Query 012094
Match_columns 471
No_of_seqs 207 out of 529
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 21:30:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012094.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012094hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zws_A Neutral ceramidase; pri 100.0 5.8E-97 2E-101 808.9 36.4 372 1-471 23-397 (646)
2 1xn9_A 30S ribosomal protein S 42.9 24 0.00081 29.6 4.1 32 47-80 31-62 (101)
3 1u9d_A Hypothetical protein VC 40.1 1.2E+02 0.0041 26.1 8.3 77 47-129 32-111 (122)
4 4eyb_A Beta-lactamase NDM-1; m 39.2 53 0.0018 30.8 6.5 49 20-77 75-123 (270)
5 1ywx_A 30S ribosomal protein S 39.2 30 0.001 29.1 4.2 32 47-80 31-62 (102)
6 2v94_A RPS24, 30S ribosomal pr 38.9 29 0.00098 29.4 4.0 34 45-80 38-71 (107)
7 2xcz_A Possible ATLS1-like lig 38.6 1.3E+02 0.0046 24.3 8.3 85 44-131 16-103 (115)
8 1uiz_A MIF, macrophage migrati 32.8 55 0.0019 26.8 4.9 50 23-75 48-102 (115)
9 2g1d_A 30S ribosomal protein S 32.3 24 0.00081 29.5 2.4 33 46-80 31-63 (98)
10 1hfo_A Migration inhibitory fa 32.1 58 0.002 26.5 4.9 50 23-75 47-101 (113)
11 2y8b_A Metallo-B-lactamase; hy 29.8 97 0.0033 28.8 6.7 51 18-77 66-116 (265)
12 3u5c_Y RP50, 40S ribosomal pro 28.3 34 0.0012 30.2 2.9 32 47-80 36-67 (135)
13 2zo4_A Metallo-beta-lactamase 28.3 1.3E+02 0.0045 28.3 7.4 52 19-77 21-73 (317)
14 2xzm_P RPS24E; ribosome, trans 27.7 55 0.0019 29.3 4.2 32 47-80 34-65 (149)
15 2fhx_A SPM-1; metallo-beta-lac 27.6 1.3E+02 0.0045 27.0 7.0 51 19-77 29-79 (246)
16 3djh_A Macrophage migration in 26.3 74 0.0025 26.2 4.6 49 22-73 46-99 (114)
17 1axh_A Atracotoxin-HVI, ACTX-H 25.7 29 0.00099 23.8 1.5 19 302-320 2-20 (37)
18 2wkb_A Macrophage migration in 25.4 65 0.0022 26.9 4.1 44 30-75 54-102 (125)
19 3fwu_A Macrophage migration in 24.2 55 0.0019 28.1 3.4 44 30-75 75-123 (133)
20 3fwt_A Macrophage migration in 22.9 3.5E+02 0.012 22.9 8.7 87 45-136 38-129 (133)
21 1uiz_A MIF, macrophage migrati 21.8 2.2E+02 0.0074 23.0 6.6 85 44-131 16-103 (115)
22 3aj3_A MLR6805 protein, 4-pyri 21.7 1.2E+02 0.0041 27.9 5.6 56 15-77 30-99 (274)
23 1n62_B Carbon monoxide dehydro 21.1 1.5E+02 0.0052 33.0 7.1 107 19-130 506-613 (809)
24 2os5_A Acemif; macrophage migr 21.0 1.1E+02 0.0038 25.1 4.6 44 30-75 54-102 (119)
25 3l6n_A Metallo-beta-lactamase; 20.6 1.1E+02 0.0037 27.0 4.9 52 18-78 29-80 (219)
26 3b64_A Macrophage migration in 20.1 1E+02 0.0035 25.0 4.2 39 31-71 55-98 (112)
No 1
>2zws_A Neutral ceramidase; prism fold and beta-sandwich fold, hydrolase, lipid metaboli secreted; HET: PLM; 1.40A {Pseudomonas aeruginosa} PDB: 2zxc_A*
Probab=100.00 E-value=5.8e-97 Score=808.88 Aligned_cols=372 Identities=42% Similarity=0.747 Sum_probs=342.3
Q ss_pred CCccCCCCCccceeecceEEEEEEEEeC-CCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCC
Q 012094 1 MMGYANMEQIASGIHFRLRARTFIVAEP-QGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGP 79 (471)
Q Consensus 1 M~GYa~~~q~a~GIhdrL~ARAfVl~d~-~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSGP 79 (471)
||||+.+.|+++|||||||||||||+++ +++|+|||++|++|+++.++++|+++|+++||++|+++||+|++|||||||
T Consensus 23 m~GYa~~~q~a~Gihd~L~aRA~vl~d~~~~~rvv~Vs~D~~~~~~~v~~~V~~~L~~~~g~~~~~~nV~isaTHTHSgP 102 (646)
T 2zws_A 23 MMGYSSLEQKTAGIHMRQWARAFVIEEAASGRRLVYVNTDLGMIFQAVHLKVLARLKAKYPGVYDENNVMLAATHTHSGP 102 (646)
T ss_dssp EESSCCTTCEEEEESSCCEEEEEEEEESSSCCEEEEEEESSSCCCHHHHHHHHHHHHHHSTTTCCTTTEEEEECCBSBEE
