_003331582.1| ubiquitin E3 ligase ICP0 [Felid herpesvirus 1]
gi|2502079|gb|AAB80763.1| ubiquitin E3 ligase ICP0 [Felid herpesvirus 1]
Length = 498
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 98 QCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR-RSLRDD 151
CPICL + M CLH+FC C+ + + L NN+CP C+T S S+ DD
Sbjct: 7 HCPICLDPMNDLTFTMPCLHKFCYSCLSRWVGL-NNKCPLCKTSVTSLIHSIEDD 60
>gi|40539033|gb|AAR87290.1| expressed protein [Oryza sativa Japonica Group]
gi|108711005|gb|ABF98800.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|125587873|gb|EAZ28537.1| hypothetical protein OsJ_12518 [Oryza sativa Japonica Group]
Length = 439
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECI-DKAMRLGNNECPACRTH--CASRRSLRDDLN 153
+ CP+C G++R+ + ECLH FC+ECI +K + CP C C LR D N
Sbjct: 20 MTCPLCKGLLREATAITECLHTFCKECIMEKIDDEEVDHCPVCNIDLGCDPEEKLRPDHN 79
Query: 154 YDALIAALYP 163
+ ++P
Sbjct: 80 VQDIRNKVFP 89
>gi|291406195|ref|XP_002719221.1| PREDICTED: breast cancer 1, early onset [Oryctolagus cuniculus]
Length = 761
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE-EEELAFQDE--------EAARNKQIQASIAQTFQRQT 198
L++ + L+ L I +E + L F + + +++ SI Q+ +
Sbjct: 73 LQESTRFSQLVEELLKMIQAFELDTGLPFANSYDFSKKKNNSPEHQKEDVSIIQSIGYRN 132
Query: 199 EALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSS 254
A G ++ L+ + + + L R+ R T Q +N + G DSS
Sbjct: 133 RAKGLRKIEPKNPTLQETSLSVQVSDLGIVRSLRTTH-QIQPQNKSVYIELGSDSS 187
>gi|410981211|ref|XP_003996966.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Felis catus]
Length = 1873
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + R G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQRKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLNIIHAFE 94
>gi|324507449|gb|ADY43157.1| Polycomb group RING finger protein 3 [Ascaris suum]
Length = 250
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC---- 138
DE+ I+ L + + CPIC G + TV+ECLH FC+ C+ K +N CP C
Sbjct: 20 DEYKIL-LRTLNPHITCPICKGYFIEATTVIECLHTFCKSCLLKHFENESNCCPKCSGLI 78
Query: 139 -RTHCASRRSLRDDLNYDALIAALYPDIDKYEEE 171
++H + S D L+ L P + EEE
Sbjct: 79 HQSHPSHYVSF--DRTMQELVYKLVPGLQAREEE 110
>gi|449434236|ref|XP_004134902.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cucumis
sativus]
Length = 1100
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 96 EVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYD 155
E++CPICL ++ T + + C H FC CI+K+M+ G+N CP C+ RR +R + D
Sbjct: 13 ELKCPICLSLLNSTVS-LGCNHVFCNVCIEKSMKSGSN-CPVCKVP-YRRREVRPAPHMD 69
Query: 156 ALIA 159
L++
Sbjct: 70 NLVS 73
>gi|125545675|gb|EAY91814.1| hypothetical protein OsI_13455 [Oryza sativa Indica Group]
Length = 439
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECI-DKAMRLGNNECPACRTH--CASRRSLRDDLN 153
+ CP+C G++R+ + ECLH FC+ECI +K + CP C C LR D N
Sbjct: 20 MTCPLCKGLLREATAITECLHTFCKECIMEKIDDEEVDHCPVCNIDLGCDPEEKLRPDHN 79
Query: 154 YDALIAALYP 163
+ ++P
Sbjct: 80 VQDIRNKVFP 89
>gi|356570616|ref|XP_003553481.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
Length = 428
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECI-DKAMRLGNNECPACRTH 141
++ V V+ I + CP+C + R+ T+ ECLH FCR+CI DK CP C
Sbjct: 3 NQVVKVRRDTIAACMTCPLCGKLFREATTISECLHTFCRKCIYDKITDEEIECCPICNID 62
Query: 142 --CASRRSLRDDLNYDALIAALYP-DIDKYEEEELAFQDEEAARNKQ--IQASIAQTFQR 196
C LR D + + A ++P K + E+ AR K+ + + + T +
Sbjct: 63 LGCVPLEKLRPDHSLQDVRAKVFPLKGRKVKAPEVVTSVPLPARRKERSLSSLVVSTPRV 122
Query: 197 QTEA--LGRKRTPKSTSALRRSHGRYRDTPLR 226
T+A GR+ P ++ RS + P++
Sbjct: 123 STQATMTGRRTKPTRKASGLRSTSFSIEKPIK 154
>gi|340723907|ref|XP_003400328.1| PREDICTED: hypothetical protein LOC100651499 [Bombus terrestris]
Length = 1412
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE--CPACR 139
L ++ + CP+C+G + TV+ECLH FCR CI K + N E CP+C+
Sbjct: 10 LREVNPYLICPLCIGYLIDATTVVECLHSFCRSCILKHL---NREAHCPSCK 58
>gi|338172907|gb|AEI83222.1| ring finger protein [Dimocarpus longan]
Length = 103
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 175 FQDEEAARNKQIQASIAQTFQRQTEALGRKRTP-KSTSALRRSHGRYRDTPLRGRRNYRM 233
F +EE RNKQIQASIAQ FQRQ+EAL ++RTP K + + R R R RR R
Sbjct: 1 FHEEERTRNKQIQASIAQIFQRQSEALVKRRTPCKDNTFVTRPQRNARSAQSRRRRIGRG 60
Query: 234 TELQGS-DENDDANGDAGKDSSSADE 258
E GS D D+ + + GKDSSS DE
Sbjct: 61 AEHHGSEDNEDENDDNGGKDSSSNDE 86
>gi|414871833|tpg|DAA50390.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 526
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE-CPACRTH-- 141
V+VK + + + CP+C ++R T+ ECLH FCR+CI + E CP C+
Sbjct: 99 VVMVKRDLLARCMTCPLCRRLLRDATTISECLHTFCRKCIYQKFDDEEVECCPVCKIDLG 158
Query: 142 CASRRSLRDDLNYDALIAALYP 163
C LR D + + + L+P
Sbjct: 159 CTPTEKLRADHSLQDVRSKLFP 180
>gi|301614743|ref|XP_002936851.1| PREDICTED: polycomb group RING finger protein 6-like [Xenopus
(Silurana) tropicalis]
Length = 296
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 80 GEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
GE +E +I L+D+ + C IC G + T+ ECLH FC+ CI K N CP C
Sbjct: 62 GEAEEHMI-NLTDLNPYILCSICKGYLIDATTITECLHTFCKSCIVKHFYY-TNRCPKCN 119
Query: 140 THCASRRSL---RDDLNYDALIAALYPDIDKYEEEEL-AFQDE 178
+ L R D ++ L D+++ E+ ++ AF E
Sbjct: 120 IVVHQTQPLYNIRLDRQLQDIVFKLVVDLEQREKNQMYAFYKE 162
>gi|149054321|gb|EDM06138.1| rCG34321, isoform CRA_b [Rattus norvegicus]
Length = 1550
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LHAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L+ + L+ L ID +E
Sbjct: 73 LQGSARFSQLVEELLKIIDAFE 94
>gi|307189311|gb|EFN73742.1| Polycomb complex protein BMI-1-B [Camponotus floridanus]
Length = 371
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLR 149
+ D+ + + CP+C G + T++ECLH FCR CI + + G CP C A+ L
Sbjct: 141 VKDLNEHIVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSSGARACPVCNV--AASPPLL 198
Query: 150 DDLNYDALIAALYPDIDKYEEE 171
D L+ P + + E E
Sbjct: 199 PDTRLQRLVYLAVPGLFRSELE 220
>gi|449490725|ref|XP_004158688.1| PREDICTED: LOW QUALITY PROTEIN: protein BREAST CANCER
SUSCEPTIBILITY 1 homolog [Cucumis sativus]
Length = 1072
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 96 EVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYD 155
E++CPICL ++ T + + C H FC CI+K+M+ G+N CP C+ RR +R + D
Sbjct: 13 ELKCPICLSLLNSTVS-LGCNHVFCNVCIEKSMKSGSN-CPVCKVP-YRRREVRPAPHMD 69
Query: 156 ALIA 159
L++
Sbjct: 70 NLVS 73
>gi|395857624|ref|XP_003804043.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
3 [Otolemur garnettii]
Length = 291
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
V+L DI + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 55 VRLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 105
>gi|156372680|ref|XP_001629164.1| predicted protein [Nematostella vectensis]
gi|156216158|gb|EDO37101.1| predicted protein [Nematostella vectensis]
Length = 241
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRT---HCAS 144
+ ++ + + + C +C G + T++ECLH FCR CI K + NN CP C H
Sbjct: 6 MSMNQVNEHITCKLCNGYLIDATTIIECLHTFCRSCIVKYLH-ENNHCPTCNVFLHHSHP 64
Query: 145 RRSLRDDLNYDALIAALYPDIDKYE 169
+ D ++ L P + ++E
Sbjct: 65 MNYISADRTMQEIVFKLVPGLQEWE 89
>gi|395749268|ref|XP_003778916.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
2 [Pongo abelii]
Length = 385
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|344252189|gb|EGW08293.1| Protein deltex-3-like [Cricetulus griseus]
Length = 872
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 57 DSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECL 116
D TP +DGN+S+ + G D +K ++ E C IC+ +I R + +C
Sbjct: 515 DETPMG---IDGNDSNAAVPPLRGSADSSGALKANE--TEDDCVICMNVISNKRVLSKCK 569
Query: 117 HRFCRECIDKAMRLGNNECPACRTHCASRRSLRDD 151
H FC CI KAM L CP C+T +R + D
Sbjct: 570 HEFCTSCITKAMSL-KPVCPVCQTSYGIQRGNQPD 603
>gi|440893907|gb|ELR46515.1| Breast cancer type 1 susceptibility protein-like protein [Bos
grunniens mutus]
Length = 1838
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|332375530|gb|AEE62906.1| unknown [Dendroctonus ponderosae]
Length = 225
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+KL + + C IC G + TV ECLH FC+ C+ K + NN CP C+
Sbjct: 7 IKLKTLNNHITCKICRGYLIDATTVTECLHTFCKSCLVKHLE-ENNTCPTCKIVIHQSHP 65
Query: 148 LR---DDLNYDALIAALYPDIDKYEEE 171
L+ D ++ L PD+ K E E
Sbjct: 66 LQYISFDRTMQDIVYKLVPDLQKNEIE 92
>gi|198422095|ref|XP_002129149.1| PREDICTED: similar to polycomb group ring finger 1 [Ciona
intestinalis]
Length = 321
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC 142
D+ + +KL+D+ + C IC G + T+ ECLH FC+ CI K + + CP C
Sbjct: 113 DDEIKIKLADLNIHISCKICCGYLVDATTITECLHSFCKSCITKHLAVYLT-CPICDVKL 171
Query: 143 AS---RRSLRDDLNYDALIAALYPDIDKYE 169
+ S++ D+ ++ L P I E
Sbjct: 172 QNANIYSSVKADIVLQDIVDKLLPGIQTME 201
>gi|156547031|ref|XP_001601096.1| PREDICTED: hypothetical protein LOC100116657 [Nasonia vitripennis]
Length = 1468
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSL- 148
LS + +++ C +C G T++ECLH FC+ CI K + N CP C + L
Sbjct: 11 LSTLNEQLTCKLCGGYFIDATTIIECLHSFCKSCIVKYLE-SNKFCPVCDAQVHKNKPLS 69
Query: 149 --RDDLNYDALIAALYP 163
R D ++ L P
Sbjct: 70 NIRPDQTLQDIVYKLVP 86
>gi|260809325|ref|XP_002599456.1| hypothetical protein BRAFLDRAFT_223875 [Branchiostoma floridae]
gi|229284735|gb|EEN55468.1| hypothetical protein BRAFLDRAFT_223875 [Branchiostoma floridae]
Length = 280
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 21/142 (14%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+ ++++ + C IC G T++ECLH FC+ CI K + + CP C R
Sbjct: 7 LPITELNPHLMCVICGGYFIDATTIIECLHSFCKTCIVKYLD-TSKYCPVCDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDK------------YEEEELAFQDEEAARNKQIQAS--- 189
L R D +L+ L P++ K Y +++LA EE + +Q
Sbjct: 66 LLNIRADKTLQSLVYKLVPNLFKDEMKRRRDFYGQYPDQDLAASSEERGEVEDLQIYTPD 125
Query: 190 --IAQTFQRQTEALGRKRTPKS 209
I+ + + E + +PKS
Sbjct: 126 EHISLSLEYYREPEKQDTSPKS 147
>gi|149054320|gb|EDM06137.1| rCG34321, isoform CRA_a [Rattus norvegicus]
Length = 1817
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LHAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L+ + L+ L ID +E
Sbjct: 73 LQGSARFSQLVEELLKIIDAFE 94
>gi|12275860|gb|AAG50165.1|AF230386_1 tripartite motif protein TRIM31 alpha [Homo sapiens]
Length = 425
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA--MRLGNNECPACRTHCASRRS 147
++ +++EV CPICL I++K T+ +C H FC +CI + G +CP C+T S R
Sbjct: 7 VNKLQEEVICPICLDILQKPVTI-DCGHNFCPQCITQIGETSCGFFKCPLCKT---SVR- 61
Query: 148 LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAA 181
RD + +++L+ L I + E+ + +EA
Sbjct: 62 -RDAIRFNSLLRNLVEKIQALQASEVQSKRKEAT 94
>gi|119580931|gb|EAW60527.1| polycomb group ring finger 2, isoform CRA_a [Homo sapiens]
gi|119580934|gb|EAW60530.1| polycomb group ring finger 2, isoform CRA_a [Homo sapiens]
Length = 257
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|114667779|ref|XP_511440.2| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Pan
troglodytes]
gi|397477039|ref|XP_003809893.1| PREDICTED: polycomb group RING finger protein 2 isoform 1 [Pan
paniscus]
gi|397477041|ref|XP_003809894.1| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Pan
paniscus]
gi|410051474|ref|XP_003953100.1| PREDICTED: polycomb group RING finger protein 2 [Pan troglodytes]
gi|410210824|gb|JAA02631.1| polycomb group ring finger 2 [Pan troglodytes]
gi|410293958|gb|JAA25579.1| polycomb group ring finger 2 [Pan troglodytes]
Length = 344
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|344299166|ref|XP_003421258.1| PREDICTED: E3 ubiquitin-protein ligase TRIM11-like [Loxodonta
africana]
Length = 600
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 92 DIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE--CPACRTHCASRRSLR 149
D++ E CPICL + + + + C H FCR C+D++ +G+ CP CR CA+ RSLR
Sbjct: 9 DLQDEATCPICLDLFSEPVS-LGCGHNFCRACVDRSRGVGDAPFLCPECRKPCAT-RSLR 66
Query: 150 DDLNYDALIAAL 161
+ + AL
Sbjct: 67 PNRPLGRVATAL 78
>gi|71027873|ref|XP_763580.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350533|gb|EAN31297.1| hypothetical protein TP03_0552 [Theileria parva]
Length = 735
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCAS 144
F + L DI + CP+C G+ +T+ +C+H FC+ C+ + CP C + S
Sbjct: 261 FNLTILIDI---LTCPLCKGLFHNAQTIRDCMHTFCKSCLILSTFENGLVCPTCFSPILS 317
Query: 145 RRS--LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASI 190
+ + D N ++ L+P + + E DE R K + S+
Sbjct: 318 SITEGVEPDTNIQTIVDKLFP---HFAQNEQKLIDEMKERKKNYKISL 362
>gi|348562307|ref|XP_003466952.1| PREDICTED: polycomb group RING finger protein 2-like [Cavia
porcellus]
Length = 344
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|344285955|ref|XP_003414725.1| PREDICTED: polycomb group RING finger protein 2 [Loxodonta
africana]
Length = 344
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|29647953|gb|AAO92399.1|AF479649_1 breast and ovarian cancer susceptibility protein variant
BRCA1-delta 11b [Bos taurus]
Length = 752
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|30466260|ref|NP_848668.1| breast cancer type 1 susceptibility protein homolog [Bos taurus]
gi|55976506|sp|Q864U1.1|BRCA1_BOVIN RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|29640734|gb|AAL76094.1| breast and ovarian cancer susceptibility protein [Bos taurus]
Length = 1849
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|296476316|tpg|DAA18431.1| TPA: breast cancer type 1 susceptibility protein homolog [Bos
taurus]
Length = 1849
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|30584759|gb|AAP36632.1| Homo sapiens zinc finger protein 144 (Mel-18) [synthetic construct]
gi|60652807|gb|AAX29098.1| ring finger protein 110 [synthetic construct]
Length = 345
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|426348519|ref|XP_004041881.1| PREDICTED: polycomb group RING finger protein 2 isoform 1 [Gorilla
gorilla gorilla]
gi|426348521|ref|XP_004041882.1| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Gorilla
gorilla gorilla]
Length = 344
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|393225670|gb|EJD33602.1| hypothetical protein AURDEDRAFT_177316 [Auricularia delicata
TFB-10046 SS5]
Length = 258
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
K++D+RK+V+C ICL + K + +C H FC+ C+ ECP CR R
Sbjct: 159 KMADLRKQVECEICLETLWKPWALTDCGHTFCQTCLVSLFDRQKFECPTCRARVTHR 215
>gi|410981213|ref|XP_003996967.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Felis catus]
Length = 765
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + R G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQRKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLNIIHAFE 94
>gi|296201526|ref|XP_002748065.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Callithrix jacchus]
Length = 1857
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|335297605|ref|XP_003358077.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Sus scrofa]
Length = 1865
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|146741282|dbj|BAF62296.1| breast cancer type 1 susceptibility protein homolog [Sus scrofa]
Length = 1863
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 13 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 70
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 71 LQESTRFSQLVEELLKIIHAFE 92
>gi|410981215|ref|XP_003996968.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 3 [Felis catus]
Length = 698
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + R G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQRKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLNIIHAFE 94
>gi|395826556|ref|XP_003786483.1| PREDICTED: polycomb group RING finger protein 2 [Otolemur
garnettii]
Length = 344
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|149723900|ref|XP_001501632.1| PREDICTED: polycomb group RING finger protein 2 [Equus caballus]
Length = 344
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|388454613|ref|NP_001252868.1| polycomb group RING finger protein 2 [Macaca mulatta]
gi|387542154|gb|AFJ71704.1| polycomb group RING finger protein 2 [Macaca mulatta]
Length = 344
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|6005964|ref|NP_009075.1| polycomb group RING finger protein 2 [Homo sapiens]
gi|462585|sp|P35227.1|PCGF2_HUMAN RecName: Full=Polycomb group RING finger protein 2; AltName:
Full=DNA-binding protein Mel-18; AltName: Full=RING
finger protein 110; AltName: Full=Zinc finger protein
144
gi|285933|dbj|BAA03074.1| Mel-18 protein [Homo sapiens]
gi|13436062|gb|AAH04858.1| Polycomb group ring finger 2 [Homo sapiens]
gi|18999362|gb|AAH24255.1| Polycomb group ring finger 2 [Homo sapiens]
gi|119580932|gb|EAW60528.1| polycomb group ring finger 2, isoform CRA_b [Homo sapiens]
gi|119580933|gb|EAW60529.1| polycomb group ring finger 2, isoform CRA_b [Homo sapiens]
Length = 344
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|402899970|ref|XP_003912956.1| PREDICTED: polycomb group RING finger protein 2 isoform 1 [Papio
anubis]
gi|402899972|ref|XP_003912957.1| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Papio
anubis]
gi|402899974|ref|XP_003912958.1| PREDICTED: polycomb group RING finger protein 2 isoform 3 [Papio
anubis]
Length = 344
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|355566817|gb|EHH23196.1| E3 ubiquitin-protein ligase TRIM21 [Macaca mulatta]
gi|355752415|gb|EHH56535.1| E3 ubiquitin-protein ligase TRIM21 [Macaca fascicularis]
Length = 479
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTH 141
+L+ + +EV CPICL + ++ EC H FC+ECI + + G + CP CR H
Sbjct: 6 RLTMMWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKDGGSVCPVCRQH 57
>gi|444713977|gb|ELW54865.1| Polycomb group RING finger protein 2 [Tupaia chinensis]
Length = 318
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 24 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 82
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 83 LLSIRSDKTLQDIVYKLVPGLFKDE 107
>gi|356535179|ref|XP_003536126.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
Length = 450
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRT 140
+ V VK +R + CP+C + T+ CLH FCR+CI + +L + E CP C
Sbjct: 5 QLVKVKRDTLRPCMTCPLCHNFFKDATTISTCLHTFCRKCIYE--KLSDEETDCCPVCNI 62
Query: 141 H--CASRRSLRDDLNYDALIAALYP 163
C LR D N + A ++P
Sbjct: 63 DLGCLPVEKLRPDHNLHDIRAKIFP 87
>gi|355754087|gb|EHH58052.1| DNA-binding protein Mel-18 [Macaca fascicularis]
Length = 344
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|355568454|gb|EHH24735.1| DNA-binding protein Mel-18 [Macaca mulatta]
Length = 341
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|307208978|gb|EFN86178.1| Polycomb group protein Psc [Harpegnathos saltator]
Length = 1598
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
L ++ + CP+C G + TV+ECLH FCR CI K + + CP+C+
Sbjct: 10 LHEVNPHLICPLCRGYLIDATTVVECLHSFCRSCILKHLS-KSAHCPSCK 58
>gi|296201528|ref|XP_002748066.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Callithrix jacchus]
Length = 1880
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|426238121|ref|XP_004013006.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Ovis aries]
Length = 1862
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|344251236|gb|EGW07340.1| Tripartite motif-containing protein 6 [Cricetulus griseus]
Length = 488
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 7/57 (12%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECI----DKAM--RLGNNECPACRT 140
L DIR EV CPICL ++ + ++ +C H FC++CI DK++ + G N CP CRT
Sbjct: 6 LVDIRDEVTCPICLELLTEPLSI-DCGHSFCQDCITGSSDKSVPNQEGKNRCPVCRT 61
>gi|327275580|ref|XP_003222551.1| PREDICTED: polycomb group RING finger protein 2-like [Anolis
carolinensis]
Length = 337
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLE-TNKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|117644306|emb|CAL37647.1| hypothetical protein [synthetic construct]
gi|208967072|dbj|BAG73550.1| polycomb group ring finger 2 [synthetic construct]
Length = 344
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|312096492|ref|XP_003148686.1| hypothetical protein LOAG_13128 [Loa loa]
gi|307756150|gb|EFO15384.1| hypothetical protein LOAG_13128 [Loa loa]
Length = 244
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC---- 138
DE+ I+ L + + CP+C G + TV +CLH FC+ C+ K NN CP C
Sbjct: 10 DEYKIL-LKTLNPHITCPLCKGYFVEATTVTDCLHTFCKSCLLKHFENVNNCCPKCSNLI 68
Query: 139 -RTHCASRRSLRDDLNYDALIAALYPDIDKYEEE 171
++H + S D L+ L P + EEE
Sbjct: 69 HQSHPSHYVSF--DRTMQELVYKLVPGVQIREEE 100
>gi|431838990|gb|ELK00919.1| Putative E3 ubiquitin-protein ligase HECTD2 [Pteropus alecto]
Length = 951
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC--RTH-CASRR 146
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C + H
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 147 SLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|417410052|gb|JAA51507.1| Putative polycomb group ring finger protein 2, partial [Desmodus
rotundus]
Length = 359
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 21 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 79
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 80 LLSIRSDKTLQDIVYKLVPGLFKDE 104
>gi|29647951|gb|AAO92398.1|AF479648_1 breast and ovarian cancer susceptibility protein variant
BRCA1-delta 11 [Bos taurus]
Length = 715
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|403279413|ref|XP_003931245.1| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 34 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 92
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 93 LLSIRSDKTLQDIVYKLVPGLFKDE 117
>gi|307207694|gb|EFN85331.1| Polycomb complex protein BMI-1 [Harpegnathos saltator]
Length = 1474
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
V LS + +++ C +C G T++ECLH FCR CI K + N CP C +
Sbjct: 10 VCLSKLNEQLTCRLCGGYFIDATTIIECLHSFCRSCIVKYLE-NNKYCPICEVQVHKSKP 68
Query: 148 L---RDDLNYDALIAALYP 163
L R D ++ L P
Sbjct: 69 LLNIRPDHTLQDIVYKLVP 87
>gi|402900432|ref|XP_003913179.1| PREDICTED: LOW QUALITY PROTEIN: breast cancer type 1 susceptibility
protein homolog [Papio anubis]
Length = 1873
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
+S ++K ++CPICL +I++ + +C H FCR C+ K + + G ++CP C+ ++RS
Sbjct: 1 MSLMQKILECPICLELIKEPVST-KCDHIFCRFCMLKLLNQKKGPSQCPLCKNDI-TKRS 58
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 59 LQESTRFSQLVEELLKIIHAFQ 80
>gi|170589401|ref|XP_001899462.1| ring finger protein 2 [Brugia malayi]
gi|158593675|gb|EDP32270.1| ring finger protein 2, putative [Brugia malayi]
Length = 541
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 80/187 (42%), Gaps = 16/187 (8%)
Query: 82 KDEFVIVKLS-DIRKEVQC-PICLGI-IRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+ EF I+ + + K C P L + + + + C+HRFC +CI + + G +CP+C
Sbjct: 13 RSEFTILFMFLSLLKNFSCLPQLLEVMVSYSFSFQNCMHRFCADCILQRIHTGARKCPSC 72
Query: 139 RTHCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQT 198
+ L+ D N+DA+I ++ + L+ Q + + ++ I ++
Sbjct: 73 HKVLPKKTPLKSDANFDAIINKMWCLYQAVHIKLLSLQFTLSVERRCVKRPITES----- 127
Query: 199 EALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSSSADE 258
+ +KR S+++R P +E S +N A+G + SA
Sbjct: 128 -SFTKKRVFDKKSSIKRLTSWNTVVPSSS------SEWTPS-KNAKASGKCDSMTDSASN 179
Query: 259 RSTEVRP 265
E++P
Sbjct: 180 IPLEIKP 186
>gi|354502459|ref|XP_003513303.1| PREDICTED: tripartite motif-containing protein 6-like [Cricetulus
griseus]
Length = 690
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 7/57 (12%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECI----DKAM--RLGNNECPACRT 140
L DIR EV CPICL ++ + ++ +C H FC++CI DK++ + G N CP CRT
Sbjct: 208 LVDIRDEVTCPICLELLTEPLSI-DCGHSFCQDCITGSSDKSVPNQEGKNRCPVCRT 263
>gi|296202674|ref|XP_002748549.1| PREDICTED: polycomb group RING finger protein 2 [Callithrix
jacchus]
Length = 344
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|403279411|ref|XP_003931244.1| PREDICTED: polycomb group RING finger protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|291405919|ref|XP_002719174.1| PREDICTED: ring finger protein 110 [Oryctolagus cuniculus]
Length = 314
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLE-TNKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASI 190
S+R D ++ L P + +++E +D AA ++ + SI
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGL--FKDEMKRRRDFYAADDEIVSLSI 109
>gi|1699382|gb|AAB37501.1| Brca1 [Rattus norvegicus]
gi|1773281|gb|AAB40387.1| Brca1 gene product [Rattus norvegicus]
Length = 215
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 8 LHAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRS 65
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L+ + L+ L ID +E
Sbjct: 66 LQGSARFSQLVEELLKIIDAFE 87
>gi|426237855|ref|XP_004012873.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
2 [Ovis aries]
Length = 324
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|402894471|ref|XP_003910381.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21 [Papio anubis]
Length = 468
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+L+ + +EV CPICL + ++ EC H FC+ECI + + G + CP CR H R
Sbjct: 6 RLTMMWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKDGGSVCPVCRQHFLLR 61
>gi|448122095|ref|XP_004204364.1| Piso0_000205 [Millerozyma farinosa CBS 7064]
gi|358349903|emb|CCE73182.1| Piso0_000205 [Millerozyma farinosa CBS 7064]
Length = 481
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDA-- 156
CPIC+ I K +EC HRFC C+ K +CP CR CA ++ D LN D
Sbjct: 389 CPICMSIAFKP-IKLECGHRFCVRCLVKLKHQDKTDCPFCRHQCAVAKA--DSLNLDVKA 445
Query: 157 --LIAALYP 163
L+ +P
Sbjct: 446 MKLMQLYFP 454
>gi|393226463|gb|EJD34217.1| hypothetical protein AURDEDRAFT_176736 [Auricularia delicata
TFB-10046 SS5]
Length = 258
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
K++D+RK+V+C ICL + K + +C H FC+ C+ ECP CR R
Sbjct: 159 KMADLRKQVECEICLETLWKPWALSDCGHTFCQTCLVSLFDRQKFECPTCRARVTHR 215
>gi|395328658|gb|EJF61049.1| hypothetical protein DICSQDRAFT_61475 [Dichomitus squalens LYAD-421
SS1]
Length = 705
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 98 QCPICLGIIRKTRTV--MECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLR 149
+C ICL + M C H F R+C+DK +++G N CPACRT S+ S+R
Sbjct: 647 RCLICLDDYSPEEDLRLMTCKHVFHRDCVDKWLQVGRNNCPACRTKVRSQSSIR 700
>gi|327266646|ref|XP_003218115.1| PREDICTED: zinc finger protein RFP-like [Anolis carolinensis]
Length = 476
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+E+ CPICLG +K ++ C H FC+ C+D+ CP CR
Sbjct: 12 EELACPICLGYFKKPVMIISCGHNFCQSCLDQCWEGKEASCPQCR 56
>gi|384475583|ref|NP_001244974.1| tripartite motif containing 21 [Macaca mulatta]
gi|383421057|gb|AFH33742.1| E3 ubiquitin-protein ligase TRIM21 [Macaca mulatta]