T ss_pred ecCccccCccccceecceEEEEEEEEcCCCCCEEEEEEECcccCCHHHHHHHHHHHHHHhCCCCChhHEEEEeeeeCCCC
Confidence 8999999999999999999999999984 379999999999999999999999999999999999999999999999999
Q ss_pred CCCccchhhhcccccchhhHHHHHHHHHHHHHHHHHhcCCceEEEEEEEEeccccccCChhhhcCCChhhcccCCCCCCC
Q 012094 80 GGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDK 159 (471)
Q Consensus 80 gg~~~~~l~~i~~~Gf~~~y~~~lvdgIv~AI~~A~~~l~Pa~i~~g~g~~~~~~~NRs~~ay~~NP~~er~~y~g~vD~ 159 (471)
++|+++.+|+++..||+++|+++|+++|++||++||++|+|++|.++++++.++++|||+.+|++|| ||++|++++||
T Consensus 103 ~g~~~~~l~~~~~~g~~~~y~~~lv~~iv~AI~~A~~~l~pa~l~~g~g~~~~~~~NRs~~ay~~NP--er~~~~g~vD~ 180 (646)
T 2zws_A 103 GGFSHYAMYNLSVLGFQEKTFNAIVDGIVRSIERAQARLQPGRLFYGSGELRNASRNRSLLSHLKNP--DIAGYEDGIDP 180 (646)
T ss_dssp CCCCSSHHHHGGGTBCCHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSEEESCHHHHTTCS--CCTTCTTSCCC
T ss_pred cccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCCcEEEEEEEEEeCcceecCChhhhhcCc--cccccCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 89999999999
Q ss_pred eeEEEEEEeCCCCcEEEEEeeeccccccCCCCccccCChHHHHHHHHHHHhcccCCCCCCcccccccCCCcccccccccc
Q 012094 160 EMTLLKFVDDQWGPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDF 239 (471)
Q Consensus 160 ~m~vL~f~~~dG~~ia~L~nfA~HpTsl~~~N~lIS~D~~G~As~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (471)
+|++|+|++.+|+++|+|+|||||||+|+++|++||+|||||++++||+.+++
T Consensus 181 ~~~vL~f~~~dg~~ig~l~~fA~HpTsl~~~N~liS~D~~G~a~~~lE~~~~~--------------------------- 233 (646)
T 2zws_A 181 QMSVLSFVDANGELAGAISWFPVHSTSMTNANHLISPDNKGYASYHWEHDVSR--------------------------- 233 (646)
T ss_dssp EEEEEEEEETTCCEEEEEEECCCCBCSSCTTCCEEBCHHHHHHHHHHHHTTCC---------------------------
T ss_pred ceEEEEEEeCCCCEEEEEEEEccCceecCCCCCeecCccHHHHHHHHHHHhCC---------------------------
Confidence 99999999999999999999999999999999999999999999999998654
Q ss_pred ccchhHHHHHhhccCCCCCCchhhhhhHhhhhcccccccCCCCeEEEeecCCCCCCCCCCCCCcccCCCCCCCCCCCCCC
Q 012094 240 RNNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNHSTCG 319 (471)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fVaaFaqsn~GDvsPN~~g~~c~~~g~~c~~~~s~c~ 319 (471)
.++|||+|+|+|+||||||+.
T Consensus 234 ----------------------------------------~~~fva~F~qg~~GDvsP~~~------------------- 254 (646)
T 2zws_A 234 ----------------------------------------KSGFVAAFAQTNAGNLSPNLN------------------- 254 (646)
T ss_dssp ----------------------------------------STTCEEEEECSSCTTEEECCC-------------------
T ss_pred ----------------------------------------CCCeEEEEeccCcccCCcccc-------------------
Confidence 357999999999999999986
Q ss_pred CCCcccccCCCCCCCcchhHHHHHHHHHHHHHHHHhhcCcccccceeEEEEeeecCcceEeCcCCCCCCCcccCCccccc
Q 012094 320 GKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMG 399 (471)
Q Consensus 320 g~~~~c~~~gP~~~d~~~st~iig~~q~~~A~~l~~~~~~~l~g~v~~~~~~vdm~~~~v~~~~~~~~~~~~~tc~~a~G 399 (471)
.|+++||+ .|+||++++||++|+++|+++|+++.++|+|+|+++|+||||++++|.++++ ++...+||++|||
T Consensus 255 ----~~~~~Gp~-~~~~e~~~~iG~~~~~~a~~~l~~~~~~l~g~v~~~~~~vdm~~~~v~~~~~--~g~~~~tc~~a~g 327 (646)
T 2zws_A 255 ----LKPGSGPF-DNEFDNTREIGLRQFAKAYEIAGQAQEEVLGELDSRFRFVDFTRLPIRPEFT--DGQPRQLCTAAIG 327 (646)
T ss_dssp ----CCTTCCTT-SCHHHHHHHHHHHHHHHHHHHHHHCCEEECSCEEEEEEEEECTTCEECGGGS--SSSCEECCCCCEE
T ss_pred ----ccccCCCC-cccHHHHHHHHHHHHHHHHHHHhhccccccCCcceEEEEecCcceeeecccC--Ccccceechhhhc
Confidence 47889999 5999999999999999999999988899999999999999999999987654 5578999999999
Q ss_pred ccccccC-CCCCCCcCccCCCCCCCchHHHhhhccCCC-CHhhhhccCCCCceecCCCCCCCCCcccccccccC
Q 012094 400 FAFAAGT-TDGPGAFDFTQGDDKGNPFWRLVRDLLKKP-DKEQINCQYPKPILLDTGEMKQPYDWAVSPIPDWI 471 (471)
Q Consensus 400 ~sfaaGt-~DGpg~~~f~qg~~~~~p~w~~~~~~~~~p-~~~~~~cq~pKpill~~G~~~~p~~w~p~i~~~q~ 471 (471)
++|+||| +||||.|+|+|| + ||||+.+++++.+| ++|+++||+||||||++|+ +.||+|+|.+||+|+
T Consensus 328 ~s~aag~~~dgpg~~~f~q~-~--~~~w~~~~~~l~~~~~~~~~~cq~~k~ill~~g~-~~p~~~~~~~v~vqi 397 (646)
T 2zws_A 328 TSLAAGSTEDGPGPLGLEEG-N--NPFLSALGGLLTGVPPQELVQCQAEKTILADTGN-KKPYPWTPTVLPIQM 397 (646)
T ss_dssp C---------------CCSS-C--CHHHHHTTCSCCCCCCHHHHHHTTTCCEEECCTT-CSSSCSSCSEEEEEE
T ss_pred hhhhcCCcccCCCccccccc-c--chhhhhhhhhhccccchhHHhhccCcceecccCC-CCCcccccceEEEEE
Confidence 9999999 999999999999 4 99999999999998 7999999999999999999 899999999999995
No 2
>1xn9_A 30S ribosomal protein S24E; beta+alpha, GFT structural genomics, protein structure initiative, PSI, NESG, MAR11; NMR {Methanosarcina mazei} SCOP: d.12.1.3
Probab=42.87 E-value=24 Score=29.65 Aligned_cols=32 Identities=22% Similarity=0.164 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 012094 47 VKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (471)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSGPg 80 (471)
-+.+|+++|++.|+ .+++.|+|-.-.||-|-+
T Consensus 31 sk~eirekLAk~~~--~~~~~Vvv~~~~t~fG~g 62 (101)
T 1xn9_A 31 SRNDVRNKLAAMLN--APLELLVIQRIKTEYGMQ 62 (101)
T ss_dssp CHHHHHHHHHHHTT--CCTTTEEEEEEEECSSSS
T ss_pred CHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 46999999999999 899999999999999986
No 3
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=40.10 E-value=1.2e+02 Score=26.12 Aligned_cols=77 Identities=13% Similarity=0.069 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEe---eccCCCCCCCccchhhhcccccchhhHHHHHHHHHHHHHHHHHhcCCceEE
Q 012094 47 VKIKVIERLKARYGDLYTEKNVAISG---IHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGSI 123 (471)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nVlIsA---THTHSGPgg~~~~~l~~i~~~Gf~~~y~~~lvdgIv~AI~~A~~~l~Pa~i 123 (471)
+...+.+.|++..+ .+.+++-|-. +.-|.| . .+....+.-.|-.++-.+.++..|.+++.++....+-+.|
T Consensus 32 lS~~Lid~La~i~~--~~~e~fTle~i~s~~i~~G-~---~MP~VeV~~fgRt~EqK~~la~~IT~av~~~~~~~e~V~V 105 (122)
T 1u9d_A 32 LVPTLLNELSSLLS--TARNAFTFELINTQYFAEG-G---VYPMVEVLWFGREQQTQDQIAQVITDQIRQLLGADSHLAV 105 (122)
T ss_dssp HHHHHHHHHHHHHT--CCGGGCEEEECCCCCCCTT-C---CCCEEEEEESCCCHHHHHHHHHHHHHHHHHHHCTTCCCEE
T ss_pred HhHHHHHHHHHHHC--CCcccEEEEEeeeEEEecC-C---CCCEEEEEEcCCCHHHHHHHHHHHHHHHHHhCCCCceEEE
Confidence 44556677778888 8999886654 445666 2 1223333334557788899999999999998544444666
Q ss_pred EEEEEE
Q 012094 124 FVNKGE 129 (471)
Q Consensus 124 ~~g~g~ 129 (471)
-+..-.
T Consensus 106 if~el~ 111 (122)
T 1u9d_A 106 VFIPLQ 111 (122)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 555433
No 4
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=39.21 E-value=53 Score=30.84 Aligned_cols=49 Identities=18% Similarity=0.312 Sum_probs=33.4
Q ss_pred EEEEEEEeCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCC
Q 012094 20 ARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA 77 (471)
Q Consensus 20 ARAfVl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHS 77 (471)
+.+++|.+ ++.+ |.+|... ..+...++++.|++..+ .+...|+ .||.|.