Length = 475
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
+L+ + +EV CPICL + ++ EC H FC+ECI + + G + CP CR H R
Sbjct: 6 RLTMMWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKDGGSVCPVCRQHFLLR 61
>gi|344249173|gb|EGW05277.1| Polycomb group RING finger protein 2 [Cricetulus griseus]
Length = 398
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 36 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 94
Query: 147 --SLRDDLNYDALIAALYPDIDK 167
S+R D ++ L P + K
Sbjct: 95 LLSIRSDKTLQDIVYKLVPGLFK 117
>gi|348508869|ref|XP_003441975.1| PREDICTED: hypothetical protein LOC100708332 [Oreochromis
niloticus]
Length = 1366
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM---RLGNNECPACRTHCASRR 146
+S + + +QCPICL ++ + +C H+FC+ C+ K + + CP C++ ++R
Sbjct: 13 ISALWETLQCPICLDLMTAPVST-KCDHQFCKFCMMKLLDKSKQNKANCPVCKS-TVTKR 70
Query: 147 SLRDDLNYDALIAALYPDIDKYE 169
SL++ + L+A L I YE
Sbjct: 71 SLQESPGFQKLVAGLQDMIQAYE 93
>gi|354474807|ref|XP_003499621.1| PREDICTED: polycomb group RING finger protein 2-like [Cricetulus
griseus]
Length = 342
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|426238123|ref|XP_004013007.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Ovis aries]
Length = 763
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|392566469|gb|EIW59645.1| hypothetical protein TRAVEDRAFT_71634 [Trametes versicolor FP-101664
SS1]
Length = 1103
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 79 DGEKDEFVIVKLSDIRKEVQ-----------CPICLGIIRKTRTV--MECLHRFCRECID 125
D +K + IVK S++ + + C ICL + V M C H F +EC+D
Sbjct: 1018 DIDKSDLQIVKYSELEQYEREGRVSSNCVERCLICLDDYQPEDDVRLMHCRHAFHQECVD 1077
Query: 126 KAMRLGNNECPACRTHCAS 144
K M++G N CPACRT S
Sbjct: 1078 KWMQVGRNNCPACRTKGVS 1096
>gi|355709609|gb|AES03649.1| Polycomb group RING finger protein 2 [Mustela putorius furo]
Length = 344
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|344274771|ref|XP_003409188.1| PREDICTED: polycomb group RING finger protein 6-like isoform 1
[Loxodonta africana]
Length = 346
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 68 GNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA 127
G+ S R D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI +
Sbjct: 99 GHFSLRLEGRPDSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRH 158
Query: 128 MRLGNNECPAC 138
+N CP C
Sbjct: 159 FYY-SNRCPKC 168
>gi|348562775|ref|XP_003467184.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Cavia porcellus]
Length = 1748
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C++ ++RS
Sbjct: 14 LNAMQKVLECPICLELIKEPVST-KCDHIFCKFCMLKFLDQKKGLSQCPLCKSS-ITKRS 71
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 72 LQESTRFGQLVEELQKTIHAFE 93
>gi|221136916|ref|NP_001137578.1| polycomb group RING finger protein 2 [Bos taurus]
gi|296476466|tpg|DAA18581.1| TPA: polycomb group ring finger 2 [Bos taurus]
Length = 344
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|126308194|ref|XP_001366744.1| PREDICTED: polycomb group RING finger protein 2 [Monodelphis
domestica]
Length = 347
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLE-TNKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|348511775|ref|XP_003443419.1| PREDICTED: polycomb group RING finger protein 3-like [Oreochromis
niloticus]
Length = 241
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLCHINAHITCRLCEGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|359483657|ref|XP_002273835.2| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Vitis
vinifera]
Length = 1044
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLR 149
L + +E+ CPICL ++ + + C H FC CI K+M+ G+N CP C+ RR +R
Sbjct: 7 LERMGRELNCPICLSLLN-SAVSLTCNHVFCNSCIMKSMKSGSN-CPVCKVP-YGRREVR 63
Query: 150 DDLNYDALIA 159
+ D+L++
Sbjct: 64 PVPHMDSLVS 73
>gi|335297607|ref|XP_003358078.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Sus scrofa]
Length = 759
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|297266344|ref|XP_001105519.2| PREDICTED: polycomb group RING finger protein 1-like [Macaca
mulatta]
Length = 394
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC 142
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 31 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPMCNIKI 89
Query: 143 ASRR---SLRDDLNYDALIAALYPDIDKYEEEEL 173
+ +L+ D ++ L P + EE+ +
Sbjct: 90 HETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRI 123
>gi|91084985|ref|XP_972531.1| PREDICTED: similar to B lymphoma Mo-MLV insertion region (mouse)
[Tribolium castaneum]
gi|270008538|gb|EFA04986.1| hypothetical protein TcasGA2_TC015065 [Tribolium castaneum]
Length = 328
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSL 148
+++D+ + + C +C G T++ECLH FCR CI K + N CP C + L
Sbjct: 8 QITDLNQHLICKLCKGYFVDATTIIECLHSFCRSCIVKYL-AANKYCPVCDVQVHKSKPL 66
Query: 149 ---RDDLNYDALIAALYP 163
R D ++ L P
Sbjct: 67 LNIRQDRTLQDIVYKLVP 84
>gi|405973239|gb|EKC37963.1| Sedoheptulokinase [Crassostrea gigas]
Length = 1470
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRT 140
K C IC G I+K +T+ +C H FC ECI+K R +CP C T
Sbjct: 897 KTTFCKICHGKIKKAKTLNKCNHTFCTECIEKQFRKFGPKCPQCGT 942
>gi|322794453|gb|EFZ17525.1| hypothetical protein SINV_11876 [Solenopsis invicta]
Length = 1378
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCA--SRRS 147
L D+ + C +C G + TV+ECLH FCR CI K + + CP+C+ H ++ +
Sbjct: 7 LRDVNPHLICLLCRGYLIDATTVVECLHSFCRSCILKYLSTAAH-CPSCK-HAINKAKPN 64
Query: 148 LRDDLNYDALIAALYPDIDKYEEEEL 173
++ D ++ L P + Y +E L
Sbjct: 65 IKADKTLQEIVYKLVPGL--YHKEML 88
>gi|410980897|ref|XP_003996810.1| PREDICTED: polycomb group RING finger protein 2 [Felis catus]
Length = 361
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 24 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 82
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 83 LLSIRSDKTLQDIVYKLVPGLFKDE 107
>gi|440904221|gb|ELR54760.1| Polycomb group RING finger protein 2 [Bos grunniens mutus]
Length = 353
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLE-TNKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|412993404|emb|CCO16937.1| predicted protein [Bathycoccus prasinos]
Length = 139
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLG-NNECPAC 138
+R + C +C I+R+ TV ECLH FC +CI M +G +N CPAC
Sbjct: 26 LRASLTCEMCKNILREANTVTECLHSFCFQCISSKMIVGQSNYCPAC 72
>gi|359320397|ref|XP_548155.4| PREDICTED: polycomb group RING finger protein 2 [Canis lupus
familiaris]
Length = 376
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 39 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 97
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 98 LLSIRSDKTLQDIVYKLVPGLFKDE 122
>gi|395532615|ref|XP_003768365.1| PREDICTED: polycomb group RING finger protein 2 [Sarcophilus
harrisii]
Length = 289
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 21 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLE-TNKYCPMCDVQVHKTRP 79
Query: 147 --SLRDDLNYDALIAALYPDIDK 167
S+R D ++ L P + K
Sbjct: 80 LLSIRSDKTLQDIVYKLVPGLFK 102
>gi|441660761|ref|XP_004093035.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
2 [Nomascus leucogenys]
Length = 286
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLE-TNKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|440795518|gb|ELR16638.1| zinc finger, C3HC4 type (RING finger) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 914
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 75 RSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE 134
R S G D + ++S +RK ++CP+C ++ T + C H FC C+ ++L N +
Sbjct: 828 RLSARGSVDTLLEEEVSTLRKMLRCPVCNDNMKDT-VITRCFHVFCNPCVKSRLQLRNRK 886
Query: 135 CPAC 138
CP C
Sbjct: 887 CPGC 890
>gi|260826672|ref|XP_002608289.1| hypothetical protein BRAFLDRAFT_87969 [Branchiostoma floridae]
gi|229293640|gb|EEN64299.1| hypothetical protein BRAFLDRAFT_87969 [Branchiostoma floridae]
Length = 1122
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 92 DIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDD 151
+I ++ +CP+CLG + RT + C H FC CID +++ ECP C+ +RR + D
Sbjct: 989 EIEEDEKCPVCLGRVGDPRT-LACRHTFCSSCIDMSIK-SKPECPVCKMPLGNRRGNQPD 1046
>gi|91805865|gb|ABE65661.1| hypothetical protein At1g28327 [Arabidopsis thaliana]
Length = 239
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 100/244 (40%), Gaps = 48/244 (19%)
Query: 184 KQIQASIAQTFQRQTEALGRKRTPKSTSALRRSHGR--YRDTPLRGRRNYRMTELQGSDE 241
KQ QAS QT +RQ + KR + R G+ +R P +G R R + D+
Sbjct: 7 KQGQASYMQTLKRQAKVDSGKRMSTNFVIRRDPTGQCIFRPIPFKGMRKVR----KHVDD 62
Query: 242 NDDANGDAGK--------------DSSSADERSTEVRPKRRKRWYGARFSQSSSAAAGTD 287
++ +G + K S E T +R + + R F G +
Sbjct: 63 DEGWSGGSKKVKVRGLTSSSGDGDSLSYPFENETTIRNREKDRLMLEIF--------GPE 114
Query: 288 GGGDENDSEVHRESMGASV-GLIGPSERLAWGKGGIRSHTRHGS-----VSGSNGKNARN 341
D ++S E M ++ L+ L WGK G RS R G+ + G++
Sbjct: 115 STDDSDESGTEEEFMETNLMSLVS----LQWGKRGKRS-MRKGTWKRHILENHVGQHKNT 169
Query: 342 NRLSKLVDYLQSLEEKDD---------QLDMHLVLVSLDEQRIPGLQQPYLCCRPTLSVR 392
K Y ++L Q+D+ ++LVS+D IP LQ P + C+P ++++
Sbjct: 170 QDEVKNCLYCETLVHSFSILIGVVSMMQMDIQVLLVSMDASVIPNLQNPQVSCKPNVTLK 229
Query: 393 HLCQ 396
LC+
Sbjct: 230 SLCE 233
>gi|340369220|ref|XP_003383146.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Amphimedon queenslandica]
Length = 150
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 69 NESDRSRSSGDG-EKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA 127
+E +GD +K + + L IR+ +QCPICL + K + +CLH+FCRECI
Sbjct: 2 DEDQEETPAGDSFDKTDAIRETLRSIRQTLQCPICLEQL-KNPCLTQCLHQFCRECIQTV 60
Query: 128 MRLGN----NECPACRTHCASRRSLRDDLNYDALIAAL 161
+ +CP C+ +R L D + +I+A+
Sbjct: 61 ISTTTAANKPKCPLCKEQ-ICKRGLTDSSRMEEVISAM 97
>gi|383857691|ref|XP_003704337.1| PREDICTED: uncharacterized protein LOC100877658 [Megachile
rotundata]
Length = 1539
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE--CPACR 139
L ++ + CP+C G + TV+ECLH FCR CI K + N E CP+C+
Sbjct: 10 LREVNPYLICPLCRGYLIDATTVVECLHSFCRSCILKHL---NTEAHCPSCK 58
>gi|344274773|ref|XP_003409189.1| PREDICTED: polycomb group RING finger protein 6-like isoform 2
[Loxodonta africana]
Length = 271
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 68 GNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA 127
G+ S R D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI +
Sbjct: 99 GHFSLRLEGRPDSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRH 158
Query: 128 MRLGNNECPAC 138
+N CP C
Sbjct: 159 FYY-SNRCPKC 168
>gi|452824146|gb|EME31151.1| hypothetical protein Gasu_16460 [Galdieria sulphuraria]
Length = 475
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 96 EVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYD 155
E CPICL ++ K + C HRFC +CI +A+ L + CP CR +S L + +
Sbjct: 355 EYHCPICLSLLYKP-MALPCGHRFCGKCISRAI-LLDFHCPVCRHDYSSGVRLERKKSLE 412
Query: 156 ALIAALYPDIDKYEEEELAFQDEE 179
+ +PD + +EE+ QDE+
Sbjct: 413 RFLRESFPDAWQKRKEEV-LQDEK 435
>gi|6678635|ref|NP_033571.1| polycomb group RING finger protein 2 [Mus musculus]
gi|254028181|ref|NP_001156779.1| polycomb group RING finger protein 2 [Mus musculus]
gi|254028183|ref|NP_001156780.1| polycomb group RING finger protein 2 [Mus musculus]
gi|126937|sp|P23798.2|PCGF2_MOUSE RecName: Full=Polycomb group RING finger protein 2; AltName:
Full=DNA-binding protein Mel-18; AltName: Full=Melanoma
nuclear protein 18; AltName: Full=RING finger protein
110; AltName: Full=Zinc finger protein 144;
Short=Zfp-144
gi|220477|dbj|BAA14122.1| Mel-18 [Mus musculus]
gi|16741134|gb|AAH16419.1| Pcgf2 protein [Mus musculus]
gi|19548758|gb|AAL90776.1| mel-18 protein [Mus musculus]
gi|19548760|gb|AAL90777.1| mel-18 protein [Mus musculus]
gi|148684140|gb|EDL16087.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
gi|148684141|gb|EDL16088.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
gi|148684142|gb|EDL16089.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
gi|148684143|gb|EDL16090.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
Length = 342
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|356533743|ref|XP_003535419.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
Length = 436
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECIDKAM---RLGNNECPACR--THCASRRSLRDD 151
V CP+C R T+ EC H FCREC+DK + +L + CP C C+ LR D
Sbjct: 31 VTCPLCNKFFRNATTISECCHSFCRECVDKKLIDEKLKH--CPICNRDLGCSPHDKLRPD 88
Query: 152 LNYDALIAALYP 163
L ++P
Sbjct: 89 PCLQDLRDKIFP 100
>gi|410895639|ref|XP_003961307.1| PREDICTED: uncharacterized protein LOC101064828 [Takifugu rubripes]
Length = 1279
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM---RLGNNECPACRTHCASRR 146
+S + + +QCPICL I+ + +C H+FC+ CI K + + CP C++ ++R
Sbjct: 13 ISVLWESLQCPICLDILTAPVST-KCDHQFCKFCISKLLSNTKQNKANCPVCKSK-ITKR 70
Query: 147 SLRDDLNYDALIAALYPDIDKYE 169
SL++ + L+ L I YE
Sbjct: 71 SLQESPGFQRLVTGLQGMILAYE 93
>gi|42561762|ref|NP_172162.3| E3 ubiquitin protein ligase DRIP1 [Arabidopsis thaliana]
gi|302595925|sp|Q9M9Y4.2|DRIP1_ARATH RecName: Full=E3 ubiquitin protein ligase DRIP1; AltName:
Full=DREB2A-interacting protein 1
gi|332189912|gb|AEE28033.1| E3 ubiquitin protein ligase DRIP1 [Arabidopsis thaliana]
Length = 421
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE-CPACRTHCA 143
+ VK +R + C IC I+R T+ ECLH FCR+CI + + E CP C
Sbjct: 2 MIKVKKETMRACLSCSICDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLG 61
Query: 144 SR--RSLRDDLNYDALIAALY 162
S LR D N L A ++
Sbjct: 62 STPLEKLRPDHNLQDLRAKIF 82
>gi|157786680|ref|NP_001099306.1| polycomb group RING finger protein 2 [Rattus norvegicus]
gi|149054053|gb|EDM05870.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149054054|gb|EDM05871.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149054055|gb|EDM05872.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149054056|gb|EDM05873.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|187469317|gb|AAI67059.1| Pcgf2 protein [Rattus norvegicus]
Length = 342
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|348688912|gb|EGZ28726.1| hypothetical protein PHYSODRAFT_322360 [Phytophthora sojae]
Length = 811
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 76 SSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNEC 135
+S GE + +L D++K V C +C RK + +C H FC+ECI+ ++ N +C
Sbjct: 735 ASSTGELTDLERFELRDLQKLVNCSVCQDR-RKDVIISKCFHMFCKECIENNLKSRNRKC 793
Query: 136 PACR 139
P C+
Sbjct: 794 PTCK 797
>gi|165972361|ref|NP_001107055.1| uncharacterized protein LOC557841 [Danio rerio]
gi|159155816|gb|AAI54623.1| Zgc:172266 protein [Danio rerio]
Length = 447
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLG-NNECPACRTHCASRRSLRDD 151
KE+ CPIC I K+ ++ C H FC+ECI + R + ECP CR RRS +DD
Sbjct: 7 KEISCPICCEIF-KSPILLSCSHSFCKECIQQFWRTKISRECPVCR-----RRSSKDD 58
>gi|66364871|gb|AAH95926.1| LOC733241 protein [Xenopus laevis]
Length = 344
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E QCPICLG I+ +T+ +C H FC +CI +A+++ CP C
Sbjct: 157 RENQCPICLGEIQNIKTLEKCQHSFCEDCITRALQV-KKACPMC 199
>gi|328713971|ref|XP_001946307.2| PREDICTED: hypothetical protein LOC100161947 [Acyrthosiphon pisum]
Length = 608
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSL 148
K++D+ + C +C G TV+ECLH FCR CI K + N CP C + L
Sbjct: 7 KVTDLNPHLLCVLCGGYFVDATTVIECLHSFCRSCIVKYLE-RNKYCPICDVLVHKSKPL 65
Query: 149 ---RDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
R D ++ L P + ++E+ + + RNK
Sbjct: 66 SNIRPDHTLQNIVYKLVPHL---FQKEMVMRRDFYNRNK 101
>gi|194754545|ref|XP_001959555.1| GF11991 [Drosophila ananassae]
gi|190620853|gb|EDV36377.1| GF11991 [Drosophila ananassae]
Length = 1606
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC-ASRR 146
V L+ + + C +C G + T++ECLH FC C+ +R CP C+ +++
Sbjct: 234 VLLTAVNPHIICHLCTGYLVDATTIVECLHSFCHSCLINHLR-KERFCPRCKMVINSAKP 292
Query: 147 SLRDDLNYDALIAALYPDIDKYEEE 171
+++ D A++ L P + YE E
Sbjct: 293 NIKSDTTLQAIVYKLVPGL--YERE 315
>gi|383421039|gb|AFH33733.1| breast cancer type 1 susceptibility protein isoform 1 [Macaca
mulatta]
Length = 1863
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FCR C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCRFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIIHAFQ 94
>gi|355754208|gb|EHH58173.1| hypothetical protein EGM_07963 [Macaca fascicularis]
Length = 1863
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FCR C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCRFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIIHAFQ 94
>gi|15078834|ref|NP_149584.1| 121R [Invertebrate iridescent virus 6]
gi|82046829|sp|O55735.1|121R_IIV6 RecName: Full=Putative RING finger protein 121R
gi|2738419|gb|AAB94446.1| 121R [Invertebrate iridescent virus 6]
Length = 89
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 7/52 (13%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+++ +++K V CPICL I K TV+EC H C C+ K N CP CR
Sbjct: 34 IEIENVKKNVLCPICL--IAKVNTVLECTHVLCSNCVKKI-----NVCPICR 78
>gi|169234602|ref|NP_001108421.1| breast cancer type 1 susceptibility protein homolog [Macaca
mulatta]
gi|55976415|sp|Q6J6I9.1|BRCA1_MACMU RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|48479018|gb|AAT44833.1| breast cancer type 1 [Macaca mulatta]
Length = 1863
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FCR C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCRFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIIHAFQ 94
>gi|242009130|ref|XP_002425345.1| polycomb complex protein bmi-1, putative [Pediculus humanus
corporis]
gi|212509130|gb|EEB12607.1| polycomb complex protein bmi-1, putative [Pediculus humanus
corporis]
Length = 886
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+KL D+ + C +C G T++ECLH FCR CI K + + CP C +
Sbjct: 10 LKLLDLNPHLMCVLCGGYYIDATTIVECLHSFCRSCIVKHLE-SSKYCPICEVQVHKTKP 68
Query: 148 L---RDDLNYDALIAALYPDI 165
L R D ++ L P +
Sbjct: 69 LLNIRPDKTLQNIVYKLVPGL 89
>gi|395861829|ref|XP_003803177.1| PREDICTED: tripartite motif-containing protein 60-like [Otolemur
garnettii]
Length = 484
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMR--LGNNECPACRTH 141
EFV V L+D++ E CPICL + T+ C H FC CI + + G+ CP+CR
Sbjct: 13 EFVTV-LADLQAEASCPICLDYLTDPVTIC-CGHNFCHSCISMSWKDLEGSFPCPSCRFC 70
Query: 142 CASRRSLRD 150
C R+ + +
Sbjct: 71 CPERKFISN 79
>gi|198426367|ref|XP_002131146.1| PREDICTED: similar to ring finger protein isoform 1 [Ciona
intestinalis]
Length = 243
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRT---HCAS 144
++L ++ + + C +C G + T+ ECLH FC+ CI + G NECP C H
Sbjct: 22 IRLRNLNEHITCYLCHGYLIDATTITECLHTFCKSCIVSHVEDGRNECPKCEAVIHHSYP 81
Query: 145 RRSLRDDLNYDALIAALYPDIDKYE 169
+ L D ++ L P + + E
Sbjct: 82 LQYLAYDRTMQDIVEKLVPKLKQSE 106
>gi|198421270|ref|XP_002123641.1| PREDICTED: similar to breast cancer 1, early onset, partial [Ciona
intestinalis]
Length = 807
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 6/154 (3%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTV-MECLHRFCRECIDKAM-RLGNNECPACRT 140
D V+ L ++K V+C ICL + T V +C H FC CI KAM + +CP C+T
Sbjct: 2 DNSVLHCLQQLQKVVECSICLETM--TNPVQTKCNHSFCSHCIHKAMAERPSFKCPLCKT 59
Query: 141 HCASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEA 200
S+RSL+ +I+ L ++K +E+ + ++ + + + +
Sbjct: 60 -AISKRSLKKSSYLTEVISTLT-TLNKSAHKEMHVEGFTEPKSTEKELGVLKKGNNSRNM 117
Query: 201 LGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMT 234
L + TP+ H + D L R ++T
Sbjct: 118 LKKSATPEQPPGFAEEHSQVEDMNLIPRTEDQLT 151
>gi|12275862|gb|AAG50166.1|AF230387_1 tripartite motif protein TRIM31 beta [Homo sapiens]
Length = 267
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA--MRLGNNECPACRTHCASRRS 147
++ +++EV CPICL I++K T+ +C H FC +CI + G +CP C+T S R
Sbjct: 7 VNKLQEEVICPICLDILQKPVTI-DCGHNFCPQCITQIGETSCGFFKCPLCKT---SVR- 61
Query: 148 LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAA 181
RD + +++L+ L I + E+ + +EA
Sbjct: 62 -RDAIRFNSLLRNLVEKIQALQASEVQSKRKEAT 94
>gi|354484980|ref|XP_003504663.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Cricetulus griseus]
Length = 1805
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LHAMQKILECPICLELIKEPIST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L+ + L+ L D +E
Sbjct: 73 LQGSTRFSQLVEELLKITDAFE 94
>gi|356576708|ref|XP_003556472.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
Length = 433
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRT 140
+ V VK +R + CP+C + T+ CLH FCR+CI + +L + E CP C
Sbjct: 6 QVVKVKRDTLRPCMTCPLCHKFFKDATTISLCLHTFCRKCIYE--KLSDEEMDCCPVCHI 63
Query: 141 H--CASRRSLRDDLNYDALIAALYP 163
C LR D N + A ++P
Sbjct: 64 DLGCLPVEKLRPDHNLHDIRAKIFP 88
>gi|340375861|ref|XP_003386452.1| PREDICTED: polycomb group RING finger protein 1-like [Amphimedon
queenslandica]
Length = 238
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRT 140
+ DI + + C +C G + T++ECLH FC+ CI K ++ N CP C T
Sbjct: 2 VKDINQHITCSLCAGYLIDATTIIECLHTFCKTCIVKYLQ-NCNSCPVCNT 51
>gi|344251973|gb|EGW08077.1| Breast cancer type 1 susceptibility protein-like [Cricetulus
griseus]
Length = 1790
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LHAMQKILECPICLELIKEPIST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L+ + L+ L D +E
Sbjct: 73 LQGSTRFSQLVEELLKITDAFE 94
>gi|314905038|gb|ADT61634.1| recombination activating protein 1, partial [Goniurosaurus araneus]
Length = 346
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR---RS 147
+D K + C IC I+ C H FCR CI K +++ + CPACR C
Sbjct: 244 ADFVKSISCQICEHILADP-VETTCKHLFCRLCILKCLKVIGSYCPACRYPCFPTDLVNP 302
Query: 148 LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQ 185
+R LN + +A P D YEE L + + +KQ
Sbjct: 303 VRSFLNILSTLAVRCPVKDCYEEVSLGKYNHHLSSHKQ 340
>gi|413933115|gb|AFW67666.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 457
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE-CPACRTH--CASRRSLRDDLN 153
+ CP+C G++R+ V CLH FCR+CI + + + + CP C C LR D N
Sbjct: 19 MTCPLCRGLLREATAVALCLHTFCRDCIVEKINDDDADCCPVCNIDLGCDPEEKLRPDHN 78
Query: 154 YDALIAALYPDIDKYEEEELAFQDEEAARNKQ--IQASIAQTFQRQTEALGRKRTPKSTS 211
+ ++P I K + A+ KQ + + + T + + G T K T
Sbjct: 79 LQDIRNKVFP-IKKINADSPKSLTTLPAKRKQRSLSSLVVDTPRSVVKRTG--LTGKRTK 135
Query: 212 ALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSSSADERSTEVRPKRRKRW 271
A R++ +P+ T+ + D+ D + + + ++ TE + ++ R
Sbjct: 136 AKRKTVASSAASPINNGTMQLPTKFENRDQKTDKSCASQSTNVASAANKTENQDLKKTRK 195
Query: 272 YGARFSQSSSAAAGTDGGGDENDSEV 297
A+ QS+ AA + D +V
Sbjct: 196 TSAK--QSTRAATSANRKQQNTDVDV 219
>gi|338711847|ref|XP_001492115.3| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Equus caballus]
Length = 1856
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLRIIHAFE 94
>gi|380028079|ref|XP_003697739.1| PREDICTED: uncharacterized protein LOC100867025 [Apis florea]
Length = 1744
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCA-SRRSL 148
+ +++K +QC ICL II C HRFCR CI ++ N CP C +CA RRS+
Sbjct: 15 IKNMQKCLQCTICLQIISDP-VKTHCGHRFCRICIQPVIQNKNALCPLC--NCAIQRRSI 71
Query: 149 RDDLNYDALIAALYPDID 166
D N I L ID
Sbjct: 72 SKDENTAIYIKKLQNIID 89
>gi|302760615|ref|XP_002963730.1| hypothetical protein SELMODRAFT_438486 [Selaginella moellendorffii]
gi|300168998|gb|EFJ35601.1| hypothetical protein SELMODRAFT_438486 [Selaginella moellendorffii]
Length = 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRT 140
E V V + + + CP+C ++ + T+ ECLH FCRECI ++L ++ CP C
Sbjct: 2 EVVKVARAPLVACLTCPLCSSLLDEATTICECLHSFCRECIH--LKLSEDDTQSCPICDV 59
Query: 141 H--CASRRSLRDDLNYDALIAALY 162
+ A LR D D L L+
Sbjct: 60 YLGVAPLEKLRPDPQLDELRNKLF 83
>gi|317419423|emb|CBN81460.1| Breast cancer type 1 susceptibility protein homolog [Dicentrarchus
labrax]
Length = 1418
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN------ECPACRTHCA 143
+S + + +QCPICL ++ + +C H+FC+ C+ M+L +N CP C+
Sbjct: 13 ISVLWETLQCPICLDLMTAPVST-KCDHQFCKFCM---MKLLDNTKQNRANCPVCKAKI- 67
Query: 144 SRRSLRDDLNYDALIAALYPDIDKYE 169
++RSL++ + L+A L I YE
Sbjct: 68 TKRSLQESPGFQRLVAGLQDMIQAYE 93
>gi|332027981|gb|EGI68032.1| Polycomb complex protein BMI-1 [Acromyrmex echinatior]
Length = 1426
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
V L+ + + + C +C G T++ECLH FC+ CI K + N CP C R
Sbjct: 10 VCLTRLNEHLTCKLCGGYFIDATTIIECLHSFCKSCIVKYLE-NNKYCPICEVQVHKSRP 68
Query: 148 L---RDDLNYDALIAALYP 163
L R D ++ L P
Sbjct: 69 LLNIRPDYILQDIVYKLVP 87
>gi|183986701|ref|NP_001116939.1| deltex homolog 3 [Xenopus (Silurana) tropicalis]
gi|170284624|gb|AAI61216.1| dtx3 protein [Xenopus (Silurana) tropicalis]
Length = 353
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E QCPICLG I+ +T+ +C H FC +CI +A+++ CP C
Sbjct: 166 RENQCPICLGEIQNIKTLEKCQHSFCEDCITRALQV-KKACPMC 208
>gi|167560893|ref|NP_001107963.1| breast cancer 1, early onset [Xenopus (Silurana) tropicalis]
gi|166796759|gb|AAI59160.1| brca1 protein [Xenopus (Silurana) tropicalis]
Length = 1592
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM---RLGNNECPACRTHCASRR 146
+S ++K ++CPICL ++++ +C H FC+ C+ + + + N CP C+T +RR
Sbjct: 10 ISVMQKNLECPICLELMKEP-VATKCDHIFCKFCMLQLLSKKKKENVPCPLCKTE-VTRR 67
Query: 147 SLRDDLNYDALIAALYPDIDKYE 169
SL++ + L+ L I +E
Sbjct: 68 SLQESHRFKLLVEGLLKIIKAFE 90
>gi|256077316|ref|XP_002574952.1| ring finger protein 151 [Schistosoma mansoni]
gi|353233298|emb|CCD80653.1| putative ring finger protein 151 [Schistosoma mansoni]
Length = 204
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 14/95 (14%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDL 152
I++ C IC ++ TR ++ C H+FCREC+ ++ N CP C R +
Sbjct: 66 IKQTFLCSICHNLLVNTRLLL-CGHQFCRECLYYWFKIS-NTCPLC----------RKSI 113
Query: 153 NYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQ 187
NY +I+A+ +ID + +E + + +N++IQ
Sbjct: 114 NYHYIISAI--NIDNFLDELINNGCNDLLKNQRIQ 146
>gi|357115770|ref|XP_003559659.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Brachypodium
distachyon]
Length = 502
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 85 FVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE----CPACRT 140
V+V+ + + + CP+C ++R T+ ECLH FCR CI + N+E CP C+
Sbjct: 86 VVMVRRELLARCMTCPLCNRLLRDATTISECLHTFCRRCIYQKF---NDEEVESCPVCKI 142
Query: 141 H--CASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQT 198
C LR D + + + ++P + K+I+A T
Sbjct: 143 DLGCTPVEKLRADHSLHDVRSKIFP-----------------FKRKKIKAEDVAT----P 181
Query: 199 EALGRKRTPKSTSALRRSHGRYRDTPLRGRRNYRMT 234
+L KR +S S+L + T L GRR +T
Sbjct: 182 ISLPSKRKERSISSLVVPTPKLAPTGLTGRRTRAVT 217
>gi|348529700|ref|XP_003452351.1| PREDICTED: polycomb group RING finger protein 6-like [Oreochromis
niloticus]
Length = 256
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 74 SRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN 133
S ++ D + ++ + L+ ++C +C G + T+ ECLH FC+ CI K +N
Sbjct: 14 SGNASDSDSEDEPTLPLNQFYPYIRCALCCGFLIDATTITECLHTFCKSCIVKHF-FYSN 72
Query: 134 ECPACRTHCASRRSL---RDDLNYDALIAALYPDIDKYEEEELA 174
+CP C + L R D ++ + P +++ E E++
Sbjct: 73 KCPTCSIIVHQTQPLYNIRPDRQLQDIVYKMVPFLEELEREQMC 116
>gi|395826993|ref|XP_003786695.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Otolemur garnettii]
Length = 1803
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|350644706|emb|CCD60584.1| RING finger protein, putative [Schistosoma mansoni]
Length = 122
Score = 50.4 bits (119), Expect = 0.002, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC---- 138
DE ++LSD+ + + C +C G + ++ ECLH FC+ CI K ECP C
Sbjct: 6 DELPAIQLSDLNEFITCKLCKGYLIDAVSITECLHPFCKSCIVKYSE-EKRECPVCGILI 64
Query: 139 -RTHCASRRSLRDDLNYDALIAALYPDIDKYEEE 171
++H + S D ++ + PD+ + E +
Sbjct: 65 HQSHPLNYMSF--DRTLQDIVYKIVPDLKQKERQ 96
>gi|192455614|ref|NP_001122184.1| polycomb group RING finger protein 5-A [Danio rerio]
gi|306755928|sp|B3DK16.1|PCF5A_DANRE RecName: Full=Polycomb group RING finger protein 5-A
gi|190338518|gb|AAI63687.1| Zgc:194668 [Danio rerio]
gi|190338958|gb|AAI63702.1| Zgc:194668 [Danio rerio]
Length = 234
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 92 DIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR---RSL 148
D + + C IC G + K V ECLH FC+ CI + +NECP C L
Sbjct: 11 DFNRYITCSICRGYLIKPTAVTECLHTFCKSCIVQHFE-ESNECPECGIQVHETNPLEML 69
Query: 149 RDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQAS 189
R D + +I L P + + EE Q+ E R +I+++
Sbjct: 70 RLDKTLEEIIFKLVPGLREKEEH----QESEFWRKHKIKSN 106
>gi|67593286|ref|XP_665709.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656518|gb|EAL35482.1| hypothetical protein Chro.10374, partial [Cryptosporidium hominis]
Length = 278
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
CPIC G R T+ ECLH FC+ CI + + ECP C
Sbjct: 47 CPICEGFFRGATTIRECLHTFCKACIIEHIESKGAECPKC 86
>gi|212723178|ref|NP_001131749.1| uncharacterized LOC100193116 [Zea mays]
gi|194692422|gb|ACF80295.1| unknown [Zea mays]
gi|414883780|tpg|DAA59794.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 300
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 49 LEEQQPPQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRK 108
L+ QPP+ AAAA R G G +V+ S + V C IC G++R
Sbjct: 24 LQSDQPPR----AAAA----------REGGRGGTGPESLVRGSVVAPCVSCGICGGLLRD 69
Query: 109 TRTVMECLHRFCRECI-DKAMRLGNNECPACRTHCASR-RSLRDDLNYDALIAALYP 163
ECLH FCR+CI DK + CP C + LR D + + + ++P
Sbjct: 70 ATAFTECLHAFCRKCIYDKVAKDNIKCCPKCGIFMGNPLEKLRPDHSLEHIRPLIFP 126
>gi|338711849|ref|XP_001492138.3| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Equus caballus]
Length = 755
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
L+ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLRIIHAFE 94
>gi|195120011|ref|XP_002004522.1| GI19979 [Drosophila mojavensis]
gi|193909590|gb|EDW08457.1| GI19979 [Drosophila mojavensis]
Length = 1449
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCA---SR 145
+LS ++ C IC G + TV C H +CR CI K + L + CP C++ S
Sbjct: 21 QLSQFNEQFTCHICRGYMIDPTTVDNCYHTYCRSCILKHL-LRDVYCPQCKSSGGKHISE 79
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEELA-FQDE 178
+LR D ALI L P + + E E LA F+++
Sbjct: 80 DNLRSDDTLRALIYKLVPGLYQRECERLAEFKEQ 113
>gi|66362364|ref|XP_628146.1| ring domain protein [Cryptosporidium parvum Iowa II]
gi|46227384|gb|EAK88319.1| ring domain protein [Cryptosporidium parvum Iowa II]
Length = 284
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
CPIC G R T+ ECLH FC+ CI + + ECP C
Sbjct: 47 CPICEGFFRGATTIRECLHTFCKACIIEHIESKGAECPKC 86
>gi|84996901|ref|XP_953172.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304168|emb|CAI76547.1| hypothetical protein, conserved [Theileria annulata]
Length = 359
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 61/155 (39%), Gaps = 21/155 (13%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDL 152
+ K+ +CPIC I+ K T C H FC+ CID+A+ N CP CR ++ S
Sbjct: 3 VPKDFECPICFNILYKPVTT-SCGHNFCKFCIDQAIDSSPN-CPLCRVPLTTQYS----- 55
Query: 153 NYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRKRTPKSTSA 212
P+I + FQDE R + S + F L + + S S+
Sbjct: 56 ----------PNILLTQLINERFQDEIKERMNS-RISFTEGFFNIKIILLVQNSLHS-SS 103
Query: 213 LRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANG 247
+ RY PL RR Y G D N
Sbjct: 104 IYNPDLRY--LPLYYRRFYHPPVFVGEDVTISINN 136
>gi|391336808|ref|XP_003742770.1| PREDICTED: polycomb group RING finger protein 3-like [Metaseiulus
occidentalis]
Length = 250
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 16/91 (17%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRT------- 140
+KL + + C IC G + TV ECLH FC+ C+ K + N CP C T
Sbjct: 5 IKLKTLNVHITCRICKGYLIDATTVTECLHTFCKSCLVKHLE-EKNTCPQCETLIHQSHP 63
Query: 141 --HCASRRSLRDDLNYDALIAALYPDIDKYE 169
+ A R+++D ++ L PD+ K E
Sbjct: 64 LNYVAYDRTMQD------VVYRLVPDLQKKE 88
>gi|157423392|gb|AAI53806.1| LOC100126653 protein [Xenopus laevis]
Length = 278
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E QCPICLG I+ +T+ +C H FC +CI +A+++ CP C
Sbjct: 91 RENQCPICLGEIQNIKTLEKCQHSFCEDCITRALQV-KKACPMC 133
>gi|392355796|ref|XP_003752135.1| PREDICTED: polycomb group RING finger protein 6-like [Rattus
norvegicus]
Length = 209
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 67 DGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDK 126
DG+E +G +E V LS + + C IC G + + ECLH FC+ CI K
Sbjct: 68 DGSEFRHPNPEREGSDEEKHFVPLSQLAPFISCSICKGYLIDATAITECLHTFCKSCIVK 127
Query: 127 AMRLGNNECPAC 138
+N CP C
Sbjct: 128 HFE-HSNRCPKC 138
>gi|307107127|gb|EFN55371.1| hypothetical protein CHLNCDRAFT_134421 [Chlorella variabilis]
Length = 976
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLR 149
+ +E+ C ICL ++ + C H FC CI +++R +CP C+ RR +
Sbjct: 5 FETLARELSCSICLCVMSPPVARLPCCHYFCMGCIQQSVRH-KAQCPVCKCK-VGRRDIS 62
Query: 150 DDLNYDALIAALYPDIDKYEEE 171
D D ++ A + D+D ++EE
Sbjct: 63 SDDTMDRVVLA-FADLDAHKEE 83
>gi|198426369|ref|XP_002131159.1| PREDICTED: similar to ring finger protein isoform 2 [Ciona
intestinalis]
Length = 226
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRT---HCAS 144
++L ++ + + C +C G + T+ ECLH FC+ CI + G NECP C H
Sbjct: 5 IRLRNLNEHITCYLCHGYLIDATTITECLHTFCKSCIVSHVEDGRNECPKCEAVIHHSYP 64
Query: 145 RRSLRDDLNYDALIAALYPDIDKYE 169
+ L D ++ L P + + E
Sbjct: 65 LQYLAYDRTMQDIVEKLVPKLKQSE 89
>gi|256075664|ref|XP_002574137.1| serine/threonine protein kinase [Schistosoma mansoni]
Length = 1767
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
DEF++ ++ D ++++ CP C I RK + +C H FC C+ N +CP C
Sbjct: 1698 DEFLLAEIQDYKEQLTCPTC-KINRKDAILTKCFHVFCLNCLKVRYETRNRKCPKC 1752
>gi|66822167|ref|XP_644438.1| hypothetical protein DDB_G0273643 [Dictyostelium discoideum AX4]
gi|66822915|ref|XP_644812.1| hypothetical protein DDB_G0273381 [Dictyostelium discoideum AX4]
gi|60472561|gb|EAL70512.1| hypothetical protein DDB_G0273643 [Dictyostelium discoideum AX4]
gi|60472959|gb|EAL70908.1| hypothetical protein DDB_G0273381 [Dictyostelium discoideum AX4]
Length = 1364
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDL 152
I+ ++C ICL + R C FC ECID+ + + N CPACR S D+L
Sbjct: 24 IQDIIKCSICLNSPKNPRFCPRCSALFCLECIDRWI-ISNPTCPACRDTLTS-----DNL 77
Query: 153 NYDALIAALYPDIDKYEEEELAFQD 177
N + +++ + ++ K E+EE D
Sbjct: 78 NSNLIVSNILNELVKSEQEEYTSSD 102
>gi|224131246|ref|XP_002328491.1| predicted protein [Populus trichocarpa]
gi|222838206|gb|EEE76571.1| predicted protein [Populus trichocarpa]
Length = 406
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRT 140
+ V VK + + CP+C ++++ T+ CLH FCR+CI + +L + E CP C
Sbjct: 4 QIVKVKREILEACMTCPLCNKLLKEATTIFSCLHTFCRKCIYE--KLSDEEVDCCPVCNM 61
Query: 141 H--CASRRSLRDDLNYDALIAALYP 163
+ C LR D N + A ++P
Sbjct: 62 NLGCLPVDKLRADHNLQDIRAKIFP 86
>gi|157114431|ref|XP_001652268.1| ring finger protein [Aedes aegypti]
gi|108877312|gb|EAT41537.1| AAEL006839-PA [Aedes aegypti]
Length = 194
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL + K + C IC G TV ECLH FC+ C+ K + NN CP C+
Sbjct: 5 IKLKTLNKHITCEICKGYFIDATTVTECLHTFCKSCLVKHLE-ENNTCPTCQ 55
>gi|360043439|emb|CCD78852.1| putative e3 ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)
[Schistosoma mansoni]
Length = 1762
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
DEF++ ++ D ++++ CP C I RK + +C H FC C+ N +CP C
Sbjct: 1693 DEFLLAEIQDYKEQLTCPTC-KINRKDAILTKCFHVFCLNCLKVRYETRNRKCPKC 1747
>gi|357133046|ref|XP_003568139.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog
[Brachypodium distachyon]
Length = 993
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLR 149
L + +E++CPICL ++R +V C H FC +C+ ++M+ ++ CP C+ RR +R
Sbjct: 7 LEKMGRELKCPICLSLLRSAVSVT-CNHIFCNDCLTESMKSASS-CPVCKVP-FRRREIR 63
Query: 150 DDLNYDALIAAL 161
+ D L++ L
Sbjct: 64 PAPHMDNLVSIL 75
>gi|226532512|ref|NP_001151476.1| LOC100285109 [Zea mays]
gi|195647044|gb|ACG42990.1| protein binding protein [Zea mays]
Length = 464
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE-CPACRTH--CASRRSLRDDLN 153
+ CP+C G++R+ + CLH FCR+CI + + + + CP C C LR D N
Sbjct: 19 MTCPLCRGLLREATAIALCLHTFCRDCIVEKINDDDADCCPVCNIDLGCDPEEKLRPDHN 78
Query: 154 YDALIAALYPDIDKYEEEELAFQDEEAARNKQ--IQASIAQTFQRQTEALGRKRTPKSTS 211
+ ++P I K + A+ KQ + + + T + + G T K T
Sbjct: 79 LQDIRNKVFP-IKKINADSPKSLTTLPAKRKQRSLSSLVVDTPRSVVKRTG--LTGKRTK 135
Query: 212 ALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDANGDAGKDSSSADERSTEVRPKRRKRW 271
A R++ +P+ T+ + D+ D + + + ++ TE + ++ R
Sbjct: 136 AKRKTVASSAASPINNGTMQLPTKFENRDQKTDKSCASQSTNVASAANKTENQDLKKTRK 195
Query: 272 YGARFSQSSSAAAGTDGGGDENDSEV 297
A+ QS+ AA + D +V
Sbjct: 196 TSAK--QSTRAATSANRKQQNTDVDV 219
>gi|157114429|ref|XP_001652267.1| ring finger protein [Aedes aegypti]
gi|108877311|gb|EAT41536.1| AAEL006839-PB [Aedes aegypti]
Length = 223
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+KL + K + C IC G TV ECLH FC+ C+ K + NN CP C+
Sbjct: 5 IKLKTLNKHITCEICKGYFIDATTVTECLHTFCKSCLVKHLE-ENNTCPTCQ 55
>gi|40747978|gb|AAR89523.1| breast cancer 1 [Tetraodon nigroviridis]
Length = 1267
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM---RLGNNECPACRTHC 142
V ++S + + +QCPICL ++ + + +C H+FCR C+ K + + CP C++
Sbjct: 9 VKKRISLLWETLQCPICLDLMSEPVST-KCDHQFCRFCMLKLLSNTKQNKANCPVCKSKI 67
Query: 143 ASRRSLRDDLNYDALIAALYPDIDKYE 169
++RSL++ + L++ L I YE
Sbjct: 68 -TKRSLQESPGFQRLVSGLQEIILAYE 93
>gi|71029014|ref|XP_764150.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351104|gb|EAN31867.1| hypothetical protein TP04_0515 [Theileria parva]
Length = 309
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+ K+ +CPIC I+ K T C H FC+ CID+A+ N CP CR +S+ S
Sbjct: 3 VPKDFECPICFNILYKPVTT-SCGHNFCKFCIDQAIHSSPN-CPLCRIPLSSQYS 55
>gi|170068277|ref|XP_001868804.1| polycomb group RING finger protein 3 [Culex quinquefasciatus]
gi|167864343|gb|EDS27726.1| polycomb group RING finger protein 3 [Culex quinquefasciatus]
Length = 223
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+KL + K + C IC G TV ECLH FC+ C+ K + NN CP C
Sbjct: 5 IKLKTLNKHITCEICSGYFIDATTVTECLHTFCKSCLVKHLE-ENNTCPTC 54
>gi|354474513|ref|XP_003499475.1| PREDICTED: polycomb complex protein BMI-1-like [Cricetulus griseus]
Length = 523
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 206 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 264
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 265 LLNIRSDKTLQDIVYKLVPGLFKNE 289
>gi|392343333|ref|XP_003754856.1| PREDICTED: polycomb group RING finger protein 6-like [Rattus
norvegicus]
Length = 144
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 67 DGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDK 126
DG+E +G +E V LS + + C IC G + + ECLH FC+ CI K
Sbjct: 3 DGSEFRHPNPEREGSDEEKHFVPLSQLAPFISCSICKGYLIDATAITECLHTFCKSCIVK 62
Query: 127 AMRLGNNECPAC 138
+N CP C
Sbjct: 63 HFE-HSNRCPKC 73
>gi|363746044|ref|XP_003643507.1| PREDICTED: polycomb group RING finger protein 1-like, partial
[Gallus gallus]
Length = 249
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 77 SGDGEKD--EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE 134
+GDG E V VK+ ++ + + C +C G T+ ECLH FC+ CI K ++ +
Sbjct: 12 AGDGAVSLQEEVKVKMKELNEHIVCCLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKY 70
Query: 135 CPACRTHCASRR---SLRDDLNYDALIAALYPDIDKYEEEEL 173
CP C T + +L+ D ++ L P + + EE+ +
Sbjct: 71 CPMCNTKIHETQPLLNLKLDRVMQDIVYKLVPGLQESEEKRI 112
>gi|326678847|ref|XP_001342383.3| PREDICTED: tripartite motif-containing protein 35-like [Danio
rerio]
Length = 452
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN-ECPACRTHCASRRSLRDDL 152
CP+C I KT ++ C H FC+EC+ + R N ECP CR RRS + DL
Sbjct: 11 CPVCHDIF-KTPVILSCTHSFCKECLQQFWRSKNTQECPVCR-----RRSSKKDL 59
>gi|355709604|gb|AES03647.1| polycomb group ring finger 1 [Mustela putorius furo]
Length = 95
Score = 50.1 bits (118), Expect = 0.003, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCA 143
E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 1 EEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPMCNIKIH 59
Query: 144 SRR---SLRDDLNYDALIAALYPDIDKYEEEEL 173
+ +L+ D ++ L P + EE+ +
Sbjct: 60 ETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRI 92
>gi|335310264|ref|XP_003361952.1| PREDICTED: polycomb group RING finger protein 1-like [Sus scrofa]
Length = 262
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 80 GEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
G+ E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 63 GDFQEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMCN 121
Query: 140 THCASRR---SLRDDLNYDALIAALYPDIDKYEEEEL 173
+ +L+ D ++ L P + EE+ +
Sbjct: 122 IKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRI 158
>gi|431890708|gb|ELK01587.1| Polycomb group RING finger protein 2 [Pteropus alecto]
Length = 144
Score = 50.1 bits (118), Expect = 0.003, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|193643640|ref|XP_001947143.1| PREDICTED: polycomb group RING finger protein 3-like [Acyrthosiphon
pisum]
Length = 224
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 87 IVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
++KL + + C IC G + TV ECLH FC+ C+ K + NN CP C+
Sbjct: 4 LIKLKTLNCHITCKICRGYLVDATTVTECLHTFCKSCLVKHLE-ENNSCPTCQ 55
>gi|426352202|ref|XP_004043605.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Gorilla gorilla
gorilla]
Length = 474
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA--MRLGNNECPACRTHCASRRS 147
++ +++EV CPICL I++K T+ +C H FC +CI + G +CP C+T S
Sbjct: 7 VNKLQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKT------S 59
Query: 148 LRDD-LNYDALIAALYPDIDKYEEEELAFQDEEAA 181
+R + + +++L+ L I + E+ + +EA
Sbjct: 60 VRKNAIRFNSLLWNLVEKIQALQASEVQSKRKEAT 94
>gi|325179777|emb|CCA14180.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 844
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
++L D++K V C +C RK+ + +C H FC++CID ++ N +CP+C+
Sbjct: 780 LELKDLQKIVNCSVCQDR-RKSVIISKCYHMFCKDCIDSNLKARNRKCPSCK 830
>gi|209881694|ref|XP_002142285.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
gi|209557891|gb|EEA07936.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
Length = 279
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
V ++ I ++CP+C G R T+ ECLH FC CI + G CP C
Sbjct: 34 VAFRIKVIADLLECPLCKGFFRNATTIKECLHTFCNVCIINYIESGKESCPKC 86
>gi|344283744|ref|XP_003413631.1| PREDICTED: polycomb group RING finger protein 1-like [Loxodonta
africana]
Length = 447
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC 142
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 219 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPMCNIKI 277
Query: 143 ASRRSLRD---DLNYDALIAALYPDIDKYEEEEL 173
+ L + D ++ L P + EE+ +
Sbjct: 278 HETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRI 311
>gi|426240771|ref|XP_004014267.1| PREDICTED: COMM domain-containing protein 3-like isoform 1 [Ovis
aries]
Length = 469
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|22331268|ref|NP_188946.2| putative E3 ubiquitin protein ligase DRIPH [Arabidopsis thaliana]
gi|75311516|sp|Q9LS86.1|DRIPH_ARATH RecName: Full=Probable E3 ubiquitin protein ligase DRIPH; AltName:
Full=DREB2A-interacting protein homolog
gi|9294195|dbj|BAB02097.1| unnamed protein product [Arabidopsis thaliana]
gi|20466758|gb|AAM20696.1| RING zinc finger protein, putative [Arabidopsis thaliana]
gi|30387603|gb|AAP31967.1| At3g23060 [Arabidopsis thaliana]
gi|332643190|gb|AEE76711.1| putative E3 ubiquitin protein ligase DRIPH [Arabidopsis thaliana]
Length = 480
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 92 DIRKEVQCPICLGIIRKTRTVMECLHRFCRECI-DKAMRLGNNECPACRTHCA--SRRSL 148
+++ + CPIC + T+ ECLH FCR CI +K + N CP C + L
Sbjct: 9 EVKPCLACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPVCNVNLGVFPLEKL 68
Query: 149 RDDLNYDALIAALY 162
R D + L +Y
Sbjct: 69 RSDCTWQDLKLKIY 82
>gi|403262120|ref|XP_003923443.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21 [Saimiri boliviensis
boliviensis]
Length = 475
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+L+ + +EV CPICL + ++ EC H FC+ECI + R G CP CR
Sbjct: 6 RLTMMWEEVTCPICLDPFVEPVSI-ECGHSFCQECISEVGRNGGGVCPVCR 55
>gi|302786086|ref|XP_002974814.1| hypothetical protein SELMODRAFT_414938 [Selaginella moellendorffii]
gi|300157709|gb|EFJ24334.1| hypothetical protein SELMODRAFT_414938 [Selaginella moellendorffii]
Length = 400
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRT 140
E V V + + + CP+C ++ + T+ ECLH FCRECI ++L ++ CP C
Sbjct: 2 EVVKVARAPLVACLTCPLCSSLLDEATTICECLHSFCRECIH--LKLSEDDTQSCPICDV 59
Query: 141 H--CASRRSLRDDLNYDALIAALY 162
+ A LR D D L L+
Sbjct: 60 YLGVAPLEKLRPDPQLDELRNKLF 83
>gi|444731073|gb|ELW71439.1| Polycomb complex protein BMI-1 [Tupaia chinensis]
Length = 383
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 97 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 155
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 156 LLNIRSDKTLQDIVYKLVPGLFKNE 180
>gi|74002888|ref|XP_535762.2| PREDICTED: E3 ubiquitin-protein ligase DTX3L [Canis lupus
familiaris]
Length = 736
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 18/83 (21%)
Query: 65 DVDGNESD-------RSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLH 117
D D N+S+ S SSG +D ++E +C IC+ IIR +++C H
Sbjct: 526 DTDSNDSEMASPTLQHSVSSGGSGED----------KEEDKCSICMDIIRNKHVLLKCKH 575
Query: 118 RFCRECIDKAMRLGNNECPACRT 140
FC CIDKA+ CP C+T
Sbjct: 576 AFCTPCIDKALSY-KPVCPVCQT 597
>gi|255580929|ref|XP_002531283.1| ring finger protein, putative [Ricinus communis]
gi|223529116|gb|EEF31096.1| ring finger protein, putative [Ricinus communis]
Length = 445
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRT 140
+ V VK I + CP+C ++R T+ CLH FCR+CI + +L + E CP C
Sbjct: 4 QVVKVKREIIEACMTCPLCNKLLRDATTISLCLHTFCRKCIYE--KLSDEEGDCCPVCDI 61
Query: 141 H--CASRRSLRDDLNYDALIAALYP 163
C LR D N + A ++P
Sbjct: 62 DLGCLPVEKLRPDHNLQDIRAKIFP 86
>gi|260815444|ref|XP_002602483.1| hypothetical protein BRAFLDRAFT_86868 [Branchiostoma floridae]
gi|229287793|gb|EEN58495.1| hypothetical protein BRAFLDRAFT_86868 [Branchiostoma floridae]
Length = 730
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECIDK-AMRLGNNECPACRTHCASRRSLRDDLNYD 155
+ CP+C+ R R V+ CLH FCREC+ + A + ECP CRTH + D L +
Sbjct: 16 LTCPVCMLHFRDPR-VLPCLHTFCRECLQEWATKQQPLECPTCRTHVSLPDQGVDGLRTN 74
Query: 156 ALIAAL--YPDIDKYEEEELAFQ----DEEAARNKQIQASI 190
+ L + + K + Q EE AR+ +Q ++
Sbjct: 75 FYVNNLLDFAAVKKVAGPGVPCQVCEGKEEGARSWCVQCAV 115
>gi|255580467|ref|XP_002531059.1| brca1 associated ring domain, putative [Ricinus communis]
gi|223529354|gb|EEF31320.1| brca1 associated ring domain, putative [Ricinus communis]
Length = 987
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+ L + E++CPICL ++ + + C H FC CI K+M+ G+N CP C+ RR
Sbjct: 5 IHLEKMGTELKCPICLSLLN-SAVSLTCNHIFCNSCIVKSMKSGSN-CPVCKVP-YQRRE 61
Query: 148 LRDDLNYDALIAALYPDIDKYEEEELAFQ 176
+R + D L+ +I K E FQ
Sbjct: 62 VRAAPHMDNLV-----NIYKSMEAASGFQ 85
>gi|115313716|gb|AAI23924.1| novel protein similar to zinc finger nuclear phosphoprotein (xnf7)
[Xenopus (Silurana) tropicalis]
Length = 637
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 82 KDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN-ECPAC 138
K+E + D+ +E+ CP+CL + ++ ++EC H FC+ CI+ A + N+ CP C
Sbjct: 158 KNELPLAPAKDLAEELTCPLCLELFKEP-VMVECSHNFCKSCIENAWEVQNSVSCPEC 214
>gi|296217197|ref|XP_002754899.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21 [Callithrix jacchus]
Length = 475
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+L+ + +EV CPICL + ++ EC H FC+ECI + R G CP CR
Sbjct: 6 RLTMMWEEVTCPICLDPFVEPVSI-ECGHSFCQECISEVGRNGGGVCPVCR 55
>gi|226479844|emb|CAX73218.1| Polycomb group RING finger protein 3 [Schistosoma japonicum]
Length = 246
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
DE ++LSD+ + + C +C G + ++ ECLH FC+ CI K ECP C
Sbjct: 6 DELPAIQLSDLNEFITCKLCKGYLIDAVSITECLHSFCKSCIVKYSE-EKRECPVC 60
>gi|348536470|ref|XP_003455719.1| PREDICTED: hypothetical protein LOC100707220 [Oreochromis
niloticus]
Length = 491
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 77 SGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECP 136
SG G K + D + C +C G + K TV ECLH FC+ CI + +N+CP
Sbjct: 247 SGTGRKH-----LVRDFNHFITCYLCRGYLIKPTTVTECLHTFCKSCIVQHFE-ESNDCP 300
Query: 137 ACRTHCASRRS---LRDDLNYDALIAALYPDIDKYEE-EELAF 175
C LR D + +I L P + + EE +EL F
Sbjct: 301 KCGIQVHETNPLEMLRLDNTLEEIIFKLVPGLRENEEQQELEF 343
>gi|231291746|dbj|BAH58735.1| tripartite motif-containing 31 gamma [Homo sapiens]
Length = 262
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA--MRLGNNECPACRTHCASRRS 147
++ +++EV CPICL I++K T+ +C H FC +CI + G +CP C+T S R
Sbjct: 7 VNKLQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKT---SVR- 61
Query: 148 LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAA 181
RD + +++L+ L I + E+ + +EA
Sbjct: 62 -RDAIRFNSLLRNLVEKIQALQASEVQSKRKEAT 94
>gi|56753730|gb|AAW25062.1| SJCHGC01341 protein [Schistosoma japonicum]
Length = 246
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
DE ++LSD+ + + C +C G + ++ ECLH FC+ CI K ECP C
Sbjct: 6 DELPAIQLSDLNEFITCKLCKGYLIDAVSITECLHSFCKSCIVKYSE-EKRECPVC 60
>gi|348542744|ref|XP_003458844.1| PREDICTED: zinc-binding protein A33-like [Oreochromis niloticus]
Length = 485
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSL 148
+++++ CP+C GI R ++ C H FCREC+ K N +CP CR C +++
Sbjct: 13 LQQDLTCPVCQGIFRDP-MLLPCTHSFCRECLVKNWEY-NKKCPVCREVCEEDKAI 66
>gi|90960948|dbj|BAE92827.1| tripartite motif protein 31, isoform alpha [Pan troglodytes]
Length = 426
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA--MRLGNNECPACRTHCASRRS 147
++ +++EV CPICL I++K T+ +C H FC +CI + G +CP C+T S
Sbjct: 7 VNKLQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKT------S 59
Query: 148 LRDD-LNYDALIAALYPDIDKYEEEELAFQDEEAA 181
+R + + +++L+ L I + E+ + +EA
Sbjct: 60 VRKNAIRFNSLLXNLVEKIQALQASEVQSKRKEAT 94
>gi|90960950|dbj|BAE92828.1| tripartite motif protein 31, isoform alpha [Pan troglodytes]
Length = 426
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA--MRLGNNECPACRTHCASRRS 147
++ +++EV CPICL I++K T+ +C H FC +CI + G +CP C+T S
Sbjct: 7 VNKLQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKT------S 59
Query: 148 LRDD-LNYDALIAALYPDIDKYEEEELAFQDEEAA 181
+R + + +++L+ L I + E+ + +EA
Sbjct: 60 VRKNAIRFNSLLXNLVEKIQALQASEVQSKRKEAT 94
>gi|387018154|gb|AFJ51195.1| Polycomb group RING finger protein 5-like [Crotalus adamanteus]
Length = 256
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCCICKGYLIKPTTVTECLHTFCKSCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQ 187
LR D + +I L P + E+EL + E +NK I+
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REKELHREAEFWKKNKPIE 105
>gi|326923721|ref|XP_003208083.1| PREDICTED: polycomb group RING finger protein 5-like [Meleagris
gallopavo]
Length = 326
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 79 VKDFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 137
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 138 MLRLDNTLEEIIFKLVPGL---REQELQREIEFWKKNK 172
>gi|148682085|gb|EDL14032.1| mCG1030969 [Mus musculus]
Length = 257
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 87 IVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRT---HCA 143
++ LS + + C IC G + T+ ECLH FC+ CI K +N CP C
Sbjct: 136 LIPLSQMIPYISCFICKGYLIDAATITECLHTFCKSCIVKHFE-HSNRCPKCNIIVHQAK 194
Query: 144 SRRSLRDDLNYDALIAALYPDIDKYEEEE 172
++LR D +++ L +++ E+++
Sbjct: 195 PHKNLRMDPQLQSIVYKLVAGLEENEKKQ 223
>gi|395539960|ref|XP_003771930.1| PREDICTED: uncharacterized protein LOC100928474 [Sarcophilus
harrisii]
Length = 802
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 483 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 541
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 542 LLNIRSDKTLQDIVYKLVPGLFKNE 566
>gi|328777335|ref|XP_393893.4| PREDICTED: hypothetical protein LOC410413 [Apis mellifera]
Length = 1024
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE--CPACR 139
L ++ + CP+C G + TV+ECLH FCR CI K + N E CP+C+
Sbjct: 10 LREVNPYLICPLCRGYLIDATTVVECLHSFCRSCILKHL---NTEAHCPSCK 58
>gi|431895476|gb|ELK04992.1| Cytosolic purine 5'-nucleotidase [Pteropus alecto]
Length = 897
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 87 IVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
++ LS++ + + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 123 LINLSELTQYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 173
>gi|14043225|gb|AAH07602.1| Polycomb group ring finger 6 [Homo sapiens]
Length = 277
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 116 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 174
>gi|37655165|ref|NP_115530.2| polycomb group RING finger protein 6 isoform b [Homo sapiens]
gi|119570035|gb|EAW49650.1| polycomb group ring finger 6, isoform CRA_d [Homo sapiens]
Length = 275
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 114 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 172
>gi|114632656|ref|XP_001135053.1| PREDICTED: polycomb group RING finger protein 6 isoform 1 [Pan
troglodytes]
Length = 275
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 114 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 172
>gi|344255690|gb|EGW11794.1| Polycomb group RING finger protein 1 [Cricetulus griseus]
Length = 512
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC 142
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 19 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMCNIKI 77
Query: 143 ASRR---SLRDDLNYDALIAALYPDIDKYEEEEL 173
+ +L+ D ++ L P + EE+ +
Sbjct: 78 HETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRI 111