T Consensus 75 ~N~ylv~~--~~~~--ilIDtg~-~~~~~~~l~~~i~~~~~--~~I~~Ii--~TH~H~ 123 (270)
T 4eyb_A 75 SNGLIVRD--GGRV--LVVDTAW-TDDQTAQILNWIKQEIN--LPVALAV--VTHAHQ 123 (270)
T ss_dssp EEEEEEEE--TTEE--EEESCCS-SHHHHHHHHHHHHHHTC--CCEEEEE--ECSSSH
T ss_pred eEEEEEEE--CCEE--EEEeCCC-CHHHHHHHHHHHHHhcC--CceEEEE--eCCCCh
Confidence 56788876 3444 4468764 55667788888888777 6655555 578875
No 5
>1ywx_A 30S ribosomal protein S24E; GFT MRR16, nesgc, structural genomics, PSI, protein structure initiative; NMR {Methanococcus maripaludis} SCOP: d.12.1.3
Probab=39.20 E-value=30 Score=29.09 Aligned_cols=32 Identities=13% Similarity=0.043 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 012094 47 VKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (471)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSGPg 80 (471)
-+.+|+++|++.|+ .+++.|+|-.-.||-|-+
T Consensus 31 sk~eirekLAk~~~--~~~d~Vvv~~~~T~fG~g 62 (102)
T 1ywx_A 31 SIKDVKMKLVAVLN--ANKQVLVVDTLDQIFGKL 62 (102)
T ss_dssp CHHHHHHHHHHHHT--SCSTTEEEEEEEECSSSS
T ss_pred CHHHHHHHHHHHHC--CCCCEEEEEccEecCCCc
Confidence 46999999999999 899999999999999986
No 6
>2v94_A RPS24, 30S ribosomal protein S24E; ribonucleoprotein; 1.90A {Pyrococcus abyssi} SCOP: d.12.1.3
Probab=38.90 E-value=29 Score=29.43 Aligned_cols=34 Identities=18% Similarity=0.104 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 012094 45 QIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (471)
Q Consensus 45 ~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSGPg 80 (471)
..-+.+|+++|++.|+ .+++.|+|-.-.||-|=+
T Consensus 38 tpsk~eirekLA~~~~--~~~d~Vvv~~~~T~fG~g 71 (107)
T 2v94_A 38 TPSRKDVKGKLVAMLD--LNPETTVIQYIRSYFGSY 71 (107)
T ss_dssp CCCHHHHHHHHHHHHT--CCGGGEEEEEEECCTTCS
T ss_pred CCCHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 3347999999999999 899999999999999986
No 7
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=38.59 E-value=1.3e+02 Score=24.33 Aligned_cols=85 Identities=13% Similarity=0.078 Sum_probs=55.6
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCC-CCCCCcc-chhhhcccc-cchhhHHHHHHHHHHHHHHHHHhcCCc
Q 012094 44 SQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA-GPGGYLQ-YVVYIVTSL-GFVRQSFDALVDGIEKSVLQAHENLRP 120 (471)
Q Consensus 44 ~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHS-GPgg~~~-~~l~~i~~~-Gf~~~y~~~lvdgIv~AI~~A~~~l~P 120 (471)
...+.+++-+.|.+.+| .|++.|++.-..... .++|... ..+.++... |..++--+.+...|.+++.+.+ ...|
T Consensus 16 ~~~l~~~~~~~l~~~lg--kp~~~~~v~~~~~~~~~~~g~~~~~~~v~i~~~~g~t~eqk~~l~~~i~~~l~~~l-gi~~ 92 (115)
T 2xcz_A 16 ANSLLQELSSKLAELLG--KPEKYVMTSLQCGVPMTFSGNTEPTCYVEVKSIGALDGSRTQEVSELVCGHIEQNL-GIPA 92 (115)
T ss_dssp HHHHHHHHHHHHHHHHT--CCGGGCEEEEECSCCCCBTTBCSSCEEEEEEESSCCCTTHHHHHHHHHHHHHHHHH-CCCG
T ss_pred HHHHHHHHHHHHHHHHC--CChHHEEEEEECCCceEECCCCCcEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHh-CcCc
Confidence 45677888888889999 999988888543221 2333221 122234333 4667777888888888888765 6777
Q ss_pred eEEEEEEEEec
Q 012094 121 GSIFVNKGELL 131 (471)
Q Consensus 121 a~i~~g~g~~~ 131 (471)
-++.+.-.+.+
T Consensus 93 ~~v~I~~~e~~ 103 (115)
T 2xcz_A 93 DRIYIGFEDVP 103 (115)
T ss_dssp GGEEEEEEECC
T ss_pred ccEEEEEEECC
Confidence 66666666654
No 8
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=32.84 E-value=55 Score=26.76 Aligned_cols=50 Identities=8% Similarity=0.004 Sum_probs=36.0
Q ss_pred EEEEeCCCCEEEEEEeccCc-ccHH----HHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 012094 23 FIVAEPQGNRVVFVNLDACM-ASQI----VKIKVIERLKARYGDLYTEKNVAISGIHT 75 (471)
Q Consensus 23 fVl~d~~~~rvv~Vs~Dl~~-i~~~----v~~~V~~~L~~~~G~~i~~~nVlIsATHT 75 (471)
+++.. .....++|.+.+.. ...+ +..++-+.|++.+| +++++|.|.-+-.
T Consensus 48 ~~~~g-~~~~~~~v~i~~~~g~~~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 102 (115)
T 1uiz_A 48 MSFGD-STDPCAVCSLCSIGKIGGPQNKSYTKLLCDILTKQLN--IPANRVYINYYDL 102 (115)
T ss_dssp EEETT-BCSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEEEC
T ss_pred eEECC-CCCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEEEEEC
Confidence 34443 35678899988775 5555 56666777788899 9999999976543
No 9
>2g1d_A 30S ribosomal protein S24E; complete proteome, ribosome; NMR {Thermoplasma acidophilum} SCOP: d.12.1.3
Probab=32.26 E-value=24 Score=29.49 Aligned_cols=33 Identities=12% Similarity=0.128 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 012094 46 IVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (471)
Q Consensus 46 ~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSGPg 80 (471)
.-+.+|+++|++.|+ .+++.|+|-.-.||-|=+
T Consensus 31 psk~eirekLA~~~~--~~~~~vvv~~~~t~fG~g 63 (98)
T 2g1d_A 31 PSREEIKELIAKHEG--VDKELVIVDNNKQLTGKH 63 (98)
T ss_dssp CCHHHHHHHHHHHHH--SCSTTEECCCCCCCSSSS
T ss_pred CCHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 347999999999999 899999999999999986
No 10
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=32.10 E-value=58 Score=26.47 Aligned_cols=50 Identities=14% Similarity=0.171 Sum_probs=36.1
Q ss_pred EEEEeCCCCEEEEEEeccCc-ccHH----HHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 012094 23 FIVAEPQGNRVVFVNLDACM-ASQI----VKIKVIERLKARYGDLYTEKNVAISGIHT 75 (471)
Q Consensus 23 fVl~d~~~~rvv~Vs~Dl~~-i~~~----v~~~V~~~L~~~~G~~i~~~nVlIsATHT 75 (471)
+++.. .....++|.+.+.. ...+ +..++-+.|++.+| +++++|+|.-+-.
T Consensus 47 ~~~~g-~~~~~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 101 (113)
T 1hfo_A 47 LSFGG-STNPAAFGTLMSIGGIEPSRNRDHSAKLFDHLNTKLG--IPKNRMYIHFVNL 101 (113)
T ss_dssp EEETT-BCSSCEEEEEEESSSCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEEEC
T ss_pred EEecC-CCCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhC--cCcCeEEEEEEEC
Confidence 44544 34678898888765 5555 56667777788899 9999999976543
No 11
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=29.81 E-value=97 Score=28.83 Aligned_cols=51 Identities=12% Similarity=0.276 Sum_probs=31.2
Q ss_pred eEEEEEEEEeCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCC
Q 012094 18 LRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA 77 (471)
Q Consensus 18 L~ARAfVl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHS 77 (471)
....+++|+. +.+. |-+|...- ......+.+.|++..| ++.+. |--||.|.
T Consensus 66 ~~~n~~li~~--~~~~--iLID~G~~-~~~~~~l~~~l~~~~g--~~i~~--VilTH~H~ 116 (265)
T 2y8b_A 66 YSSNGLIVRD--ADEL--LLIDTAWG-AKNTVALLAEIEKQIG--LPVTR--SISTHFHD 116 (265)
T ss_dssp EEEEEEEEEE--TTEE--EEESCCSS-HHHHHHHHHHHHHHTC--SCEEE--EECSSSSH
T ss_pred ccceEEEEEE--CCeE--EEEeCCCC-HHHHHHHHHHHHHhcC--CCeEE--EEeCCCCh
Confidence 3567788876 3443 34688753 3345667778877557 54444 44577774
No 12
>3u5c_Y RP50, 40S ribosomal protein S24-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_U* 3j16_D 3u5g_Y
Probab=28.31 E-value=34 Score=30.18 Aligned_cols=32 Identities=28% Similarity=0.404 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 012094 47 VKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (471)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSGPg 80 (471)
-+.+|++.|++.|+ .+++.|+|-.-.||-|-+
T Consensus 36 sr~eIrekLAk~y~--~~~d~VvV~g~rT~fG~g 67 (135)
T 3u5c_Y 36 SKDELREKLAEVYK--AEKDAVSVFGFRTQFGGG 67 (135)
T ss_dssp CHHHHHHHHHTTTT--SCGGGEEEEEEEECTTSS
T ss_pred CHHHHHHHHHHHHC--CCCCEEEEEeeEeccCCc
Confidence 37999999999999 899999999999999986
No 13
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=28.27 E-value=1.3e+02 Score=28.29 Aligned_cols=52 Identities=13% Similarity=0.235 Sum_probs=34.6
Q ss_pred EEEEEEEEeCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcE-EEEeeccCC
Q 012094 19 RARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNV-AISGIHTHA 77 (471)
Q Consensus 19 ~ARAfVl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nV-lIsATHTHS 77 (471)
.+.+++|++ +.. .+.+|.+.-.......+.+.|++ .| ++...| .|--||.|.
T Consensus 21 ~~n~~li~~--~~~--~ilID~G~~~~~~~~~l~~~l~~-~g--~~~~~i~~Vi~TH~H~ 73 (317)
T 2zo4_A 21 TVNLYLLQG--AGE--VALVDTALGTRAARGALELHLAE-LG--LCFQDVKTILLTHHHP 73 (317)
T ss_dssp EEEEEEEEE--TTE--EEEECCCCSSHHHHHHHHHHHHH-TT--CCGGGCCEEEESCCSH
T ss_pred cEEEEEEEc--CCc--eEEEECCCCCHHHHHHHHHHHHH-cC--CChhhcCEEEEcCCCC
Confidence 577888886 333 35679988776666677777776 67 653443 455578774
No 14
>2xzm_P RPS24E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_P
Probab=27.74 E-value=55 Score=29.32 Aligned_cols=32 Identities=31% Similarity=0.434 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 012094 47 VKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (471)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSGPg 80 (471)
-+.+|++.|++.|+ .+++.|+|-.-.||-|-+
T Consensus 34 Sk~eIrekLAkmy~--~~~d~VvV~g~rT~fGgg 65 (149)
T 2xzm_P 34 SKEKIREELAKQLK--VDARNVVVYGFSTQYGGG 65 (149)
T ss_dssp CHHHHHHHHHHHHT--CCGGGEEEEEECCCSSSS
T ss_pred CHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 36899999999999 899999999999999986
No 15
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=27.64 E-value=1.3e+02 Score=27.03 Aligned_cols=51 Identities=12% Similarity=0.165 Sum_probs=31.8
Q ss_pred EEEEEEEEeCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCC
Q 012094 19 RARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA 77 (471)
Q Consensus 19 ~ARAfVl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHS 77 (471)
...+++|.. ++.+. |-+|.+. .......+.+.|++.++ ...+.|--||.|.