>gi|255551951|ref|XP_002517020.1| ring finger protein, putative [Ricinus communis]
gi|223543655|gb|EEF45183.1| ring finger protein, putative [Ricinus communis]
Length = 434
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRTH--CASRRSLRDD 151
+ CP+C + R T+ ECLH FCR+CI + ++ + E CP C C+ LR D
Sbjct: 19 MTCPLCNKLFRDATTISECLHTFCRKCIYR--KITDEEFDNCPVCNIDLGCSPLEKLRAD 76
Query: 152 LNYDALIAALYP 163
+ + L +P
Sbjct: 77 HSLEDLKTKFFP 88
>gi|226507070|ref|NP_001150954.1| protein binding protein [Zea mays]
gi|195643190|gb|ACG41063.1| protein binding protein [Zea mays]
Length = 387
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRTH- 141
V+++ S + + CP+C ++R T+ ECLH FCR+CI + N E CP C
Sbjct: 31 VMLRRSGLAACLTCPLCGRLLRDAATITECLHTFCRKCISE--EFVNKEVCCCPVCSIDL 88
Query: 142 -CASRRSLRDDLNYDALIAALYPDID-KYEEEEL 173
CA LR D + + + ++P K E+ E+
Sbjct: 89 GCAPLEKLRIDHSLQYVRSKVFPSKKRKVEDPEV 122
>gi|403260162|ref|XP_003922551.1| PREDICTED: polycomb group RING finger protein 6 [Saimiri
boliviensis boliviensis]
Length = 418
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 182 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 240
>gi|395827235|ref|XP_003786810.1| PREDICTED: polycomb complex protein BMI-1 [Otolemur garnettii]
Length = 469
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|414873396|tpg|DAA51953.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 387
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRTH- 141
V+++ S + + CP+C ++R T+ ECLH FCR+CI + N E CP C
Sbjct: 31 VMLRRSGLAACLTCPLCGRLLRDAATITECLHTFCRKCISE--EFVNKEVCCCPVCSIDL 88
Query: 142 -CASRRSLRDDLNYDALIAALYPDID-KYEEEEL 173
CA LR D + + + ++P K E+ E+
Sbjct: 89 GCAPLEKLRIDHSLQYVRSKVFPSKKRKVEDPEV 122
>gi|403278207|ref|XP_003945245.1| PREDICTED: LOW QUALITY PROTEIN: polycomb complex protein BMI-1
[Saimiri boliviensis boliviensis]
Length = 469
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|390603078|gb|EIN12470.1| hypothetical protein PUNSTDRAFT_141167 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1053
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 13/74 (17%)
Query: 79 DGEKDEFVIVKLSDI---RKEVQ--------CPICLGIIRKTRTV--MECLHRFCRECID 125
D EK I+K SD+ KE + C ICL +T + M C H F ++C+D
Sbjct: 963 DIEKSGLQIIKPSDLAQYEKEGKVASNCVDRCLICLDDYAETDELRLMTCRHTFHKDCVD 1022
Query: 126 KAMRLGNNECPACR 139
K M+ G N CPACR
Sbjct: 1023 KWMQTGRNNCPACR 1036
>gi|158254794|dbj|BAF83368.1| unnamed protein product [Homo sapiens]
Length = 350
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 114 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 172
>gi|397501528|ref|XP_003821435.1| PREDICTED: polycomb complex protein BMI-1 [Pan paniscus]
Length = 469
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|219112611|ref|XP_002178057.1| sex comb extra [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410942|gb|EEC50871.1| sex comb extra [Phaeodactylum tricornutum CCAP 1055/1]
Length = 411
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 19/86 (22%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCA------ 143
L + E +C ICL IR TRTV+ECLHRFC + L + + HC
Sbjct: 171 LKALNAEFRCAICLDYIRSTRTVVECLHRFC-----EGWYLPDT---VLKDHCVWAGMSA 222
Query: 144 -----SRRSLRDDLNYDALIAALYPD 164
S+RSL D ++D ++ ++ D
Sbjct: 223 PYAVPSKRSLAADPDFDRIVNSILGD 248
>gi|345792753|ref|XP_003433662.1| PREDICTED: polycomb group RING finger protein 6 isoform 1 [Canis
lupus familiaris]
Length = 274
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 113 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 171
>gi|297687308|ref|XP_002821159.1| PREDICTED: polycomb group RING finger protein 6 isoform 1 [Pongo
abelii]
Length = 350
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 114 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 172
>gi|114606233|ref|XP_001148040.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 isoform 1 [Pan
troglodytes]
Length = 474
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA--MRLGNNECPACRTHCASRRS 147
++ +++EV CPICL I++K T+ +C H FC +CI + G +CP C+T S
Sbjct: 7 VNKLQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKT------S 59
Query: 148 LRDD-LNYDALIAALYPDIDKYEEEELAFQDEEAA 181
+R + + +++L+ L I + E+ + +EA
Sbjct: 60 VRKNAIRFNSLLRNLVEKIQALQASEVQSKRKEAT 94
>gi|91094599|ref|XP_966675.1| PREDICTED: similar to posterior sex combs protein [Tribolium
castaneum]
Length = 798
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC-ASRR 146
+KL +I + C +C G + T+ ECLH FCR CI K ++ N CP C ++
Sbjct: 10 IKLVEINSYLTCYLCKGYLIDATTISECLHSFCRSCIIKFLQ-KNCYCPVCEVIINKAKP 68
Query: 147 SLRDDLNYDALIAALYPDI 165
L+ D ++ L P +
Sbjct: 69 CLKLDKTLQDIVYKLVPGL 87
>gi|440912392|gb|ELR61962.1| Polycomb group RING finger protein 6, partial [Bos grunniens mutus]
Length = 296
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E++E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 75 DSEEEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 133
>gi|13537206|dbj|BAB40779.1| hMBLR [Homo sapiens]
gi|16307386|gb|AAH10235.1| Polycomb group ring finger 6 [Homo sapiens]
gi|167773431|gb|ABZ92150.1| polycomb group ring finger 6 [synthetic construct]
gi|167774201|gb|ABZ92535.1| polycomb group ring finger 6 [synthetic construct]
Length = 352
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 116 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 174
>gi|58761530|ref|NP_001011663.1| polycomb group RING finger protein 6 isoform a [Homo sapiens]
gi|116242703|sp|Q9BYE7.2|PCGF6_HUMAN RecName: Full=Polycomb group RING finger protein 6; AltName:
Full=Mel18 and Bmi1-like RING finger; AltName: Full=RING
finger protein 134
gi|119570033|gb|EAW49648.1| polycomb group ring finger 6, isoform CRA_b [Homo sapiens]
gi|306921473|dbj|BAJ17816.1| polycomb group ring finger 6 [synthetic construct]
Length = 350
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 114 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 172
>gi|114632654|ref|XP_508012.2| PREDICTED: polycomb group RING finger protein 6 isoform 2 [Pan
troglodytes]
gi|410212244|gb|JAA03341.1| polycomb group ring finger 6 [Pan troglodytes]
gi|410259878|gb|JAA17905.1| polycomb group ring finger 6 [Pan troglodytes]
gi|410331781|gb|JAA34837.1| polycomb group ring finger 6 [Pan troglodytes]
Length = 350
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 114 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 172
>gi|38086587|ref|XP_142049.3| PREDICTED: polycomb group RING finger protein 6-like [Mus musculus]
gi|83002894|ref|XP_913741.1| PREDICTED: polycomb group RING finger protein 6-like [Mus musculus]
Length = 230
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 87 IVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR--THCA- 143
++ LS + + C IC G + T+ ECLH FC+ CI K +N CP C H A
Sbjct: 109 LIPLSQMIPYISCFICKGYLIDAATITECLHTFCKSCIVKHFE-HSNRCPKCNIIVHQAK 167
Query: 144 SRRSLRDDLNYDALIAALYPDIDKYEEEE 172
++LR D +++ L +++ E+++
Sbjct: 168 PHKNLRMDPQLQSIVYKLVAGLEENEKKQ 196
>gi|345484667|ref|XP_003425097.1| PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Nasonia
vitripennis]
Length = 572
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 13/123 (10%)
Query: 48 NLEEQQPPQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKE-VQCPICLGII 106
NL Q P ++ + +++ + SS +DE VI K+++I E + C IC +
Sbjct: 428 NLNNQLPTMETIDLTS------DAESTSSSFKNCQDEAVIDKVNNIMDEQLTCSICSELF 481
Query: 107 RKTRTVMECLHRFCRECIDKAM-RLGNNE---CPACRTHCASR-RSLRDDLNYDALIAAL 161
+ T + C H FCR CID + R NE CP CRT S RSL D + ++ L
Sbjct: 482 VRAMT-LNCTHTFCRHCIDLWIERKPPNERQNCPTCRTKIVSMTRSLVVDNFIEKMLETL 540
Query: 162 YPD 164
P+
Sbjct: 541 TPE 543
>gi|330802610|ref|XP_003289308.1| hypothetical protein DICPUDRAFT_98314 [Dictyostelium purpureum]
gi|325080606|gb|EGC34154.1| hypothetical protein DICPUDRAFT_98314 [Dictyostelium purpureum]
Length = 713
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMR----LGNNECPAC 138
+ + K ++CP+C+GII++ + + C HR C ECI A++ +CP C
Sbjct: 1 MCKLMKAIKCPVCVGIIKQPQKIKPCKHRVCLECIQSAIKHSLDPSATKCPVC 53
>gi|443925001|gb|ELU43935.1| zf-C3HC4 domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 560
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 65 DVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECI 124
DV E D G GE+ + + D E+ C ICLG++ TV+ CLH F ++C+
Sbjct: 18 DVSPEEEDHE---GVGEESQISTFSIDD---EISCGICLGVLESPYTVIPCLHTFDKDCL 71
Query: 125 DKAMRLGNNECPACRTHCASRR 146
+ N+ CP C+T S R
Sbjct: 72 LGWWQR-NDTCPLCKTRATSGR 92
>gi|399216056|emb|CCF72744.1| unnamed protein product [Babesia microti strain RI]
Length = 428
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
DG+ V +L + + C +C G+ T+ CLH FC+ CI L +CP C
Sbjct: 168 DGDMMVDVKFRLKILFNHLTCKLCKGLFFNAYTIKNCLHTFCKSCIITYAILVGQQCPVC 227
Query: 139 RTHCASRRSLRDDLNYD----ALIAALYP 163
H +L + + YD +++ L+P
Sbjct: 228 --HQNINTNLEESIEYDNCIQSMVDKLFP 254
>gi|126273453|ref|XP_001378665.1| PREDICTED: polycomb group RING finger protein 6-like [Monodelphis
domestica]
Length = 425
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 189 DSEDEEERMISLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 247
>gi|73998781|ref|XP_852021.1| PREDICTED: polycomb group RING finger protein 6 isoform 2 [Canis
lupus familiaris]
Length = 349
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 113 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 171
>gi|402879774|ref|XP_003903504.1| PREDICTED: polycomb complex protein BMI-1 [Papio anubis]
Length = 469
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|297689565|ref|XP_002822205.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21 [Pongo abelii]
Length = 475
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+L+ + +EV CPICL + ++ EC H FC+ECI + + G + CP CR
Sbjct: 6 RLTMMWEEVTCPICLDPFMEPVSI-ECGHSFCQECISQVGKGGGSVCPVCR 55
>gi|270016418|gb|EFA12864.1| hypothetical protein TcasGA2_TC004246 [Tribolium castaneum]
Length = 838
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC-ASRR 146
+KL +I + C +C G + T+ ECLH FCR CI K ++ N CP C ++
Sbjct: 10 IKLVEINSYLTCYLCKGYLIDATTISECLHSFCRSCIIKFLQ-KNCYCPVCEVIINKAKP 68
Query: 147 SLRDDLNYDALIAALYPDI 165
L+ D ++ L P +
Sbjct: 69 CLKLDKTLQDIVYKLVPGL 87
>gi|397519274|ref|XP_003829791.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Pan paniscus]
Length = 460
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA--MRLGNNECPACRTHCASRRS 147
++ +++EV CPICL I++K T+ +C H FC +CI + G +CP C+T S
Sbjct: 7 VNKLQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKT------S 59
Query: 148 LRDD-LNYDALIAALYPDIDKYEEEELAFQDEEAA 181
+R + + +++L+ L I + E+ + +EA
Sbjct: 60 VRKNAIRFNSLLRNLVEKIQALQASEVQSKRKEAT 94
>gi|395548609|ref|XP_003775237.1| PREDICTED: RING finger protein 166-like [Sarcophilus harrisii]
Length = 383
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 16/95 (16%)
Query: 46 SNNLEEQQPPQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGI 105
S+ + QQPP PA++ S SD+ + CPICL +
Sbjct: 142 SSTQQRQQPPTAGAPASSPQPPAEPSASE----------------SDLETQYSCPICLEV 185
Query: 106 IRKTRTVMECLHRFCRECIDKAMRLGNNECPACRT 140
+ + C H FC EC+ +++ + CP CR
Sbjct: 186 YHRPVAIGNCGHVFCGECLQPCLQVPSPLCPLCRV 220
>gi|291402220|ref|XP_002717444.1| PREDICTED: BMI1 polycomb ring finger oncogene [Oryctolagus
cuniculus]
Length = 469
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|380012175|ref|XP_003690162.1| PREDICTED: uncharacterized protein LOC100863555 [Apis florea]
Length = 1019
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE--CPACR 139
L ++ + CP+C G + TV+ECLH FCR CI K + N E CP+C+
Sbjct: 10 LREVNPYLICPLCRGYLIDATTVVECLHSFCRSCILKHL---NTEAHCPSCK 58
>gi|348512208|ref|XP_003443635.1| PREDICTED: polycomb complex protein BMI-1-like [Oreochromis
niloticus]
Length = 567
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C +
Sbjct: 236 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYLET-SKYCPICDVQVHKTKP 294
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 295 LLNIRSDKTLQDIVYKLVPGLFKNE 319
>gi|113931534|ref|NP_001039216.1| tripartite motif containing 69 [Xenopus (Silurana) tropicalis]
gi|89272509|emb|CAJ82588.1| novel protein similar to zinc finger nuclear phosphoprotein (xnf7)
[Xenopus (Silurana) tropicalis]
Length = 637
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 82 KDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN-ECPAC 138
K+E + D+ +E+ CP+CL + ++ ++EC H FC+ CI+ A + N+ CP C
Sbjct: 158 KNELPLAPAKDLAEELTCPLCLELFKEP-VMVECSHNFCKSCIENAWEVRNSVSCPEC 214
>gi|348556239|ref|XP_003463930.1| PREDICTED: polycomb complex protein BMI-1-like [Cavia porcellus]
Length = 469
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|73997984|ref|XP_543923.2| PREDICTED: polycomb group RING finger protein 5 isoform 1 [Canis
lupus familiaris]
Length = 256
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGIQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|355783070|gb|EHH64991.1| hypothetical protein EGM_18328 [Macaca fascicularis]
Length = 350
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 114 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 172
>gi|323276616|ref|NP_001190991.1| COMMD3-BMI1 read-through protein [Homo sapiens]
Length = 469
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|224061053|ref|XP_002300335.1| predicted protein [Populus trichocarpa]
gi|222847593|gb|EEE85140.1| predicted protein [Populus trichocarpa]
Length = 1029
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLR 149
L + +E++CPICL ++ T + C H FC CI K+M+ G ++CP C+ RR +R
Sbjct: 33 LEKMGRELKCPICLSLL-DTAVSLTCNHVFCNSCIVKSMKSG-SDCPVCKVP-YRRREVR 89
Query: 150 DDLNYDALIA 159
+ D L++
Sbjct: 90 AAPHMDNLVS 99
>gi|322791296|gb|EFZ15813.1| hypothetical protein SINV_04327 [Solenopsis invicta]
Length = 1427
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSL- 148
L+ + +++ C +C G T++ECLH FC+ CI K + N CP C R L
Sbjct: 12 LAKLNEQLICKLCGGYFIDATTIIECLHSFCKSCIVKYLE-NNKYCPICDVQIHKSRPLL 70
Query: 149 --RDDLNYDALIAALYP 163
R D ++ L P
Sbjct: 71 NIRPDRMLQDIVYKLVP 87
>gi|302564245|ref|NP_001181540.1| polycomb group RING finger protein 6 [Macaca mulatta]
gi|402881389|ref|XP_003904256.1| PREDICTED: polycomb group RING finger protein 6 [Papio anubis]
Length = 350
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 114 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 172
>gi|441625691|ref|XP_003257751.2| PREDICTED: LOW QUALITY PROTEIN: polycomb complex protein BMI-1
isoform 2 [Nomascus leucogenys]
Length = 469
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|47223482|emb|CAF97969.1| unnamed protein product [Tetraodon nigroviridis]
Length = 300
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + N CP C +
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYLE-TNKYCPICDVQVHKTKP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|444723342|gb|ELW63999.1| Polycomb group RING finger protein 1 [Tupaia chinensis]
Length = 456
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC 142
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 19 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMCNIKI 77
Query: 143 ASRR---SLRDDLNYDALIAALYPDIDKYEEEEL 173
+ +L+ D ++ L P + EE+ +
Sbjct: 78 HETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRI 111
>gi|432880346|ref|XP_004073652.1| PREDICTED: polycomb group RING finger protein 3-like [Oryzias
latipes]
Length = 249
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+ L I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 14 INLCHINAHITCRLCEGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 64
>gi|363743503|ref|XP_003642857.1| PREDICTED: polycomb group RING finger protein 2-like [Gallus
gallus]
Length = 321
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDAATIVECLHSFCKTCIVRYLE-ANKYCPMCDAQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDI 165
S+R D ++ L P +
Sbjct: 66 LLSIRSDRTLQDVVYKLVPGL 86
>gi|296221130|ref|XP_002756615.1| PREDICTED: polycomb group RING finger protein 6 isoform 1
[Callithrix jacchus]
Length = 350
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 114 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 172
>gi|338722384|ref|XP_001915866.2| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
75 [Equus caballus]
Length = 470
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASR 145
L+ ++ E CPICL +R T+ EC H FCR CI ++ R CP CR C R
Sbjct: 7 LAGLQAEANCPICLDYLRDPVTI-ECGHNFCRSCIQQSWEDRWDMFPCPVCRHPCQQR 63
>gi|194227110|ref|XP_001496144.2| PREDICTED: COMM domain-containing protein 3-like isoform 1 [Equus
caballus]
Length = 469
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|32880219|ref|NP_872596.1| E3 ubiquitin-protein ligase TRIM21 [Bos taurus]
gi|75064284|sp|Q7YRV4.1|RO52_BOVIN RecName: Full=E3 ubiquitin-protein ligase TRIM21; AltName: Full=52
kDa Ro protein; AltName: Full=52 kDa ribonucleoprotein
autoantigen Ro/SS-A; AltName: Full=Ro(SS-A); AltName:
Full=Sjoegren syndrome type A antigen; Short=SS-A;
AltName: Full=Tripartite motif-containing protein 21
gi|32307867|gb|AAP79314.1| Ro52/SS-A autoantigen [Bos taurus]
gi|61555596|gb|AAX46732.1| 52kD Ro/SSA autoantigen [Bos taurus]
gi|133778349|gb|AAI23701.1| Tripartite motif-containing 21 [Bos taurus]
gi|296479868|tpg|DAA21983.1| TPA: 52 kDa Ro protein [Bos taurus]
Length = 469
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTH 141
V L+ + +EV C ICL + + ++ EC H FC+ECI + + G + CP CR H
Sbjct: 5 VPLTMMWEEVTCSICLDPMVEPMSI-ECGHSFCQECISEVGKEGGSVCPVCRRH 57
>gi|256084336|ref|XP_002578386.1| RING finger protein [Schistosoma mansoni]
Length = 246
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
DE ++LSD+ + + C +C G + ++ ECLH FC+ CI K ECP C
Sbjct: 6 DELPAIQLSDLNEFITCKLCKGYLIDAVSITECLHPFCKSCIVKYSE-EKRECPVC 60
>gi|109090466|ref|XP_001113708.1| PREDICTED: polycomb group RING finger protein 6-like isoform 1
[Macaca mulatta]
Length = 275
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 114 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 172
>gi|350589578|ref|XP_003130828.2| PREDICTED: polycomb complex protein BMI-1-like [Sus scrofa]
Length = 469
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|148227230|ref|NP_001084248.1| breast cancer 1, early onset [Xenopus laevis]
gi|15991720|gb|AAL13037.1|AF416868_1 breast and ovarian cancer susceptibility protein [Xenopus laevis]
Length = 1579
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM---RLGNNECPACRTHCASRR 146
+S ++K ++CPICL ++++ +C H FC+ C+ + + + G CP C+T +RR
Sbjct: 15 ISVMQKNLECPICLELMKEP-VATKCDHIFCKFCMLQLLSKKKKGTVPCPLCKTE-VTRR 72
Query: 147 SLRDDLNYDALIAALYPDIDKYE 169
SL++ + L+ I +E
Sbjct: 73 SLQESHRFKLLVEGQLKIIKAFE 95
>gi|74211363|dbj|BAE26436.1| unnamed protein product [Mus musculus]
Length = 324
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKNRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|417397603|gb|JAA45835.1| Putative polycomb group ring finger protein 5 [Desmodus rotundus]
Length = 236
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELQRESEFWKKNK 102
>gi|15208660|ref|NP_003132.2| E3 ubiquitin-protein ligase TRIM21 [Homo sapiens]
gi|114635781|ref|XP_508239.2| PREDICTED: E3 ubiquitin-protein ligase TRIM21 isoform 2 [Pan
troglodytes]
gi|133250|sp|P19474.1|RO52_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM21; AltName: Full=52
kDa Ro protein; AltName: Full=52 kDa ribonucleoprotein
autoantigen Ro/SS-A; AltName: Full=RING finger protein
81; AltName: Full=Ro(SS-A); AltName: Full=Sjoegren
syndrome type A antigen; Short=SS-A; AltName:
Full=Tripartite motif-containing protein 21
gi|337485|gb|AAA36581.1| 52-kD Ro/SSA ribonucleoprotein [Homo sapiens]
gi|665918|gb|AAB87094.1| 52 kda component of SS-A/Ro autoantigen [Homo sapiens]
gi|747927|gb|AAA79867.1| RO52 [Homo sapiens]
gi|14790039|gb|AAH10861.1| Tripartite motif-containing 21 [Homo sapiens]
gi|119589251|gb|EAW68845.1| tripartite motif-containing 21 [Homo sapiens]
gi|167773601|gb|ABZ92235.1| tripartite motif-containing 21 [synthetic construct]
gi|261858824|dbj|BAI45934.1| tripartite motif-containing 21 [synthetic construct]
gi|410219268|gb|JAA06853.1| tripartite motif containing 21 [Pan troglodytes]
gi|410257202|gb|JAA16568.1| tripartite motif containing 21 [Pan troglodytes]
gi|410295476|gb|JAA26338.1| tripartite motif containing 21 [Pan troglodytes]
gi|410341117|gb|JAA39505.1| tripartite motif containing 21 [Pan troglodytes]
Length = 475
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+L+ + +EV CPICL + ++ EC H FC+ECI + + G + CP CR
Sbjct: 6 RLTMMWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKGGGSVCPVCR 55
>gi|410976039|ref|XP_003994433.1| PREDICTED: polycomb group RING finger protein 6 [Felis catus]
Length = 272
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 36 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 94
>gi|148224664|ref|NP_001084523.1| polycomb group ring finger 2 [Xenopus laevis]
gi|46250310|gb|AAH68725.1| MGC81178 protein [Xenopus laevis]
Length = 317
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 14/120 (11%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + + CP C + R
Sbjct: 7 IKMTELNPHLMCALCGGYFIDAATIVECLHSFCKTCILRYLE-AHKFCPMCDSQVHKGRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRK 204
S+R D ++ L P + F+D E R + AS +++ + G+K
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGL---------FRD-EMKRRRDFYASYSRSKDNSSSEQGQK 115
>gi|1177330|emb|CAA64746.1| Ring1 [Rattus norvegicus]
Length = 49
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMR 129
+ V + E+ CPICL +++ T T EC HRFC +CI A+R
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECCHRFCSDCIVTALR 49
>gi|56119143|ref|NP_001007989.1| polycomb complex protein BMI-1 [Gallus gallus]
gi|82196525|sp|Q5SDR3.1|BMI1_CHICK RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|52078091|gb|AAU25821.1| BMI1 [Gallus gallus]
Length = 326
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|426245019|ref|XP_004016313.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21 [Ovis aries]
Length = 465
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTH 141
V L+ + +EV C ICL + + ++ EC H FC+ECI + + G + CP CR H
Sbjct: 5 VPLTMMWEEVTCSICLDPMVEPMSI-ECGHSFCQECISEVGKEGGSVCPVCRRH 57
>gi|213626803|gb|AAI70141.1| Breast and ovarian cancer susceptibility protein [Xenopus laevis]
Length = 1579
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM---RLGNNECPACRTHCASRR 146
+S ++K ++CPICL ++++ +C H FC+ C+ + + + G CP C+T +RR
Sbjct: 15 ISVMQKNLECPICLELMKEP-VATKCDHIFCKFCMLQLLSKKKKGTVPCPLCKTE-VTRR 72
Query: 147 SLRDDLNYDALIAALYPDIDKYE 169
SL++ + L+ I +E
Sbjct: 73 SLQESHRFKLLVEGQLKIIKAFE 95
>gi|426253029|ref|XP_004020204.1| PREDICTED: polycomb group RING finger protein 6 isoform 1 [Ovis
aries]
Length = 352
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 116 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 174
>gi|149690102|ref|XP_001498250.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
6-like [Equus caballus]
Length = 351
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 115 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 173
>gi|1770499|emb|CAA69165.1| put. ring protein [Homo sapiens]
Length = 236
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA--MRLGNNECPACRTHCASRRS 147
++ +++EV CPICL I++K T+ +C H FC +CI + G +CP C+T S R
Sbjct: 7 VNKLQEEVICPICLDILQKPVTI-DCGHNFCPQCITQIGETSCGFFKCPLCKT---SVR- 61
Query: 148 LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAA 181
RD + +++L+ L I + E+ + +EA
Sbjct: 62 -RDAIRFNSLLRNLVEKIQALQASEVQSKRKEAT 94
>gi|242021573|ref|XP_002431219.1| Polycomb group RING finger protein, putative [Pediculus humanus
corporis]
gi|212516468|gb|EEB18481.1| Polycomb group RING finger protein, putative [Pediculus humanus
corporis]
Length = 221
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+KL + + C IC G + TV ECLH FC+ C+ K + NN CP C
Sbjct: 5 IKLKTLNSHITCKICRGYLIDATTVTECLHTFCKSCLVKHLE-ENNTCPTC 54
>gi|148676158|gb|EDL08105.1| mCG9550, isoform CRA_b [Mus musculus]
Length = 334
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 17 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 75
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 76 LLNIRSDKTLQDIVYKLVPGLFKNE 100
>gi|14994115|gb|AAK76432.1|AF391283_1 SSA1 [Homo sapiens]
Length = 475
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+L+ + +EV CPICL + ++ EC H FC+ECI + + G + CP CR
Sbjct: 6 RLTMMWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKGGGSVCPVCR 55
>gi|332862823|ref|XP_001147119.2| PREDICTED: polycomb complex protein BMI-1 isoform 2, partial [Pan
troglodytes]
Length = 332
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 13 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 71
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 72 LLNIRSDKTLQDIVYKLVPGLFKNE 96
>gi|194883476|ref|XP_001975827.1| GG22533 [Drosophila erecta]
gi|190659014|gb|EDV56227.1| GG22533 [Drosophila erecta]
Length = 1573
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC-ASRR 146
V L+ + + C +C G + T++ECLH FC C+ +R CP C ++
Sbjct: 226 VLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLR-KERFCPRCEMVINNAKP 284
Query: 147 SLRDDLNYDALIAALYPDIDKYEEEEL---AF---QDEEAA 181
+++ D A++ L P + YE E + AF + EEAA
Sbjct: 285 NIKSDTTLQAIVYKLVPGL--YERELMRKRAFYKDRPEEAA 323
>gi|426367059|ref|XP_004050554.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21 [Gorilla gorilla
gorilla]
Length = 475
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+L+ + +EV CPICL + ++ EC H FC+ECI + + G + CP CR
Sbjct: 6 RLTMMWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKGGGSVCPVCR 55
>gi|426253031|ref|XP_004020205.1| PREDICTED: polycomb group RING finger protein 6 isoform 2 [Ovis
aries]
Length = 277
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 116 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 174
>gi|62897017|dbj|BAD96449.1| tripartite motif protein 31 isoform alpha variant [Homo sapiens]
Length = 425
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA--MRLGNNECPACRTHCASRRS 147
++ +++EV CPICL I++K T+ +C H FC +CI + G +CP C+T S
Sbjct: 7 VNKLQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKT------S 59
Query: 148 LRDD-LNYDALIAALYPDIDKYEEEELAFQDEEAA 181
+R + + +++L+ L I + E+ + +EA
Sbjct: 60 VRKNAIRFNSLLRNLVEKIQALQASEVQSKRKEAT 94
>gi|126272969|ref|XP_001367374.1| PREDICTED: polycomb group RING finger protein 5-like [Monodelphis
domestica]
Length = 255
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERETEFWKKNK 102
>gi|328781291|ref|XP_003249954.1| PREDICTED: hypothetical protein LOC100576640 [Apis mellifera]
Length = 1727
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 90 LSDIRKEVQCPICLGIIR-KTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCA-SRRS 147
+ +I+K +QC ICL I +TV C HRFCR CI ++ N CP C +CA RR+
Sbjct: 15 IKNIQKCLQCTICLQTISDPVKTV--CGHRFCRICIQTVIQNKNALCPLC--NCAIQRRN 70
Query: 148 LRDDLNYDALIAAL 161
+ D N I L
Sbjct: 71 ISKDKNTAIYITQL 84
>gi|21425584|emb|CAD33944.1| BMI1-like protein [Mus musculus]
gi|187955404|gb|AAI47683.1| Predicted gene, ENSMUSG00000043661 [Mus musculus]
gi|187956799|gb|AAI47696.1| Predicted gene, ENSMUSG00000043661 [Mus musculus]
Length = 194
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 87 IVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR--THCA- 143
++ LS + + C IC G + T+ ECLH FC+ CI K +N CP C H A
Sbjct: 73 LIPLSQMIPYISCFICKGYLIDAATITECLHSFCKSCIVKHFE-HSNRCPKCNLIVHQAK 131
Query: 144 SRRSLRDDLNYDALIAALYPDIDKYEEEE 172
++LR D +++ L +++ E+++
Sbjct: 132 PHKNLRMDPQLQSIVYKLVAGLEENEKKQ 160
>gi|30584893|gb|AAP36702.1| Homo sapiens tripartite motif-containing 31 [synthetic construct]
gi|61370435|gb|AAX43495.1| tripartite motif-containing 31 [synthetic construct]
Length = 426
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA--MRLGNNECPACRTHCASRRS 147
++ +++EV CPICL I++K T+ +C H FC +CI + G +CP C+T S
Sbjct: 7 VNKLQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKT------S 59
Query: 148 LRDD-LNYDALIAALYPDIDKYEEEELAFQDEEAA 181
+R + + +++L+ L I + E+ + +EA
Sbjct: 60 VRKNAIRFNSLLRNLVEKIQALQASEVQSKRKEAT 94
>gi|291873|gb|AAA19873.1| putative [Homo sapiens]
gi|371929009|gb|AEX59150.1| polycomb ring finger protein [Sus scrofa]
Length = 326
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|301118270|ref|XP_002906863.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108212|gb|EEY66264.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 830
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 40 TLQRDHSNNLEEQQPPQDSTPAAAADVDGNESDRSRSSGD---GEKDEFVIVKLSDIRKE 96
T ++ H +E+Q P + +D E + GE + +L D++K
Sbjct: 715 TAEKSHQQLQQEKQKPCEECETQRKKIDEMERKLQHAKSTPSTGELTDLERFELRDLQKL 774
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
V C +C RK + +C H FC+ECI+ ++ N +CP C+
Sbjct: 775 VNCSVCQDR-RKDVLISKCSHMFCKECIENNLKSRNRKCPTCK 816
>gi|225718860|gb|ACO15276.1| Polycomb group RING finger protein 3 [Caligus clemensi]
Length = 230
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
++L DI + + C IC G + TV ECLH FC+ CI K + +N CP C
Sbjct: 8 IELRDINEMITCKICQGYLIDATTVTECLHTFCKSCIVKHLE-DSNTCPEC 57
>gi|147844369|emb|CAN82106.1| hypothetical protein VITISV_006024 [Vitis vinifera]
Length = 662
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRT 140
+ V V+ I + CP+C ++++ T+ CLH FCR+CI + +L + E CP C
Sbjct: 4 QVVKVRRETIAACMTCPLCNKLLKEATTISLCLHTFCRKCIYE--KLSDEEVDCCPVCNI 61
Query: 141 H--CASRRSLRDDLNYDALIAALYP 163
C LR D N + A ++P
Sbjct: 62 DLGCVPVDKLRPDHNLQDIRAKIFP 86
>gi|440893076|gb|ELR45987.1| E3 ubiquitin-protein ligase TRIM21, partial [Bos grunniens mutus]
Length = 481
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTH 141
V L+ + +EV C ICL + + ++ EC H FC+ECI + + G + CP CR H
Sbjct: 17 VPLTMMWEEVTCSICLDPMVEPMSI-ECGHSFCQECISEVGKEGGSVCPVCRRH 69
>gi|54695768|gb|AAV38256.1| B lymphoma Mo-MLV insertion region (mouse) [synthetic construct]
gi|61366456|gb|AAX42862.1| B lymphoma Mo-MLV insertion region [synthetic construct]
Length = 327
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|84000133|ref|NP_001033161.1| polycomb complex protein BMI-1 [Bos taurus]
gi|122138672|sp|Q32KX7.1|BMI1_BOVIN RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|81674800|gb|AAI09872.1| BMI1 polycomb ring finger oncogene [Bos taurus]
gi|296481449|tpg|DAA23564.1| TPA: polycomb complex protein BMI-1 [Bos taurus]
gi|440901143|gb|ELR52137.1| Polycomb complex protein BMI-1 [Bos grunniens mutus]
Length = 326
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|160333720|ref|NP_001103855.1| uncharacterized protein LOC560122 [Danio rerio]
gi|159155619|gb|AAI54546.1| Si:ch211-106h11.4 protein [Danio rerio]
gi|169154011|emb|CAQ13701.1| novel protein [Danio rerio]
Length = 455
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMRLGN-NECPACRTHCASRRSLRDD 151
CPIC I K V+ C H FCREC+ + R + ECP CR RRS RDD
Sbjct: 11 CPICHEIF-KDPVVLSCSHSFCRECLQQYWRAADIQECPVCR-----RRSSRDD 58
>gi|417409780|gb|JAA51381.1| Putative locus-specific chromosome binding protein, partial
[Desmodus rotundus]
Length = 332
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 13 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 71
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 72 LLNIRSDKTLQDIVYKLVPGLFKNE 96
>gi|351709698|gb|EHB12617.1| Polycomb complex protein BMI-1 [Heterocephalus glaber]
Length = 326
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|329663653|ref|NP_001192549.1| polycomb group RING finger protein 6 [Bos taurus]
gi|296472801|tpg|DAA14916.1| TPA: Polycomb group ring finger 6-like isoform 2 [Bos taurus]
Length = 351
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 115 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 173
>gi|432091651|gb|ELK24672.1| Tripartite motif-containing protein 60 [Myotis davidii]
Length = 457
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMR--LGNNECPACRTHCASRRS 147
L++++ E CPICL +R T+ EC H FC CI + G CPAC HC +
Sbjct: 7 LAELQAEASCPICLDYLRDPVTI-ECGHTFCHSCIHQRWEDLPGTFPCPACLYHCPDKNL 65
Query: 148 LRD 150
R+
Sbjct: 66 KRN 68
>gi|16877522|gb|AAH17017.1| Tripartite motif-containing 31 [Homo sapiens]
gi|30582189|gb|AAP35321.1| tripartite motif-containing 31 [Homo sapiens]
gi|61360717|gb|AAX41911.1| tripartite motif-containing 31 [synthetic construct]
gi|61360720|gb|AAX41912.1| tripartite motif-containing 31 [synthetic construct]
gi|123995881|gb|ABM85542.1| tripartite motif-containing 31 [synthetic construct]
Length = 425
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA--MRLGNNECPACRTHCASRRS 147
++ +++EV CPICL I++K T+ +C H FC +CI + G +CP C+T S
Sbjct: 7 VNKLQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKT------S 59
Query: 148 LRDD-LNYDALIAALYPDIDKYEEEELAFQDEEAA 181
+R + + +++L+ L I + E+ + +EA
Sbjct: 60 VRKNAIRFNSLLRNLVEKIQALQASEVQSKRKEAT 94
>gi|46559391|ref|NP_031578.2| polycomb complex protein BMI-1 [Mus musculus]
gi|115066|sp|P25916.1|BMI1_MOUSE RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|192201|gb|AAA37299.1| zinc finger protein [Mus musculus]
gi|192203|gb|AAA37300.1| bmi-1 [Mus musculus]
gi|31565373|gb|AAH53708.1| Bmi1 polycomb ring finger oncogene [Mus musculus]
gi|38614119|gb|AAH56384.1| Bmi1 polycomb ring finger oncogene [Mus musculus]
gi|84872481|gb|ABC67286.1| PCGF4 [Mus musculus]
gi|148676156|gb|EDL08103.1| mCG9550, isoform CRA_a [Mus musculus]
gi|148676157|gb|EDL08104.1| mCG9550, isoform CRA_a [Mus musculus]
gi|148676159|gb|EDL08106.1| mCG9550, isoform CRA_a [Mus musculus]
Length = 324
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|344249026|gb|EGW05130.1| Polycomb complex protein BMI-1 [Cricetulus griseus]
Length = 324
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|328868096|gb|EGG16476.1| hypothetical protein DFA_09014 [Dictyostelium fasciculatum]
Length = 396
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 68 GNESDRSRSSGDGE--KDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECID 125
G D S SSGD E ++ + +S + +++QCP+CL ++++ ++ CLH FC C+
Sbjct: 24 GKNDDISDSSGDEEYRHNKSLFKFISTLSRDLQCPVCLDLLKRP-LMLSCLHSFCTSCLP 82
Query: 126 KAMRLGNNECPACR 139
+ + CP CR
Sbjct: 83 ELNINQSITCPVCR 96
>gi|326500362|dbj|BAK06270.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 985
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLR 149
L + +E++CPICL ++R +V C H FC +C+ ++M+ ++ CP C+ RR +R
Sbjct: 7 LERMGRELKCPICLSLLRSAVSVT-CNHIFCSDCLMESMK-SSSSCPVCKVP-FRRREIR 63
Query: 150 DDLNYDALIAAL 161
+ D L+ L
Sbjct: 64 PAPHMDNLVGIL 75
>gi|395828157|ref|XP_003787252.1| PREDICTED: polycomb group RING finger protein 6 [Otolemur
garnettii]
Length = 351
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 115 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 173
>gi|224066301|ref|XP_002302072.1| predicted protein [Populus trichocarpa]
gi|222843798|gb|EEE81345.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM-RLGNNECPACRTH- 141
+ V V+ I + C +C ++R T+ ECLH FCR+CI + + G + CP C +
Sbjct: 11 QVVKVRRETIAACMTCLLCNKLLRDATTISECLHTFCRKCIYRRISNEGLDSCPICNINL 70
Query: 142 -CASRRSLRDDLNYDALIAALYP-DIDKYEEEELA 174
C LR D N + + ++P K E E+A
Sbjct: 71 GCVPLEKLRPDHNLQDVRSKIFPYKKRKVEAPEVA 105
>gi|27883842|ref|NP_005171.4| polycomb complex protein BMI-1 [Homo sapiens]
gi|197098134|ref|NP_001126098.1| polycomb complex protein BMI-1 [Pongo abelii]
gi|114692354|ref|XP_001136082.1| PREDICTED: polycomb complex protein BMI-1 isoform 2 [Pan
troglodytes]
gi|426364177|ref|XP_004049196.1| PREDICTED: polycomb complex protein BMI-1 [Gorilla gorilla gorilla]
gi|22258801|sp|P35226.2|BMI1_HUMAN RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4; AltName:
Full=RING finger protein 51
gi|75061773|sp|Q5R8L2.1|BMI1_PONAB RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|15341688|gb|AAH11652.1| BMI1 polycomb ring finger oncogene [Homo sapiens]
gi|55730352|emb|CAH91898.1| hypothetical protein [Pongo abelii]
gi|60814344|gb|AAX36297.1| B lymphoma Mo-MLV insertion region [synthetic construct]
gi|119606554|gb|EAW86148.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|119606556|gb|EAW86150.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|119606557|gb|EAW86151.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|119606560|gb|EAW86154.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|189053794|dbj|BAG36046.1| unnamed protein product [Homo sapiens]
gi|208965886|dbj|BAG72957.1| BMI1 polycomb ring finger oncogene [synthetic construct]
gi|355782688|gb|EHH64609.1| Polycomb group RING finger protein 4 [Macaca fascicularis]
gi|431917704|gb|ELK16969.1| Polycomb complex protein BMI-1 [Pteropus alecto]
Length = 326
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|60654235|gb|AAX29810.1| B lymphoma Mo-MLV insertion region [synthetic construct]
Length = 327
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|432108191|gb|ELK33111.1| Polycomb complex protein BMI-1 [Myotis davidii]
Length = 326
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|62865604|ref|NP_008959.3| E3 ubiquitin-protein ligase TRIM31 [Homo sapiens]
gi|68068082|sp|Q9BZY9.2|TRI31_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM31; AltName:
Full=Tripartite motif-containing protein 31
gi|86197929|dbj|BAE78603.1| tripartite motif-containing 31 [Homo sapiens]
gi|123231709|emb|CAM26290.1| tripartite motif-containing 31 [Homo sapiens]
gi|158261563|dbj|BAF82959.1| unnamed protein product [Homo sapiens]
gi|261859140|dbj|BAI46092.1| tripartite motif-containing 31 [synthetic construct]
Length = 425
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA--MRLGNNECPACRTHCASRRS 147
++ +++EV CPICL I++K T+ +C H FC +CI + G +CP C+T S
Sbjct: 7 VNKLQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKT------S 59
Query: 148 LRDD-LNYDALIAALYPDIDKYEEEELAFQDEEAA 181
+R + + +++L+ L I + E+ + +EA
Sbjct: 60 VRKNAIRFNSLLRNLVEKIQALQASEVQSKRKEAT 94
>gi|48145939|emb|CAG33192.1| COMMD3 [Homo sapiens]
Length = 326
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|296472800|tpg|DAA14915.1| TPA: Polycomb group ring finger 6-like isoform 1 [Bos taurus]
Length = 276
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 115 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 173
>gi|157819305|ref|NP_001100838.1| BMI1 polycomb ring finger oncogene [Rattus norvegicus]
gi|149021165|gb|EDL78772.1| polycomb group ring finger 4 (predicted) [Rattus norvegicus]
gi|195540247|gb|AAI68209.1| Bmi1 protein [Rattus norvegicus]
Length = 324
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|73948737|ref|XP_858578.1| PREDICTED: polycomb complex protein BMI-1 isoform 3 [Canis lupus
familiaris]
gi|301754703|ref|XP_002913196.1| PREDICTED: polycomb complex protein BMI-1-like [Ailuropoda
melanoleuca]
gi|281350791|gb|EFB26375.1| hypothetical protein PANDA_000973 [Ailuropoda melanoleuca]
Length = 326
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|56422971|gb|AAV90800.1| recombination activating gene 1, partial [Eublepharis turcmenicus]
Length = 962
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR---RS 147
+D K + C IC I+ C H FCR CI K +++ + CPACR C
Sbjct: 243 ADFVKSISCQICEHILADP-VETTCKHLFCRLCILKCLKVIGSYCPACRYPCFPTDLVNP 301
Query: 148 LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQ 185
+R L+ + +A P D YEE L + + +KQ
Sbjct: 302 VRSFLSILSTLAVRCPVKDCYEEVSLGKYNHHLSTHKQ 339
>gi|54695770|gb|AAV38257.1| B lymphoma Mo-MLV insertion region (mouse) [Homo sapiens]
Length = 326
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|68163489|ref|NP_001020133.1| polycomb complex protein BMI-1 [Felis catus]
gi|22256724|sp|Q9TST0.1|BMI1_FELCA RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|6012977|emb|CAB57313.1| Bmi-1 protein [Felis catus]
Length = 326
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|113681968|ref|NP_001038474.1| uncharacterized protein LOC563088 [Danio rerio]
Length = 453
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN-ECPACRTHCASRRSLRDD 151
CP+C I KT ++ C H FC+EC+ + ++ N ECP CR RRS ++D
Sbjct: 11 CPVCQDIF-KTPVILSCSHSFCKECLQQFWKIKNTQECPVCR-----RRSSKED 58
>gi|119623664|gb|EAX03259.1| tripartite motif-containing 31, isoform CRA_c [Homo sapiens]
Length = 425
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA--MRLGNNECPACRTHCASRRS 147
++ +++EV CPICL I++K T+ +C H FC +CI + G +CP C+T S
Sbjct: 7 VNKLQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKT------S 59
Query: 148 LRDD-LNYDALIAALYPDIDKYEEEELAFQDEEAA 181
+R + + +++L+ L I + E+ + +EA
Sbjct: 60 VRKNAIRFNSLLRNLVEKIQALQASEVQSKRKEAT 94
>gi|291190418|ref|NP_001167259.1| E3 ubiquitin-protein ligase RNF8 [Salmo salar]
gi|223648922|gb|ACN11219.1| E3 ubiquitin-protein ligase RNF8 [Salmo salar]
Length = 475
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 65 DVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECI 124
+V E +R+R+ +K+E V + E+QC IC + K T + C H FC CI
Sbjct: 362 EVTKEEKERART----QKEEVVTQMTEVLENELQCIICSELFIKAVT-LNCAHSFCLHCI 416
Query: 125 DKAMRLGNNECPACRTHCASRR-SLRDDLNYDALIAALYPDIDK 167
+ R +ECP CR S+ SL D D ++ L PD+ +
Sbjct: 417 SE-WRKRKDECPICRQAILSQTCSLVLDNCIDRMVEQLTPDMKQ 459
>gi|76154957|gb|AAX26344.2| SJCHGC05730 protein [Schistosoma japonicum]
Length = 337
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
DEF++ ++ D ++++ CP C I RK + +C H FC C+ N +CP C
Sbjct: 268 DEFLLAEIQDYKEQLTCPTC-KINRKDAILTKCFHVFCLNCLKVRYETRNRKCPKC 322
>gi|321455745|gb|EFX66870.1| hypothetical protein DAPPUDRAFT_302409 [Daphnia pulex]
Length = 919
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
++++ + + C +C G + T++ECLH FC+ CI + + N CP C +
Sbjct: 7 LQITKLNPHLTCLLCGGYYIEATTIIECLHSFCKSCIVRYLET-NKFCPVCEVQVHKTKP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + ++E
Sbjct: 66 LLNIRSDQTLQDIVYKLVPGLFQHE 90
>gi|195426449|ref|XP_002061347.1| GK20868 [Drosophila willistoni]
gi|194157432|gb|EDW72333.1| GK20868 [Drosophila willistoni]
Length = 1574
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC-ASRR 146
V L+ + + C +C G + T++ECLH FC C+ +R CP C ++
Sbjct: 231 VLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLR-KERYCPRCEMVINNAKP 289
Query: 147 SLRDDLNYDALIAALYPDIDKYEEEEL---AF---QDEEAA 181
+++ D A++ L P + YE E + AF + EEAA
Sbjct: 290 NIKSDTTLQAIVYKLVPGL--YERELMRKRAFYKDRPEEAA 328
>gi|449019079|dbj|BAM82481.1| probable DNA repair protein RAD5 [Cyanidioschyzon merolae strain
10D]
Length = 1126
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAM---RLGNNECPACRTHCA 143
CPICL I + C H FCR+CI + R GN +CP CR C+
Sbjct: 848 CPICLESIDDAVALRNCAHVFCRDCILTLLLSNRHGNAQCPVCRKGCS 895
>gi|357111109|ref|XP_003557357.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Brachypodium
distachyon]
Length = 390
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRTH- 141
V VK S + + CP+C ++R T+ ECLH FCR+CI + N E CP C
Sbjct: 36 VRVKRSALVACLTCPLCRRLLRDAATITECLHTFCRKCISE--EFINKEVCRCPTCNIDL 93
Query: 142 -CASRRSLRDDLNYDALIAALYP 163
CA LR D + + + ++P
Sbjct: 94 GCAPEEKLRVDHSLLYVRSKIFP 116
>gi|431920375|gb|ELK18407.1| Polycomb group RING finger protein 1 [Pteropus alecto]
Length = 272
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 69 NESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM 128
NE + G E V VK+ D+ + + C +C G T+ ECLH FC+ CI K +
Sbjct: 30 NEVQGRQGYCRGRLAEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYL 89
Query: 129 RLGNNECPAC 138
+ + CP C
Sbjct: 90 Q-TSKYCPMC 98
>gi|195485148|ref|XP_002090969.1| GE13404 [Drosophila yakuba]
gi|194177070|gb|EDW90681.1| GE13404 [Drosophila yakuba]
Length = 1574
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC-ASRR 146
V L+ + + C +C G + T++ECLH FC C+ +R CP C ++
Sbjct: 231 VLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLR-KERFCPRCEMVINNAKP 289
Query: 147 SLRDDLNYDALIAALYPDIDKYEEEEL---AF---QDEEAA 181
+++ D A++ L P + YE E + AF + EEAA
Sbjct: 290 NIKSDTTLQAIVYKLVPGL--YERELMRKRAFYKDRPEEAA 328
>gi|431919132|gb|ELK17884.1| 52 kDa Ro protein [Pteropus alecto]
Length = 471
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
L+ + +EV CPICL + ++ EC H FC ECI + + G N CP CR
Sbjct: 7 LAMMWEEVTCPICLDPTVEPVSI-ECGHSFCHECISQVGKDGGNYCPVCR 55
>gi|89271831|emb|CAJ82238.1| novel protein similar to brca1 [Xenopus (Silurana) tropicalis]
Length = 548
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM---RLGNNECPACRTHCASRR 146
+S ++K ++CPICL ++++ +C H FC+ C+ + + + N CP C+T +RR
Sbjct: 10 ISVMQKNLECPICLELMKEP-VATKCDHIFCKFCMLQLLSKKKKENVPCPLCKTE-VTRR 67
Query: 147 SLRDDLNYDALIAALYPDIDKYE 169
SL++ + L+ L I +E
Sbjct: 68 SLQESHRFKLLVEGLLKIIKAFE 90
>gi|260827951|ref|XP_002608927.1| hypothetical protein BRAFLDRAFT_85508 [Branchiostoma floridae]
gi|229294281|gb|EEN64937.1| hypothetical protein BRAFLDRAFT_85508 [Branchiostoma floridae]
Length = 217
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
++L D+ + C +C G + T+ ECLH FC+ CI + + NN+CP C+
Sbjct: 6 IRLLDVNPHITCMLCKGYLVDATTITECLHTFCKSCIVQYLE-ENNDCPTCK 56
>gi|119570032|gb|EAW49647.1| polycomb group ring finger 6, isoform CRA_a [Homo sapiens]
Length = 250
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 14 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 72
>gi|119570036|gb|EAW49651.1| polycomb group ring finger 6, isoform CRA_e [Homo sapiens]
Length = 218
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 114 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 172
>gi|301756214|ref|XP_002913942.1| PREDICTED: polycomb group RING finger protein 6-like, partial
[Ailuropoda melanoleuca]
Length = 297
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 61 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 119
>gi|355709615|gb|AES03651.1| polycomb group ring finger 5 [Mustela putorius furo]
Length = 108
Score = 48.9 bits (115), Expect = 0.006, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|176866361|ref|NP_001116534.1| uncharacterized protein LOC100144568 [Danio rerio]
Length = 441
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 89 KLSDIRKEVQCPICLGIIR--KTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
K SD K+ CPICL I+ ++ + +C HRFC++C+D A +L CP C
Sbjct: 249 KTSDQAKDETCPICLETIKMPESTVLTKCQHRFCKDCLDTAFQL-KPACPIC 299
>gi|403259945|ref|XP_003922452.1| PREDICTED: polycomb group RING finger protein 5 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403259947|ref|XP_003922453.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 253
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|387017720|gb|AFJ50978.1| Polycomb complex protein BMI-1-like [Crotalus adamanteus]
Length = 327
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C IC G T++ECLH FC+ CI + + CP C R
Sbjct: 7 IKITELNPHLMCVICGGYFIDATTIIECLHSFCKTCIVHYLE-SSKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|145516643|ref|XP_001444210.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411621|emb|CAK76813.1| unnamed protein product [Paramecium tetraurelia]
Length = 432
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 24/44 (54%)
Query: 96 EVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
EV CPIC II R EC FC CI+K + N +CP CR
Sbjct: 76 EVICPICCQIIVNPRVCKECDQSFCGRCIEKWFQNSNQQCPCCR 119
>gi|8358|emb|CAA41965.1| posterior sex combs [Drosophila melanogaster]
Length = 1603
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC-ASRR 146
V L+ + + C +C G + T++ECLH FC C+ +R CP C ++
Sbjct: 254 VLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLR-KERFCPRCEMVINNAKP 312
Query: 147 SLRDDLNYDALIAALYPDIDKYEEEEL---AF---QDEEAA 181
+++ D A++ L P + YE E + AF + EEAA
Sbjct: 313 NIKSDTTLQAIVYKLVPGL--YERELMRKRAFYKDRPEEAA 351
>gi|334348830|ref|XP_001367832.2| PREDICTED: polycomb complex protein BMI-1-like [Monodelphis
domestica]
Length = 589
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 270 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 328
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 329 LLNIRSDKTLQDIVYKLVPGLFKNE 353
>gi|351710204|gb|EHB13123.1| Polycomb group RING finger protein 5 [Heterocephalus glaber]
Length = 255
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|326916688|ref|XP_003204637.1| PREDICTED: tripartite motif-containing protein 35-like [Meleagris
gallopavo]
Length = 384
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 55 PQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVME 114
P S+PA+A + + N S ++ V + ++E+ CPIC R+ T+
Sbjct: 24 PSASSPASAMENEANSPSSSLAT-------LVSPSTAPFKEELLCPICYEPFREAVTLC- 75
Query: 115 CLHRFCRECIDKAMRLGNNECPACR 139
C H FC+ CI ++ N+ CP C+
Sbjct: 76 CGHNFCKGCISRSWEHRNHACPICK 100
>gi|53794093|gb|AAU93634.1| breast and ovarian cancer susceptibility protein [Homo sapiens]
Length = 1841
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|301763803|ref|XP_002917339.1| PREDICTED: polycomb group RING finger protein 5-like [Ailuropoda
melanoleuca]
gi|410975675|ref|XP_003994256.1| PREDICTED: polycomb group RING finger protein 5 [Felis catus]
Length = 256
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|296220747|ref|XP_002756439.1| PREDICTED: polycomb group RING finger protein 5 isoform 2
[Callithrix jacchus]
Length = 253
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|281338533|gb|EFB14117.1| hypothetical protein PANDA_005532 [Ailuropoda melanoleuca]
Length = 224
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|50749508|ref|XP_421668.1| PREDICTED: polycomb group RING finger protein 5 [Gallus gallus]
Length = 256
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELQREIEFWKKNK 102
>gi|344274969|ref|XP_003409287.1| PREDICTED: polycomb group RING finger protein 5-like [Loxodonta
africana]
Length = 256
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|291404424|ref|XP_002718426.1| PREDICTED: polycomb group ring finger 5 [Oryctolagus cuniculus]
Length = 278
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|118367192|ref|XP_001016811.1| DNA-binding protein Mel-18, RING finger protein [Tetrahymena
thermophila]
gi|89298578|gb|EAR96566.1| DNA-binding protein Mel-18, RING finger protein [Tetrahymena
thermophila SB210]
Length = 447
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 14/102 (13%)
Query: 81 EKDEFVIVK---LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN---- 133
E+D+F+ K L+ + + C IC G R T+ EC H FC+ CI + N
Sbjct: 14 EQDQFLEKKRFPLNLLNSFLVCGICDGYFRFAHTITECGHTFCKICIHDYISKNQNTKNK 73
Query: 134 -ECPACR----THCASRRSLRDDLNYDALIAALYPDIDKYEE 170
+CP+C+ H + +S+R D ++ LYP K E+
Sbjct: 74 RKCPSCKGELEIHLS--KSIRKDPYKQQMVDFLYPQFAKQEQ 113
>gi|297661171|ref|XP_002809149.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 isoform 2 [Pongo
abelii]
Length = 461
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA--MRLGNNECPACRTHCASRRS 147
++ +++EV CPICL I++K T+ +C H FC +CI + G +CP C+T S
Sbjct: 7 VNKLQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKT------S 59
Query: 148 LRDD-LNYDALIAALYPDIDKYEEEEL 173
+R + + +++L+ L +I + E+
Sbjct: 60 VRKNAIRFNSLLRNLVENIQALQASEV 86
>gi|74208829|dbj|BAE21174.1| unnamed protein product [Mus musculus]
Length = 281
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 78 GDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPA 137
D E +E ++ L ++ + C IC G + T+ ECLH FC+ CI + +N CP
Sbjct: 116 ADSEDEEERLINLVELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPK 174
Query: 138 C 138
C
Sbjct: 175 C 175
>gi|24653251|ref|NP_523725.2| posterior sex combs [Drosophila melanogaster]
gi|76803812|sp|P35820.2|PSC_DROME RecName: Full=Polycomb group protein Psc; AltName: Full=Protein
posterior sex combs
gi|7303376|gb|AAF58434.1| posterior sex combs [Drosophila melanogaster]
gi|71043368|gb|AAZ20646.1| posterior sex combs [Drosophila melanogaster]
gi|269914199|gb|ACZ52619.1| MIP14548p [Drosophila melanogaster]
Length = 1601
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC-ASRR 146
V L+ + + C +C G + T++ECLH FC C+ +R CP C ++
Sbjct: 252 VLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLR-KERFCPRCEMVINNAKP 310
Query: 147 SLRDDLNYDALIAALYPDIDKYEEEEL---AF---QDEEAA 181
+++ D A++ L P + YE E + AF + EEAA
Sbjct: 311 NIKSDTTLQAIVYKLVPGL--YERELMRKRAFYKDRPEEAA 349
>gi|417397932|gb|JAA45999.1| Putative polycomb group ring finger protein 5 [Desmodus rotundus]
Length = 256
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELQRESEFWKKNK 102
>gi|348553186|ref|XP_003462408.1| PREDICTED: polycomb group RING finger protein 5-like [Cavia
porcellus]
Length = 255
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|335773371|gb|AEH58370.1| polycomb group RING finger protein 5-like protein [Equus caballus]
Length = 256
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|355689986|gb|AER99010.1| RAC/CDC42 exchange factor isoform 1 [Mustela putorius furo]
Length = 686
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E CPICLG I+ +T+ +C H FC CI +A+++ CP C
Sbjct: 5 QESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC 47
>gi|332260951|ref|XP_003279544.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Nomascus leucogenys]
gi|441677725|ref|XP_004092761.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Nomascus leucogenys]
Length = 1863
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|237681119|ref|NP_009231.2| breast cancer type 1 susceptibility protein isoform 2 [Homo