T Consensus 29 ~~n~~li~~-~~~~~--iLiD~G~-~~~~~~~l~~~l~~~~~----~~~~~vi~TH~H~ 79 (246)
T 2fhx_A 29 SSNVLVAKM-LDGTV--VIVSSPF-ENLGTQTLMDWVAKTMK----PKKVVAINTHFHL 79 (246)
T ss_dssp TEEEEEEEC-TTSEE--EEESCCS-SHHHHHHHHHHHHHHHC----CSEEEEECCSSSH
T ss_pred CCCEEEEEe-CCCeE--EEEeCCC-CHHHHHHHHHHHHHhcC----CCcEEEEeCCCCc
Confidence 467888876 34444 3468654 34445667777877556 3345566899885
No 16
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=26.30 E-value=74 Score=26.18 Aligned_cols=49 Identities=10% Similarity=0.025 Sum_probs=36.1
Q ss_pred EEEEEeCCCCEEEEEEeccCcc-cH----HHHHHHHHHHHHHhCCCCCCCcEEEEee
Q 012094 22 TFIVAEPQGNRVVFVNLDACMA-SQ----IVKIKVIERLKARYGDLYTEKNVAISGI 73 (471)
Q Consensus 22 AfVl~d~~~~rvv~Vs~Dl~~i-~~----~v~~~V~~~L~~~~G~~i~~~nVlIsAT 73 (471)
.+.+.. .....+++.+-.++. .. .+..++-+.|++++| ++.++|.|.-.
T Consensus 46 ~m~fgG-s~~P~a~~~v~sig~~~~~~n~~~s~~i~~~l~~~Lg--i~~~riyI~f~ 99 (114)
T 3djh_A 46 LMAFGG-SSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLAERLR--ISPDRVYINYY 99 (114)
T ss_dssp EEEETT-BCSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEE
T ss_pred eEEEcC-cCCCEEEEEEEEccCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEEEE
Confidence 345543 357889999987765 43 456777788889999 99999999753
No 17
>1axh_A Atracotoxin-HVI, ACTX-HVI; neurotoxin, insecticidal toxin, cystine knot, funnel-WEB; NMR {Hadronyche versuta} SCOP: g.3.6.2
Probab=25.68 E-value=29 Score=23.79 Aligned_cols=19 Identities=42% Similarity=1.036 Sum_probs=15.9
Q ss_pred CcccCCCCCCCCCCCCCCC
Q 012094 302 AFCIDSGLPCDFNHSTCGG 320 (471)
Q Consensus 302 ~~c~~~g~~c~~~~s~c~g 320 (471)
+-|+-+|.||-++.+-|.|
T Consensus 2 ~~C~psgQPCpyne~CCs~ 20 (37)
T 1axh_A 2 PTCIPSGQPCPYNENCCSQ 20 (37)
T ss_dssp CCSBCTTSBCSSGGGBSSS
T ss_pred CccccCCCcCCCccccccc
Confidence 4589999999999997764
No 18
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=25.37 E-value=65 Score=26.93 Aligned_cols=44 Identities=16% Similarity=0.160 Sum_probs=32.0
Q ss_pred CCEEEEEEeccCc-ccH----HHHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 012094 30 GNRVVFVNLDACM-ASQ----IVKIKVIERLKARYGDLYTEKNVAISGIHT 75 (471)
Q Consensus 30 ~~rvv~Vs~Dl~~-i~~----~v~~~V~~~L~~~~G~~i~~~nVlIsATHT 75 (471)
....++|.+.+.. ... .+..++-+.|++.+| ++.++|+|.-+-.
T Consensus 54 ~dp~~~v~I~~~~g~t~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 102 (125)
T 2wkb_A 54 NEGYCFVRLTSIGGINRSNNSLLADKITKILSNHLS--VKPRRVYIEFRDC 102 (125)
T ss_dssp CSSCEEEEEECC-----CTHHHHHHHHHHHHHHHHC--CCGGGEEEEEEC-
T ss_pred CCCcEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEEEEEC
Confidence 4677888888765 333 467778888889999 9999999987544
No 19
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=24.19 E-value=55 Score=28.14 Aligned_cols=44 Identities=14% Similarity=0.126 Sum_probs=36.0
Q ss_pred CCEEEEEEeccCccc-----HHHHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 012094 30 GNRVVFVNLDACMAS-----QIVKIKVIERLKARYGDLYTEKNVAISGIHT 75 (471)
Q Consensus 30 ~~rvv~Vs~Dl~~i~-----~~v~~~V~~~L~~~~G~~i~~~nVlIsATHT 75 (471)
....++|.+-.++.- ..+..++-+.|++++| |+.++|+|.-+=.
T Consensus 75 ~dP~a~v~i~sig~~~~e~n~~~s~~i~~~l~~~Lg--I~~~riyI~f~d~ 123 (133)
T 3fwu_A 75 TDPVACVRVEALGGYGPSEPEKVTSIVTAAITKECG--IVADRIFVLYFSP 123 (133)
T ss_dssp CSSCEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHC--CCGGGEEEEEECC
T ss_pred CCCEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhC--cChhhEEEEEEEH
Confidence 467899998876542 3677888889999999 9999999987665
No 20
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=22.92 E-value=3.5e+02 Score=22.89 Aligned_cols=87 Identities=11% Similarity=0.012 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC---CCc-cchhhhcccc-cchhhHHHHHHHHHHHHHHHHHhcCC
Q 012094 45 QIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG---GYL-QYVVYIVTSL-GFVRQSFDALVDGIEKSVLQAHENLR 119 (471)
Q Consensus 45 ~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSGPg---g~~-~~~l~~i~~~-Gf~~~y~~~lvdgIv~AI~~A~~~l~ 119 (471)
..+..++-+.|++.+| -|++.|+|+-.+ ..+- |-. ...+-++... +..++.-+.+...|.+.+.+. -...