sapiens]
Length = 1884
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|147906248|ref|NP_001084738.1| uncharacterized protein LOC414708 [Xenopus laevis]
gi|46329615|gb|AAH68930.1| MGC83173 protein [Xenopus laevis]
Length = 317
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + + CP C + R
Sbjct: 7 IKMTELNPHLMCALCGGYFIDAATIVECLHSFCKTCILRYLE-AHKFCPMCDSQVHKGRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYE 169
S+R D ++ L P + + E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFRGE 90
>gi|332260953|ref|XP_003279545.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Nomascus leucogenys]
gi|441677731|ref|XP_004092762.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Nomascus leucogenys]
Length = 1884
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|440897766|gb|ELR49390.1| Polycomb group RING finger protein 5 [Bos grunniens mutus]
Length = 256
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|75875129|gb|ABA29229.1| breast cancer 1 early onset [Homo sapiens]
gi|94315232|gb|ABF14462.1| early onset breast cancer 1 [Homo sapiens]
Length = 1822
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|397465878|ref|XP_003804705.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21 [Pan paniscus]
Length = 475
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
L+ + +EV CPICL + ++ EC H FC+ECI + + G + CP CR
Sbjct: 7 LTMMWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKGGGSVCPVCR 55
>gi|149412168|ref|XP_001511592.1| PREDICTED: polycomb complex protein BMI-1-like [Ornithorhynchus
anatinus]
Length = 326
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|426252775|ref|XP_004020078.1| PREDICTED: polycomb group RING finger protein 5 [Ovis aries]
Length = 256
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|397485727|ref|XP_003813992.1| PREDICTED: breast cancer type 1 susceptibility protein homolog [Pan
paniscus]
Length = 1849
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|189441945|gb|AAI67306.1| polycomb group ring finger 1 [Xenopus (Silurana) tropicalis]
Length = 249
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ ++ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 19 EEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKYCPLC 73
>gi|92097996|gb|AAI15264.1| Zgc:136778 [Danio rerio]
Length = 457
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 87 IVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN-ECPACRTHCASR 145
+ L+D +E+ CP+C I R ++ C H C+EC+ + R ECP CR R
Sbjct: 1 MASLNDSEEELSCPVCCEIFRNP-VLLSCSHSVCKECLQQYWRTKTTQECPVCR-----R 54
Query: 146 RSLRDD 151
RS RDD
Sbjct: 55 RSSRDD 60
>gi|344306128|ref|XP_003421741.1| PREDICTED: E3 ubiquitin-protein ligase UHRF1 [Loxodonta africana]
Length = 878
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLR 149
LS + + QC C ++ + T M C H C++C+D++ R CPACR +++
Sbjct: 800 LSTVEETFQCICCQELVFRPVTTM-CQHNVCKDCLDRSFRAQVFSCPACRCDLGRNYAMQ 858
Query: 150 DDLNYDALIAALYP 163
+ A+++ L+P
Sbjct: 859 INQPLQAVLSQLFP 872
>gi|343962543|dbj|BAK62859.1| polycomb group RING finger protein 4 [Pan troglodytes]
Length = 326
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVRVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|297701026|ref|XP_002827527.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Pongo abelii]
gi|297701028|ref|XP_002827528.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 3 [Pongo abelii]
Length = 1884
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|159484118|ref|XP_001700107.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272603|gb|EDO98401.1| predicted protein [Chlamydomonas reinhardtii]
Length = 410
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRL-GNNECPACRTHCASRRS 147
++ ++ K ++CPICL I+ + + CLH FC CI ++ G CP CR RS
Sbjct: 11 RIFELGKTLRCPICLNIMDQPAR-LPCLHYFCWGCITHNVKPRGEVVCPVCRA-----RS 64
Query: 148 LRDDLNYDALIAALYPDIDKYEEEELAF 175
R D+ D+L+A +Y + E A
Sbjct: 65 NRRDIQEDSLLATF---TQRYGQIEAAL 89
>gi|410914467|ref|XP_003970709.1| PREDICTED: polycomb group RING finger protein 1-like [Takifugu
rubripes]
Length = 261
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V +K+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 29 EEEVKIKIKDLNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 83
>gi|410358541|gb|JAA44608.1| breast cancer 1, early onset [Pan troglodytes]
Length = 1863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|410293720|gb|JAA25460.1| breast cancer 1, early onset [Pan troglodytes]
Length = 1863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|405961802|gb|EKC27547.1| ADP-ribosylation factor [Crassostrea gigas]
Length = 1098
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCA 143
++ +++ +I ++CPIC + + EC H FC CI + + N+CPAC H A
Sbjct: 171 DWSYLEMKEIDSLLRCPICYDFMHTAMILPECSHTFCSFCIRQHLS-HTNQCPAC-NHGA 228
Query: 144 SRRSLRDDLNYDALIAAL 161
+LR++ D LI
Sbjct: 229 CENNLRNNRLVDDLIVQF 246
>gi|311271618|ref|XP_003133191.1| PREDICTED: polycomb group RING finger protein 5-like [Sus scrofa]
Length = 256
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|395749084|ref|XP_003778880.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Pongo abelii]
Length = 1863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|119581341|gb|EAW60937.1| breast cancer 1, early onset, isoform CRA_k [Homo sapiens]
Length = 1496
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|119570037|gb|EAW49652.1| polycomb group ring finger 6, isoform CRA_f [Homo sapiens]
Length = 175
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 14 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 72
>gi|113374135|ref|NP_001038176.1| uncharacterized protein LOC557392 [Danio rerio]
gi|213624663|gb|AAI71409.1| Zgc:136778 [Danio rerio]
gi|213624665|gb|AAI71411.1| Zgc:136778 [Danio rerio]
Length = 460
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 87 IVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN-ECPACRTHCASR 145
+ L+D +E+ CP+C I R ++ C H C+EC+ + R ECP CR R
Sbjct: 3 MASLNDSEEELSCPVCCEIFRNP-VLLSCSHSVCKECLQQYWRTKTTQECPVCR-----R 56
Query: 146 RSLRDD 151
RS RDD
Sbjct: 57 RSSRDD 62
>gi|55976416|sp|Q6J6J0.1|BRCA1_PONPY RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|48479020|gb|AAT44834.1| breast cancer type 1 [Pongo pygmaeus]
Length = 1863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|47224771|emb|CAG00365.1| unnamed protein product [Tetraodon nigroviridis]
Length = 225
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+ L+ ++C +C G + T+ ECLH FC+ CI K +N CP C +
Sbjct: 1 IPLNQFYPYIRCGLCCGFLIDASTITECLHTFCKSCIVKHF-FYSNRCPTCSIVVHETQP 59
Query: 148 L---RDDLNYDALIAALYPDIDKYEEEEL 173
L R D ++ + P +++ E E++
Sbjct: 60 LYNIRPDRQLQDIVYKMIPFLEELEREQM 88
>gi|410908881|ref|XP_003967919.1| PREDICTED: polycomb complex protein BMI-1-like [Takifugu rubripes]
Length = 529
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C +
Sbjct: 211 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYLE-TSKYCPICDVQVHKTKP 269
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 270 LLNIRSDKTLQDIVYKLVPGLFKNE 294
>gi|113865841|ref|NP_001038958.1| breast cancer type 1 susceptibility protein homolog [Pan
troglodytes]
gi|37953275|gb|AAR04849.1| BRCA1 [Pan troglodytes]
Length = 1863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|33300663|ref|NP_115749.2| polycomb group RING finger protein 5 [Homo sapiens]
gi|375065846|ref|NP_001243478.1| polycomb group RING finger protein 5 [Homo sapiens]
gi|380036033|ref|NP_001244030.1| polycomb group RING finger protein 5 [Homo sapiens]
gi|297686995|ref|XP_002821014.1| PREDICTED: polycomb group RING finger protein 5 [Pongo abelii]
gi|332212309|ref|XP_003255263.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Nomascus
leucogenys]
gi|426365544|ref|XP_004049831.1| PREDICTED: polycomb group RING finger protein 5 isoform 1 [Gorilla
gorilla gorilla]
gi|426365546|ref|XP_004049832.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Gorilla
gorilla gorilla]
gi|441600613|ref|XP_004087624.1| PREDICTED: polycomb group RING finger protein 5 [Nomascus
leucogenys]
gi|74750353|sp|Q86SE9.1|PCGF5_HUMAN RecName: Full=Polycomb group RING finger protein 5; AltName:
Full=RING finger protein 159
gi|30353997|gb|AAH51845.1| PCGF5 protein [Homo sapiens]
gi|30722356|emb|CAD91165.1| hypothetical protein [Homo sapiens]
gi|117646070|emb|CAL38502.1| hypothetical protein [synthetic construct]
gi|119570497|gb|EAW50112.1| polycomb group ring finger 5, isoform CRA_a [Homo sapiens]
gi|119570498|gb|EAW50113.1| polycomb group ring finger 5, isoform CRA_a [Homo sapiens]
gi|221044402|dbj|BAH13878.1| unnamed protein product [Homo sapiens]
gi|261859692|dbj|BAI46368.1| polycomb group ring finger 5 [synthetic construct]
Length = 256
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|410266746|gb|JAA21339.1| breast cancer 1, early onset [Pan troglodytes]
gi|410266748|gb|JAA21340.1| breast cancer 1, early onset [Pan troglodytes]
gi|410266750|gb|JAA21341.1| breast cancer 1, early onset [Pan troglodytes]
gi|410266752|gb|JAA21342.1| breast cancer 1, early onset [Pan troglodytes]
gi|410266756|gb|JAA21344.1| breast cancer 1, early onset [Pan troglodytes]
Length = 1863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|149757062|ref|XP_001496466.1| PREDICTED: polycomb group RING finger protein 5-like [Equus
caballus]
Length = 256
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|119581328|gb|EAW60924.1| breast cancer 1, early onset, isoform CRA_c [Homo sapiens]
gi|119581340|gb|EAW60936.1| breast cancer 1, early onset, isoform CRA_c [Homo sapiens]
Length = 1598
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|109158140|pdb|2H0D|A Chain A, Structure Of A Bmi-1-Ring1b Polycomb Group Ubiquitin
Ligase Complex
Length = 97
Score = 48.5 bits (114), Expect = 0.007, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 3 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 61
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 62 LLNIRSDKTLQDIVYKLVPGLFKNE 86
>gi|12003222|gb|AAG43492.1|AF207822_1 BRCA1 [Pan troglodytes]
Length = 1863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|75874794|gb|ABA29217.1| breast cancer 1 early onset [Homo sapiens]
Length = 1863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|114631765|ref|XP_001144756.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Pan
troglodytes]
gi|332834619|ref|XP_003312724.1| PREDICTED: polycomb group RING finger protein 5 [Pan troglodytes]
Length = 256
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|61365365|gb|AAX42696.1| breast cancer 1 early onset [synthetic construct]
Length = 1864
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|6552299|ref|NP_009225.1| breast cancer type 1 susceptibility protein isoform 1 [Homo
sapiens]
gi|728984|sp|P38398.2|BRCA1_HUMAN RecName: Full=Breast cancer type 1 susceptibility protein; AltName:
Full=RING finger protein 53
gi|555932|gb|AAA73985.1| breast and ovarian cancer susceptibility [Homo sapiens]
gi|1698399|gb|AAC37594.1| BRCA1 [Homo sapiens]
gi|30039659|gb|AAP12647.1| breast cancer 1, early onset [Homo sapiens]
gi|75874527|gb|ABA29208.1| breast cancer 1 early onset [Homo sapiens]
gi|75874617|gb|ABA29211.1| breast cancer 1 early onset [Homo sapiens]
gi|75874675|gb|ABA29214.1| breast cancer 1 early onset [Homo sapiens]
gi|75874871|gb|ABA29220.1| breast cancer 1 early onset [Homo sapiens]
gi|75874961|gb|ABA29223.1| breast cancer 1 early onset [Homo sapiens]
gi|75875069|gb|ABA29226.1| breast cancer 1 early onset [Homo sapiens]
gi|168278014|dbj|BAG10985.1| breast cancer type 1 susceptibility protein [synthetic construct]
Length = 1863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|403413916|emb|CCM00616.1| predicted protein [Fibroporia radiculosa]
Length = 1012
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 98 QCPICL---GIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCAS 144
+C ICL G + R +M C H F ++C+DK +++G N CPACRT S
Sbjct: 957 RCLICLDEYGAEDEVR-LMSCRHGFHKDCVDKWLQVGRNNCPACRTKGVS 1005
>gi|355562340|gb|EHH18934.1| Polycomb group RING finger protein 4 [Macaca mulatta]
Length = 290
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|291228049|ref|XP_002733998.1| PREDICTED: lethal (3) 73Ah-like [Saccoglossus kowalevskii]
Length = 321
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC--RTH-CAS 144
VKL DI + + C +C G + T+ ECLH FC+ CI K + + CP C + H
Sbjct: 59 VKLIDINQYITCQLCGGYLVDATTITECLHTFCKSCIVKYLE-TSILCPTCDVKIHETWP 117
Query: 145 RRSLRDDLNYDALIAALYPDIDKYEE 170
S+R D ++ L P +K E+
Sbjct: 118 YYSIRLDRTMQDIVHKLLPQTEKEEK 143
>gi|195150625|ref|XP_002016251.1| GL10594 [Drosophila persimilis]
gi|194110098|gb|EDW32141.1| GL10594 [Drosophila persimilis]
Length = 1624
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC-ASRR 146
V L+ + + C +C G + T++ECLH FC C+ +R + CP C ++
Sbjct: 272 VLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLR-KDRFCPRCEMVINNAKP 330
Query: 147 SLRDDLNYDALIAALYPDIDKYEEE 171
+++ D A++ L P + YE E
Sbjct: 331 NIKSDTTLQAIVYKLVPGL--YERE 353
>gi|38503185|sp|Q9GKK8.2|BRCA1_PANTR RecName: Full=Breast cancer type 1 susceptibility protein homolog
Length = 1863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|119581338|gb|EAW60934.1| breast cancer 1, early onset, isoform CRA_j [Homo sapiens]
gi|119581345|gb|EAW60941.1| breast cancer 1, early onset, isoform CRA_j [Homo sapiens]
Length = 1822
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|119581333|gb|EAW60929.1| breast cancer 1, early onset, isoform CRA_g [Homo sapiens]
gi|119581337|gb|EAW60933.1| breast cancer 1, early onset, isoform CRA_g [Homo sapiens]
gi|119581339|gb|EAW60935.1| breast cancer 1, early onset, isoform CRA_g [Homo sapiens]
Length = 1863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|61355355|gb|AAX41131.1| breast cancer 1 early onset [synthetic construct]
Length = 1863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|353441749|gb|AEQ98814.1| breast and ovarian cancer sususceptibility protein 1 [Homo sapiens]
Length = 1863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|397510020|ref|XP_003825403.1| PREDICTED: polycomb group RING finger protein 5 isoform 1 [Pan
paniscus]
gi|397510022|ref|XP_003825404.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Pan
paniscus]
gi|410226392|gb|JAA10415.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258158|gb|JAA17046.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258160|gb|JAA17047.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258162|gb|JAA17048.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258164|gb|JAA17049.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258166|gb|JAA17050.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258168|gb|JAA17051.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410304080|gb|JAA30640.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410338739|gb|JAA38316.1| polycomb group ring finger 5 [Pan troglodytes]
Length = 256
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|410210842|gb|JAA02640.1| breast cancer 1, early onset [Pan troglodytes]
Length = 1863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|326497399|dbj|BAK05789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 280
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 12/126 (9%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE-CPACRTH--CASRRSLRDDLN 153
V CP+C G R+ EC H FCRECI K + E CP C LR D++
Sbjct: 19 VTCPLCRGYFREASAFSECGHTFCRECIMKKIDEEEIEACPVCDVALGITPEEKLRADIS 78
Query: 154 YDALIAALYP---DIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRKRTPKST 210
A+ L+P ++D E + + R+ I + Q+ GR+ T
Sbjct: 79 IQAIRNNLFPPKSEVDAVEAPTITLPAKRKERSISSLVEIPKV-ATQSTLTGRR-----T 132
Query: 211 SALRRS 216
A RR+
Sbjct: 133 KAARRT 138
>gi|281352081|gb|EFB27665.1| hypothetical protein PANDA_001793 [Ailuropoda melanoleuca]
Length = 288
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 63 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 121
>gi|346716206|ref|NP_001039912.2| polycomb group RING finger protein 1 [Bos taurus]
gi|223590123|sp|Q2YDF9.2|PCGF1_BOVIN RecName: Full=Polycomb group RING finger protein 1
Length = 259
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 31 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 85
>gi|55250220|gb|AAH85615.1| BRCA1 protein, partial [Homo sapiens]
Length = 624
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|55742258|ref|NP_001007159.1| polycomb group RING finger protein 1 [Danio rerio]
gi|82209850|sp|Q7ZYZ7.1|PCGF1_DANRE RecName: Full=Polycomb group RING finger protein 1
gi|126631863|gb|AAI34013.1| Polycomb group ring finger 1 [Danio rerio]
Length = 261
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V +K+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 29 EEEVKIKIKDLNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 83
>gi|71043360|gb|AAZ20642.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 1450
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC-ASRR 146
V L+ + + C +C G + T++ECLH FC C+ +R CP C ++
Sbjct: 252 VLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLR-KERFCPRCEMVINNAKP 310
Query: 147 SLRDDLNYDALIAALYPDIDKYEEEEL---AF---QDEEAA 181
+++ D A++ L P + YE E + AF + EEAA
Sbjct: 311 NIKSDTTLQAIVYKLVPGL--YERELMRKRAFYKDRPEEAA 349
>gi|350529342|ref|NP_001089498.2| polycomb group RING finger protein 1 [Xenopus laevis]
gi|223590126|sp|Q4QR06.2|PCGF1_XENLA RecName: Full=Polycomb group RING finger protein 1
Length = 259
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ ++ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 29 EEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKYCPLC 83
>gi|198457431|ref|XP_001360669.2| GA17752 [Drosophila pseudoobscura pseudoobscura]
gi|198135975|gb|EAL25244.2| GA17752 [Drosophila pseudoobscura pseudoobscura]
Length = 1591
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC-ASRR 146
V L+ + + C +C G + T++ECLH FC C+ +R + CP C ++
Sbjct: 238 VLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLR-KDRFCPRCEMVINNAKP 296
Query: 147 SLRDDLNYDALIAALYPDIDKYEEE 171
+++ D A++ L P + YE E
Sbjct: 297 NIKSDTTLQAIVYKLVPGL--YERE 319
>gi|119581334|gb|EAW60930.1| breast cancer 1, early onset, isoform CRA_h [Homo sapiens]
gi|119581344|gb|EAW60940.1| breast cancer 1, early onset, isoform CRA_h [Homo sapiens]
Length = 1624
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|432104724|gb|ELK31277.1| E3 ubiquitin-protein ligase TRIM21 [Myotis davidii]
Length = 529
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
L+ + +EV CPICL + ++ EC H FC ECI + + G CP CR
Sbjct: 66 LAMMWEEVTCPICLDPTVEPVSI-ECGHSFCHECISQVAKAGGGTCPVCR 114
>gi|350529343|ref|NP_001016417.2| polycomb group RING finger protein 1 [Xenopus (Silurana)
tropicalis]
gi|123893179|sp|Q28H21.1|PCGF1_XENTR RecName: Full=Polycomb group RING finger protein 1
gi|89273860|emb|CAJ81866.1| polycomb group ring finger 1 [Xenopus (Silurana) tropicalis]
Length = 259
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ ++ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 29 EEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKYCPLC 83
>gi|340378349|ref|XP_003387690.1| PREDICTED: hypothetical protein LOC100640627 [Amphimedon
queenslandica]
Length = 1757
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 82 KDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
KDE VK + E++CP+CL I++ V C FC+ CI++ ++ N CP C
Sbjct: 1105 KDELSFVKEVPDQIEIECPVCLHILKDPHQVSCCGRNFCKSCIER-IKASNGSCPTC 1160
>gi|37537746|gb|AAQ92977.1| IRIS [Homo sapiens]
Length = 1399
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|402880924|ref|XP_003904036.1| PREDICTED: polycomb group RING finger protein 5 isoform 1 [Papio
anubis]
gi|402880926|ref|XP_003904037.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Papio
anubis]
gi|355782955|gb|EHH64876.1| hypothetical protein EGM_18205 [Macaca fascicularis]
gi|380784417|gb|AFE64084.1| polycomb group RING finger protein 5 [Macaca mulatta]
gi|380784419|gb|AFE64085.1| polycomb group RING finger protein 5 [Macaca mulatta]
gi|380784421|gb|AFE64086.1| polycomb group RING finger protein 5 [Macaca mulatta]
gi|380784423|gb|AFE64087.1| polycomb group RING finger protein 5 [Macaca mulatta]
gi|383413563|gb|AFH29995.1| polycomb group RING finger protein 5 [Macaca mulatta]
Length = 256
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|350409751|ref|XP_003488833.1| PREDICTED: hypothetical protein LOC100740095 [Bombus impatiens]
Length = 1794
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSL 148
++ +I+K +QC ICL I + + C HRFCR+CI ++ N CP C RRS+
Sbjct: 15 EIRNIQKCLQCTICLNTISEPVKTL-CGHRFCRQCIQTLLQNKNALCPLC-NRAIQRRSI 72
Query: 149 RDD 151
D
Sbjct: 73 SKD 75
>gi|317026851|ref|XP_001399658.2| hypothetical protein ANI_1_728024 [Aspergillus niger CBS 513.88]
Length = 594
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 21/118 (17%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE----------CPACR 139
L D+ KE+ C IC ++ + T+++CLH FC C+ + + CP+CR
Sbjct: 11 LGDLEKELICSICTDLLYQPLTLLDCLHTFCGSCLKEWFSAQASRARSSSSVRFTCPSCR 70
Query: 140 THCASRRSLRDDLNYDAL---IAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTF 194
A R R + L + A PD DK EE+ EE AR + S+ T
Sbjct: 71 ---AVVRETRPNATVTTLLDMVLAASPDRDKSAEEK-----EEIARRYKHGDSVFPTL 120
>gi|85701941|ref|NP_001028601.1| tripartite motif-containing protein 75 [Mus musculus]
gi|123788675|sp|Q3UWZ0.1|TRI75_MOUSE RecName: Full=Tripartite motif-containing protein 75
gi|74193642|dbj|BAE22774.1| unnamed protein product [Mus musculus]
gi|148696737|gb|EDL28684.1| mCG59146 [Mus musculus]
gi|187952177|gb|AAI39220.1| Tripartite motif-containing 75 [Mus musculus]
gi|187953157|gb|AAI39222.1| Tripartite motif-containing 75 [Mus musculus]
Length = 467
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECID--KAMRLGNNECPACRTHCASRRS 147
L+ ++KE +CPICL + TV EC H FCR CI A + + CP CR C R+
Sbjct: 7 LARLQKETKCPICLDDLTDPVTV-ECGHNFCRSCIKDFWAGQQATSSCPVCRHQC-QHRN 64
Query: 148 LRDDLNYDALI 158
LR + +I
Sbjct: 65 LRSNAQLGNMI 75
>gi|55976414|sp|Q6J6I8.1|BRCA1_GORGO RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|48479022|gb|AAT44835.1| breast cancer type 1 [Gorilla gorilla]
Length = 1863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|355709620|gb|AES03653.1| polycomb group ring finger 6 [Mustela putorius furo]
Length = 169
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + N CP C
Sbjct: 23 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR-CPKC 81
>gi|338722476|ref|XP_001498128.3| PREDICTED: tripartite motif-containing protein 75-like [Equus
caballus]
Length = 470
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASR 145
L+ ++ E CPICL +R T+ EC H FCR CI ++ R CP CR C R
Sbjct: 7 LAGLQAEANCPICLDYLRDPVTI-ECGHNFCRSCIQQSWEDRWDMFPCPVCRHPCQQR 63
>gi|260808159|ref|XP_002598875.1| hypothetical protein BRAFLDRAFT_90099 [Branchiostoma floridae]
gi|229284150|gb|EEN54887.1| hypothetical protein BRAFLDRAFT_90099 [Branchiostoma floridae]
Length = 564
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCREC---IDKAMRLGNNECPACRTHCASRRS 147
+D R+E+ C ICL + + + V+ C+H FC++C I+ A R +CP C
Sbjct: 10 TDFREELTCSICLELFTRPK-VLPCMHTFCQDCLQGINVARREMPFKCPLCHRQVKLPPQ 68
Query: 148 LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQTEALGRKRTP 207
+ L + LI L ++ ++ L+ + EE QI TEA+G+ R
Sbjct: 69 GVEGLPDNHLITTL---CERLQQVTLSGRKEETHLLSQINI--------LTEAVGKYRGK 117
Query: 208 KSTSALRRSHGRYRDT 223
+T L+ +R T
Sbjct: 118 AATPPLQTQSAVFRHT 133
>gi|149730354|ref|XP_001493775.1| PREDICTED: polycomb group RING finger protein 5-like [Equus
caballus]
Length = 258
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
L D + C IC G + K TV ECLH FC+ CI + +++CP C
Sbjct: 9 LKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSSDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|444722999|gb|ELW63671.1| Polycomb group RING finger protein 2 [Tupaia chinensis]
Length = 102
Score = 48.5 bits (114), Expect = 0.008, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T +ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGNFIDATTTVECLHSFCKTCIARYLET-NKYCPMCDVQVHKTRP 65
Query: 147 --SLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQ 187
S+R D ++ L P + F+DE R +Q
Sbjct: 66 LLSIRSDKTLRNIVYKLVPGL---------FKDEMKRRRISMQ 99
>gi|426223979|ref|XP_004006151.1| PREDICTED: polycomb group RING finger protein 1 [Ovis aries]
gi|440896445|gb|ELR48364.1| Polycomb group RING finger protein 1 [Bos grunniens mutus]
Length = 259
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 31 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 85
>gi|410266754|gb|JAA21343.1| breast cancer 1, early onset [Pan troglodytes]
Length = 760
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|223590125|sp|Q8R023.2|PCGF1_MOUSE RecName: Full=Polycomb group RING finger protein 1; AltName:
Full=Nervous system Polycomb-1; Short=NSPc1; AltName:
Full=RING finger protein 68
gi|148666640|gb|EDK99056.1| mCG133598, isoform CRA_a [Mus musculus]
gi|149036498|gb|EDL91116.1| rCG56268, isoform CRA_a [Rattus norvegicus]
Length = 259
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 31 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 85
>gi|449282985|gb|EMC89699.1| Polycomb group RING finger protein 5 [Columba livia]
Length = 256
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELQREIEFWKKNK 102
>gi|224052561|ref|XP_002188526.1| PREDICTED: polycomb group RING finger protein 5 [Taeniopygia
guttata]
Length = 256
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELQREIEFWKKNK 102
>gi|1498737|gb|AAC00049.1| Brca1-delta11b [Homo sapiens]
Length = 759
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|149727250|ref|XP_001500243.1| PREDICTED: polycomb group RING finger protein 1 [Equus caballus]
Length = 259
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 31 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 85
>gi|119623666|gb|EAX03261.1| tripartite motif-containing 31, isoform CRA_e [Homo sapiens]
Length = 349
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA--MRLGNNECPACRTHCASRRS 147
++ +++EV CPICL I++K T+ +C H FC +CI + G +CP C+T S
Sbjct: 7 VNKLQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKT------S 59
Query: 148 LRDD-LNYDALIAALYPDIDKYEEEELAFQDEEAA 181
+R + + +++L+ L I + E+ + +EA
Sbjct: 60 VRKNAIRFNSLLRNLVEKIQALQASEVQSKRKEAT 94
>gi|390371119|dbj|GAB65000.1| hypothetical protein PCYB_042020 [Plasmodium cynomolgi strain B]
Length = 296
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAM-RLGNNECPACRTHCA-SRRSLRDD--LNY 154
CPICL +I T+ C H FC C+ A+ + + CP+CRT R S + D L +
Sbjct: 172 CPICLCLIHDPVTLNSCFHSFCWNCLATAIQKYSIDNCPSCRTKIVYDRDSFKIDGILYF 231
Query: 155 DALIAALYPDIDKYEEEEL 173
D + L IDK E E++
Sbjct: 232 DDYLTVL-NSIDKNEMEDM 249
>gi|350634550|gb|EHA22912.1| hypothetical protein ASPNIDRAFT_128900 [Aspergillus niger ATCC
1015]
Length = 1376
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 21/118 (17%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE----------CPACR 139
L D+ KE+ C IC ++ + T+++CLH FC C+ + + CP+CR
Sbjct: 459 LGDLEKELICSICTDLLYQPLTLLDCLHTFCGSCLKEWFSAQASRARSSSSVRFTCPSCR 518
Query: 140 THCASRRSLRDDLNYDAL---IAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTF 194
A R R + L + A PD DK EE+ EE AR + S+ T
Sbjct: 519 ---AVVRETRPNATVTTLLDMVLAASPDRDKSAEEK-----EEIARRYKHGDSVFPTL 568
>gi|348566463|ref|XP_003469021.1| PREDICTED: polycomb group RING finger protein 1-like [Cavia
porcellus]
Length = 259
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 31 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 85
>gi|296087924|emb|CBI35207.3| unnamed protein product [Vitis vinifera]
Length = 425
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRT 140
+ V V+ I + CP+C ++++ T+ CLH FCR+CI + +L + E CP C
Sbjct: 4 QVVKVRRETIAACMTCPLCNKLLKEATTISLCLHTFCRKCIYE--KLSDEEVDCCPVCNI 61
Query: 141 H--CASRRSLRDDLNYDALIAALYP 163
C LR D N + A ++P
Sbjct: 62 DLGCVPVDKLRPDHNLQDIRAKIFP 86
>gi|225453016|ref|XP_002264002.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Vitis vinifera]
Length = 449
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRT 140
+ V V+ I + CP+C ++++ T+ CLH FCR+CI + +L + E CP C
Sbjct: 4 QVVKVRRETIAACMTCPLCNKLLKEATTISLCLHTFCRKCIYE--KLSDEEVDCCPVCNI 61
Query: 141 H--CASRRSLRDDLNYDALIAALYP 163
C LR D N + A ++P
Sbjct: 62 DLGCVPVDKLRPDHNLQDIRAKIFP 86
>gi|119581327|gb|EAW60923.1| breast cancer 1, early onset, isoform CRA_b [Homo sapiens]
gi|119581342|gb|EAW60938.1| breast cancer 1, early onset, isoform CRA_b [Homo sapiens]
Length = 721
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|119581343|gb|EAW60939.1| breast cancer 1, early onset, isoform CRA_l [Homo sapiens]
gi|119581346|gb|EAW60942.1| breast cancer 1, early onset, isoform CRA_l [Homo sapiens]
Length = 680
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|18402394|ref|NP_565702.1| E3 ubiquitin protein ligase DRIP2 [Arabidopsis thaliana]
gi|75306338|sp|Q94AY3.1|DRIP2_ARATH RecName: Full=E3 ubiquitin protein ligase DRIP2; AltName:
Full=DREB2A-interacting protein 2
gi|15010634|gb|AAK73976.1| At2g30580/T6B20.7 [Arabidopsis thaliana]
gi|20198328|gb|AAB63079.2| putative C3HC4 zinc finger protein [Arabidopsis thaliana]
gi|23308209|gb|AAN18074.1| At2g30580/T6B20.7 [Arabidopsis thaliana]
gi|330253317|gb|AEC08411.1| E3 ubiquitin protein ligase DRIP2 [Arabidopsis thaliana]
Length = 420
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 13/173 (7%)
Query: 81 EKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE-CPACR 139
E D VK + + CP+C ++R T+ ECLH FCR+CI + + E CP C
Sbjct: 2 EGDMVAKVKRETVVACMTCPLCDKLLRDATTISECLHTFCRKCIYEKITEDEIESCPVCD 61
Query: 140 THCASR--RSLRDDLNYDALIAALYPDIDKYEE--EELAFQDEEAARNKQIQASIAQTFQ 195
LR D L A L+P K E E ++ A R ++ +S+ +
Sbjct: 62 IDLGGTPLEKLRPDHILQDLRAKLFPLKRKKERAPEVVSSISLPAKRKERSISSLVVSTP 121
Query: 196 RQTEALGR--KRTPKSTSALRRSHGRYRDTPLRGRRNYRMTELQGSDENDDAN 246
R + G KRT +T R G + +R + E G D + A+
Sbjct: 122 RVSAQAGTTGKRTKAATRKDVRGSGSF------TKRTVKKEEEFGDDHVESAS 168
>gi|426348156|ref|XP_004041705.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Gorilla gorilla gorilla]
Length = 1399
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|237681123|ref|NP_009229.2| breast cancer type 1 susceptibility protein isoform 4 [Homo
sapiens]
gi|119581329|gb|EAW60925.1| breast cancer 1, early onset, isoform CRA_d [Homo sapiens]
gi|119581336|gb|EAW60932.1| breast cancer 1, early onset, isoform CRA_d [Homo sapiens]
Length = 759
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|297667281|ref|XP_002811904.1| PREDICTED: polycomb group RING finger protein 1 [Pongo abelii]
gi|332239108|ref|XP_003268747.1| PREDICTED: polycomb group RING finger protein 1 [Nomascus
leucogenys]
gi|402891319|ref|XP_003908897.1| PREDICTED: polycomb group RING finger protein 1 [Papio anubis]
gi|355565816|gb|EHH22245.1| hypothetical protein EGK_05474 [Macaca mulatta]
gi|355751439|gb|EHH55694.1| hypothetical protein EGM_04947, partial [Macaca fascicularis]
gi|380783643|gb|AFE63697.1| polycomb group RING finger protein 1 [Macaca mulatta]
gi|383411057|gb|AFH28742.1| polycomb group RING finger protein 1 [Macaca mulatta]
gi|384942650|gb|AFI34930.1| polycomb group RING finger protein 1 [Macaca mulatta]
Length = 259
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 31 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 85
>gi|291386486|ref|XP_002709762.1| PREDICTED: polycomb group ring finger 1 [Oryctolagus cuniculus]
gi|351698792|gb|EHB01711.1| Polycomb group RING finger protein 1 [Heterocephalus glaber]
Length = 259
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 31 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 85
>gi|213624162|gb|AAI70727.1| polycomb group ring finger 1 [Xenopus (Silurana) tropicalis]
gi|213625506|gb|AAI70753.1| polycomb group ring finger 1 [Xenopus (Silurana) tropicalis]
Length = 249
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ ++ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 19 EEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKYCPLC 73
>gi|395841172|ref|XP_003793420.1| PREDICTED: polycomb group RING finger protein 1 [Otolemur
garnettii]
Length = 259
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 31 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 85
>gi|109240538|ref|NP_116062.2| polycomb group RING finger protein 1 [Homo sapiens]
gi|114578279|ref|XP_515562.2| PREDICTED: polycomb group RING finger protein 1 [Pan troglodytes]
gi|397478066|ref|XP_003810379.1| PREDICTED: polycomb group RING finger protein 1 [Pan paniscus]
gi|426336056|ref|XP_004029520.1| PREDICTED: polycomb group RING finger protein 1 [Gorilla gorilla
gorilla]
gi|223590124|sp|Q9BSM1.2|PCGF1_HUMAN RecName: Full=Polycomb group RING finger protein 1; AltName:
Full=Nervous system Polycomb-1; Short=NSPc1; AltName:
Full=RING finger protein 68
gi|119620038|gb|EAW99632.1| polycomb group ring finger 1, isoform CRA_a [Homo sapiens]
gi|410217414|gb|JAA05926.1| polycomb group ring finger 1 [Pan troglodytes]
gi|410254064|gb|JAA14999.1| polycomb group ring finger 1 [Pan troglodytes]
gi|410290162|gb|JAA23681.1| polycomb group ring finger 1 [Pan troglodytes]
Length = 259
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 31 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 85
>gi|302822410|ref|XP_002992863.1| hypothetical protein SELMODRAFT_448935 [Selaginella moellendorffii]
gi|300139311|gb|EFJ06054.1| hypothetical protein SELMODRAFT_448935 [Selaginella moellendorffii]
Length = 554
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECI-DKAMRLGNNECPACRTHCAS--RRSLRDDLN 153
+ CP+C + R+ T+ ECLH FC++CI D+ N CP C + LR D
Sbjct: 24 LTCPLCGNLFREATTISECLHTFCKDCIHDRFSDEETNSCPMCNVDLGTVPLEKLRADPQ 83
Query: 154 YDALIAALY 162
D + A ++
Sbjct: 84 LDDVQAKIF 92
>gi|296223494|ref|XP_002757636.1| PREDICTED: polycomb group RING finger protein 1 [Callithrix
jacchus]
gi|403260331|ref|XP_003922629.1| PREDICTED: polycomb group RING finger protein 1 [Saimiri
boliviensis boliviensis]
Length = 259
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 31 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 85
>gi|67678255|gb|AAH97736.1| MGC115420 protein [Xenopus laevis]
Length = 249
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ ++ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 19 EEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKYCPLC 73
>gi|53690156|gb|AAU89982.1| Sjogren syndrome antigen A1 [Homo sapiens]
Length = 475
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
+L+ +EV CPICL + ++ EC H FC+ECI + + G + CP CR
Sbjct: 6 RLTMTWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKGGGSVCPVCR 55
>gi|73980955|ref|XP_532995.2| PREDICTED: polycomb group RING finger protein 1 [Canis lupus
familiaris]
gi|301772196|ref|XP_002921515.1| PREDICTED: polycomb group RING finger protein 1-like [Ailuropoda
melanoleuca]
gi|410955103|ref|XP_003984198.1| PREDICTED: polycomb group RING finger protein 1 [Felis catus]
gi|281343057|gb|EFB18641.1| hypothetical protein PANDA_010410 [Ailuropoda melanoleuca]
Length = 259
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 31 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 85
>gi|156388938|ref|XP_001634749.1| predicted protein [Nematostella vectensis]
gi|156221836|gb|EDO42686.1| predicted protein [Nematostella vectensis]
Length = 99
Score = 48.5 bits (114), Expect = 0.008, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRT---HCAS 144
VK++D+ C +C G + T+ EC+H FC+ C+ + + L N CP C
Sbjct: 3 VKVTDLNPHFICKLCNGYLINPVTITECIHTFCKSCLLRHISL-VNRCPVCNEVIHETTP 61
Query: 145 RRSLRDDLNYDALIAALYPDIDKYE 169
++R D +I ++P ++K E
Sbjct: 62 IYNIRVDRTMQDIINKIFPKLEKEE 86
>gi|28076973|ref|NP_081930.1| polycomb group RING finger protein 6 [Mus musculus]
gi|77416553|sp|Q99NA9.1|PCGF6_MOUSE RecName: Full=Polycomb group RING finger protein 6; AltName:
Full=Mel18 and Bmi1-like RING finger; AltName: Full=RING
finger protein 134
gi|13537208|dbj|BAB40780.1| mMBLR [Mus musculus]
gi|16740622|gb|AAH16195.1| Polycomb group ring finger 6 [Mus musculus]
gi|58476686|gb|AAH89460.1| Polycomb group ring finger 6 [Mus musculus]
gi|148710077|gb|EDL42023.1| polycomb group ring finger 6 [Mus musculus]
Length = 353
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 78 GDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPA 137
D E +E ++ L ++ + C IC G + T+ ECLH FC+ CI + +N CP
Sbjct: 116 ADSEDEEERLINLVELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPK 174
Query: 138 C 138
C
Sbjct: 175 C 175
>gi|169642395|gb|AAI60628.1| Si:dkey-3h3.3 protein [Danio rerio]
Length = 208
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 89 KLSDIRKEVQCPICLGIIR--KTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
K SD K+ CPICL I+ ++ + +C HRFC++C+D A +L CP C
Sbjct: 16 KTSDQAKDETCPICLETIKMPESTVLTKCQHRFCKDCLDTAFQL-KPACPIC 66
>gi|12832332|dbj|BAB22061.1| unnamed protein product [Mus musculus]
Length = 233
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELQRELEFWKKNK 102
>gi|21313116|ref|NP_083784.1| polycomb group RING finger protein 5 [Mus musculus]
gi|12857499|dbj|BAB31023.1| unnamed protein product [Mus musculus]
gi|187954253|gb|AAI39259.1| Polycomb group ring finger 5 [Mus musculus]
gi|223461108|gb|AAI39260.1| Polycomb group ring finger 5 [Mus musculus]
Length = 236
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELQRELEFWKKNK 102
>gi|410926339|ref|XP_003976636.1| PREDICTED: polycomb group RING finger protein 5-A-like [Takifugu
rubripes]
Length = 244
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 92 DIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR---RSL 148
D + C +C G + K TV ECLH FC+ CI + +N+CP C L
Sbjct: 12 DFNHFITCYLCRGYLIKPTTVTECLHTFCKSCIVQHFE-DSNDCPKCGIQVHETNPLEML 70
Query: 149 RDDLNYDALIAALYPDI-DKYEEEELAF 175
R D + +I L P + +K E++EL F
Sbjct: 71 RLDNTLEEIIFKLVPGLREKEEQDELDF 98
>gi|327274703|ref|XP_003222116.1| PREDICTED: polycomb complex protein BMI-1-like [Anolis
carolinensis]
Length = 473
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C IC G T++ECLH FC+ CI + + CP C R
Sbjct: 157 LKITELNPHLMCVICGGYFIDATTIIECLHSFCKTCIVHYLE-TSKYCPICDVQVHKTRP 215
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 216 LLNIRSDKTLQDIVYKLVPGLFKNE 240
>gi|119581326|gb|EAW60922.1| breast cancer 1, early onset, isoform CRA_a [Homo sapiens]
gi|119581330|gb|EAW60926.1| breast cancer 1, early onset, isoform CRA_a [Homo sapiens]
Length = 719
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|219518728|gb|AAI45592.1| Pcgf5 protein [Mus musculus]
Length = 255
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAF 175
LR D + +I L P + + + EL F
Sbjct: 68 MLRLDNTLEEIIFKLVPGLREQLQRELEF 96
>gi|148709823|gb|EDL41769.1| polycomb group ring finger 5, isoform CRA_b [Mus musculus]
Length = 238
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 11 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 69
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 70 MLRLDNTLEEIIFKLVPGL---REQELQRELEFWKKNK 104
>gi|193788616|ref|NP_001123354.1| polycomb group RING finger protein 5 [Rattus norvegicus]
gi|187469199|gb|AAI67067.1| Pcgf5 protein [Rattus norvegicus]
Length = 236
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELQRELEFWKKNK 102
>gi|449442949|ref|XP_004139243.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
gi|449483021|ref|XP_004156472.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
Length = 451
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRT 140
+ V VK + + CP+C ++++ T+ CLH FCR+CI + +L ++E CP C
Sbjct: 4 QVVRVKREILEACMTCPLCNKLLKEATTISLCLHTFCRKCIYE--KLSDDEVDCCPVCDI 61
Query: 141 H--CASRRSLRDDLNYDALIAALYP 163
C LR D N + A ++P
Sbjct: 62 DLGCLPVEKLRPDHNLQDIRAKIFP 86
>gi|91076158|ref|XP_971006.1| PREDICTED: similar to ring finger protein [Tribolium castaneum]
Length = 224
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+KL + + C IC G + TV ECLH FC+ C+ K + NN CP C
Sbjct: 5 IKLKTLNSHITCKICRGYLIDATTVTECLHTFCKSCLVKHLE-ENNTCPTC 54
>gi|82571652|gb|AAI10243.1| PCGF1 protein [Bos taurus]
Length = 247
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 19 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 73
>gi|156067740|gb|ABU43507.1| recombination activating protein 1, partial [Eublepharis
macularius]
Length = 346
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR---RS 147
+D K + C IC I+ C H FCR CI K +++ + CPACR C
Sbjct: 244 ADFVKSISCQICEHILADP-VETTCKHLFCRLCILKCLKVIGSYCPACRYPCFPTDLVNP 302
Query: 148 LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQ 185
+R L+ + +A P D YEE L + + +KQ
Sbjct: 303 VRSFLSILSTLAVRCPVKDCYEEVSLGKYNHHLSTHKQ 340
>gi|126332008|ref|XP_001365616.1| PREDICTED: polycomb group RING finger protein 1-like [Monodelphis
domestica]
Length = 259
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 31 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 85
>gi|118401967|ref|XP_001033303.1| SNF2 family N-terminal domain containing protein [Tetrahymena
thermophila]
gi|89287651|gb|EAR85640.1| SNF2 family N-terminal domain containing protein [Tetrahymena
thermophila SB210]
Length = 1040
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR 145
VI ++ D + +V C +CL I K ++ CLH FC C++++++ N++CP CR H
Sbjct: 748 VIQQIKDGQFQV-CSVCLEDI-KYHSISSCLHVFCSSCLEQSIQ-TNHKCPLCRKHL--- 801
Query: 146 RSLRDDLNYDALIAALYPDIDKYEEEEL 173
S+ D L++ A ++ + Y +E+
Sbjct: 802 -SMSDMLDFVDEGAVIHQQLSHYLNDEI 828
>gi|340718230|ref|XP_003397574.1| PREDICTED: hypothetical protein LOC100649216 [Bombus terrestris]
Length = 1792
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSL 148
++ +I+K +QC ICL I + + C HRFCR+CI ++ N CP C RRS+
Sbjct: 15 EIRNIQKCLQCTICLQTISEPVKTL-CGHRFCRQCIQTLLQSKNALCPLC-NRAIQRRSI 72
Query: 149 RDD 151
D
Sbjct: 73 SKD 75
>gi|33150610|gb|AAP97183.1|AF087884_1 RNF3A-2 [Homo sapiens]
Length = 238
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 78 GDG--EKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNEC 135
GDG +E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + C
Sbjct: 3 GDGGCIFEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYC 61
Query: 136 PAC 138
P C
Sbjct: 62 PMC 64
>gi|354473588|ref|XP_003499016.1| PREDICTED: polycomb group RING finger protein 5-like [Cricetulus
griseus]
Length = 329
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELQRELEFWKKNK 102
>gi|334350182|ref|XP_001371945.2| PREDICTED: hypothetical protein LOC100018904 [Monodelphis domestica]
Length = 2255
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR---THCASRRSLRDDLNYD 155
CP+C+ + + T C H FC +C+++++ N +CP C+ C S R +L +
Sbjct: 1822 CPLCMRLFYEPVTT-PCGHTFCMKCLERSLD-HNPKCPLCKEGLAECVSVRKCSKNLLME 1879
Query: 156 ALIAALYPD 164
A+IA PD
Sbjct: 1880 AMIAKYLPD 1888
>gi|156401591|ref|XP_001639374.1| predicted protein [Nematostella vectensis]
gi|156226502|gb|EDO47311.1| predicted protein [Nematostella vectensis]
Length = 636
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRL--GNNECPACRT 140
+R+E+ C +CL R+ + ++ C H FC+EC++K + GN CP CRT
Sbjct: 16 VREELTCSVCLEQFREPK-MLPCFHTFCKECLEKTKQSFRGNLLCPTCRT 64
>gi|62858263|ref|NP_001015995.1| BMI1 polycomb ring finger oncogene [Xenopus (Silurana) tropicalis]
gi|163916023|gb|AAI57201.1| hypothetical protein LOC548749 [Xenopus (Silurana) tropicalis]
Length = 325
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRADKTLQDIVYKLVPGLFKGE 90
>gi|344277626|ref|XP_003410601.1| PREDICTED: COMM domain-containing protein 3-like isoform 1
[Loxodonta africana]
Length = 469
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVHYLE-TSKYCPICDVQVHKTRP 208
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|327266658|ref|XP_003218121.1| PREDICTED: zinc finger protein RFP-like [Anolis carolinensis]
Length = 475
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLR 149
+ ++R+E+ CPICL +K ++ C H FC+ C+D+ + CP CR + L+
Sbjct: 7 VKELREELACPICLEFFKKPVSIA-CGHNFCQSCLDQYRKEKEASCPQCR-----KEVLK 60
Query: 150 DDL 152
+D+
Sbjct: 61 EDI 63
>gi|296482751|tpg|DAA24866.1| TPA: polycomb group RING finger protein 1 [Bos taurus]
Length = 247
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 19 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 73
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLR 149
L + +E++CPICL + + + C H FC CI K+M++ + CP C+ RR +R
Sbjct: 589 LERMGRELKCPICLSLYNSAVS-LSCNHVFCNACIVKSMKM-DATCPVCKIP-YHRREIR 645
Query: 150 DDLNYDALIAALYPDID 166
+ D+L+ ++Y +++
Sbjct: 646 GAPHMDSLV-SIYKNME 661
>gi|58383116|ref|XP_312405.2| AGAP002533-PA [Anopheles gambiae str. PEST]
gi|55242232|gb|EAA07500.2| AGAP002533-PA [Anopheles gambiae str. PEST]
Length = 222
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+KL + + + C IC G TV ECLH FC+ C+ K + NN CP C
Sbjct: 5 IKLKTLNEHITCEICRGYFIDATTVTECLHTFCKSCLVKHLE-ENNTCPTC 54
>gi|332260959|ref|XP_003279548.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 5 [Nomascus leucogenys]
Length = 699
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|149588816|ref|XP_001517507.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21-like [Ornithorhynchus
anatinus]
Length = 342
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+++ I KE+ CPICL + ++ +C H FC CI K R G++ CP CR +
Sbjct: 5 MQVERIGKEMTCPICLEFSGEPMSI-KCGHSFCHRCISKLWREGHSSCPECRAS-FQQED 62
Query: 148 LRDDLNYDALIAALYPDI 165
+R + L+ +L P +
Sbjct: 63 IRPNRQLGNLVESLKPVV 80
>gi|37574111|ref|NP_932109.1| polycomb group RING finger protein 1 [Mus musculus]
gi|20307063|gb|AAH28560.1| Polycomb group ring finger 1 [Mus musculus]
Length = 247
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 19 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 73
>gi|354498153|ref|XP_003511180.1| PREDICTED: polycomb group RING finger protein 1-like [Cricetulus
griseus]
Length = 247
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 19 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 73
>gi|47206993|emb|CAF92401.1| unnamed protein product [Tetraodon nigroviridis]
Length = 172
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 77 SGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECP 136
SG G + + + + CPICL + K ++ C H FC EC+ +++ + CP
Sbjct: 26 SGPGS----LAAPVESVESQFSCPICLEVYHKPVSIASCAHTFCGECLQPCLQVTSPLCP 81
Query: 137 ACRT 140
CR
Sbjct: 82 LCRV 85
>gi|260816735|ref|XP_002603243.1| hypothetical protein BRAFLDRAFT_93307 [Branchiostoma floridae]
gi|229288561|gb|EEN59254.1| hypothetical protein BRAFLDRAFT_93307 [Branchiostoma floridae]
Length = 877
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECIDK-AMRLGNNECPACRTH 141
+ CP+CL R R V+ CLH FC+EC+ + A + ECP CRT
Sbjct: 16 LTCPVCLLYFRDPR-VLPCLHTFCKECLQRWATKQQPLECPTCRTQ 60
>gi|339522219|gb|AEJ84274.1| polycomb group RING finger protein 5 [Capra hircus]
Length = 236
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKFVPGL---REQELERESEFWKKNK 102
>gi|71896207|ref|NP_001025573.1| polycomb group ring finger 2 [Xenopus (Silurana) tropicalis]
gi|60552364|gb|AAH91007.1| pcgf2 protein [Xenopus (Silurana) tropicalis]
Length = 317
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+K++++ + C +C G T++ECLH FC+ CI + + + CP C + R
Sbjct: 7 IKMTELNPHLMCALCGGYFIDAATIVECLHSFCKTCILRYLE-AHKFCPMCDSQVHKGRP 65
Query: 147 --SLRDDLNYDALIAALYPDI 165
S+R D ++ L P +
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGL 86
>gi|432896007|ref|XP_004076254.1| PREDICTED: nuclear factor 7, brain-like [Oryzias latipes]
Length = 476
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 92 DIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN------ECPACRTHCASR 145
D++KE+ CPICL + K +++C H FCR CI + N +CP CRT S+
Sbjct: 10 DLKKELTCPICLEVF-KDPVILKCGHNFCRFCI--CLHWDENGGDYGYQCPQCRT-VFSK 65
Query: 146 RSLRDDLNYDALIAAL 161
R+ + L+A L
Sbjct: 66 RTFTKNYLVQNLVAKL 81
>gi|317419829|emb|CBN81865.1| Polycomb complex protein BMI-1-A [Dicentrarchus labrax]
Length = 333
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C +
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYLET-SKYCPICDVQVHKTKP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|432108051|gb|ELK33032.1| Polycomb group RING finger protein 1 [Myotis davidii]
Length = 266
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 19 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 73
>gi|449275108|gb|EMC84081.1| E3 ubiquitin-protein ligase Topor [Columba livia]
Length = 353
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 55 PQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVME 114
PQ +T AAAA V G S ++ + + + D +CPICL + VM
Sbjct: 43 PQCTTAAAAAPVRGGSSTSPAPPSPPQQVDSMATEQHD-----RCPICLDSWEEASYVMP 97
Query: 115 CLHRFCRECIDKAMRLGNNECPACR 139
CLH+FC CI + + ECP C+
Sbjct: 98 CLHQFCYTCILRWAQ-SKPECPLCK 121
>gi|79480107|ref|NP_193839.4| protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Arabidopsis
thaliana]
gi|75158839|sp|Q8RXD4.1|BRCA1_ARATH RecName: Full=Protein BREAST CANCER SUSCEPTIBILITY 1 homolog;
Short=AtBRCA1
gi|19698963|gb|AAL91217.1| unknown protein [Arabidopsis thaliana]
gi|28372474|gb|AAO39850.1| BRCA1 [Arabidopsis thaliana]
gi|34365717|gb|AAQ65170.1| At4g21070 [Arabidopsis thaliana]
gi|332658996|gb|AEE84396.1| protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Arabidopsis
thaliana]
Length = 941
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLR 149
L + +E++CPICL + + + C H FC CI K+M++ + CP C+ RR +R
Sbjct: 7 LERMGRELKCPICLSLYN-SAVSLSCNHVFCNACIVKSMKM-DATCPVCKIP-YHRREIR 63
Query: 150 DDLNYDALIAALYPDID 166
+ D+L+ ++Y +++
Sbjct: 64 GAPHMDSLV-SIYKNME 79
>gi|13436326|gb|AAH04952.1| PCGF1 protein [Homo sapiens]
gi|312150760|gb|ADQ31892.1| polycomb group ring finger 1 [synthetic construct]
Length = 247
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 19 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 73
>gi|432951654|ref|XP_004084869.1| PREDICTED: polycomb group RING finger protein 1-like [Oryzias
latipes]
Length = 260
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V +K+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 29 EEKVKLKIKDLNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 83
>gi|403341406|gb|EJY70009.1| hypothetical protein OXYTRI_09248 [Oxytricha trifallax]
Length = 327
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 28/115 (24%)
Query: 41 LQRDHSNNLEEQQ--------PPQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVKLSD 92
LQ+ H L+E Q P +DS P + + N S ++S D +
Sbjct: 225 LQQRHFKKLKENQQKLQKNANPQEDSDPL---NQENNNSQDNQSQNDQSE---------- 271
Query: 93 IRKEVQCPICLGI-IRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR 146
E QCP+C G I T TV C H FC +CI ++++ ECP CR C ++
Sbjct: 272 ---ENQCPLCYGARINTTATV--CGHLFCWDCIHTSIKI-KQECPQCREPCVPQK 320
>gi|392566331|gb|EIW59507.1| hypothetical protein TRAVEDRAFT_58308 [Trametes versicolor
FP-101664 SS1]
Length = 526
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRT 140
+ +E+QC C I+ + V C H FC C+ +R G CPACRT
Sbjct: 83 LEEELQCGCCSAIVYRPVVVAPCQHFFCGSCVILWIRNGGTSCPACRT 130
>gi|326516306|dbj|BAJ92308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 6/140 (4%)
Query: 24 TPSEVVEAVLDDDGDDTLQRDHSNNLEEQQPPQDSTPAAAADVDGNESDRSRSSGDGEKD 83
TP V VLD+D +++ + ++ P + ++G GE
Sbjct: 89 TPIPPVALVLDEDEKPDDHEVGKKEVKQAEEEKEKAPVVEGKEKSGSAKEGEAAGSGE-- 146
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCA 143
+ + +R+E+ C ICL I + T C H FC +C+ A CP CR +
Sbjct: 147 ---LPCMDRLREELSCAICLDICFQPSTTA-CGHSFCMQCLKHAASKCGKRCPKCRQLIS 202
Query: 144 SRRSLRDDLNYDALIAALYP 163
+ RS + I L+P
Sbjct: 203 NSRSCTINTVLWNTIQLLFP 222
>gi|157818223|ref|NP_001100405.1| uncharacterized protein LOC302366 [Rattus norvegicus]
gi|149055522|gb|EDM07106.1| rCG38166 [Rattus norvegicus]
Length = 232
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 87 IVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
++ LS++ + C IC G + T+ ECLH FC+ CI K +N CP C
Sbjct: 111 LLPLSEMIPYISCSICKGYLIDAATITECLHTFCKSCIVKHFE-HSNRCPKC 161
>gi|348684604|gb|EGZ24419.1| hypothetical protein PHYSODRAFT_478652 [Phytophthora sojae]
Length = 251
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 6/107 (5%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRTHCAS 144
++++DI + + C +C G +R TV ECLH FC CI + + CP C +
Sbjct: 29 LRMADINEFLICKLCKGYLRDPYTVKECLHTFCHGCIRGFYLYDSTKSCSCPTCHVRLGA 88
Query: 145 R--RSLRDDLNYDALIAALYPDI-DKYEEEELAFQDEEAARNKQIQA 188
+ + D L L PD K EEEE F + + K++ A
Sbjct: 89 KPWAHIIPDPAMKELTEKLLPDYRAKEEEEESVFYAKLGIKRKRVDA 135
>gi|74203938|dbj|BAE28557.1| unnamed protein product [Mus musculus]
Length = 395
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E CPICLG I+ +T+ +C H FC CI +A+++ CP C
Sbjct: 160 QETTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC 202
>gi|291244940|ref|XP_002742351.1| PREDICTED: deltex 3-like [Saccoglossus kowalevskii]
Length = 1285
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 89 KLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+ ++ + ++CPIC+ + + + +C H FCR CID+A++ CP C