T Consensus 38 ~~l~~~ls~~la~~lg--KPe~~v~V~~~~--~~~m~fgGs~dP~a~v~v~sig~~~~e~n~~~s~~i~~~l~~~-LgI~ 112 (133)
T 3fwt_A 38 ANLSAAYGMICREELG--KPEDFVMTAFSD--KTPISFQGSTAPAAYVRVESWGEYAPSKPKMMTPRIAAAITKE-CGIP 112 (133)
T ss_dssp HHHHHHHHHHHHHHHS--CTTCCCEEEEEC--SCCCCBTTBCSSCEEEEEEEEECCCTHHHHHHHHHHHHHHHHH-HCCC
T ss_pred HHHHHHHHHHHHHHhC--cCcCEEEEEEEC--CceEEECCCCCCeEEEEEEECCCCCHHHHHHHHHHHHHHHHHH-hCcC
Confidence 5577778888888899 888888886643 3331 111 1122244443 356676777777777777664 4778
Q ss_pred ceEEEEEEEEecccccc
Q 012094 120 PGSIFVNKGELLDASIS 136 (471)
Q Consensus 120 Pa~i~~g~g~~~~~~~N 136 (471)
|-++++.-.++++.+.|
T Consensus 113 ~~rvyI~f~d~~~wg~n 129 (133)
T 3fwt_A 113 AERIYVFYYSTKHCGWN 129 (133)
T ss_dssp GGGEEEEEEEESCCEET
T ss_pred hhhEEEEEEEhhhEeEC
Confidence 88888877777555444
No 21
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=21.77 E-value=2.2e+02 Score=23.01 Aligned_cols=85 Identities=12% Similarity=0.123 Sum_probs=55.0
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCC-CCCCCcc-chhhhcccc-cchhhHHHHHHHHHHHHHHHHHhcCCc
Q 012094 44 SQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA-GPGGYLQ-YVVYIVTSL-GFVRQSFDALVDGIEKSVLQAHENLRP 120 (471)
Q Consensus 44 ~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHS-GPgg~~~-~~l~~i~~~-Gf~~~y~~~lvdgIv~AI~~A~~~l~P 120 (471)
...+.+++-+.|.+.+| .|++.+++.-.+... -.+|... ..+.++... |..++--+.+...|.+++.+.+ ...|
T Consensus 16 ~~~l~~~~~~~l~~~lg--kP~~~~~v~~~~~~~~~~~g~~~~~~~v~i~~~~g~~~eqk~~l~~~i~~~l~~~l-gi~~ 92 (115)
T 1uiz_A 16 PDTLLSDLTKQLAKATG--KPAEYIAIHIVPDQIMSFGDSTDPCAVCSLCSIGKIGGPQNKSYTKLLCDILTKQL-NIPA 92 (115)
T ss_dssp CTTHHHHHHHHHHHHHT--CCGGGCEEEEECSCEEEETTBCSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHH-CCCG
T ss_pred HHHHHHHHHHHHHHHHC--cChhHEEEEEECCcceEECCCCCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHh-CcCc
Confidence 45678888899999999 999988887754221 1122211 122234333 4677777888888888887754 6667
Q ss_pred eEEEEEEEEec
Q 012094 121 GSIFVNKGELL 131 (471)
Q Consensus 121 a~i~~g~g~~~ 131 (471)
-++.+.-.+.+
T Consensus 93 ~~v~I~~~e~~ 103 (115)
T 1uiz_A 93 NRVYINYYDLN 103 (115)
T ss_dssp GGEEEEEEECC
T ss_pred ceEEEEEEECC
Confidence 66666655554
No 22
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=21.70 E-value=1.2e+02 Score=27.85 Aligned_cols=56 Identities=13% Similarity=0.198 Sum_probs=36.4
Q ss_pred ecceEEEEEEEEeCCCCEEEEEEeccCcccHHH-------------HHHHHHHHHHHhCCCCCCCcE-EEEeeccCC
Q 012094 15 HFRLRARTFIVAEPQGNRVVFVNLDACMASQIV-------------KIKVIERLKARYGDLYTEKNV-AISGIHTHA 77 (471)
Q Consensus 15 hdrL~ARAfVl~d~~~~rvv~Vs~Dl~~i~~~v-------------~~~V~~~L~~~~G~~i~~~nV-lIsATHTHS 77 (471)
..++...+++|+. ++ + .|-+|.+.-.... ...+.+.|++ .| ++.+.| .|--||.|.
T Consensus 30 ~~~~~~~~~li~~-~~-~--~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g--~~~~~i~~VilTH~H~ 99 (274)
T 3aj3_A 30 EVRFPVYSILIEH-AE-G--RFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALGL-LG--LEPRDIDVVVNSHFHF 99 (274)
T ss_dssp EEEEEEEEEEEEE-TT-E--EEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHHH-TT--CCGGGCCEEECSCCSG
T ss_pred EEEeeEEEEEEEe-CC-c--cEEEECCCCcccccCccccCCcccCccccHHHHHHH-cC--CCHHHCCEEEecCcCc
Confidence 3467788999987 33 3 3567988765431 3456777766 67 765555 566788885
No 23
>1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B*
Probab=21.10 E-value=1.5e+02 Score=33.00 Aligned_cols=107 Identities=12% Similarity=0.113 Sum_probs=65.0
Q ss_pred EEEEEEEEeCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCCCCccchhhhccccc-chh
Q 012094 19 RARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLG-FVR 97 (471)
Q Consensus 19 ~ARAfVl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSGPgg~~~~~l~~i~~~G-f~~ 97 (471)
++.|.|--+++| -+.|..-..-+.|.....+.+.+++.+| ++.++|-|..+-|...|.+...+---.....| -..