Sbjct: 1095 RFANTQSPLECPICMERVSDPKMLQDCQHTFCRACIDRALK-DKPVCPVC 1143
>gi|226875245|gb|ACO88988.1| tripartite motif-containing 6 isoform 2 (predicted) [Dasypus
novemcinctus]
Length = 416
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECI------DKAMRLGNNECPACRT 140
L DIR EV CPICL ++ + ++ +C H FC+ CI + + G + CP CRT
Sbjct: 6 LVDIRDEVTCPICLDLLMEPLSI-DCGHSFCQACITGNSKQSQISQEGESSCPVCRT 61
>gi|109157341|pdb|2CKL|A Chain A, Ring1b-Bmi1 E3 Catalytic Domain Structure
Length = 108
Score = 48.1 bits (113), Expect = 0.011, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|449283268|gb|EMC89948.1| Polycomb group RING finger protein 1, partial [Columba livia]
Length = 230
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 84 EFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCA 143
E V VK+ ++ + + C +C G T+ ECLH FC+ CI K ++ + CP C T
Sbjct: 2 EEVKVKMKELNEHIVCCLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKYCPMCNTKIH 60
Query: 144 SRR---SLRDDLNYDALIAALYPDIDKYEEEEL 173
+ +L+ D ++ L P + + EE+ +
Sbjct: 61 ETQPLLNLKLDRVMQDIVYKLVPGLQESEEKRI 93
>gi|326509579|dbj|BAJ87005.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525537|dbj|BAJ88815.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532854|dbj|BAJ89272.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Query: 30 EAVLDDDGDDTLQRDHSNNLEEQQPPQDSTPAAAADVDGNESDRSRSSGDGEKDEFVIVK 89
E V DD L + N + P + +P + S +S+S+G K+ VK
Sbjct: 92 EGVTHDDNATVLSHNTRNKRQRVAPVVNISP----ETGEGSSLQSKSAGKTSKEP---VK 144
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTH 141
++ CP+C + + T M C H FC CI +A++ +CP CR H
Sbjct: 145 VTPKEPIFTCPVCWNKLDEPATTM-CGHIFCTNCIKQAIQF-QKKCPTCRKH 194
>gi|321455673|gb|EFX66800.1| hypothetical protein DAPPUDRAFT_218894 [Daphnia pulex]
Length = 225
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 14/100 (14%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+KL + + C IC G + TV ECLH FC+ C+ K + NN CP+C
Sbjct: 5 IKLRSLNSHIICKICGGYLIDATTVTECLHTFCKSCLVKHLE-ENNTCPSCNIMIHQSHP 63
Query: 148 LR---DDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
L+ D ++ L PD+ QD E R K
Sbjct: 64 LQYISFDRTMQDIVYKLVPDL----------QDNETKREK 93
>gi|66804691|ref|XP_636078.1| hypothetical protein DDB_G0289719 [Dictyostelium discoideum AX4]
gi|60464424|gb|EAL62571.1| hypothetical protein DDB_G0289719 [Dictyostelium discoideum AX4]
Length = 1419
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Query: 97 VQCPICLGIIRK--TRTVMECLHRFCRECIDKAMRLGNNECPACRTHCAS-RRSLRDDLN 153
+ C IC I+K T+ C H+FC ECI + + N CP C++ +R+ +
Sbjct: 851 IDCIICTDTIKKEDISTICGCTHKFCFECILEWSKQTNT-CPLCKSRFVRIKRTFKQPRK 909
Query: 154 YDALIAALYPDIDKYEEEELA----------FQDEE 179
+++I + I +Y EEEL F DEE
Sbjct: 910 KNSVIVSAKDQIAEYTEEELVNLLGEDYEQHFNDEE 945
>gi|332245860|ref|XP_003272070.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Nomascus leucogenys]
Length = 475
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRL--GNNECPACRTHCASRRS 147
++ +++EV CPICL I++K T+ +C H FC +CI + G +CP C+T S
Sbjct: 7 VNKLQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIEETSRGFFKCPLCKT------S 59
Query: 148 LRDD-LNYDALIAALYPDIDKYEEEEL 173
+R + + +++L+ L I + E+
Sbjct: 60 VRKNAIRFNSLLWNLVEKIQALQASEV 86
>gi|61557118|ref|NP_001013172.1| polycomb group RING finger protein 6 [Rattus norvegicus]
gi|77416554|sp|Q5XI70.1|PCGF6_RAT RecName: Full=Polycomb group RING finger protein 6; AltName:
Full=RING finger protein 134
gi|53733579|gb|AAH83820.1| Polycomb group ring finger 6 [Rattus norvegicus]
Length = 351
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 78 GDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPA 137
D E +E ++ L ++ + C IC G + T+ ECLH FC+ CI + +N CP
Sbjct: 114 ADSEDEEERLINLVELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPK 172
Query: 138 C 138
C
Sbjct: 173 C 173
>gi|432901995|ref|XP_004076982.1| PREDICTED: polycomb group RING finger protein 6-like [Oryzias
latipes]
Length = 256
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 6/117 (5%)
Query: 61 AAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFC 120
A + NE + S D E + + L+ ++C +C G + T+ ECLH FC
Sbjct: 3 GPAGRWNNNEGSTNVSESDSEDE--TKLPLNQFYPYIRCGLCCGFLIDATTITECLHTFC 60
Query: 121 RECIDKAMRLGNNECPACRTHCASRRSL---RDDLNYDALIAALYPDIDKYEEEELA 174
+ CI + +N CP C + L R D ++ + P ++ E +++
Sbjct: 61 KSCIVRHF-FHSNRCPTCTIVVHQTQPLYNIRPDRQLQDIVYKMVPFLEGLERQQIC 116
>gi|343781183|pdb|3RPG|B Chain B, Bmi1RING1B-Ubch5c Complex Structure
Length = 117
Score = 47.8 bits (112), Expect = 0.011, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|255933169|ref|XP_002558055.1| Pc12g12410 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582674|emb|CAP80868.1| Pc12g12410 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 926
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---------CPACRT 140
L+D+ KE+ C IC ++ + T+++CLH FC C+ + + CP+CRT
Sbjct: 8 LADLEKELVCSICTELLYQPLTLLDCLHTFCGSCVKEWFSAQGSRRSRTSPRFTCPSCRT 67
Query: 141 HCASRRSLRDDLNYDALIAALYPDIDKYEEEE 172
R ++ + +PD D+ +E+
Sbjct: 68 EVRDTRPNATVTTLLDMVLSAHPDRDRATDEK 99
>gi|443685109|gb|ELT88825.1| hypothetical protein CAPTEDRAFT_107755, partial [Capitella teleta]
Length = 142
Score = 47.8 bits (112), Expect = 0.011, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRR- 146
+++ D + C +C G T+ ECLH FC+ CI K ++ N CP C T +
Sbjct: 5 LRIRDFNPHIVCSLCAGYYIDATTITECLHTFCKSCIVKYLQC-NKCCPQCTTKIHETQP 63
Query: 147 --SLRDDLNYDALIAALYPDIDKYEEEE 172
+L+ D ++ L P + YE EE
Sbjct: 64 FLNLKPDRVLQDIVYKLVPGL--YESEE 89
>gi|327263737|ref|XP_003216674.1| PREDICTED: e3 ubiquitin-protein ligase Topors-like [Anolis
carolinensis]
Length = 598
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 62 AAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCR 121
A+++ + N S S S G +E + + SD + +CPICL I+ + C HRFC
Sbjct: 5 ASSNEEVNSSGNSFSYLTGTGNENIAIA-SDGPSDSRCPICLEKIQNVAFLNPCFHRFCF 63
Query: 122 ECI-DKAMRLGNNECPACRTHCAS-RRSLRDDLNYDALIA 159
CI + + R ECP C+ H S +++ D +++ I
Sbjct: 64 ACILEWSDRKA--ECPLCKQHFNSFFHNIKTDTDFEEYIV 101
>gi|13507662|ref|NP_109639.1| probable E3 ubiquitin-protein ligase DTX3 [Mus musculus]
gi|300795345|ref|NP_001178918.1| protein deltex-3 [Rattus norvegicus]
gi|37076958|sp|Q80V91.2|DTX3_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase DTX3; AltName:
Full=Protein deltex-3; Short=Deltex3; Short=mDTX3
gi|11611473|dbj|BAB18942.1| Deltex3 [Mus musculus]
gi|71043440|gb|AAH99687.1| Deltex 3 homolog (Drosophila) [Mus musculus]
gi|187956946|gb|AAI57900.1| Deltex 3 homolog (Drosophila) [Mus musculus]
gi|223461016|gb|AAI38305.1| Deltex 3 homolog (Drosophila) [Mus musculus]
Length = 347
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E CPICLG I+ +T+ +C H FC CI +A+++ CP C
Sbjct: 160 QETTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC 202
>gi|237681125|ref|NP_009230.2| breast cancer type 1 susceptibility protein isoform 5 [Homo
sapiens]
gi|47939870|gb|AAH72418.1| BRCA1 protein [Homo sapiens]
Length = 699
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|451850243|gb|EMD63545.1| hypothetical protein COCSADRAFT_171813 [Cochliobolus sativus
ND90Pr]
Length = 911
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDK--------AMRLGNNECPACRTHC 142
SD+ KE+ C IC ++ + T+++CLH FC C+ + A + CP+CR
Sbjct: 12 SDLEKELTCSICTDLLYQPLTLLDCLHTFCGACLKEWFAFQASTATSIHPYTCPSCR--- 68
Query: 143 ASRRSLRDDLNYDALIAALY---PDIDKYEEEELA 174
AS R+ + + L+ P+ K EEE+ A
Sbjct: 69 ASVRTTQPNATVTTLLDIFIKANPERGKTEEEKQA 103
>gi|55741429|ref|NP_001007001.1| polycomb group RING finger protein 1 [Rattus norvegicus]
gi|81891476|sp|Q6DLV9.1|PCGF1_RAT RecName: Full=Polycomb group RING finger protein 1; AltName:
Full=Nervous system Polycomb-1; Short=NSPc1
gi|50345835|gb|AAT74859.1| Nspc1-like protein [Rattus norvegicus]
Length = 243
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V VK+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 19 EEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 73
>gi|351706754|gb|EHB09673.1| Polycomb group RING finger protein 2 [Heterocephalus glaber]
Length = 452
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTH---CAS 144
+K++++ + C +C G T++ECLH FC+ CI + + N CP C C
Sbjct: 133 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVPVLACGL 191
Query: 145 RRSLRDDLNYDALIAALYPDIDKYE 169
S D ++ L P + K E
Sbjct: 192 GESRGSDKTLQDIVYKLVPGLFKDE 216
>gi|3377941|emb|CAA17526.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1331
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLR 149
L + +E++CPICL + + + C H FC CI K+M++ + CP C+ RR +R
Sbjct: 372 LERMGRELKCPICLSLYNSAVS-LSCNHVFCNACIVKSMKM-DATCPVCKIP-YHRREIR 428
Query: 150 DDLNYDALIAALYPDID 166
+ D+L+ ++Y +++
Sbjct: 429 GAPHMDSLV-SIYKNME 444
>gi|134056574|emb|CAK37628.1| unnamed protein product [Aspergillus niger]
Length = 944
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 21/118 (17%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE----------CPACR 139
L D+ KE+ C IC ++ + T+++CLH FC C+ + + CP+CR
Sbjct: 11 LGDLEKELICSICTDLLYQPLTLLDCLHTFCGSCLKEWFSAQASRARSSSSVRFTCPSCR 70
Query: 140 THCASRRSLRDDLNYDAL---IAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTF 194
A R R + L + A PD DK EE+ EE AR + S+ T
Sbjct: 71 ---AVVRETRPNATVTTLLDMVLAASPDRDKSAEEK-----EEIARRYKHGDSVFPTL 120
>gi|334349731|ref|XP_001378274.2| PREDICTED: tripartite motif-containing protein 59-like [Monodelphis
domestica]
Length = 338
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN-------ECPACRTHC 142
+ +E+ CPIC I R V+ C H FCR+C++ ++ N CP CR
Sbjct: 1 MHKFEEELTCPICYSIFEDPR-VLPCSHTFCRKCLENVLQASGNFYGRRDITCPTCRHII 59
Query: 143 ASRRSLRDDLNYDALIAALYPDIDKYEEEE 172
D L + + A+ I+KYE+EE
Sbjct: 60 EITPPGIDSLPINFALRAI---IEKYEQEE 86
>gi|119623662|gb|EAX03257.1| tripartite motif-containing 31, isoform CRA_a [Homo sapiens]
Length = 267
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA--MRLGNNECPACRTHCASRRS 147
++ +++EV CPICL I++K T+ +C H FC +CI + G +CP C+T S
Sbjct: 7 VNKLQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKT------S 59
Query: 148 LRDD-LNYDALIAALYPDIDKYEEEELAFQDEEAA 181
+R + + +++L+ L I + E+ + +EA
Sbjct: 60 VRKNAIRFNSLLRNLVEKIQALQASEVQSKRKEAT 94
>gi|449329944|gb|AGE96211.1| hypothetical protein ECU09_0100 [Encephalitozoon cuniculi]
Length = 527
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 73 RSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGN 132
R+ +GD E D + V+L R ++C +C + T +++C+H FC EC++ +R+ +
Sbjct: 449 RAIQNGDSEGDPDLAVQLERYRGLLRCSLCDTRFKDT-AIIKCMHCFCEECVNSRIRMRD 507
Query: 133 NECPAC 138
CP+C
Sbjct: 508 RRCPSC 513
>gi|116283824|gb|AAH30969.1| BRCA1 protein [Homo sapiens]
Length = 657
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASRRS 147
++ ++K ++CPICL +I++ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 INAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRS 72
Query: 148 LRDDLNYDALIAALYPDIDKYE 169
L++ + L+ L I ++
Sbjct: 73 LQESTRFSQLVEELLKIICAFQ 94
>gi|85014133|ref|XP_955562.1| hypothetical protein ECU09_0100 [Encephalitozoon cuniculi GB-M1]
gi|19171256|emb|CAD26981.1| hypothetical protein [Encephalitozoon cuniculi GB-M1]
Length = 527
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 73 RSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGN 132
R+ +GD E D + V+L R ++C +C + T +++C+H FC EC++ +R+ +
Sbjct: 449 RAIQNGDSEGDPDLAVQLERYRGLLRCSLCDTRFKDT-AIIKCMHCFCEECVNSRIRMRD 507
Query: 133 NECPAC 138
CP+C
Sbjct: 508 RRCPSC 513
>gi|148225863|ref|NP_001088007.1| polycomb complex protein BMI-1-B [Xenopus laevis]
gi|82198007|sp|Q640D5.1|BMI1B_XENLA RecName: Full=Polycomb complex protein BMI-1-B; AltName:
Full=Polycomb group RING finger protein 4-B
gi|52138943|gb|AAH82694.1| LOC494698 protein [Xenopus laevis]
Length = 323
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS 147
+K++++ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDAATIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 148 L---RDDLNYDALIAALYPDIDKYE 169
L R D ++ L P + K E
Sbjct: 66 LLNIRADKTLQDIVYKLVPGLFKGE 90
>gi|380807723|gb|AFE75737.1| polycomb group RING finger protein 6 isoform a, partial [Macaca
mulatta]
Length = 98
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
D E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 15 DSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 73
>gi|258596895|ref|XP_001349606.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|254688468|gb|AAC71877.3| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 568
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAM-RLGNNECPACRT 140
CPICL +I + T+ C H FC +C+ A+ + + CP+CRT
Sbjct: 214 CPICLSLIHEPVTLNSCFHSFCWKCLATAIQKYSIDNCPSCRT 256
>gi|284009784|ref|NP_001165007.1| nuclear factor 7, brain [Xenopus (Silurana) tropicalis]
gi|183985957|gb|AAI66279.1| Unknown (protein for MGC:185544) [Xenopus (Silurana) tropicalis]
Length = 648
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMR-LGNNECPA 137
D K+ + D +E+ CP+C+ + K ++ C H FCR CIDKA + CP
Sbjct: 164 DASKNASTLGAAGDFAEELTCPLCMELF-KDPVMVACGHNFCRSCIDKAWEGQSSFACPE 222
Query: 138 CRTHCASRR 146
C+ R+
Sbjct: 223 CKESITDRK 231
>gi|321472093|gb|EFX83064.1| hypothetical protein DAPPUDRAFT_101032 [Daphnia pulex]
Length = 292
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 15/128 (11%)
Query: 62 AAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCR 121
A +V GN+ D SS D V+ K+ + E++C IC ++ + T + C+H FC+
Sbjct: 102 AKENVAGNQ-DCVSSSKD------VVDKMQRMEIELRCGICSELM-VSATTLNCMHTFCQ 153
Query: 122 ECIDKAMRLGNNE-----CPACRTHCAS-RRSLRDDLNYDALIAALYPDIDKYEEEELAF 175
C+ + N CP CR S RR+ D N +I Y + +K +EL
Sbjct: 154 YCVTQWKNFEKNRAPIVGCPVCRDTITSERRNFSMD-NIIGIIVDCYSEDEKNNRKELMK 212
Query: 176 QDEEAARN 183
Q +E RN
Sbjct: 213 QHQELTRN 220
>gi|124804146|ref|XP_001347915.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|23496168|gb|AAN35828.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 689
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDL 152
I EV+C IC+ ++ T+ C H FCR+CI+KA N CP CR++ ++++ +L
Sbjct: 219 IPSEVECAICMKLLIVPVTI-PCGHNFCRDCIEKAKEYK-NLCPLCRSNMGDKKNI--NL 274
Query: 153 NYDALIAALYP 163
LI YP
Sbjct: 275 LLGELIKQKYP 285
>gi|71043358|gb|AAZ20641.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 1072
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC-ASRR 146
V L+ + + C +C G + T++ECLH FC C+ +R CP C ++
Sbjct: 252 VLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLR-KERFCPRCEMVINNAKP 310
Query: 147 SLRDDLNYDALIAALYPDIDKYEEEEL---AF---QDEEAA 181
+++ D A++ L P + YE E + AF + EEAA
Sbjct: 311 NIKSDTTLQAIVYKLVPGL--YERELMRKRAFYKDRPEEAA 349
>gi|327278154|ref|XP_003223827.1| PREDICTED: polycomb group RING finger protein 5-like [Anolis
carolinensis]
Length = 256
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCCICKGYLIKPTTVTECLHTFCKSCIVQHFE-ESNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPQL---REKELHCEAEFWRKNK 102
>gi|149698328|ref|XP_001498222.1| PREDICTED: tripartite motif-containing protein 75-like [Equus
caballus]
Length = 470
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAM--RLGNNECPACRTHCASR 145
L+ ++ E CPICL +R T+ EC H FCR CI ++ R CP CR C R
Sbjct: 7 LAGLQAEANCPICLDYLRDPVTI-ECGHNFCRSCIQQSWEDRWDMFLCPVCRHPCQQR 63
>gi|410900398|ref|XP_003963683.1| PREDICTED: RING finger protein 166-like [Takifugu rubripes]
Length = 250
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 93 IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRT 140
I + CPICL + K ++ C H FC EC+ +++ + CP CR
Sbjct: 40 IESQFSCPICLEVYHKPVSIASCAHTFCGECLQPCLQVTSPLCPLCRV 87
>gi|351694673|gb|EHA97591.1| Tripartite motif-containing protein 60 [Heterocephalus glaber]
Length = 450
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMR--LGNNECPACRTHCASRR 146
L+D++ E CPICLG ++ T+ C H FC CI ++ + + CP+C C R+
Sbjct: 7 LADLQTEASCPICLGYLKNPVTIY-CGHNFCLPCISESWKDLKVSFPCPSCHYLCPHRK 64
>gi|320170327|gb|EFW47226.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 413
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLRDDLNYDALI 158
CPIC ++ T + C HR+C+ CID+ + + CP C T L+ D YDAL+
Sbjct: 8 CPICCSLLSNTTITIPCGHRYCKSCIDECLN-RKSVCPCCNTRLNGGVVLQRDHQYDALL 66
>gi|225717392|gb|ACO14542.1| Polycomb group RING finger protein 1 [Esox lucius]
Length = 262
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V +K+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 29 EEEVKLKIKDLNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 83
>gi|302771287|ref|XP_002969062.1| hypothetical protein SELMODRAFT_440578 [Selaginella moellendorffii]
gi|300163567|gb|EFJ30178.1| hypothetical protein SELMODRAFT_440578 [Selaginella moellendorffii]
Length = 394
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 97 VQCPICLGIIRKTRTVMECLHRFCRECI-DKAMRLGNNECPACRTHCAS--RRSLRDDLN 153
+ CP+C + R+ T+ ECLH FC++CI D+ N CP C + LR D
Sbjct: 24 LTCPLCGNLFREATTISECLHTFCKDCIHDRFSDEETNSCPMCNVDLGTVPLEKLRADPQ 83
Query: 154 YDALIAALY 162
D + A ++
Sbjct: 84 LDDVQAKIF 92
>gi|432113021|gb|ELK35599.1| Polycomb group RING finger protein 6 [Myotis davidii]
Length = 351
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 79 DGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+ E +E ++ LS++ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 115 ESEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 173
Query: 139 RTHCASRRSL---RDDLNYDALIAALYPDIDKYEEEEL 173
+ L R D ++ L D+++ E++++
Sbjct: 174 NIVVHQTQPLYNIRLDRQLQDIVYKLVIDLEEREKKQM 211
>gi|71043362|gb|AAZ20643.1| truncated posterior sex combs [Drosophila melanogaster]
gi|71043370|gb|AAZ20647.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 1095
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC-ASRR 146
V L+ + + C +C G + T++ECLH FC C+ +R CP C ++
Sbjct: 252 VLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLR-KERFCPRCEMVINNAKP 310
Query: 147 SLRDDLNYDALIAALYPDIDKYEEEEL---AF---QDEEAA 181
+++ D A++ L P + YE E + AF + EEAA
Sbjct: 311 NIKSDTTLQAIVYKLVPGL--YERELMRKRAFYKDRPEEAA 349
>gi|168063938|ref|XP_001783924.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664554|gb|EDQ51269.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 443
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 77 SGDGEKDEFVIVKL-------SDIRKEVQCPICLGIIRK-TRTVME-CLHRFCRECIDKA 127
SG +DE +I ++ S +EV CPICL I + T V++ C+HRFC CI++
Sbjct: 99 SGPVFRDESIISRIRNGDQGASTSSQEVMCPICLANIEESTEAVLQWCMHRFCTHCIEEW 158
Query: 128 MRLGNNECPACRT 140
R+ CP C+
Sbjct: 159 SRV-RRVCPLCKA 170
>gi|195380025|ref|XP_002048771.1| GJ21143 [Drosophila virilis]
gi|194143568|gb|EDW59964.1| GJ21143 [Drosophila virilis]
Length = 1561
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC-ASRR 146
V L+ + + C +C G + T++ECLH FC C+ +R CP C ++
Sbjct: 224 VLLTAVNAHIICHLCQGYLINATTIVECLHSFCHSCLINHLR-KERYCPRCEMVINNAKP 282
Query: 147 SLRDDLNYDALIAALYPDIDKYEEE 171
+++ D A++ L P + YE E
Sbjct: 283 NIKSDTTLQAIVYKLVPGL--YERE 305
>gi|194205865|ref|XP_001502796.2| PREDICTED: polycomb group RING finger protein 5-like [Equus
caballus]
Length = 260
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRSLR 149
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQLK------ 61
Query: 150 DDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQ 187
+ Y LI L+ +D EE+ F+ R ++++
Sbjct: 62 --VVYKILIETLFSRLDN-TLEEIIFKLVPGLREQELE 96
>gi|260812395|ref|XP_002600906.1| hypothetical protein BRAFLDRAFT_215099 [Branchiostoma floridae]
gi|229286196|gb|EEN56918.1| hypothetical protein BRAFLDRAFT_215099 [Branchiostoma floridae]
Length = 191
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 95 KEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACR 139
KE CPICL T C H+FC +C+D A++L + +CP C+
Sbjct: 7 KEDTCPICLCNFTGPVTTTRCKHKFCTDCLDSALKL-SGQCPICK 50
>gi|348511743|ref|XP_003443403.1| PREDICTED: polycomb group RING finger protein 1-like [Oreochromis
niloticus]
Length = 261
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 DEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+E V +K+ D+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 29 EEEVKLKIKDLNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKYCPMC 83
>gi|260792738|ref|XP_002591371.1| hypothetical protein BRAFLDRAFT_227329 [Branchiostoma floridae]
gi|229276576|gb|EEN47382.1| hypothetical protein BRAFLDRAFT_227329 [Branchiostoma floridae]
Length = 653
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDK-AMRLGNNECPACRTHCA 143
CP+C+ R R V+ CLH FCREC+ + A + ECP CRT +
Sbjct: 18 CPVCMLHFRDPR-VLPCLHTFCRECLQEWATKQQPLECPTCRTQVS 62
>gi|427781769|gb|JAA56336.1| Putative polycomb group ring finger protein 3 [Rhipicephalus
pulchellus]
Length = 238
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
++L + + C IC G + TV ECLH FC+ C+ K + NN CP C
Sbjct: 17 IRLKTLNNHIICKICKGYLIDATTVTECLHTFCKSCLVKHLE-DNNTCPTC 66
>gi|343961883|dbj|BAK62529.1| tripartite motif-containing protein 31 [Pan troglodytes]
Length = 347
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKA--MRLGNNECPACRTHCASRRS 147
++ +++EV CPICL I++K T+ +C H FC +CI + G +CP C+T S
Sbjct: 35 VNKLQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKT------S 87
Query: 148 LRDD-LNYDALIAALYPDIDKYEEEELAFQDEEAA 181
+R + + +++L+ L I + E+ + +EA
Sbjct: 88 VRKNAIRFNSLLRNLVEKIQALQASEVQSKRKEAT 122
>gi|452820378|gb|EME27421.1| zinc finger (C3HC4-type RING finger) family protein [Galdieria
sulphuraria]
Length = 381
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 99 CPICLGIIRKTRTVMECLHRFCRECIDKAMR--LGNNECPACRTHCASRRSLRDDLNYDA 156
CPICL + + T + C H FCR CI +A+ L N CP CR+ + ++
Sbjct: 163 CPICLYVFYEPIT-LRCSHTFCRSCISQAVYGPLNMNSCPVCRSELGLEPY---EFALNS 218
Query: 157 LIAALYPDIDKYEEEELAFQDEEAARNKQIQASIAQTFQRQ 197
L+ ++ D E EE A + + AS+ + +R+
Sbjct: 219 LLTSIIEDAFPLHAELSKRMHEERASDLSLDASVQKALRRR 259
>gi|281345779|gb|EFB21363.1| hypothetical protein PANDA_019595 [Ailuropoda melanoleuca]
Length = 796
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 75 RSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE 134
+S DG +F LS + + QC C ++ + T + C H C++C+D++ R
Sbjct: 707 KSLKDGPFQKF----LSKVEEAFQCICCQELVFRPITTV-CQHNVCKDCLDRSFRAQVFS 761
Query: 135 CPACRTHCASRRSLRDDLNYDALIAALYP 163
CPACR +++ + A+++ L+P
Sbjct: 762 CPACRYDLGRSYAMQVNQRLQAILSQLFP 790
>gi|353336374|gb|AEQ93727.1| recombination activating protein 1, partial [Norops cupreus]
Length = 912
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASR---RS 147
S+ K + C IC I+ M C H FCR CI K +++ + CPACR C
Sbjct: 250 SNFVKSISCQICEHILADPVETM-CKHLFCRACIFKCLKVMGSYCPACRYPCFPTDLVSP 308
Query: 148 LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNKQIQ 187
++ L+ + + P D EE L +R+K+I+
Sbjct: 309 VKSFLSIMNSLPVICPIKDCQEEVCLGKYSHHLSRHKEIK 348
>gi|297722377|ref|NP_001173552.1| Os03g0632800 [Oryza sativa Japonica Group]
gi|255674724|dbj|BAH92280.1| Os03g0632800 [Oryza sativa Japonica Group]
Length = 203
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 86 VIVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNE---CPACRTH- 141
V+VK + + + CP+C ++R TV ECLH FCR+CI + +L + E CP C+
Sbjct: 97 VMVKRELLARCMTCPLCGRLLRDATTVSECLHTFCRKCIYE--KLNDEEVESCPVCKIDL 154
Query: 142 -CASRRSLRDDLNYDALIAALYPDIDKYEEEELAFQDEEAAR 182
C LRD N A I KY ++L +E R
Sbjct: 155 GCTPVEKLRDG-NIPA------SSIQKYLMQKLGLPNEAEVR 189
>gi|221139865|ref|NP_001137520.1| similar to Tripartite motif-containing protein 35 (Hemopoietic
lineage switch protein 5) [Danio rerio]
Length = 452
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 91 SDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNN-ECPACRT 140
S + + CP+C I KT ++ C H FC+EC+ + R N ECP CRT
Sbjct: 3 SSAKDDYTCPVCQDIF-KTPVILSCGHSFCQECLQQCWRSENTQECPVCRT 52
>gi|444726159|gb|ELW66699.1| putative E3 ubiquitin-protein ligase HECTD2 [Tupaia chinensis]
Length = 653
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPAC 138
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRC 56
>gi|395820790|ref|XP_003783743.1| PREDICTED: polycomb group RING finger protein 5 [Otolemur
garnettii]
Length = 256
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELERECEFWKKNK 102
>gi|395331051|gb|EJF63433.1| hypothetical protein DICSQDRAFT_55475 [Dichomitus squalens LYAD-421
SS1]
Length = 438
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 68 GNESDRSRSSGDGEKDEFVIVKLSD-IRKEVQCPICLGIIRKTRTVMECLHRFCRECIDK 126
G + SR+S DG LSD + +E+QC C I+ + V C H FC C+
Sbjct: 67 GESEEGSRASVDGGA-------LSDNLEEELQCGCCSAIVYRPVVVNPCQHFFCGSCLML 119
Query: 127 AMRLGNNECPACRT 140
++ G CPACRT
Sbjct: 120 WIKNGGTSCPACRT 133
>gi|195027952|ref|XP_001986846.1| GH21599 [Drosophila grimshawi]
gi|193902846|gb|EDW01713.1| GH21599 [Drosophila grimshawi]
Length = 1357
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 88 VKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHC-ASRR 146
V L+ + + C +C G + T++ECLH FC C+ +R CP C ++
Sbjct: 7 VLLTAVNPHIICHLCQGYLINATTIVECLHSFCHNCLINHLR-KERYCPRCEMVINNAKP 65
Query: 147 SLRDDLNYDALIAALYPDIDKYEEE 171
+++ D A++ L P + YE E
Sbjct: 66 NIKSDTTLQAIVYKLVPGL--YERE 88
>gi|328354104|emb|CCA40501.1| DNA repair protein RAD5 [Komagataella pastoris CBS 7435]
Length = 432
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 99 CPICLGIIRKT---RTVMECLHRFCRECIDKAMRLGNNECPACR 139
CPICL + R +++C H+F RECID+ + G N CP CR
Sbjct: 380 CPICLINYKNGDYGRALVDCKHQFHRECIDQWLIQGENVCPLCR 423
>gi|123794666|sp|Q3UK78.1|PCGF5_MOUSE RecName: Full=Polycomb group RING finger protein 5; AltName:
Full=RING finger protein 159
gi|74222234|dbj|BAE26924.1| unnamed protein product [Mus musculus]
gi|219519442|gb|AAI45591.1| Pcgf5 protein [Mus musculus]
Length = 256
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 90 LSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKAMRLGNNECPACRTHCASRRS-- 147
+ D + C IC G + K TV ECLH FC+ CI + +N+CP C
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLE 67
Query: 148 -LRDDLNYDALIAALYPDIDKYEEEELAFQDEEAARNK 184
LR D + +I L P + E+EL + E +NK
Sbjct: 68 MLRLDNTLEEIIFKLVPGL---REQELQRELEFWKKNK 102
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.130 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,429,892,082
Number of Sequences: 23463169
Number of extensions: 324670444
Number of successful extensions: 1125800
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1565
Number of HSP's successfully gapped in prelim test: 9495
Number of HSP's that attempted gapping in prelim test: 1119934
Number of HSP's gapped (non-prelim): 13465
length of query: 471
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 325
effective length of database: 8,933,572,693
effective search space: 2903411125225
effective search space used: 2903411125225
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 79 (35.0 bits)