T Consensus 506 ~~~a~v~l~~DG--~v~v~~g~~e~GqG~~T~~aQiaAe~LG--ip~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~ 581 (809)
T 1n62_B 506 FDSAEIRIHPTG--SVIARMGTKSQGQGHETTYAQIIATELG--IPADDIMIEEGNTDTAPYGLGTYGSRSTPTAGAATA 581 (809)
T ss_dssp CEEEEEEECTTS--CEEEEESCCCSSSCHHHHHHHHHHHHHT--CCGGGEEEECCBTTTSCCCCCSCTTCTTTTHHHHHH
T ss_pred cccEEEEEecCC--eEEEEECCCCCCCCHHHHHHHHHHHHhC--CCHHHEEEecCCCCCCCCCCCcccchHHHHHHHHHH
Confidence 344444433223 3666777788888888999999999999 99999999999999888543221111111111 344
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCceEEEEEEEEe
Q 012094 98 QSFDALVDGIEKSVLQAHENLRPGSIFVNKGEL 130 (471)
Q Consensus 98 ~y~~~lvdgIv~AI~~A~~~l~Pa~i~~g~g~~ 130 (471)
.-.+.|.+++.+.....+ ...|-.|.+..|.+
T Consensus 582 ~Aa~~l~~~l~~~aa~~l-~~~~~~l~~~~g~v 613 (809)
T 1n62_B 582 VAARKIKAKAQMIAAHML-EVHEGDLEWDVDRF 613 (809)
T ss_dssp HHHHHHHHHHHHHHHHHH-TSCGGGEEECSSEE
T ss_pred HHHHHHHHHHHHHHHHHh-CCCHHHEEEeCCEE
Confidence 455566666655444332 34455555544443
No 24
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=20.96 E-value=1.1e+02 Score=25.12 Aligned_cols=44 Identities=14% Similarity=0.101 Sum_probs=33.7
Q ss_pred CCEEEEEEeccCc-ccHH----HHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 012094 30 GNRVVFVNLDACM-ASQI----VKIKVIERLKARYGDLYTEKNVAISGIHT 75 (471)
Q Consensus 30 ~~rvv~Vs~Dl~~-i~~~----v~~~V~~~L~~~~G~~i~~~nVlIsATHT 75 (471)
....++|.+.+.. ...+ +..++-+.|++.+| +++++|.|.-+-.
T Consensus 54 ~~~~~~i~I~~~~g~~~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 102 (119)
T 2os5_A 54 RNPVAVIKVESIGALSADDNIRHTQKITQFCQDTLK--LPKDKVIITYFDL 102 (119)
T ss_dssp CSSCEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEEEC
T ss_pred CCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhC--cCcccEEEEEEEC
Confidence 4578899998775 5555 56666777788899 9999999987654
No 25
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=20.63 E-value=1.1e+02 Score=27.05 Aligned_cols=52 Identities=17% Similarity=0.243 Sum_probs=30.6
Q ss_pred eEEEEEEEEeCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCC
Q 012094 18 LRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAG 78 (471)
Q Consensus 18 L~ARAfVl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSG 78 (471)
+.+.+++|.. + .+.+ -+|.+.-. .....+.+.|.+..+ .+.+.| --||.|.=
T Consensus 29 ~~~n~~li~~-~-~~~i--LiD~G~~~-~~~~~~~~~l~~~~~--~~i~~i--i~TH~H~D 80 (219)
T 3l6n_A 29 YSANSMYLVT-K-KGVV--LFDVPWEK-VQYQSLMDTIKKRHN--LPVVAV--FATHSHDD 80 (219)
T ss_dssp EEEEEEEEEE-T-TEEE--EESCCSSG-GGHHHHHHHHHHHHS--CCEEEE--ECSSSSTT
T ss_pred ccceEEEEEe-C-CEEE--EEeCCCCh-HHHHHHHHHHHHhcC--CceeEE--EecCCCcc
Confidence 4568888887 3 3433 36887532 234566677776555 334444 45787763
No 26
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=20.09 E-value=1e+02 Score=24.96 Aligned_cols=39 Identities=15% Similarity=0.192 Sum_probs=0.0
Q ss_pred CEEEEEEeccCc-----ccHHHHHHHHHHHHHHhCCCCCCCcEEEE
Q 012094 31 NRVVFVNLDACM-----ASQIVKIKVIERLKARYGDLYTEKNVAIS 71 (471)
Q Consensus 31 ~rvv~Vs~Dl~~-----i~~~v~~~V~~~L~~~~G~~i~~~nVlIs 71 (471)
...++|.+.+.. --..+..++-+.|++.+| +++++|+|.
T Consensus 55 ~~~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~ 98 (112)
T 3b64_A 55 DPVACVRVEALGGYGPSEPEKVTSIVTAAITKECG--IVADRIFVL 98 (112)
T ss_dssp SSCEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHC--CCGGGEEEE
T ss_pred CCEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEE
Done!